BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008014
(581 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255551247|ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223544165|gb|EEF45689.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 565
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/457 (77%), Positives = 387/457 (84%), Gaps = 13/457 (2%)
Query: 116 AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRV---ASSSRCAHRSKWDDHVINTPYHF 172
AA R+KP + QFRY + +YMHAG S+S C HR+KWDDH NTPYHF
Sbjct: 2 AAVFRAKP----SKETAFYQFRYFIFNYMHAGGAIMSTSTSYCTHRNKWDDHFSNTPYHF 57
Query: 173 TSFRPVSLRGELVEKGSQLCTDNAKCQKLTGGSSSITSSYGDPPEVWQPPGDGIA-VRVN 231
TSF+PVSLRGE +EKG+QL + + SS S+YGDPPEVWQPPGDGIA VRV+
Sbjct: 58 TSFKPVSLRGEFIEKGNQLLDNKRNWSEKLKNSSGGGSNYGDPPEVWQPPGDGIATVRVS 117
Query: 232 GQGPNLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSV 291
VRGG G GS SKDGCWGGS+LGN FPTPKEIC+GLDKFVIGQ+RAKKVLSV
Sbjct: 118 E-----VRGGEGRGGPGSNSKDGCWGGSDLGNNFPTPKEICRGLDKFVIGQDRAKKVLSV 172
Query: 292 AVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLA 351
AVYNHY RIY++S QK SAG+S + + +D+D VELEKSNILLMGPTGSGKTLLAKTLA
Sbjct: 173 AVYNHYKRIYHDSIQKWSAGDSGNNKAEAMDEDGVELEKSNILLMGPTGSGKTLLAKTLA 232
Query: 352 RYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKA 411
R+VNVPFVIADATTLTQAGYVGEDVESILYKLL +DYNVAAAQQGIVYIDEVDKITKKA
Sbjct: 233 RFVNVPFVIADATTLTQAGYVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKA 292
Query: 412 ESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVD 471
ES+NISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAF+D
Sbjct: 293 ESVNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFID 352
Query: 472 IEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRF 531
+EKTISERRQDSSIGFGAPVRANMR G VT A VTSSL+ETVES DLI+YGLIPEFVGRF
Sbjct: 353 LEKTISERRQDSSIGFGAPVRANMRMGSVTSAAVTSSLLETVESGDLISYGLIPEFVGRF 412
Query: 532 PVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNG 568
PVLVSL ALTENQLVQVLTEPKNALGKQY+KMFQMNG
Sbjct: 413 PVLVSLSALTENQLVQVLTEPKNALGKQYKKMFQMNG 449
>gi|297792705|ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata]
gi|297310072|gb|EFH40496.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/462 (75%), Positives = 378/462 (81%), Gaps = 20/462 (4%)
Query: 116 AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVINTPYHFTSF 175
AAALRS + T SLT+SQFRY + +H R A+S +C HRSK + + + F
Sbjct: 2 AAALRSNTSRE-TASLTLSQFRYFFFNRIHTARTATSPQCNHRSKSPNKISSLGTSFLDN 60
Query: 176 RPVSLRGELVEKGSQLCTDNAKCQKLTGGSSSIT--SSYGDPPEVWQPPGDGIAVRVNGQ 233
R R T+ QKL G SS+ SS GDPP++WQPPGDG++VRVNG
Sbjct: 61 RGGERRN---------STNCYASQKLNGVGSSVVMLSSQGDPPDLWQPPGDGVSVRVNGS 111
Query: 234 GPNLVRGGGSGSGF--------GSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERA 285
NL RGGG G GS SK+ CWGGSNLG+ FPTPKEICKGL+KFVIGQERA
Sbjct: 112 SVNLGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERA 171
Query: 286 KKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTL 345
KKVLSVAVYNHY RIY+ESSQKRSAGE+ S DDD VELEKSNILLMGPTGSGKTL
Sbjct: 172 KKVLSVAVYNHYKRIYHESSQKRSAGETDSTAVKPADDDMVELEKSNILLMGPTGSGKTL 231
Query: 346 LAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVD 405
LAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+DYNVAAAQQGIVYIDEVD
Sbjct: 232 LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVD 291
Query: 406 KITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFIC 465
KITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILFIC
Sbjct: 292 KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC 351
Query: 466 GGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIP 525
GGAFVDIEKTISERR DSSIGFGAPVRANMRAGGVT+A V S+LMETVESSDLIAYGLIP
Sbjct: 352 GGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIP 411
Query: 526 EFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
EFVGRFPVLVSL ALTENQL+QVLTEPKNALGKQY+KM+QMN
Sbjct: 412 EFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMN 453
>gi|18423503|ref|NP_568792.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
gi|9759182|dbj|BAB09797.1| ATP-dependent Clp protease regulatory subunit CLPX [Arabidopsis
thaliana]
gi|14334860|gb|AAK59608.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
[Arabidopsis thaliana]
gi|23296603|gb|AAN13130.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
[Arabidopsis thaliana]
gi|332008960|gb|AED96343.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
Length = 579
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/465 (76%), Positives = 383/465 (82%), Gaps = 19/465 (4%)
Query: 116 AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSS-RCAHRSKWDDHVINTPYHFTS 174
AAALRS + T SLT+S FRY + + +H R A+S C HRSK D+ PY +S
Sbjct: 2 AAALRSNTSRE-TASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKF---PYKISS 57
Query: 175 FRPVSL--RGELVEKGSQLCTDNAKCQKLTGGSSS--ITSSYGDPPEVWQPPGDGIAVRV 230
L RG + S C A +KL+G SS I SS GDPP++WQPPGDG++VRV
Sbjct: 58 LGTSFLDNRGGGERRNSTKCY--AAQKKLSGVGSSVVILSSQGDPPDLWQPPGDGVSVRV 115
Query: 231 NGQGPNLVRGGGSGSGF--------GSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQ 282
NG NL RGGG G GS SK+ CWGGSNLG+ FPTPKEICKGL+KFVIGQ
Sbjct: 116 NGSSVNLGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQ 175
Query: 283 ERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSG 342
ERAKKVLSVAVYNHY RIY+ESSQKRSAGE+ S DDD VELEKSNILLMGPTGSG
Sbjct: 176 ERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSG 235
Query: 343 KTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYID 402
KTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+DYNVAAAQQGIVYID
Sbjct: 236 KTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYID 295
Query: 403 EVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDIL 462
EVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDIL
Sbjct: 296 EVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDIL 355
Query: 463 FICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYG 522
FICGGAFVDIEKTISERR DSSIGFGAPVRANMRAGGVT+A V S+LMETVESSDLIAYG
Sbjct: 356 FICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYG 415
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
LIPEFVGRFPVLVSL ALTENQL+QVLTEPKNALGKQY+KM+QMN
Sbjct: 416 LIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMN 460
>gi|225455378|ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Vitis vinifera]
Length = 583
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/478 (73%), Positives = 391/478 (81%), Gaps = 24/478 (5%)
Query: 116 AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVI---NTPYHF 172
AAALRSK ++ T LT SQFRY +L++MHAGR+ +S +H+ D H +TPYHF
Sbjct: 2 AAALRSK-SSRETALLTFSQFRYFILNHMHAGRLPNS-YISHKPNCD-HCFTHSHTPYHF 58
Query: 173 TSFRPVSLRGELVEKGSQLCTDNAKCQKLTGGSS--------SITSSYGDPPEVWQPPGD 224
TSF+PVSLRGELV+KG + DN + K+ ++ +I +S+GDPPEVW GD
Sbjct: 59 TSFKPVSLRGELVDKGLEFF-DNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GD 115
Query: 225 GIAVRVNGQGPNLVRGGGSGSGFGSGS-------KDGCWGGSNLGNKFPTPKEICKGLDK 277
GI VR G G NLVRGGG G KD WGGSNLG+ FPTPKEIC+GLDK
Sbjct: 116 GIVVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDK 175
Query: 278 FVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMG 337
FVIGQERAKKVLSVAVYNHY RIY++S QK A ++S + D+D+VELEKSNILLMG
Sbjct: 176 FVIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMG 235
Query: 338 PTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQG 397
PTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLL V+DYNVAAAQQG
Sbjct: 236 PTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQG 295
Query: 398 IVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID 457
IVYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID
Sbjct: 296 IVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID 355
Query: 458 TKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSD 517
TKDILFICGGAF+D+EKTISERRQDSSIGFGAPVRANMR GG TDA V SSL+ETVESSD
Sbjct: 356 TKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSD 415
Query: 518 LIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGQAAFYGK 575
LI+YGLIPEFVGRFP+LVSL ALTENQLV+VLTEPKNALGKQY+KMFQMNG + K
Sbjct: 416 LISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTK 473
>gi|2674203|gb|AAB88706.1| CLP protease regulatory subunit CLPX [Arabidopsis thaliana]
Length = 579
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/465 (75%), Positives = 380/465 (81%), Gaps = 19/465 (4%)
Query: 116 AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSS-RCAHRSKWDDHVINTPYHFTS 174
AAALRS + T SLT+S FRY + + +H R A+S C HRSK D+ PY +S
Sbjct: 2 AAALRSNTSRE-TASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKF---PYKISS 57
Query: 175 FRPVSL--RGELVEKGSQLCTDNAKCQKLTGGSSS--ITSSYGDPPEVWQPPGDGIAVRV 230
L RG + S C A +KL+G SS I SS GDPP++WQPPGDG++VRV
Sbjct: 58 LGTSFLDNRGGGERRNSTKCY--AAQKKLSGVGSSVVILSSQGDPPDLWQPPGDGVSVRV 115
Query: 231 NGQGPNLVRGGGSGSGFG--------SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQ 282
NG NL RGGG G S SK+ CWGGSNLG+ FPTPKEICKGL+KFVIGQ
Sbjct: 116 NGSSVNLGRGGGGGGSNPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQ 175
Query: 283 ERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSG 342
ERAKKVLSVAVYNHY RIY+ESSQKRSAGE+ S DDD VELEKSNILLMGPTGSG
Sbjct: 176 ERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSG 235
Query: 343 KTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYID 402
KTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+DYNVAAAQQGIVYID
Sbjct: 236 KTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYID 295
Query: 403 EVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDIL 462
EVDKITKKAESL ISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDIL
Sbjct: 296 EVDKITKKAESLYISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDIL 355
Query: 463 FICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYG 522
FICGGAFVDIEKTISERR DSSIGFGAPVRANMRAGGVT A V S+LMETVE+SDLIAYG
Sbjct: 356 FICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTTAAVASNLMETVETSDLIAYG 415
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
LIPEFVGRFPVLVSL ALTENQL+QVLTEPKNALGKQY+KM+QMN
Sbjct: 416 LIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMN 460
>gi|302143904|emb|CBI23009.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/478 (73%), Positives = 390/478 (81%), Gaps = 24/478 (5%)
Query: 116 AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVI---NTPYHF 172
AAALRSK ++ T LT SQFRY +L++MHAGR+ +S +H+ D H +TPYHF
Sbjct: 2 AAALRSK-SSRETALLTFSQFRYFILNHMHAGRLPNS-YISHKPNCD-HCFTHSHTPYHF 58
Query: 173 TSFRPVSLRGELVEKGSQLCTDNAKCQKLTGGSS--------SITSSYGDPPEVWQPPGD 224
TSF+PVSLRGELV+KG + DN + K+ ++ +I +S+GDPPEVW GD
Sbjct: 59 TSFKPVSLRGELVDKGLEFF-DNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GD 115
Query: 225 GIAVRVNGQGPNLVRGGGSGSGFGSGS-------KDGCWGGSNLGNKFPTPKEICKGLDK 277
GI VR G G NLVRGGG G KD WGGSNLG+ FPTPKEIC+GLDK
Sbjct: 116 GIVVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDK 175
Query: 278 FVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMG 337
FVIGQERAKKVLSVAVYNHY RIY++S QK A ++S + D+D+VELEKSNILLMG
Sbjct: 176 FVIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMG 235
Query: 338 PTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQG 397
PTGSGKTLLAKTLAR+VNVPFVIADATTLTQA YVGEDVESILYKLL V+DYNVAAAQQG
Sbjct: 236 PTGSGKTLLAKTLARFVNVPFVIADATTLTQARYVGEDVESILYKLLMVADYNVAAAQQG 295
Query: 398 IVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID 457
IVYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID
Sbjct: 296 IVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID 355
Query: 458 TKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSD 517
TKDILFICGGAF+D+EKTISERRQDSSIGFGAPVRANMR GG TDA V SSL+ETVESSD
Sbjct: 356 TKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSD 415
Query: 518 LIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGQAAFYGK 575
LI+YGLIPEFVGRFP+LVSL ALTENQLV+VLTEPKNALGKQY+KMFQMNG + K
Sbjct: 416 LISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTK 473
>gi|359490703|ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Vitis vinifera]
Length = 577
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/478 (73%), Positives = 387/478 (80%), Gaps = 30/478 (6%)
Query: 116 AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVI---NTPYHF 172
AAALRSK ++ T LT SQFRY +L++MHAGR+ +S +H+ D H +TPYHF
Sbjct: 2 AAALRSK-SSRETALLTFSQFRYFILNHMHAGRLPNS-YISHKPNCD-HCFTHSHTPYHF 58
Query: 173 TSFRPVSLRGELVEKGSQLCTDNAKCQKLTGGSS--------SITSSYGDPPEVWQPPGD 224
TSF+PVSLRGELV+KG + DN + K+ ++ +I +S+GDPPEVW GD
Sbjct: 59 TSFKPVSLRGELVDKGLEFF-DNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GD 115
Query: 225 GIAVRVNGQGPNLVRGGGSGSGFGSGS-------KDGCWGGSNLGNKFPTPKEICKGLDK 277
GI VR G G NLVRGGG G KD WGGSNLG+ FPTPKEIC+GLDK
Sbjct: 116 GIVVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDK 175
Query: 278 FVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMG 337
FVIGQERAKKVLSVAVYNHY RIY++S QK + D+D+VELEKSNILLMG
Sbjct: 176 FVIGQERAKKVLSVAVYNHYKRIYHQSLQK------CDDKAEATDNDSVELEKSNILLMG 229
Query: 338 PTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQG 397
PTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLL V+DYNVAAAQQG
Sbjct: 230 PTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQG 289
Query: 398 IVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID 457
IVYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID
Sbjct: 290 IVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQID 349
Query: 458 TKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSD 517
TKDILFICGGAF+D+EKTISERRQDSSIGFGAPVRANMR GG TDA V SSL+ETVESSD
Sbjct: 350 TKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSD 409
Query: 518 LIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGQAAFYGK 575
LI+YGLIPEFVGRFP+LVSL ALTENQLV+VLTEPKNALGKQY+KMFQMNG + K
Sbjct: 410 LISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTK 467
>gi|449456973|ref|XP_004146223.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 571
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 331/464 (71%), Positives = 367/464 (79%), Gaps = 29/464 (6%)
Query: 119 LRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVINTPYHFTSFRPV 178
LRS+ ++ +LT+S+ R+ + + +HA + S +D +N+PYH SF+PV
Sbjct: 7 LRSR-SSKEVATLTLSRCRHCISNSIHAAFTPNKS--------NDCFLNSPYHLVSFKPV 57
Query: 179 SLRGELVEKGSQLCTDNAKCQKLT-------GGSSSITSSYGDPPEVWQPPGDGIAVRVN 231
SLRG+ + G+Q Q T S+YGDPPEVW GDGI +R
Sbjct: 58 SLRGDFFDTGTQPLDHRRIYQSPTKTLNHRLSKKGCFMSTYGDPPEVWS--GDGIVIR-- 113
Query: 232 GQGPNLVRGGGSGSGFGSGSK--------DGCWGGSNLGNKFPTPKEICKGLDKFVIGQE 283
G +L GG G SGS DGCWGGS+LG FPTPKEI KGLDKFVIGQE
Sbjct: 114 GSNSSLNGRGGDGGSSNSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQE 173
Query: 284 RAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGK 343
RAKKVLSV VYNHY RIY+ES Q R G++ + D DDD VELEKSNILLMGPTGSGK
Sbjct: 174 RAKKVLSVGVYNHYKRIYHESLQ-RPTGDTFNNKADAADDDKVELEKSNILLMGPTGSGK 232
Query: 344 TLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDE 403
TLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLL V+DYNVAAAQQGIVYIDE
Sbjct: 233 TLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDE 292
Query: 404 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILF 463
VDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRG+NIQIDTKDILF
Sbjct: 293 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILF 352
Query: 464 ICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGL 523
ICGGAF+D+EKTISERRQDSS+GFGAPVRANMRAGGVTDA+VTSSL+ETVESSDLIAYGL
Sbjct: 353 ICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGL 412
Query: 524 IPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
IPEFVGRFP+LVSL ALTENQLVQVLTEPKNALGKQYRKMFQMN
Sbjct: 413 IPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN 456
>gi|307135876|gb|ADN33742.1| ATP-dependent clp protease ATP-binding subunit clpx [Cucumis melo
subsp. melo]
Length = 571
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 328/462 (70%), Positives = 368/462 (79%), Gaps = 25/462 (5%)
Query: 119 LRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVINTPYHFTSFRPV 178
LRS+ ++ +LT+S+ R+ + + +HA A S + K +D +N+PYH SF+PV
Sbjct: 7 LRSR-SSKEVATLTLSRCRHCISNSIHA---AFSPK-----KSNDCFLNSPYHLVSFKPV 57
Query: 179 SLRGELVEKGSQLCTDNAKCQKLTGG-------SSSITSSYGDPPEVWQPPGDGIAVR-- 229
SLRG+ + G+Q Q T S+YGDPPEVW GDGI +R
Sbjct: 58 SLRGDFFDSGTQPLDHRRIYQNSTKSLNHRLSKKGCFMSTYGDPPEVWS--GDGIVIRGS 115
Query: 230 ---VNGQGPNLVRGGGSGSGFGSGSK-DGCWGGSNLGNKFPTPKEICKGLDKFVIGQERA 285
+NG+G + G + DGCWGGS+LG FPTPKEI KGLDKFVIGQ+RA
Sbjct: 116 NSSLNGRGGDGGSSNPGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQDRA 175
Query: 286 KKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTL 345
KKVLSV VYNHY RIY+ES Q R G++ + D DDD VELEKSNILLMGPTGSGKTL
Sbjct: 176 KKVLSVGVYNHYKRIYHESLQ-RPTGDAFNNKADAADDDKVELEKSNILLMGPTGSGKTL 234
Query: 346 LAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVD 405
LAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLL V+DYNVAAAQQGIVYIDEVD
Sbjct: 235 LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVD 294
Query: 406 KITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFIC 465
KITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRG+NIQIDTKDILFIC
Sbjct: 295 KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFIC 354
Query: 466 GGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIP 525
GGAF+D+EKTISERRQDSS+GFGAPVRANMRAGGVTDA+VTSSL+ETVESSDLIAYGLIP
Sbjct: 355 GGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIP 414
Query: 526 EFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
EFVGRFP+LVSL ALTENQLVQVLTEPKNALGKQYRKMFQMN
Sbjct: 415 EFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN 456
>gi|356516065|ref|XP_003526717.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 524
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 322/455 (70%), Positives = 350/455 (76%), Gaps = 51/455 (11%)
Query: 118 ALRSKP--ATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVINTPYHFTSF 175
A RSKP + T SL ++ FR+L+ +Y AG SSRC R+ +
Sbjct: 3 AFRSKPCCSYKETASLALAHFRHLVFNYARAG----SSRCPPRAGFGVR----------- 47
Query: 176 RPVSLRGELVEKGSQLCTDNAKCQKLTGGSSSITSSYGDPPEVWQPPGDGIAVRVNGQGP 235
RG +V +S GDPPEVW G GI VR
Sbjct: 48 -----RGYIV-----------------------VASLGDPPEVWS--GGGIVVRPGNS-- 75
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
N GG G+ SK+GCWGGSNLGN FPTPKEICKGLDKFVIGQERAKKVLSVAVYN
Sbjct: 76 NFEVAGGGGAPNSGDSKEGCWGGSNLGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 135
Query: 296 HYMRIYNESS-QKRSAGES-SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARY 353
HY RI+NE+S K AG+S +S D DDD VELEKSNILLMGPTGSGKTLLAKTLAR+
Sbjct: 136 HYKRIFNETSLPKWPAGDSDNSVKVDAADDDRVELEKSNILLMGPTGSGKTLLAKTLARF 195
Query: 354 VNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAES 413
VNVPFVIADAT+LTQAGYVGEDVESILYKLL V+DYNVAAAQQGIVYIDEVDKITKKAES
Sbjct: 196 VNVPFVIADATSLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAES 255
Query: 414 LNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIE 473
LNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTK+ILFICGGAFVD+E
Sbjct: 256 LNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLE 315
Query: 474 KTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPV 533
KTISERR DSSIGFGAP+RANMR G VT+A V SSL+ETVESSDLIAYGLIPEFVGRFP+
Sbjct: 316 KTISERRHDSSIGFGAPIRANMRTGKVTEAAVASSLLETVESSDLIAYGLIPEFVGRFPI 375
Query: 534 LVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNG 568
LVSL ALTENQL+QVL+EPKNALGKQY+KMFQMNG
Sbjct: 376 LVSLSALTENQLIQVLSEPKNALGKQYKKMFQMNG 410
>gi|449515470|ref|XP_004164772.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
ATP-binding subunit ClpX-like [Cucumis sativus]
Length = 571
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 326/464 (70%), Positives = 362/464 (78%), Gaps = 29/464 (6%)
Query: 119 LRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVINTPYHFTSFRPV 178
LRS+ ++ +LT+S+ R+ + + +HA + S +D +N+PYH SF+PV
Sbjct: 7 LRSR-SSKEVATLTLSRCRHCISNSIHAAFTPNKS--------NDCFLNSPYHLVSFKPV 57
Query: 179 SLRGELVEKGSQLCTDNAKCQKLT-------GGSSSITSSYGDPPEVWQPPGDGIAVRVN 231
SLRG+ + G+Q Q T S+YGDPPEVW GDGI +R
Sbjct: 58 SLRGDFFDTGTQPLDHRRIYQSPTKTLNHRLSKKGCFMSTYGDPPEVWS--GDGIVIR-- 113
Query: 232 GQGPNLVRGGGSGSGFGSGSK--------DGCWGGSNLGNKFPTPKEICKGLDKFVIGQE 283
G +L GG G SGS DGCWGGS+LG FPTPKEI KGLDKFVIGQE
Sbjct: 114 GSNSSLNGRGGDGGSSNSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQE 173
Query: 284 RAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGK 343
RAKKVLSV VYNHY RIY+ES Q R G++ + D DDD VELEKSNILLMGPTGSGK
Sbjct: 174 RAKKVLSVGVYNHYKRIYHESLQ-RPTGDTFNNKADAADDDKVELEKSNILLMGPTGSGK 232
Query: 344 TLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDE 403
TLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLL V+DYNVAAAQQGIVYIDE
Sbjct: 233 TLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDE 292
Query: 404 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILF 463
VDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRG+NIQIDTKDILF
Sbjct: 293 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILF 352
Query: 464 ICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGL 523
ICG + + KTISERRQDSS+GFGAPVRANMRAGGVTDA+VTSSL+ETVESSDLIAYGL
Sbjct: 353 ICGVPSLXLGKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGL 412
Query: 524 IPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
IPEFVGRFP+LVSL ALTENQLVQVLTEPKNALGKQYRKMFQMN
Sbjct: 413 IPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN 456
>gi|147791350|emb|CAN75136.1| hypothetical protein VITISV_040753 [Vitis vinifera]
Length = 600
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/495 (66%), Positives = 371/495 (74%), Gaps = 41/495 (8%)
Query: 116 AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVI---NTPYHF 172
AAALRSK ++ T LT SQFRY +L++MHAGR+ +S +H+ D H +TPYHF
Sbjct: 2 AAALRSK-SSRETALLTFSQFRYFILNHMHAGRLPNS-YISHKPNCD-HCFTHSHTPYHF 58
Query: 173 TSFRPVSLRGELVEKGSQLCTDNAKCQKLTGGSS--------SITSSYGDPPEVWQPPGD 224
TSF+PVSLRGELV+KG + DN + K+ ++ +I +S+GDPPEVW GD
Sbjct: 59 TSFKPVSLRGELVDKGLEFF-DNQRFSKVGFSTNESKKLSXDTILNSFGDPPEVWS--GD 115
Query: 225 GIAVRVNGQGPNLVRGGGSGSGFGSGS-------KDGCWGGSNLGNKFPTPKEICKGLDK 277
GI VR G G NLVRGGG G KD WGGSNLG+ FPTPKEIC+GLDK
Sbjct: 116 GIVVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDK 175
Query: 278 FVIGQERAKKVLSVAVYNHYMRIYNESSQK-------RSAGESSSCTTDGVDDDTVELEK 330
FVIGQERAKKVLSVAVYNHY RIY+ZS QK R A ++S + D+D+VELEK
Sbjct: 176 FVIGQERAKKVLSVAVYNHYKRIYHZSLQKCDPTWRIRPAEDTSDDKAEATDNDSVELEK 235
Query: 331 SNILLMGPTGSGKT--------LLAKTLARYVNVPFVIADAT--TLTQAGYVGEDVESIL 380
SNILLMGPTGSG T L Y + D T L AGYVGEDVESIL
Sbjct: 236 SNILLMGPTGSGSTGSLSIIMLFLITWFTWYFHFFKDREDITCQNLGTAGYVGEDVESIL 295
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
YKLL V+DYNV AAQQGIVYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGTVVNV
Sbjct: 296 YKLLMVADYNVVAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNV 355
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
PEKGARKHPRGDNIQIDTKDILFICGGAF+D+EKTISERRQDSSIGFGAPVRANMR GG
Sbjct: 356 PEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGP 415
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
T A V SSL+ETVESSDLI+YGLIPEFVGRFP+LVSL ALTENQLV+VLTEPKNALGKQY
Sbjct: 416 TXAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQY 475
Query: 561 RKMFQMNGQAAFYGK 575
+KMFQMNG + K
Sbjct: 476 KKMFQMNGVKLHFTK 490
>gi|356509253|ref|XP_003523365.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 524
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 303/365 (83%), Positives = 324/365 (88%), Gaps = 7/365 (1%)
Query: 207 SITSSYGDPPEVWQPPGDGIAVRVNGQGPNLVRGGGSGSGFGSGSKDGCWGGSNLGNKFP 266
++ SS GDPPEVW G GI VR G V GGG+ G SK+GCWGGSNLGN FP
Sbjct: 50 NVVSSLGDPPEVWS--GGGIVVR-PGNSNFDVAGGGAAPNSGD-SKEGCWGGSNLGNSFP 105
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNE-SSQKRSAGES--SSCTTDGVDD 323
TPKEICKGLDKFVIGQERAKKVLSVAVYNHY RI+NE SS K AG+S ++ TD VDD
Sbjct: 106 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIFNETSSSKWPAGDSDNNNVKTDAVDD 165
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VELEKSNILLMGPTGSGKTLLAKTLAR+VNVPFVIADAT+LTQAGYVGEDVESILYKL
Sbjct: 166 DRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESILYKL 225
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK
Sbjct: 226 LMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 285
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
GARKHPRGDNIQIDTK+ILFICGGAFVD+EKTISE R DSSIGFGAP+RANMR G VT+A
Sbjct: 286 GARKHPRGDNIQIDTKNILFICGGAFVDLEKTISESRHDSSIGFGAPIRANMRTGKVTEA 345
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V SSL++TVESSDL+AYGLIPEFVGRFP+LVSL ALTENQL+QVLTEPKNALGKQY+KM
Sbjct: 346 AVASSLLQTVESSDLVAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYKKM 405
Query: 564 FQMNG 568
FQMNG
Sbjct: 406 FQMNG 410
>gi|224132768|ref|XP_002321405.1| predicted protein [Populus trichocarpa]
gi|222868401|gb|EEF05532.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/312 (85%), Positives = 289/312 (92%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGGSNLG+ FPTPKEICK LD FVIGQ RAKKVLSVAVYNHY RIY ES +K S +S +
Sbjct: 1 WGGSNLGSSFPTPKEICKALDNFVIGQRRAKKVLSVAVYNHYKRIYLESVKKWSNTDSGN 60
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
+D +DDD VELEKSNILLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQA YVGED
Sbjct: 61 EKSDIMDDDGVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQARYVGED 120
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VESILYKLLT +DYNVAAAQQGI+YIDE+DKITKKAES+NISRDVSGEGVQQALLKMLEG
Sbjct: 121 VESILYKLLTAADYNVAAAQQGIIYIDEIDKITKKAESVNISRDVSGEGVQQALLKMLEG 180
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
T+VNVPEKGARKHPRGDNIQIDTKDILFICGGAF+D+EKTISERRQDSSIGFGAPVRANM
Sbjct: 181 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANM 240
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
R GGVT VTSSL+ET ESSDL++YGLIPEFVGRFP+LVSL ALTE+QLVQVLTEPKNA
Sbjct: 241 RTGGVTSTAVTSSLLETAESSDLVSYGLIPEFVGRFPILVSLAALTEDQLVQVLTEPKNA 300
Query: 556 LGKQYRKMFQMN 567
LGKQY+K+FQMN
Sbjct: 301 LGKQYKKLFQMN 312
>gi|356561766|ref|XP_003549149.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 711
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 284/382 (74%), Positives = 319/382 (83%), Gaps = 20/382 (5%)
Query: 204 GSSSITSSYGDPPEVW-------QPPGDGIAVRVNGQGP-----NLVRGGG-----SGSG 246
G+ S G+PPE W G+G+AV P N++R G SG G
Sbjct: 215 GAGRGNGSNGEPPESWPLAPDGSNGNGNGLAVHTPPGPPFPPGINVIRATGPRNGGSGGG 274
Query: 247 FGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQ 306
G + WGGSNLG FP+PKEICKGLDKFVIGQ+RAKKVLSVAVYNHY RIY+ + Q
Sbjct: 275 GGGKGEKTAWGGSNLGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQ 334
Query: 307 KRSAGESS-SCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATT 365
K SA +S S D DDD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFV+ DATT
Sbjct: 335 KGSAADSGVSEVLD--DDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVVTDATT 392
Query: 366 LTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGV 425
LTQAGYVGEDVESILYKLLTVSD+NVAAAQQGI+YIDEVDKITKK++SLNISRDVSGEGV
Sbjct: 393 LTQAGYVGEDVESILYKLLTVSDFNVAAAQQGIIYIDEVDKITKKSKSLNISRDVSGEGV 452
Query: 426 QQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSI 485
QQALLKMLEGT+VNVPEKGARKHPRGDNIQ+DTK+ILFICGGAF+D+EKTISERRQDSSI
Sbjct: 453 QQALLKMLEGTIVNVPEKGARKHPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSI 512
Query: 486 GFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQL 545
GFGAPVRANMRAGG+TD+ VTSSL+E+VES+DLIAYGLIPEF+GRFP+LVSL ALTE+QL
Sbjct: 513 GFGAPVRANMRAGGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQL 572
Query: 546 VQVLTEPKNALGKQYRKMFQMN 567
+ VLTEPKNALGKQY+K+F MN
Sbjct: 573 MMVLTEPKNALGKQYKKLFSMN 594
>gi|356529352|ref|XP_003533258.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 713
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 314/375 (83%), Gaps = 23/375 (6%)
Query: 214 DPPEVWQ-PPGDG---------IAVRVN-----GQGPNLVRGGG-----SGSGFGSGSKD 253
+PPE W PP DG +AV G N++R G SG G +
Sbjct: 224 EPPESWPLPPDDGSNGNGNGNGLAVHTPPGPPFAPGINVIRATGPRNGGSGGAGGGKGEK 283
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
WGGSNLG FP+PKEICKGLDKFVIGQ+RAKKVLSVAVYNHY RIY+ + QK SA +S
Sbjct: 284 TAWGGSNLGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGSAADS 343
Query: 314 -SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYV 372
+S D DDD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYV
Sbjct: 344 GASEVLD--DDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 401
Query: 373 GEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 432
GEDVESILYKLL VSD+NVAAAQQGI+YIDEVDKITKKAESLNISRDVSGEGVQQALLKM
Sbjct: 402 GEDVESILYKLLVVSDFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 461
Query: 433 LEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR 492
LEGT+VNVPEKGARK+PRGDNIQ+DTK+ILFICGGAF+D+EKTISERRQDSSIGFGAPVR
Sbjct: 462 LEGTIVNVPEKGARKNPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVR 521
Query: 493 ANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEP 552
ANMRA G+TD+ VTSSL+E+VES+DLIAYGLIPEF+GRFP+LVSL ALTE+QL VLTEP
Sbjct: 522 ANMRAVGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLTMVLTEP 581
Query: 553 KNALGKQYRKMFQMN 567
KNALGKQY+K+F MN
Sbjct: 582 KNALGKQYKKLFSMN 596
>gi|356576571|ref|XP_003556404.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 513
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/356 (76%), Positives = 301/356 (84%), Gaps = 18/356 (5%)
Query: 213 GDPPEVWQPPGDGIAVRVNGQGPNLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEIC 272
G+PPE W P D A N +R SG +DG GGSNLG FPTPKEIC
Sbjct: 58 GEPPEDW--PHDHYAATQTPISVNFIRA--------SGPRDGWVGGSNLGRDFPTPKEIC 107
Query: 273 KGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD-DTVELEKS 331
KGLDKFVIGQ RAKKVLSVAVYNHY RIY S E+ + G+DD D VELEKS
Sbjct: 108 KGLDKFVIGQHRAKKVLSVAVYNHYQRIYQGS-------EADEGLSQGLDDGDDVELEKS 160
Query: 332 NILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNV 391
N+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLL +++NV
Sbjct: 161 NVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNV 220
Query: 392 AAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRG 451
AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPE+GARKHPRG
Sbjct: 221 QAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTMVNVPERGARKHPRG 280
Query: 452 DNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLME 511
DNIQIDTK+ILFICGGAF+D+EKTISERRQDSSIGFG+PVR+NMR GGVT+A VTSSL+E
Sbjct: 281 DNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGSPVRSNMRTGGVTNAAVTSSLLE 340
Query: 512 TVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+VES+DLIAYGLIPEF+GRFP+L+SL ALTE+QL+QVLTEPKNAL KQY+K+F MN
Sbjct: 341 SVESADLIAYGLIPEFIGRFPILISLSALTEDQLMQVLTEPKNALAKQYKKLFNMN 396
>gi|357149618|ref|XP_003575174.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Brachypodium distachyon]
Length = 640
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/316 (84%), Positives = 290/316 (91%), Gaps = 1/316 (0%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
KDG WGGSNLG FPTPKEI KGLDK+VIGQERAKKVLSVAVYNHY RIY++S QK S
Sbjct: 212 KDG-WGGSNLGKDFPTPKEISKGLDKYVIGQERAKKVLSVAVYNHYKRIYHQSVQKGSGA 270
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
+ S + DD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGY
Sbjct: 271 DLGSSDGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 330
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
VGEDVESILYKLLTV+D+NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK
Sbjct: 331 VGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 390
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV 491
MLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAF+D+EKTISERRQDSSIGFGAPV
Sbjct: 391 MLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 450
Query: 492 RANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTE 551
RA+MR GG++ A VTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVLTE
Sbjct: 451 RASMRTGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLTE 510
Query: 552 PKNALGKQYRKMFQMN 567
PKNALGKQ+RK+F MN
Sbjct: 511 PKNALGKQFRKLFSMN 526
>gi|215769357|dbj|BAH01586.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190998|gb|EEC73425.1| hypothetical protein OsI_07697 [Oryza sativa Indica Group]
Length = 645
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/316 (83%), Positives = 289/316 (91%), Gaps = 1/316 (0%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
KDG WGGSNLG PTPKEIC+GLDK+VIGQ+RAKKVLSVAVYNHY RIY++S QK S
Sbjct: 217 KDG-WGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSGA 275
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
+ + DDD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGY
Sbjct: 276 DLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 335
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
VGEDVESILYKLL V+D+NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK
Sbjct: 336 VGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 395
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV 491
MLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAF+D+EKTISERRQDSSIGFGAPV
Sbjct: 396 MLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 455
Query: 492 RANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTE 551
RANMRAGG++ A VTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVL E
Sbjct: 456 RANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLME 515
Query: 552 PKNALGKQYRKMFQMN 567
PKNALGKQ++K+F MN
Sbjct: 516 PKNALGKQFKKLFSMN 531
>gi|413937331|gb|AFW71882.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
Length = 642
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/312 (84%), Positives = 286/312 (91%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGGSNLG PTPKEICKGLDK+VIGQ+RAKKVLSVAVYNHY RIY++S QK S +
Sbjct: 217 WGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSGADLGG 276
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
+ DD+ VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGED
Sbjct: 277 FDGEADDDNNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 336
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VESILYKLLTV+D+NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 337 VESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 396
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
T+VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRANM
Sbjct: 397 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 456
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
R GG + A VTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVLTEPKNA
Sbjct: 457 RVGGTSSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLTALNEDQLVQVLTEPKNA 516
Query: 556 LGKQYRKMFQMN 567
LGKQ++K+F MN
Sbjct: 517 LGKQFKKLFSMN 528
>gi|413937330|gb|AFW71881.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
Length = 643
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/313 (84%), Positives = 287/313 (91%), Gaps = 1/313 (0%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK-RSAGESS 314
WGGSNLG PTPKEICKGLDK+VIGQ+RAKKVLSVAVYNHY RIY++S QK RS +
Sbjct: 217 WGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGRSGADLG 276
Query: 315 SCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGE 374
+ DD+ VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGE
Sbjct: 277 GFDGEADDDNNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGE 336
Query: 375 DVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 434
DVESILYKLLTV+D+NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE
Sbjct: 337 DVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 396
Query: 435 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRAN 494
GT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRAN
Sbjct: 397 GTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 456
Query: 495 MRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKN 554
MR GG + A VTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVLTEPKN
Sbjct: 457 MRVGGTSSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLTALNEDQLVQVLTEPKN 516
Query: 555 ALGKQYRKMFQMN 567
ALGKQ++K+F MN
Sbjct: 517 ALGKQFKKLFSMN 529
>gi|255557853|ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223541002|gb|EEF42560.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 698
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/309 (85%), Positives = 288/309 (93%), Gaps = 1/309 (0%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
SNLG PTPKEIC+GLDKFVIGQ+RAKKVLSVAVYNHY RIY+ +S K+ GE S +
Sbjct: 272 SNLGKDLPTPKEICRGLDKFVIGQDRAKKVLSVAVYNHYKRIYH-ASLKKGPGEESGSSD 330
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
DDD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADAT LTQAGYVGEDVES
Sbjct: 331 AVDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATALTQAGYVGEDVES 390
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
ILYKLL+V+++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+V
Sbjct: 391 ILYKLLSVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 450
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
NVPEKGARKHPRGDNIQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRANMRAG
Sbjct: 451 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 510
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
GVT+A VTSSL+E+VES+DLIAYGLIPEF+GRFP+LVSL ALTE+QLV+VLTEPKNALGK
Sbjct: 511 GVTNAAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLVRVLTEPKNALGK 570
Query: 559 QYRKMFQMN 567
QY+K+F MN
Sbjct: 571 QYKKLFSMN 579
>gi|242062022|ref|XP_002452300.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
gi|241932131|gb|EES05276.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
Length = 640
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/309 (84%), Positives = 285/309 (92%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
SNLG PTPKEICKGLDK+VIGQ+RAKKVLSVAVYNHY RIY++S QK S +
Sbjct: 222 SNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSGADLGGFDG 281
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
+ DDD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVES
Sbjct: 282 EADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES 341
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
ILYKLLTV+D+NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+V
Sbjct: 342 ILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 401
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
NVPEKGARKHPRGDNIQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRANMRAG
Sbjct: 402 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 461
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
G++ A VTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVLTEPKNALGK
Sbjct: 462 GISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLTEPKNALGK 521
Query: 559 QYRKMFQMN 567
Q++K+F MN
Sbjct: 522 QFKKLFSMN 530
>gi|359493519|ref|XP_002264217.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Vitis vinifera]
Length = 685
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/318 (85%), Positives = 297/318 (93%), Gaps = 4/318 (1%)
Query: 250 GSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRS 309
G ++G WGGSNLG PTPKEICKGLDKFVIGQERAKKVLSVAVYNHY RIY+ S QK S
Sbjct: 253 GERNG-WGGSNLGKDLPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHGSLQKGS 311
Query: 310 AGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQA 369
ES T VDDD+VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQA
Sbjct: 312 GAESG---TSEVDDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 368
Query: 370 GYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQAL 429
GYVGEDVESILYKLLTV+++NV AAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQAL
Sbjct: 369 GYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQAL 428
Query: 430 LKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGA 489
LKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVD+EKTIS+RRQDSSIGFGA
Sbjct: 429 LKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGA 488
Query: 490 PVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVL 549
PVRANMR GG+T+AVVTSSL+E+VESSDLIAYGLIPEF+GRFP+LVSL ALTE+QLV+VL
Sbjct: 489 PVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVKVL 548
Query: 550 TEPKNALGKQYRKMFQMN 567
TEPKNALGKQY+K+F MN
Sbjct: 549 TEPKNALGKQYKKLFSMN 566
>gi|222623077|gb|EEE57209.1| hypothetical protein OsJ_07170 [Oryza sativa Japonica Group]
Length = 583
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/330 (80%), Positives = 289/330 (87%), Gaps = 15/330 (4%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
KDG WGGSNLG PTPKEIC+GLDK+VIGQ+RAKKVLSVAVYNHY RIY++S QK S
Sbjct: 141 KDG-WGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSGA 199
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQA-- 369
+ + DDD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQA
Sbjct: 200 DLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIP 259
Query: 370 ------------GYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNIS 417
GYVGEDVESILYKLL V+D+NV AAQQG+VYIDEVDKITKKAESLNIS
Sbjct: 260 KVKLNSCAFLQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNIS 319
Query: 418 RDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTIS 477
RDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAF+D+EKTIS
Sbjct: 320 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTIS 379
Query: 478 ERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSL 537
ERRQDSSIGFGAPVRANMRAGG++ A VTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL
Sbjct: 380 ERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSL 439
Query: 538 LALTENQLVQVLTEPKNALGKQYRKMFQMN 567
AL E+QLVQVL EPKNALGKQ++K+F MN
Sbjct: 440 AALNEDQLVQVLMEPKNALGKQFKKLFSMN 469
>gi|357142782|ref|XP_003572692.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 548
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/355 (76%), Positives = 303/355 (85%)
Query: 213 GDPPEVWQPPGDGIAVRVNGQGPNLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEIC 272
G+PPE+W+ PG+ R G V +G G WGGSNLG +FPTPKEIC
Sbjct: 77 GEPPEIWRQPGEAPGARTGAVGRIDVVRVAAGDGKDGDDSGAGWGGSNLGRQFPTPKEIC 136
Query: 273 KGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSN 332
+GLDKFVIGQERAKKVLSVAVYNHY RI ES RSAG+SS T D D VELEKSN
Sbjct: 137 RGLDKFVIGQERAKKVLSVAVYNHYKRISCESFSSRSAGDSSESDTCTSDTDMVELEKSN 196
Query: 333 ILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVA 392
IL+MGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLL +D+++A
Sbjct: 197 ILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAADFDIA 256
Query: 393 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGD 452
AAQQGIVYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGTVV+VPEKGAR+HPRGD
Sbjct: 257 AAQQGIVYIDEVDKITKKAESMNLSRDVSGEGVQQALLKMLEGTVVSVPEKGARRHPRGD 316
Query: 453 NIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMET 512
NIQIDTK+ILFICGGAFVD+EKTISERR DSSIGF APVR+NMR G V +A +TS+L+ET
Sbjct: 317 NIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPVRSNMRTGSVINAEITSTLLET 376
Query: 513 VESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
VES DLIAYGLIPEFVGRFPVLVSL +L+E+QLV+VLT+PKNALG+QY K+F+MN
Sbjct: 377 VESGDLIAYGLIPEFVGRFPVLVSLSSLSEDQLVEVLTKPKNALGRQYTKLFEMN 431
>gi|357149621|ref|XP_003575175.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Brachypodium distachyon]
Length = 658
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/334 (79%), Positives = 290/334 (86%), Gaps = 19/334 (5%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
KDG WGGSNLG FPTPKEI KGLDK+VIGQERAKKVLSVAVYNHY RIY++S QK S
Sbjct: 212 KDG-WGGSNLGKDFPTPKEISKGLDKYVIGQERAKKVLSVAVYNHYKRIYHQSVQKGSGA 270
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQA-- 369
+ S + DD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQA
Sbjct: 271 DLGSSDGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIR 330
Query: 370 ---------GYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKK-------AES 413
GYVGEDVESILYKLLTV+D+NV AAQQG+VYIDEVDKITKK AES
Sbjct: 331 LKFSNFLQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKVSTFDMQAES 390
Query: 414 LNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIE 473
LNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAF+D+E
Sbjct: 391 LNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLE 450
Query: 474 KTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPV 533
KTISERRQDSSIGFGAPVRA+MR GG++ A VTSSL+E+VES DLIAYGLIPEF+GRFP+
Sbjct: 451 KTISERRQDSSIGFGAPVRASMRTGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPI 510
Query: 534 LVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
LVSL AL E+QLVQVLTEPKNALGKQ+RK+F MN
Sbjct: 511 LVSLAALNEDQLVQVLTEPKNALGKQFRKLFSMN 544
>gi|224120816|ref|XP_002318424.1| predicted protein [Populus trichocarpa]
gi|222859097|gb|EEE96644.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/335 (78%), Positives = 288/335 (85%), Gaps = 22/335 (6%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGGS LG+ FPTPK+ICK LDKFVIGQ+RAKKVLSVAVYNHY RI+ ES +K S S
Sbjct: 1 WGGSKLGSSFPTPKDICKALDKFVIGQQRAKKVLSVAVYNHYKRIHLESVKKWSVLFLSM 60
Query: 316 C----------------------TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARY 353
+ +D++ VELEKSNILLMGPTGSGKTLLAKTLAR+
Sbjct: 61 ALVNPFFPFPVTVMVCLYFPCNEKAETMDEEEVELEKSNILLMGPTGSGKTLLAKTLARF 120
Query: 354 VNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAES 413
VNVPFVIADATTLTQA YVGEDVES+LYKLLT +DYNVAAAQQGI+YIDEVDKITKKAES
Sbjct: 121 VNVPFVIADATTLTQARYVGEDVESMLYKLLTAADYNVAAAQQGIIYIDEVDKITKKAES 180
Query: 414 LNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIE 473
+NISRDVSGEGVQQALLKMLEGTVVNVP+K ARKHPRGDNIQI+TKDILFICGGAF+D+E
Sbjct: 181 VNISRDVSGEGVQQALLKMLEGTVVNVPDKEARKHPRGDNIQINTKDILFICGGAFIDLE 240
Query: 474 KTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPV 533
KTISERRQDSSIGFGAPVRANMR GGVT A +TSSL+ET ESSDL++YGLIPEFVGRFP+
Sbjct: 241 KTISERRQDSSIGFGAPVRANMRTGGVTSAAMTSSLLETAESSDLVSYGLIPEFVGRFPI 300
Query: 534 LVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNG 568
LVSL ALTE+QLVQVLTEPKNALGKQYRK+FQMNG
Sbjct: 301 LVSLSALTEDQLVQVLTEPKNALGKQYRKLFQMNG 335
>gi|359486202|ref|XP_002268594.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Vitis vinifera]
Length = 637
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/311 (82%), Positives = 282/311 (90%), Gaps = 2/311 (0%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
+NLG + PTPKEICKGLD+FVIGQE+AKKVLSVAVYNHY RI++ S QK S ES+
Sbjct: 209 ANLGRELPTPKEICKGLDEFVIGQEQAKKVLSVAVYNHYKRIHHASLQKESGAESTKAEI 268
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
D D+D+VELEKSN+LL+GPTGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGEDVES
Sbjct: 269 DNDDNDSVELEKSNVLLLGPTGSGKTLLAKTLARVVNVPFVIADATTLTQASYVGEDVES 328
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV- 437
IL+KLL V+++NV AAQQGIVYIDEVDKITKKAESLN RDVSGEGVQQALLKMLEGTV
Sbjct: 329 ILHKLLMVAEFNVEAAQQGIVYIDEVDKITKKAESLNTGRDVSGEGVQQALLKMLEGTVS 388
Query: 438 -VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
VNVP+KG RKHPRGDNIQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRANMR
Sbjct: 389 IVNVPDKGGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 448
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
GG+TDAVVTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVLTEPKNAL
Sbjct: 449 TGGLTDAVVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNAL 508
Query: 557 GKQYRKMFQMN 567
GKQY+KM MN
Sbjct: 509 GKQYKKMLSMN 519
>gi|449447519|ref|XP_004141515.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
gi|449510687|ref|XP_004163734.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 699
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 269/323 (83%), Positives = 292/323 (90%), Gaps = 3/323 (0%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
K WGGSNLG PTPKEICKGLDKFVIGQE+AKKVLSVAV+NHY RIY+ S QK S
Sbjct: 268 KKNEWGGSNLGKDLPTPKEICKGLDKFVIGQEKAKKVLSVAVHNHYKRIYHASLQKGSGN 327
Query: 312 ESSSCTTDGVDDD-TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
ES T D VDDD +VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFV+ADATTLTQAG
Sbjct: 328 ESG--TQDTVDDDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVLADATTLTQAG 385
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVESILYKLL +++NV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALL
Sbjct: 386 YVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEVDKITKKAESLNISRDVSGEGVQQALL 445
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
KMLEGT+VNVPEKG+RKHPRGDNIQIDTKDILFICGGAFVD+EKTIS+RRQDSSIGFGAP
Sbjct: 446 KMLEGTIVNVPEKGSRKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAP 505
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
VRANMR GG T A VTSSL+E+VESSDLIAYGLIPEF+GRFP+LVSLLALTE+QLVQVLT
Sbjct: 506 VRANMRIGGATSAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLT 565
Query: 551 EPKNALGKQYRKMFQMNGQAAFY 573
EPKNALGKQY+K+F MN Y
Sbjct: 566 EPKNALGKQYKKLFGMNKVKLHY 588
>gi|46390353|dbj|BAD15818.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
(CLPX) [Oryza sativa Japonica Group]
Length = 666
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/337 (78%), Positives = 289/337 (85%), Gaps = 22/337 (6%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
KDG WGGSNLG PTPKEIC+GLDK+VIGQ+RAKKVLSVAVYNHY RIY++S QK S
Sbjct: 217 KDG-WGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSGA 275
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQA-- 369
+ + DDD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQA
Sbjct: 276 DLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIP 335
Query: 370 ------------GYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKA------ 411
GYVGEDVESILYKLL V+D+NV AAQQG+VYIDEVDKITKKA
Sbjct: 336 KVKLNSCAFLQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKADVFNMQ 395
Query: 412 -ESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFV 470
ESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAF+
Sbjct: 396 AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFI 455
Query: 471 DIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGR 530
D+EKTISERRQDSSIGFGAPVRANMRAGG++ A VTSSL+E+VES DLIAYGLIPEF+GR
Sbjct: 456 DLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGR 515
Query: 531 FPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
FP+LVSL AL E+QLVQVL EPKNALGKQ++K+F MN
Sbjct: 516 FPILVSLAALNEDQLVQVLMEPKNALGKQFKKLFSMN 552
>gi|297739450|emb|CBI29632.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/304 (83%), Positives = 278/304 (91%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEICKGLD+FVIGQE+AKKVLSVAVYNHY RI++ S QK S ES+ D D+
Sbjct: 124 ELPTPKEICKGLDEFVIGQEQAKKVLSVAVYNHYKRIHHASLQKESGAESTKAEIDNDDN 183
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D+VELEKSN+LL+GPTGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGEDVESIL+KL
Sbjct: 184 DSVELEKSNVLLLGPTGSGKTLLAKTLARVVNVPFVIADATTLTQASYVGEDVESILHKL 243
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+++NV AAQQGIVYIDEVDKITKKAESLN RDVSGEGVQQALLKMLEGT+VNVP+K
Sbjct: 244 LMVAEFNVEAAQQGIVYIDEVDKITKKAESLNTGRDVSGEGVQQALLKMLEGTIVNVPDK 303
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHPRGDNIQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRANMR GG+TDA
Sbjct: 304 GGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRTGGLTDA 363
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
VVTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVLTEPKNALGKQY+KM
Sbjct: 364 VVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGKQYKKM 423
Query: 564 FQMN 567
MN
Sbjct: 424 LSMN 427
>gi|297734727|emb|CBI16961.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 290/422 (68%), Positives = 321/422 (76%), Gaps = 44/422 (10%)
Query: 168 TPYHFTSFRPVSLRGELVEKGSQLCTDNAKCQKLTGGSSSITSSYGDPPEV--WQPPGDG 225
T Y+F ++ L+G VE GS+ GG YG + W+
Sbjct: 43 TAYYFRPYKIAPLQGSFVEIGSK-----------NGGGHE--EDYGSRLRMSFWE----- 84
Query: 226 IAVRVNGQGPNLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERA 285
+R G P G+G WGGSNLG PTPKEICKGLDKFVIGQERA
Sbjct: 85 -TLRSYGGDPPENWPPPPPPPSGNGLARNGWGGSNLGKDLPTPKEICKGLDKFVIGQERA 143
Query: 286 KK--------------------VLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
KK VLSVAVYNHY RIY+ S QK S ES T VDDD+
Sbjct: 144 KKLDFIPFSDFLVRSNWCQTWEVLSVAVYNHYKRIYHGSLQKGSGAESG---TSEVDDDS 200
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLLT
Sbjct: 201 VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLT 260
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
V+++NV AAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT+VNVPEKGA
Sbjct: 261 VAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTIVNVPEKGA 320
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHPRGDNIQIDTKDILFICGGAFVD+EKTIS+RRQDSSIGFGAPVRANMR GG+T+AVV
Sbjct: 321 RKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRTGGLTNAVV 380
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
TSSL+E+VESSDLIAYGLIPEF+GRFP+LVSL ALTE+QLV+VLTEPKNALGKQY+K+F
Sbjct: 381 TSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVKVLTEPKNALGKQYKKLFS 440
Query: 566 MN 567
MN
Sbjct: 441 MN 442
>gi|326501208|dbj|BAJ98835.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/309 (82%), Positives = 282/309 (91%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
SNLG FPTPKEI KGLDK+VIGQ+RAKKVLSVAVYNHY RIY++S QK S +
Sbjct: 215 SNLGKDFPTPKEISKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSGADLGCSDG 274
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
+ +D VELEKSNILLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVES
Sbjct: 275 EADGEDNVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES 334
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
ILYKLL+V+D+NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+V
Sbjct: 335 ILYKLLSVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 394
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
NVPEKGARKHPRGDNIQIDTKDILFICGGAF+D+EKTISERRQDSSIGFGAPVRA+MR
Sbjct: 395 NVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRASMRTS 454
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
G++ A VTSSL+E+VES DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVLTEPKNALGK
Sbjct: 455 GISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGK 514
Query: 559 QYRKMFQMN 567
Q++K+F MN
Sbjct: 515 QFKKLFSMN 523
>gi|297851760|ref|XP_002893761.1| hypothetical protein ARALYDRAFT_473508 [Arabidopsis lyrata subsp.
lyrata]
gi|297339603|gb|EFH70020.1| hypothetical protein ARALYDRAFT_473508 [Arabidopsis lyrata subsp.
lyrata]
Length = 660
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/325 (78%), Positives = 284/325 (87%), Gaps = 7/325 (2%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGG++LG FPTPKEICK LDKFVIGQ RAKKVLSVAVYNHY RIY+ S +K SA +
Sbjct: 244 WGGASLGRDFPTPKEICKWLDKFVIGQTRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPID 303
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
DDD VEL+KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+D
Sbjct: 304 ------DDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDD 357
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VESIL+KLLTV+++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEG
Sbjct: 358 VESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEG 417
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
T+VNVP KGARKHPRGD+IQIDTKDILFICGGAFVD+EKTI +RRQDSSIGFGAPVRANM
Sbjct: 418 TIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANM 477
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
GVT +TSSL+E+VES+DL AYGLIPEFVGRFP+LVSL ALTE+QL++VL EPKNA
Sbjct: 478 ATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNA 537
Query: 556 LGKQYRKMFQMNG-QAAFYGKCFEI 579
LGKQY+K+F MN + F K EI
Sbjct: 538 LGKQYKKLFSMNNVKLHFTEKALEI 562
>gi|168043143|ref|XP_001774045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674591|gb|EDQ61097.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/318 (78%), Positives = 281/318 (88%), Gaps = 11/318 (3%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGGS LG PTP+EIC+ LDKFV+GQERAKK+LSVAVYNHY RIY+ES QK S
Sbjct: 1 WGGSFLGKDLPTPREICQALDKFVVGQERAKKILSVAVYNHYKRIYHESVQKGSE----- 55
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
+DD VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPF+IADATTLTQAGYVGED
Sbjct: 56 ------EDDVVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFIIADATTLTQAGYVGED 109
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VESILYKLL VS++NV AAQQGIVYIDEVDKITKKAES++ISRDVSGEGVQQALLKMLEG
Sbjct: 110 VESILYKLLMVSEFNVPAAQQGIVYIDEVDKITKKAESVSISRDVSGEGVQQALLKMLEG 169
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
T+VNVPEKGARKHPRGD+IQIDTKDILFICGGAF+++ KT++ER+QDSSIGFG+PVRA+M
Sbjct: 170 TIVNVPEKGARKHPRGDHIQIDTKDILFICGGAFIELAKTVAERKQDSSIGFGSPVRASM 229
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
R +TD+ +TSSL+E VESSDLI+YGLIPEF+GRFPVLVSL AL E+QLVQVLTEP+NA
Sbjct: 230 RGNKLTDSAITSSLLEMVESSDLISYGLIPEFIGRFPVLVSLSALNEDQLVQVLTEPRNA 289
Query: 556 LGKQYRKMFQMNGQAAFY 573
LGKQY+KMF MN Y
Sbjct: 290 LGKQYKKMFSMNNVKLHY 307
>gi|42562485|ref|NP_564423.3| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|51536496|gb|AAU05486.1| At1g33360 [Arabidopsis thaliana]
gi|53850505|gb|AAU95429.1| At1g33360 [Arabidopsis thaliana]
gi|332193466|gb|AEE31587.1| ATP-dependent Clp protease [Arabidopsis thaliana]
Length = 656
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/325 (78%), Positives = 283/325 (87%), Gaps = 7/325 (2%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGG+ LG FPTPKEICK LDKFVIGQ RAKKVLSVAVYNHY RIY+ S +K SA +
Sbjct: 240 WGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPID 299
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
DDD VEL+KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+D
Sbjct: 300 ------DDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDD 353
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VESIL+KLLTV+++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEG
Sbjct: 354 VESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEG 413
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
T+VNVP KGARKHPRGD+IQIDTKDILFICGGAFVD+EKTI +RRQDSSIGFGAPVRANM
Sbjct: 414 TIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANM 473
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
GVT +TSSL+E+VES+DL AYGLIPEFVGRFP+LVSL ALTE+QL++VL EPKNA
Sbjct: 474 ATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNA 533
Query: 556 LGKQYRKMFQMNG-QAAFYGKCFEI 579
LGKQY+K+F MN + F K EI
Sbjct: 534 LGKQYKKLFSMNNVKLHFTEKALEI 558
>gi|147770637|emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]
Length = 730
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/362 (75%), Positives = 297/362 (82%), Gaps = 48/362 (13%)
Query: 250 GSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKK---------------------- 287
G ++G WGGSNLG PTPKEICKGLDKFVIGQERAKK
Sbjct: 253 GERNG-WGGSNLGKDLPTPKEICKGLDKFVIGQERAKKFSGIEVYIVEIGKWGHSFKRSN 311
Query: 288 ------VLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGS 341
VLSVAVYNHY RIY+ S QK S ES T VDDD+VELEKSN+LLMGPTGS
Sbjct: 312 WCQTWEVLSVAVYNHYKRIYHGSLQKGSGAESG---TSEVDDDSVELEKSNVLLMGPTGS 368
Query: 342 GKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYI 401
GKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+++NV AAQQG+VYI
Sbjct: 369 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYI 428
Query: 402 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT----------------VVNVPEKGA 445
DEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT +VNVPEKGA
Sbjct: 429 DEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTDLKWSGYKILRGIKQXIVNVPEKGA 488
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHPRGDNIQIDTKDILFICGGAFVD+EKTIS+RRQDSSIGFGAPVRANMR GG+T+AVV
Sbjct: 489 RKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRTGGLTNAVV 548
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
TSSL+E+VESSDLIAYGLIPEF+GRFP+LVSL ALTE+QLV+VLTEPKNALGKQY+K+F
Sbjct: 549 TSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVKVLTEPKNALGKQYKKLFS 608
Query: 566 MN 567
MN
Sbjct: 609 MN 610
>gi|222622641|gb|EEE56773.1| hypothetical protein OsJ_06335 [Oryza sativa Japonica Group]
Length = 479
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 283/309 (91%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
SNLG +FPTPKEIC+GLDKFVIGQERAKKVLSVAVYNHY RI+ E RSAG+ S +
Sbjct: 53 SNLGRRFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIHCELLSSRSAGDCSETDS 112
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
D D VELEKSNIL+MGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVES
Sbjct: 113 CASDTDGVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES 172
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
ILYKLL +D++VAAAQQGIVYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGTVV
Sbjct: 173 ILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVV 232
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VPEKGAR+HPRGDNIQIDTK+ILFICGGAFVD+EKTISERR DSSIGF AP+R+NMR G
Sbjct: 233 SVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPIRSNMRTG 292
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
GV +A +TSSL+E+VES DLIAYGLIPEFVGRFP+LVSL +L+E+QLV+VLT+PKNALG+
Sbjct: 293 GVINAEITSSLLESVESGDLIAYGLIPEFVGRFPILVSLSSLSEDQLVEVLTKPKNALGR 352
Query: 559 QYRKMFQMN 567
QY K+F+MN
Sbjct: 353 QYTKLFEMN 361
>gi|413936321|gb|AFW70872.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
Length = 559
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/369 (73%), Positives = 312/369 (84%), Gaps = 15/369 (4%)
Query: 210 SSYGDPPEVWQPPGDGIAVRVNGQGP----NLVR----GGGSGSGFGSGSKDGCWGGSNL 261
S +PPE+W+ PG+ V G G ++VR GG G G + G WGGSNL
Sbjct: 76 SDGAEPPEIWRQPGEA-PVAPEGVGAVGRIDVVRVAAPGGEDFDGKDGGGESGGWGGSNL 134
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG---ESSSCTT 318
G +FPTPKEIC+GLDKFVIGQ+RAKKVLSVAVYNHY RIY ES RSA +S SCT+
Sbjct: 135 GRRFPTPKEICRGLDKFVIGQQRAKKVLSVAVYNHYKRIYCESLINRSAADCSQSDSCTS 194
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
D D VELEKSNIL+MGPTGSGKTLLAKTLAR+VNVPFVIADAT+LTQAGYVGEDVES
Sbjct: 195 D---TDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVES 251
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
ILYKLL +D++VAAAQQGIVYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGTVV
Sbjct: 252 ILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVV 311
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VPEKGAR+HPRGDNIQIDTK+ILFICGGAFVD+EKTISERR DSSIGF A VR+NMR+G
Sbjct: 312 SVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSG 371
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
GV +A +TSSL+++VES DLIAYGLIPEFVGRFP+LV L +L+E+QLV+VLTEPKNALG+
Sbjct: 372 GVINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGR 431
Query: 559 QYRKMFQMN 567
QY K+F+MN
Sbjct: 432 QYTKLFEMN 440
>gi|226491966|ref|NP_001147507.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
gi|195611856|gb|ACG27758.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
Length = 559
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/369 (73%), Positives = 312/369 (84%), Gaps = 15/369 (4%)
Query: 210 SSYGDPPEVWQPPGDGIAVRVNGQGP----NLVR----GGGSGSGFGSGSKDGCWGGSNL 261
S +PPE+W+ PG+ V G G ++VR GG G G + G WGGSNL
Sbjct: 76 SDGAEPPEIWRQPGEA-PVAPEGVGAVGRIDVVRVAAPGGEDFDGKDGGGESGGWGGSNL 134
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG---ESSSCTT 318
G +FPTPKEIC+GLDKFVIGQ+RAKKVLSVAVYNHY RIY ES RSA +S SCT+
Sbjct: 135 GRRFPTPKEICRGLDKFVIGQQRAKKVLSVAVYNHYKRIYCESLINRSAADCSQSDSCTS 194
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
D D VELEKSNIL+MGPTGSGKTLLAKTLAR+VNVPFVIADAT+LTQAGYVGEDVES
Sbjct: 195 D---TDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVES 251
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
ILYKLL +D++VAAAQQGIVYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGTVV
Sbjct: 252 ILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVV 311
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VPEKGAR+HPRGDNIQIDTK+ILFICGGAFVD+EKTISERR DSSIGF A VR+NMR+G
Sbjct: 312 SVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSG 371
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
GV +A +TSSL+++VES DLIAYGLIPEFVGRFP+LV L +L+E+QLV+VLTEPKNALG+
Sbjct: 372 GVINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGR 431
Query: 559 QYRKMFQMN 567
QY K+F+MN
Sbjct: 432 QYTKLFEMN 440
>gi|168031008|ref|XP_001768014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680856|gb|EDQ67289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/323 (76%), Positives = 283/323 (87%), Gaps = 5/323 (1%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKK--VLSVAVYNHYMRIYNESSQKRSA--- 310
WGGS+LG PTP+EIC+ LDKFV+GQE+AKK +LSVAVYNHY RIY ES +K +A
Sbjct: 1 WGGSSLGKVLPTPREICQALDKFVVGQEQAKKARILSVAVYNHYKRIYFESMRKGNAKPT 60
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
E + +++ VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADAT+LTQAG
Sbjct: 61 NEGFGVSEVECEENDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAG 120
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVESILYKLL +++NV AAQQGI+YIDEVDKITKKAES NISRDVSGEGVQQALL
Sbjct: 121 YVGEDVESILYKLLVEAEFNVLAAQQGIIYIDEVDKITKKAESKNISRDVSGEGVQQALL 180
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
KMLEGTVVNVPEKGARKHPRG++IQIDTKDILFICGGAFV++EK+I+ER+QDSSIGFGAP
Sbjct: 181 KMLEGTVVNVPEKGARKHPRGEHIQIDTKDILFICGGAFVELEKSIAERKQDSSIGFGAP 240
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
VRANMR + DA +TSSL+ETVESSDLI+YGLIPEF+GRFPV+VSL AL E+QLVQVLT
Sbjct: 241 VRANMRGNKLIDAAITSSLLETVESSDLISYGLIPEFIGRFPVIVSLSALDEDQLVQVLT 300
Query: 551 EPKNALGKQYRKMFQMNGQAAFY 573
EP+NALGKQY+KMF MN Y
Sbjct: 301 EPRNALGKQYKKMFAMNNVKLHY 323
>gi|47847699|dbj|BAD21479.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
(CLPX) [Oryza sativa Japonica Group]
Length = 554
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/307 (81%), Positives = 281/307 (91%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
LG +FPTPKEIC+GLDKFVIGQERAKKVLSVAVYNHY RI+ E RSAG+ S +
Sbjct: 143 LGRRFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIHCELLSSRSAGDCSETDSCA 202
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VELEKSNIL+MGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESIL
Sbjct: 203 SDTDGVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL 262
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
YKLL +D++VAAAQQGIVYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGTVV+V
Sbjct: 263 YKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVSV 322
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
PEKGAR+HPRGDNIQIDTK+ILFICGGAFVD+EKTISERR DSSIGF AP+R+NMR GGV
Sbjct: 323 PEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPIRSNMRTGGV 382
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
+A +TSSL+E+VES DLIAYGLIPEFVGRFP+LVSL +L+E+QLV+VLT+PKNALG+QY
Sbjct: 383 INAEITSSLLESVESGDLIAYGLIPEFVGRFPILVSLSSLSEDQLVEVLTKPKNALGRQY 442
Query: 561 RKMFQMN 567
K+F+MN
Sbjct: 443 TKLFEMN 449
>gi|168042097|ref|XP_001773526.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675228|gb|EDQ61726.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 433
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/339 (73%), Positives = 285/339 (84%), Gaps = 17/339 (5%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKK------------VLSVAVYNHYM 298
S+D WGG+ LG + PTP+EI + LDKFV+GQE+AKK +LSVAVYNHY
Sbjct: 10 SRD-SWGGAALGKELPTPREISQALDKFVVGQEKAKKAFSLFPSFNSLAILSVAVYNHYK 68
Query: 299 RIYNES---SQKRSAGESSSCT-TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYV 354
RI+ ES S R E + + + ++D VELEKSN+LLMGPTGSGKTLLAKTLAR+V
Sbjct: 69 RIHYESLLKSNIRLTDEGAGHSDMEDEENDGVELEKSNVLLMGPTGSGKTLLAKTLARFV 128
Query: 355 NVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESL 414
NVPFVIADATTLTQAGYVGEDVESILYKLL +++NV AAQQGIVYIDEVDKITKKAE++
Sbjct: 129 NVPFVIADATTLTQAGYVGEDVESILYKLLMAAEFNVPAAQQGIVYIDEVDKITKKAENM 188
Query: 415 NISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEK 474
NISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+++EK
Sbjct: 189 NISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDHIQVDTKDILFICGGAFIELEK 248
Query: 475 TISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVL 534
TI+ERRQDSSIGFGAPVRANMR + +A VTSSL+E VESSDLI+YGLIPEF+GRFPVL
Sbjct: 249 TIAERRQDSSIGFGAPVRANMRVNKLVNAAVTSSLLELVESSDLISYGLIPEFIGRFPVL 308
Query: 535 VSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGQAAFY 573
VSL AL E+QLVQVLTEP+NALGKQY+KMF MN Y
Sbjct: 309 VSLAALNEDQLVQVLTEPRNALGKQYKKMFAMNNVKLHY 347
>gi|255573808|ref|XP_002527823.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223532747|gb|EEF34526.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 603
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/309 (79%), Positives = 272/309 (88%), Gaps = 2/309 (0%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L N+ PTPKEICKGLD+FVIGQ+RAKKVL+VAVYNHY RIY+ S +K S + +
Sbjct: 177 LENELPTPKEICKGLDEFVIGQDRAKKVLAVAVYNHYKRIYHGSKRKESGADMGYTDSQN 236
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D++ VEL+KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESIL
Sbjct: 237 DDNEIVELDKSNVLLMGPTGSGKTLLAKTLARVVNVPFVIADATTLTQAGYVGEDVESIL 296
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN- 439
YKLL S++NV AAQ+GI+YIDEVDKITKKAES NI RDVSGEGVQQALLKMLEGT+VN
Sbjct: 297 YKLLAASEFNVEAAQRGIIYIDEVDKITKKAESSNIGRDVSGEGVQQALLKMLEGTIVNV 356
Query: 440 -VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
VP+KG RKHPRGD IQIDTKDILFICGGAFVD+EKTISERRQD+SIGFGAPVR NMR G
Sbjct: 357 PVPDKGPRKHPRGDPIQIDTKDILFICGGAFVDLEKTISERRQDASIGFGAPVRTNMRTG 416
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+ DAVV SSL+E+VES DL+AYGLIPEFVGRFP+LVSL AL E+QLVQVL EPKNALGK
Sbjct: 417 RMIDAVVASSLLESVESGDLVAYGLIPEFVGRFPILVSLSALNEDQLVQVLVEPKNALGK 476
Query: 559 QYRKMFQMN 567
QY+KMF MN
Sbjct: 477 QYKKMFSMN 485
>gi|12322572|gb|AAG51286.1|AC027035_9 CLP protease regulatory subunit CLPX, putative [Arabidopsis
thaliana]
Length = 650
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/330 (75%), Positives = 275/330 (83%), Gaps = 11/330 (3%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGG+ LG FPTPKEICK LDKFVIGQ RAKKVLSVAVYNHY RIY+ S +K
Sbjct: 240 WGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGLVLSLIH 299
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLL-----AKTLARYVNVPFVIADATTLTQAG 370
DDD VEL+KSN+LLMGPTGS AKTLAR VNVPFVIADATTLTQAG
Sbjct: 300 SAQPIDDDDNVELDKSNVLLMGPTGS-----GKTLLAKTLARLVNVPFVIADATTLTQAG 354
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVG+DVESIL+KLLTV+++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL
Sbjct: 355 YVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 414
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K+LEGT+VNVP KGARKHPRGD+IQIDTKDILFICGGAFVD+EKTI +RRQDSSIGFGAP
Sbjct: 415 KLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAP 474
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
VRANM GVT +TSSL+E+VES+DL AYGLIPEFVGRFP+LVSL ALTE+QL++VL
Sbjct: 475 VRANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLV 534
Query: 551 EPKNALGKQYRKMFQMNG-QAAFYGKCFEI 579
EPKNALGKQY+K+F MN + F K EI
Sbjct: 535 EPKNALGKQYKKLFSMNNVKLHFTEKALEI 564
>gi|357498613|ref|XP_003619595.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
gi|355494610|gb|AES75813.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
Length = 672
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/368 (74%), Positives = 305/368 (82%), Gaps = 16/368 (4%)
Query: 214 DPPEVWQPP-----GDGIAVRVN-----GQGPNLVRG---GGSGSGFGSGSKDGCWGGSN 260
+PPE W P G+G+AV G N++R G G G + WGGSN
Sbjct: 182 EPPETWPLPVGGGNGNGLAVHTPPGPPFAPGLNVIRARGPQEGGPGGGGNGEKNTWGGSN 241
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESS-SCTTD 319
LG P+PKEICKGLDKFVIGQ RAKKVLSVAVYNHY RIY+ + K S +S S D
Sbjct: 242 LGKDLPSPKEICKGLDKFVIGQGRAKKVLSVAVYNHYKRIYHATLPKGSGADSGISGILD 301
Query: 320 GVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
DD+ VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESI
Sbjct: 302 --DDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESI 359
Query: 380 LYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
LYKLL +DYNVAAAQQGI+YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VN
Sbjct: 360 LYKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 419
Query: 440 VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGG 499
VPEKGARK+PRGDNIQIDTK+ILFICGGAF+D+EKTISERRQDSSIGFGAPVRAN+R+G
Sbjct: 420 VPEKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANIRSGR 479
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
+ D+ V SSL+E+VESSDLIAYGLIPEF+GRFP+LVSL ALTE QL+QVLTEPK+ALGKQ
Sbjct: 480 IIDSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKHALGKQ 539
Query: 560 YRKMFQMN 567
Y+K+ MN
Sbjct: 540 YKKLVGMN 547
>gi|357126242|ref|XP_003564797.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 617
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/312 (75%), Positives = 271/312 (86%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGG++LG + PTP+E+C+ LD+FVIGQ +AKKVLSVAVYNHY RIYN + QK SA S
Sbjct: 191 WGGASLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNANVQKGSAANSGC 250
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
D +TVE++KSN+LLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGYVGED
Sbjct: 251 PEAANDDQNTVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGED 310
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VESIL KLL ++YNV AAQQGIVYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 311 VESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEG 370
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
TVV +PEKG+RK+ R D+IQIDTKDILFICGGAFVD++KTISERRQDSSIGFGAP+R M
Sbjct: 371 TVVTIPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLDKTISERRQDSSIGFGAPIRTKM 430
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
R+ GVT+ VTSSL+E+VES DL YGLIPEF+GR P+LVSL AL E+QLVQVLTEPKN+
Sbjct: 431 RSSGVTNPTVTSSLLESVESGDLAKYGLIPEFIGRLPILVSLAALHEDQLVQVLTEPKNS 490
Query: 556 LGKQYRKMFQMN 567
L +QYRKMF +N
Sbjct: 491 LSRQYRKMFSLN 502
>gi|115441503|ref|NP_001045031.1| Os01g0886600 [Oryza sativa Japonica Group]
gi|56784314|dbj|BAD82240.1| putative CLP protease regulatory subunit CLPX [Oryza sativa
Japonica Group]
gi|56785236|dbj|BAD82124.1| putative CLP protease regulatory subunit CLPX [Oryza sativa
Japonica Group]
gi|113534562|dbj|BAF06945.1| Os01g0886600 [Oryza sativa Japonica Group]
Length = 496
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/316 (73%), Positives = 271/316 (85%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
K WGG+ LG + PTP+E+C+ LD+FVIGQ +AKKVLSVAVYNHY RIYN + QK +
Sbjct: 64 KREWWGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNATVQKGCST 123
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
S D + +E++KSN+LLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGY
Sbjct: 124 NSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGY 183
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
VGEDVESIL KLL ++YNV AAQQGIVYIDEVDKITKKAES N+SRDVSGEGVQQALLK
Sbjct: 184 VGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLK 243
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV 491
+LEGTVV++PEKG+RK+ R ++IQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAP+
Sbjct: 244 ILEGTVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPI 303
Query: 492 RANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTE 551
R NMR+ VTD +VTSSL+E+VES DL YGLIPEF+GR P+LVSL AL E+QLVQVLTE
Sbjct: 304 RINMRSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLVQVLTE 363
Query: 552 PKNALGKQYRKMFQMN 567
PKN+L +QYRKMF +N
Sbjct: 364 PKNSLSRQYRKMFSLN 379
>gi|326489807|dbj|BAJ93977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 619
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/313 (75%), Positives = 273/313 (87%), Gaps = 2/313 (0%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGG+ LG + PTP+E+C+ LD+FVIGQ +AKKVLSVAVYNHY R+YN + QK SA ++S
Sbjct: 191 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRVYNATVQKGSA-DNSG 249
Query: 316 CTTDGVDD-DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGE 374
C DD D VE++KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGE
Sbjct: 250 CPDAANDDHDNVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATSLTQAGYVGE 309
Query: 375 DVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 434
DVESIL KLL ++YNV AAQQGIVYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LE
Sbjct: 310 DVESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILE 369
Query: 435 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRAN 494
GTVV +PEKG+RK+ R D+IQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAP+R N
Sbjct: 370 GTVVTIPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRTN 429
Query: 495 MRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKN 554
+R+ GVT VTSSL+E+VES DL +GLIPEF+GR P+LVSL AL E+QLVQVLTEPKN
Sbjct: 430 IRSSGVTSPTVTSSLLESVESGDLAKFGLIPEFIGRLPILVSLAALNEDQLVQVLTEPKN 489
Query: 555 ALGKQYRKMFQMN 567
+L +QYRKMF +N
Sbjct: 490 SLSRQYRKMFSLN 502
>gi|242059473|ref|XP_002458882.1| hypothetical protein SORBIDRAFT_03g042120 [Sorghum bicolor]
gi|241930857|gb|EES04002.1| hypothetical protein SORBIDRAFT_03g042120 [Sorghum bicolor]
Length = 623
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/312 (75%), Positives = 271/312 (86%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGG++LG++ PTP+E+C+ LD+FVIGQ +AKKVLSVAVYNHY RIYN + QK SA S
Sbjct: 195 WGGASLGDELPTPREMCRRLDEFVIGQAKAKKVLSVAVYNHYKRIYNANVQKESAANSGL 254
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
D + VE++KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGED
Sbjct: 255 PDAGHDDQNIVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATSLTQAGYVGED 314
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VESIL KLL ++YNV AAQQGIVYIDE+DKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 315 VESILQKLLVAAEYNVQAAQQGIVYIDEIDKITKKAESANVSRDVSGEGVQQALLKILEG 374
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
TVV++PEKG+RK+ R D+IQIDT DILFICGGAFVD+EKTISERRQDSSIGFGAPVR NM
Sbjct: 375 TVVSIPEKGSRKNSRNDSIQIDTTDILFICGGAFVDLEKTISERRQDSSIGFGAPVRTNM 434
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
R+ G + +VTS+L+E+VES DL+ YGLIPEF+GR P+LVSL AL E QLVQVLTEPKN+
Sbjct: 435 RSSGASCPMVTSTLLESVESGDLVRYGLIPEFIGRLPILVSLAALNEGQLVQVLTEPKNS 494
Query: 556 LGKQYRKMFQMN 567
L KQYRKMF +N
Sbjct: 495 LSKQYRKMFNLN 506
>gi|413951702|gb|AFW84351.1| hypothetical protein ZEAMMB73_159465 [Zea mays]
Length = 624
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/312 (75%), Positives = 270/312 (86%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGG++LG+ PTP+E+C+ LD+FVIGQ +AKKVLSVAVYNHY RIYN + QK AG S
Sbjct: 196 WGGASLGDDLPTPRELCRRLDEFVIGQAKAKKVLSVAVYNHYKRIYNANVQKEFAGNSGF 255
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
D + VE++KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGED
Sbjct: 256 PDAGHDDQNIVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATSLTQAGYVGED 315
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VESIL KLL ++YNV AAQQGIVYIDE+DKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 316 VESILQKLLVAAEYNVQAAQQGIVYIDEIDKITKKAESANVSRDVSGEGVQQALLKILEG 375
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
TVV++PEKG+RK+ R D+IQIDT DILFICGGAFVD+EKTISERRQDSSIGFGAP+R NM
Sbjct: 376 TVVSIPEKGSRKNSRNDSIQIDTTDILFICGGAFVDLEKTISERRQDSSIGFGAPIRTNM 435
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
R+ G + +VTSSL+E+VES DL+ YGLIPEF+GR P+LVSL AL E QLVQVLTEPKN+
Sbjct: 436 RSSGASCPMVTSSLLESVESGDLVRYGLIPEFIGRLPILVSLAALNEGQLVQVLTEPKNS 495
Query: 556 LGKQYRKMFQMN 567
L KQYRKMF +N
Sbjct: 496 LSKQYRKMFNLN 507
>gi|218189491|gb|EEC71918.1| hypothetical protein OsI_04712 [Oryza sativa Indica Group]
Length = 630
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/321 (72%), Positives = 271/321 (84%), Gaps = 9/321 (2%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKK---------VLSVAVYNHYMRIYNESSQ 306
WGG+ LG + PTP+E+C+ LD+FVIGQ +AKK VLSVAVYNHY RIYN + Q
Sbjct: 193 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLEGACHNWVLSVAVYNHYKRIYNATVQ 252
Query: 307 KRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTL 366
K + S D + +E++KSN+LLMGPTGSGKTLLAKTLAR VNVPF+IADAT+L
Sbjct: 253 KGCSTNSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSL 312
Query: 367 TQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ 426
TQAGYVGEDVESIL KLL ++YNV AAQQGIVYIDEVDKITKKAES+N+SRDVSGEGVQ
Sbjct: 313 TQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESVNVSRDVSGEGVQ 372
Query: 427 QALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIG 486
QALLK+LEGTVV++PEKG+RK+ R ++IQIDTKDILFICGGAFVD+EKTISERRQDSSIG
Sbjct: 373 QALLKILEGTVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIG 432
Query: 487 FGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLV 546
FGAP+R NMR+ VTD +VTSSL+E+VES DL YGLIPEF+GR P+LVSL AL E+QLV
Sbjct: 433 FGAPIRTNMRSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLV 492
Query: 547 QVLTEPKNALGKQYRKMFQMN 567
QVLTEPKN+L +QYRKMF +N
Sbjct: 493 QVLTEPKNSLSRQYRKMFSLN 513
>gi|224129802|ref|XP_002328806.1| predicted protein [Populus trichocarpa]
gi|222839104|gb|EEE77455.1| predicted protein [Populus trichocarpa]
Length = 521
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/323 (74%), Positives = 274/323 (84%), Gaps = 16/323 (4%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L + PTPKEICKGLD+FVIGQ++AKKVLSVAVYNHY RIY+ S QK+S S +
Sbjct: 108 LERELPTPKEICKGLDEFVIGQDKAKKVLSVAVYNHYKRIYHASKQKKSHAPWSHSDGEN 167
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQA-------GYVG 373
+++ +EL+KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA GYVG
Sbjct: 168 DENEFIELDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATTLTQASLFCCTAGYVG 227
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKK-------AESLNISRDVSGEGVQ 426
EDVESILYKLL V+++NV AAQ+GIVYIDEVDKIT K A S +I RDVSGEGVQ
Sbjct: 228 EDVESILYKLLVVAEFNVEAAQRGIVYIDEVDKITMKVYDFCVQAGSSSIGRDVSGEGVQ 287
Query: 427 QALLKMLEGTVVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS 484
QALLKMLEGTV+NVP +KG KHPRGD IQ+DTKDILFICGGAFV++EKTISERRQD+S
Sbjct: 288 QALLKMLEGTVINVPVPDKGPGKHPRGDTIQVDTKDILFICGGAFVNLEKTISERRQDAS 347
Query: 485 IGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQ 544
IGFGAPVRANMRAG +T+A+VTSSL+E+VES DL+AYGLIPEFVGRFPVL SLLAL E+Q
Sbjct: 348 IGFGAPVRANMRAGAITNAMVTSSLLESVESGDLVAYGLIPEFVGRFPVLASLLALNEDQ 407
Query: 545 LVQVLTEPKNALGKQYRKMFQMN 567
LVQVL EPKNALGKQY+K+F MN
Sbjct: 408 LVQVLMEPKNALGKQYKKIFNMN 430
>gi|449450117|ref|XP_004142810.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 619
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/405 (62%), Positives = 299/405 (73%), Gaps = 19/405 (4%)
Query: 168 TPYHFTSFRPVSLRGELVE----KGSQLCTDNAKCQKLTGGSSSITSSYGDPPEVWQPPG 223
T ++F + V L G +E KG++ +A + I ++ D + PP
Sbjct: 113 TAFYFRPLKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCAD--DFALPP- 169
Query: 224 DGIAVRVNGQGPNLVRGGGSGSGFGSGSKDGCWGG-SNLGNKFPTPKEICKGLDKFVIGQ 282
R NG GGS GS DG ++LG + TPKEI LDKFV+GQ
Sbjct: 170 -----RRNGSC------GGSDDNLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQ 218
Query: 283 ERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSG 342
E+AKKVLSVAVYNHY RIY+ S QK S + D++TVELEKSN+LLMGPTGSG
Sbjct: 219 EKAKKVLSVAVYNHYKRIYHSSLQKTSGQGPLGIELENDDNETVELEKSNLLLMGPTGSG 278
Query: 343 KTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYID 402
KTLLAKTLAR VNVPF IADAT LTQAGYVGEDVESILYKLL +++NV AAQ+GIVYID
Sbjct: 279 KTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLDAEFNVEAAQRGIVYID 338
Query: 403 EVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDIL 462
EVDKITKK+ESLN RDVSGEGVQQALLKMLEGTVV+VP+ GARKHPRGD IQ+DTK+IL
Sbjct: 339 EVDKITKKSESLNSGRDVSGEGVQQALLKMLEGTVVDVPDTGARKHPRGDTIQMDTKNIL 398
Query: 463 FICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYG 522
FICGGAFV +EK IS+R+ DSSIGFGAPVRA+MR G +T+ +VTSS++E VES DLI YG
Sbjct: 399 FICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDLVTSSMLENVESGDLITYG 458
Query: 523 LIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
LIPEFVGR P+LVSL AL E+QLVQVLT+PKNALGKQY+KM +MN
Sbjct: 459 LIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMN 503
>gi|12322385|gb|AAG51217.1|AC051630_14 CLP protease regulatory subunit CLPX, putative; 15869-19379
[Arabidopsis thaliana]
Length = 670
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/357 (68%), Positives = 273/357 (76%), Gaps = 45/357 (12%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WGG+ LG FPTPKEICK LDKFVIGQ RAKKVLSVAVYNHY RIY+ S +K
Sbjct: 240 WGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKK-------- 291
Query: 316 CTTDGVDDDTVELEKSNILL-------MGP-------------------------TGSGK 343
G+ D+ L N L + P TGSGK
Sbjct: 292 ----GLLHDSDALSPFNPLWFTLILWTLNPRSAAQPIDDDDNVELDKSNVLLMGPTGSGK 347
Query: 344 TLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDE 403
TLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KLLTV+++NV AAQQGIVYIDE
Sbjct: 348 TLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDE 407
Query: 404 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILF 463
VDKITKKAESLNISRDVSGEGVQQALLK+LEGT+VNVP KGARKHPRGD+IQIDTKDILF
Sbjct: 408 VDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILF 467
Query: 464 ICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGL 523
ICGGAFVD+EKTI +RRQDSSIGFGAPVRANM GVT +TSSL+E+VES+DL AYGL
Sbjct: 468 ICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGL 527
Query: 524 IPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNG-QAAFYGKCFEI 579
IPEFVGRFP+LVSL ALTE+QL++VL EPKNALGKQY+K+F MN + F K EI
Sbjct: 528 IPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEI 584
>gi|8978260|dbj|BAA98151.1| CLP protease regulatory subunit CLPX-like [Arabidopsis thaliana]
Length = 608
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 262/306 (85%), Gaps = 2/306 (0%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTPKEIC+GLD+FVIGQE+AKKVLSVAVYNHY RIY+ S +K SA ES + + +
Sbjct: 196 KLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNI 255
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQAGYVGEDVESILYKL
Sbjct: 256 DHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKL 315
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV--P 441
+ NV AQ+GIVYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGTVV+V P
Sbjct: 316 YVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIP 375
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
EKG R+ PRGD+IQ+DTKDILFICGGAF+D+EKT+SER+ D+SIGFGA VR NM G++
Sbjct: 376 EKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLS 435
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
A VTSSL+E+++S DL+AYGLIPEFVGR P+LVSL AL E+QLVQVLTEPK+ALGKQY+
Sbjct: 436 SAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYK 495
Query: 562 KMFQMN 567
K+F+MN
Sbjct: 496 KLFRMN 501
>gi|222619642|gb|EEE55774.1| hypothetical protein OsJ_04339 [Oryza sativa Japonica Group]
Length = 572
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/306 (72%), Positives = 258/306 (84%), Gaps = 9/306 (2%)
Query: 271 ICKGLDKFVIGQERAKKVL---------SVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+C+ LD+FVIGQ +AKKVL SVAVYNHY RIYN + QK + S
Sbjct: 1 MCRRLDEFVIGQGKAKKVLEGACQNWVLSVAVYNHYKRIYNATVQKGCSTNSGWLDAASD 60
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D + +E++KSN+LLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGYVGEDVESIL
Sbjct: 61 DQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQ 120
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL ++YNV AAQQGIVYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEGTVV++P
Sbjct: 121 KLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEGTVVSIP 180
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
EKG+RK+ R ++IQIDTKDILFICGGAFVD+EKTISERRQDSSIGFGAP+R NMR+ VT
Sbjct: 181 EKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRINMRSSEVT 240
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D +VTSSL+E+VES DL YGLIPEF+GR P+LVSL AL E+QLVQVLTEPKN+L +QYR
Sbjct: 241 DPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLVQVLTEPKNSLSRQYR 300
Query: 562 KMFQMN 567
KMF +N
Sbjct: 301 KMFSLN 306
>gi|240256421|ref|NP_568714.4| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|332008480|gb|AED95863.1| ATP-dependent Clp protease [Arabidopsis thaliana]
Length = 608
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 261/306 (85%), Gaps = 2/306 (0%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTPKEIC+GLD+FVIGQE+AKKVLSVAVYNHY RIY+ S +K SA ES + + +
Sbjct: 196 KLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNI 255
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESILYKL
Sbjct: 256 DHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKL 315
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV--P 441
+ NV AQ+GIVYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGTVV+V P
Sbjct: 316 YVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIP 375
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
EKG R+ PRGD+IQ+DTKDILFICGGAF+D+EKT+SER+ D+SIGFGA VR NM G++
Sbjct: 376 EKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLS 435
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
A VTSSL+E+++S DL+AYGLIPEFVGR P+LVSL AL E+QLVQVLTEPK+ALGKQY+
Sbjct: 436 SAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYK 495
Query: 562 KMFQMN 567
K+F+MN
Sbjct: 496 KLFRMN 501
>gi|297792267|ref|XP_002864018.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
lyrata]
gi|297309853|gb|EFH40277.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/304 (71%), Positives = 257/304 (84%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTPKEIC+GLD+FVIGQE+AKKVLSVAVYNHY RIY+ S +K S + + +
Sbjct: 195 KLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGFVSRSDNLDMEDENI 254
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQAGYVGEDVESILYKL
Sbjct: 255 DHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKL 314
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ NV AQ+GIVYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGTVV +PEK
Sbjct: 315 YVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVPIPEK 374
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G R+ PRGD+IQ+DTKDILFICGGAF+D+EKT+SER+ D+SIGFGA VR NM G + A
Sbjct: 375 GLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGFSSA 434
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
VTSSL+E+++S DL+AYGLIPEFVGR P+LVSL AL E+QLVQVLTEPK+ALGKQY+K+
Sbjct: 435 AVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKL 494
Query: 564 FQMN 567
F+MN
Sbjct: 495 FRMN 498
>gi|413922727|gb|AFW62659.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922728|gb|AFW62660.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922729|gb|AFW62661.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922730|gb|AFW62662.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
Length = 346
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/232 (89%), Positives = 224/232 (96%)
Query: 336 MGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQ 395
MGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+D+NV AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 396 QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQ 455
QG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 456 IDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVES 515
IDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRANMRAGG++ A VTSSL+E+VES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVES 180
Query: 516 SDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVL EPKNALGKQ++K+F MN
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLIEPKNALGKQFKKLFSMN 232
>gi|413922731|gb|AFW62663.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
Length = 324
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/232 (89%), Positives = 224/232 (96%)
Query: 336 MGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQ 395
MGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+D+NV AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 396 QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQ 455
QG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 456 IDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVES 515
IDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRANMRAGG++ A VTSSL+E+VES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVES 180
Query: 516 SDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVL EPKNALGKQ++K+F MN
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLIEPKNALGKQFKKLFSMN 232
>gi|226532215|ref|NP_001140773.1| uncharacterized protein LOC100272848 [Zea mays]
gi|194701024|gb|ACF84596.1| unknown [Zea mays]
Length = 346
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/232 (89%), Positives = 223/232 (96%)
Query: 336 MGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQ 395
MGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+D+NV AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 396 QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQ 455
QG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 456 IDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVES 515
IDTKDILFICGGAFVD+EKTISERRQDSSIGFGAPVRANMR GG + A VTSSL+E+VES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVES 180
Query: 516 SDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
DLIAYGLIPEF+GRFP+LVSL AL E+QLVQVLTEPKNALGKQ++K+F MN
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLTALNEDQLVQVLTEPKNALGKQFKKLFSMN 232
>gi|238005674|gb|ACR33872.1| unknown [Zea mays]
Length = 362
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/242 (84%), Positives = 231/242 (95%)
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VELEKSNIL+MGPTGSGKTLLAKTLAR+VNVPFVIADAT+LTQAGYVGEDVESILYKLL
Sbjct: 2 VELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESILYKLLA 61
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+D++VAAAQQGIVYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGTVV+VPEKGA
Sbjct: 62 AADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVSVPEKGA 121
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
R+HPRGDNIQIDTK+ILFICGGAFVD+EKTISERR DSSIGF A VR+NMR+GGV +A +
Sbjct: 122 RRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSGGVINAEI 181
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
TSSL+++VES DLIAYGLIPEFVGRFP+LV L +L+E+QLV+VLTEPKNALG+QY K+F+
Sbjct: 182 TSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGRQYTKLFE 241
Query: 566 MN 567
MN
Sbjct: 242 MN 243
>gi|357498615|ref|XP_003619596.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
gi|355494611|gb|AES75814.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
Length = 386
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/246 (86%), Positives = 235/246 (95%)
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DD+ VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFVIADATTLTQAGYVGEDVESILY
Sbjct: 16 DDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILY 75
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL +DYNVAAAQQGI+YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVP
Sbjct: 76 KLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 135
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
EKGARK+PRGDNIQIDTK+ILFICGGAF+D+EKTISERRQDSSIGFGAPVRAN+R+G +
Sbjct: 136 EKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANIRSGRII 195
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D+ V SSL+E+VESSDLIAYGLIPEF+GRFP+LVSL ALTE QL+QVLTEPK+ALGKQY+
Sbjct: 196 DSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKHALGKQYK 255
Query: 562 KMFQMN 567
K+ MN
Sbjct: 256 KLVGMN 261
>gi|357128686|ref|XP_003566001.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 485
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/305 (63%), Positives = 233/305 (76%), Gaps = 1/305 (0%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS-CTTDGVD 322
+FPTPKEI +GLD+FV+GQ++AKKVL VAV+NHY RIYNE S SA S++ C
Sbjct: 33 RFPTPKEIRRGLDQFVVGQDKAKKVLCVAVHNHYKRIYNEPSSNNSAVTSAADCNVSTSG 92
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD +ELEKSNILL+GPTGSGKTLLAKTLAR+ NVPFVIADAT +TQAGY GEDVESILYK
Sbjct: 93 DDDIELEKSNILLIGPTGSGKTLLAKTLARFANVPFVIADATAITQAGYSGEDVESILYK 152
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +D NV AA++GI+YIDEVDK+TKK RD+SGEGVQQALLKM EGTV+NVP
Sbjct: 153 LLAAADCNVEAAERGIIYIDEVDKLTKKVGCQEDWRDISGEGVQQALLKMFEGTVINVPR 212
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
K + +++DTK+ILFICGGAF D+ K ISER GFG P ++ T+
Sbjct: 213 KRNQHSVSHGYVEVDTKNILFICGGAFSDLGKIISERHHRCPFGFGTPKCRELQDYASTN 272
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
A+ SSL+E +E+ DLIAYGL PEF+GR P+ V L LTE+QL+QVL EPKNA+GKQY+K
Sbjct: 273 ALEESSLLEVIENDDLIAYGLTPEFIGRLPITVGLAHLTEDQLIQVLREPKNAIGKQYKK 332
Query: 563 MFQMN 567
F+MN
Sbjct: 333 WFKMN 337
>gi|384250570|gb|EIE24049.1| ClpX, ATPase regulatory subunit [Coccomyxa subellipsoidea C-169]
Length = 570
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/327 (60%), Positives = 246/327 (75%), Gaps = 23/327 (7%)
Query: 241 GGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI 300
GGS S GS W S K PTP++I LDKF++GQE KK L+VAVYNHYMR+
Sbjct: 176 GGSTSSTAEGSYR-LWDPS----KVPTPRKIVAALDKFIVGQEATKKTLAVAVYNHYMRV 230
Query: 301 YNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVI 360
+E +++ A E VELEKSN+LL+GPTG+GKTLLAKTLAR V VPF +
Sbjct: 231 AHEEQRRKRAQERQ-----------VELEKSNVLLLGPTGTGKTLLAKTLARLVEVPFAM 279
Query: 361 ADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDV 420
ADATTLTQAGYVG+DVESILYKLL YN+ AQ+GIV DKI KK+E+++I+RDV
Sbjct: 280 ADATTLTQAGYVGDDVESILYKLLQSCSYNLQVAQRGIV-----DKIVKKSENISITRDV 334
Query: 421 SGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERR 480
SGEGVQQALLKMLEGTV+NVPEKG RK+PRGD +Q+DTKDILFICGGAF+ +++ ++ER
Sbjct: 335 SGEGVQQALLKMLEGTVMNVPEKGGRKNPRGDFLQVDTKDILFICGGAFIGLDRQVAERT 394
Query: 481 QDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLAL 540
SSIGFG PVRA ++ G V+S++++ VE +DLI YGLIPEFVGRFP++ SL AL
Sbjct: 395 AMSSIGFGNPVRAKIQ--GFGQPKVSSNVLKQVEQTDLIQYGLIPEFVGRFPIISSLQAL 452
Query: 541 TENQLVQVLTEPKNALGKQYRKMFQMN 567
TE++L++VLT P+NAL +QY MF M+
Sbjct: 453 TEDELMEVLTRPRNALSRQYEAMFGMS 479
>gi|218197157|gb|EEC79584.1| hypothetical protein OsI_20758 [Oryza sativa Indica Group]
Length = 495
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/305 (60%), Positives = 235/305 (77%), Gaps = 3/305 (0%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD- 322
+FPTPKEI +GLD+FV+GQ++AKKVL VAV+NHY RIY+ESS + +SS+C +
Sbjct: 45 RFPTPKEIRRGLDEFVVGQDKAKKVLCVAVHNHYKRIYSESSN--CSMKSSACGDVSMSG 102
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD +ELEKSNILL+GPTGSGKTLLAKTLAR+ +VPFVIADAT +TQAGY GEDVESI+
Sbjct: 103 DDDIELEKSNILLIGPTGSGKTLLAKTLARFADVPFVIADATAITQAGYSGEDVESIICN 162
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL + +NV A ++GIVYIDEVDK+ KK E RDVSGEGVQ ALLK+ EGTV+NVP
Sbjct: 163 LLAAAKFNVEATERGIVYIDEVDKLIKKVECNEDRRDVSGEGVQHALLKIFEGTVINVPR 222
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
K + ++++TK+ILFICGG+F +EK +SER ++ +GFG P ++R G T+
Sbjct: 223 KRNQDSISDGYVEVNTKNILFICGGSFSGLEKIVSERHRNCHMGFGLPTSGDLRNCGWTN 282
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
A+ S +E +ES DLIAYGLIPEF+GR P+ V L L+E QLVQVL EPKNA+GKQY+K
Sbjct: 283 AIGESCCVEAIESDDLIAYGLIPEFIGRLPITVGLNDLSEAQLVQVLMEPKNAIGKQYKK 342
Query: 563 MFQMN 567
+F+MN
Sbjct: 343 LFKMN 347
>gi|145341067|ref|XP_001415637.1| mitochondrial ClpX chaperone [Ostreococcus lucimarinus CCE9901]
gi|144575860|gb|ABO93929.1| mitochondrial ClpX chaperone [Ostreococcus lucimarinus CCE9901]
Length = 524
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/349 (54%), Positives = 248/349 (71%), Gaps = 20/349 (5%)
Query: 243 SGSGFGSGSKDGCWG--GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI 300
S G +G+ DG G S + PTPKE+ + LD++++GQ AKKVLSVAVYNHY R+
Sbjct: 86 STGGTRAGANDGAGGERTSYAVDDLPTPKEMVRVLDEYIVGQAHAKKVLSVAVYNHYKRV 145
Query: 301 YNESSQKRSAGESSSCTTDGVDD----------------DTVELEKSNILLMGPTGSGKT 344
E +R A E+S+ +D+ D V LEKSNILL GPTGSGKT
Sbjct: 146 GAEG--ERRAREASAAFAQRLDEEDGAFEDENVVDENSLDDVTLEKSNILLCGPTGSGKT 203
Query: 345 LLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEV 404
LLAKTLA++ NVPF IAD+TTLTQAGYVGEDVESIL+KLL ++Y+V AAQ+GIVYIDE+
Sbjct: 204 LLAKTLAKFANVPFAIADSTTLTQAGYVGEDVESILHKLLQNANYDVQAAQRGIVYIDEI 263
Query: 405 DKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFI 464
DK+++K+++++I+RDVSGEGVQQALLKM+EGT VNVPEKG RK+P +Q+DT +ILFI
Sbjct: 264 DKLSRKSDNVSITRDVSGEGVQQALLKMVEGTTVNVPEKGGRKNPNSQFVQLDTTNILFI 323
Query: 465 CGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLI 524
CGGAF +E I +R SSIGFG PV A + ++ VE+ D+++YGLI
Sbjct: 324 CGGAFTGLESVIQQRLSKSSIGFGKPVIARDEPNSKQAVEAAAKALQEVETGDIVSYGLI 383
Query: 525 PEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGQAAFY 573
PEFVGRFPV V L AL E +LV +LT+P++A+GKQY+++ +M+G Y
Sbjct: 384 PEFVGRFPVCVPLSALGEKELVDILTKPRDAVGKQYQRLLEMHGADLTY 432
>gi|308799613|ref|XP_003074587.1| CLP protease regulatory subunit CLPX (ISS) [Ostreococcus tauri]
gi|116000758|emb|CAL50438.1| CLP protease regulatory subunit CLPX (ISS) [Ostreococcus tauri]
Length = 506
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 178/315 (56%), Positives = 239/315 (75%), Gaps = 9/315 (2%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK-RSAGESSSCTTDGV 321
++ PTP+++ + LD++++GQ AKKVLSVAVYNHY R+ ES Q+ R A + S+ +
Sbjct: 97 DELPTPRQMVRVLDEYIVGQAHAKKVLSVAVYNHYKRVGAESEQRAREAADLSAVERELE 156
Query: 322 DD--------DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+D D V LEKSNI+L GPTGSGKTLLAKTLA++ NVPF IAD+TTLTQAGYVG
Sbjct: 157 NDRTESANSFDDVTLEKSNIILCGPTGSGKTLLAKTLAKFANVPFAIADSTTLTQAGYVG 216
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVESIL+KLL ++++V AAQ+GIVYIDE+DK+ +K+++++++RDVSGEGVQQALLKM+
Sbjct: 217 EDVESILHKLLQNANFDVNAAQRGIVYIDEIDKLARKSDTVSVTRDVSGEGVQQALLKMV 276
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTVVNVPEKG RK+P + +DT +ILFICGGAF +E I +R+ SSIGFG PV A
Sbjct: 277 EGTVVNVPEKGGRKNPNSQFVPLDTANILFICGGAFTGLENVIQQRQSKSSIGFGKPVSA 336
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ M+ VE+ D+++YGLIPEFVGRFPV V L AL E +LV +LT+P+
Sbjct: 337 RDEPNSKEAIEAAAKAMQEVETGDIVSYGLIPEFVGRFPVCVPLQALGEKELVDILTKPR 396
Query: 554 NALGKQYRKMFQMNG 568
+A+GKQ++++ M+G
Sbjct: 397 DAIGKQFQRLMDMHG 411
>gi|326504532|dbj|BAJ91098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 181/299 (60%), Positives = 227/299 (75%), Gaps = 2/299 (0%)
Query: 269 KEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVEL 328
KEI +GLD++V+GQ++AKKVL VAV+NHY RIY+E S K S+ S+ +D EL
Sbjct: 47 KEIRRGLDQYVVGQDKAKKVLCVAVHNHYKRIYSEPSNKSSSQASAGRDAGTAAEDDTEL 106
Query: 329 EKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSD 388
EKSNILL+GPTGSGKTLLAKTLAR+ NVPFVIADAT +TQAGY GEDVESI+YKLL +D
Sbjct: 107 EKSNILLLGPTGSGKTLLAKTLARFANVPFVIADATAVTQAGYSGEDVESIVYKLLVAAD 166
Query: 389 YNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKH 448
+NV AA++GI+YIDEVDK+ KK RDVSGEGVQQALLKM EGTV++VP K ++
Sbjct: 167 FNVEAAERGIIYIDEVDKLAKKVGCQEDRRDVSGEGVQQALLKMFEGTVISVPRKRSQNG 226
Query: 449 PRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSS 508
+++DT +ILFICGGAF D+ K ISER GFG P+R +R + + SS
Sbjct: 227 LSHGCVEVDTTNILFICGGAFSDLGKIISERLHHCPFGFGTPIRHELRDYALMNE--QSS 284
Query: 509 LMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
L E +E+ DLIAYGL PEF+GR P++V L LTE+QL+QV+ EPKNA+GKQY+K+F+MN
Sbjct: 285 LFEEIENDDLIAYGLTPEFIGRLPIIVGLTHLTEDQLIQVIREPKNAIGKQYKKLFKMN 343
>gi|406942058|gb|EKD74393.1| hypothetical protein ACD_44C00469G0003 [uncultured bacterium]
Length = 422
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 183/309 (59%), Positives = 227/309 (73%), Gaps = 23/309 (7%)
Query: 260 NLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTD 319
N +K PTP EICK LD++VIGQ AKK LSVAVYNHY ++ N+
Sbjct: 58 NTLSKLPTPAEICKILDEYVIGQSIAKKTLSVAVYNHYKKLRNKHK-------------- 103
Query: 320 GVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I
Sbjct: 104 ---DGDVELNKSNILLIGPTGSGKTLLAETLARLLNVPFVIADATTLTEAGYVGEDVENI 160
Query: 380 LYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
+ KLL DY+VA AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +
Sbjct: 161 IQKLLQKCDYDVAKAQTGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVAS 220
Query: 440 VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGG 499
VP +G RKHP+ + IQ+DTK+ILFICGGAF +EK I ER + S IGF A + +
Sbjct: 221 VPPQGGRKHPQQEFIQVDTKNILFICGGAFAGLEKVIRERSEKSGIGFSAEIHSK----- 275
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
DA L+ VE +DLI +GLIPE +GR PV+ +L L + L+++LTEPKNAL KQ
Sbjct: 276 -EDAKSIDQLLHEVEPADLIRFGLIPELIGRLPVVATLEELDKEVLLRILTEPKNALVKQ 334
Query: 560 YRKMFQMNG 568
YRK+F+M G
Sbjct: 335 YRKLFEMEG 343
>gi|386828605|ref|ZP_10115712.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Beggiatoa
alba B18LD]
gi|386429489|gb|EIJ43317.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Beggiatoa
alba B18LD]
Length = 427
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 230/310 (74%), Gaps = 22/310 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
+N K PTP EI + LD++VIGQE AKKVLSVAVYNHY R+ + ++K
Sbjct: 61 ANARRKLPTPHEIHQHLDEYVIGQEHAKKVLSVAVYNHYKRVETQLNKK----------- 109
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
+ VE+ KSNILL+GPTGSGKTLLA+TLAR++NVPF +ADATTLT+AGYVGEDVE+
Sbjct: 110 -----NEVEIAKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVEN 164
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL DY+V AQ GI+YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 165 IIQKLLQKCDYDVEKAQTGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIA 224
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP+ + +Q+DT ++LFICGGAF +EK I R + S IGF A VR+N
Sbjct: 225 SVPPQGGRKHPQQEFLQVDTTNMLFICGGAFAGLEKVIRARSEKSGIGFSAEVRSNDDKR 284
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+T+ L+ VE DLI YGLIPEF+GR P++ +L LTE QLV++L EPKNAL K
Sbjct: 285 NITE------LLHGVEPEDLIKYGLIPEFIGRLPIITTLEELTEEQLVKILVEPKNALTK 338
Query: 559 QYRKMFQMNG 568
QY K+F+M G
Sbjct: 339 QYIKLFEMEG 348
>gi|331005197|ref|ZP_08328591.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC1989]
gi|330420979|gb|EGG95251.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC1989]
Length = 433
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/312 (58%), Positives = 234/312 (75%), Gaps = 22/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GGS+ K PTPKEI + LD++VIGQ RAK+VLSVAVYNHY R+
Sbjct: 63 GGSD---KLPTPKEITEILDQYVIGQFRAKRVLSVAVYNHYKRL-------------RFG 106
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
T G D DTVEL KSNIL++GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDV
Sbjct: 107 DTAGKDKDTVELGKSNILMVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDV 166
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 167 ENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 226
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V +VP +G RKHP+ + +Q+DT +ILF+CGGAF ++K I +R + IGF A V+
Sbjct: 227 VASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKVIRDRSEKGGIGFNAVVKNKEE 286
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ GV +A ++ +ES DL+AYGLIPEFVGR P++ +L L E L+Q+LTEPKN+L
Sbjct: 287 SKGVGEA------LKELESEDLVAYGLIPEFVGRLPMIATLEELDEQALIQILTEPKNSL 340
Query: 557 GKQYRKMFQMNG 568
KQY K+F+M G
Sbjct: 341 TKQYTKLFEMEG 352
>gi|350552165|ref|ZP_08921371.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiorhodospira
sibirica ATCC 700588]
gi|349795030|gb|EGZ48836.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiorhodospira
sibirica ATCC 700588]
Length = 427
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 182/307 (59%), Positives = 231/307 (75%), Gaps = 21/307 (6%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+ P P EI K LD++VIGQERAKKVLSVAVYNHY R+ AG +
Sbjct: 61 GSHLPKPHEIKKILDEYVIGQERAKKVLSVAVYNHYKRL--------EAGAVHA------ 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -KDDVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 KLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT +ILFICGGAF +EK I +R + S IGF A V++ + ++
Sbjct: 226 PQGGRKHPQQEFLQVDTHNILFICGGAFAGLEKVIRDRTEKSGIGFSAEVKS--KRSSLS 283
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
DA +L+ +E+ DL+ YGLIPEFVGR PVL +L L E LVQ+LTEP+NAL KQY+
Sbjct: 284 DA----ALLNHIEAEDLVKYGLIPEFVGRLPVLANLEELDEAALVQILTEPRNALTKQYQ 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFKMEG 346
>gi|372488838|ref|YP_005028403.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Dechlorosoma
suillum PS]
gi|359355391|gb|AEV26562.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Dechlorosoma
suillum PS]
Length = 424
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 183/304 (60%), Positives = 224/304 (73%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEIC LD++VIGQE AKK+LSVAVYNHY R+ R G+S+ D
Sbjct: 65 LPTPKEICSILDQYVIGQEVAKKILSVAVYNHYKRL-------RHQGKSA---------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYEVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +Q+DT +ILFICGGAF +EK I R IGFGA V++ D
Sbjct: 229 GRKHPNQDFVQVDTANILFICGGAFDGLEKVIRNRSTRGGIGFGAEVKSK------EDKK 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ TVE DLI +GLIPEFVGR PV+ +L L+E LV++L EPKNAL KQY+K+F
Sbjct: 283 AVGEVLRTVEPEDLIKFGLIPEFVGRLPVIATLDELSEAALVEILIEPKNALIKQYQKLF 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|330503118|ref|YP_004379987.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina NK-01]
gi|328917404|gb|AEB58235.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina NK-01]
Length = 426
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKKVLSVAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY
Sbjct: 285 ES------LREVEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|406937070|gb|EKD70637.1| hypothetical protein ACD_46C00464G0003 [uncultured bacterium]
Length = 428
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/305 (58%), Positives = 223/305 (73%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP EI LD++VIGQ +AKKVLSVAVYNHY R+ N + Q
Sbjct: 68 KLPTPTEIRTTLDEYVIGQTQAKKVLSVAVYNHYKRLRNHTKQ----------------- 110
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D +EL KSNILL+GPTGSGKTL+A+TLAR +NVPFVIADATTLT+AGYVGEDVESI+ KL
Sbjct: 111 DEIELNKSNILLIGPTGSGKTLMAETLARLLNVPFVIADATTLTEAGYVGEDVESIIQKL 170
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +Y+V+ AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 171 LQRCEYDVSKAQMGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIASVPPQ 230
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + IQ+DT++ILF+CGGAF +EK I +R + S IGF A + G DA
Sbjct: 231 GGRKHPQQEFIQVDTRNILFVCGGAFAGLEKIIRDRSEKSGIGFSAEIH------GKDDA 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L+ E +DLI YGLIPE +GR PV+ +L L + LV +L EPKNAL KQYRK+
Sbjct: 285 KTISDLLREAEPADLIKYGLIPELIGRLPVVATLEELDKQALVSILIEPKNALIKQYRKL 344
Query: 564 FQMNG 568
F M G
Sbjct: 345 FDMEG 349
>gi|146307079|ref|YP_001187544.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina ymp]
gi|421501786|ref|ZP_15948743.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina DLHK]
gi|166214806|sp|A4XTZ6.1|CLPX_PSEMY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145575280|gb|ABP84812.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
mendocina ymp]
gi|400347529|gb|EJO95882.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina DLHK]
Length = 426
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKKVLSVAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY
Sbjct: 285 ES------LREVEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|409426235|ref|ZP_11260797.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
HYS]
Length = 427
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 227/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQARSTRGGIGFGAEVRSKQEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|334129246|ref|ZP_08503051.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Methyloversatilis universalis FAM5]
gi|333445472|gb|EGK73413.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Methyloversatilis universalis FAM5]
Length = 421
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/312 (57%), Positives = 230/312 (73%), Gaps = 25/312 (8%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G S+ G+ P+PKEIC+ LD++VIGQ AK++L+VAVYNHY R+ + S +
Sbjct: 57 GKSSRGD-LPSPKEICEILDQYVIGQSPAKRILAVAVYNHYKRLRHMSRK---------- 105
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDV
Sbjct: 106 -------DEVELSKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDV 158
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL DY V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 159 ENIIQKLLQKCDYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 218
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V +VP +G RKHP D +Q+DT +ILF+CGGAF +EK I R + SIGFGA V++
Sbjct: 219 VASVPPQGGRKHPNQDFVQVDTTNILFVCGGAFDGLEKVIRNRTEHVSIGFGAEVKSR-- 276
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
D+ ++ VE DLI +GLIPEFVGR PV+ +L L E+ L+Q+L EPKNAL
Sbjct: 277 -----DSRSAGEALQDVEPEDLIKFGLIPEFVGRLPVVATLQELDEDALIQILIEPKNAL 331
Query: 557 GKQYRKMFQMNG 568
KQY+K+FQM G
Sbjct: 332 IKQYQKLFQMEG 343
>gi|406939454|gb|EKD72472.1| hypothetical protein ACD_45C00667G0003 [uncultured bacterium]
Length = 422
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 226/305 (74%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTP EICK LD++VIGQ AKK LSVAVYNHY ++ + +
Sbjct: 62 QLPTPAEICKILDEYVIGQSYAKKTLSVAVYNHYKKLRTKHK-----------------N 104
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ +EL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 NEIELNKSNILLVGPTGSGKTLLAETLARLLNVPFVIADATTLTEAGYVGEDVENIIQKL 164
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+VA AQ GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 165 LQKCDYDVAKAQTGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 224
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + IQ+DTK++LFICGGAF +EK I ER + S IGF A + + D+
Sbjct: 225 GGRKHPQQEFIQVDTKNMLFICGGAFAGLEKVIRERSERSGIGFSAEIHSK------EDS 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE +DLI +GLIPE +GR PV+ +L L + LV++LTEPKNAL KQYRK+
Sbjct: 279 KSIDQLLHEVEPADLIKFGLIPELIGRLPVVATLEELDKEALVRILTEPKNALVKQYRKL 338
Query: 564 FQMNG 568
F+M+G
Sbjct: 339 FEMDG 343
>gi|399520090|ref|ZP_10760871.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111982|emb|CCH37430.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 426
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKKVLSVAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATSLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY
Sbjct: 285 ES------LREVEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|429333162|ref|ZP_19213867.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
CSV86]
gi|428762168|gb|EKX84377.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
CSV86]
Length = 427
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 227/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISAILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I +R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYG 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|220934116|ref|YP_002513015.1| ATP-dependent protease ATP-binding subunit ClpX [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254763871|sp|B8GNT9.1|CLPX_THISH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219995426|gb|ACL72028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 425
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 179/311 (57%), Positives = 228/311 (73%), Gaps = 23/311 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G+ +G+K P P EI K LD++VIGQ+RAKK+L+VAVYNHY R+ +S+
Sbjct: 58 GAAVGDKLPKPHEIKKILDEYVIGQDRAKKILAVAVYNHYKRLEARNSK----------- 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 107 ------DEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 160
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL DY+V AQ GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 161 NIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTI 220
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFI GGAF ++K I +R + IGF A V++
Sbjct: 221 ASVPPQGGRKHPQQEFLQVDTHNILFIVGGAFAGLDKVIRDRTEKGGIGFSAKVKSKEEK 280
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
G V S + VE DLI YGLIPEFVGR PV+ +L L E+ L+Q+LTEPKNAL
Sbjct: 281 GPV------SRTLSGVEPEDLIKYGLIPEFVGRLPVVATLEELDEDALIQILTEPKNALT 334
Query: 558 KQYRKMFQMNG 568
KQY K+F+M G
Sbjct: 335 KQYGKLFEMEG 345
>gi|302878842|ref|YP_003847406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Gallionella
capsiferriformans ES-2]
gi|302581631|gb|ADL55642.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Gallionella
capsiferriformans ES-2]
Length = 416
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/319 (55%), Positives = 230/319 (72%), Gaps = 27/319 (8%)
Query: 252 KDGCWGGSNLGNK--FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRS 309
++ G + G+K P PK+IC LD++VIGQERAK++LSVAVYNHY R+
Sbjct: 48 REEIQGEAAKGDKTELPVPKDICATLDEYVIGQERAKRILSVAVYNHYKRL--------- 98
Query: 310 AGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQA 369
C TD D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+A
Sbjct: 99 -----KCNTD----DGVELAKSNILLVGPTGSGKTLLAQTLARMLDVPFVMADATTLTEA 149
Query: 370 GYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQAL 429
GYVGEDVE+I+ KLL DYNV AQ+GI+Y+DE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 150 GYVGEDVENIIQKLLQACDYNVEKAQRGIIYVDEIDKISRKSDNPSITRDVSGEGVQQAL 209
Query: 430 LKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGA 489
LK++EGT ++P +G RKHP + +Q+DT +ILFICGGAF +EK I R +SIGFGA
Sbjct: 210 LKLIEGTKASIPPQGGRKHPNTEFLQVDTTNILFICGGAFDGLEKVIRNRSSKASIGFGA 269
Query: 490 PVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVL 549
+R+ D T + VE DL+ +GLIPEFVGR PV+ +L L E + Q+L
Sbjct: 270 TIRS-------VDERKTGETLRDVEPEDLVKFGLIPEFVGRLPVIATLEELDEAAMKQIL 322
Query: 550 TEPKNALGKQYRKMFQMNG 568
TEPKNAL KQY+K+F+M G
Sbjct: 323 TEPKNALTKQYKKLFEMEG 341
>gi|422674864|ref|ZP_16734214.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aceris str. M302273]
gi|330972588|gb|EGH72654.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aceris str. M302273]
Length = 427
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLAKTLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAKTLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|121997403|ref|YP_001002190.1| ATP-dependent protease ATP-binding subunit ClpX [Halorhodospira
halophila SL1]
gi|167009016|sp|A1WUM6.1|CLPX_HALHL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|121588808|gb|ABM61388.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halorhodospira halophila SL1]
Length = 426
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/312 (56%), Positives = 225/312 (72%), Gaps = 23/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G + G P P EI + LD++VIGQE AKKVLSVAVYNHY R+ + +SQ
Sbjct: 58 GAATEGGGLPRPHEINRELDQYVIGQEHAKKVLSVAVYNHYKRLESRTSQ---------- 107
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDV
Sbjct: 108 -------DDVELTKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDV 160
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL DY+V AQ GIVYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 161 ENIIQKLLQKCDYDVEKAQHGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGT 220
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+VP +G RKHP+ + +Q+DT ++LFICGGAF ++K I ER + IGF A ++
Sbjct: 221 TASVPPQGGRKHPQQEFVQVDTSNMLFICGGAFAGLDKVIQERSERGGIGFSAEIKGEGE 280
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
V + ++TVE SDL+ YGLIPEFVGR PV+ +L L + LVQ+L EPKNAL
Sbjct: 281 RASVGET------LQTVEPSDLVRYGLIPEFVGRLPVIATLNELDQEALVQILREPKNAL 334
Query: 557 GKQYRKMFQMNG 568
KQY+K+F+M G
Sbjct: 335 VKQYQKLFEMEG 346
>gi|218247704|ref|YP_002373075.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
8801]
gi|257060959|ref|YP_003138847.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
8802]
gi|226706582|sp|B7JW74.1|CLPX_CYAP8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218168182|gb|ACK66919.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 8801]
gi|256591125|gb|ACV02012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 8802]
Length = 448
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/313 (56%), Positives = 229/313 (73%), Gaps = 16/313 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI K LD++VIGQ+ AKKVLSVAVYNHY R+ S GE +S
Sbjct: 80 NQIPKPREIKKYLDEYVIGQDEAKKVLSVAVYNHYKRL----SLASKPGEETS------- 128
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D +EL+KSNILLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 129 EDHIELQKSNILLMGPTGSGKTLLAQTLAQILDVPFAVADATTLTEAGYVGEDVENILLR 188
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP
Sbjct: 189 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPP 248
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV ++K I +RR S+GF P N +
Sbjct: 249 QGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIEQRRGKKSMGFIRPGDTNQ-----SK 303
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ LM+ E DL+ +G+IPEFVGR PV+ SL L E L+ +LT+P+NAL KQY+K
Sbjct: 304 EKRAADLMQQAEPDDLVKFGMIPEFVGRIPVMASLEPLDEETLIAILTQPRNALVKQYQK 363
Query: 563 MFQMNGQAAFYGK 575
+ +M+ + K
Sbjct: 364 LLKMDNVQLEFNK 376
>gi|325274290|ref|ZP_08140401.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
TJI-51]
gi|324100573|gb|EGB98308.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
TJI-51]
Length = 427
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/306 (59%), Positives = 225/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E LVQ+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALVQILTEPKNALTKQYA 339
Query: 562 KMFQMN 567
K+F+M
Sbjct: 340 KLFEME 345
>gi|229591361|ref|YP_002873480.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens SBW25]
gi|388466303|ref|ZP_10140513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
synxantha BG33R]
gi|440741132|ref|ZP_20920587.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens BRIP34879]
gi|447917343|ref|YP_007397911.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas poae
RE*1-1-14]
gi|259491265|sp|C3JYJ9.1|CLPX_PSEFS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229363227|emb|CAY50310.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Pseudomonas fluorescens SBW25]
gi|388009883|gb|EIK71070.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
synxantha BG33R]
gi|440373753|gb|ELQ10501.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens BRIP34879]
gi|445201206|gb|AGE26415.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas poae
RE*1-1-14]
Length = 427
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I +R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|218440072|ref|YP_002378401.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
7424]
gi|226706581|sp|B7KBH7.1|CLPX_CYAP7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218172800|gb|ACK71533.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7424]
Length = 447
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 229/304 (75%), Gaps = 15/304 (4%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P+EI K LD++VIGQ AKKVLSVAVYNHY R+ + +++ T G D
Sbjct: 79 QIPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQAKR---------TGTGATD 129
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 130 DPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 189
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP +
Sbjct: 190 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 249
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQIDT +ILFICGGAFV ++K + +R S+GF P A G +
Sbjct: 250 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIRP------AEGTSKE 303
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ L++ +E DL+ +G+IPEFVGR PV+ SL L E+ L+ +LT+P+NAL KQY+K+
Sbjct: 304 KWSADLLKQLEPDDLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPRNALVKQYQKL 363
Query: 564 FQMN 567
+M+
Sbjct: 364 LKMD 367
>gi|398847903|ref|ZP_10604777.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM84]
gi|398250861|gb|EJN36153.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM84]
Length = 427
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/306 (59%), Positives = 225/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVLSVAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLSVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMN 567
K+F+M
Sbjct: 340 KLFEME 345
>gi|408481158|ref|ZP_11187377.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
R81]
Length = 427
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I +R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|428201397|ref|YP_007079986.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pleurocapsa
sp. PCC 7327]
gi|427978829|gb|AFY76429.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pleurocapsa
sp. PCC 7327]
Length = 447
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 229/305 (75%), Gaps = 17/305 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P+EI K LD++VIGQ+ AKK+LSVAVYNHY R+ SQ R +G +
Sbjct: 80 DRIPKPREIKKYLDEYVIGQDDAKKILSVAVYNHYKRL--SVSQARKSG---------II 128
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD VEL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 129 DDPVELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLR 188
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 189 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 248
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV ++K + +R S+GF P G +
Sbjct: 249 QGGRKHPYQDCIQIDTSNILFICGGAFVGLDKMVEQRLGKKSMGFVRP------GEGTSK 302
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T+ L++ +E DL+ YG+IPEFVGR PV+ SL L E LV +LT+P+NAL KQY+K
Sbjct: 303 EKRTADLLKQLEPDDLVKYGMIPEFVGRIPVMASLDPLDEETLVAILTQPRNALVKQYQK 362
Query: 563 MFQMN 567
+ +M+
Sbjct: 363 LLKMD 367
>gi|398948872|ref|ZP_10672974.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM33]
gi|398160046|gb|EJM48328.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM33]
Length = 427
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDETALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|387894466|ref|YP_006324763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
fluorescens A506]
gi|423692341|ref|ZP_17666861.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens SS101]
gi|387159491|gb|AFJ54690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens A506]
gi|388000622|gb|EIK61951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens SS101]
Length = 427
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I +R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYG 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|398893208|ref|ZP_10646002.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM55]
gi|398184566|gb|EJM72012.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM55]
Length = 427
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|389681306|ref|ZP_10172651.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis O6]
gi|399007986|ref|ZP_10710480.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM17]
gi|425900380|ref|ZP_18876971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|388554842|gb|EIM18090.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis O6]
gi|397890343|gb|EJL06825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398119026|gb|EJM08742.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM17]
Length = 427
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|312961788|ref|ZP_07776286.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens WH6]
gi|311284047|gb|EFQ62630.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens WH6]
Length = 438
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 73 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 118
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 119 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 176
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 177 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 236
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I +R IGF A VR+ V
Sbjct: 237 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEGKKVG 296
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 297 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 350
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 351 KLFEMEG 357
>gi|398860149|ref|ZP_10615807.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM79]
gi|398867304|ref|ZP_10622768.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM78]
gi|398879705|ref|ZP_10634793.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM67]
gi|398886633|ref|ZP_10641500.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM60]
gi|398904000|ref|ZP_10652022.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM50]
gi|398938376|ref|ZP_10667779.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM41(2012)]
gi|398996367|ref|ZP_10699224.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM21]
gi|407364029|ref|ZP_11110561.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mandelii JR-1]
gi|398126898|gb|EJM16319.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM21]
gi|398165924|gb|EJM54034.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM41(2012)]
gi|398176429|gb|EJM64148.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM50]
gi|398188904|gb|EJM76193.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM60]
gi|398195849|gb|EJM82876.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM67]
gi|398235354|gb|EJN21185.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM79]
gi|398237282|gb|EJN23036.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM78]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|399002987|ref|ZP_10705661.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM18]
gi|398123673|gb|EJM13214.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM18]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|398871357|ref|ZP_10626672.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM74]
gi|398206298|gb|EJM93065.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM74]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|167032911|ref|YP_001668142.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
GB-1]
gi|189044143|sp|B0KJG7.1|CLPX_PSEPG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166859399|gb|ABY97806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida GB-1]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 225/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMN 567
K+F+M
Sbjct: 340 KLFEME 345
>gi|66044993|ref|YP_234834.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae B728a]
gi|237803595|ref|ZP_04591180.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|257483814|ref|ZP_05637855.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627505|ref|ZP_06460459.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289649944|ref|ZP_06481287.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 2250]
gi|289679416|ref|ZP_06500306.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae FF5]
gi|416015384|ref|ZP_11562997.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. B076]
gi|416028211|ref|ZP_11571267.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406895|ref|ZP_16483912.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422583544|ref|ZP_16658667.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422591340|ref|ZP_16665985.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422595335|ref|ZP_16669623.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422606344|ref|ZP_16678354.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. mori str. 301020]
gi|422630347|ref|ZP_16695545.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422645839|ref|ZP_16708974.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|422650230|ref|ZP_16713036.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|422664683|ref|ZP_16724556.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|422683345|ref|ZP_16741606.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|424066810|ref|ZP_17804272.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424071463|ref|ZP_17808888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|440721403|ref|ZP_20901802.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34876]
gi|440724450|ref|ZP_20904732.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34881]
gi|443644727|ref|ZP_21128577.1| ATP-dependent Clp protease, ATP-binding subunit [Pseudomonas
syringae pv. syringae B64]
gi|81308383|sp|Q4ZVM6.1|CLPX_PSEU2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|63255700|gb|AAY36796.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae B728a]
gi|298159271|gb|EFI00329.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320325362|gb|EFW81429.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327653|gb|EFW83661.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868374|gb|EGH03083.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330878773|gb|EGH12922.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330882124|gb|EGH16273.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330889996|gb|EGH22657.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. mori str. 301020]
gi|330939707|gb|EGH43002.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330959388|gb|EGH59648.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330963319|gb|EGH63579.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330975102|gb|EGH75168.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330985640|gb|EGH83743.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012680|gb|EGH92736.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331025577|gb|EGI05633.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|407998843|gb|EKG39241.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408001927|gb|EKG42202.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440363824|gb|ELQ00983.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34876]
gi|440370094|gb|ELQ07040.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34881]
gi|443284744|gb|ELS43749.1| ATP-dependent Clp protease, ATP-binding subunit [Pseudomonas
syringae pv. syringae B64]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|398919615|ref|ZP_10658870.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM49]
gi|398923823|ref|ZP_10660916.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM48]
gi|426408622|ref|YP_007028721.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
UW4]
gi|398169637|gb|EJM57615.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM49]
gi|398174660|gb|EJM62449.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM48]
gi|426266839|gb|AFY18916.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
UW4]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|148548676|ref|YP_001268778.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
F1]
gi|386012907|ref|YP_005931184.1| protein ClpX [Pseudomonas putida BIRD-1]
gi|395444304|ref|YP_006384557.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
ND6]
gi|397698113|ref|YP_006535996.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
putida DOT-T1E]
gi|421521991|ref|ZP_15968640.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
LS46]
gi|166214807|sp|A5W634.1|CLPX_PSEP1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148512734|gb|ABQ79594.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
putida F1]
gi|313499613|gb|ADR60979.1| ClpX [Pseudomonas putida BIRD-1]
gi|388558301|gb|AFK67442.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
ND6]
gi|397334843|gb|AFO51202.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
putida DOT-T1E]
gi|402754252|gb|EJX14737.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
LS46]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 225/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMN 567
K+F+M
Sbjct: 340 KLFEME 345
>gi|398840798|ref|ZP_10598030.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM102]
gi|398109810|gb|EJL99726.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM102]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|346643098|ref|YP_261086.2| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
protegens Pf-5]
gi|341580245|gb|AAY93250.2| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
protegens Pf-5]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -SDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|302187982|ref|ZP_07264655.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae 642]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|170720928|ref|YP_001748616.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
W619]
gi|229484079|sp|B1J693.1|CLPX_PSEPW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169758931|gb|ACA72247.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida W619]
Length = 427
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 225/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVLSVAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLSVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMN 567
++F+M
Sbjct: 340 RLFEME 345
>gi|28870880|ref|NP_793499.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213968835|ref|ZP_03396976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato T1]
gi|301384119|ref|ZP_07232537.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato Max13]
gi|302059518|ref|ZP_07251059.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato K40]
gi|302135031|ref|ZP_07261021.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|422660629|ref|ZP_16723037.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|38257469|sp|Q87YR7.1|CLPX_PSESM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28854129|gb|AAO57194.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213926438|gb|EEB59992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato T1]
gi|331019230|gb|EGH99286.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 427
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|422640407|ref|ZP_16703834.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae Cit 7]
gi|440746733|ref|ZP_20926013.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP39023]
gi|330952798|gb|EGH53058.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae Cit 7]
gi|440370993|gb|ELQ07858.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP39023]
Length = 427
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|380510629|ref|ZP_09854036.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
sacchari NCPPB 4393]
Length = 428
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/305 (58%), Positives = 229/305 (75%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ+RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSVERKREV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKILADVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMNG 568
F+M G
Sbjct: 343 FEMEG 347
>gi|71734283|ref|YP_273936.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|123637276|sp|Q48KY9.1|CLPX_PSE14 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71554836|gb|AAZ34047.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 427
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVDKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|256556953|gb|ACU83575.1| ATP-dependent protease Clp ATPase subunit [uncultured bacterium
HF130_AEPn_2]
Length = 427
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|423096201|ref|ZP_17083997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q2-87]
gi|423696405|ref|ZP_17670895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q8r1-96]
gi|388003112|gb|EIK64439.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q8r1-96]
gi|397884545|gb|EJL01028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q2-87]
Length = 427
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|330808573|ref|YP_004353035.1| ATP-dependent protease ATP-binding subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376681|gb|AEA68031.1| ATP-dependent protease ATP-binding subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 427
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|120554757|ref|YP_959108.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
aquaeolei VT8]
gi|387813880|ref|YP_005429363.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166214783|sp|A1U1Q2.1|CLPX_MARAV RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120324606|gb|ABM18921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinobacter
aquaeolei VT8]
gi|381338893|emb|CCG94940.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 427
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 228/306 (74%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + L+++VIGQ+RAK VLSVAVYNHY R+ GE S
Sbjct: 65 DRLPTPAEIRETLNEYVIGQDRAKVVLSVAVYNHYKRL--------RYGEGKS------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 --DVELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF ++K I ER + SSIGF A V++ D
Sbjct: 228 QGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ------DD 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ T ++ VE+ DL+ +GLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY+K
Sbjct: 282 SKSTGDIIREVETEDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQK 341
Query: 563 MFQMNG 568
+F M G
Sbjct: 342 LFDMEG 347
>gi|395649557|ref|ZP_10437407.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 427
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|213521160|gb|ACJ50517.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
SS101]
Length = 438
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 73 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 118
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 119 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 176
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 177 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 236
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I +R IGF A VR+ V
Sbjct: 237 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEGKKVG 296
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 297 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYG 350
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 351 KLFEMEG 357
>gi|339486804|ref|YP_004701332.1| ATP-dependent protease, ATP-binding subunit ClpX [Pseudomonas
putida S16]
gi|431801809|ref|YP_007228712.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
HB3267]
gi|338837647|gb|AEJ12452.1| ATP-dependent protease, ATP-binding subunit ClpX [Pseudomonas
putida S16]
gi|430792574|gb|AGA72769.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
HB3267]
Length = 427
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 225/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMN 567
K+F+M
Sbjct: 340 KLFEME 345
>gi|77459918|ref|YP_349425.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens Pf0-1]
gi|398974166|ref|ZP_10684903.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM25]
gi|123730994|sp|Q3K9X0.1|CLPX_PSEPF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77383921|gb|ABA75434.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Pseudomonas fluorescens Pf0-1]
gi|398142050|gb|EJM30955.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM25]
Length = 427
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKKA------------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|26989025|ref|NP_744450.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
KT2440]
gi|38257486|sp|Q88KI9.1|CLPX_PSEPK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|24983848|gb|AAN67914.1|AE016423_9 ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida KT2440]
Length = 442
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 225/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 77 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 122
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 123 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 180
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 181 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 240
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 241 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 300
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 301 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 354
Query: 562 KMFQMN 567
K+F+M
Sbjct: 355 KLFEME 360
>gi|398849722|ref|ZP_10606451.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM80]
gi|398966270|ref|ZP_10681429.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM30]
gi|398985562|ref|ZP_10691097.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM24]
gi|399015405|ref|ZP_10717678.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM16]
gi|424922479|ref|ZP_18345840.1| ClpX [Pseudomonas fluorescens R124]
gi|398108656|gb|EJL98609.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM16]
gi|398146238|gb|EJM34994.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM30]
gi|398153941|gb|EJM42432.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM24]
gi|398250437|gb|EJN35757.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM80]
gi|404303639|gb|EJZ57601.1| ClpX [Pseudomonas fluorescens R124]
Length = 427
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKKA------------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|424795847|ref|ZP_18221655.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|433679139|ref|ZP_20510915.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440731336|ref|ZP_20911361.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens DAR61454]
gi|422795261|gb|EKU23984.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|430815743|emb|CCP41465.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440373298|gb|ELQ10057.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens DAR61454]
Length = 428
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/305 (59%), Positives = 228/305 (74%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQ RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPKEILEVLDQYVIGQLRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDVGGIGFGAKVKSSERKREV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPKNAITKQFKKL 342
Query: 564 FQMNG 568
F+M G
Sbjct: 343 FEMEG 347
>gi|378951823|ref|YP_005209311.1| protein ClpX [Pseudomonas fluorescens F113]
gi|359761837|gb|AEV63916.1| ClpX [Pseudomonas fluorescens F113]
Length = 427
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -SDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|395495007|ref|ZP_10426586.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
PAMC 25886]
gi|395794595|ref|ZP_10473916.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Ag1]
gi|421137892|ref|ZP_15597968.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
BBc6R8]
gi|395341260|gb|EJF73080.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Ag1]
gi|404510951|gb|EKA24845.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
BBc6R8]
Length = 427
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -SDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|404399558|ref|ZP_10991142.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fuscovaginae UPB0736]
Length = 427
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -SDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFTAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|254448887|ref|ZP_05062343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium HTCC5015]
gi|198261577|gb|EDY85866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium HTCC5015]
Length = 426
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 177/312 (56%), Positives = 229/312 (73%), Gaps = 27/312 (8%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G +NL PTP EI + LD +VIGQERAKKVLSVAVYNHY R+ ESSQ+
Sbjct: 61 GDTNL----PTPHEIKQRLDDYVIGQERAKKVLSVAVYNHYKRM--ESSQR--------- 105
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
+D +EL KSNILL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDV
Sbjct: 106 ------NDEIELSKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDV 159
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL DY+V AQ+GIVYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 160 ENIIQKLLQKCDYDVEKAQRGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGT 219
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V +VP +G RKHP+ + +Q+DT +ILFICGGAF ++K I ER + IGF A V+
Sbjct: 220 VASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSEKGGIGFAAEVKTE-- 277
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
D + L+ VE DL+ YGLIPEF+GR PV+ +L L E L+++LT+PKNA+
Sbjct: 278 ----EDDLAIGQLLHEVEPEDLVKYGLIPEFIGRLPVVATLEELGEEALIEILTQPKNAI 333
Query: 557 GKQYRKMFQMNG 568
KQ++ +F+M G
Sbjct: 334 IKQFKYLFEMEG 345
>gi|389756356|ref|ZP_10191466.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
115]
gi|388431604|gb|EIL88662.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
115]
Length = 432
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 230/305 (75%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P PKEI + L+++V+GQ RAKK LSVAVYNHY R+ ES QK +
Sbjct: 65 QLPKPKEIMETLNQYVVGQTRAKKALSVAVYNHYKRM--ESRQK---------------N 107
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 167
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVDKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQ 227
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DTK+ILFICGGAF +EK I +R + + IGFGA VR+ R +
Sbjct: 228 GGRKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSETTGIGFGAEVRSKERTENL--- 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE +DL+ +GLIPEFVGR PV+ +L L E+ LV++LTEP+NA+ KQ++++
Sbjct: 285 ---GKLLAEVEPADLVRFGLIPEFVGRLPVVATLDELDEDALVKILTEPRNAVTKQFKRL 341
Query: 564 FQMNG 568
F+M G
Sbjct: 342 FEMEG 346
>gi|388547448|ref|ZP_10150713.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M47T1]
gi|388274535|gb|EIK94132.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M47T1]
Length = 427
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTAGGIGFNAEVRSKQEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|421849602|ref|ZP_16282580.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
NBRC 101655]
gi|421853138|ref|ZP_16285817.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459663|dbj|GAB27783.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
NBRC 101655]
gi|371478598|dbj|GAB31020.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 378
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 177/302 (58%), Positives = 229/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ +AKKVLSVAV+NHY R+ +Q AG+
Sbjct: 20 PTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRL----TQVAKAGD------------- 62
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 63 VEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 122
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 123 ASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 182
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + ++IGFGA VRA D
Sbjct: 183 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA-------PDERK 235
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LTEPKNAL KQY+++FQ
Sbjct: 236 TGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNALVKQYQRLFQ 295
Query: 566 MN 567
M
Sbjct: 296 ME 297
>gi|15606540|ref|NP_213920.1| ATP-dependent protease ATP-binding subunit ClpX [Aquifex aeolicus
VF5]
gi|6225162|sp|O67356.1|CLPX_AQUAE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|2983756|gb|AAC07316.1| ATP-dependent protease ATPase subunit clpX [Aquifex aeolicus VF5]
Length = 412
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 228/306 (74%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P++I K LD++VIGQERAKK+LSVAVYNHY RI + + G+ D
Sbjct: 59 IPKPEQIKKILDEYVIGQERAKKILSVAVYNHYKRIKAKEA--------------GLSLD 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VELEKSNILL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE++L +LL
Sbjct: 105 DVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRLL 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTVVNVPE 442
DY+V AAQ+GIVYIDE+DKI KK+ +N I+RDVSGEGVQQALLK++EG+VVNVP
Sbjct: 165 QACDYDVKAAQKGIVYIDEIDKIAKKS-GINPSITRDVSGEGVQQALLKIVEGSVVNVPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQ+DT DILFICGGAFV +E I +R S +GF A ++ +
Sbjct: 224 QGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDK------ 277
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+E VE DLI +G+IPEF+GRFPV+ +L LTE++LV++L EPKNAL KQY+K
Sbjct: 278 ---EQDLLELVEPDDLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPKNALVKQYQK 334
Query: 563 MFQMNG 568
+F++ G
Sbjct: 335 LFELEG 340
>gi|110834072|ref|YP_692931.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
borkumensis SK2]
gi|123345580|sp|Q0VQ89.1|CLPX_ALCBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110647183|emb|CAL16659.1| ATP-dependent Clp protease, ATP-binding subunitClpX [Alcanivorax
borkumensis SK2]
Length = 426
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 178/309 (57%), Positives = 228/309 (73%), Gaps = 26/309 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G + P P EI LD++VIGQERAKKVL+VAVYNHY R+ RS G+
Sbjct: 62 GERLPKPNEIKDTLDEYVIGQERAKKVLAVAVYNHYKRL-------RSGGKGR------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGG 499
+G RKHP+ + +Q+DT ++LFICGGAF ++K I ER + IGF A V++ N R G
Sbjct: 226 PQGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRERSEKGGIGFSAEVKSKDNTRNLG 285
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
L+ VE DL+ YGLIPEF+GR PV+ +L L+E+ L+Q+LTEP+NAL KQ
Sbjct: 286 --------ELLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALIQILTEPRNALTKQ 337
Query: 560 YRKMFQMNG 568
Y ++F+M G
Sbjct: 338 YARLFEMEG 346
>gi|389806652|ref|ZP_10203699.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
thiooxydans LCS2]
gi|388445304|gb|EIM01384.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
thiooxydans LCS2]
Length = 430
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 228/305 (74%), Gaps = 23/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P PKEI + LD++V+GQ RAKK L+VAVYNHY RI ES QK
Sbjct: 64 TQLPKPKEIRESLDQYVVGQTRAKKALAVAVYNHYKRI--ESRQK--------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 SDDIELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DTK+ILFICGGAF +EK I +R +++SIGF A VR+ R +
Sbjct: 227 QGGRKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSENTSIGFSAEVRSKERTENL-- 284
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ VE +DL+ +GLIPEFVGR PV+ +L L E LV++LTEPKNA+ KQ+++
Sbjct: 285 ----GKVLADVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAVTKQFKR 340
Query: 563 MFQMN 567
+F+M
Sbjct: 341 LFEME 345
>gi|337286232|ref|YP_004625705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfatator indicus DSM 15286]
gi|335359060|gb|AEH44741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfatator indicus DSM 15286]
Length = 415
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 229/306 (74%), Gaps = 28/306 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++V+GQE+AKK+LSVAV+NHY RI S + +GV
Sbjct: 61 IPKPSEIKAFLDQYVVGQEKAKKILSVAVHNHYKRI------------ESRVSLNGV--- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL+KSNI+L+GPTGSGKTLLA+TLA+++NVPF IADATTLT+AGYVGEDVE+I+ LL
Sbjct: 106 --ELQKSNIMLIGPTGSGKTLLAQTLAKFLNVPFTIADATTLTEAGYVGEDVENIILNLL 163
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V AQ+GIVYIDE+DKI KK +S +I+RDVSGEGVQQALLK+LEGTV NVP KG
Sbjct: 164 QAADYDVELAQRGIVYIDEIDKIAKKTDSPSITRDVSGEGVQQALLKILEGTVANVPPKG 223
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + I++DT +ILFICGGAFV +E+ I ER SIGFGA +++ +M G
Sbjct: 224 GRKHPQQEFIKVDTTNILFICGGAFVGLERIIKERLGQRSIGFGADIKSAKDMSIG---- 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ VE DLI +G+IPEFVGR P++ +L LTE +L+++LTEPKNAL KQY+K
Sbjct: 280 -----EILAHVEPEDLIKFGMIPEFVGRVPIVATLDELTEKELIKILTEPKNALTKQYQK 334
Query: 563 MFQMNG 568
+F+M+G
Sbjct: 335 LFEMDG 340
>gi|402699100|ref|ZP_10847079.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas fragi
A22]
Length = 427
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK + R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVVQARSTRGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYG 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|257455805|ref|ZP_05621031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enhydrobacter
aerosaccus SK60]
gi|257446819|gb|EEV21836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enhydrobacter
aerosaccus SK60]
Length = 427
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 178/320 (55%), Positives = 231/320 (72%), Gaps = 10/320 (3%)
Query: 247 FGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQ 306
GS D + K PTPKEI LD++VIGQ++AKK L+VAVYNHY R+ + S+
Sbjct: 49 LGSDGSDTNERENWAARKLPTPKEIRSHLDEYVIGQDKAKKTLAVAVYNHYKRL--KVSE 106
Query: 307 KRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTL 366
K S E + TT G +D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTL
Sbjct: 107 KLS--EDKALTTLGAEDAMVELSKSNILLIGPTGSGKTLLAQTLARLLDVPFALADATTL 164
Query: 367 TQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ 426
T+AGYVGEDVE+I+ KLL ++++V AQ+GI+YIDE+DKI++K+E+ +I+RDVSGEGVQ
Sbjct: 165 TEAGYVGEDVENIVQKLLQAAEFDVERAQKGIIYIDEIDKISRKSENPSITRDVSGEGVQ 224
Query: 427 QALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIG 486
QALLK++EGTV N+P +G RKHP + IQ+DT +IL ICGGAF ++ I +R + + IG
Sbjct: 225 QALLKLIEGTVANIPPQGGRKHPNQEMIQVDTSNILVICGGAFAGLDNVIQQRTEKTGIG 284
Query: 487 FGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLV 546
F A V+A T L + VE DLI +GLIPE +GR PV+ +L L E LV
Sbjct: 285 FNAEVKAKDSGKK------TGELFKQVEPEDLIKFGLIPELIGRLPVVATLEELDEEALV 338
Query: 547 QVLTEPKNALGKQYRKMFQM 566
Q+LTEPKNAL KQY +F+M
Sbjct: 339 QILTEPKNALVKQYEYLFEM 358
>gi|358637943|dbj|BAL25240.1| ATP-dependent protease ATP-binding subunit [Azoarcus sp. KH32C]
Length = 422
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 227/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
GNK PTP+EIC+ L+++VIGQ +AK++LSVAVYNHY R+ + S +K
Sbjct: 61 GNKLPTPQEICEILNQYVIGQPQAKRILSVAVYNHYKRLRHISGKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 165 KLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASIP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP D IQ+DT +ILFICGGAF +EK I R + IGFGA V++ R G
Sbjct: 225 PQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIRNRTEKIGIGFGAEVKS--RQGK-- 280
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S VE DL+ +GLIPEFVGR PV+ +L L E L+Q+L EPKNAL KQY+
Sbjct: 281 ---DVSESFRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEAALIQILIEPKNALVKQYQ 337
Query: 562 KMFQMNG 568
K+F M G
Sbjct: 338 KLFGMEG 344
>gi|329114675|ref|ZP_08243434.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacter
pomorum DM001]
gi|326696155|gb|EGE47837.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacter
pomorum DM001]
Length = 421
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/302 (58%), Positives = 229/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ +AKKVLSVAV+NHY R+ +Q AG+
Sbjct: 63 PTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRL----TQVAKAGD------------- 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + ++IGFGA VRA D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA-------PDERK 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LTEPKNAL KQY+++FQ
Sbjct: 279 TGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNALVKQYQRLFQ 338
Query: 566 MN 567
M
Sbjct: 339 ME 340
>gi|258542725|ref|YP_003188158.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01]
gi|384042646|ref|YP_005481390.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-12]
gi|384051163|ref|YP_005478226.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-03]
gi|384054271|ref|YP_005487365.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-07]
gi|384057505|ref|YP_005490172.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-22]
gi|384060146|ref|YP_005499274.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-26]
gi|384063438|ref|YP_005484080.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-32]
gi|384119448|ref|YP_005502072.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633803|dbj|BAH99778.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01]
gi|256636862|dbj|BAI02831.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-03]
gi|256639915|dbj|BAI05877.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-07]
gi|256642971|dbj|BAI08926.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-22]
gi|256646026|dbj|BAI11974.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-26]
gi|256649079|dbj|BAI15020.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-32]
gi|256652066|dbj|BAI18000.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655123|dbj|BAI21050.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-12]
Length = 421
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/302 (58%), Positives = 229/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ +AKKVLSVAV+NHY R+ +Q AG+
Sbjct: 63 PTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRL----TQVAKAGD------------- 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + ++IGFGA VRA D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA-------PDERK 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LTEPKNAL KQY+++FQ
Sbjct: 279 TGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNALVKQYQRLFQ 338
Query: 566 MN 567
M
Sbjct: 339 ME 340
>gi|91761999|ref|ZP_01263964.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1002]
gi|91717801|gb|EAS84451.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1002]
Length = 422
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 227/304 (74%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEIC LD +VIGQ AKKVLSVAV+NHY R+ E+ +
Sbjct: 59 LPPPKEICAVLDDYVIGQPHAKKVLSVAVHNHYKRLNYETKTSK---------------- 102
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
TVEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 103 TVELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 163 QAADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGFGA V+ TD
Sbjct: 223 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGANVKK-------TDDK 275
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T M+T+E DL+ YGLIPEF+GR P++ +L L E LV++L EPKN+L KQY+++F
Sbjct: 276 KTGEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLVKILQEPKNSLIKQYQELF 335
Query: 565 QMNG 568
+++G
Sbjct: 336 KLDG 339
>gi|71083580|ref|YP_266299.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062693|gb|AAZ21696.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1062]
Length = 422
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 227/304 (74%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEIC LD +VIGQ AKKVLSVAV+NHY R+ E+ +
Sbjct: 59 LPPPKEICAVLDDYVIGQPHAKKVLSVAVHNHYKRLNYETKTSK---------------- 102
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
TVEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 103 TVELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 163 QAADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGFGA V+ TD
Sbjct: 223 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGANVKK-------TDDK 275
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T M+T+E DL+ YGLIPEF+GR P++ +L L E LV++L EPKN+L KQY+++F
Sbjct: 276 KTGEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLVKILQEPKNSLIKQYQELF 335
Query: 565 QMNG 568
+++G
Sbjct: 336 KLDG 339
>gi|315924139|ref|ZP_07920365.1| ATP-dependent Clp protease ATP-binding subunit [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622541|gb|EFV02496.1| ATP-dependent Clp protease ATP-binding subunit [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 431
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 228/307 (74%), Gaps = 23/307 (7%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L + PTPKEI LD +VIGQ+ AKK LSVAVYNHY RI +A E+
Sbjct: 58 LYTEVPTPKEIKAALDTYVIGQDEAKKALSVAVYNHYKRI--------NAAET------- 102
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
DDD VE++KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 103 -DDDDVEIQKSNILLIGPTGSGKTLLAQTLARILDVPFAIADATTLTEAGYVGEDVENIL 161
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL +D ++ A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGTV NV
Sbjct: 162 LKLLQAADMDIERAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVANV 221
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHP+ + IQ+DTKDILFICGGAF IE+ I++R + SIGF A +R+ +
Sbjct: 222 PPQGGRKHPQQEFIQLDTKDILFICGGAFDGIEEVIAKRLEKGSIGFDATIRSRVEKED- 280
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
++ME + D++ YGLIPEF+GR PV+ +L L E L+ +LTEPKNAL KQ+
Sbjct: 281 ------DAMMEKIVPHDILKYGLIPEFIGRIPVIATLKHLDEEALINILTEPKNALVKQF 334
Query: 561 RKMFQMN 567
+K+ ++
Sbjct: 335 QKLLRLE 341
>gi|418520578|ref|ZP_13086626.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410703463|gb|EKQ61954.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
Length = 428
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 226/305 (74%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ+RK+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFRKL 342
Query: 564 FQMNG 568
F M G
Sbjct: 343 FDMEG 347
>gi|352085687|ref|ZP_08953278.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodanobacter
sp. 2APBS1]
gi|389798003|ref|ZP_10201031.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
116-2]
gi|351681628|gb|EHA64752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodanobacter
sp. 2APBS1]
gi|388445898|gb|EIM01951.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
116-2]
Length = 430
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 228/305 (74%), Gaps = 23/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P PKEI + LD++V+GQ RAKK L+VAVYNHY RI ES QK
Sbjct: 64 TQLPKPKEIRESLDQYVVGQTRAKKALAVAVYNHYKRI--ESRQK--------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 SDDIELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DTK+ILFICGGAF +EK I +R +++SIGF A VR+ R +
Sbjct: 227 QGGRKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSENTSIGFSAEVRSKERTENL-- 284
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ VE +DL+ +GLIPEFVGR PV+ +L L E LV++LTEPKNA+ KQ+++
Sbjct: 285 ----GKVLADVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAVTKQFKR 340
Query: 563 MFQMN 567
+F+M
Sbjct: 341 LFEME 345
>gi|410092111|ref|ZP_11288651.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
viridiflava UASWS0038]
gi|409760539|gb|EKN45672.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
viridiflava UASWS0038]
Length = 427
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 225/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSIMRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|285017389|ref|YP_003375100.1| ATP-dependent clp protease ATP-binding subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283472607|emb|CBA15112.1| probable atp-dependent clp protease atp-binding subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 428
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/305 (58%), Positives = 228/305 (74%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ+RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVDKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSVERKREV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMNG 568
F+M G
Sbjct: 343 FEMEG 347
>gi|408373742|ref|ZP_11171436.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
hongdengensis A-11-3]
gi|407766446|gb|EKF74889.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
hongdengensis A-11-3]
Length = 427
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/311 (55%), Positives = 230/311 (73%), Gaps = 21/311 (6%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + + P P EI LD++VIGQERAKKVL+VAVYNHY R+ + +S+K
Sbjct: 58 GDSDSERLPKPNEIKTTLDEYVIGQERAKKVLAVAVYNHYKRLRSSTSRK---------- 107
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 108 -----GDEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 162
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 163 NIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTV 222
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT ++LFICGGAF ++K I +R + IGF A V++ +
Sbjct: 223 ASVPPQGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKDDS 282
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
+ + +V VE DL+ YGLIPEF+GR PV+ +L L+E+ LVQ+LTEP+NAL
Sbjct: 283 RNLGETLV------DVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALVQILTEPRNALT 336
Query: 558 KQYRKMFQMNG 568
KQY ++F+M G
Sbjct: 337 KQYARLFEMEG 347
>gi|307151648|ref|YP_003887032.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cyanothece sp.
PCC 7822]
gi|306981876|gb|ADN13757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7822]
Length = 446
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 226/304 (74%), Gaps = 15/304 (4%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P+EI K LD++VIGQ AKKVLSVAVYNHY R+ + S++ G D
Sbjct: 78 QIPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQSKRSGTGSI---------D 128
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D +EL+KSNILLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 129 DPIELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 188
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 189 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQ 248
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQIDT +ILFICGGAFV ++K + +R S+GF P N +
Sbjct: 249 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIQPGDGNAKDKR---- 304
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
T+ L++ +E DL+ +G+IPEFVGR PV+ SL L E L+ +LT+P+NAL KQY+K+
Sbjct: 305 --TADLLKVIEPDDLVKFGMIPEFVGRIPVMASLDPLDEEALIAILTQPRNALVKQYQKL 362
Query: 564 FQMN 567
+M+
Sbjct: 363 LKMD 366
>gi|242088601|ref|XP_002440133.1| hypothetical protein SORBIDRAFT_09g026620 [Sorghum bicolor]
gi|241945418|gb|EES18563.1| hypothetical protein SORBIDRAFT_09g026620 [Sorghum bicolor]
Length = 546
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 220/289 (76%), Gaps = 1/289 (0%)
Query: 285 AKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKT 344
A +VLSVAV+NHY RIYNESS K S + DD +ELEKSNILL+GPTG+GKT
Sbjct: 117 AVQVLSVAVHNHYKRIYNESSNKCSVKSLARGGVTASCDDDIELEKSNILLIGPTGTGKT 176
Query: 345 LLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEV 404
LLAKTLARYVNVPFVIADAT +TQAGY GEDVES++YKLL +D+N+ AA+ GIVYIDEV
Sbjct: 177 LLAKTLARYVNVPFVIADATAITQAGYSGEDVESVIYKLLVAADFNIKAAEHGIVYIDEV 236
Query: 405 DKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFI 464
DK+TKKA+ RDVSGEGVQQALLK+ EGTV++VP K ++ + ++++T++ILFI
Sbjct: 237 DKLTKKADCREDRRDVSGEGVQQALLKIFEGTVISVPRKRSQDNMPQGYVEVNTRNILFI 296
Query: 465 CGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLI 524
CGGAF +EK ++ER Q +GFG P+ +R T A+ S ++TVE+ DLIAYGLI
Sbjct: 297 CGGAFFGLEKIVAERHQ-HPVGFGIPICHELRNCSWTTALQESCSIDTVENDDLIAYGLI 355
Query: 525 PEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMNGQAAFY 573
PEF+GR P+ V L L+E QLVQVL EPKNA+GKQY+K+F+MN ++
Sbjct: 356 PEFIGRLPITVGLNNLSEEQLVQVLREPKNAIGKQYKKLFKMNDVKLYF 404
>gi|254429578|ref|ZP_05043285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alcanivorax
sp. DG881]
gi|196195747|gb|EDX90706.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alcanivorax
sp. DG881]
Length = 426
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/309 (57%), Positives = 227/309 (73%), Gaps = 26/309 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G + P P EI LD++VIGQERAKKVL+VAVYNHY R+ RS G+
Sbjct: 62 GERLPKPNEIKDTLDEYVIGQERAKKVLAVAVYNHYKRL-------RSGGKGR------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGG 499
+G RKHP+ + +Q+DT ++LFICGGAF ++K I ER + IGF A V++ N R G
Sbjct: 226 PQGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRERSEKGGIGFSAEVKSKDNTRNLG 285
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
L+ VE DL+ YGLIPEF+GR PV+ +L L+E L+Q+LTEP+NAL KQ
Sbjct: 286 --------ELLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEEALIQILTEPRNALTKQ 337
Query: 560 YRKMFQMNG 568
Y ++F+M G
Sbjct: 338 YARLFEMEG 346
>gi|443473069|ref|ZP_21063094.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes KF707]
gi|442903632|gb|ELS28923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes KF707]
Length = 426
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQNRSTRGGIGFNAEVRSKELGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LREVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|420140224|ref|ZP_14647995.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CIG1]
gi|403246963|gb|EJY60648.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CIG1]
Length = 427
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 63 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 340 KLFEMEG 346
>gi|117921101|ref|YP_870293.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
ANA-3]
gi|166215205|sp|A0KYL8.1|CLPX_SHESA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|117613433|gb|ABK48887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sp. ANA-3]
Length = 426
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNAL KQY
Sbjct: 280 DKATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYN 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|89092955|ref|ZP_01165907.1| ATP-dependent protease ATP-binding subunit, partial [Neptuniibacter
caesariensis]
gi|89082980|gb|EAR62200.1| ATP-dependent protease ATP-binding subunit [Oceanospirillum sp.
MED92]
Length = 416
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 226/307 (73%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+ PTP E+ LD++VIGQERAKKVL+VAVYNHY R+ + + K
Sbjct: 52 GDHLPTPAELSAALDEYVIGQERAKKVLAVAVYNHYKRLRFQKNDKSG------------ 99
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 100 ----VELGKSNILLIGPTGSGKTLLAQTLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 155
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 156 KLLQKCDYDVEKAQLGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 215
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT +ILFICGGAF +E+ I +R + SSIGF A V++ V+
Sbjct: 216 PQGGRKHPQQEFLQVDTSNILFICGGAFAGLEQIIRDRSEKSSIGFSAVVKSKDEEKTVS 275
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D SL E +E+ DL+ YGLIPEFVGR P++ +L L E LVQ+LTEPKN+L KQY
Sbjct: 276 D-----SLTE-LEAEDLVKYGLIPEFVGRLPMIATLAELDEEALVQILTEPKNSLTKQYA 329
Query: 562 KMFQMNG 568
+F M G
Sbjct: 330 ALFDMEG 336
>gi|326795824|ref|YP_004313644.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
mediterranea MMB-1]
gi|326546588|gb|ADZ91808.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
mediterranea MMB-1]
Length = 427
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 229/306 (74%), Gaps = 22/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP ++ K LD +VIGQERAKKVL+VAVYNHY R+ ++SS+
Sbjct: 66 DELPTPLKLSKSLDDYVIGQERAKKVLAVAVYNHYKRLRHQSSK---------------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 DSPVELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVENIIQK 169
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 170 LLQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 229
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF +E+ IS+R + SSIGF A V++ ++
Sbjct: 230 QGGRKHPQQEFLQVDTSNILFICGGAFAGLERVISDRTEKSSIGFSATVKSKDEGRTFSE 289
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
A+ VE+ DL+ +GLIPEFVGR PV+ +L L E L+ +L+EPKNAL KQY+
Sbjct: 290 AI------HQVETEDLVKFGLIPEFVGRLPVVATLSELDEEALMTILSEPKNALTKQYQH 343
Query: 563 MFQMNG 568
+F + G
Sbjct: 344 LFDLEG 349
>gi|113970829|ref|YP_734622.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
MR-4]
gi|114048054|ref|YP_738604.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
MR-7]
gi|123131263|sp|Q0HTK8.1|CLPX_SHESR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123324884|sp|Q0HHA2.1|CLPX_SHESM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|113885513|gb|ABI39565.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
MR-4]
gi|113889496|gb|ABI43547.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
MR-7]
Length = 426
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNAL KQY
Sbjct: 280 DKATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYN 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|451982760|ref|ZP_21931062.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 18A]
gi|451759537|emb|CCQ83585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 18A]
Length = 426
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|107101234|ref|ZP_01365152.1| hypothetical protein PaerPA_01002267 [Pseudomonas aeruginosa PACS2]
Length = 426
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|424941030|ref|ZP_18356793.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
aeruginosa NCMG1179]
gi|346057476|dbj|GAA17359.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
aeruginosa NCMG1179]
Length = 436
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 72 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 116
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 117 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 174
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 175 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 234
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 235 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 294
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 295 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 348
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 349 KLFEMEG 355
>gi|15596999|ref|NP_250493.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO1]
gi|116049752|ref|YP_791441.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa UCBPP-PA14]
gi|152987449|ref|YP_001348853.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA7]
gi|218892244|ref|YP_002441111.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa LESB58]
gi|254234896|ref|ZP_04928219.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa C3719]
gi|254240195|ref|ZP_04933517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 2192]
gi|296389807|ref|ZP_06879282.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAb1]
gi|313110499|ref|ZP_07796384.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 39016]
gi|355644078|ref|ZP_09053618.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
sp. 2_1_26]
gi|386059305|ref|YP_005975827.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa M18]
gi|386065647|ref|YP_005980951.1| ATP-dependent protease ATP-binding subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|392984725|ref|YP_006483312.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa DK2]
gi|416854316|ref|ZP_11910794.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 138244]
gi|416872416|ref|ZP_11916654.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 152504]
gi|418585583|ref|ZP_13149631.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591337|ref|ZP_13155236.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P2]
gi|419755332|ref|ZP_14281687.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PADK2_CF510]
gi|421154508|ref|ZP_15614013.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 14886]
gi|421161185|ref|ZP_15620151.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 25324]
gi|421168557|ref|ZP_15626633.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 700888]
gi|421175071|ref|ZP_15632768.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CI27]
gi|421181101|ref|ZP_15638619.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa E2]
gi|421516443|ref|ZP_15963129.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO579]
gi|21263483|sp|Q9I2U0.1|CLPX_PSEAE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122258863|sp|Q02KU5.1|CLPX_PSEAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214805|sp|A6V718.1|CLPX_PSEA7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706595|sp|B7VB75.1|CLPX_PSEA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9947785|gb|AAG05191.1|AE004606_5 ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO1]
gi|115584973|gb|ABJ10988.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126166827|gb|EAZ52338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa C3719]
gi|126193573|gb|EAZ57636.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 2192]
gi|150962607|gb|ABR84632.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA7]
gi|218772470|emb|CAW28252.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa LESB58]
gi|310882886|gb|EFQ41480.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 39016]
gi|334844151|gb|EGM22729.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 138244]
gi|334845945|gb|EGM24503.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 152504]
gi|347305611|gb|AEO75725.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa M18]
gi|348034206|dbj|BAK89566.1| ATP-dependent protease ATP-binding subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|354829406|gb|EHF13481.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
sp. 2_1_26]
gi|375044272|gb|EHS36881.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049877|gb|EHS42365.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P2]
gi|384398029|gb|EIE44437.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PADK2_CF510]
gi|392320230|gb|AFM65610.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa DK2]
gi|404350171|gb|EJZ76508.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO579]
gi|404521909|gb|EKA32463.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 14886]
gi|404529366|gb|EKA39412.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 700888]
gi|404533024|gb|EKA42877.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CI27]
gi|404540647|gb|EKA50044.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 25324]
gi|404544329|gb|EKA53518.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa E2]
gi|453047165|gb|EME94880.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA21_ST175]
Length = 426
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|389703170|ref|ZP_10185464.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
HA]
gi|388611573|gb|EIM40673.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
HA]
Length = 436
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 226/303 (74%), Gaps = 19/303 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++VIGQ+ AKK LSVAVYNHY R+ +++ K++ DD
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRLKVQTNGKKA-------------DD 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 SVEIAKSNILLVGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGTV ++P +G
Sbjct: 167 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A VR ++D
Sbjct: 227 GRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVRNKEETKKLSD-- 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPKNAL +QY+ +F
Sbjct: 285 ----LFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPKNALTRQYKHLF 340
Query: 565 QMN 567
M
Sbjct: 341 DME 343
>gi|301631595|ref|XP_002944883.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like
[Xenopus (Silurana) tropicalis]
Length = 421
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 221/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AK+ L+VAVYNHY R+ + D D D
Sbjct: 65 LPTPAEIKANLDNYVIGQEKAKRTLAVAVYNHYKRLRYK---------------DKADKD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIISKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GI+YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVEKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT ++LFICGGAF +EK I R + S IGFGA VR+ +
Sbjct: 230 GRKHPNQDFLQIDTTNVLFICGGAFAGLEKVIENRTEASGIGFGAAVRSKQQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S + + +E DLI +G+IPE VGR PV+ SL L+E+ LVQ+LTEPKNAL KQY K+
Sbjct: 284 -ISEVFQDIEPEDLIKFGIIPELVGRMPVVTSLAELSEDALVQILTEPKNALAKQYSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 SMEG 346
>gi|262374980|ref|ZP_06068214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
lwoffii SH145]
gi|262309993|gb|EEY91122.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
lwoffii SH145]
Length = 436
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 226/303 (74%), Gaps = 19/303 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++VIGQ+ AKK LSVAVYNHY R+ +++ K++ DD
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRLKVQNNGKKA-------------DD 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 SVELSKSNIMLVGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGTV ++P +G
Sbjct: 167 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A VR ++D
Sbjct: 227 GRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVRKKDETKKLSD-- 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPKNAL +QY+ +F
Sbjct: 285 ----LFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPKNALTRQYQHLF 340
Query: 565 QMN 567
M
Sbjct: 341 DME 343
>gi|190573023|ref|YP_001970868.1| ATP-dependent protease ATP-binding subunit ClpX [Stenotrophomonas
maltophilia K279a]
gi|254524793|ref|ZP_05136848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas sp. SKA14]
gi|344206261|ref|YP_004791402.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Stenotrophomonas maltophilia JV3]
gi|424667285|ref|ZP_18104310.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia Ab55555]
gi|229485949|sp|B2FQR3.1|CLPX_STRMK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|190010945|emb|CAQ44554.1| ATP-dependent clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia K279a]
gi|219722384|gb|EED40909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas sp. SKA14]
gi|343777623|gb|AEM50176.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Stenotrophomonas maltophilia JV3]
gi|401069420|gb|EJP77942.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia Ab55555]
gi|456738230|gb|EMF62907.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia EPM1]
Length = 429
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/304 (58%), Positives = 227/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I R D SIGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|53805231|ref|YP_113049.1| ATP-dependent protease ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
gi|61211759|sp|Q60BE7.1|CLPX2_METCA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX 2
gi|53758992|gb|AAU93283.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
Length = 428
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 226/306 (73%), Gaps = 20/306 (6%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI K LD++VIGQE+AK++LSVAVYNHY R+ + + +
Sbjct: 62 ADKLPKPKEIKKVLDEYVIGQEKAKRILSVAVYNHYKRLRAQQTHSKK------------ 109
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+
Sbjct: 110 --NEVELAKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQ 167
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
K+L DY+V A+QGIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 KILQKCDYDVEKAEQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASVP 227
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q++T +ILFICGGAF +EK I R + IGF A V++
Sbjct: 228 PQGGRKHPQQEFLQVNTANILFICGGAFAGLEKIIRSRSEQGGIGFAADVKSK------D 281
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D+ ++ VE+ DLI YGLIPEFVGR PV+ +L L E LV++LTEPKNAL KQYR
Sbjct: 282 DSRNVGEVLADVEAEDLIRYGLIPEFVGRLPVVATLEELDEAALVRILTEPKNALVKQYR 341
Query: 562 KMFQMN 567
++F+M
Sbjct: 342 RLFEME 347
>gi|425472439|ref|ZP_18851280.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9701]
gi|389881466|emb|CCI37972.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9701]
Length = 444
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/319 (55%), Positives = 229/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
S G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 SGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P G + V + L++ + DL+ +G+IPEFVGR PVL +L L E L+ +
Sbjct: 291 QP-----GDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|386717298|ref|YP_006183624.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia D457]
gi|384076860|emb|CCH11445.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia D457]
Length = 429
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/304 (58%), Positives = 227/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I R D SIGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|104781014|ref|YP_607512.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
entomophila L48]
gi|95110001|emb|CAK14706.1| ATP-dependent Clp protease ATP-binding subunit [Pseudomonas
entomophila L48]
Length = 442
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 224/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 77 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 122
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 123 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 180
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 181 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 240
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 241 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEGKKVG 300
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY
Sbjct: 301 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 354
Query: 562 KMFQMN 567
K+F+M
Sbjct: 355 KLFEME 360
>gi|406706128|ref|YP_006756481.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [alpha
proteobacterium HIMB5]
gi|406651904|gb|AFS47304.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [alpha
proteobacterium HIMB5]
Length = 422
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/309 (55%), Positives = 228/309 (73%), Gaps = 23/309 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+PKEIC LD +VIGQ AKKVLSVAV+NHY R+ ES ++
Sbjct: 59 LPSPKEICTVLDDYVIGQAHAKKVLSVAVHNHYKRLNYESKTSKN--------------- 103
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 -VELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 163 QAADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGFGA V+ T
Sbjct: 223 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGADVKN-------TQDK 275
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T M+T+E DL+ YGLIPEF+GR P++ +L L E L+++L EPKN+L KQY+++F
Sbjct: 276 KTGEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLIKILQEPKNSLTKQYQELF 335
Query: 565 QMNGQAAFY 573
+++G +
Sbjct: 336 KLDGAKLIF 344
>gi|422302999|ref|ZP_16390355.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9806]
gi|389792059|emb|CCI12153.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9806]
Length = 444
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/319 (55%), Positives = 229/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
S G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 SGGNP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P G + V + L++ + DL+ +G+IPEFVGR PVL +L L E L+ +
Sbjct: 291 QP-----GDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|333368409|ref|ZP_08460608.1| ATP-dependent Clp protease ATP-binding subunit [Psychrobacter sp.
1501(2011)]
gi|332977274|gb|EGK14065.1| ATP-dependent Clp protease ATP-binding subunit [Psychrobacter sp.
1501(2011)]
Length = 425
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 231/332 (69%), Gaps = 14/332 (4%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
+L+ G + S G + W L K PTPKEI + LD +VIGQE AKK LSVAVYN
Sbjct: 40 DLIEDGDANSVEGEDGEVNTW----LTKKLPTPKEIRQHLDSYVIGQETAKKALSVAVYN 95
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + A + G DD VEL KSNILL+GPTGSGKTLLA+TLAR ++
Sbjct: 96 HYKRL---KVAAKLADDRKQAKI-GADDAMVELSKSNILLIGPTGSGKTLLAQTLARMLD 151
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPF +ADATTLT+AGYVGEDVE+I+ KLL +DY+V A+QGI+Y+DE+DKI+KK E+++
Sbjct: 152 VPFAMADATTLTEAGYVGEDVENIVQKLLQAADYDVERAEQGIIYVDEIDKISKKGENMS 211
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGTV +P G RKHP + IQ+DT +IL I GGAF ++K
Sbjct: 212 ITRDVSGEGVQQALLKLIEGTVAAIPPHGGRKHPNQELIQVDTSNILIIVGGAFSGLDKV 271
Query: 476 ISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLV 535
I +R + S IGF A V++ D + L + VE DLI +GLIPE +GR PV+
Sbjct: 272 IQQRTEKSGIGFNAEVKSK------EDGKQLTELFKQVEPEDLIKFGLIPELIGRLPVIA 325
Query: 536 SLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E+ L+Q+LTEPKNA+ KQY+ +F+M
Sbjct: 326 TLEELDEDALMQILTEPKNAIIKQYQYLFEME 357
>gi|294141767|ref|YP_003557745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
violacea DSS12]
gi|293328236|dbj|BAJ02967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
violacea DSS12]
Length = 418
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 226/307 (73%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQE+AKKVLSVAVYNHY R+ N + +
Sbjct: 56 DKLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNSNPK---------------- 99
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+T AR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 100 -DGVELGKSNILLIGPTGSGKTLLAETFARFLDVPFTMADATTLTEAGYVGEDVENIIQK 158
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 159 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 218
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R Q S IGFGA ++ G +
Sbjct: 219 QGGRKHPQQEFLQVDTSKILFICGGAFSGLEKVIEQRSQTGSGIGFGAQIK------GES 272
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S ++ VE DL+ YGLIPEF+GR PVL +L L E+ LVQ+L+EPKNAL KQ+
Sbjct: 273 DKATISEILMQVEPEDLVKYGLIPEFIGRLPVLSTLAELDEDALVQILSEPKNALTKQFA 332
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 333 ALFEMEG 339
>gi|325922709|ref|ZP_08184449.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
gardneri ATCC 19865]
gi|325546826|gb|EGD17940.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
gardneri ATCC 19865]
Length = 428
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 226/305 (74%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMNG 568
F M G
Sbjct: 343 FDMEG 347
>gi|209964555|ref|YP_002297470.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
centenum SW]
gi|238066659|sp|B6ISY6.1|CLPX_RHOCS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209958021|gb|ACI98657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodospirillum centenum SW]
Length = 421
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 227/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P++IC LD +VIGQE AK+VLSVAV+NHY R+ + G +
Sbjct: 64 PSPRDICAVLDDYVIGQEHAKRVLSVAVHNHYKRLAH-----------------GAKHND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ I+ R + +SIGFGA VRA D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIIAARGKGTSIGFGADVRA-------PDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PV+ +L L EN L+++LT+PKNAL KQY+++F+
Sbjct: 280 TGDILREVEPEDLLKFGLIPEFVGRLPVVATLHDLDENALIEILTKPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|52842085|ref|YP_095884.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378777720|ref|YP_005186158.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629196|gb|AAU27937.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508535|gb|AEW52059.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 426
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/315 (56%), Positives = 231/315 (73%), Gaps = 24/315 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 64 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 105
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 165
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 166 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 225
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ + D
Sbjct: 226 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSS---NDE 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ +LT PKNAL KQ++ +
Sbjct: 283 V--SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 340
Query: 564 FQMNG-QAAFYGKCF 577
F+M G + F G+
Sbjct: 341 FKMEGSELEFRGEAL 355
>gi|58580657|ref|YP_199673.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84622590|ref|YP_449962.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|384418135|ref|YP_005627495.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|81311961|sp|Q5H433.1|CLPX_XANOR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123522986|sp|Q2P6Y9.1|CLPX_XANOM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|58425251|gb|AAW74288.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84366530|dbj|BAE67688.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|353461049|gb|AEQ95328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 428
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 226/305 (74%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMNG 568
F M G
Sbjct: 343 FDMEG 347
>gi|21241839|ref|NP_641421.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citri str. 306]
gi|78046638|ref|YP_362813.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|289664184|ref|ZP_06485765.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289668775|ref|ZP_06489850.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. musacearum NCPPB 4381]
gi|294627914|ref|ZP_06706493.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|294666561|ref|ZP_06731802.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325914925|ref|ZP_08177257.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
vesicatoria ATCC 35937]
gi|325927442|ref|ZP_08188689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
perforans 91-118]
gi|346723959|ref|YP_004850628.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citrumelo F1]
gi|381170419|ref|ZP_09879576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|390990706|ref|ZP_10260987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|418517008|ref|ZP_13083176.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|23813860|sp|Q8PNI4.1|CLPX_XANAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123585731|sp|Q3BWQ0.1|CLPX_XANC5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21107219|gb|AAM35957.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|78035068|emb|CAJ22713.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|292597828|gb|EFF41986.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292603705|gb|EFF47115.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325538818|gb|EGD10482.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
vesicatoria ATCC 35937]
gi|325542192|gb|EGD13687.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
perforans 91-118]
gi|346648706|gb|AEO41330.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citrumelo F1]
gi|372554559|emb|CCF67962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|380689080|emb|CCG36063.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|410706221|gb|EKQ64683.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 428
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 226/305 (74%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMNG 568
F M G
Sbjct: 343 FDMEG 347
>gi|237745592|ref|ZP_04576072.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
HOxBLS]
gi|229376943|gb|EEO27034.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
HOxBLS]
Length = 423
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/311 (56%), Positives = 226/311 (72%), Gaps = 23/311 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G G + PTPKEIC LD++VIGQE+AKK+LSVAVYNHY R+ K G+
Sbjct: 58 GKEKGGELPTPKEICNLLDQYVIGQEQAKKILSVAVYNHYKRL------KYYGGK----- 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE
Sbjct: 107 -----NDDVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVE 161
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 162 NIIQKLLQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTM 221
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
++P +G RKHP D IQ+DT +I+FICGGAF + K I+ R + IGF A V++
Sbjct: 222 ASIPPQGGRKHPNQDFIQVDTSNIMFICGGAFDGLSKIIANRSEKGGIGFSAAVKSPSEK 281
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
G S ++ VE DLI +GLIPE +GR PV+ L LTEN L+++L +PKNAL
Sbjct: 282 AG-------SEMLLNVEPEDLIKFGLIPELIGRLPVVAVLNDLTENALIEILVKPKNALV 334
Query: 558 KQYRKMFQMNG 568
KQY K+ +M G
Sbjct: 335 KQYTKLLEMEG 345
>gi|319787635|ref|YP_004147110.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoxanthomonas suwonensis 11-1]
gi|317466147|gb|ADV27879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudoxanthomonas suwonensis 11-1]
Length = 429
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/305 (58%), Positives = 228/305 (74%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ+RAKK L+VAVYNHY RI ES Q+ ++
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKKTLAVAVYNHYKRI--ESRQR---------------NE 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFI GGAF ++K I +R D+ IGFGA V+++
Sbjct: 229 GRKHPQQEFLQVDTKNILFIVGGAFAGLDKIIQQRSSDAGGIGFGAKVKSSKVKAD---- 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
T L+ VE DLI +GLIPEFVGR PV+ +L L E LV++LTEPKNA+ KQ+RK+
Sbjct: 285 --TGKLLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALVKILTEPKNAITKQFRKL 342
Query: 564 FQMNG 568
F+M G
Sbjct: 343 FEMEG 347
>gi|61211423|sp|Q5ZUE0.2|CLPX_LEGPH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
Length = 424
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/315 (56%), Positives = 231/315 (73%), Gaps = 24/315 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 164 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ + D
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSS---NDE 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ +LT PKNAL KQ++ +
Sbjct: 281 V--SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 338
Query: 564 FQMNG-QAAFYGKCF 577
F+M G + F G+
Sbjct: 339 FKMEGSELEFRGEAL 353
>gi|357463949|ref|XP_003602256.1| LCR [Medicago truncatula]
gi|355491304|gb|AES72507.1| LCR [Medicago truncatula]
Length = 335
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/200 (88%), Positives = 190/200 (95%)
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVESILYKLL +DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA
Sbjct: 22 AGYVGEDVESILYKLLAAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 81
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+VNVPEKGARKHPRGDNIQIDTK+ILFICGGAF+D+EKTISERRQDSSIGFG
Sbjct: 82 LLKMLEGTIVNVPEKGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFG 141
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
APVRA M+AG VT+A + SSL+ TVESSDLIAYGLIPEFVGRFP+LVSL ALTENQL+QV
Sbjct: 142 APVRAKMKAGSVTEASIASSLLGTVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQV 201
Query: 549 LTEPKNALGKQYRKMFQMNG 568
LTEPK+AL KQY+K FQ+NG
Sbjct: 202 LTEPKSALEKQYKKTFQING 221
>gi|333900436|ref|YP_004474309.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
fulva 12-X]
gi|333115701|gb|AEF22215.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
fulva 12-X]
Length = 426
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P P+EI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPREISAILDQYVIGQERAKKILAVAVYNHYKRL-NQREKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLLGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF IEK I R IGF A VR
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGIEKVIQGRSTKGGIGFNAEVRTKD-----V 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ + SL E +E DL+ +GLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY
Sbjct: 280 EKKIGESLRE-IEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNALTKQYG 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|24373361|ref|NP_717404.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
oneidensis MR-1]
gi|46576583|sp|Q8EG18.1|CLPX_SHEON RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|24347624|gb|AAN54848.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
oneidensis MR-1]
Length = 426
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNAL KQY
Sbjct: 280 DKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYN 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|194364615|ref|YP_002027225.1| ATP-dependent protease ATP-binding subunit ClpX [Stenotrophomonas
maltophilia R551-3]
gi|238693450|sp|B4SLN2.1|CLPX_STRM5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|194347419|gb|ACF50542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas maltophilia R551-3]
Length = 429
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/304 (58%), Positives = 226/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I R D SIGFGA V++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSAERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|397664326|ref|YP_006505864.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
gi|395127737|emb|CCD05936.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
Length = 391
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 227/305 (74%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 29 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 70
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 71 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 130
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 131 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 190
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ + D
Sbjct: 191 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSS---NDE 247
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ +LT PKNAL KQ++ +
Sbjct: 248 V--SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 305
Query: 564 FQMNG 568
F+M G
Sbjct: 306 FKMEG 310
>gi|226944448|ref|YP_002799521.1| ATP-dependent protease ATP-binding subunit ClpX [Azotobacter
vinelandii DJ]
gi|226719375|gb|ACO78546.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Azotobacter
vinelandii DJ]
Length = 426
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSPDVGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY
Sbjct: 285 EA------LRDVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALVQILTEPKNALTKQYG 338
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 339 KLFEMEG 345
>gi|407696209|ref|YP_006820997.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alcanivorax
dieselolei B5]
gi|407253547|gb|AFT70654.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alcanivorax
dieselolei B5]
Length = 426
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 180/312 (57%), Positives = 229/312 (73%), Gaps = 23/312 (7%)
Query: 258 GSNLGNK-FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G N G + P P EI LD++VIGQERAKKVLSVAVYNHY R+ +
Sbjct: 57 GDNSGQESLPKPDEIKNTLDEYVIGQERAKKVLSVAVYNHYKRL--------------NS 102
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
T G DD VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDV
Sbjct: 103 TLRGRDD--VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDV 160
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 161 ENIIQKLLQKCDYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 220
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V +VP +G RKHP+ + +Q+DT +ILFICGGAF ++K I +R + IGF A V++
Sbjct: 221 VASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKEG 280
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
V + +V VE DL+ YGLIPEF+GR PV+ +L L+E+ LVQ+LTEP+NAL
Sbjct: 281 DRNVGETLV------GVEPEDLVKYGLIPEFIGRLPVVATLEELSEDALVQILTEPRNAL 334
Query: 557 GKQYRKMFQMNG 568
KQY ++F+M G
Sbjct: 335 TKQYMRLFEMEG 346
>gi|217979045|ref|YP_002363192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocella
silvestris BL2]
gi|254763855|sp|B8EIL3.1|CLPX_METSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|217504421|gb|ACK51830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocella
silvestris BL2]
Length = 421
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/316 (56%), Positives = 231/316 (73%), Gaps = 25/316 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ +AK+VLSVAV+NHY R+ + + +
Sbjct: 63 IPTPKEICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHATKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGFGA V+A D
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKGTSIGFGATVQA-------PDDR 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T + VE DL+ +GLIPEFVGR PV+ +L L E L ++LTEPKNAL KQY+++F
Sbjct: 279 RTGEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLF 338
Query: 565 QM-NGQAAFYGKCFEI 579
+M N + +F + +
Sbjct: 339 EMENTELSFQDEALNV 354
>gi|429216066|ref|ZP_19207225.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M1]
gi|428153719|gb|EKX00273.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M1]
Length = 426
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/307 (57%), Positives = 223/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEIRSILDQYVIGQERAKKTLAVAVYNHYKRL-NQRDRK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQNRSTKGGIGFSAEVRSQEMGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR P++ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LREVEPEDLVKFGLIPEFVGRLPIIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
++F+M G
Sbjct: 339 RLFEMEG 345
>gi|54294747|ref|YP_127162.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila str. Lens]
gi|148359405|ref|YP_001250612.1| ATP-dependent Clp protease ATP binding subunit ClpX [Legionella
pneumophila str. Corby]
gi|296107451|ref|YP_003619151.1| 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
[Legionella pneumophila 2300/99 Alcoy]
gi|397667588|ref|YP_006509125.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
gi|61211413|sp|Q5WVJ1.1|CLPX_LEGPL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214781|sp|A5ID16.1|CLPX_LEGPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|53754579|emb|CAH16063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila str. Lens]
gi|148281178|gb|ABQ55266.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila str. Corby]
gi|295649352|gb|ADG25199.1| 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
[Legionella pneumophila 2300/99 Alcoy]
gi|395130999|emb|CCD09248.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
Length = 424
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 227/305 (74%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 164 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ + D
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSS---NDE 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ +LT PKNAL KQ++ +
Sbjct: 281 V--SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 338
Query: 564 FQMNG 568
F+M G
Sbjct: 339 FKMEG 343
>gi|440753637|ref|ZP_20932839.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa TAIHU98]
gi|440173843|gb|ELP53212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa TAIHU98]
Length = 425
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/319 (54%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 47 SGQNKTTW------EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 100
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 101 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 151
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 152 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 211
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 212 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 271
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P G + V + L++ + DL+ +G+IPEFVGR PVL +L L E L+ +
Sbjct: 272 QP-----GDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAI 326
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 327 LTQPRNALVKQYQKLLKMD 345
>gi|114330231|ref|YP_746453.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosomonas
eutropha C91]
gi|122314710|sp|Q0AJI3.1|CLPX_NITEC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114307245|gb|ABI58488.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosomonas
eutropha C91]
Length = 427
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 179/304 (58%), Positives = 223/304 (73%), Gaps = 19/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EIC+ LD++VIGQE AKK+LSVAVYNHY R+ N S K +AG D
Sbjct: 63 LPTPHEICETLDQYVIGQESAKKILSVAVYNHYKRLRNLS--KVNAGS-----------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DIELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
S+++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP +G
Sbjct: 170 QASNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTAALVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQ+DT +ILFICGGAF I+K I R + S IGFGA V D
Sbjct: 230 GRKHPNQEFIQVDTTNILFICGGAFDGIDKIIRARSEKSGIGFGADVINQ------NDRK 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ ++ +E DLI YGLIPEF+GR PV+ +L L E L+Q+L EPKNAL KQY K+F
Sbjct: 284 ELNKILGDIEPEDLIKYGLIPEFIGRLPVVATLRELNEAALIQILIEPKNALVKQYSKLF 343
Query: 565 QMNG 568
M G
Sbjct: 344 SMEG 347
>gi|307610563|emb|CBX00151.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila 130b]
Length = 424
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 227/305 (74%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 164 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ + D
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSS---NDE 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ +LT PKNAL KQ++ +
Sbjct: 281 V--SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 338
Query: 564 FQMNG 568
F+M G
Sbjct: 339 FKMEG 343
>gi|27380054|ref|NP_771583.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium
japonicum USDA 110]
gi|421598922|ref|ZP_16042240.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
CCGE-LA001]
gi|46576546|sp|Q89KG2.1|CLPX_BRAJA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|27353208|dbj|BAC50208.1| ATP-dependent Clp protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
gi|404268967|gb|EJZ33329.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
CCGE-LA001]
Length = 423
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 225/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGFGA V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|126659495|ref|ZP_01730628.1| ATP-dependent protease ATP-binding subunit [Cyanothece sp. CCY0110]
gi|126619229|gb|EAZ89965.1| ATP-dependent protease ATP-binding subunit [Cyanothece sp. CCY0110]
Length = 391
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/304 (57%), Positives = 220/304 (72%), Gaps = 20/304 (6%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++VIGQ+ AKKVLSVAVYNHY R+ + DD
Sbjct: 28 ELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRL--------------NLVQGKNDD 73
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D +EL+KSNILLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 74 DNIELQKSNILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVENILLRL 133
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP +
Sbjct: 134 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 193
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQIDT +ILFICGGAFV +E+ I +R S+GF P G +
Sbjct: 194 GGRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRP------GEGQSKE 247
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
T+ LM+ VE DL+ +G+IPEFVGR PV+ +L LTE LV +LT P+NAL KQY+K+
Sbjct: 248 KRTADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTRPRNALVKQYQKL 307
Query: 564 FQMN 567
M+
Sbjct: 308 LNMD 311
>gi|425435288|ref|ZP_18815745.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9432]
gi|425452212|ref|ZP_18832030.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 7941]
gi|425458444|ref|ZP_18837932.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9808]
gi|389680217|emb|CCH91097.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9432]
gi|389766109|emb|CCI08184.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 7941]
gi|389822690|emb|CCI29605.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9808]
Length = 444
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/319 (54%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P G + V + L++ + DL+ +G+IPEFVGR PVL +L L E L+ +
Sbjct: 291 QP-----GDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|120599413|ref|YP_963987.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
W3-18-1]
gi|146292591|ref|YP_001183015.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
putrefaciens CN-32]
gi|166215204|sp|A4Y5I3.1|CLPX_SHEPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215206|sp|A1RL88.1|CLPX_SHESW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120559506|gb|ABM25433.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sp. W3-18-1]
gi|145564281|gb|ABP75216.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
putrefaciens CN-32]
Length = 426
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L++PKNAL KQY
Sbjct: 280 DKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYS 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|386313268|ref|YP_006009433.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
putrefaciens 200]
gi|319425893|gb|ADV53967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
putrefaciens 200]
Length = 426
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L++PKNAL KQY
Sbjct: 280 DKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYS 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|408823479|ref|ZP_11208369.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
geniculata N1]
Length = 429
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 177/304 (58%), Positives = 227/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF +++ I R D SIGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDRVIQARSTDVGSIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|365888481|ref|ZP_09427243.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3809]
gi|365335846|emb|CCD99774.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3809]
Length = 380
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++
Sbjct: 19 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKHS----------------- 61
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 62 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 121
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 122 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 181
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 182 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 237
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L EN L ++LTEPKNAL KQY++
Sbjct: 238 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQR 292
Query: 563 MFQMN 567
+F+M
Sbjct: 293 LFEME 297
>gi|410662926|ref|YP_006915297.1| ATP-dependent protease ATP-binding subunit ClpX [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025283|gb|AFU97567.1| ATP-dependent protease ATP-binding subunit ClpX [Simiduia
agarivorans SA1 = DSM 21679]
Length = 432
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 226/306 (73%), Gaps = 19/306 (6%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP+EI + LD++VIGQ+ AKKVL+VAVYNHY R+ + G D
Sbjct: 65 SKLPTPQEISETLDQYVIGQKVAKKVLAVAVYNHYKRL-------------RTSDKGGKD 111
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 112 KEPVELGKSNILLVGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 171
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 172 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 231
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF ++K I +R + IGFGA V++ D
Sbjct: 232 QGGRKHPQQEFLQVDTANILFICGGAFAGLDKVIRDRSEKGGIGFGAEVKSK------DD 285
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ VE DL+ YGLIPEF+GR PV+ +L L ++ L+ +LTEP+NAL KQY K
Sbjct: 286 KRNVGEVLRDVEPEDLVRYGLIPEFIGRLPVIATLEELDKDALITILTEPRNALTKQYSK 345
Query: 563 MFQMNG 568
+F+M G
Sbjct: 346 LFEMEG 351
>gi|425465977|ref|ZP_18845280.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9809]
gi|389831695|emb|CCI25351.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9809]
Length = 444
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 176/319 (55%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
S G +D +EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 SGGNP---------EDGIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P G + V + L++ + DL+ +G+IPEFVGR PVL +L L E L+ +
Sbjct: 291 QP-----GDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|149376711|ref|ZP_01894469.1| ATP-dependent protease ATP-binding subunit [Marinobacter algicola
DG893]
gi|149358950|gb|EDM47416.1| ATP-dependent protease ATP-binding subunit [Marinobacter algicola
DG893]
Length = 427
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 227/307 (73%), Gaps = 25/307 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI-YNESSQKRSAGESSSCTTDGV 321
++ PTP EI L+++VIGQ+RAK VLSVAVYNHY R+ Y E +
Sbjct: 65 DRLPTPAEIRDTLNEYVIGQDRAKVVLSVAVYNHYKRLRYGEGKAE-------------- 110
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 111 ----VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQ 166
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 167 KLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 226
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ++LFICGGAF ++K I ER + SSIGF A V++
Sbjct: 227 PQGGRKHPQQEFLQVDTGNMLFICGGAFAGLDKVIQERSERSSIGFSALVKSP------D 280
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D T +++ VE+ DL+ YGLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY+
Sbjct: 281 DTKNTGDIIKDVETEDLVKYGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQ 340
Query: 562 KMFQMNG 568
K+F M G
Sbjct: 341 KLFDMEG 347
>gi|394987651|ref|ZP_10380490.1| ATP-dependent protease ATP-binding subunit ClpX [Sulfuricella
denitrificans skB26]
gi|393792870|dbj|GAB70129.1| ATP-dependent protease ATP-binding subunit ClpX [Sulfuricella
denitrificans skB26]
Length = 421
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 179/321 (55%), Positives = 228/321 (71%), Gaps = 27/321 (8%)
Query: 248 GSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK 307
G + G S+L P P+EIC+ LD++VI Q +AKK+LSVAVYNHY R+ N S
Sbjct: 50 AQGDQSAKGGASDL----PVPQEICQMLDEYVIDQPKAKKILSVAVYNHYKRLKNSSKT- 104
Query: 308 RSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLT 367
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT
Sbjct: 105 ----------------DEVELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLT 148
Query: 368 QAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 427
+AGYVGEDVE+I+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQ
Sbjct: 149 EAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQ 208
Query: 428 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF 487
ALLK++EGT +VP +G RKHP + +QIDT +ILFICGGAF ++K I R + IGF
Sbjct: 209 ALLKLIEGTTASVPPQGGRKHPNQEFVQIDTTNILFICGGAFSGLDKVIRMRSEKGGIGF 268
Query: 488 GAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQ 547
GA V++ D +++ VE DLI +GLIPEFVGR PV+ +L L E+ L++
Sbjct: 269 GAEVKSK------DDRKEIGAVLRDVEPEDLIKFGLIPEFVGRLPVIATLEDLDEHALMR 322
Query: 548 VLTEPKNALGKQYRKMFQMNG 568
+LTEPKNAL KQY+K+F M G
Sbjct: 323 ILTEPKNALIKQYQKLFAMEG 343
>gi|335042769|ref|ZP_08535796.1| ATP-dependent protease Clp, ATPase subunit [Methylophaga
aminisulfidivorans MP]
gi|333789383|gb|EGL55265.1| ATP-dependent protease Clp, ATPase subunit [Methylophaga
aminisulfidivorans MP]
Length = 423
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 179/311 (57%), Positives = 226/311 (72%), Gaps = 24/311 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP+EI LD +VIGQERAK+ LSVAVYNHY R+ R+A +
Sbjct: 61 SKLPTPREINDALDNYVIGQERAKRYLSVAVYNHYKRL-------RTANK---------- 103
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 104 DNDVELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQK 163
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V A+ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 164 LLQKCDYDVDKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT ILFICGGAF ++K I R Q IGF A +++ V D
Sbjct: 224 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTQKGGIGFSAELKS------VDD 277
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
S + TVE DLI YGLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY++
Sbjct: 278 NKPLSESLRTVEPEDLIQYGLIPEFVGRLPVVATLDELDEKALVQILTEPKNALTKQYQQ 337
Query: 563 MFQM-NGQAAF 572
+F M N + F
Sbjct: 338 LFNMENAELEF 348
>gi|166369014|ref|YP_001661287.1| ATP-dependent protease ATP-binding subunit ClpX [Microcystis
aeruginosa NIES-843]
gi|189044139|sp|B0JL96.1|CLPX_MICAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166091387|dbj|BAG06095.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
Length = 444
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P G + V + L++ + DL+ +G+IPEFVGR P+L +L L E L+ +
Sbjct: 291 QP-----GDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|389795693|ref|ZP_10198807.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
fulvus Jip2]
gi|388430345|gb|EIL87519.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
fulvus Jip2]
Length = 430
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 225/304 (74%), Gaps = 23/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P+EI + LD++V+GQ RAKK L+VAVYNHY RI ES QK
Sbjct: 65 QLPKPREIRESLDQYVVGQSRAKKALAVAVYNHYKRI--ESRQK---------------S 107
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 DDIELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 167
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQ 227
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DTK+ILFICGGAF +EK I +R + + IGF A VR+ R +
Sbjct: 228 GGRKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSETTGIGFSAEVRSKERTENL--- 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DL+ +GLIPEFVGR PV+ +L L E LV++LTEPKNA+ KQ++K+
Sbjct: 285 ---GKVLADVEPEDLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAVTKQFKKL 341
Query: 564 FQMN 567
F+M
Sbjct: 342 FEME 345
>gi|254876857|ref|ZP_05249567.1| ATP-dependent protease ATP-binding subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254842878|gb|EET21292.1| ATP-dependent protease ATP-binding subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 417
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 229/323 (70%), Gaps = 28/323 (8%)
Query: 248 GSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK 307
G+ ++D + K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI + +++
Sbjct: 45 GTSAEDASF------EKLPKPIEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRITSNTTK- 97
Query: 308 RSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLT 367
DDDT EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT
Sbjct: 98 --------------DDDT-ELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLT 142
Query: 368 QAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 427
+AGYVG+DVE+I+ +LL +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQ
Sbjct: 143 EAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQ 202
Query: 428 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF 487
ALLK++EGTV +VP KG RKHP D IQ+DT DILFICGGAF IEK + R SIGF
Sbjct: 203 ALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGF 262
Query: 488 GAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQ 547
A V +++ T LM+ VES DL +GLIPE +GR P++ L L E LV+
Sbjct: 263 NADVIQQ------KNSLDTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVK 316
Query: 548 VLTEPKNALGKQYRKMFQMNGQA 570
+LTEPKNAL KQY K+F+ + A
Sbjct: 317 ILTEPKNALIKQYVKLFKFDDVA 339
>gi|365879288|ref|ZP_09418720.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 375]
gi|365292813|emb|CCD91251.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 375]
Length = 424
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKHS----------------- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L EN L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|188578370|ref|YP_001915299.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|238689531|sp|B2SMI2.1|CLPX_XANOP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|188522822|gb|ACD60767.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 428
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 225/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFG V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGVKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMNG 568
F M G
Sbjct: 343 FDMEG 347
>gi|332529293|ref|ZP_08405255.1| ATP-dependent protease ATP-binding subunit ClpX [Hylemonella
gracilis ATCC 19624]
gi|332041210|gb|EGI77574.1| ATP-dependent protease ATP-binding subunit ClpX [Hylemonella
gracilis ATCC 19624]
Length = 421
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 222/304 (73%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQ+ AK+ L+VAVYNHY R+ ++ + ++ D
Sbjct: 65 LPTPAEIKANLDNYVIGQDAAKRTLAVAVYNHYKRLQHKETARK---------------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELAKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIAKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFIQVDTTNILFICGGAFAGLEKVIERRTESSGIGFGAAVKSKTQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + + VE DLI YGLIPE VGR PV+ +L L+E+ LVQ+LTEPKNAL KQY K+F
Sbjct: 284 -LTEVFKEVEPEDLIKYGLIPELVGRMPVVATLAELSEDALVQILTEPKNALVKQYAKLF 342
Query: 565 QMNG 568
M G
Sbjct: 343 GMEG 346
>gi|54297777|ref|YP_124146.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila str. Paris]
gi|61211415|sp|Q5X452.1|CLPX_LEGPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|53751562|emb|CAH12980.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila str. Paris]
Length = 424
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 225/305 (73%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 164 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ +
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSND---- 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ +LT PKNAL KQ++ +
Sbjct: 280 -EASKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 338
Query: 564 FQMNG 568
F+M G
Sbjct: 339 FKMEG 343
>gi|389774766|ref|ZP_10192885.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
spathiphylli B39]
gi|388438365|gb|EIL95120.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
spathiphylli B39]
Length = 430
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 226/305 (74%), Gaps = 23/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P+EI + LD++V+GQ RAKK L+VAVYNHY RI ES QK
Sbjct: 64 TQLPKPREIRESLDQYVVGQSRAKKALAVAVYNHYKRI--ESRQK--------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 SDDIELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DTK+ILFICGGAF ++K I +R + + IGF A VR+ R +
Sbjct: 227 QGGRKHPQQEFLQVDTKNILFICGGAFSGLDKVIQQRSETTGIGFSAEVRSKERTENL-- 284
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ VE +DL+ +GLIPEFVGR PV+ +L L E LV++LTEPKNA+ KQ+RK
Sbjct: 285 ----GKVLAEVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAVTKQFRK 340
Query: 563 MFQMN 567
+F+M
Sbjct: 341 LFEME 345
>gi|374623545|ref|ZP_09696053.1| ATP-dependent protease ATP-binding subunit ClpX [Ectothiorhodospira
sp. PHS-1]
gi|373942654|gb|EHQ53199.1| ATP-dependent protease ATP-binding subunit ClpX [Ectothiorhodospira
sp. PHS-1]
Length = 424
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 179/311 (57%), Positives = 228/311 (73%), Gaps = 23/311 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G+ G+K P P EI + LD++VIGQERAKK+LSVAVYNHY R+ +
Sbjct: 58 GAVAGSKLPRPHEIKQILDEYVIGQERAKKILSVAVYNHYKRLEARGGK----------- 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 107 ------DEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 160
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 161 NIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTV 220
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT++ILFI GGAF +EK I +R + IGF A V++ R
Sbjct: 221 ASVPPQGGRKHPQQEFLQVDTRNILFIVGGAFAGLEKVIRDRTEKGGIGFSAEVKS--RD 278
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
G + ++ L+ VE DLI +GLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 279 SGQS----STQLLFGVEPEDLIKFGLIPEFVGRLPLVATLEELDEAALVRILTEPKNALT 334
Query: 558 KQYRKMFQMNG 568
KQYRK+F M G
Sbjct: 335 KQYRKLFDMEG 345
>gi|390442512|ref|ZP_10230503.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
sp. T1-4]
gi|389834167|emb|CCI34629.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
sp. T1-4]
Length = 444
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/319 (54%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P G + V + L++ + DL+ +G+IPEFVGR PVL +L L E L+ +
Sbjct: 291 QP-----GDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|119898361|ref|YP_933574.1| ATP-dependent protease ATP-binding subunit ClpX [Azoarcus sp. BH72]
gi|166214754|sp|A1K782.1|CLPX_AZOSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119670774|emb|CAL94687.1| ATP-dependent Clp protease ATP-binding subunit [Azoarcus sp. BH72]
Length = 422
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 232/324 (71%), Gaps = 35/324 (10%)
Query: 248 GSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK 307
GS +G G K PTP EIC+ LD++VIGQ +AK+ LSVAVYNHY R+ + S ++
Sbjct: 53 GSVETEGVKG------KLPTPHEICQILDQYVIGQAQAKRNLSVAVYNHYKRLRHLSGRQ 106
Query: 308 RSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLT 367
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT
Sbjct: 107 ----------------DEVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLT 150
Query: 368 QAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 427
+AGYVGEDVE+I+ KLL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQ
Sbjct: 151 EAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQ 210
Query: 428 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF 487
ALLK++EGT+ ++P +G RKHP D IQ+DT ++LFICGGAF ++K I R + IGF
Sbjct: 211 ALLKLIEGTIASIPPQGGRKHPNQDFIQVDTTNVLFICGGAFDGLDKVIRNRTEKMGIGF 270
Query: 488 GAPVRANMRAGGVTDAVVTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQ 544
GA V++ R G +L ET VE DL+ +GLIPEFVGR PV+ +L L E+
Sbjct: 271 GAEVKS--RQG--------KNLTETFRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEDA 320
Query: 545 LVQVLTEPKNALGKQYRKMFQMNG 568
L+Q+L EPKNAL KQY+K+F M G
Sbjct: 321 LIQILIEPKNALVKQYQKLFSMEG 344
>gi|339494037|ref|YP_004714330.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338801409|gb|AEJ05241.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 426
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQSRSTQGGIGFNAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|386020702|ref|YP_005938726.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 4166]
gi|327480674|gb|AEA83984.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 4166]
Length = 426
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQSRSTQGGIGFNAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|148255922|ref|YP_001240507.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
BTAi1]
gi|166214758|sp|A5EKA7.1|CLPX_BRASB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146408095|gb|ABQ36601.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. BTAi1]
Length = 424
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKHS----------------- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L EN L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|146282419|ref|YP_001172572.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri A1501]
gi|145570624|gb|ABP79730.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
stutzeri A1501]
Length = 441
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 77 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 121
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 122 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 179
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 180 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 239
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 240 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQSRSTQGGIGFNAEVRSKDPGKKIG 299
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 300 EA------LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 353
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 354 KLFELEG 360
>gi|85704730|ref|ZP_01035831.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. 217]
gi|85670548|gb|EAQ25408.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. 217]
Length = 422
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 227/304 (74%), Gaps = 25/304 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P++ICK LD +VIGQ RAKKVLSVAV+NHY R+ N +G+S
Sbjct: 63 IPAPRDICKVLDDYVIGQARAKKVLSVAVHNHYKRLNN-------SGKSD---------- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 -IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 165 QSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VR N DA
Sbjct: 225 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN-------DAR 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ +E DL+ +GLIPEFVGR PV+ +L L E+ LV +LT+PKNAL KQY+++F
Sbjct: 278 GIGEIFTDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNALVKQYQRLF 337
Query: 565 QMNG 568
++ G
Sbjct: 338 ELEG 341
>gi|367473665|ref|ZP_09473213.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 285]
gi|365274061|emb|CCD85681.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 285]
Length = 424
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKHS----------------- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L EN L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|39936025|ref|NP_948301.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris CGA009]
gi|192291680|ref|YP_001992285.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris TIE-1]
gi|61211520|sp|Q6N5L4.1|CLPX_RHOPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229484081|sp|B3Q7P4.1|CLPX_RHOPT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|39649879|emb|CAE28401.1| ATP-dependent Clp protease ATP binding subunit ClpX
[Rhodopseudomonas palustris CGA009]
gi|192285429|gb|ACF01810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris TIE-1]
Length = 424
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 225/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L EN L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|358450533|ref|ZP_09160991.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
manganoxydans MnI7-9]
gi|385331925|ref|YP_005885876.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
adhaerens HP15]
gi|311695075|gb|ADP97948.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
adhaerens HP15]
gi|357225182|gb|EHJ03689.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
manganoxydans MnI7-9]
Length = 427
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/306 (58%), Positives = 226/306 (73%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI LD++VIGQ+RAK VLSVAVYNHY R+ GE
Sbjct: 65 DRLPTPAEIRNTLDEYVIGQDRAKVVLSVAVYNHYKRL--------RYGEGKG------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 --DVELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 LLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT ++LFICGGAF ++K I ER + +SIGF A V + D
Sbjct: 228 QGGRKHPQQEFLQVDTGNMLFICGGAFAGLDKVIRERTEKNSIGFSASVASQ------DD 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
A T +++ VE+ DL+ YGLIPEFVGR PV+ +L L E LVQ+LTEPKN+L KQY+K
Sbjct: 282 AKNTGDVIKDVETEDLVKYGLIPEFVGRLPVVATLNELDEEALVQILTEPKNSLTKQYQK 341
Query: 563 MFQMNG 568
+F M G
Sbjct: 342 LFDMEG 347
>gi|407802231|ref|ZP_11149073.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax sp.
W11-5]
gi|407023906|gb|EKE35651.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax sp.
W11-5]
Length = 435
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/307 (56%), Positives = 223/307 (72%), Gaps = 14/307 (4%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+ P P EI LD +VIGQERAKKVLSVAVYNHY R+ +G+S + G
Sbjct: 63 AQRLPKPHEIKDTLDDYVIGQERAKKVLSVAVYNHYKRL--------RSGDSKTVKGGGK 114
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 115 KGEEIELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 174
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 175 KLLQKCDYDVERAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 234
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT +ILFICGGAF +EK I +R + IGF A V++ +
Sbjct: 235 PQGGRKHPQQEFLQVDTSNILFICGGAFAGLEKIIRDRSEKGGIGFSAEVKSKDK----- 289
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
V + VE DLI +GLIPEF+GR PV+ +L L+E L+Q+LTEP+NAL KQY
Sbjct: 290 -TVNVGQTLADVEPEDLIKFGLIPEFIGRLPVIATLEELSEEALIQILTEPRNALTKQYG 348
Query: 562 KMFQMNG 568
++F M G
Sbjct: 349 RLFDMEG 355
>gi|409394840|ref|ZP_11245987.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Chol1]
gi|409120489|gb|EKM96833.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Chol1]
Length = 426
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTRGGIGFSAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + +VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRSVEPDDLVKFGLIPEFVGRLPVIATLDELDEPALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|127513435|ref|YP_001094632.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella loihica
PV-4]
gi|166215203|sp|A3QFX5.1|CLPX_SHELP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126638730|gb|ABO24373.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
loihica PV-4]
Length = 426
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 223/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP E+ LD +VIGQE+AKKVLSVAVYNHY R+ N + +
Sbjct: 63 DRLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNATPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R + IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRSHVGTGIGFGAEVK------GEA 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S ++ VE DL+ YGLIPEF+GR PVL +L L E L+Q+L+EPKNAL KQ+
Sbjct: 280 DKATISDVLLQVEPEDLVKYGLIPEFIGRLPVLATLAELDEAALIQILSEPKNALTKQFA 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|418293282|ref|ZP_12905195.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379064678|gb|EHY77421.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 426
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|21230440|ref|NP_636357.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769566|ref|YP_244328.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. 8004]
gi|188992774|ref|YP_001904784.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. B100]
gi|384426844|ref|YP_005636201.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. raphani 756C]
gi|23813857|sp|Q8PBY5.1|CLPX_XANCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81304479|sp|Q4URL5.1|CLPX_XANC8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229485950|sp|B0RTF5.1|CLPX_XANCB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21112002|gb|AAM40281.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66574898|gb|AAY50308.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|167734534|emb|CAP52744.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris]
gi|341935944|gb|AEL06083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
campestris pv. raphani 756C]
Length = 428
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 225/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|146341126|ref|YP_001206174.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
ORS 278]
gi|166214759|sp|A4YVM3.1|CLPX_BRASO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146193932|emb|CAL77949.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 278]
Length = 424
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKHS----------------- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L EN L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|443660053|ref|ZP_21132511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa DIANCHI905]
gi|443332569|gb|ELS47169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa DIANCHI905]
Length = 425
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 47 SGQNKTTW------EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 100
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 101 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 151
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 152 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 211
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 212 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 271
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P + + V + L++ + DL+ +G+IPEFVGR PVL +L L E L+ +
Sbjct: 272 QPGDSQ-----ASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAI 326
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 327 LTQPRNALVKQYQKLLKMD 345
>gi|419955541|ref|ZP_14471668.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri TS44]
gi|387967711|gb|EIK52009.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri TS44]
Length = 426
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTRGGIGFSAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + +VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRSVEPDDLVRFGLIPEFVGRLPVIATLDELDEPALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|149201012|ref|ZP_01877987.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. TM1035]
gi|149145345|gb|EDM33371.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. TM1035]
Length = 422
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 226/304 (74%), Gaps = 25/304 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P++ICK LD +VIGQ RAKKVLSVAV+NHY R+ N +G+S
Sbjct: 63 IPAPRDICKVLDDYVIGQARAKKVLSVAVHNHYKRLNN-------SGKSD---------- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 -IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 165 QSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VR N DA
Sbjct: 225 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN-------DAR 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ +E DL+ +GLIPEFVGR PV+ +L L E LV +LT+PKNAL KQY+++F
Sbjct: 278 GVGEIFTDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTQPKNALVKQYQRLF 337
Query: 565 QMNG 568
++ G
Sbjct: 338 ELEG 341
>gi|297538720|ref|YP_003674489.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
versatilis 301]
gi|297258067|gb|ADI29912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
versatilis 301]
Length = 426
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 225/304 (74%), Gaps = 18/304 (5%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EICK LD++VIGQ AKK L+VAVYNHY R+ + + +DG D
Sbjct: 63 LPTPQEICKILDQYVIGQTHAKKNLAVAVYNHYKRLGHNN------------LSDGGQKD 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 EVEISKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLL 170
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V A++GIVYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGTV ++P +G
Sbjct: 171 QKCDYDVEKAKRGIVYIDEVDKISRKSENASITRDVSGEGVQQALLKLIEGTVASIPPQG 230
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + +Q+DT +ILFICGGAF +EK I R + IGFGA V+ G D
Sbjct: 231 GRKHPNQEFVQLDTTNILFICGGAFDGLEKVIRLRSEKGGIGFGAEVK------GKNDIR 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+++ VE DLI +GLIPEF+GR PV+ +L +L E L+ +LTEPKNAL KQY K+F
Sbjct: 285 QVGAVLRDVEPEDLIKFGLIPEFIGRLPVVATLESLDEAALMTILTEPKNALTKQYIKLF 344
Query: 565 QMNG 568
+M G
Sbjct: 345 KMEG 348
>gi|261855008|ref|YP_003262291.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Halothiobacillus neapolitanus c2]
gi|261835477|gb|ACX95244.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halothiobacillus neapolitanus c2]
Length = 434
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 223/305 (73%), Gaps = 11/305 (3%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKE+ + LD++VIGQ+RAK+ L+VAVYNHY R+ S ++ A + D
Sbjct: 60 RLPTPKELVEALDEYVIGQQRAKRALAVAVYNHYKRLNLFGSTRKVAEKDKDS-----DS 114
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+IL KL
Sbjct: 115 EPVELSKSNILLIGPTGSGKTLLAQTLARVLDVPFAIADATTLTEAGYVGEDVENILQKL 174
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQ GIVYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 175 LQRCDYDVEKAQHGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTQASVPPQ 234
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++ I +R + IGF A V++ D
Sbjct: 235 GGRKHPQQEFVQLDTTNILFICGGAFSGLDSIIRQRIEKGGIGFSAEVKSK------DDK 288
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ +ES DL YGLIPEF+GR PV+ +L L E LV++L EPKNAL KQY ++
Sbjct: 289 RAADELLTQIESEDLTRYGLIPEFIGRLPVIATLNELDEAALVKILVEPKNALTKQYMRL 348
Query: 564 FQMNG 568
F+M G
Sbjct: 349 FEMEG 353
>gi|159030461|emb|CAO91363.1| clpX [Microcystis aeruginosa PCC 7806]
Length = 444
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P + + V + L++ + DL+ +G+IPEFVGR PVL +L L E L+ +
Sbjct: 291 QPGDSQ-----ASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|121605847|ref|YP_983176.1| ATP-dependent protease ATP-binding subunit ClpX [Polaromonas
naphthalenivorans CJ2]
gi|166214799|sp|A1VRH7.1|CLPX_POLNA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120594816|gb|ABM38255.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Polaromonas
naphthalenivorans CJ2]
Length = 421
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/320 (56%), Positives = 230/320 (71%), Gaps = 25/320 (7%)
Query: 252 KDGCWGGSNLG---NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
+D GS G + PTP EI LD +VIGQE AK+ L+VAVYNHY R+ ++ S K+
Sbjct: 49 RDELPSGSEAGEARSDLPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKESAKK 108
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+
Sbjct: 109 ---------------DDVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTE 153
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+I+ KLL +Y V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQA
Sbjct: 154 AGYVGEDVENIIQKLLQSCNYEVDRAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQA 213
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLK++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I R + S IGFG
Sbjct: 214 LLKLMEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFG 273
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
A V++ +A +T+A + VE DLI +GLIPE VGR PV+ +L L+E+ LVQ+
Sbjct: 274 AAVKSK-KARSLTEA------FKDVEPEDLIKFGLIPELVGRMPVIATLAELSEDALVQI 326
Query: 549 LTEPKNALGKQYRKMFQMNG 568
LTEPKNA+ KQ+ K+ M G
Sbjct: 327 LTEPKNAVVKQFSKLLAMEG 346
>gi|226939793|ref|YP_002794866.1| ClpX [Laribacter hongkongensis HLHK9]
gi|226714719|gb|ACO73857.1| ClpX [Laribacter hongkongensis HLHK9]
Length = 422
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI + LD++VIGQE+AKK LSVAVYNHY R+ +S D +
Sbjct: 65 LPSPREIREALDQYVIGQEQAKKALSVAVYNHYKRLNAKSD----------------DKN 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVESI+ KLL
Sbjct: 109 EVELSKSNILLIGPTGSGKTLLAQTLARVLDVPFAIADATTLTEAGYVGEDVESIITKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+ AQ+GI+YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV NVP +G
Sbjct: 169 QKCDYDAQKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTVANVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RK+P + IQ+DT +ILFICGGAF +EK I +R + IGFGA V + D
Sbjct: 229 GRKNPNAEFIQVDTTNILFICGGAFDGLEKIIRQRTEKGGIGFGAEVASK------NDQK 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L+ E DLI +GLIPEF+GR PV+ L L E L+ +LTEPKNAL KQYRK+F
Sbjct: 283 AVGELLRDTEPEDLIKFGLIPEFIGRLPVVALLEPLDEEALMTILTEPKNALAKQYRKLF 342
Query: 565 QMNG 568
+M G
Sbjct: 343 EMEG 346
>gi|254455799|ref|ZP_05069228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082801|gb|EDZ60227.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. HTCC7211]
Length = 422
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 227/304 (74%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+PKEIC LD +VIGQ AKKVLSVAV+NHY R+ E+ ++
Sbjct: 59 LPSPKEICSVLDDYVIGQPHAKKVLSVAVHNHYKRLNYENKTSKN--------------- 103
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 -VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
SDYNV AQ+GIVYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 163 QASDYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGFGA V+ T
Sbjct: 223 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGADVKN-------TQDK 275
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T M+T+E DL+ +GLIPEF+GR P++ +L L E L+++L EPKN+L KQY+++F
Sbjct: 276 KTGEWMKTLEPEDLLKFGLIPEFIGRLPMIATLEDLDEKSLIKILQEPKNSLTKQYQELF 335
Query: 565 QMNG 568
+++G
Sbjct: 336 KLDG 339
>gi|431927411|ref|YP_007240445.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
stutzeri RCH2]
gi|431825698|gb|AGA86815.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
stutzeri RCH2]
Length = 426
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|452747928|ref|ZP_21947717.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri NF13]
gi|452008077|gb|EME00321.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri NF13]
Length = 426
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|392421145|ref|YP_006457749.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri CCUG 29243]
gi|390983333|gb|AFM33326.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri CCUG 29243]
Length = 426
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|416405033|ref|ZP_11687844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Crocosphaera
watsonii WH 0003]
gi|357261368|gb|EHJ10639.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Crocosphaera
watsonii WH 0003]
Length = 397
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 223/305 (73%), Gaps = 17/305 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD++VIGQ+ AKKVLSVAVYNHY R+ +K GE D
Sbjct: 30 KELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRLSLVQGKK---GEQ--------D 78
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL+KSNILLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 79 QDNIELQKSNILLMGPTGSGKTLLAQTLAQILEVPFAVADATTLTEAGYVGEDVENILLR 138
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 139 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 198
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +++ I +R S+GF P G +
Sbjct: 199 QGGRKHPYQDCIQIDTSNILFICGGAFVGLDRVIEQRIGKKSMGFVRP------GEGQSK 252
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T+ LM+ VE DL+ +G+IPEFVGR PV+ +L LTE L+ +LT+P+NAL KQY+K
Sbjct: 253 EERTADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLIAILTKPRNALVKQYQK 312
Query: 563 MFQMN 567
+ M+
Sbjct: 313 LLNMD 317
>gi|374705739|ref|ZP_09712609.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
S9]
Length = 427
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/307 (57%), Positives = 224/307 (72%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISAILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -SDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT+ ILFICGGAF +EK I R + IGF A VR+ +
Sbjct: 226 PQGGRKHPQQEFLQVDTRSILFICGGAFSGLEKVIQGRSEKGGIGFNAQVRSKDLGKKIG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 286 ES------LRNVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 339
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 340 KLFELEG 346
>gi|443320139|ref|ZP_21049260.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Gloeocapsa
sp. PCC 73106]
gi|442790135|gb|ELR99747.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Gloeocapsa
sp. PCC 73106]
Length = 446
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 225/305 (73%), Gaps = 15/305 (4%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI LD+ VIGQE AKKVLSVAVYNHY R+ SQK+ S
Sbjct: 77 NQIPKPREIKDFLDEHVIGQETAKKVLSVAVYNHYKRLSICQSQKQDKNPS--------- 127
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D+VEL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 128 EDSVELQKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLR 187
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP
Sbjct: 188 LLQVADLDVEEAQRGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKMLEGTIANVPP 247
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV ++K I +R SIGF P + D
Sbjct: 248 QGGRKHPYQDCIQIDTSNILFICGGAFVGLDKIIEQRIGRKSIGFIHPGENPSKEKRALD 307
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ ++E DL+ +G+IPEFVGR PV+ SL +L E L+ +LT+P+NAL KQY+K
Sbjct: 308 ------LLTSLEPDDLVKFGMIPEFVGRIPVMASLESLDEEALIAILTKPRNALVKQYQK 361
Query: 563 MFQMN 567
+ QM+
Sbjct: 362 LLQMD 366
>gi|163751870|ref|ZP_02159084.1| ATP-dependent protease ATP-binding subunit [Shewanella benthica
KT99]
gi|161328220|gb|EDP99384.1| ATP-dependent protease ATP-binding subunit [Shewanella benthica
KT99]
Length = 425
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 224/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ++AKKVLSVAVYNHY R+ N + +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNSNHK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+T AR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETFARFLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R + S IGFGA ++ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFSGLEKVIEQRSHKGSGIGFGAQIK------GED 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S ++ VE DLI YGLIPEFVGR PVL +L L E LVQ+L+EPKNAL KQ+
Sbjct: 280 DKATISEILMQVEPEDLIKYGLIPEFVGRLPVLSTLTELDEEALVQILSEPKNALTKQFA 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|119774362|ref|YP_927102.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
amazonensis SB2B]
gi|166215200|sp|A1S4X6.1|CLPX_SHEAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119766862|gb|ABL99432.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
amazonensis SB2B]
Length = 425
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 224/306 (73%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQE+AKKVLSVAVYNHY R+ R+AG
Sbjct: 62 DKLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRL-------RNAGPK--------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -DGVELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 165 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ ++
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVKGKEEKESMS 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D ++ VE DL+ YGLIPEF+GR PV+ +L L E+ L+Q+L+EPKNAL KQY
Sbjct: 285 D------ILSQVEPEDLVKYGLIPEFIGRLPVVATLAELDEDALIQILSEPKNALTKQYA 338
Query: 562 KMFQMN 567
+F+M
Sbjct: 339 ALFEME 344
>gi|425439907|ref|ZP_18820219.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9717]
gi|389719746|emb|CCH96447.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9717]
Length = 444
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/319 (54%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P + + V + L++ + DL+ +G+IPEFVGR P+L +L L E L+ +
Sbjct: 291 QPGDSQ-----ASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|421618979|ref|ZP_16059945.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri KOS6]
gi|409779071|gb|EKN58747.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri KOS6]
Length = 426
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTRGGIGFNAEVRSKDPGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 EA------LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|336311089|ref|ZP_08566056.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
HN-41]
gi|335865305|gb|EGM70331.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
HN-41]
Length = 426
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/307 (57%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L++PKNAL KQY
Sbjct: 280 EKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYS 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|425453824|ref|ZP_18833577.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9807]
gi|389800129|emb|CCI20439.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9807]
Length = 444
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/319 (54%), Positives = 227/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P + V + L++ + DL+ +G+IPEFVGR P+L +L L E L+ +
Sbjct: 291 QPGDSQANKDK-----VAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|88810608|ref|ZP_01125865.1| ATP-dependent protease ATP-binding subunit [Nitrococcus mobilis
Nb-231]
gi|88792238|gb|EAR23348.1| ATP-dependent protease ATP-binding subunit [Nitrococcus mobilis
Nb-231]
Length = 425
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/309 (57%), Positives = 225/309 (72%), Gaps = 23/309 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P P EI LD +VIGQE+AKKVLSVAVYNHY R+ E+S +S
Sbjct: 63 GSKLPKPHEIKTVLDDYVIGQEQAKKVLSVAVYNHYKRM--EASHSKS------------ 108
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+
Sbjct: 109 ---EVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQQGIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 KLLQKCDYDVEKAQQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTIASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q++T +ILFICGGAF +EK I +R + IGF A ++ + +
Sbjct: 226 PQGGRKHPQQEFLQVNTGNILFICGGAFAGLEKIIQQRSERGGIGFSAEIKGREQRKSIG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D+ + VE DLI YGLIPEFVGR PV+ +L L E L+++L EPKNAL KQY+
Sbjct: 286 DS------LRDVEPEDLIRYGLIPEFVGRMPVVATLTELDEEALMRILIEPKNALVKQYQ 339
Query: 562 KMFQMNGQA 570
K+F M G A
Sbjct: 340 KLFTMEGAA 348
>gi|406942780|gb|EKD74935.1| hypothetical protein ACD_44C00289G0001 [uncultured bacterium]
Length = 423
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 223/306 (72%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P+EI K LD +VIGQ AKK+LSVAVYNHY R+ ++S +
Sbjct: 63 QRLPHPREIAKTLDDYVIGQTLAKKILSVAVYNHYKRLQHDSKK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DDIELNKSNILLIGPTGSGKTLLAETLARILNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVKKAQTGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
G RKHP+ + +Q+DT +ILFICGGAF +EK + +R + SSIGF A V + + +
Sbjct: 226 HGGRKHPQQEFLQVDTSNILFICGGAFSGLEKIVKDRTEKSSIGFSAQVHSKHNKKQIGE 285
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ ++E DLI YGLIPEFVGR PV+ +L L N L+QVL +PKN+L KQY K
Sbjct: 286 ------VLRSLEPEDLIKYGLIPEFVGRLPVVATLDELDLNSLIQVLIQPKNSLIKQYTK 339
Query: 563 MFQMNG 568
+F+M+G
Sbjct: 340 LFKMDG 345
>gi|384218432|ref|YP_005609598.1| ATP-dependent Clp protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
gi|354957331|dbj|BAL10010.1| ATP-dependent Clp protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
Length = 423
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|222632348|gb|EEE64480.1| hypothetical protein OsJ_19330 [Oryza sativa Japonica Group]
Length = 504
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/314 (56%), Positives = 225/314 (71%), Gaps = 12/314 (3%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKV----------LSVAVYNHYMRIYNESSQKRSAGES 313
+FPTPKEI +GLD+FV+GQ++AKKV L VAV+ I N S+ +
Sbjct: 45 RFPTPKEIRRGLDEFVVGQDKAKKVNETSLLVGVVLCVAVHITPRGIQNSSNCSMKSSAC 104
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ G DD +ELEKSNILL+GPTGSGKTLLAKTLAR+ +VPFVIADAT +TQAGY G
Sbjct: 105 GDVSMSG--DDDIELEKSNILLIGPTGSGKTLLAKTLARFADVPFVIADATAITQAGYSG 162
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVESI+ LL + +NV A ++GIVYIDEVDK+ KK E RDVSGEGVQ ALLK+
Sbjct: 163 EDVESIICNLLAAAKFNVEATERGIVYIDEVDKLIKKVECNEDRRDVSGEGVQHALLKIF 222
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV+NVP K + ++++TK+ILFICGG+F +EK +SER ++ +GFG P
Sbjct: 223 EGTVINVPRKRNQDSISDGYVEVNTKNILFICGGSFSGLEKIVSERHRNCHMGFGLPTSG 282
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
++R G T+A+ S +E +ES DLIAYGLIPEF+GR P+ V L L+E QLVQVL EPK
Sbjct: 283 DLRNCGWTNAIGESCCVEAIESDDLIAYGLIPEFIGRLPITVGLNDLSEAQLVQVLMEPK 342
Query: 554 NALGKQYRKMFQMN 567
NA+GKQY+K+F+MN
Sbjct: 343 NAIGKQYKKLFKMN 356
>gi|304311291|ref|YP_003810889.1| ATP-dependent Clp protease ATP-binding subunit [gamma
proteobacterium HdN1]
gi|301797024|emb|CBL45237.1| ATP-dependent Clp protease ATP-binding subunit [gamma
proteobacterium HdN1]
Length = 434
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 226/310 (72%), Gaps = 16/310 (5%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
N ++ P+PKEI LD +VIGQ+RAKK+L+VAVYNHY RI +G + S
Sbjct: 60 ADNKSDRLPSPKEIKTILDDYVIGQDRAKKILAVAVYNHYKRI--------RSGNAKSAK 111
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
G D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 112 GRGEGD--IELSKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 169
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 170 NIIQKLLQKCDYDVEKAQVGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTV 229
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I R S IGF A V++
Sbjct: 230 ASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKVIQNRSTKSGIGFVASVKSK--- 286
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
D + ++ VE DL+ +GLIPEFVGR P++ +L L E LV++LTEP+N+L
Sbjct: 287 ---EDNINVGDTLKEVEPEDLVKFGLIPEFVGRLPIIATLEELDEAALVRILTEPRNSLT 343
Query: 558 KQYRKMFQMN 567
KQY+K+F+M
Sbjct: 344 KQYQKLFEME 353
>gi|302390302|ref|YP_003826123.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermosediminibacter oceani DSM 16646]
gi|302200930|gb|ADL08500.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermosediminibacter oceani DSM 16646]
Length = 421
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 235/330 (71%), Gaps = 29/330 (8%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
S+D SN+ P P EI + LD++VIGQE+AKK+LSVAVYNHY RI
Sbjct: 51 SEDAEMDFSNI----PKPSEIKEILDQYVIGQEKAKKILSVAVYNHYKRI---------- 96
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
+SS TD V EL+KSNI+++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AG
Sbjct: 97 --NSSVKTDDV-----ELQKSNIIMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAG 149
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+IL KL+ +DY+V A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALL
Sbjct: 150 YVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALL 209
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K+LEGT+ +VP +G RKHP + IQIDT +ILFICGGAF IEK I+ R SIGFGA
Sbjct: 210 KILEGTIASVPPQGGRKHPHQEFIQIDTTNILFICGGAFEGIEKIIANRIGKKSIGFGAE 269
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
+R+ L+ + DL+ +G+IPEFVGR P++V+L AL E L+++L
Sbjct: 270 IRSKEEKN-------VGELLSQIMPEDLLKFGMIPEFVGRVPIIVTLDALDEQALIRILK 322
Query: 551 EPKNALGKQYRKMFQM-NGQAAFYGKCFEI 579
EPKNAL KQY+K+F+M N Q F + ++
Sbjct: 323 EPKNALVKQYQKLFEMDNVQLEFTDEALQV 352
>gi|386815715|ref|ZP_10102933.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiothrix
nivea DSM 5205]
gi|386420291|gb|EIJ34126.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiothrix
nivea DSM 5205]
Length = 426
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/313 (56%), Positives = 226/313 (72%), Gaps = 27/313 (8%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
GS+ + PTP E+ LD++VIGQE AK+VLSVAVYNHY R+Y + +
Sbjct: 59 GSDEQSSLPTPHELKANLDEYVIGQELAKRVLSVAVYNHYKRLYKKGGK----------- 107
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 108 ------DDVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 161
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL DY+V AQ GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 162 NIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTI 221
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NM 495
+VP +G RKHP+ + +Q+DT++ILFI GGAF +++ I R + SIGF A V+A
Sbjct: 222 ASVPPQGGRKHPQQEFLQVDTRNILFIVGGAFAGMDRVIRRRTEKGSIGFSAKVKAPDES 281
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
R+ G ++ +E+ DL+ YGLIPEFVGR PV+ +L L E LVQ+LTEP+NA
Sbjct: 282 RSFG--------EVIRDIEAEDLVHYGLIPEFVGRLPVVATLEELDEEALVQILTEPRNA 333
Query: 556 LGKQYRKMFQMNG 568
L KQY K+F M G
Sbjct: 334 LTKQYAKLFDMEG 346
>gi|260432981|ref|ZP_05786952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416809|gb|EEX10068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
lacuscaerulensis ITI-1157]
Length = 422
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 227/302 (75%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ RAK+VLSVAV+NHY R+ + + AG
Sbjct: 64 PTPKDICEVLDDYVIGQARAKRVLSVAVHNHYKRL----NHAQKAGSD------------ 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VR N G
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDNDERG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 281 VGEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|126462594|ref|YP_001043708.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17029]
gi|221639634|ref|YP_002525896.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides KD131]
gi|332558620|ref|ZP_08412942.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides WS8N]
gi|429209760|ref|ZP_19200987.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
sp. AKP1]
gi|166215194|sp|A3PKS0.1|CLPX_RHOS1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763860|sp|B9KJU8.1|CLPX_RHOSK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126104258|gb|ABN76936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17029]
gi|221160415|gb|ACM01395.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodobacter
sphaeroides KD131]
gi|332276332|gb|EGJ21647.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides WS8N]
gi|428187303|gb|EKX55888.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
sp. AKP1]
Length = 421
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/303 (58%), Positives = 227/303 (74%), Gaps = 25/303 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ AK+VLSVAV+NHY R+ N SS+ TD
Sbjct: 64 PTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRL-NHSSK-----------TD------ 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I++R + S IGFGA V+ DA
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD-------PDARG 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L + +E DL+ +GLIPEFVGR PV+ +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 279 VGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALVKQYQRLFE 338
Query: 566 MNG 568
+ G
Sbjct: 339 IEG 341
>gi|406902847|gb|EKD45108.1| hypothetical protein ACD_70C00070G0005 [uncultured bacterium]
Length = 421
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/301 (57%), Positives = 225/301 (74%), Gaps = 24/301 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K +PKE+ LD++VIGQE AKK+LSVAVYNHY R+ N +S +
Sbjct: 63 KLLSPKELHMQLDQYVIGQEEAKKILSVAVYNHYKRLRNHAS-----------------N 105
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 DDVELSKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATTLTEAGYVGEDVENIVQKL 165
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +Y+V A+ GI+YIDE+DKI++K++S +++RDVSGEGVQQALLK++EGTV +P +
Sbjct: 166 LQKCNYDVKKAETGIIYIDEIDKISRKSDSPSLTRDVSGEGVQQALLKLIEGTVAAIPPQ 225
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF D++K + +R +S IGF A ++ + GV DA
Sbjct: 226 GGRKHPQQEYLQVDTTNILFICGGAFADLDKIVQQRTDESGIGFAATMK---KKSGVPDA 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++ VE+ DLI YGLIPEFVGR P++ L L E+ L+ VLTEPKNAL KQYRK+
Sbjct: 283 ----GIVKKVETQDLIKYGLIPEFVGRLPIISVLDELDEDALLTVLTEPKNALTKQYRKL 338
Query: 564 F 564
F
Sbjct: 339 F 339
>gi|182679146|ref|YP_001833292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Beijerinckia
indica subsp. indica ATCC 9039]
gi|238691227|sp|B2IGP2.1|CLPX_BEII9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|182635029|gb|ACB95803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 421
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/316 (55%), Positives = 229/316 (72%), Gaps = 25/316 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EICK LD +VIGQ +AK+VLSVAV+NHY R+ + + +
Sbjct: 63 IPTPREICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHATKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V+A D
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKTTSIGFAASVQA-------PDDR 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T + VE DL+ +GLIPEFVGR PV+ +L L E L ++LTEPKNAL KQY+++F
Sbjct: 279 RTGEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLF 338
Query: 565 QM-NGQAAFYGKCFEI 579
+M N + F + +
Sbjct: 339 EMENTELTFQDEALNV 354
>gi|67923460|ref|ZP_00516937.1| ClpX, ATPase regulatory subunit [Crocosphaera watsonii WH 8501]
gi|67854695|gb|EAM49977.1| ClpX, ATPase regulatory subunit [Crocosphaera watsonii WH 8501]
Length = 444
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 223/305 (73%), Gaps = 17/305 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD++VIGQ+ AKKVLSVAVYNHY R+ +K GE D
Sbjct: 77 KELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRLSLVQGKK---GEQ--------D 125
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL+KSNILLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 126 QDNIELQKSNILLMGPTGSGKTLLAQTLAQILEVPFAVADATTLTEAGYVGEDVENILLR 185
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 186 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 245
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +++ I +R S+GF P G +
Sbjct: 246 QGGRKHPYQDCIQIDTSNILFICGGAFVGLDRVIEQRIGKKSMGFVRP------GEGQSK 299
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T+ LM+ VE DL+ +G+IPEFVGR PV+ +L LTE L+ +LT+P+NAL KQY+K
Sbjct: 300 EERTADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLIAILTKPRNALVKQYQK 359
Query: 563 MFQMN 567
+ M+
Sbjct: 360 LLNMD 364
>gi|409993261|ref|ZP_11276409.1| ATP-dependent protease ATP-binding subunit ClpX [Arthrospira
platensis str. Paraca]
gi|291568934|dbj|BAI91206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis NIES-39]
gi|409935885|gb|EKN77401.1| ATP-dependent protease ATP-binding subunit ClpX [Arthrospira
platensis str. Paraca]
Length = 456
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 226/304 (74%), Gaps = 4/304 (1%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI + LD+ VIGQ KKVLSVAVYNHY R+ ++ + G T G D
Sbjct: 77 ELPKPVEIKQYLDQHVIGQNNTKKVLSVAVYNHYKRLSVDAENISNQGFDE---TQGYSD 133
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL+KSNILLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+IL +L
Sbjct: 134 EQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENILLRL 193
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D+++ AAQQGIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTVVNVP +
Sbjct: 194 LQVADFDIEAAQQGIVYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVNVPPQ 253
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQIDT ILFICGGAFV ++K + +R S+GF P GV +
Sbjct: 254 GGRKHPYQDFIQIDTSKILFICGGAFVGLDKVVEQRMGKKSLGFIQP-GVKPEEEGVKTS 312
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V ++ +++ VE DL+ +GLIPEF+GR PVL + L E LV++LTEP NAL KQY+++
Sbjct: 313 VDSTEVLQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNALVKQYKQL 372
Query: 564 FQMN 567
+M+
Sbjct: 373 LKMD 376
>gi|148652117|ref|YP_001279210.1| ATP-dependent protease ATP-binding subunit ClpX [Psychrobacter sp.
PRwf-1]
gi|172048458|sp|A5WC69.1|CLPX_PSYWF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148571201|gb|ABQ93260.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Psychrobacter
sp. PRwf-1]
Length = 425
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/320 (55%), Positives = 225/320 (70%), Gaps = 17/320 (5%)
Query: 251 SKDG---CWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK 307
S+DG W L K PTPKEI + LD +VIGQE AKK LSVAVYNHY R+ +
Sbjct: 52 SEDGEVNTW----LTKKLPTPKEIREHLDGYVIGQETAKKALSVAVYNHYKRLKVAAK-- 105
Query: 308 RSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLT 367
E G DD VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT
Sbjct: 106 --LAEDKKQAKLGADDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFAMADATTLT 163
Query: 368 QAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 427
+AGYVGEDVE+I+ KLL +DY+V A+QGI+Y+DE+DKI+KK E+++I+RDVSGEGVQQ
Sbjct: 164 EAGYVGEDVENIVQKLLQAADYDVEKAEQGIIYVDEIDKISKKGENMSITRDVSGEGVQQ 223
Query: 428 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF 487
ALLK++EGTV +P G RKHP + IQ+DT +IL I GGAF ++K I +R + + IGF
Sbjct: 224 ALLKLIEGTVAAIPPHGGRKHPNQELIQVDTSNILIIVGGAFSGLDKVIQQRTEKTGIGF 283
Query: 488 GAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQ 547
A V++ D S L + VE DLI +GLIPE +GR PV+ +L L E L+Q
Sbjct: 284 NAEVKSK------DDGKQLSELFKQVEPEDLIKFGLIPELIGRLPVIATLEELDEEALMQ 337
Query: 548 VLTEPKNALGKQYRKMFQMN 567
+LTEPKNA+ KQY+ +F+M
Sbjct: 338 ILTEPKNAIVKQYQYLFEME 357
>gi|383771491|ref|YP_005450556.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. S23321]
gi|381359614|dbj|BAL76444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. S23321]
Length = 423
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|365895291|ref|ZP_09433412.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3843]
gi|365424010|emb|CCE05954.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3843]
Length = 424
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQTKHS----------------- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L EN L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|429744136|ref|ZP_19277646.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria sp.
oral taxon 020 str. F0370]
gi|429163566|gb|EKY05776.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria sp.
oral taxon 020 str. F0370]
Length = 416
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/321 (54%), Positives = 225/321 (70%), Gaps = 26/321 (8%)
Query: 248 GSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK 307
G+G DG G ++ K PTP EI LD VIGQE+AKK L+VAVYNHY R+ + +
Sbjct: 46 GAGKADGSDGTAD---KLPTPAEIVANLDDHVIGQEQAKKALAVAVYNHYKRLRHPQAGG 102
Query: 308 RSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLT 367
+ VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT
Sbjct: 103 K-----------------VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLT 145
Query: 368 QAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 427
+AGYVGEDVE I+ KLL D+NV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQ
Sbjct: 146 EAGYVGEDVEQIITKLLGKCDFNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQ 205
Query: 428 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF 487
ALLK++EGTV +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R + IGF
Sbjct: 206 ALLKLIEGTVASVPPQGGRKHPNQDFVQVDTTNILFICGGAFAGLEKVIRQRTEKGGIGF 265
Query: 488 GAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQ 547
GA V + +T+ L E VE DLI +GLIPE +GR PV+ +L L E+ L+
Sbjct: 266 GASVHSKDENAAITE------LFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALIN 319
Query: 548 VLTEPKNALGKQYRKMFQMNG 568
+LTEPKNAL KQY+ + M G
Sbjct: 320 ILTEPKNALVKQYQALLAMEG 340
>gi|340028582|ref|ZP_08664645.1| ATP-dependent protease ATP-binding subunit ClpX [Paracoccus sp.
TRP]
Length = 421
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/307 (55%), Positives = 229/307 (74%), Gaps = 25/307 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+ PTP+EIC LD +VIGQE AK+VLSVAV+NHY R+ N SS+
Sbjct: 60 GDGVPTPREICNVLDDYVIGQEHAKRVLSVAVHNHYKRL-NHSSK--------------- 103
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ +EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 104 --NDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIIL 161
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 162 KLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP 221
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT +ILFICGGAF +++ I++R + +++GFGA V+ N G
Sbjct: 222 PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGASVKENDDKG--- 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
L + +E DL+ +GLIPEFVGR PV+ +L L E L+ +LT+PKNAL KQY+
Sbjct: 279 ----VGELFKQLEPEDLLKFGLIPEFVGRLPVIATLGDLDEQALITILTQPKNALVKQYQ 334
Query: 562 KMFQMNG 568
++F++ G
Sbjct: 335 RLFELEG 341
>gi|254492062|ref|ZP_05105238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylophaga
thiooxidans DMS010]
gi|224462726|gb|EEF78999.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylophaga
thiooxydans DMS010]
Length = 423
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/306 (57%), Positives = 222/306 (72%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP+EI + LD +VIGQE+AK+ LSVAVYNHY R+ + G
Sbjct: 61 SKLPTPREINEALDNYVIGQEKAKRYLSVAVYNHYKRLRS-----------------GHK 103
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 104 DDGVELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQK 163
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V A+ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 164 LLQKCDYDVDKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT ILFICGGAF ++K I R IGF A V++ + +
Sbjct: 224 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTHKGGIGFSADVKS------LDE 277
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
S + TVE DLI YGLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY++
Sbjct: 278 QRPLSESLRTVEPEDLIQYGLIPEFVGRLPVVATLDELDEAALVQILTEPKNALTKQYQR 337
Query: 563 MFQMNG 568
+F M G
Sbjct: 338 LFDMEG 343
>gi|425445343|ref|ZP_18825375.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9443]
gi|389734666|emb|CCI01692.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9443]
Length = 444
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/319 (54%), Positives = 228/319 (71%), Gaps = 20/319 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 GGGNP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
P + + V + L++ + DL+ +G+IPEFVGR P+L +L L E L+ +
Sbjct: 291 QPGDSQ-----ASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAI 345
Query: 549 LTEPKNALGKQYRKMFQMN 567
LT+P+NAL KQY+K+ +M+
Sbjct: 346 LTQPRNALVKQYQKLLKMD 364
>gi|187931472|ref|YP_001891456.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712381|gb|ACD30678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 417
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNADVTQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|163793183|ref|ZP_02187159.1| ATP-dependent protease Clp [alpha proteobacterium BAL199]
gi|159181829|gb|EDP66341.1| ATP-dependent protease Clp [alpha proteobacterium BAL199]
Length = 424
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 175/302 (57%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP +IC+ LD +VIGQ +AK++LSVAV+NHY R+ + G ++
Sbjct: 67 PTPGDICQVLDDYVIGQLKAKRILSVAVHNHYKRLAH-----------------GQKNND 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + SSIGFGA VRA D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISNRSRGSSIGFGADVRA-------PDDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 283 TGEVLREVEPEDLLKFGLIPEFVGRLPVLATLEDLEEDALVDILTKPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|126173839|ref|YP_001049988.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS155]
gi|160874745|ref|YP_001554061.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS195]
gi|217973909|ref|YP_002358660.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS223]
gi|373948995|ref|ZP_09608956.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS183]
gi|378707998|ref|YP_005272892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
baltica OS678]
gi|386325166|ref|YP_006021283.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica BA175]
gi|386340599|ref|YP_006036965.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS117]
gi|418023626|ref|ZP_12662611.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS625]
gi|166215201|sp|A3D306.1|CLPX_SHEB5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044150|sp|A9KWH8.1|CLPX_SHEB9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763862|sp|B8E5E8.1|CLPX_SHEB2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|125997044|gb|ABN61119.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS155]
gi|160860267|gb|ABX48801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS195]
gi|217499044|gb|ACK47237.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS223]
gi|315266987|gb|ADT93840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS678]
gi|333819311|gb|AEG11977.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica BA175]
gi|334863000|gb|AEH13471.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS117]
gi|353537509|gb|EHC07066.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS625]
gi|373885595|gb|EHQ14487.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS183]
Length = 426
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNASPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGIELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L++PKNAL KQY
Sbjct: 280 EKATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYS 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|319789634|ref|YP_004151267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovibrio
ammonificans HB-1]
gi|317114136|gb|ADU96626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovibrio
ammonificans HB-1]
Length = 410
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 223/306 (72%), Gaps = 25/306 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTPKEI + LD++VIGQE AKKVLSVAVYNHY RI + S VD
Sbjct: 59 DKLPTPKEIKEFLDQYVIGQEEAKKVLSVAVYNHYKRIMSGGS---------------VD 103
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VELEKSNILL+GPTGSGKTLLA++LA+ ++VPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 104 D--VELEKSNILLIGPTGSGKTLLARSLAKLLDVPFAIADATTLTEAGYVGEDVENILLR 161
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
L+ +DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV NVP
Sbjct: 162 LIQAADYDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPP 221
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP IQIDT +ILFICGGAFV +E I+ R ++GF A V
Sbjct: 222 QGGRKHPHQQYIQIDTSNILFICGGAFVGLEDIIARRIGKGAMGFTADVDKK-------- 273
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ L++ VE DL+ +GLIPE +GR PV+ +L L E LV+VLTEPKNAL KQY+K
Sbjct: 274 KMERDELLKYVEPDDLVKFGLIPELIGRLPVIATLKELKEEDLVRVLTEPKNALVKQYKK 333
Query: 563 MFQMNG 568
+ +M G
Sbjct: 334 LLEMEG 339
>gi|86605508|ref|YP_474271.1| ATP-dependent protease ATP-binding subunit ClpX [Synechococcus sp.
JA-3-3Ab]
gi|123507236|sp|Q2JW64.1|CLPX_SYNJA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86554050|gb|ABC99008.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synechococcus
sp. JA-3-3Ab]
Length = 448
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 227/307 (73%), Gaps = 17/307 (5%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P+EI + LD++VIGQE+AKKVLSVAVYNHY KR A +++ + +
Sbjct: 78 QLPKPREIMRYLDQYVIGQEKAKKVLSVAVYNHY---------KRLAAKANPNSLGAAEL 128
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNIL++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 129 DEVELQKSNILVIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRL 188
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 189 LQVADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQ 248
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR--ANMRAGGVT 501
G RKHP D IQIDT +ILFICGGAFV +EK I +R S+GF P A R +
Sbjct: 249 GGRKHPYQDCIQIDTSNILFICGGAFVGLEKVIEQRIGKKSMGFIKPGEQLAVTREQRLA 308
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
DA ++ +E DLI YG+IPEF+GR PV+ +L L E L +LT+PKNA+ KQ +
Sbjct: 309 DA------LKALEPEDLIKYGMIPEFIGRLPVVATLDPLDEKALEAILTQPKNAILKQAQ 362
Query: 562 KMFQMNG 568
K+ +M+G
Sbjct: 363 KLLRMDG 369
>gi|430375835|ref|ZP_19430238.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella macacae
0408225]
gi|429541066|gb|ELA09094.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella macacae
0408225]
Length = 428
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 174/316 (55%), Positives = 227/316 (71%), Gaps = 12/316 (3%)
Query: 259 SNLGNK-FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
N N+ PTPK+I + LD++VIGQ+RAKK L+VAVYNHY R+ + E
Sbjct: 59 ENWANRELPTPKQIREHLDEYVIGQDRAKKTLAVAVYNHYKRL---KVADQFQNEPKFVK 115
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
T G DD +EL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE
Sbjct: 116 T-GADDAMIELSKSNILLIGPTGSGKTLLAQTLARLIDVPFAIADATTLTEAGYVGEDVE 174
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL +DY++ Q+GI+YIDE+DKI++K E+++I+RDVSGEGVQQALLK++EGT+
Sbjct: 175 NIVLKLLQSADYDIEKTQKGIIYIDEIDKISRKGENVSITRDVSGEGVQQALLKLIEGTI 234
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
NVP +G RKHP + IQ+DT +IL ICGGAF ++K I +R + + IGF A V+A +
Sbjct: 235 TNVPPQGGRKHPNQEMIQVDTSNILVICGGAFAGLDKVIQQRTEKTGIGFNADVKAKDSS 294
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
+ L + VE DLI +GLIPE +GR PV+ +L L E L+Q+LTEPKNAL
Sbjct: 295 KKI------GELFKQVEPEDLIKFGLIPELIGRLPVVATLEELDEESLIQILTEPKNALV 348
Query: 558 KQYRKMFQM-NGQAAF 572
KQY +F M N + F
Sbjct: 349 KQYEYLFNMENAKLEF 364
>gi|90021256|ref|YP_527083.1| ATP-dependent protease ATP-binding subunit ClpX [Saccharophagus
degradans 2-40]
gi|123277147|sp|Q21KA8.1|CLPX_SACD2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|89950856|gb|ABD80871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Saccharophagus degradans 2-40]
Length = 431
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/307 (56%), Positives = 226/307 (73%), Gaps = 20/307 (6%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K PTP+EI + LD++VIGQ++AKKVL+VAVYNHY R+ +K
Sbjct: 63 GDKLPTPQEISETLDEYVIGQKQAKKVLAVAVYNHYKRLRVGDKKKSK------------ 110
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 111 --DDVELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 168
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 169 KLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 228
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT +ILFICGGAF ++K I +R + IGF A V++ V
Sbjct: 229 PQGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKDSGKNVG 288
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ + +E DL+ YGLIPEFVGR PV+ +L L ++ LV++L EPKN+L KQY
Sbjct: 289 ET------LRELEPEDLVRYGLIPEFVGRLPVIATLDELDQDALVRILKEPKNSLVKQYS 342
Query: 562 KMFQMNG 568
K+F+M G
Sbjct: 343 KLFEMEG 349
>gi|255019391|ref|ZP_05291500.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus ATCC 51756]
gi|340782144|ref|YP_004748751.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus SM-1]
gi|254971163|gb|EET28616.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus ATCC 51756]
gi|340556297|gb|AEK58051.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus SM-1]
Length = 427
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/308 (57%), Positives = 227/308 (73%), Gaps = 22/308 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P P EI K LD++VIGQ+ AKKVLSVAVYNHY R+ + R
Sbjct: 61 GSKLPKPMEIRKTLDEYVIGQDAAKKVLSVAVYNHYKRLEHGGKGGR------------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D+ VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 108 -DNDVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVENIIQ 166
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 167 KLLQKCDYDVEKAQTGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP 226
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT+ ILFICGGAF +EK ++ R + +GF A ++ T
Sbjct: 227 PQGGRKHPQQEFLQVDTRHILFICGGAFAGLEKAVASRVEKGGMGFNAQIKR-------T 279
Query: 502 DAVVTSSL-METVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D +S+L ME +E DL+ YGLIPEFVGR PV+ L L E+ LV +LTEP+N+L KQY
Sbjct: 280 DKQNSSNLMMENLEPEDLVRYGLIPEFVGRLPVIALLEELDEDALVSILTEPRNSLVKQY 339
Query: 561 RKMFQMNG 568
+K+F + G
Sbjct: 340 QKLFALEG 347
>gi|50083773|ref|YP_045283.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
ADP1]
gi|61211483|sp|Q6FEP7.1|CLPX_ACIAD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49529749|emb|CAG67461.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ADP1]
Length = 436
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/314 (55%), Positives = 224/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W +L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ AG+S
Sbjct: 53 GDWASRDL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KAGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
V VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GH-----VSKHEVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R + IGF A V+
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRHEKGGIGFNAEVKK 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 276 KDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEAALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +FQM
Sbjct: 330 NALTRQYQSLFQME 343
>gi|153000123|ref|YP_001365804.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS185]
gi|166215202|sp|A6WLQ2.1|CLPX_SHEB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151364741|gb|ABS07741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS185]
Length = 426
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNASPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGIELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L++PKNAL KQY
Sbjct: 280 EKATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYS 339
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 340 ALFEMEG 346
>gi|357418075|ref|YP_004931095.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoxanthomonas
spadix BD-a59]
gi|355335653|gb|AER57054.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoxanthomonas
spadix BD-a59]
Length = 428
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 227/305 (74%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ+RAK+ L+VAVYNHY RI ES QK D
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRI--ESRQK---------------SD 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERR-QDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT++ILFICGGAF ++K I R + S IGFGA V+++ + +
Sbjct: 229 GRKHPQQEFLQVDTRNILFICGGAFAGLDKIIQARSTEQSGIGFGAKVKSSAKKPEI--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E L+++LTEP+NA+ KQ++++
Sbjct: 286 ---GKVLSEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPRNAITKQFKRL 342
Query: 564 FQMNG 568
F M G
Sbjct: 343 FDMEG 347
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 177/316 (56%), Positives = 230/316 (72%), Gaps = 25/316 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP +I K LD++VIGQ+RAKKVL+VAVYNHY R+Y S T +GV
Sbjct: 679 LPTPHQIRKHLDQYVIGQDRAKKVLAVAVYNHYKRLY------------SDKTVNGV--- 723
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 724 --ELGKSNILLIGPTGSGKTLLAETLARRLDVPFAIADATTLTEAGYVGEDVENIVQKLL 781
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GI+YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP KG
Sbjct: 782 QNCDYDVEKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPKG 841
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R ++ IGFGA V++ + +D
Sbjct: 842 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVATNTGIGFGAEVKSEKQNASESD- 900
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ +E DLI +GLIPEF+GR PV+ +L L E L+Q+LTEPKNAL KQY+ +
Sbjct: 901 -----LLAQIEPEDLIKFGLIPEFIGRLPVVATLSELDEKALIQILTEPKNALTKQYQAL 955
Query: 564 FQM-NGQAAFYGKCFE 578
F + N + F + E
Sbjct: 956 FNLENTELEFSQEALE 971
>gi|162148814|ref|YP_001603275.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545438|ref|YP_002277667.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
diazotrophicus PAl 5]
gi|189044136|sp|A9HRV3.1|CLPX_GLUDA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161787391|emb|CAP56986.1| ATP-dependent Clp protease ATP-binding subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533115|gb|ACI53052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Gluconacetobacter diazotrophicus PAl 5]
Length = 419
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/303 (57%), Positives = 229/303 (75%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ + SQK ++
Sbjct: 63 PTPKEICKVLDDYVIGQFYAKKVLSVAVHNHYKRLAH--SQK---------------NND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + S IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS-------PDERR 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY ++FQ
Sbjct: 279 TGAILRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLFQ 338
Query: 566 MNG 568
M G
Sbjct: 339 MEG 341
>gi|71907347|ref|YP_284934.1| ATP-dependent protease ATP-binding subunit ClpX [Dechloromonas
aromatica RCB]
gi|123774411|sp|Q47FB7.1|CLPX_DECAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71846968|gb|AAZ46464.1| ClpX, ATPase regulatory subunit [Dechloromonas aromatica RCB]
Length = 420
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 173/303 (57%), Positives = 222/303 (73%), Gaps = 22/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI LD++VIGQE AK++LSVAVYNHY R+ + + ++AG+
Sbjct: 61 LPTPREISSILDQYVIGQEVAKRILSVAVYNHYKRLRHTA---KNAGD------------ 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 -VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +G
Sbjct: 165 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASIPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +Q+DT +ILFICGGAF +EK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKVIQSRSERGGIGFGAEVKSK------DDGK 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ E DLI +GLIPE +GR PV+ +L L E+ LVQ+LTEPKNAL KQY+K+F
Sbjct: 279 AVGKILLDAEPEDLIKFGLIPELIGRLPVVATLQELEESALVQILTEPKNALVKQYQKLF 338
Query: 565 QMN 567
M
Sbjct: 339 SME 341
>gi|208779708|ref|ZP_03247052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTG]
gi|254373012|ref|ZP_04988501.1| hypothetical protein FTCG_00586 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570739|gb|EDN36393.1| hypothetical protein FTCG_00586 [Francisella novicida GA99-3549]
gi|208744163|gb|EDZ90463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTG]
Length = 417
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNADVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|296536160|ref|ZP_06898288.1| ATP-dependent Clp protease ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
gi|296263531|gb|EFH10028.1| ATP-dependent Clp protease ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
Length = 418
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQE AKKVLSVAV+NHY R+ + G
Sbjct: 62 PTPREICKVLDDYVIGQEHAKKVLSVAVHNHYKRLAH-----------------GGKTGE 104
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 165 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 224
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I+ R + S IG+GA VR D
Sbjct: 225 RKHPQQEFLQVDTSNILFICGGAFAGLEKIIAGRGKGSGIGYGAEVRG-------PDERR 277
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E LV++LT+PKNAL KQY+++F+
Sbjct: 278 TGQILREVEPEDLLKFGLIPEFIGRLPVVATLDDLDEKALVEILTKPKNALVKQYQRLFE 337
Query: 566 MN 567
M
Sbjct: 338 ME 339
>gi|118497647|ref|YP_898697.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
novicida U112]
gi|194323618|ref|ZP_03057394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTE]
gi|118423553|gb|ABK89943.1| ATP-dependent Clp protease subunit X [Francisella novicida U112]
gi|194321982|gb|EDX19464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. novicida FTE]
Length = 417
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNADVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|389690969|ref|ZP_10179862.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microvirga
sp. WSM3557]
gi|388589212|gb|EIM29501.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microvirga
sp. WSM3557]
Length = 422
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/302 (57%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQE AKKVLSVAV+NHY R+ + + +
Sbjct: 64 PTPKEISRVLDDYVIGQEHAKKVLSVAVHNHYKRLAHATKH-----------------ND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGFGA V+A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGKGTSIGFGATVQA-------PDDRR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + +VE DL+ +GLIPEFVGR PVL +L L E L ++L EPKNAL KQY+++F+
Sbjct: 280 TGEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|337755600|ref|YP_004648111.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
sp. TX077308]
gi|336447205|gb|AEI36511.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
sp. TX077308]
Length = 417
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 220/305 (72%), Gaps = 22/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
K P P EI K LD ++IGQ AKKVLSVAVYNHY RI +E+++
Sbjct: 54 EKLPKPIEIKKYLDDYIIGQNNAKKVLSVAVYNHYKRITSETAK---------------- 97
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD +EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +
Sbjct: 98 DDDIELKKSNVLLLGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVR 157
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +D+++A AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 158 LLQNADFDIAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPP 217
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
KG RKHP + IQ+DT DILFICGGAF IEK + R SIGF A V +
Sbjct: 218 KGGRKHPNQEMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVVQQ------KN 271
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ T LM+ VES DL +GLIPE +GR P++ L L E LV++L EPKNAL KQY K
Sbjct: 272 SLDTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILMEPKNALIKQYVK 331
Query: 563 MFQMN 567
+F+ +
Sbjct: 332 LFEFD 336
>gi|410943167|ref|ZP_11374908.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
frateurii NBRC 101659]
Length = 421
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 228/303 (75%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEICK LD +VIGQ AK+ LSVAV+NHY R+ + +QK S
Sbjct: 63 PTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLAH--AQKNS---------------D 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVRSE-------DERR 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++++TVE DL+ +GLIPEF+GR PV+ +L L E L+Q+L++PKNAL KQY ++F+
Sbjct: 279 LGAILQTVEPEDLLKFGLIPEFIGRLPVIAALNDLDEAALIQILSKPKNALTKQYGRLFE 338
Query: 566 MNG 568
M G
Sbjct: 339 MEG 341
>gi|148553516|ref|YP_001261098.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
wittichii RW1]
gi|166215208|sp|A5V3U4.1|CLPX_SPHWW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148498706|gb|ABQ66960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
wittichii RW1]
Length = 424
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/303 (57%), Positives = 224/303 (73%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EIC+ LD++VIGQ +AK+VLSVAV+NHY R+ + + G D
Sbjct: 65 PTPHEICEHLDQYVIGQAKAKRVLSVAVHNHYKRLNHGAK--------------GAD--- 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGSGKTLLAQTMARLLDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I +R Q SIGFGA V A +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLQGKSIGFGAYVAA-------PEERR 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ E DL+ +GLIPEFVGR PV+ +L+ L E LV++LT PKNAL KQY+K+F
Sbjct: 281 TGETLQQCEPEDLLKFGLIPEFVGRLPVIATLMDLDEAALVEILTAPKNALVKQYQKLFD 340
Query: 566 MNG 568
M G
Sbjct: 341 MEG 343
>gi|392307872|ref|ZP_10270406.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
citrea NCIMB 1889]
Length = 428
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 225/309 (72%), Gaps = 23/309 (7%)
Query: 260 NLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTD 319
+ +K P PKEI LD +VIGQE AKKVLSVAVYNHY R+ N+ S K
Sbjct: 62 DAADKLPVPKEIRNHLDDYVIGQEHAKKVLSVAVYNHYKRLKNQGSAKGD---------- 111
Query: 320 GVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 112 ------VELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENI 165
Query: 380 LYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +
Sbjct: 166 IQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 225
Query: 440 VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAG 498
VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFGA V++ +
Sbjct: 226 VPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIDQRSHKNAGIGFGAQVKSEDSSR 285
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+ S + VE DL+ YGLIPEF+GR PV+ +L L E+ L+Q+L EPKNAL K
Sbjct: 286 SL------SETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEDALIQILNEPKNALTK 339
Query: 559 QYRKMFQMN 567
Q+ K+FQM
Sbjct: 340 QFAKLFQME 348
>gi|83592886|ref|YP_426638.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum ATCC 11170]
gi|386349616|ref|YP_006047864.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum F11]
gi|123739541|sp|Q2RU44.1|CLPX_RHORT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83575800|gb|ABC22351.1| ClpX, ATPase regulatory subunit [Rhodospirillum rubrum ATCC 11170]
gi|346718052|gb|AEO48067.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum F11]
Length = 422
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 177/302 (58%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+PK+I K LD +VIGQ+ AKKVLSVAV+NHY R+ AG++S
Sbjct: 64 PSPKDILKVLDDYVIGQQHAKKVLSVAVHNHYKRLSQ-------AGKNSD---------- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ IS R + SSIGFGA VR +A
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGKGSSIGFGADVRD-------PEARR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ YGLIPEFVGR PVL +L L E+ LV +LT PKNAL KQY+++F+
Sbjct: 280 TGEVLRAVEPEDLLKYGLIPEFVGRLPVLATLDDLDEDALVDILTTPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|172039351|ref|YP_001805852.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp.
ATCC 51142]
gi|354552382|ref|ZP_08971690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. ATCC 51472]
gi|226708146|sp|B1WUD2.1|CLPX_CYAA5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|171700805|gb|ACB53786.1| ATP-dependent Clp protease, ATPase subunit [Cyanothece sp. ATCC
51142]
gi|353555704|gb|EHC25092.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. ATCC 51472]
Length = 435
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 219/305 (71%), Gaps = 20/305 (6%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD++VIGQ+ AKKVLSVAVYNHY R+ S D
Sbjct: 71 KELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRL--------------SLVQGKND 116
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D +EL+KSNILLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 117 EDNIELQKSNILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVENILLR 176
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 177 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 236
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +E+ I +R S+GF P + D
Sbjct: 237 QGGRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRPGEGQSKEKRAAD 296
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
LM+ VE DL+ +G+IPEFVGR PV+ +L LTE LV +LT+P+NAL KQY+K
Sbjct: 297 ------LMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTKPRNALVKQYQK 350
Query: 563 MFQMN 567
+ M+
Sbjct: 351 LLNMD 355
>gi|312113124|ref|YP_004010720.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodomicrobium
vannielii ATCC 17100]
gi|311218253|gb|ADP69621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodomicrobium vannielii ATCC 17100]
Length = 422
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 176/303 (58%), Positives = 228/303 (75%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ+ AK+VLSVAV+NHY RI N S++ ++
Sbjct: 65 PTPQEICTVLDDYVIGQDYAKRVLSVAVHNHYKRI-NHSAK----------------NND 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 AADYNVDRAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I++R + SSIGFGA V + D
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIAQRGKSSSIGFGAKVTSE-------DDRR 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PVL +L L E LV++L+EPKNAL KQY+++F
Sbjct: 281 TGEILRGVEPEDLLRFGLIPEFIGRLPVLATLEDLDEVALVKILSEPKNALVKQYQRLFD 340
Query: 566 MNG 568
M G
Sbjct: 341 MEG 343
>gi|254374462|ref|ZP_04989943.1| hypothetical protein FTDG_00631 [Francisella novicida GA99-3548]
gi|385793030|ref|YP_005826006.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151572181|gb|EDN37835.1| hypothetical protein FTDG_00631 [Francisella novicida GA99-3548]
gi|332678355|gb|AEE87484.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida Fx1]
Length = 417
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNADVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|456354944|dbj|BAM89389.1| ATP-dependent protease ATP-binding subunit ClpX [Agromonas
oligotrophica S58]
Length = 424
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 223/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKHS----------------- 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|414173787|ref|ZP_11428414.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
broomeae ATCC 49717]
gi|410890421|gb|EKS38220.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
broomeae ATCC 49717]
Length = 424
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 225/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ+ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|167627760|ref|YP_001678260.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167597761|gb|ABZ87759.1| ATP-dependent Clp protease subunit X [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 417
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 176/307 (57%), Positives = 222/307 (72%), Gaps = 22/307 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ KKVLSVAVYNHY RI + +++ DD
Sbjct: 55 KLPKPIEIKKYLDDYIIGQDNPKKVLSVAVYNHYKRITSNTTK---------------DD 99
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
DT EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 100 DT-ELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK + R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ T LM+ VES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILTEPKNALIKQYVKL 332
Query: 564 FQMNGQA 570
F+ + A
Sbjct: 333 FKFDDVA 339
>gi|339021746|ref|ZP_08645738.1| Clp protease ATP-binding subunit ClpX [Acetobacter tropicalis NBRC
101654]
gi|338751242|dbj|GAA09042.1| Clp protease ATP-binding subunit ClpX [Acetobacter tropicalis NBRC
101654]
Length = 421
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 226/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ T ++
Sbjct: 63 PTPKEICKVLDDYVIGQFEAKKVLSVAVHNHYKRL-----------------TQSAKNND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT ++LFICGGAF ++K I+ R + + IGFGA VR+ + R G
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIIAARGKGTGIGFGADVRSPDDRRMG----- 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DL+ +GLIPEF+GR PVL +L L E L+++LTEPKNAL KQY+++
Sbjct: 281 ----EILHDVEPEDLMKFGLIPEFIGRLPVLATLGDLDEAALIRILTEPKNALVKQYQRL 336
Query: 564 FQMN 567
FQM
Sbjct: 337 FQME 340
>gi|126668932|ref|ZP_01739873.1| ATP-dependent protease ATP-binding subunit [Marinobacter sp. ELB17]
gi|126626595|gb|EAZ97251.1| ATP-dependent protease ATP-binding subunit [Marinobacter sp. ELB17]
Length = 427
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 174/308 (56%), Positives = 231/308 (75%), Gaps = 27/308 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + L+++VIGQ+RAK VL+VAVYNHY R+ GE +
Sbjct: 65 DRLPTPAEIRETLNEYVIGQDRAKVVLAVAVYNHYKRL--------RYGEGKA------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 --DVELGKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV--RANMRAGGV 500
+G RKHP+ + +Q++T +ILFICGGAF +EK I +R SSIGF A V + N+++ G
Sbjct: 228 QGGRKHPQQEFLQVNTSNILFICGGAFAGLEKVIQQRSARSSIGFSAEVASKDNIKSAG- 286
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
+++ V++ DL+ +GLIPEFVGR PV+ +L L E+ L+Q+LTEPKNAL KQY
Sbjct: 287 -------EIIKDVQTEDLVKFGLIPEFVGRLPVVATLTELDEDALIQILTEPKNALTKQY 339
Query: 561 RKMFQMNG 568
+K+F+M G
Sbjct: 340 QKLFEMEG 347
>gi|89256250|ref|YP_513612.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica LVS]
gi|156502311|ref|YP_001428376.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|254367563|ref|ZP_04983589.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica 257]
gi|254369240|ref|ZP_04985252.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica FSC022]
gi|422938669|ref|YP_007011816.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FSC200]
gi|423050598|ref|YP_007009032.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica F92]
gi|89144081|emb|CAJ79332.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica LVS]
gi|134253379|gb|EBA52473.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica 257]
gi|156252914|gb|ABU61420.1| ATP-dependent Clp protease, ATP-binding subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122190|gb|EDO66330.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica FSC022]
gi|407293820|gb|AFT92726.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FSC200]
gi|421951320|gb|AFX70569.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica F92]
Length = 417
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNADVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|406980052|gb|EKE01719.1| hypothetical protein ACD_21C00067G0003 [uncultured bacterium]
Length = 421
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 173/303 (57%), Positives = 219/303 (72%), Gaps = 21/303 (6%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP+EI KGL+ +VIGQE AKK LSVAVYNHY R+ ++ D +D
Sbjct: 61 KLPTPEEINKGLNDYVIGQEYAKKALSVAVYNHYKRLAHK---------------DKKND 105
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVG+D+E+I+ KL
Sbjct: 106 GDVELSKSNILLIGPTGSGKTLLAETLARMLNVPFAIADATTLTEAGYVGDDIETIVQKL 165
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+ A+ GI+YIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LQKCDYDTKKAETGIIYIDEIDKISRKSDSASITRDVSGEGVQQALLKLIEGTVASVPPH 225
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G+RKHP+ + +Q++TK+ILFICGGAF +++K I R + S IGF A + V
Sbjct: 226 GSRKHPQQEYLQVNTKNILFICGGAFAELDKIIKTRTEKSGIGFAAEIYGEKNKKDV--- 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEFVGR PV+ L L E +LV+VL EPKNAL KQY K+
Sbjct: 283 ---GELLRQVEPEDLIKFGLIPEFVGRLPVIAVLDELEETELVRVLKEPKNALTKQYHKL 339
Query: 564 FQM 566
F M
Sbjct: 340 FMM 342
>gi|339483338|ref|YP_004695124.1| ATP-dependent Clp protease ATP-binding subunit clpX [Nitrosomonas
sp. Is79A3]
gi|338805483|gb|AEJ01725.1| ATP-dependent Clp protease ATP-binding subunit clpX [Nitrosomonas
sp. Is79A3]
Length = 425
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 220/304 (72%), Gaps = 21/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EIC+ LD++VIGQE AKK+LSVAVYNHY R+ N T D D
Sbjct: 63 LPVPREICQILDQYVIGQESAKKILSVAVYNHYKRLKN--------------VTKSDDTD 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF++ADAT LT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELSKSNILLVGPTGSGKTLLAQTLARLLDVPFIMADATALTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+ AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 QKCNYDAEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAMVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQ+DT +ILFICGGAF ++K I R + IGFG V+ + R
Sbjct: 229 GRKHPNQEFIQVDTTNILFICGGAFDGLDKVIRARTEKGGIGFGVDVKNHTRKD------ 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ +++ VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY KMF
Sbjct: 283 -MNKVLQQVEPEDLVKFGLIPEFVGRLPVVATLEELNEAALIQILTEPKNALVKQYWKMF 341
Query: 565 QMNG 568
M G
Sbjct: 342 NMEG 345
>gi|397687161|ref|YP_006524480.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 10701]
gi|395808717|gb|AFN78122.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 10701]
Length = 426
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 223/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
K P PKEI LD++VIGQERAKK+L+VAVYNHY R+ N+ +K
Sbjct: 62 AQKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --EEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTKGGIGFNAEVRSKDLGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 ES------LRVVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYA 338
Query: 562 KMFQMNG 568
K+F++ G
Sbjct: 339 KLFELEG 345
>gi|237747782|ref|ZP_04578262.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
OXCC13]
gi|229379144|gb|EEO29235.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
OXCC13]
Length = 423
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 181/311 (58%), Positives = 226/311 (72%), Gaps = 23/311 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G G++ PTPKEIC LD++VIGQE+AKK+LSVAVYNHY R+ K G+
Sbjct: 58 GQENGSELPTPKEICNLLDQYVIGQEQAKKILSVAVYNHYKRL------KFYGGK----- 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE
Sbjct: 107 -----NDDVELSKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVE 161
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL +Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLKM+EGT+
Sbjct: 162 NIIQKLLQGCEYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKMIEGTM 221
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP D I +DT +I+FICGGAF + K IS R + IGF A V++
Sbjct: 222 ASVPPQGGRKHPNQDFISVDTTNIMFICGGAFDGLTKIISNRSEKGGIGFSARVKSP--- 278
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
TD +V S + VE DLI +GLIPE +GR PV+ L LTE LV +L +PKNAL
Sbjct: 279 ---TD-IVESEKLADVEPEDLIKFGLIPELIGRLPVVAVLHELTEEALVDILEKPKNALV 334
Query: 558 KQYRKMFQMNG 568
KQY K+ QM G
Sbjct: 335 KQYTKLLQMEG 345
>gi|188996269|ref|YP_001930520.1| ATP-dependent protease ATP-binding subunit ClpX
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931336|gb|ACD65966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 408
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 223/307 (72%), Gaps = 25/307 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP EI LD++VIGQE+AKK+LSVAVYNHY RIY + K
Sbjct: 54 SKLPTPAEIKAKLDEYVIGQEKAKKILSVAVYNHYKRIYQKELFK--------------- 98
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VE+EKSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESIL +
Sbjct: 99 DKDVEIEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESILAR 158
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
LL +DY+V AA++GIVYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGT+ NVP
Sbjct: 159 LLQNADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIANVP 218
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP + IQIDT +ILFI GGAFV +E I +R SIGFGA +++
Sbjct: 219 PQGGRKHPHQEFIQIDTTNILFILGGAFVGLEDIIKQRIGKKSIGFGADIKSKSE----- 273
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
L+ V+ DLI +GLIPEF+GR PV+ +L L E+ LV+VLTEPKNAL KQY+
Sbjct: 274 ----EKELLSLVQPEDLIKFGLIPEFLGRIPVIATLEELDEDALVRVLTEPKNALIKQYK 329
Query: 562 KMFQMNG 568
+ ++G
Sbjct: 330 SLLAIDG 336
>gi|345864968|ref|ZP_08817162.1| ATP-dependent Clp protease ATP-binding subunit ClpX [endosymbiont
of Tevnia jerichonana (vent Tica)]
gi|345878325|ref|ZP_08830044.1| ATP-dependent Clp protease ATP-binding subunit clpX [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|344224680|gb|EGV51064.1| ATP-dependent Clp protease ATP-binding subunit clpX [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|345123906|gb|EGW53792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [endosymbiont
of Tevnia jerichonana (vent Tica)]
Length = 425
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 178/311 (57%), Positives = 224/311 (72%), Gaps = 23/311 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + P P EI K LD++VIGQ+RAKKVLSVAVYNHY R+ S G+ S
Sbjct: 58 GEKSSDSLPRPHEINKTLDQYVIGQQRAKKVLSVAVYNHYKRL-------ESLGKESD-- 108
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE
Sbjct: 109 --------IELAKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVE 160
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 161 NIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTV 220
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFI GGAF +EK I +R + IGF A V + A
Sbjct: 221 ASVPPQGGRKHPQQEFLQVDTSNILFIVGGAFSGLEKVIKDRSEKGGIGFSAEVHSKDEA 280
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
V + +V VE DLI YGLIPEFVGR PV+ +L L E+ LV++LTEPKNAL
Sbjct: 281 RSVGEIIV------DVEPEDLIKYGLIPEFVGRLPVVATLQELDEDSLVKILTEPKNALT 334
Query: 558 KQYRKMFQMNG 568
KQY ++F+M G
Sbjct: 335 KQYGRLFEMEG 345
>gi|262276277|ref|ZP_06054086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Grimontia
hollisae CIP 101886]
gi|262220085|gb|EEY71401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Grimontia
hollisae CIP 101886]
Length = 426
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 226/307 (73%), Gaps = 23/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ PTP+EI LD +VIGQ+RAKKVLSVAVYNHY R+ N T DGV
Sbjct: 63 NELPTPQEIRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRN-----------GDTTADGV- 110
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 ----ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+VA A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVAKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTIASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K + +R + S IGFGA VR+ + ++
Sbjct: 227 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVDQRVAKGSGIGFGAEVRSKDQEASLS 286
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D L VE DL+ YGLIPEF+GR PV L L E+ LVQ+L EPKNAL KQY
Sbjct: 287 D------LFSKVEPEDLVKYGLIPEFIGRLPVTAILGELDEDALVQILREPKNALTKQYA 340
Query: 562 KMFQMNG 568
+ +++G
Sbjct: 341 ALLELDG 347
>gi|121593622|ref|YP_985518.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
JS42]
gi|222110342|ref|YP_002552606.1| ATP-dependent protease ATP-binding subunit clpx [Acidovorax ebreus
TPSY]
gi|166214752|sp|A1W5B7.1|CLPX_ACISJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763845|sp|B9MG15.1|CLPX_ACIET RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120605702|gb|ABM41442.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
sp. JS42]
gi|221729786|gb|ACM32606.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
ebreus TPSY]
Length = 421
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 223/304 (73%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AK+ L+VAVYNHY R+ + K AG+ D
Sbjct: 65 LPTPAEIKTNLDHYVIGQEKAKRTLAVAVYNHYKRLRH----KDKAGK-----------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA VR+ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSKKQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + + +E DLI +GLIPE VGR PV+ +L L+E+ LVQ+LTEPKNAL KQY K+
Sbjct: 284 -LTEVFQDIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|319943617|ref|ZP_08017898.1| ATP-dependent Clp protease ATP-binding subunit [Lautropia mirabilis
ATCC 51599]
gi|319742850|gb|EFV95256.1| ATP-dependent Clp protease ATP-binding subunit [Lautropia mirabilis
ATCC 51599]
Length = 421
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 175/306 (57%), Positives = 224/306 (73%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P EI LD++VIGQ++AK+ L+VAVYNHY R+ ++ D
Sbjct: 61 SELPIPSEIAAILDQYVIGQQKAKRTLAVAVYNHYKRLRHKG-----------------D 103
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVESI+ K
Sbjct: 104 KDDVELTKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVESIIQK 163
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +Y + AQ GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTV ++P
Sbjct: 164 LLAACNYEIDKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASIPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D +Q+DT +ILFICGGAF ++K I +R + S IGFGA V+ G +D
Sbjct: 224 QGGRKHPNQDFVQVDTTNILFICGGAFDGMDKVIRDRSERSGIGFGAQVK------GASD 277
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ S L + +E DLI +GLIPE VGR PVL +L L E LV++LTEPKNAL KQY+K
Sbjct: 278 RSL-SELFQDIEPDDLIKFGLIPELVGRLPVLATLDELDEATLVRILTEPKNALVKQYQK 336
Query: 563 MFQMNG 568
+F M G
Sbjct: 337 LFSMEG 342
>gi|406999543|gb|EKE17146.1| hypothetical protein ACD_10C00602G0003 [uncultured bacterium]
Length = 420
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 221/303 (72%), Gaps = 22/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EIC LD++VIGQ AK++L+VAVYNHY R+ + + + AGE
Sbjct: 61 LPTPREICSILDEYVIGQVVAKRILAVAVYNHYKRLRHSA---KHAGE------------ 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 -VELAKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY++ AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV ++P +G
Sbjct: 165 QKCDYDIEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +Q+DT +ILFICGGAF +EK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKIIQNRSEKGGIGFGAEVKSK------EDKK 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ E DLI +GLIPE +GR PV+ +L L E L+Q+LTEPKNAL KQY+K+F
Sbjct: 279 AIGQILLDAEPEDLIKFGLIPELIGRLPVVATLQELEEPALIQILTEPKNALIKQYQKLF 338
Query: 565 QMN 567
M
Sbjct: 339 SME 341
>gi|260575567|ref|ZP_05843565.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sp. SW2]
gi|259022210|gb|EEW25508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sp. SW2]
Length = 421
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/311 (56%), Positives = 229/311 (73%), Gaps = 25/311 (8%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + PTP++ICK LD +VIGQ AK+VLSVAV+NHY R+ N SS+
Sbjct: 56 GLKASDGVPTPRDICKVLDDYVIGQIHAKRVLSVAVHNHYKRL-NHSSK----------- 103
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
TD +EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 104 TD------IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVE 157
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 158 NIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTV 217
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I++R + S+IGFGA V+
Sbjct: 218 ASVPPQGGRKHPQQEFLQVDTTNILFICGGAFSGLEKIIAQRNKGSAIGFGAEVKGPEDR 277
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
G L + +E DL+ +GLIPEFVGR PV+ +L L E LV +LTEPKNAL
Sbjct: 278 G-------VGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALV 330
Query: 558 KQYRKMFQMNG 568
KQY+++F++ G
Sbjct: 331 KQYQRLFEIEG 341
>gi|225023958|ref|ZP_03713150.1| hypothetical protein EIKCOROL_00825 [Eikenella corrodens ATCC
23834]
gi|224942983|gb|EEG24192.1| hypothetical protein EIKCOROL_00825 [Eikenella corrodens ATCC
23834]
Length = 418
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 220/306 (71%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI L++ VIGQE+AKKVL+VAVYNHY R+ R E
Sbjct: 56 DRLPTPAEIVSNLNQHVIGQEQAKKVLAVAVYNHYKRL-------RYPKEG--------- 99
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ K
Sbjct: 100 -DNVELAKSNILLIGPTGSGKTLLAQSLARRLDVPFVMADATTLTEAGYVGEDVEQIITK 158
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL D+NV AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 159 LLGNCDFNVEKAQNGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 218
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQ+DT +ILFICGGAF +EK I +R + IGFGA V + VT+
Sbjct: 219 QGGRKHPNQDFIQVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDEDADVTE 278
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L E VE DLI +GLIPE +GR PV+ +L L E L+ +LTEPKNAL KQY+
Sbjct: 279 ------LFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEEALISILTEPKNALVKQYQT 332
Query: 563 MFQMNG 568
+F+M G
Sbjct: 333 LFEMEG 338
>gi|197284028|ref|YP_002149900.1| ATP-dependent protease ATP-binding subunit ClpX [Proteus mirabilis
HI4320]
gi|227358101|ref|ZP_03842443.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
ATCC 29906]
gi|425066921|ref|ZP_18470037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW6]
gi|425073646|ref|ZP_18476752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW4]
gi|238693153|sp|B4EU54.1|CLPX_PROMH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|194681515|emb|CAR40395.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
HI4320]
gi|227161836|gb|EEI46868.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
ATCC 29906]
gi|404594917|gb|EKA95472.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW4]
gi|404601592|gb|EKB01984.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW6]
Length = 423
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 224/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI K LD +VIGQE AKKVL+VAVYNHY R+ N G
Sbjct: 62 SELPTPHEIRKHLDDYVIGQELAKKVLAVAVYNHYKRLRN-----------------GDK 104
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 ADGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 LLQKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K +++R S IGFGA V++
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQ------N 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ VE DLI +GLIPEF+GR PV+ +L L E+ L+Q+L EPKNAL KQY+
Sbjct: 279 EKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEDALIQILQEPKNALTKQYQ 338
Query: 562 KMFQMNG 568
+F++ G
Sbjct: 339 ALFKLEG 345
>gi|86749682|ref|YP_486178.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris HaA2]
gi|123292611|sp|Q2IWZ3.1|CLPX_RHOP2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86572710|gb|ABD07267.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris HaA2]
Length = 424
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|91775763|ref|YP_545519.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacillus
flagellatus KT]
gi|122985527|sp|Q1H1F9.1|CLPX_METFK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91709750|gb|ABE49678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacillus flagellatus KT]
Length = 421
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTPKEIC LD++VIGQ +AKK L+VAVYNHY R+ + QK
Sbjct: 62 KLPTPKEICAILDQYVIGQTQAKKNLAVAVYNHYKRL-EQGGQK---------------- 104
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VE+ KSNIL++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 DDVEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKL 164
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 165 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 224
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + +Q+DT +ILFICGGAF +EK I R + IGFGA V++ DA
Sbjct: 225 GGRKHPNQEFVQLDTTNILFICGGAFDGLEKIIRRRSEKGGIGFGAEVKSK------EDA 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR P + +L +L E+ LV +L EPKNAL KQY K+
Sbjct: 279 RAIGEVLRDVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALVTILVEPKNALTKQYIKL 338
Query: 564 FQMNG 568
F+M G
Sbjct: 339 FKMEG 343
>gi|114563761|ref|YP_751274.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
frigidimarina NCIMB 400]
gi|122299289|sp|Q07ZX9.1|CLPX_SHEFN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114335054|gb|ABI72436.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
frigidimarina NCIMB 400]
Length = 426
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 174/306 (56%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ K LD +VIGQ++AKKVL+VAVYNHY R+ N G
Sbjct: 63 DKLPTPHELRKHLDDYVIGQDQAKKVLAVAVYNHYKRLRN-----------------GAI 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 KDGVELGKSNILLLGPTGSGKTLLAETLARSLNVPFAMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R + IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHTGTGIGFGAEVK------GEA 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S ++ VE DL+ +GLIPEF+GR PV+ +L L E LVQ+L+EPKNAL KQY
Sbjct: 280 DKATISQILSQVEPGDLVKFGLIPEFIGRLPVVATLTELDEAALVQILSEPKNALTKQYS 339
Query: 562 KMFQMN 567
+F+M
Sbjct: 340 ALFEME 345
>gi|260222836|emb|CBA32802.1| ATP-dependent Clp protease ATP-binding subunit clpX [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 421
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 220/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP +I LD +VIGQE AK+ L+VAVYNHY R+ ++ K+ D
Sbjct: 65 LPTPADIKANLDNYVIGQEPAKRTLAVAVYNHYKRLKHKEKAKK---------------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVLKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFVQIDTTNILFICGGAFAGLEKVIESRTESSGIGFGAAVKSKQQRA------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + + VE DLI +GLIPE VGR PV+ +L LTE LVQ+LTEPKNAL KQY K+
Sbjct: 284 -LTEVFKEVEPEDLIKFGLIPELVGRMPVVATLAELTEEALVQILTEPKNALVKQYAKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|395762550|ref|ZP_10443219.1| ATP-dependent protease ATP-binding subunit ClpX [Janthinobacterium
lividum PAMC 25724]
Length = 422
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 220/304 (72%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI LD++VIGQ+ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPQEIAALLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + K I+ R + S IGF A VR+ ++
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLSKVIANRSEKSGIGFSATVRSKSQSSA----- 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S LM E DL+ +GLIPE VGR PV+ +L LTE L+Q+L EPKNAL KQY K+
Sbjct: 283 --SELMLQAEPEDLVKFGLIPELVGRLPVIATLAELTEEALIQILVEPKNALIKQYSKLL 340
Query: 565 QMNG 568
+M G
Sbjct: 341 EMEG 344
>gi|338739741|ref|YP_004676703.1| ATP-dependent Clp protease, ATP-binding subunit [Hyphomicrobium sp.
MC1]
gi|337760304|emb|CCB66135.1| ATP-dependent Clp protease, ATP-binding subunit [Hyphomicrobium sp.
MC1]
Length = 416
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ AK+VLSVAV+NHY R+ + S ++
Sbjct: 59 PTPQEICGVLDSYVIGQNHAKRVLSVAVHNHYKRLNHASK-----------------NND 101
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 162 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + SSIGF A V D
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFQARVSG-------PDERR 274
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E+ LVQ+LTEPKNA+ KQY+++F+
Sbjct: 275 TGEILRNVEPEDLLKFGLIPEFIGRLPVIATLEDLDESALVQILTEPKNAIVKQYQRLFE 334
Query: 566 MN 567
M
Sbjct: 335 ME 336
>gi|83949689|ref|ZP_00958422.1| ATP-dependent protease ATP-binding subunit [Roseovarius nubinhibens
ISM]
gi|83837588|gb|EAP76884.1| ATP-dependent protease ATP-binding subunit [Roseovarius nubinhibens
ISM]
Length = 421
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 174/311 (55%), Positives = 229/311 (73%), Gaps = 24/311 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G G PTP+EIC LD +VIGQ AK+VLSVAV+NHY R+ + +G+S
Sbjct: 56 GLKSGEGVPTPREICDVLDDYVIGQAMAKRVLSVAVHNHYKRLNH-------SGKSGD-- 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+EL+KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 107 --------IELQKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVE 158
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 159 NIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTV 218
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
VP +G RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VR N
Sbjct: 219 AAVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDNDDR 278
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
G + + +E DL+ +GLIPEFVGR PV+ +L L E+ L+ +LTEPKNAL
Sbjct: 279 G-------VGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTEPKNALV 331
Query: 558 KQYRKMFQMNG 568
KQY+++F++ G
Sbjct: 332 KQYQRLFELEG 342
>gi|365873787|ref|ZP_09413320.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermanaerovibrio velox DSM 12556]
gi|363983874|gb|EHM10081.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermanaerovibrio velox DSM 12556]
Length = 429
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 179/312 (57%), Positives = 225/312 (72%), Gaps = 24/312 (7%)
Query: 257 GGSNLG-NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
G LG +K P P EI LD++VIGQ++AKKVLSVAVYNHY RI
Sbjct: 64 GKEPLGLDKIPRPDEIKSFLDQYVIGQDQAKKVLSVAVYNHYRRI--------------- 108
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
T D++ VEL KSN+LL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGED
Sbjct: 109 --TSAPDEEDVELPKSNVLLVGPTGSGKTLLAQTLARLLKVPFAIADATTLTEAGYVGED 166
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VE+IL +LL +DY+V AA++GI+YIDE+DKI++K+ES +I+RDVSGEGVQQALL++LEG
Sbjct: 167 VENILVRLLQAADYDVKAAERGIIYIDEIDKISRKSESPSITRDVSGEGVQQALLRILEG 226
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
TV NVP KG RKHP D IQ+DTK+ILFICGGAF +E I+ R IGFG V
Sbjct: 227 TVANVPPKGGRKHPNQDFIQVDTKNILFICGGAFDGLEPIIARRTNKKVIGFGGDV---- 282
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
D +SL + + + DLI YG IPEFVGR PV+V L +L E L+++L EP+NA
Sbjct: 283 --ASAKDLDKRNSLYKDLIADDLITYGFIPEFVGRLPVIVPLESLDEEALIRILQEPRNA 340
Query: 556 LGKQYRKMFQMN 567
L KQY+++F+M+
Sbjct: 341 LIKQYQRIFEMD 352
>gi|365174863|ref|ZP_09362301.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synergistes
sp. 3_1_syn1]
gi|363613728|gb|EHL65233.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synergistes
sp. 3_1_syn1]
Length = 440
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 226/305 (74%), Gaps = 22/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P P EI + LD++VIGQ +AKKVLSVAVYNHY R+ N + V
Sbjct: 80 DKLPKPAEIKEFLDQYVIGQAQAKKVLSVAVYNHYKRLLNPA----------------VG 123
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF + DATTLT+AGYVGEDVE+IL +
Sbjct: 124 DDDVELPKSNVLLVGPTGSGKTLLAQTLAKMLHVPFAMTDATTLTEAGYVGEDVENILLR 183
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +D+++ AA++GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV N+P
Sbjct: 184 LLQAADFDIQAAERGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKIIEGTVANIPP 243
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
KG RKHP + I IDT +ILFICGGAF +EK IS+R + +GFG + +N+
Sbjct: 244 KGGRKHPSQEMIPIDTSNILFICGGAFDGLEKIISQRTNEKQLGFGGEISSNVSKRS--- 300
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ L++ +E DL +YG IPEF+GR PVLV+L +L+E+ LV++L EPKNA KQY+K
Sbjct: 301 ---SAELLKKLEPDDLRSYGFIPEFIGRLPVLVALESLSEDALVRILKEPKNAPLKQYKK 357
Query: 563 MFQMN 567
+F +
Sbjct: 358 LFALE 362
>gi|398823689|ref|ZP_10582045.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. YR681]
gi|398225662|gb|EJN11928.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. YR681]
Length = 423
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGRSTSIGFAAQVMAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LTEPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEVSLKKILTEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|225848211|ref|YP_002728374.1| ATP-dependent protease ATP-binding subunit ClpX
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643885|gb|ACN98935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 405
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/307 (57%), Positives = 225/307 (73%), Gaps = 25/307 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI LD++VIGQE+AKK+LSVAVYNHY RIY + K +
Sbjct: 51 SQLPTPAEIKAKLDEYVIGQEKAKKILSVAVYNHYKRIYQKDLFKNTG------------ 98
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VE+EKSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESIL +
Sbjct: 99 ---VEVEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESILAR 155
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
LL +DY+V AA++GIVYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGT+ NVP
Sbjct: 156 LLQNADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIANVP 215
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP + IQIDT +ILFI GGAFV +E I +R +IGFGA +++ G
Sbjct: 216 PQGGRKHPHQEFIQIDTTNILFILGGAFVGLEDIIRQRLGKKAIGFGAEIKSKKEEG--- 272
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
L+E V+ DLI +GLIPEF+GR PV+ +L L E+ LV+VLTEPKNAL KQY+
Sbjct: 273 ------DLLEQVQPEDLIKFGLIPEFLGRIPVIATLKELDEDMLVRVLTEPKNALIKQYQ 326
Query: 562 KMFQMNG 568
+ ++G
Sbjct: 327 ALLAVDG 333
>gi|165924017|ref|ZP_02219849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii Q321]
gi|165916540|gb|EDR35144.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii Q321]
Length = 422
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/312 (55%), Positives = 225/312 (72%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG+ K PTP EI + LD++VIGQE AKKVLSVAVYNHY R+ N++ +
Sbjct: 54 GGAQ--KKLPTPPEIHRKLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKK---------- 101
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D+VE+ KSNILL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDV
Sbjct: 102 -------DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDV 154
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y+V A+ GI+YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGT
Sbjct: 155 ENIIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGT 214
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V ++P +G RKHP+ + +Q+DT +ILFICGGAF D+ K I R S IGF A VR
Sbjct: 215 VASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRPKED 274
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ S L++ E DLI YGLIPEFVGR P++ +L L E+ L+++LTEPKNAL
Sbjct: 275 F-----SREASKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNAL 329
Query: 557 GKQYRKMFQMNG 568
KQYRK+F+ G
Sbjct: 330 VKQYRKLFEFEG 341
>gi|338981065|ref|ZP_08632301.1| ClpX [Acidiphilium sp. PM]
gi|338208031|gb|EGO95930.1| ClpX [Acidiphilium sp. PM]
Length = 375
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 229/303 (75%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ+ AK++LSVAV+NHY R+ + +QK ++
Sbjct: 20 PTPREICKVLDDYVIGQDHAKRILSVAVHNHYKRLAH--AQK---------------NND 62
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+E+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 63 IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 122
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 123 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 182
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I++R + S IGFGA VR
Sbjct: 183 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQR------- 235
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY ++F+
Sbjct: 236 TGAILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLFE 295
Query: 566 MNG 568
M G
Sbjct: 296 MEG 298
>gi|126732555|ref|ZP_01748353.1| ATP-dependent protease ATP-binding subunit [Sagittula stellata
E-37]
gi|126707001|gb|EBA06069.1| ATP-dependent protease ATP-binding subunit [Sagittula stellata
E-37]
Length = 421
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 227/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC+ LD +VIGQ +AK+VLSVAV+NHY R+ + SQK S
Sbjct: 64 PTPREICEVLDDYVIGQMKAKRVLSVAVHNHYKRLNH--SQKSS---------------D 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + S++GFGA VR N G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDNDDRG------- 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PV+ +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 280 VGEIFRDLEPEDLLKFGLIPEFVGRLPVVATLEDLDEDALVTILTQPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|237755490|ref|ZP_04584112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692354|gb|EEP61340.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 408
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 223/307 (72%), Gaps = 25/307 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI LD++VIGQERAKK+LSVAVYNHY RIY + K
Sbjct: 54 SELPTPAEIKAKLDEYVIGQERAKKILSVAVYNHYKRIYQKELFK--------------- 98
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VE+EKSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESIL +
Sbjct: 99 DKDVEIEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESILAR 158
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
LL +DY+V AA++GIVYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGT+ NVP
Sbjct: 159 LLQNADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIANVP 218
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP + IQIDT +ILFI GGAFV +E I +R SIGFGA +++
Sbjct: 219 PQGGRKHPHQEFIQIDTTNILFILGGAFVGLEDIIKQRIGKKSIGFGADIKSKSE----- 273
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
L+ V+ DLI +GLIPEF+GR PV+ +L L E+ LV+VLTEPKNAL KQY+
Sbjct: 274 ----EKDLLSLVQPEDLIKFGLIPEFLGRIPVIATLEELDEDALVRVLTEPKNALIKQYK 329
Query: 562 KMFQMNG 568
+ ++G
Sbjct: 330 SLLAIDG 336
>gi|209885040|ref|YP_002288897.1| ATP-dependent protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
gi|337741328|ref|YP_004633056.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
gi|386030344|ref|YP_005951119.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM4]
gi|229484078|sp|B6JGU8.1|CLPX_OLICO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209873236|gb|ACI93032.1| ATP-dependent Clp protease [Oligotropha carboxidovorans OM5]
gi|336095412|gb|AEI03238.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM4]
gi|336098992|gb|AEI06815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
Length = 424
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQAHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAASVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++L EPKNAL KQY++
Sbjct: 282 -----EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|110633523|ref|YP_673731.1| ATP-dependent protease ATP-binding subunit ClpX [Chelativorans sp.
BNC1]
gi|123162493|sp|Q11J59.1|CLPX_MESSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110284507|gb|ABG62566.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Chelativorans
sp. BNC1]
Length = 424
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/311 (57%), Positives = 232/311 (74%), Gaps = 29/311 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI + LD +VIGQ AK+VLSVAV+NHY R+ + AG+++
Sbjct: 66 PTPQEIMEVLDDYVIGQTYAKRVLSVAVHNHYKRLAH-------AGKNAD---------- 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF +EK IS+R + +SIGFGA V + + RAG
Sbjct: 229 RKHPQQEFLQVDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSPEDRRAG----- 283
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DL+ +GLIPEFVGR P+L +L L E LVQ+LTEPKNAL KQY+++
Sbjct: 284 ----ELLRQVEPEDLLKFGLIPEFVGRLPILATLEDLDEEALVQILTEPKNALVKQYQRL 339
Query: 564 FQM-NGQAAFY 573
F+M N + F+
Sbjct: 340 FEMENVELTFH 350
>gi|337279217|ref|YP_004618689.1| ATP-dependent Clp protease ATP-binding subunit [Ramlibacter
tataouinensis TTB310]
gi|334730294|gb|AEG92670.1| candidate ATP-dependent Clp protease ATP-binding subunit
[Ramlibacter tataouinensis TTB310]
Length = 421
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/304 (57%), Positives = 221/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AK+ LSVAVYNHY R+ ++ K+ D
Sbjct: 65 LPTPGEIKSNLDNYVIGQETAKRALSVAVYNHYKRLRHKDKAKK---------------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I +R + S IGFGA V++ + +TD
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIEQRTEASGIGFGAAVKSK-KQRSLTD-- 286
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ VE DLI +GLIPE VGR PV+ +L L+E LVQ+LTEPKNAL KQY K+
Sbjct: 287 ----VFREVEPEDLIKFGLIPELVGRMPVVATLAELSEEALVQILTEPKNALVKQYGKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 SMEG 346
>gi|409401839|ref|ZP_11251493.1| ATP-dependent protease ATP-binding subunit ClpX [Acidocella sp.
MX-AZ02]
gi|409129476|gb|EKM99327.1| ATP-dependent protease ATP-binding subunit ClpX [Acidocella sp.
MX-AZ02]
Length = 418
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 225/303 (74%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ AK+VLSVAV+NHY R+ + + +
Sbjct: 63 PTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLSHATKS-----------------ND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGKGSGIGFGADVRSQ-------DERR 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY ++F+
Sbjct: 279 MGAILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLFE 338
Query: 566 MNG 568
M G
Sbjct: 339 MEG 341
>gi|403387722|ref|ZP_10929779.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium sp.
JC122]
Length = 430
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/303 (58%), Positives = 228/303 (75%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI K LD++V+GQ+ AKK LSVAVYNHY RI SS ++G
Sbjct: 60 LPKPAEIKKYLDQYVVGQDEAKKSLSVAVYNHYKRI-------------SSNVSEG---- 102
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLI 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
SDY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 163 QNSDYDVEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQI+T +ILFICGGAF ++K IS R Q SS+GFGA V+ V D
Sbjct: 223 GRKHPHQEFIQINTSNILFICGGAFDGLDKIISRRTQKSSMGFGADVQTK----EVKD-- 276
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+L++ + DL+ +GLIPEFVGR P++V+L AL E+ LV +L+EPKNAL KQY+K+F
Sbjct: 277 -IGALLKEIMPGDLLRFGLIPEFVGRLPIIVTLQALDESALVSILSEPKNALVKQYKKLF 335
Query: 565 QMN 567
+M+
Sbjct: 336 EMD 338
>gi|83644979|ref|YP_433414.1| ATP-dependent protease ATP-binding subunit ClpX [Hahella chejuensis
KCTC 2396]
gi|123533762|sp|Q2SK35.1|CLPX_HAHCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83633022|gb|ABC28989.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hahella
chejuensis KCTC 2396]
Length = 427
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 227/309 (73%), Gaps = 23/309 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
S+ ++ PTP EI + LD +VIGQ RAK L+VAVYNHY R+ E + GE
Sbjct: 61 SDSSDRLPTPHEIKETLDDYVIGQTRAKLALAVAVYNHYKRLRYEDKK----GE------ 110
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 111 -------VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 163
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 164 IIQKLLQKCDYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 223
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I +R + SIGF A V++ + +
Sbjct: 224 SVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLEKIIRDRAEKGSIGFSAVVKSQLSSK 283
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
V + ++ VE+ DLI +GLIPEFVGR PV+ +L L E L+Q+LT+P+NAL K
Sbjct: 284 SVGET------LKDVETEDLIKFGLIPEFVGRLPVIATLDELDEAALIQILTQPRNALTK 337
Query: 559 QYRKMFQMN 567
QY K+F+M
Sbjct: 338 QYSKLFEME 346
>gi|146277489|ref|YP_001167648.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17025]
gi|166215195|sp|A4WSH9.1|CLPX_RHOS5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145555730|gb|ABP70343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17025]
Length = 421
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/303 (57%), Positives = 225/303 (74%), Gaps = 25/303 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ AK+VLSVAV+NHY R+ N SS+ +
Sbjct: 64 PTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRL-NHSSK-----------------ND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I++R + S IGFGA V+ D+
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD-------PDSRG 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L +E DL+ +GLIPEFVGR PV+ +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 279 VGELFTELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALVKQYQRLFE 338
Query: 566 MNG 568
+ G
Sbjct: 339 IEG 341
>gi|414343401|ref|YP_006984922.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
oxydans H24]
gi|411028736|gb|AFW01991.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
oxydans H24]
Length = 421
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 228/303 (75%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEICK LD +VIGQ AK+ LSVAV+NHY R+ + QK S
Sbjct: 63 PTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLAH--VQKNS---------------D 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVRSE-------DERR 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++++TVE DL+ +GLIPEF+GR PV+ +L L E+ L+Q+L++PKNAL KQY ++F+
Sbjct: 279 LGAILQTVEPEDLLKFGLIPEFIGRLPVIAALNDLDESALIQILSKPKNALTKQYGRLFE 338
Query: 566 MNG 568
M G
Sbjct: 339 MEG 341
>gi|89900347|ref|YP_522818.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodoferax
ferrireducens T118]
gi|122479496|sp|Q21Y66.1|CLPX_RHOFD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|89345084|gb|ABD69287.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodoferax
ferrireducens T118]
Length = 421
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 222/306 (72%), Gaps = 22/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI LD +VIGQE AK+ L+VAVYNHY R+ ++ K+
Sbjct: 63 SELPTPLEIKTNLDNYVIGQEPAKRTLAVAVYNHYKRLRHQEKAKK-------------- 108
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 -DDVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVLK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 168 LLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D +Q+DT +ILFICGGAF +EK I R Q S +GFGA V++ +
Sbjct: 228 QGGRKHPNQDFVQVDTTNILFICGGAFSGLEKVIDNRTQSSGMGFGATVKSKEQRS---- 283
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ + + VE DLI +GLIPE VGR PVL +L L+E+ LVQ+LTEPKNAL KQY K
Sbjct: 284 ---LTEVFKEVEPEDLIKFGLIPELVGRMPVLATLAELSEDALVQILTEPKNALVKQYSK 340
Query: 563 MFQMNG 568
+ M G
Sbjct: 341 LLAMEG 346
>gi|428211846|ref|YP_007084990.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Oscillatoria
acuminata PCC 6304]
gi|428000227|gb|AFY81070.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Oscillatoria
acuminata PCC 6304]
Length = 446
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 227/305 (74%), Gaps = 15/305 (4%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI K LD+ VIGQ+ AKKVLSVAVYNHY R+ +Q +++G+ +
Sbjct: 77 NQMPKPREIKKHLDEHVIGQDEAKKVLSVAVYNHYKRL--SYTQAKASGKIGA------- 127
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D VEL+KSNILL+GPTG GKTLLA+TLA + VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 128 EDPVELQKSNILLIGPTGCGKTLLAQTLADVLEVPFAVADATTLTEAGYVGEDVENILLR 187
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 188 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 247
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +EK + +R S+GF P A +
Sbjct: 248 QGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRTGKKSMGFIQPGDAQSKEKR--- 304
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T+ +++ ++ DL+ +G+IPEF+GR PVL + L E+ L ++LTEPKNAL KQY+K
Sbjct: 305 ---TADILKNLQPDDLVKFGMIPEFIGRIPVLAVVDPLDEDALTEILTEPKNALVKQYQK 361
Query: 563 MFQMN 567
+ +M+
Sbjct: 362 LLRMD 366
>gi|91977363|ref|YP_570022.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisB5]
gi|123762673|sp|Q135W8.1|CLPX_RHOPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91683819|gb|ABE40121.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisB5]
Length = 424
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|29654073|ref|NP_819765.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
RSA 493]
gi|153209304|ref|ZP_01947339.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii 'MSU Goat Q177']
gi|212212796|ref|YP_002303732.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
CbuG_Q212]
gi|212219037|ref|YP_002305824.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
CbuK_Q154]
gi|46576521|sp|Q83DJ1.1|CLPX_COXBU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066653|sp|B6J8W3.1|CLPX_COXB1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066654|sp|B6J0V9.1|CLPX_COXB2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|29541339|gb|AAO90279.1| ATP-dependent endopeptidase clp ATP-binding subunit [Coxiella
burnetii RSA 493]
gi|120575420|gb|EAX32044.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii 'MSU Goat Q177']
gi|212011206|gb|ACJ18587.1| ATP-dependent endopeptidase clp ATP-binding subunit [Coxiella
burnetii CbuG_Q212]
gi|212013299|gb|ACJ20679.1| ATP-dependent endopeptidase clp ATP-binding subunit [Coxiella
burnetii CbuK_Q154]
Length = 422
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/312 (55%), Positives = 225/312 (72%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG+ K PTP EI + LD++VIGQE AKKVLSVAVYNHY R+ N++ +
Sbjct: 54 GGAQ--KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKK---------- 101
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D+VE+ KSNILL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDV
Sbjct: 102 -------DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDV 154
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y+V A+ GI+YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGT
Sbjct: 155 ENIIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGT 214
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V ++P +G RKHP+ + +Q+DT +ILFICGGAF D+ K I R S IGF A VR
Sbjct: 215 VASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRPKED 274
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ S L++ E DLI YGLIPEFVGR P++ +L L E+ L+++LTEPKNAL
Sbjct: 275 F-----SREASKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNAL 329
Query: 557 GKQYRKMFQMNG 568
KQYRK+F+ G
Sbjct: 330 VKQYRKLFEFEG 341
>gi|350571079|ref|ZP_08939417.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
wadsworthii 9715]
gi|349793446|gb|EGZ47280.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
wadsworthii 9715]
Length = 455
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/325 (54%), Positives = 228/325 (70%), Gaps = 23/325 (7%)
Query: 244 GSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNE 303
GS K G S L NK PTP EI L+ VIGQ++AKK L+VAVYNHY R+ +
Sbjct: 75 GSEAPESGKVGPNKDSGLSNKLPTPAEIVANLNDHVIGQDQAKKALAVAVYNHYKRLRHP 134
Query: 304 SSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADA 363
+++ VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADA
Sbjct: 135 K-----------------ENNNVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADA 177
Query: 364 TTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGE 423
TTLT+AGYVGEDVE I+ KLL D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGE
Sbjct: 178 TTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGE 237
Query: 424 GVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS 483
GVQQALLK++EGTV +VP +G RKHP + IQ+DT +ILFICGGAF +EK I +R +
Sbjct: 238 GVQQALLKLIEGTVASVPPQGGRKHPNQEFIQVDTTNILFICGGAFAGLEKVIRQRTEKG 297
Query: 484 SIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTEN 543
IGFGA V + +T+ L +TVE DLI +GLIPE +GR PV+ +L L E+
Sbjct: 298 GIGFGAAVHSKDDDSKITE------LFQTVEPEDLIKFGLIPELIGRLPVIAALAELDED 351
Query: 544 QLVQVLTEPKNALGKQYRKMFQMNG 568
L+ +LTEPKNAL KQY+ +F+M G
Sbjct: 352 ALINILTEPKNALVKQYQALFEMEG 376
>gi|338974251|ref|ZP_08629613.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Bradyrhizobiaceae bacterium SG-6C]
gi|338232978|gb|EGP08106.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Bradyrhizobiaceae bacterium SG-6C]
Length = 424
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ+ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISGRGRTTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++L EPKNAL KQY++
Sbjct: 282 -----EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|56707750|ref|YP_169646.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670221|ref|YP_666778.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis FSC198]
gi|254370253|ref|ZP_04986259.1| hypothetical protein FTBG_01378 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874563|ref|ZP_05247273.1| ATP-dependent clp protease ATP-binding subunit clpX [Francisella
tularensis subsp. tularensis MA00-2987]
gi|379717000|ref|YP_005305336.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TIGB03]
gi|379725604|ref|YP_005317790.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TI0902]
gi|385794386|ref|YP_005830792.1| ATP-dependent protease ATP-binding subunit [Francisella tularensis
subsp. tularensis NE061598]
gi|421755255|ref|ZP_16192205.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700075]
gi|61211391|sp|Q5NH46.1|CLPX_FRATT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56604242|emb|CAG45258.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320554|emb|CAL08641.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
tularensis FSC198]
gi|151568497|gb|EDN34151.1| hypothetical protein FTBG_01378 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840562|gb|EET18998.1| ATP-dependent clp protease ATP-binding subunit clpX [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158921|gb|ADA78312.1| ATP-dependent protease ATP-binding subunit [Francisella tularensis
subsp. tularensis NE061598]
gi|377827053|gb|AFB80301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TI0902]
gi|377828677|gb|AFB78756.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TIGB03]
gi|409088590|gb|EKM88654.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700075]
Length = 417
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF + V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNSDVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|56478266|ref|YP_159855.1| ATP-dependent protease ATP-binding subunit ClpX [Aromatoleum
aromaticum EbN1]
gi|62286505|sp|Q5P160.1|CLPX_AZOSE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56314309|emb|CAI08954.1| ATP-dependent Clp protease ATP-binding,subunit clpX [Aromatoleum
aromaticum EbN1]
Length = 422
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 221/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EIC+ L+++VIGQ +AK+ LSVAVYNHY R+ + S +K +
Sbjct: 64 LPTPQEICEILNQYVIGQTQAKRNLSVAVYNHYKRLRHLSGRK----------------E 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV ++P +G
Sbjct: 168 QKCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQIDT +ILFICGGAF +EK I R + IGFGA +++ +
Sbjct: 228 GRKHPNQDFIQIDTTNILFICGGAFDGLEKVIRNRTEKIGIGFGAEIKSR-------EGK 280
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S VE DLI +GLIPEFVGR PV+ +L L E L+Q+L EPKNAL KQY+K+F
Sbjct: 281 NVSESFRQVEPEDLIKFGLIPEFVGRLPVVATLQELDEEALIQILVEPKNALVKQYQKLF 340
Query: 565 QMNG 568
M G
Sbjct: 341 SMEG 344
>gi|254462093|ref|ZP_05075509.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium HTCC2083]
gi|206678682|gb|EDZ43169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium HTCC2083]
Length = 377
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + +QK S
Sbjct: 20 PTPKDICQVLDDYVIGQATAKRVLSVAVHNHYKRLNH--AQKNSE--------------- 62
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 63 IELAKSNILLMGPTGCGKTLLAQTLARTLDVPFTMADATTLTEAGYVGEDVENIILKLLQ 122
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 123 ASEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 182
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I+ R + S++GFGA VR N G
Sbjct: 183 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDNDDRG------- 235
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 236 IGEIFTELEPEDLLRFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNALVKQYQRLFE 295
Query: 566 MN 567
+
Sbjct: 296 LE 297
>gi|414166620|ref|ZP_11422852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
clevelandensis ATCC 49720]
gi|410892464|gb|EKS40256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
clevelandensis ATCC 49720]
Length = 424
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ+ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISGRGRTTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++L EPKNAL KQY++
Sbjct: 282 -----EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|225850860|ref|YP_002731094.1| ATP-dependent protease ATP-binding subunit ClpX [Persephonella
marina EX-H1]
gi|225645554|gb|ACO03740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Persephonella
marina EX-H1]
Length = 411
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 221/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI K LD++VIGQERAKK+LSVAVYNHY RI++ DD
Sbjct: 58 LPTPAEIKKKLDEYVIGQERAKKILSVAVYNHYKRIFHPGRYT---------------DD 102
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VELEKSNILL+GPTGSGKTLLA+TLA+ +NVPF IADAT +T+AGYVGEDVESIL +L+
Sbjct: 103 DVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATNITEAGYVGEDVESILVRLV 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+DY++ A++GI+YIDE+DKI KK+ E+ +I+RDVSGEGVQQALLK+LEGTV N+P +
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIAKKSGENPSITRDVSGEGVQQALLKILEGTVANIPPQ 222
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQ+DT +ILFI GGAFV +E I +R SIGF +R+ G
Sbjct: 223 GGRKHPHQEFIQLDTSNILFILGGAFVGLEDIIKQRIGKKSIGFATQIRSKEEEEG---- 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++ V DLI +GLIPEF+GR PV+ +L L E+ LV+VLTEPKNAL KQY+K+
Sbjct: 279 ----NILSKVRVEDLIKFGLIPEFIGRIPVVATLDELDEDALVRVLTEPKNALIKQYKKL 334
Query: 564 FQMNG 568
M+G
Sbjct: 335 LSMDG 339
>gi|161830841|ref|YP_001596949.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
RSA 331]
gi|189044132|sp|A9NDF9.1|CLPX_COXBR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161762708|gb|ABX78350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii RSA 331]
Length = 422
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/312 (55%), Positives = 225/312 (72%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG+ K PTP EI + LD++VIGQE AKKVLSVAVYNHY R+ N++ +
Sbjct: 54 GGAQ--KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKK---------- 101
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D+VE+ KSNILL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDV
Sbjct: 102 -------DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDV 154
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y+V A+ GI+YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGT
Sbjct: 155 ENIIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGT 214
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V ++P +G RKHP+ + +Q+DT +ILFICGGAF D+ K I R S IGF A VR
Sbjct: 215 VASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRPKED 274
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ S L++ E DLI YGLIPEFVGR P++ +L L E+ L+++LTEPKNAL
Sbjct: 275 F-----SREASKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNAL 329
Query: 557 GKQYRKMFQMNG 568
KQYRK+F+ G
Sbjct: 330 VKQYRKLFEFEG 341
>gi|388456733|ref|ZP_10139028.1| ATP-dependent protease ATP-binding subunit ClpX [Fluoribacter
dumoffii Tex-KL]
Length = 424
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 224/305 (73%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P+PKEI LD++VIGQ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPSPKEISTFLDEYVIGQSHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQKCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +EK I ER S IGF A ++ +D
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLEKVIRERSDKSGIGFSAQLKNKKEN---SDE 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ S ++ +ES DLI YGLIPEFVGR PV+ +L L E+ L+ +LT PKNAL KQ++ +
Sbjct: 281 I--SKVLNQLESDDLIKYGLIPEFVGRLPVVATLQELDESALIDILTNPKNALTKQFQSL 338
Query: 564 FQMNG 568
F+M G
Sbjct: 339 FKMEG 343
>gi|383317430|ref|YP_005378272.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Frateuria
aurantia DSM 6220]
gi|379044534|gb|AFC86590.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Frateuria
aurantia DSM 6220]
Length = 430
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/303 (57%), Positives = 222/303 (73%), Gaps = 23/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI LD++V+GQ RAKK L+VAVYNHY RI ES QK D
Sbjct: 66 LPKPREIMDALDQYVVGQTRAKKSLAVAVYNHYKRI--ESRQK---------------SD 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QKCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DTK+ILFI GGAF ++K I +R + + IGF A VR+ R +
Sbjct: 229 GRKHPQQEFLQVDTKNILFIVGGAFAGLDKVIQQRAETTGIGFSAEVRSKERTTNL---- 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L+ VE DL+ YGLIPEFVGR PV+ +L L E LV++LTEPKNA+ KQ++++F
Sbjct: 285 --GRLLADVEPGDLVRYGLIPEFVGRLPVIATLDELDEAALVKILTEPKNAVTKQFKRLF 342
Query: 565 QMN 567
+M
Sbjct: 343 EME 345
>gi|444375829|ref|ZP_21175081.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterovibrio
sp. AK16]
gi|443680057|gb|ELT86705.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterovibrio
sp. AK16]
Length = 426
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ PTP+EI LD +VIGQ+RAKKVLSVAVYNHY R+ N T DGV
Sbjct: 63 NELPTPQEIRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRN-----------GDTTADGV- 110
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 ----ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+VA A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVAKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTIASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K + +R + S IGFGA VR + ++
Sbjct: 227 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVDQRVAKGSGIGFGAEVRTKDQEATLS 286
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D L VE DL+ YGLIPEF+GR PV L L E+ LVQ+L EPKNAL KQY
Sbjct: 287 D------LFSKVEPEDLVKYGLIPEFIGRLPVTAILGELDEDALVQILREPKNALTKQYA 340
Query: 562 KMFQMNG 568
+ +++G
Sbjct: 341 ALLELDG 347
>gi|428307442|ref|YP_007144267.1| ATP-dependent Clp protease ATP-binding subunit clpX [Crinalium
epipsammum PCC 9333]
gi|428248977|gb|AFZ14757.1| ATP-dependent Clp protease ATP-binding subunit clpX [Crinalium
epipsammum PCC 9333]
Length = 445
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 225/305 (73%), Gaps = 15/305 (4%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P+E+ K LD+ VIGQ+ AKKVLSVAVYNHY R+ Q +++G+ +
Sbjct: 76 SQIPKPRELKKFLDEHVIGQQEAKKVLSVAVYNHYKRL--SFIQSKNSGKPGA------- 126
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD V+L+KSNILLMGPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 127 DDAVDLQKSNILLMGPTGCGKTLLAQTLASILDVPFAVADATTLTEAGYVGEDVENILLR 186
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D++V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 187 LLQVADFDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 246
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +I+FICGGAFV +EK + +R SIGF P R D
Sbjct: 247 QGGRKHPYQDCIQIDTSNIMFICGGAFVGLEKVVEQRMGKKSIGFIQPGEGQPREKRAAD 306
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ +E DL+ +GLIPEF+GR PV+ + L E L+++LTEP+NAL KQY+K
Sbjct: 307 ------ILRHMEPDDLVKFGLIPEFIGRIPVVAVVDPLDEEALMEILTEPRNALAKQYQK 360
Query: 563 MFQMN 567
+ +M+
Sbjct: 361 LLKMD 365
>gi|148259929|ref|YP_001234056.1| ATP-dependent protease ATP-binding subunit ClpX [Acidiphilium
cryptum JF-5]
gi|326403117|ref|YP_004283198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acidiphilium
multivorum AIU301]
gi|254763827|sp|A5FX05.1|CLPX_ACICJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146401610|gb|ABQ30137.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidiphilium
cryptum JF-5]
gi|325049978|dbj|BAJ80316.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acidiphilium
multivorum AIU301]
Length = 418
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 229/303 (75%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ+ AK++LSVAV+NHY R+ + +QK ++
Sbjct: 63 PTPREICKVLDDYVIGQDHAKRILSVAVHNHYKRLAH--AQK---------------NND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+E+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I++R + S IGFGA VR
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQR------- 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY ++F+
Sbjct: 279 TGAILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLFE 338
Query: 566 MNG 568
M G
Sbjct: 339 MEG 341
>gi|388257268|ref|ZP_10134447.1| ATP-dependent protease ATP-binding subunit ClpX [Cellvibrio sp. BR]
gi|387938435|gb|EIK44987.1| ATP-dependent protease ATP-binding subunit ClpX [Cellvibrio sp. BR]
Length = 433
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 229/310 (73%), Gaps = 23/310 (7%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
+ K P P EI LD++VIGQ+RAKKVL+VAVYNHY R+ G+ + G
Sbjct: 63 VSEKLPKPHEISAILDQYVIGQKRAKKVLAVAVYNHYKRL--------RFGDKA-----G 109
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D + +EL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+
Sbjct: 110 KDKEPIELGKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENII 169
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +V
Sbjct: 170 QKLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASV 229
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAG 498
P +G RKHP+ + +Q+DT +ILFICGGAF ++K I +R + S IGFGA V++ R
Sbjct: 230 PPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKSGIGFGAEVKSKDEKRNF 289
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
G T + ++E DL+ YGLIPEFVGR PV+ +L L + L+Q+LTEP+NAL K
Sbjct: 290 GET--------LHSLEPEDLVRYGLIPEFVGRLPVIATLDELDKAALIQILTEPRNALTK 341
Query: 559 QYRKMFQMNG 568
QY ++F+M G
Sbjct: 342 QYARLFEMEG 351
>gi|316933822|ref|YP_004108804.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris DX-1]
gi|315601536|gb|ADU44071.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris DX-1]
Length = 424
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|379012039|ref|YP_005269851.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacterium
woodii DSM 1030]
gi|375302828|gb|AFA48962.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacterium
woodii DSM 1030]
Length = 423
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/306 (56%), Positives = 222/306 (72%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P PKEI K L ++VI Q AK+ LSVAVYNHY RI T+ +
Sbjct: 58 DDVPKPKEIKKKLSEYVIAQNHAKRALSVAVYNHYKRI----------------TSMDEN 101
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL K
Sbjct: 102 DPEVELQKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATSLTEAGYVGEDVENILLK 161
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL ++++VA A++GI+YIDE+DKI +K ++ +I+RDVSGEGVQQALLK+LEGTV NVP
Sbjct: 162 LLQAANFDVAKAEKGIIYIDEIDKIARKGDNPSITRDVSGEGVQQALLKILEGTVANVPP 221
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQI+T ++LFICGGAF ++K I +R SS+GFGA VR N +
Sbjct: 222 QGGRKHPHQDFIQINTNNVLFICGGAFDGMDKLIEQRTDKSSMGFGAEVRNNKKE----- 276
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ + +V+ DL+ YGLIPEF+GR PV+ SL L E L+Q+LTEP+NAL KQY K
Sbjct: 277 --TEDNTLNSVQPQDLLKYGLIPEFIGRIPVIASLEHLDEEALIQILTEPRNALVKQYIK 334
Query: 563 MFQMNG 568
MF++ G
Sbjct: 335 MFKIEG 340
>gi|344199552|ref|YP_004783878.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Acidithiobacillus ferrivorans SS3]
gi|343774996|gb|AEM47552.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Acidithiobacillus ferrivorans SS3]
Length = 423
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/318 (57%), Positives = 230/318 (72%), Gaps = 24/318 (7%)
Query: 252 KDGCWGGSNLGN-KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
KD G + G K P P EI K LD +VIGQ+ AKKVLSVAVYNHY R+
Sbjct: 49 KDEILDGHSEGQEKLPKPMEIRKTLDDYVIGQDAAKKVLSVAVYNHYKRLEY-------- 100
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
G D+ VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AG
Sbjct: 101 ---------GGKDNEVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAG 151
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+I+ KLL DY+V AQ GIVYIDE+DKIT+K+E+ +I+RDVSGEGVQQALL
Sbjct: 152 YVGEDVENIIQKLLQKCDYDVEKAQTGIVYIDEIDKITRKSENPSITRDVSGEGVQQALL 211
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K++EGTV +VP +G RKHP+ + +Q+DT+ ILFICGGAF +EK++S R + +GF AP
Sbjct: 212 KLIEGTVASVPPQGGRKHPQQEFLQVDTRHILFICGGAFAGLEKSVSARLEKGGMGFNAP 271
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
++ +R G T A+ LM+ +E DL+ YGLIPEFVGR P+L L L E LV +LT
Sbjct: 272 LK--LRDKGATAAL----LMQNLEPEDLVRYGLIPEFVGRLPILALLEELDEEALVSILT 325
Query: 551 EPKNALGKQYRKMFQMNG 568
EPKNAL KQY+K+F + G
Sbjct: 326 EPKNALVKQYQKLFALEG 343
>gi|74317694|ref|YP_315434.1| ATP-dependent protease ATP-binding subunit ClpX [Thiobacillus
denitrificans ATCC 25259]
gi|123772958|sp|Q3SI99.1|CLPX_THIDA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|74057189|gb|AAZ97629.1| ClpX, ATPase regulatory subunit [Thiobacillus denitrificans ATCC
25259]
Length = 423
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/304 (59%), Positives = 221/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD++VIGQ +AKK L+VAVYNHY R+ SSS + D
Sbjct: 63 LPTPHEISGILDQYVIGQGQAKKALAVAVYNHYKRL-----------RSSSGSGD----- 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 -VELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V A+QGIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 166 QKCDYDVDKAKQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTTASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + +Q+DT +ILFICGGAF +EK I R + IGFGA V+ V +
Sbjct: 226 GRKHPNQEFVQVDTSNILFICGGAFSGLEKVIRGRTEKGGIGFGAQVK------NVDENK 279
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ L+ VE DLI YGLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQ+ K+F
Sbjct: 280 RDAELLHQVEPEDLIKYGLIPEFVGRLPVVATLDELDEAALVQILTEPKNALTKQFAKLF 339
Query: 565 QMNG 568
+M G
Sbjct: 340 KMEG 343
>gi|115314707|ref|YP_763430.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica OSU18]
gi|115129606|gb|ABI82793.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
Length = 417
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL++SN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKRSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTKAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNADVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|398353147|ref|YP_006398611.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii USDA 257]
gi|390128473|gb|AFL51854.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii USDA 257]
Length = 425
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 230/304 (75%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD++VIGQ++AK++LSVAV+NHY R+ + A +SS
Sbjct: 67 PTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAH-------AAKSSD---------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA VRA + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|150396096|ref|YP_001326563.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
medicae WSM419]
gi|166215207|sp|A6U7U8.1|CLPX_SINMW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150027611|gb|ABR59728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sinorhizobium
medicae WSM419]
Length = 425
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 230/304 (75%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD++VIGQ++AK++LSVAV+NHY R+ + A +SS
Sbjct: 67 PTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAH-------AAKSSD---------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA VRA + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|84387736|ref|ZP_00990752.1| ATP-dependent protease ATP-binding subunit [Vibrio splendidus
12B01]
gi|84377419|gb|EAP94286.1| ATP-dependent protease ATP-binding subunit [Vibrio splendidus
12B01]
Length = 426
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/304 (58%), Positives = 222/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD +VIGQE AKKVL+VAVYNHY R+ N T +GV
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRN-----------GDTTAEGV--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + SSIGFGA VR+ A V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRVEKGSSIGFGAEVRSKDEAKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E LVQ+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALVQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FEIE 346
>gi|381197076|ref|ZP_09904417.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
lwoffii WJ10621]
Length = 436
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 225/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ K + G
Sbjct: 53 GDWAAKPL----PKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL------KATHGGH 102
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
DD VE+ KSNILL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVG
Sbjct: 103 KH-------DDAVEIAKSNILLVGPTGSGKTLLAQTMARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKK 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
++D L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 276 KDEGKKLSD------LFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 330 NALTRQYQHLFDME 343
>gi|329894938|ref|ZP_08270737.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC3088]
gi|328922667|gb|EGG30002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC3088]
Length = 430
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 224/306 (73%), Gaps = 22/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P PKEI LD++VIGQ+RAKKVLSVAVYNHY R+ + G+SSS
Sbjct: 65 DKLPVPKEINAILDEYVIGQQRAKKVLSVAVYNHYKRLRH--------GQSSS------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 -DAVELGKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQK 168
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 169 LLQKCDYDVEKAQVGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 228
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF ++K I+ R IGF A V+ G
Sbjct: 229 QGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVITNRSAKGGIGFNAEVK------GKEQ 282
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ +E DL+ YGLIPEFVGR PV+ +L L LVQ+LTEPKNAL KQY++
Sbjct: 283 KKEFGEILFDLEPEDLVHYGLIPEFVGRLPVIATLEELDVEALVQILTEPKNALTKQYKR 342
Query: 563 MFQMNG 568
+F+M G
Sbjct: 343 LFEMEG 348
>gi|15965009|ref|NP_385362.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti 1021]
gi|334315799|ref|YP_004548418.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti AK83]
gi|384528968|ref|YP_005713056.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti BL225C]
gi|384536771|ref|YP_005720856.1| ATP-dependent protease ATP-binding subunit [Sinorhizobium meliloti
SM11]
gi|407720200|ref|YP_006839862.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
meliloti Rm41]
gi|418402635|ref|ZP_12976143.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti CCNWSX0020]
gi|433613030|ref|YP_007189828.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Sinorhizobium meliloti GR4]
gi|21263475|sp|Q92QQ2.1|CLPX_RHIME RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15074188|emb|CAC45835.1| Probable ATP-dependent CLP protease ATP-binding subunit
[Sinorhizobium meliloti 1021]
gi|333811144|gb|AEG03813.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti BL225C]
gi|334094793|gb|AEG52804.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti AK83]
gi|336033663|gb|AEH79595.1| ATP-dependent protease ATP-binding subunit [Sinorhizobium meliloti
SM11]
gi|359503376|gb|EHK75930.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti CCNWSX0020]
gi|407318432|emb|CCM67036.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
meliloti Rm41]
gi|429551220|gb|AGA06229.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Sinorhizobium meliloti GR4]
Length = 425
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 230/304 (75%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD++VIGQ++AK++LSVAV+NHY R+ + A +SS
Sbjct: 67 PTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAH-------AAKSSD---------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA VRA + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|387824405|ref|YP_005823876.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida 3523]
gi|328676004|gb|AEB28679.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida 3523]
Length = 417
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNPTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT +ILFICGGAF IEK + R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTTNILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ T LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDTDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|299135042|ref|ZP_07028233.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Afipia sp.
1NLS2]
gi|298590019|gb|EFI50223.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Afipia sp.
1NLS2]
Length = 424
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAASVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++L EPKNAL KQY++
Sbjct: 282 -----EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|262369922|ref|ZP_06063249.1| ATP-dependent protease Clp [Acinetobacter johnsonii SH046]
gi|262314961|gb|EEY96001.1| ATP-dependent protease Clp [Acinetobacter johnsonii SH046]
Length = 438
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 225/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ K + G
Sbjct: 55 GDWAAKPL----PKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL------KATHGGH 104
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
DD VE+ KSNILL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVG
Sbjct: 105 KH-------DDAVEIAKSNILLVGPTGSGKTLLAQTMARLLDVPFAMADATTLTEAGYVG 157
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 158 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 217
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 218 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKK 277
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
++D L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 278 KDEGKKLSD------LFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 331
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 332 NALTRQYQHLFDME 345
>gi|414162391|ref|ZP_11418638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia felis
ATCC 53690]
gi|410880171|gb|EKS28011.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia felis
ATCC 53690]
Length = 424
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAASVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++L EPKNAL KQY++
Sbjct: 282 -----EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|442771952|gb|AGC72624.1| ATP-dependent Clp protease ATP-binding subunit ClpX [uncultured
bacterium A1Q1_fos_1134]
Length = 421
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/312 (55%), Positives = 219/312 (70%), Gaps = 22/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G PTP EI LD +VIGQE AK+ L+VAVYNHY R+ ++
Sbjct: 57 AGREAKTDLPTPSEIKANLDNYVIGQEAAKRTLAVAVYNHYKRLRHK------------- 103
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDV
Sbjct: 104 --DKAAKDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIIQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 222 MASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQ 281
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
S + + +E DLI +GLIPE VGR PV+ +L L E+ LVQ+LTEPKNAL
Sbjct: 282 RS-------LSEVFQEIEPEDLIKFGLIPELVGRMPVVAALAELGEDALVQILTEPKNAL 334
Query: 557 GKQYRKMFQMNG 568
KQY K+ M G
Sbjct: 335 VKQYNKLLAMEG 346
>gi|114321436|ref|YP_743119.1| ATP-dependent protease ATP-binding subunit ClpX [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311053|sp|Q0A6A8.1|CLPX_ALHEH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114227830|gb|ABI57629.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alkalilimnicola ehrlichii MLHE-1]
Length = 425
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/310 (56%), Positives = 222/310 (71%), Gaps = 23/310 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
S+ G P P EI + LD+FV+GQE AKKVLSVAVYNHY R+ S +
Sbjct: 59 SSAGAGLPRPHEINQVLDEFVVGQEHAKKVLSVAVYNHYKRLEAGSRK------------ 106
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 107 -----DEVELSKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVEN 161
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL DY+V AQQGIVYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 IIQKLLQKCDYDVEKAQQGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGTTA 221
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGF A +++
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTGGILFICGGAFAGLDKVIQDRSEKGGIGFSAEIKSKDEKR 281
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
V + ++ VE DL+ YGLIPEFVGR PV+ +L L E LV++L+ PKNAL K
Sbjct: 282 SVGET------LQDVEPEDLVKYGLIPEFVGRLPVVATLEELDEQALVEILSAPKNALVK 335
Query: 559 QYRKMFQMNG 568
QY+K+F+M G
Sbjct: 336 QYQKLFEMEG 345
>gi|372270958|ref|ZP_09507006.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacterium
stanieri S30]
Length = 424
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 224/304 (73%), Gaps = 25/304 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQERAK+VL+VAVYNHY R+ QK+
Sbjct: 66 LPTPAEIKETLDDYVIGQERAKRVLAVAVYNHYKRL---RFQKKG--------------- 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 QKCDYDVEKAQLGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF +EK I +R + SSIGF A V++ D
Sbjct: 228 GRKHPQQEFLQVDTSNILFICGGAFAGLEKLIRDRSERSSIGFSAVVKSK-------DES 280
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S ++ VE+ DL+ +GLIPEFVGR P++ +L L E+ L+Q+LTEPKN+L KQY +F
Sbjct: 281 RLSEVLHDVEAEDLVKFGLIPEFVGRLPMVATLSELDEDALIQILTEPKNSLVKQYNALF 340
Query: 565 QMNG 568
+M G
Sbjct: 341 EMEG 344
>gi|171059224|ref|YP_001791573.1| ATP-dependent protease ATP-binding subunit ClpX [Leptothrix
cholodnii SP-6]
gi|238689116|sp|B1Y6H2.1|CLPX_LEPCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|170776669|gb|ACB34808.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Leptothrix
cholodnii SP-6]
Length = 424
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/312 (56%), Positives = 225/312 (72%), Gaps = 21/312 (6%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG + P P EI LD++VIGQ+ AK+ LSVAVYNHY R+ + + + +
Sbjct: 58 GGKTSRSDLPVPSEIKTLLDQYVIGQDAAKRTLSVAVYNHYKRLKHMADKGKG------- 110
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDV
Sbjct: 111 -------EEVELAKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDV 163
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 164 ENIIQKLLQNCNYEVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGT 223
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +QIDT +ILFICGGAF +EK I+ R + S IGFGA V++
Sbjct: 224 MASVPPQGGRKHPNQDFLQIDTTNILFICGGAFDGLEKVIANRSEKSGIGFGATVKSKAE 283
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
S + +E DLI +G+IPE VGR PV+ +L LTE+ LVQ+LTEPKNAL
Sbjct: 284 RS-------VSEVFRQIEPEDLIKFGIIPELVGRLPVIATLGELTEDALVQILTEPKNAL 336
Query: 557 GKQYRKMFQMNG 568
KQY+++F M+G
Sbjct: 337 LKQYQRLFGMDG 348
>gi|397676239|ref|YP_006517777.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395396928|gb|AFN56255.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zymomonas
mobilis subsp. mobilis ATCC 29191]
Length = 422
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD++VIGQ +AK+VLSVAV+NHY R+ + G D
Sbjct: 64 PTPQEICTILDQYVIGQSKAKRVLSVAVHNHYKRLNH-----------------GGKDAD 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + SIGFGA V A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAA-------PDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ E DL+ +GLIPEFVGR PVL +L L ++ LV++LTEPKNAL KQY+K+F+
Sbjct: 280 TGEILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDQSALVRILTEPKNALVKQYQKLFE 339
Query: 566 MN 567
+
Sbjct: 340 LE 341
>gi|163759317|ref|ZP_02166403.1| ATP-dependent Clp protease, ATP-binding subunit protein [Hoeflea
phototrophica DFL-43]
gi|162283721|gb|EDQ34006.1| ATP-dependent Clp protease, ATP-binding subunit protein [Hoeflea
phototrophica DFL-43]
Length = 426
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 228/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD++VIGQ +AKK+LSVAV+NHY R+ N SS+ +GE
Sbjct: 67 PTPQEIIATLDEYVIGQHQAKKILSVAVHNHYKRL-NHSSK---SGE------------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILF+CGGAF ++K IS+R + +SIGF A VRA D
Sbjct: 230 RKHPQQEFLQVDTTNILFVCGGAFAGLDKIISDRGEKTSIGFSASVRAQ-------DERR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+LTEPKNAL KQY+++F+
Sbjct: 283 VGEVLRALEPEDLVKFGLIPEFIGRLPVLATLEDLDESALIQILTEPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|384083496|ref|ZP_09994671.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium HIMB30]
Length = 430
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 223/304 (73%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+ I LD +VIGQ+RAK+VL+VAVYNHY R+ + +R
Sbjct: 67 LPVPQVIKTTLDDYVIGQDRAKRVLAVAVYNHYKRLRHGERGERD--------------- 111
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 -VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLL 170
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 171 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 230
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF ++K I +R + IGFGA VR+ + V +A
Sbjct: 231 GRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFGAEVRSKDESKSVGEAF 290
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
VE DL+ YGLIPEFVGR PV+ +L L E+ L+Q+L+EPKNAL KQY+++F
Sbjct: 291 A------EVEPEDLVKYGLIPEFVGRLPVVATLGELDEDALIQILSEPKNALVKQYKELF 344
Query: 565 QMNG 568
+M G
Sbjct: 345 EMEG 348
>gi|269102130|ref|ZP_06154827.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162028|gb|EEZ40524.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 392
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/308 (57%), Positives = 229/308 (74%), Gaps = 23/308 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G++ PTP+EI LD +VIGQE AKKVL+VAVYNHY R+ N G+++S
Sbjct: 28 GSELPTPQEIRHNLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDTNS------ 73
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 74 --DGVELGKSNILLIGPTGSGKTLLAETLARMLDVPFTMADATTLTEAGYVGEDVENIIQ 131
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+VA A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 132 KLLQKCDYDVAKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 191
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGV 500
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R ++ IGFGA VR+ + +
Sbjct: 192 PQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATNTGIGFGAEVRSKDESRTL 251
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
TD L VE DL+ +GLIPEF+GR PV +L L E+ LVQ+L EPKNAL KQY
Sbjct: 252 TD------LFLQVEPEDLVKFGLIPEFIGRLPVTATLTELDEDALVQILREPKNALTKQY 305
Query: 561 RKMFQMNG 568
+F++ G
Sbjct: 306 GALFELEG 313
>gi|90423894|ref|YP_532264.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisB18]
gi|115524518|ref|YP_781429.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisA53]
gi|122296221|sp|Q07NN5.1|CLPX_RHOP5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122476340|sp|Q215J1.1|CLPX_RHOPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|90105908|gb|ABD87945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisB18]
gi|115518465|gb|ABJ06449.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisA53]
Length = 424
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|416228845|ref|ZP_11627777.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 46P47B1]
gi|326563260|gb|EGE13527.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 46P47B1]
Length = 438
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/308 (56%), Positives = 218/308 (70%), Gaps = 21/308 (6%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L P PKE+ LD +VIGQ+ AKK L+VAVYNHY R+ D
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRL--------------KVANDK 127
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VEL KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 128 KDTDGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIV 187
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL SDY+V A+QGI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV N+
Sbjct: 188 QKLLQASDYDVQKAEQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANI 247
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHPR + IQ+DT +IL I GGAF ++K I +R + + IGF A V+A
Sbjct: 248 PPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQ------ 301
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D + L VE+ DLI +GLIPE +GR PV+ SL L E LVQ+LTEPKNAL KQY
Sbjct: 302 -DESSITELFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQY 360
Query: 561 RKMFQMNG 568
+ +F M G
Sbjct: 361 QYLFDMEG 368
>gi|254463915|ref|ZP_05077326.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium Y4I]
gi|206684823|gb|EDZ45305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium Y4I]
Length = 422
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 224/302 (74%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 64 PTPKDICQVLDDYVIGQATAKRVLSVAVHNHYKRL----NHAQKAGSD------------ 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + S++GFGA VR N G
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGKGSAMGFGADVRDNDERG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PVL +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 281 VGEVFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALVTILTEPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|82703456|ref|YP_413022.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosospira
multiformis ATCC 25196]
gi|123543991|sp|Q2Y6J1.1|CLPX_NITMU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|82411521|gb|ABB75630.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosospira
multiformis ATCC 25196]
Length = 425
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 226/306 (73%), Gaps = 24/306 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI + LD++VIGQE+AKK+LSVAVYNHY R+ R+ +S+ D D
Sbjct: 63 LPVPHEIRQILDQYVIGQEQAKKILSVAVYNHYKRL-------RTLAKSA-------DPD 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EIELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+ AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCNYDAEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP + +Q+DT +ILFICGGAF +EK I R + IGF A VR+ N + G
Sbjct: 229 GRKHPNQEFVQVDTTNILFICGGAFDGLEKIIRARSEKGGIGFSASVRSQDNRKDFG--- 285
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+++ VE DL+ YGLIPEFVGR PV+ +L L E L+Q+LTEP+NAL KQY+K
Sbjct: 286 -----AVLRGVEPEDLVKYGLIPEFVGRLPVVATLEELDEAALIQILTEPRNALIKQYQK 340
Query: 563 MFQMNG 568
MF M G
Sbjct: 341 MFHMEG 346
>gi|410727501|ref|ZP_11365718.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. Maddingley MBC34-26]
gi|410598747|gb|EKQ53314.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. Maddingley MBC34-26]
Length = 429
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P EI + LD +VIGQERAKK L+VAVYNHY RI +D
Sbjct: 61 PKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRINTNK-----------------EDID 103
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + IQI+T +ILFICGGAF ++K I R + SS+GFGA ++A
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAKIQAKNEKD------- 276
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
SL++ + +DL+ +GLIPEFVGR P+LV+L +L ++ L+Q+LT+PKNAL KQY+K+F+
Sbjct: 277 VGSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDKDALIQILTKPKNALVKQYKKLFE 336
Query: 566 MN 567
++
Sbjct: 337 LD 338
>gi|407775743|ref|ZP_11123035.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
profundimaris WP0211]
gi|407281104|gb|EKF06668.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
profundimaris WP0211]
Length = 421
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 225/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EICK LD +VIGQ AKKVLSVAV+NHY R+++ S ++
Sbjct: 64 PSPQEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLHHSSK-----------------NED 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNI+L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFI GGAF ++K IS+R + S+IGFGA VR RAG V
Sbjct: 227 RKHPQQEFLQVDTTNILFIVGGAFAGLDKVISQRGRGSAIGFGADVRGPDERRAGDV--- 283
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ VE DL+ +GLIPEF+GR PVL +L L LVQ+LTEPKNAL KQY+++
Sbjct: 284 ------LREVEPEDLLKFGLIPEFIGRLPVLATLEDLDNEALVQILTEPKNALIKQYQRL 337
Query: 564 FQMN 567
F M
Sbjct: 338 FDME 341
>gi|269792563|ref|YP_003317467.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100198|gb|ACZ19185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 429
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 228/323 (70%), Gaps = 27/323 (8%)
Query: 245 SGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNES 304
+G G G+K G ++ P P E+ LD++VIGQ++AKKVLSVAVYNHY RI
Sbjct: 57 AGQGIGAKPSLSGL----DQVPRPDEMKAFLDQYVIGQDQAKKVLSVAVYNHYRRI---- 108
Query: 305 SQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADAT 364
T G DD VEL KSN+LL+GPTGSGKTLLA+TLAR + VPF IADAT
Sbjct: 109 -------------TAGPSDDQVELPKSNVLLVGPTGSGKTLLAQTLARLLKVPFAIADAT 155
Query: 365 TLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEG 424
TLT+AGYVGEDVE+IL +LL +DY+V AA++GI+YIDE+DKI++K+ES +I+RDVSGEG
Sbjct: 156 TLTEAGYVGEDVENILVRLLQAADYDVKAAERGIIYIDEIDKISRKSESPSITRDVSGEG 215
Query: 425 VQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS 484
VQQALL++LEGTV NVP KG RKHP D IQ+DTK+ILFICGGAF +E I+ R +
Sbjct: 216 VQQALLRILEGTVSNVPPKGGRKHPNQDFIQVDTKNILFICGGAFDGLEPIIARRTRKKV 275
Query: 485 IGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQ 544
IGFG + D +SL + + D I YG IPEFVGR PV+V L +L E
Sbjct: 276 IGFGGDI------ASAKDLEKRNSLYRELVADDFITYGFIPEFVGRLPVIVPLDSLDEEA 329
Query: 545 LVQVLTEPKNALGKQYRKMFQMN 567
LV++L EPKNAL +QY+++F+M+
Sbjct: 330 LVRILQEPKNALVRQYQRIFEMD 352
>gi|225573067|ref|ZP_03781822.1| hypothetical protein RUMHYD_01258 [Blautia hydrogenotrophica DSM
10507]
gi|225039573|gb|EEG49819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Blautia
hydrogenotrophica DSM 10507]
Length = 432
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 219/302 (72%), Gaps = 25/302 (8%)
Query: 267 TPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTV 326
TP+EI LD++VIGQ+ AKK LSVAVYNHY R+ S V
Sbjct: 66 TPQEIHNFLDEYVIGQDEAKKALSVAVYNHYKRVMAPKSL------------------DV 107
Query: 327 ELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 386
EL+KSNIL++GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL K++
Sbjct: 108 ELQKSNILMLGPTGSGKTLLAQTLAKLLNVPFAIADATTLTEAGYVGEDVENILLKIIQA 167
Query: 387 SDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGAR 446
+DY++ AQ GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G R
Sbjct: 168 ADYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKILEGTVASVPPQGGR 227
Query: 447 KHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVT 506
KHP + IQIDT +ILFICGGAF +EK I+ R+ SIGFGA VR+
Sbjct: 228 KHPHQEFIQIDTTNILFICGGAFEGLEKIIATRKDQKSIGFGADVRSAKEHN-------V 280
Query: 507 SSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQM 566
L+ V D I +GLIPEF+GR PV+VSL AL E L+++L EPKN+L KQYRK+F++
Sbjct: 281 GELLREVMPEDFIKFGLIPEFIGRVPVVVSLNALDEEALIRILQEPKNSLVKQYRKLFEL 340
Query: 567 NG 568
+G
Sbjct: 341 DG 342
>gi|374262730|ref|ZP_09621293.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
drancourtii LLAP12]
gi|363536954|gb|EHL30385.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
drancourtii LLAP12]
Length = 396
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/303 (57%), Positives = 225/303 (74%), Gaps = 23/303 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P+PKEI K LD++VIGQ AKKVLSVAVYNHY R+ ++S +
Sbjct: 35 RLPSPKEISKFLDEYVIGQPHAKKVLSVAVYNHYKRLQHKS------------------E 76
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 77 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 136
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 137 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 196
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER + SSIGF A ++ ++
Sbjct: 197 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSEKSSIGFSAQLKNKK-----DNS 251
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S ++ +ES DLI YGLIPEFVGR PV+ +L L + L+ +LT PKNAL KQ++ +
Sbjct: 252 EEISKVLSRLESDDLIKYGLIPEFVGRLPVVTTLQELDQGALIDILTNPKNALTKQFQSL 311
Query: 564 FQM 566
F+M
Sbjct: 312 FKM 314
>gi|20807120|ref|NP_622291.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
tengcongensis MB4]
gi|254479267|ref|ZP_05092610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydibrachium pacificum DSM 12653]
gi|23813862|sp|Q8RC24.1|CLPX_THETN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|20515614|gb|AAM23895.1| ATP-dependent protease Clp, ATPase subunit [Thermoanaerobacter
tengcongensis MB4]
gi|214034805|gb|EEB75536.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydibrachium pacificum DSM 12653]
Length = 425
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 224/304 (73%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI LD++VIGQ+RAKK L+VAVYNHY RI ++ V D
Sbjct: 60 LPKPKEIKAFLDQYVIGQDRAKKALAVAVYNHYKRINSK-----------------VKSD 102
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATTLTEAGYVGEDVENILLRLI 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 163 QAADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILFICGGAF I+K I R S+GFGA V++
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIDKIIESRIGKKSLGFGAEVQSKKEKD------ 276
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+++ + DL+ +G+IPEF+GR P++V+L LT++ LV++LTEPKNAL KQY K+F
Sbjct: 277 -VGEILKHIMPEDLLKFGMIPEFIGRVPIVVTLDPLTKDDLVRILTEPKNALVKQYEKLF 335
Query: 565 QMNG 568
+M+G
Sbjct: 336 EMDG 339
>gi|134302068|ref|YP_001122037.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis WY96-3418]
gi|421751882|ref|ZP_16188919.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis AS_713]
gi|421753737|ref|ZP_16190726.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 831]
gi|421757463|ref|ZP_16194343.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700103]
gi|421759320|ref|ZP_16196153.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70102010]
gi|424674638|ref|ZP_18111554.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70001275]
gi|134049845|gb|ABO46916.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis WY96-3418]
gi|409086419|gb|EKM86538.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 831]
gi|409086609|gb|EKM86725.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis AS_713]
gi|409091046|gb|EKM91051.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70102010]
gi|409092551|gb|EKM92522.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700103]
gi|417434682|gb|EKT89624.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70001275]
Length = 417
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 218/304 (71%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TL + +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLVKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNADVIQQ------KNS 272
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 273 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 332
Query: 564 FQMN 567
F+ +
Sbjct: 333 FKFD 336
>gi|84499431|ref|ZP_00997719.1| ATP-dependent protease ATP-binding subunit [Oceanicola batsensis
HTCC2597]
gi|84392575|gb|EAQ04786.1| ATP-dependent protease ATP-binding subunit [Oceanicola batsensis
HTCC2597]
Length = 422
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 227/302 (75%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ+ AK+VLSVAV+NHY R+ + + +S G+
Sbjct: 64 PTPQEICDVLDDYVIGQKIAKRVLSVAVHNHYKRLNHAA---KSGGD------------- 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 SSEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + S++GFGA VR N G
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDNDERG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PVL +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 281 VGEVFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALVTILTEPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|62260894|gb|AAX77944.1| unknown protein [synthetic construct]
Length = 452
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 219/305 (71%), Gaps = 22/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 81 KLPKPVEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRI----------------TSNLTKD 124
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 125 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 184
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 185 LQNADFDVAKAQKGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKLIEGTVSSVPPK 244
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK I R SIGF + V ++
Sbjct: 245 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVIKHRMDKVSIGFNSDVIQQ------KNS 298
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + LM+ +ES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 299 LDSDKLMQKIESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVRILTEPKNALIKQYIKL 358
Query: 564 FQMNG 568
F+ +
Sbjct: 359 FKFDN 363
>gi|451818369|ref|YP_007454570.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784348|gb|AGF55316.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 429
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P EI + LD +VIGQERAKK L+VAVYNHY RI +
Sbjct: 61 PKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRINTNKEEM-----------------D 103
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + IQI+T +ILFICGGAF ++K I +R + SS+GFGA ++A
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIEKRTRKSSMGFGAEIQAKHEKD------- 276
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
SL++ + +DL+ +GLIPEFVGR P+LV+L +L L+Q+LT+PKNAL KQY+K+F+
Sbjct: 277 VGSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDREALIQILTKPKNALVKQYKKLFE 336
Query: 566 MN 567
M+
Sbjct: 337 MD 338
>gi|407768975|ref|ZP_11116352.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287895|gb|EKF13374.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 421
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 228/304 (75%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EICK LD +VIGQ AKKVLSVAV+NHY R+++ S ++
Sbjct: 64 PSPQEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLHHASK-----------------NED 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNI+L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFI GGAF ++K IS+R + S+IGFGA VR+ + R G V
Sbjct: 227 RKHPQQEFLQVDTTNILFIVGGAFAGLDKVISQRGKGSAIGFGADVRSPEDRRTGEV--- 283
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ VE DL+ +GLIPEF+GR PVL +L L E+ LV++LTEPKNAL KQY+++
Sbjct: 284 ------LREVEPEDLLKFGLIPEFIGRLPVLATLEDLDEDALVKILTEPKNALIKQYQRL 337
Query: 564 FQMN 567
F M
Sbjct: 338 FDME 341
>gi|358639056|dbj|BAL26353.1| ATP-dependent protease ATP-binding subunit [Azoarcus sp. KH32C]
Length = 426
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/308 (56%), Positives = 224/308 (72%), Gaps = 23/308 (7%)
Query: 262 GNK-FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
G+K P P +I LD++VIGQ+RAK++L+VAVYNHY R+ + ++
Sbjct: 63 GDKALPRPTQIHAILDQYVIGQDRAKRILAVAVYNHYKRLRHAAA--------------- 107
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
+ + VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+
Sbjct: 108 -NTNEVELAKSNILLVGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENII 166
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL DY+V AQ+GIVY+DE+DKI +K+++ +I+RDVSGEGVQQALLK++EGTV +V
Sbjct: 167 QKLLQKCDYDVDKAQRGIVYVDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTVASV 226
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHP D IQ+DT +ILFICGGAF +E+ I R + IGFGA V+
Sbjct: 227 PPQGGRKHPGQDFIQVDTSNILFICGGAFDGLERVIRRRHEKGGIGFGAEVK------NA 280
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D T L+ VE +DLI +GLIPEFVGR PV+ +L L E LVQ+L EPKNAL KQY
Sbjct: 281 EDTRSTGELLAGVEPADLIRFGLIPEFVGRLPVVATLAELDEAALVQILVEPKNALVKQY 340
Query: 561 RKMFQMNG 568
RK+ +M G
Sbjct: 341 RKLLEMEG 348
>gi|260773193|ref|ZP_05882109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
metschnikovii CIP 69.14]
gi|260612332|gb|EEX37535.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
metschnikovii CIP 69.14]
Length = 426
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 225/304 (74%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD +VIGQE AKKVL+VAVYNHY R+ N G+++S D
Sbjct: 65 LPTPREIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDTTS--------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + + IGFGA VR+ + +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRVAKGTGIGFGAEVRSKDNSKSL--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---SELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEKALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|406990092|gb|EKE09781.1| hypothetical protein ACD_16C00110G0016 [uncultured bacterium]
Length = 423
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 227/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PK+I + L+ +VIGQ+RAKKVLSVAV+NHY R+ + +G+
Sbjct: 63 IPAPKQIYEVLNDYVIGQDRAKKVLSVAVHNHYKRL----DHRNHSGD------------ 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 -VELSKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 QAADYNVEKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF IEK IS R + ++IGFGA VR D
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGIEKLISLRGKGTAIGFGADVRG-------PDER 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T L++ +E+ DL+ +GLIPEF+GR P++ +L L E L+++LTEPKNAL KQY+++F
Sbjct: 279 KTGDLLQELETEDLLKFGLIPEFIGRLPIIATLKDLDEGALIEILTEPKNALVKQYKRLF 338
Query: 565 QMNG 568
M G
Sbjct: 339 NMEG 342
>gi|407716204|ref|YP_006837484.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cycloclasticus
sp. P1]
gi|407256540|gb|AFT66981.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cycloclasticus
sp. P1]
Length = 425
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/308 (56%), Positives = 229/308 (74%), Gaps = 24/308 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P P EI + LDK+VIGQ++AKK+LSV+VYNHY R+ + GV
Sbjct: 63 GDKLPKPSEIKESLDKYVIGQQQAKKILSVSVYNHYKRLN---------------ASKGV 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DD VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 DD--VELAKSNVLLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
K+L D++V AQ GIVYIDE+DKI++K+++ +++RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KILQKCDFDVDKAQNGIVYIDEIDKISRKSDNPSLTRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGV 500
+G RKHP+ + +Q+DT +ILFI GGAF ++K I +R Q + IGF A V + A V
Sbjct: 226 PQGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIKDRSQKNVGIGFSAEVVSENEAPDV 285
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
+D +++ VE DL+ YGLIPEFVGR PV+ +L L E+ L+Q+L+EPKNAL KQY
Sbjct: 286 SD------VLQNVEPEDLVKYGLIPEFVGRLPVVATLEELDEDALIQILSEPKNALTKQY 339
Query: 561 RKMFQMNG 568
++F+M G
Sbjct: 340 VRLFEMEG 347
>gi|121611286|ref|YP_999093.1| ATP-dependent protease ATP-binding subunit ClpX [Verminephrobacter
eiseniae EF01-2]
gi|121555926|gb|ABM60075.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Verminephrobacter eiseniae EF01-2]
Length = 447
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/307 (57%), Positives = 222/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI-YNESSQKRSAGESSSCTTDGV 321
N PTP EI LD +VIGQE AK+ L+VAVYNHY R+ Y E ++K
Sbjct: 89 NGLPTPAEIKNNLDNYVIGQEEAKRTLAVAVYNHYKRLRYKEKARK-------------- 134
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+ VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+
Sbjct: 135 --NDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQ 192
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+V+VP
Sbjct: 193 KLLQSCGYKVEPAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMVSVP 252
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP D +QIDT DILFICGGAF +EK I R + S IGFGA V++ + +T
Sbjct: 253 PQGGRKHPNQDFLQIDTSDILFICGGAFAGLEKVIENRTEASGIGFGASVKSK-KQRSLT 311
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D + VE DLI +GLIPE VGR PV+ +L L+E L+Q+LTEP+NAL KQY
Sbjct: 312 D------VFAEVEPEDLIKFGLIPELVGRMPVVTALAELSEQALIQILTEPRNALIKQYG 365
Query: 562 KMFQMNG 568
K+ M G
Sbjct: 366 KLLAMEG 372
>gi|85713355|ref|ZP_01044369.1| ATP-dependent protease ATP-binding subunit [Idiomarina baltica
OS145]
gi|85692822|gb|EAQ30806.1| ATP-dependent protease ATP-binding subunit [Idiomarina baltica
OS145]
Length = 425
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 226/306 (73%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P PKEI K LD +VIGQERAKKVLSVAVYNHY R+ R+AG+
Sbjct: 62 DKLPVPKEIRKHLDDYVIGQERAKKVLSVAVYNHYKRL-------RNAGKGK-------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKT LA+T+AR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DDVELGKSNILLIGPTGSGKTFLAETMARFLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILF+CGGAF +E+ I +R + IGFGA V++
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFVCGGAFAGLERVIEQRLATGTGIGFGAQVKS-------P 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ S ++ VE DL+ YGLIPEF+GR PV+ +L L E+ LV++L EPKNAL KQY
Sbjct: 279 NSAAQSEIISQVEPEDLVRYGLIPEFIGRLPVVATLDELNEDALVEILREPKNALTKQYS 338
Query: 562 KMFQMN 567
+F+M
Sbjct: 339 ALFEME 344
>gi|359411826|ref|ZP_09204291.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
sp. DL-VIII]
gi|357170710|gb|EHI98884.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
sp. DL-VIII]
Length = 429
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/314 (55%), Positives = 226/314 (71%), Gaps = 25/314 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P EI + LD +VIGQERAKK L+VAVYNHY RI DD
Sbjct: 61 PKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRINTNK-----------------DDID 103
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + IQI+T +ILFICGGAF ++K I R + SS+GFGA ++A
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAEIQAKHEKD------- 276
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L++ + +DL+ +GLIPEFVGR P+LV+L +L L+Q+LT+PKNAL KQY+K+F+
Sbjct: 277 VGKLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDREALIQILTKPKNALVKQYKKLFE 336
Query: 566 MNG-QAAFYGKCFE 578
++ + F K E
Sbjct: 337 LDDVKLEFDNKSLE 350
>gi|398808176|ref|ZP_10567044.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Variovorax
sp. CF313]
gi|398088222|gb|EJL78789.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Variovorax
sp. CF313]
Length = 421
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 220/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AK++LSVAVYNHY R+ ++ K D
Sbjct: 65 LPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAK---------------GD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKAQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + VE DLI +GLIPE VGR PV+ SL L+E+ LVQ+LTEPKNA+ KQ+ K+
Sbjct: 284 -ITEVFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLL 342
Query: 565 QMNG 568
QM G
Sbjct: 343 QMEG 346
>gi|384261375|ref|YP_005416561.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodospirillum
photometricum DSM 122]
gi|378402475|emb|CCG07591.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodospirillum
photometricum DSM 122]
Length = 446
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/302 (58%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EI + LD +VIGQ AKKVL+VAV+NHY R+ + G +S
Sbjct: 88 PSPREIMQVLDDYVIGQHHAKKVLAVAVHNHYKRLSH-------VGRNSD---------- 130
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 131 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 190
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 191 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 250
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + SSIGFGA VR +
Sbjct: 251 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGKGSSIGFGADVRD-------PETRR 303
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ YGLIPEFVGR PVL +L L E+ LV +LT PKNAL KQY+K+F+
Sbjct: 304 TGEILRNVEPEDLLKYGLIPEFVGRLPVLATLDDLDEDALVDILTSPKNALVKQYQKLFE 363
Query: 566 MN 567
M
Sbjct: 364 ME 365
>gi|56551845|ref|YP_162684.1| ATP-dependent protease ATP-binding subunit ClpX [Zymomonas mobilis
subsp. mobilis ZM4]
gi|260752593|ref|YP_003225486.1| ATP-dependent protease ATP-binding subunit ClpX [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|384411290|ref|YP_005620655.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|61211394|sp|Q5NNY7.1|CLPX_ZYMMO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56543419|gb|AAV89573.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258551956|gb|ACV74902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|335931664|gb|AEH62204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 422
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD++VIGQ +AK+VLSVAV+NHY R+ + G D
Sbjct: 64 PTPQEICTILDQYVIGQSKAKRVLSVAVHNHYKRLNH-----------------GGKDAD 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + SIGFGA V A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAA-------PDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ E DL+ +GLIPEFVGR PVL +L L ++ LV++LTEPKNAL KQY+K+F+
Sbjct: 280 TGEILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDQSALVRILTEPKNALVKQYQKLFE 339
Query: 566 MN 567
+
Sbjct: 340 LE 341
>gi|319794077|ref|YP_004155717.1| ATP-dependent clp protease, ATP-binding subunit clpx [Variovorax
paradoxus EPS]
gi|315596540|gb|ADU37606.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Variovorax
paradoxus EPS]
Length = 421
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 220/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AK++LSVAVYNHY R+ ++ K D
Sbjct: 65 LPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAK---------------GD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGATVKSKAQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + VE DLI +GLIPE VGR PV+ SL L+E+ LVQ+LTEPKNA+ KQ+ K+
Sbjct: 284 -ITEVFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLL 342
Query: 565 QMNG 568
QM G
Sbjct: 343 QMEG 346
>gi|358012228|ref|ZP_09144038.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
P8-3-8]
Length = 436
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 225/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ + + A
Sbjct: 53 GDWATRPL----PKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQTGHKPA--- 105
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 106 ----------DAVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIIQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQ+DT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKN 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D+ S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 276 K------DDSKKLSELFRQVEAADLVRFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F+M
Sbjct: 330 NALTRQYQYLFEME 343
>gi|399545472|ref|YP_006558780.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
sp. BSs20148]
gi|399160804|gb|AFP31367.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
sp. BSs20148]
Length = 427
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/309 (55%), Positives = 231/309 (74%), Gaps = 29/309 (9%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI-YNESSQKRSAGESSSCTTDGV 321
++ PTP EI + L+++VIGQ+RAK VL+VAVYNHY R+ Y E +
Sbjct: 65 DRLPTPAEIRETLNEYVIGQDRAKVVLAVAVYNHYKRLRYGEGKAE-------------- 110
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 111 ----VELGKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQ 166
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 167 KLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 226
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV--RANMRAGG 499
+G RKHP+ + +Q++T +ILFICGGAF ++K I +R SSIGF A V + N+++ G
Sbjct: 227 PQGGRKHPQQEFLQVNTSNILFICGGAFAGLDKVIQQRSARSSIGFSAEVASKDNIKSPG 286
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
+++ V++ DL+ +GLIPEFVGR PV+ +L L E+ L+Q+LTEPKNAL KQ
Sbjct: 287 --------EIIKDVQTEDLVKFGLIPEFVGRLPVVATLTELDEDALIQILTEPKNALTKQ 338
Query: 560 YRKMFQMNG 568
Y+K+F+M G
Sbjct: 339 YQKLFEMEG 347
>gi|374575869|ref|ZP_09648965.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM471]
gi|386402535|ref|ZP_10087313.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM1253]
gi|374424190|gb|EHR03723.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM471]
gi|385743161|gb|EIG63357.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM1253]
Length = 423
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++L EPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|152995750|ref|YP_001340585.1| ATP-dependent protease ATP-binding subunit ClpX [Marinomonas sp.
MWYL1]
gi|226706592|sp|A6VW21.1|CLPX_MARMS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150836674|gb|ABR70650.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinomonas
sp. MWYL1]
Length = 426
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/306 (54%), Positives = 228/306 (74%), Gaps = 22/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP ++ LD +VIGQ++AK+VL+VAVYNHY R+ ++ G
Sbjct: 66 DELPTPAKLSAALDDYVIGQDKAKRVLAVAVYNHYKRLRHQ----------------GKT 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D ++EL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 DTSIELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVENIIQK 169
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 170 LLQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 229
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF +E+ IS+R + SSIGF A V++ ++
Sbjct: 230 QGGRKHPQQEFLQVDTSNILFICGGAFAGLERVISDRTEKSSIGFSATVKSKEEGRSFSE 289
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
AV VE+ DL+ +GLIPEFVGR PV+ +L L E L+ +L++PKNAL KQY+
Sbjct: 290 AV------HRVETEDLVKFGLIPEFVGRLPVVATLSELDEEALMTILSQPKNALVKQYQH 343
Query: 563 MFQMNG 568
+F++ G
Sbjct: 344 LFELEG 349
>gi|56695905|ref|YP_166256.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria pomeroyi
DSS-3]
gi|81350417|sp|Q5LUP9.1|CLPX_SILPO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56677642|gb|AAV94308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria
pomeroyi DSS-3]
Length = 424
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 225/302 (74%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++IC LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 66 PTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRL----NHAQKAGSD------------ 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VRA+ G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERG------- 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 283 VGELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFE 342
Query: 566 MN 567
+
Sbjct: 343 LE 344
>gi|167038049|ref|YP_001665627.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116458|ref|YP_004186617.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|326391009|ref|ZP_08212558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus JW 200]
gi|392940443|ref|ZP_10306087.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacter siderophilus SR4]
gi|238687678|sp|B0KBA3.1|CLPX_THEP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166856883|gb|ABY95291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929549|gb|ADV80234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|325992954|gb|EGD51397.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus JW 200]
gi|392292193|gb|EIW00637.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacter siderophilus SR4]
Length = 424
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 225/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P PKEI + LD++VIGQE+AKK L+VAVYNHY RI + +
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRINSR-----------------IKP 101
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 102 DDVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 162 IQAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFICGGAF IEK I R S+GFGA V++
Sbjct: 222 GGRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKD----- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S ++ + DL+ +G+IPEF+GR P++V+L L+++ LV++LTEPKNAL KQY K+
Sbjct: 277 --LSEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKL 334
Query: 564 FQMNG 568
F+++G
Sbjct: 335 FELDG 339
>gi|345017120|ref|YP_004819473.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344032463|gb|AEM78189.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 424
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 225/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P PKEI + LD++VIGQE+AKK L+VAVYNHY RI + +
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRINSR-----------------IKP 101
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 102 DDVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 162 IQAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFICGGAF IEK I R S+GFGA V++
Sbjct: 222 GGRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKD----- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S ++ + DL+ +G+IPEF+GR P++V+L L+++ LV++LTEPKNAL KQY K+
Sbjct: 277 --LSEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKL 334
Query: 564 FQMNG 568
F+++G
Sbjct: 335 FELDG 339
>gi|150016210|ref|YP_001308464.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
beijerinckii NCIMB 8052]
gi|189082489|sp|A6LT28.1|CLPX_CLOB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|149902675|gb|ABR33508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
beijerinckii NCIMB 8052]
Length = 429
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P EI + LD +VIGQERAKK L+VAVYNHY RI +D
Sbjct: 61 PKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRINTNK-----------------EDID 103
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + IQI+T +ILFICGGAF ++K I R + SS+GFGA ++A
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAQIQAKHEKD------- 276
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
SL++ + +DL+ +GLIPEFVGR P+LV+L +L + L+Q+LT+PKNAL KQY+K+F+
Sbjct: 277 VGSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDKEALIQILTKPKNALVKQYKKLFE 336
Query: 566 MN 567
++
Sbjct: 337 LD 338
>gi|239815494|ref|YP_002944404.1| ATP-dependent protease ATP-binding subunit ClpX [Variovorax
paradoxus S110]
gi|259491272|sp|C5CJT5.1|CLPX_VARPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|239802071|gb|ACS19138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Variovorax
paradoxus S110]
Length = 421
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 220/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AK++LSVAVYNHY R+ ++ K D
Sbjct: 65 LPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAK---------------GD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKAQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + VE DLI +GLIPE VGR PV+ SL L+E+ LVQ+LTEPKNA+ KQ+ K+
Sbjct: 284 -ITEVFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLL 342
Query: 565 QMNG 568
QM G
Sbjct: 343 QMEG 346
>gi|349575767|ref|ZP_08887673.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
shayeganii 871]
gi|348012631|gb|EGY51572.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
shayeganii 871]
Length = 435
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 219/306 (71%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI LD+ VIGQE+AKK L+VAVYNHY R+ + +
Sbjct: 76 DRLPTPAEIVANLDQHVIGQEQAKKALAVAVYNHYKRLRHPK-----------------E 118
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA++LAR +NVPFV+ADATTLT+AGYVGEDVE I+ K
Sbjct: 119 GDNVELSKSNILLIGPTGSGKTLLAQSLARKLNVPFVMADATTLTEAGYVGEDVEQIITK 178
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 179 LLGKCDFDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 238
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + I +DT +ILFICGGAF +EK I +R + IGFGA V + +T+
Sbjct: 239 QGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDEDADITE 298
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L E VE DLI +GLIPE +GR PV+ +L L E+ L+ +LTEPKNAL KQY+
Sbjct: 299 ------LFEVVEPEDLIKFGLIPELIGRLPVIATLAELDEDALINILTEPKNALVKQYQA 352
Query: 563 MFQMNG 568
+F M G
Sbjct: 353 LFAMEG 358
>gi|254480379|ref|ZP_05093626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [marine gamma
proteobacterium HTCC2148]
gi|214038962|gb|EEB79622.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [marine gamma
proteobacterium HTCC2148]
Length = 432
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/312 (55%), Positives = 222/312 (71%), Gaps = 20/312 (6%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G + P P+EI LD++VIGQ+RAKKVLSVAVYNHY R+ + SQ R
Sbjct: 59 AGDTPQDHLPVPQEINGILDEYVIGQKRAKKVLSVAVYNHYKRLRHAQSQTRG------- 111
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
+ VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDV
Sbjct: 112 -------EEVELGKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDV 164
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 165 ENIIQKLLQKCDYDVEKAQVGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 224
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V +VP +G RKHP+ + +Q+DT +ILFICGGAF ++ I R + IGFGA V++
Sbjct: 225 VASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDNVIRNRSEKRGIGFGAEVKSKDE 284
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ L+ +E DL+ YGLIPEFVGR PV+ +L L LVQ+LTEPKN+L
Sbjct: 285 TSNI------GELLFELEPEDLVQYGLIPEFVGRLPVIATLEELDAEALVQILTEPKNSL 338
Query: 557 GKQYRKMFQMNG 568
KQY K+F+M G
Sbjct: 339 TKQYSKLFEMEG 350
>gi|425740489|ref|ZP_18858660.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-487]
gi|425494753|gb|EKU60948.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-487]
Length = 437
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 224/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHVSKD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKK 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 KDESKKIAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFNME 342
>gi|262277076|ref|ZP_06054869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [alpha
proteobacterium HIMB114]
gi|262224179|gb|EEY74638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [alpha
proteobacterium HIMB114]
Length = 423
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 228/310 (73%), Gaps = 23/310 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI L+++VIGQ++AK++LSVAV+NHY R+ G + + D
Sbjct: 60 PTPKEIFSILNEYVIGQKKAKQILSVAVHNHYKRL----------GHTEKSSND------ 103
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 VELAKSNILLIGPTGCGKTLLAQTLAKILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 164 AADYNVEKAQRGIVYIDEVDKISRKTENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFI GGAF I+K IS+R Q SSIGFGA ++ ++ G
Sbjct: 224 RKHPQQEFLQVDTTNILFIVGGAFAGIDKIISDRGQGSSIGFGAKIKDKIKKG------- 276
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L++ VE DL+ +GLIPEF+GR P++ +L L E LVQ+L EPKN+L KQY K+F+
Sbjct: 277 VGELIKDVEPEDLLKFGLIPEFIGRLPIISTLEDLDEESLVQILEEPKNSLTKQYSKLFE 336
Query: 566 MNGQAAFYGK 575
+ G + K
Sbjct: 337 IEGVKLTFAK 346
>gi|346995187|ref|ZP_08863259.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria sp. TW15]
Length = 421
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 225/302 (74%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 64 PTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRL----NHAQKAGSD------------ 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VR N G
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDNDERG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT PKNAL KQY+++F+
Sbjct: 281 VGEIFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTSPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|224824982|ref|ZP_03698088.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania ferrooxidans 2002]
gi|347540403|ref|YP_004847828.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudogulbenkiania sp. NH8B]
gi|224602653|gb|EEG08830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania ferrooxidans 2002]
gi|345643581|dbj|BAK77414.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania sp. NH8B]
Length = 424
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/315 (55%), Positives = 221/315 (70%), Gaps = 23/315 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G G PTP+EI LD+++IGQ+ AKK LSVAVYNHY R+Y +
Sbjct: 55 GIEAAEGEGQPLPTPQEIRSDLDQYIIGQDIAKKTLSVAVYNHYKRLYTPT--------- 105
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D D VEL KSNILL+GPTGSGKTLLA++LAR ++VPFVIADATTLT+AGYVG
Sbjct: 106 --------DKDDVELAKSNILLIGPTGSGKTLLAQSLARLLDVPFVIADATTLTEAGYVG 157
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE I+ KLL DY+V AQ+GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++
Sbjct: 158 EDVEHIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLI 217
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP + IQ+DT +ILFICGGAF +EK I R + IGFGA V +
Sbjct: 218 EGTVASIPPQGGRKHPNQEFIQVDTTNILFICGGAFDGLEKIIRRRSEKGGIGFGAEVSS 277
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + S L + VE DLI +GLIPE +GR PV+ +L L E LV +LT+PK
Sbjct: 278 KDESKSI------SVLFKDVEPGDLIKFGLIPELIGRLPVVATLEELDEEALVTILTQPK 331
Query: 554 NALGKQYRKMFQMNG 568
NAL KQY+++F + G
Sbjct: 332 NALVKQYQRLFSLEG 346
>gi|357384550|ref|YP_004899274.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pelagibacterium halotolerans B2]
gi|351593187|gb|AEQ51524.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pelagibacterium halotolerans B2]
Length = 425
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/311 (55%), Positives = 229/311 (73%), Gaps = 29/311 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P +ICK LD +VIGQ RAK+VLSVAV+NHY R+++ + +
Sbjct: 66 PSPADICKVLDDYVIGQRRAKRVLSVAVHNHYKRLHHATKNQ-----------------D 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 AADYNVDKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF +EK I+ R ++SSIGF A V+ + R G V
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLEKVIAARGENSSIGFTAAVKDPNDRRVGDV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ VE D++ +GLIPEF+GR PV+ +L L E+ LVQ+L+EPKNAL +QY ++
Sbjct: 286 ------LAEVEPEDMVRFGLIPEFIGRLPVIATLEDLDEDALVQILSEPKNALVRQYARL 339
Query: 564 FQMNG-QAAFY 573
F+M Q F+
Sbjct: 340 FEMEDVQLTFH 350
>gi|319763663|ref|YP_004127600.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Alicycliphilus denitrificans BC]
gi|330824072|ref|YP_004387375.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alicycliphilus
denitrificans K601]
gi|317118224|gb|ADV00713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicycliphilus denitrificans BC]
gi|329309444|gb|AEB83859.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicycliphilus denitrificans K601]
Length = 421
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 222/304 (73%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AK+ L+VAVYNHY R+ + K AG+ D
Sbjct: 65 LPTPAEIKANLDSYVIGQEKAKRTLAVAVYNHYKRLRH----KDKAGK-----------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + + +E DLI +GLIPE VGR PV+ +L L E+ LVQ+LTEPKNAL KQY K+
Sbjct: 284 -LTEVFQDIEPEDLIKFGLIPELVGRMPVVTALAELGEDALVQILTEPKNALVKQYSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|296284616|ref|ZP_06862614.1| ATP-dependent protease ATP-binding subunit ClpX [Citromicrobium
bathyomarinum JL354]
Length = 421
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 217/305 (71%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTP EIC L+ +VIGQERAK+VLSVAV+NHY R+ + Q
Sbjct: 60 EVPTPSEICATLNDYVIGQERAKRVLSVAVHNHYKRLKHAGKQG---------------- 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL KSNILL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 -DVELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKL 162
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L SDYNV AQ GIVYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 163 LQASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQ 222
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I +R Q SIGFGA V D
Sbjct: 223 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIGDRLQKRSIGFGAHV-------ADPDK 275
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+E E DL+ +GLIPEFVGR PV+ SL L + LV +L EPKNA+ KQY K+
Sbjct: 276 RRIGELLEKSEPEDLLKFGLIPEFVGRLPVIASLHDLDVDALVTILQEPKNAIVKQYAKL 335
Query: 564 FQMNG 568
F++ G
Sbjct: 336 FELEG 340
>gi|442611656|ref|ZP_21026362.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441747584|emb|CCQ12424.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 427
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 226/308 (73%), Gaps = 24/308 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K PTPKEI LD +VIGQ+ AKKVL+VAVYNHY R+ N+ ++
Sbjct: 64 ADKLPTPKEIRNHLDDYVIGQDHAKKVLAVAVYNHYKRLRNQETKA-------------- 109
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 110 ---DVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQ 166
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 167 KLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 226
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGV 500
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFGA V+ +
Sbjct: 227 PQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSHKNTGIGFGAQVKGADSKQTL 286
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
T+A + VE DL+ YGLIPEF+GR PV+ +L L E+ L+Q+L+EPKNAL KQ+
Sbjct: 287 TEA------FQQVEPEDLVKYGLIPEFIGRLPVVATLTELDESALIQILSEPKNALTKQF 340
Query: 561 RKMFQMNG 568
+F+M G
Sbjct: 341 AALFKMEG 348
>gi|333908457|ref|YP_004482043.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
posidonica IVIA-Po-181]
gi|333478463|gb|AEF55124.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
posidonica IVIA-Po-181]
Length = 426
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/308 (54%), Positives = 226/308 (73%), Gaps = 22/308 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP ++ LD +VIGQ+RAK+VL+VAVYNHY R+ ++ G
Sbjct: 66 DELPTPMKLSTALDDYVIGQDRAKRVLAVAVYNHYKRLRHQ----------------GKS 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 DSGIELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVENIIQK 169
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 170 LLQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 229
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF +E+ I ER + SSIGF A V++ ++
Sbjct: 230 QGGRKHPQQEFLQVDTSNILFICGGAFAGLERVIGERTEKSSIGFSAKVKSKDEGKSFSE 289
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
V VE+ DL+ +GLIPEFVGR PV+ +L L + LV +L+EPKNAL KQY+
Sbjct: 290 TV------HNVETEDLVKFGLIPEFVGRLPVVATLSELDQEALVTILSEPKNALVKQYQH 343
Query: 563 MFQMNGQA 570
+F++ G A
Sbjct: 344 LFELEGVA 351
>gi|163851840|ref|YP_001639883.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
extorquens PA1]
gi|218530632|ref|YP_002421448.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
extorquens CM4]
gi|240139004|ref|YP_002963479.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens AM1]
gi|254561599|ref|YP_003068694.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DM4]
gi|418060065|ref|ZP_12697993.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DSM 13060]
gi|238687353|sp|A9W5F6.1|CLPX_METEP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763853|sp|B7KNT1.1|CLPX_METC4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|163663445|gb|ABY30812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium extorquens PA1]
gi|218522935|gb|ACK83520.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium extorquens CM4]
gi|240008976|gb|ACS40202.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens AM1]
gi|254268877|emb|CAX24838.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DM4]
gi|373566383|gb|EHP92384.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DSM 13060]
Length = 423
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ+ AKKVLSVAV+NHY R+ + + +
Sbjct: 64 PTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHATKH-----------------ND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS+R + +SIGFGA V+A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA-------PDDRR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + +VE DL+ +GLIPEFVGR PVL +L L E L ++L EPKNAL KQY+++F+
Sbjct: 280 TGEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|150388890|ref|YP_001318939.1| ATP-dependent protease ATP-binding subunit ClpX [Alkaliphilus
metalliredigens QYMF]
gi|229889848|sp|A6TM62.1|CLPX_ALKMQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|149948752|gb|ABR47280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alkaliphilus
metalliredigens QYMF]
Length = 420
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/316 (55%), Positives = 233/316 (73%), Gaps = 25/316 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI L+ +VIGQE+AKK L+VAVYNHY RI TD DD
Sbjct: 60 LPKPKEIKDILNGYVIGQEKAKKALAVAVYNHYKRI----------------NTDTKTDD 103
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNI+++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 -VELQKSNIMMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ A++GI+YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILFICGGAF IEK I +R +S+GFGA V++ + V D
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFDGIEKLIQKRTGKTSMGFGADVKSKV----VKD-- 276
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L++ ++ DL+ +GLIPEFVGR PV+V+L L E L+++LTEPKNAL KQY+K+F
Sbjct: 277 -IGGLLKQIQPEDLLKFGLIPEFVGRLPVIVTLDQLDEAALIEILTEPKNALVKQYKKLF 335
Query: 565 QMNG-QAAFYGKCFEI 579
+++G F G+ ++
Sbjct: 336 EIDGVNVEFEGEALKL 351
>gi|91787907|ref|YP_548859.1| ATP-dependent protease ATP-binding subunit ClpX [Polaromonas sp.
JS666]
gi|123165007|sp|Q12BY1.1|CLPX_POLSJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91697132|gb|ABE43961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Polaromonas
sp. JS666]
Length = 421
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 177/307 (57%), Positives = 221/307 (71%), Gaps = 28/307 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AK+ L+VAVYNHY R+ ++ K+ D
Sbjct: 65 LPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKEKAKK---------------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +Q+DT +ILFICGGAF +EK I R + S IGFGA V++
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFGALVKSKK--------- 280
Query: 505 VTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
T SL E+ VE DLI +GLIPE VGR PV+ +L LTE+ LVQ+LTEPKNA+ KQ+
Sbjct: 281 -TRSLTESFKEVEPEDLIKFGLIPELVGRMPVVATLAELTEDALVQILTEPKNAVVKQFS 339
Query: 562 KMFQMNG 568
K+ M G
Sbjct: 340 KLLSMEG 346
>gi|256752436|ref|ZP_05493295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus CCSD1]
gi|256748705|gb|EEU61750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus CCSD1]
Length = 424
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 225/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P PKEI + LD++VIGQE+AKK L+VAVYNHY RI + +
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRINSR-----------------IKP 101
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 102 DDVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 162 IQAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFICGGAF IEK I R S+GFGA V++
Sbjct: 222 GGRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKD----- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S ++ + DL+ +G+IPEF+GR P++V+L L+++ LV++LTEPKNAL KQY K+
Sbjct: 277 --LSEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKL 334
Query: 564 FQMNG 568
F+++G
Sbjct: 335 FELDG 339
>gi|167040914|ref|YP_001663899.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
sp. X514]
gi|300914950|ref|ZP_07132266.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X561]
gi|307723816|ref|YP_003903567.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X513]
gi|238687634|sp|B0K532.1|CLPX_THEPX RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166855154|gb|ABY93563.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X514]
gi|300889885|gb|EFK85031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X561]
gi|307580877|gb|ADN54276.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X513]
Length = 424
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 225/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P PKEI + LD++VIGQE+AKK L+VAVYNHY RI + +
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRINSR-----------------IKP 101
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 102 DDVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 162 IQAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFICGGAF IEK I R S+GFGA V++
Sbjct: 222 GGRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKD----- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S ++ + DL+ +G+IPEF+GR P++V+L L+++ LV++LTEPKNAL KQY K+
Sbjct: 277 --LSEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKL 334
Query: 564 FQMNG 568
F+++G
Sbjct: 335 FELDG 339
>gi|284006422|emb|CBA71658.1| ATP-dependent Clp protease ATP-binding subunit [Arsenophonus
nasoniae]
Length = 428
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 224/305 (73%), Gaps = 20/305 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AKKVL+VAVYNHY R+ N S++ GV+ +
Sbjct: 64 LPTPHEIRHHLDDYVIGQENAKKVLAVAVYNHYKRLRNVSNE-------------GVNGE 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 170
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 171 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 230
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGF A V++ ++
Sbjct: 231 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFSAEVKSE------SER 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 285 ATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLGELSEEALIQILKEPKNALTKQYQAL 344
Query: 564 FQMNG 568
F++ G
Sbjct: 345 FELEG 349
>gi|254512525|ref|ZP_05124592.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium KLH11]
gi|221536236|gb|EEE39224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium KLH11]
Length = 421
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/308 (56%), Positives = 229/308 (74%), Gaps = 24/308 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 64 PTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRL----NHAQKAGSD------------ 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VR N G
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDNDDRG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT PKNAL KQY+++F+
Sbjct: 281 VGEIFKELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTSPKNALVKQYQRLFE 340
Query: 566 M-NGQAAF 572
+ + + AF
Sbjct: 341 LEDAELAF 348
>gi|383640601|ref|ZP_09953007.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
elodea ATCC 31461]
Length = 421
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/303 (57%), Positives = 219/303 (72%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EIC LD +VIGQ++AK+VLSVAV+NHY R+ + G
Sbjct: 65 PSPQEICDVLDDYVIGQKKAKRVLSVAVHNHYKRLNH-----------------GAKGAD 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I +R Q SIGFGA V A D
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAHVAA-------PDERR 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T L+ E DL+ +GLIPEFVGR PV+ +L L L+++LTEPKNAL KQY+K+F
Sbjct: 281 TGELLRQTEPEDLLKFGLIPEFVGRLPVIATLEDLDVEALIKILTEPKNALVKQYQKLFD 340
Query: 566 MNG 568
M
Sbjct: 341 MEA 343
>gi|323136624|ref|ZP_08071705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocystis
sp. ATCC 49242]
gi|322397941|gb|EFY00462.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocystis
sp. ATCC 49242]
Length = 422
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 224/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EICK LD +VIGQ +AK+VLSVAV+NHY R+ + +
Sbjct: 63 IPTPREICKVLDDYVIGQAQAKRVLSVAVHNHYKRLNHATKH-----------------G 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
SDYNV AQ+GIVY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGFGA V+A D
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGATVQA-------PDDR 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T + V+ DL+ +GLIPEFVGR PV+ +L L E+ L ++LTEPKNAL KQY+++F
Sbjct: 279 RTGDIFRQVQPEDLLKFGLIPEFVGRLPVIATLEDLDEDALKKILTEPKNALVKQYQRLF 338
Query: 565 QMN 567
+M
Sbjct: 339 EME 341
>gi|91793846|ref|YP_563497.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
denitrificans OS217]
gi|123060778|sp|Q12LA2.1|CLPX_SHEDO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91715848|gb|ABE55774.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
denitrificans OS217]
Length = 426
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 223/306 (72%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD++VIGQ++AKKVL+VAVYNHY R+ N G
Sbjct: 63 DKLPTPHELRNHLDEYVIGQDKAKKVLAVAVYNHYKRLRN-----------------GTT 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 KEGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFAMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R + IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHTGTGIGFGAEVK------GEQ 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S ++ VE DL+ YGLIPEF+GR PV+ +L L E+ L+Q+L++PKNAL KQY
Sbjct: 280 DKATISQILGQVEPEDLVKYGLIPEFIGRLPVVATLTELDESALIQILSQPKNALTKQYG 339
Query: 562 KMFQMN 567
+F+M
Sbjct: 340 ALFEME 345
>gi|157374681|ref|YP_001473281.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
sediminis HAW-EB3]
gi|189044153|sp|A8FTI0.1|CLPX_SHESH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157317055|gb|ABV36153.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sediminis HAW-EB3]
Length = 425
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/307 (56%), Positives = 222/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP+E+ LD +VIGQ++AKKVLSVAVYNHY R+ N +
Sbjct: 63 DKLPTPRELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNAGPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILF+CGGAF +EK I +R + IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFVCGGAFSGLEKVIEQRSHTGTGIGFGAEVK------GED 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S ++ VE DL+ YGLIPEF+GR PVL +L L + L+Q+L+EPKNA+ KQ+
Sbjct: 280 DKASISDILMQVEPEDLVKYGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAITKQFA 339
Query: 562 KMFQMNG 568
+F M G
Sbjct: 340 ALFDMEG 346
>gi|253999169|ref|YP_003051232.1| ATP-dependent protease ATP-binding subunit ClpX [Methylovorus
glucosetrophus SIP3-4]
gi|253985848|gb|ACT50705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylovorus
glucosetrophus SIP3-4]
Length = 423
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 225/304 (74%), Gaps = 21/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEIC LD++VIGQ +AKK L+VAVYNHY R+ ++S+ K D D
Sbjct: 62 LPTPKEICNILDQYVIGQTQAKKNLAVAVYNHYKRL-DQSATK--------------DKD 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VE+ KSNIL++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY++ AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 QKCDYDIEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + +Q+DT +ILFICGGAF ++K I R + IGFGA V++ D
Sbjct: 227 GRKHPNQEFVQLDTTNILFICGGAFDGLDKIIRRRSEKGGIGFGAEVKSK------DDLR 280
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DLI +GLIPEFVGR P + +L +L E+ L+++L EPKNAL KQY K+F
Sbjct: 281 EVGEVLREVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALMKILVEPKNALTKQYAKLF 340
Query: 565 QMNG 568
+M G
Sbjct: 341 KMEG 344
>gi|378825566|ref|YP_005188298.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii HH103]
gi|365178618|emb|CCE95473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sinorhizobium
fredii HH103]
Length = 425
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 230/304 (75%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD++VIGQ++AK++LSVAV+NHY R+ + A +SS
Sbjct: 67 PTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAH-------AAKSSD---------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA VR+ + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSPEDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|264677388|ref|YP_003277294.1| ATP-dependent Clp protease ATP-binding subunit [Comamonas
testosteroni CNB-2]
gi|262207900|gb|ACY31998.1| ATP-dependent Clp protease, ATP-binding subunit [Comamonas
testosteroni CNB-2]
Length = 420
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 221/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AK+ L+VAVYNHY R+ + K AG+ D
Sbjct: 64 LPTPAEIKANLDNYVIGQEQAKRTLAVAVYNHYKRL----NHKDKAGK-----------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASIPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFIC GAF +EK I R + S IGFGA V++ +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICSGAFAGLEKVIENRTEASGIGFGATVKSKKQRS------ 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S + +E DLI +G+IPE VGR PV+ +L L+E+ LVQ+LTEPKNAL KQY K+
Sbjct: 283 -ISEMFLEIEPEDLIKFGIIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLL 341
Query: 565 QMNG 568
M G
Sbjct: 342 AMEG 345
>gi|188581624|ref|YP_001925069.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
populi BJ001]
gi|238692872|sp|B1Z9C8.1|CLPX_METPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|179345122|gb|ACB80534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium populi BJ001]
Length = 423
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ+ AKKVLSVAV+NHY R+ + + +
Sbjct: 64 PTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHATKH-----------------ND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS+R + +SIGFGA V+A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA-------PDDRR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + +VE DL+ +GLIPEFVGR PVL +L L E L ++L EPKNAL KQY+++F+
Sbjct: 280 TGEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|253996689|ref|YP_003048753.1| ATP-dependent protease ATP-binding subunit ClpX [Methylotenera
mobilis JLW8]
gi|253983368|gb|ACT48226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
mobilis JLW8]
Length = 426
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 224/304 (73%), Gaps = 18/304 (5%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EICK LD++VIGQ +AKK L+VAVYNHY R+ + + +G D
Sbjct: 63 LPTPQEICKILDQYVIGQTQAKKNLAVAVYNHYKRLGHNN------------LANGGQKD 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 EVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLL 170
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+ AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV ++P +G
Sbjct: 171 QKCDYDTEKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQG 230
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + +Q+DT +ILFICGGAF +EK I R + IGFGA V++ D
Sbjct: 231 GRKHPNQEFVQLDTTNILFICGGAFDGLEKVIRLRSEKGGIGFGAEVKSK------ADVR 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+++ VE DLI +GLIPEF+GR PV+ +L +L E L+ +LTEPKNAL KQY K+F
Sbjct: 285 EVGAVLRDVEPEDLIKFGLIPEFIGRLPVVATLESLDEAALMTILTEPKNALTKQYIKLF 344
Query: 565 QMNG 568
+M G
Sbjct: 345 KMEG 348
>gi|227821607|ref|YP_002825577.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
fredii NGR234]
gi|254763858|sp|C3MA45.1|CLPX_RHISN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|227340606|gb|ACP24824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii NGR234]
Length = 425
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 230/304 (75%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD++VIGQ++AK++LSVAV+NHY R+ + A +SS
Sbjct: 67 PTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAH-------AAKSSD---------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA VR+ + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSPEDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|77463764|ref|YP_353268.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides 2.4.1]
gi|123591634|sp|Q3J1G7.1|CLPX_RHOS4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77388182|gb|ABA79367.1| ATP-dependent protease Clp, ATPase subunit [Rhodobacter sphaeroides
2.4.1]
Length = 421
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/303 (58%), Positives = 225/303 (74%), Gaps = 25/303 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ AK+VLSVAV+NHY R+ N SS+ TD
Sbjct: 64 PTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRL-NHSSK-----------TD------ 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV Q+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASEYNVERVQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I++R + S IGFGA V+ DA
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD-------PDARG 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L + +E DL +GLIPEFVGR PV+ +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 279 VGELFKELEPEDLPKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALVKQYQRLFE 338
Query: 566 MNG 568
+ G
Sbjct: 339 IEG 341
>gi|313201271|ref|YP_004039929.1| ATP-dependent clp protease, ATP-binding subunit clpx [Methylovorus
sp. MP688]
gi|312440587|gb|ADQ84693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylovorus
sp. MP688]
Length = 423
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 225/304 (74%), Gaps = 21/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEIC LD++VIGQ +AKK L+VAVYNHY R+ ++S+ K D D
Sbjct: 62 LPTPKEICNILDQYVIGQTQAKKNLAVAVYNHYKRL-DQSATK--------------DKD 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VE+ KSNIL++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY++ AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 QKCDYDIEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + +Q+DT +ILFICGGAF ++K I R + IGFGA V++ D
Sbjct: 227 GRKHPNQEFVQLDTTNILFICGGAFDGLDKIIRRRSEKGGIGFGAEVKSK------DDLR 280
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DLI +GLIPEFVGR P + +L +L E+ L+++L EPKNAL KQY K+F
Sbjct: 281 EVGEVLREVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALMKILVEPKNALTKQYAKLF 340
Query: 565 QMNG 568
+M G
Sbjct: 341 KMEG 344
>gi|341616022|ref|ZP_08702891.1| ATP-dependent protease ATP-binding subunit ClpX [Citromicrobium sp.
JLT1363]
Length = 422
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 220/305 (72%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P+P EIC L+ +VIGQERAK+VLSVAV+NHY R+ + AG+
Sbjct: 63 EVPSPSEICATLNDYVIGQERAKRVLSVAVHNHYKRL-------KHAGKQGD-------- 107
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL KSNILL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 --VELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKL 165
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L SDYNV AQ GIVYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 166 LQASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQ 225
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I++R Q SIGFGA V D
Sbjct: 226 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV-------ADPDK 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+E E DL+ +GLIPEFVGR PV+ SL L + LV +L EPKNA+ KQY K+
Sbjct: 279 RRIGELLEKSEPEDLLKFGLIPEFVGRLPVIASLHDLDVDALVTILQEPKNAIVKQYAKL 338
Query: 564 FQMNG 568
F++ G
Sbjct: 339 FELEG 343
>gi|445437356|ref|ZP_21441002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC021]
gi|444753938|gb|ELW78574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC021]
Length = 437
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 224/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHVSKD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKK 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 KDESKKIAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFNME 342
>gi|226329067|ref|ZP_03804585.1| hypothetical protein PROPEN_02970 [Proteus penneri ATCC 35198]
gi|225202253|gb|EEG84607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Proteus
penneri ATCC 35198]
Length = 423
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/307 (56%), Positives = 223/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI K LD +VIGQE AKKVL+VAVYNHY R+ N G
Sbjct: 62 SELPTPHEIRKHLDDYVIGQELAKKVLAVAVYNHYKRLRN-----------------GDK 104
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 ANGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 LLQKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K +++R S IGFGA V++
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQ------K 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ VE DLI +GLIPEF+GR PV+ +L L E L+Q+L EPKNAL KQY+
Sbjct: 279 EKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEEALIQILQEPKNALTKQYQ 338
Query: 562 KMFQMNG 568
+F++ G
Sbjct: 339 ALFKLEG 345
>gi|34498012|ref|NP_902227.1| ATP-dependent protease ATP-binding subunit ClpX [Chromobacterium
violaceum ATCC 12472]
gi|46576429|sp|Q7NUZ0.1|CLPX_CHRVO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|34103867|gb|AAQ60227.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chromobacterium violaceum ATCC 12472]
Length = 426
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/311 (55%), Positives = 224/311 (72%), Gaps = 23/311 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG++ + PTP+EI LD+++IGQ+ AKK LSVAVYNHY R+YN+ +
Sbjct: 60 GGASADHPLPTPQEIRADLDQYIIGQDFAKKTLSVAVYNHYKRLYNKGGK---------- 109
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA++LAR ++VPFVIADATTLT+AGYVGEDV
Sbjct: 110 -------DDVELAKSNILLIGPTGSGKTLLAQSLARLLDVPFVIADATTLTEAGYVGEDV 162
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E I+ KLL DY+V AQ+GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT
Sbjct: 163 EHIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGT 222
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V +VP +G RKHP + IQ+DT +ILFICGGAF ++K I +R + IGFGA V +
Sbjct: 223 VASVPPQGGRKHPNQEFIQVDTTNILFICGGAFDGLDKIIRQRSEKGGIGFGAEVSSK-- 280
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
D + L + VE D+I +GLIPE +GR PV+ +L L E LV +LT+PKNAL
Sbjct: 281 ----DDGKSLTKLFQEVEPQDIIRFGLIPELIGRLPVVATLEELDEEALVSILTQPKNAL 336
Query: 557 GKQYRKMFQMN 567
KQY+K+F +
Sbjct: 337 IKQYQKLFSLE 347
>gi|387131589|ref|YP_006294479.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM7]
gi|386272878|gb|AFJ03792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM7]
Length = 423
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/300 (57%), Positives = 217/300 (72%), Gaps = 23/300 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTP EI LD +VIGQE+AK+VLSVAVYNHY R+ + G
Sbjct: 62 RLPTPHEINTALDNYVIGQEKAKRVLSVAVYNHYKRLRH-----------------GQKS 104
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 DDVELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKL 164
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V A+ GIVYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 165 LQKCDYDVDKAETGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 224
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT ILFICGGAF ++K I R IGF A V++ ++A
Sbjct: 225 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRSHKGGIGFSAEVKSVETQRSFSEA 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++TVE DLI YGLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY+KM
Sbjct: 285 ------LQTVEPEDLIQYGLIPEFVGRLPVVATLNELDEAALIQILTEPKNALTKQYQKM 338
>gi|416253184|ref|ZP_11638207.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis O35E]
gi|326577945|gb|EGE27809.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis O35E]
Length = 438
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 218/308 (70%), Gaps = 21/308 (6%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L P PKE+ LD +VIGQ+ AKK L+VAVYNHY R+ D
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRL--------------KVANDK 127
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VEL KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 128 KDTDGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIV 187
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL SDY+V A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV N+
Sbjct: 188 QKLLQASDYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANI 247
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHPR + IQ+DT +IL I GGAF ++K I +R + + IGF A V+A
Sbjct: 248 PPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQ------ 301
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D + L VE+ DLI +GLIPE +GR PV+ SL L E LVQ+LTEPKNAL KQY
Sbjct: 302 -DESSITELFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQY 360
Query: 561 RKMFQMNG 568
+ +F M G
Sbjct: 361 QYLFDMEG 368
>gi|75676089|ref|YP_318510.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrobacter
winogradskyi Nb-255]
gi|123773227|sp|Q3SRD3.1|CLPX_NITWN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|74420959|gb|ABA05158.1| ClpX, ATPase regulatory subunit [Nitrobacter winogradskyi Nb-255]
Length = 424
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|416248952|ref|ZP_11636286.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis CO72]
gi|326576474|gb|EGE26382.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis CO72]
Length = 438
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 218/308 (70%), Gaps = 21/308 (6%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L P PKE+ LD +VIGQ+ AKK L+VAVYNHY R+ D
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRL--------------KVANDK 127
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VEL KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 128 KDTDGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIV 187
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL SDY+V A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV N+
Sbjct: 188 QKLLQASDYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANI 247
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHPR + IQ+DT +IL I GGAF ++K I +R + + IGF A V+A
Sbjct: 248 PPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQ------ 301
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D + L VE+ DLI +GLIPE +GR PV+ SL L E LVQ+LTEPKNAL KQY
Sbjct: 302 -DESSITELFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQY 360
Query: 561 RKMFQMNG 568
+ +F M G
Sbjct: 361 QYLFDMEG 368
>gi|424057019|ref|ZP_17794536.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
nosocomialis Ab22222]
gi|407440552|gb|EKF47069.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
nosocomialis Ab22222]
Length = 437
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 224/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHVSKD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKK 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 KDESKKIAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFNME 342
>gi|399910854|ref|ZP_10779168.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
KM-1]
Length = 425
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 222/306 (72%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P+EI + LD++VIGQ+RAK VLSVAVYNHY R+ G+
Sbjct: 63 ERLPVPREIRRTLDEYVIGQDRAKTVLSVAVYNHYKRLRA-----------------GIK 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 GDDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFI GGAF ++K I +R + IGF A V++ GV D
Sbjct: 226 QGGRKHPQQEFLQVDTGNILFIVGGAFAGLDKVIRDRAEKGGIGFSAVVKSKDETKGVGD 285
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DL+ +GLIPEFVGR PV+ +L L E+ L+Q+LTEPKN+L KQY +
Sbjct: 286 ------LLADVEPEDLVKFGLIPEFVGRLPVIATLTELNEDALIQILTEPKNSLVKQYAR 339
Query: 563 MFQMNG 568
+F M G
Sbjct: 340 LFDMEG 345
>gi|392408624|ref|YP_006445231.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfomonile tiedjei DSM 6799]
gi|390621760|gb|AFM22967.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfomonile tiedjei DSM 6799]
Length = 417
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 175/302 (57%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP EI + LD++VIGQE AKK+LSVAV+NHY RI ++ D
Sbjct: 60 SKVPTPSEIKRALDEYVIGQELAKKILSVAVHNHYKRIESKP-----------------D 102
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 103 LDGVELQKSNILLVGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENIILT 162
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +DY+++ A +GIVYIDE+DKI++K E+ +I+RDVSGEGVQQALLK++EGT+ NVP
Sbjct: 163 LLQNADYDISRACRGIVYIDEIDKISRKTENPSITRDVSGEGVQQALLKIVEGTMANVPP 222
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
KG RKHP+ + +Q+DT +ILFICGGAFV ++K I R S+GF A + G TD
Sbjct: 223 KGGRKHPQQEFLQVDTTNILFICGGAFVGLDKVIHHRINMKSMGFNAQI-----GGPTTD 277
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
V+S+++E + DLI YGLIPEFVGR PV+ +L L E L+++L EPKNAL KQY+K
Sbjct: 278 --VSSNILEMAQPEDLIHYGLIPEFVGRLPVVATLHELDEEALIRILLEPKNALVKQYKK 335
Query: 563 MF 564
+F
Sbjct: 336 LF 337
>gi|261346363|ref|ZP_05974007.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rustigianii DSM 4541]
gi|282565677|gb|EFB71212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rustigianii DSM 4541]
Length = 425
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/307 (56%), Positives = 225/307 (73%), Gaps = 23/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+ +S
Sbjct: 62 SELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDKTS------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGF A V+ G +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK------GES 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+
Sbjct: 280 EKATEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEDALIQILKEPKNALTKQYQ 339
Query: 562 KMFQMNG 568
+F + G
Sbjct: 340 ALFSLEG 346
>gi|291614262|ref|YP_003524419.1| ATP-dependent Clp protease ATP-binding protein ClpX [Sideroxydans
lithotrophicus ES-1]
gi|291584374|gb|ADE12032.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sideroxydans
lithotrophicus ES-1]
Length = 418
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 220/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P EIC LD++VIGQ +AKK+LSVAVYNHY R+ + D
Sbjct: 63 SELPVPHEICARLDEYVIGQRQAKKILSVAVYNHYKRLKS------------------TD 104
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 ADGVELAKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P
Sbjct: 165 LLQACDYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTKASIPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + +Q+DT +ILFICGGAF +EK I R + + IGF A + + +
Sbjct: 225 QGGRKHPNTEFLQVDTSNILFICGGAFDGLEKVIRNRSEKAGIGFSANLAKRDESNDI-- 282
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ VE DLI +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY+K
Sbjct: 283 ----GKVLRGVEPEDLIKFGLIPEFVGRLPVVATLEGLDEAALIQILTEPKNALTKQYQK 338
Query: 563 MFQMNG 568
+F M G
Sbjct: 339 LFSMEG 344
>gi|335357124|ref|ZP_08548994.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
animalis KCTC 3501]
Length = 411
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/303 (57%), Positives = 224/303 (73%), Gaps = 23/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI L+++VIGQE+AKK L+VAVYNHY RI + + D DDDT
Sbjct: 62 PTPKEIVDILNQYVIGQEQAKKTLAVAVYNHYKRI--------------NASFDTADDDT 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 108 -ELQKSNICLVGPTGSGKTFLAQSLAKILNVPFTIADATTLTEAGYVGEDVENILLKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V AQ+GIVYIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGTV NVP +G
Sbjct: 167 NADYDVERAQRGIVYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTVANVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + IQIDT +ILFI GGAF IE + R D +IGFGA + +
Sbjct: 227 RKHPQQEFIQIDTTNILFIVGGAFDGIETIVKNRLGDKTIGFGADSKQSYDE-------- 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ S+M+ + DL+ +GLIPEF+GR P+L +L L+E+ LV++LTEPKNAL KQY K+ +
Sbjct: 279 SKSIMQQIIPEDLLKFGLIPEFIGRLPILTALEKLSEDDLVRILTEPKNALVKQYSKLLE 338
Query: 566 MNG 568
+G
Sbjct: 339 FDG 341
>gi|395493606|ref|ZP_10425185.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26617]
gi|404253933|ref|ZP_10957901.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26621]
Length = 422
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 180/302 (59%), Positives = 222/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ+RAK+VLSVAV+NHY R+ + QK G D
Sbjct: 65 PTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNH--GQK------------GAD--- 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLMGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF IEK I +R Q SIGFGA V + +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGIEKIIGDRLQGKSIGFGAYVAS-------PEERR 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PV+ +L L LV +LTEPKNAL KQY+K+F
Sbjct: 281 TGETLKAVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNALVKQYQKLFD 340
Query: 566 MN 567
M
Sbjct: 341 ME 342
>gi|416156276|ref|ZP_11604408.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 101P30B1]
gi|416220782|ref|ZP_11625591.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 103P14B1]
gi|421779132|ref|ZP_16215626.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis RH4]
gi|326565912|gb|EGE16073.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 103P14B1]
gi|326575438|gb|EGE25363.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 101P30B1]
gi|407813573|gb|EKF84353.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis RH4]
Length = 438
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 218/308 (70%), Gaps = 21/308 (6%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L P PKE+ LD +VIGQ+ AKK L+VAVYNHY R+ D
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRL--------------KVANDK 127
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VEL KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 128 KDTDGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIV 187
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL SDY+V A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV N+
Sbjct: 188 QKLLQASDYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANI 247
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHPR + IQ+DT +IL I GGAF ++K I +R + + IGF A V+A
Sbjct: 248 PPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQ------ 301
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D + L VE+ DLI +GLIPE +GR PV+ SL L E LVQ+LTEPKNAL KQY
Sbjct: 302 -DESSITELFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQY 360
Query: 561 RKMFQMNG 568
+ +F M G
Sbjct: 361 QYLFDMEG 368
>gi|226953944|ref|ZP_03824408.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ATCC 27244]
gi|226835298|gb|EEH67681.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ATCC 27244]
Length = 436
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/314 (55%), Positives = 225/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ AG+S
Sbjct: 53 GDWASKPL----PKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL--------KAGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
G +E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 ------GHTHKEIEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D+ S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 K------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFTME 342
>gi|393769362|ref|ZP_10357886.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. GXF4]
gi|392725261|gb|EIZ82602.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. GXF4]
Length = 423
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ+ AKKVLSVAV+NHY R+ + + +
Sbjct: 64 PTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHATKH-----------------ND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS+R + +SIGFGA V+A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA-------PDDRR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + +VE DL+ +GLIPEFVGR PVL +L L E L ++L EPKNAL KQY+++F+
Sbjct: 280 TGEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALKKILQEPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|86137327|ref|ZP_01055904.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp. MED193]
gi|85825662|gb|EAQ45860.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp. MED193]
Length = 422
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 227/302 (75%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+PK+IC+ LD +VIGQ AKKVLSVAV+NHY R+ + + AG +
Sbjct: 64 PSPKDICEVLDDYVIGQAMAKKVLSVAVHNHYKRL----NHAQKAG------------ND 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + S++GFGA VR N G
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRNNDDRG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 281 VGEIFQELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|344943166|ref|ZP_08782453.1| ATP-dependent Clp protease ATP-binding subunit clpX [Methylobacter
tundripaludum SV96]
gi|344260453|gb|EGW20725.1| ATP-dependent Clp protease ATP-binding subunit clpX [Methylobacter
tundripaludum SV96]
Length = 424
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 169/307 (55%), Positives = 223/307 (72%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G + P PKEI + LD +VIGQE AKK+L+VAVYNHY R+ ++S +
Sbjct: 62 GGELPKPKEIKEELDSYVIGQENAKKILAVAVYNHYKRLRSKSKK--------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DTVEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DTVELAKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
K+L DY+V A+ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 165 KILQKCDYDVEKAESGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q++T +ILFI GGAF +++ I +R + IGF A ++ + +
Sbjct: 225 PQGGRKHPQQEFLQVNTANILFIVGGAFAGLDRVIKDRSEKGGIGFSAEIKTKDESKNI- 283
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
L VE+ DLI YGLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY+
Sbjct: 284 -----GQLFAEVEAEDLIKYGLIPEFVGRLPVIATLEELDEKALVQILTEPKNALIKQYK 338
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 339 HLFEMEG 345
>gi|296112318|ref|YP_003626256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis RH4]
gi|295920012|gb|ADG60363.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis BBH18]
Length = 438
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 218/308 (70%), Gaps = 21/308 (6%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L P PKE+ LD +VIGQ+ AKK L+VAVYNHY R+ D
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRL--------------KVANDK 127
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VEL KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 128 KDTDGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIV 187
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL +DY+V A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV N+
Sbjct: 188 QKLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANI 247
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHPR + IQ+DT +IL I GGAF ++K I +R + + IGF A V+A
Sbjct: 248 PPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQ------ 301
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D + L VE+ DLI +GLIPE +GR PVL SL L E LVQ+LTEPKNAL KQY
Sbjct: 302 -DESSITELFREVEAEDLIKFGLIPELIGRLPVLASLEELDEAALVQILTEPKNALVKQY 360
Query: 561 RKMFQMNG 568
+ +F M G
Sbjct: 361 QYLFDMEG 368
>gi|300715592|ref|YP_003740395.1| ATP-dependent Clp protease ATP-binding protein ClpX [Erwinia
billingiae Eb661]
gi|299061428|emb|CAX58540.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Erwinia
billingiae Eb661]
Length = 424
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVDTGTGIGFGATVK------GTAEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+E VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGQLLEQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|237653229|ref|YP_002889543.1| ATP-dependent protease ATP-binding subunit ClpX [Thauera sp. MZ1T]
gi|237624476|gb|ACR01166.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thauera sp.
MZ1T]
Length = 422
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 174/315 (55%), Positives = 222/315 (70%), Gaps = 23/315 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G G + PTP EIC LD++VIGQ AK+ L+VAVYNHY R+ + +++
Sbjct: 53 GAEDGEGIKGTLPTPHEICSILDQYVIGQSLAKRSLAVAVYNHYKRLRHLDARQ------ 106
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVG
Sbjct: 107 ----------DDVELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVG 156
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL DY+V AQQGI+YIDE+DKI++KA++ +I+RDVSGEGVQQALLK++
Sbjct: 157 EDVENIVQKLLQKCDYDVDKAQQGIIYIDEIDKISRKADNPSITRDVSGEGVQQALLKLV 216
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP D IQ+DT ++LFICGGAF +EK I R + IGFGA V++
Sbjct: 217 EGTVASIPPQGGRKHPNQDFIQVDTTNVLFICGGAFDGLEKVIRNRTEKVGIGFGAEVKS 276
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+TD VE DLI +GLIPE +GR PV+ +L L E L+Q+L EPK
Sbjct: 277 K-EGKNLTDT------FRQVEPEDLIKFGLIPELIGRLPVVATLQELDEAALIQILIEPK 329
Query: 554 NALGKQYRKMFQMNG 568
NAL KQY+K+F M G
Sbjct: 330 NALVKQYQKLFSMEG 344
>gi|294651551|ref|ZP_06728860.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|292822574|gb|EFF81468.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 436
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 174/314 (55%), Positives = 225/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ AG+S
Sbjct: 53 GDWASKPL----PKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL--------KAGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
G +E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 ------GHTHKEIEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D+ S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 K------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFTME 342
>gi|445423514|ref|ZP_21436679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
sp. WC-743]
gi|444755551|gb|ELW80131.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
sp. WC-743]
Length = 436
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 223/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ + +
Sbjct: 53 GDWASRPL----PKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQTGHKPK--- 105
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 106 ----------DAVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIIQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQ+DT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKN 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 276 K------DDTKKVSELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F+M
Sbjct: 330 NALTRQYQYLFEME 343
>gi|296116538|ref|ZP_06835148.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
hansenii ATCC 23769]
gi|295976750|gb|EFG83518.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
hansenii ATCC 23769]
Length = 419
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 227/301 (75%), Gaps = 24/301 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ AKKVLSVAV+NHY R+ + SQK ++
Sbjct: 63 PTPREICNILDDYVIGQMHAKKVLSVAVHNHYKRLAH--SQK---------------NND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + S IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS-------PDDRR 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ +E DL+ +GLIPEF+GR PVL +L L E L+++LT+PKNAL KQY ++FQ
Sbjct: 279 TGAILRDIEPEDLLKFGLIPEFIGRLPVLATLEDLDEAALIEILTKPKNALVKQYARLFQ 338
Query: 566 M 566
M
Sbjct: 339 M 339
>gi|170751515|ref|YP_001757775.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
radiotolerans JCM 2831]
gi|238688765|sp|B1LW29.1|CLPX_METRJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|170658037|gb|ACB27092.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium radiotolerans JCM 2831]
Length = 423
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ+ AKKVLSVAV+NHY R+ + + +
Sbjct: 64 PTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHATKH-----------------ND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS+R + +SIGFGA V+A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGATVQA-------PDDRR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + +VE DL+ +GLIPEFVGR PVL +L L E L ++L EPKNAL KQY+++F+
Sbjct: 280 TGEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALKKILQEPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|92117751|ref|YP_577480.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrobacter
hamburgensis X14]
gi|122417675|sp|Q1QL77.1|CLPX_NITHX RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91800645|gb|ABE63020.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrobacter
hamburgensis X14]
Length = 424
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LT+PKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|422023826|ref|ZP_16370328.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
sneebia DSM 19967]
gi|414091841|gb|EKT53522.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
sneebia DSM 19967]
Length = 363
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 225/305 (73%), Gaps = 23/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 64 LPTPHEIREHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTTS--------E 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R S IGF A V+ G ++
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNTHSGIGFAAEVK------GESEK 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 282 ATEGALLAQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNALTKQYQAL 341
Query: 564 FQMNG 568
F + G
Sbjct: 342 FSLEG 346
>gi|85716434|ref|ZP_01047406.1| ATP-dependent protease ATP-binding subunit [Nitrobacter sp.
Nb-311A]
gi|85696791|gb|EAQ34677.1| ATP-dependent protease ATP-binding subunit [Nitrobacter sp.
Nb-311A]
Length = 400
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 39 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQTKH-----------------N 81
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 82 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 141
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 142 QSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 201
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 202 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG---- 257
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++LT+PKNAL KQY++
Sbjct: 258 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQR 312
Query: 563 MFQMN 567
+F+M
Sbjct: 313 LFEME 317
>gi|221068423|ref|ZP_03544528.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Comamonas
testosteroni KF-1]
gi|299533086|ref|ZP_07046472.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni S44]
gi|418531530|ref|ZP_13097444.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni ATCC 11996]
gi|220713446|gb|EED68814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Comamonas
testosteroni KF-1]
gi|298718971|gb|EFI59942.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni S44]
gi|371451484|gb|EHN64522.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni ATCC 11996]
Length = 420
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 220/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AK+ L+VAVYNHY R+ + K AG+ D
Sbjct: 64 LPTPAEIKANLDNYVIGQEQAKRTLAVAVYNHYKRL----NHKDKAGK-----------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASIPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFIC GAF +EK I R + S IGFGA V++ +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICSGAFAGLEKVIENRTEASGIGFGATVKSKKQRS------ 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S + +E DLI +G+IPE VGR PV+ +L L+E LVQ+LTEPKNAL KQY K+
Sbjct: 283 -ISEMFLEIEPEDLIKFGIIPELVGRMPVVTALAELSEEALVQILTEPKNALVKQYSKLL 341
Query: 565 QMNG 568
M G
Sbjct: 342 AMEG 345
>gi|399992449|ref|YP_006572689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657004|gb|AFO90970.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 422
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 225/302 (74%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 64 PTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRL----NHAQKAGSD------------ 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I +R + S++GFGA VR + AG
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ L+ +LT+PKNAL KQY+++F+
Sbjct: 281 VGETFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|400754135|ref|YP_006562503.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis 2.10]
gi|398653288|gb|AFO87258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis 2.10]
Length = 422
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 225/302 (74%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 64 PTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRL----NHAQKAGSD------------ 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I +R + S++GFGA VR + AG
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ L+ +LT+PKNAL KQY+++F+
Sbjct: 281 VGETFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|254477070|ref|ZP_05090456.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria sp.
R11]
gi|214031313|gb|EEB72148.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria sp.
R11]
Length = 422
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 225/302 (74%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + + AG +
Sbjct: 64 PTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRL----NHAQKAG------------ND 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I +R + S++GFGA VR AG
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREESDAG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ L+ +LT+PKNAL KQY+++F+
Sbjct: 281 VGETFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|149916366|ref|ZP_01904886.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
AzwK-3b]
gi|149809820|gb|EDM69672.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
AzwK-3b]
Length = 420
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 175/308 (56%), Positives = 227/308 (73%), Gaps = 26/308 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++IC LD +VIGQ AK+VLSVAV+NHY R+ N S + +
Sbjct: 64 PTPQDICAVLDDYVIGQSMAKRVLSVAVHNHYKRL-NHSGK-----------------ND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 166 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ IS+R + S++GFGA VR DA
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISQRGKGSAMGFGADVRD-------VDARN 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + + +E DL+ +GLIPEFVGR PV+ +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 279 TGEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTEPKNALIKQYQRLFE 338
Query: 566 M-NGQAAF 572
+ N Q F
Sbjct: 339 LENAQLTF 346
>gi|406837289|ref|ZP_11096883.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus vini
DSM 20605]
Length = 415
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 221/303 (72%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P EI L+++VIGQE+AKK L+VAVYNHY RI +E +Q DD
Sbjct: 62 PKPHEIVNILNQYVIGQEQAKKTLAVAVYNHYKRISSELNQ----------------DDE 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 106 TELQKSNICLVGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V AQ+GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 166 NADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + IQ+DT +ILFI GGAF IE+ + R D +IGFGA +
Sbjct: 226 RKHPQQEFIQLDTTNILFIVGGAFDGIEEIVKRRLGDQTIGFGATAENKLDE-------- 277
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ SLM+ + DL+ +GLIPEF+GR P+L +L LTE LV++LTEPKNAL KQY K+ +
Sbjct: 278 SKSLMQQIIPEDLLKFGLIPEFIGRLPILTALEKLTEGDLVRILTEPKNALVKQYAKLMK 337
Query: 566 MNG 568
M+G
Sbjct: 338 MDG 340
>gi|329889320|ref|ZP_08267663.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta ATCC 11568]
gi|328844621|gb|EGF94185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta ATCC 11568]
Length = 422
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI LD +VIGQ AKKVLSVAV+NHY R+ + + ++
Sbjct: 64 PTPKEIRDVLDDYVIGQSHAKKVLSVAVHNHYKRLNHATK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFI GGAF +EK IS R + +SIGFGA V+ D
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGEGASIGFGAKVKE-------IDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ VE DL+ +GLIPEF+GR PVL +L L E L+++LTEPKNAL KQY+++F+
Sbjct: 280 TGEILKQVEPDDLMRFGLIPEFIGRLPVLATLEDLDEVALIKILTEPKNALVKQYKRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|313891580|ref|ZP_07825190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
microaerophilus UPII 345-E]
gi|313120039|gb|EFR43221.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
microaerophilus UPII 345-E]
Length = 411
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/304 (55%), Positives = 227/304 (74%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP EI K +D++VI QE AK L+VAVYNHY RI E DG +D
Sbjct: 60 KLPTPVEIKKYMDQYVIDQEEAKIALAVAVYNHYKRIKYEK--------------DGGND 105
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNI+++GPTGSGKTLLA+TLAR+++VPF I+DATTLT+AGYVGEDVE+IL +L
Sbjct: 106 D-VELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRL 164
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV NVP +
Sbjct: 165 IQAADYDLEKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQ 224
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQ+DT ILFICGGAF ++K +++R S++GFGA ++
Sbjct: 225 GGRKHPNQEMIQLDTSKILFICGGAFAGMDKVVAKRLTKSAVGFGADIKKKEEKD----- 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ ++ VE DL+ +GLIPEF+GR P+LV+L L+E+ LV++LT+PKNAL KQY+K+
Sbjct: 280 --VAKILNMVEPEDLLKFGLIPEFIGRLPILVALSPLSEDALVRILTQPKNALIKQYKKL 337
Query: 564 FQMN 567
+M+
Sbjct: 338 LKMD 341
>gi|386287808|ref|ZP_10064979.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium BDW918]
gi|385279318|gb|EIF43259.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium BDW918]
Length = 424
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 174/306 (56%), Positives = 221/306 (72%), Gaps = 22/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP+EI LD++VIGQ RAKKVL+VAVYNHY R+ GE
Sbjct: 63 DKLPTPQEINHTLDQYVIGQVRAKKVLAVAVYNHYKRL--------RVGEKGK------- 107
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DDIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 167 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF +++ I +R + IGF A V++ A V
Sbjct: 227 QGGRKHPQQEFLQVDTSNILFICGGAFAGLDRVIRDRSEKGGIGFSAEVKSKSEARNV-- 284
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ VE DL+ YGLIPEFVGR PV+ +L L + LV +LTEPKNAL KQY K
Sbjct: 285 ----GEILADVEPDDLVRYGLIPEFVGRLPVIATLEELDIDALVSILTEPKNALTKQYSK 340
Query: 563 MFQMNG 568
+F M G
Sbjct: 341 LFDMEG 346
>gi|375106290|ref|ZP_09752551.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Burkholderiales bacterium JOSHI_001]
gi|374667021|gb|EHR71806.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Burkholderiales bacterium JOSHI_001]
Length = 421
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 221/306 (72%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI LD++VIGQE AK+ LSVAVYNHY R+ K G+
Sbjct: 64 SELPTPSEIKLSLDQYVIGQEAAKRTLSVAVYNHYKRL------KHLGGK---------- 107
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DDVELTKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +Y+V AQ+GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQNCNYDVDRAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V +
Sbjct: 227 QGGRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQNRTEKSGIGFGASVHSKTEKRA--- 283
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ + E D+I +GLIPE VGR PV+ +L LTE ++Q+LTEPKNAL KQY+K
Sbjct: 284 ----ADVFRDAEPEDMIKFGLIPELVGRLPVVATLGELTEEAMIQILTEPKNALVKQYQK 339
Query: 563 MFQMNG 568
+F M+G
Sbjct: 340 LFSMDG 345
>gi|310829090|ref|YP_003961447.1| ATP-dependent Clp protease ATP-binding subunit clpX [Eubacterium
limosum KIST612]
gi|308740824|gb|ADO38484.1| ATP-dependent Clp protease ATP-binding subunit clpX [Eubacterium
limosum KIST612]
Length = 421
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 171/310 (55%), Positives = 223/310 (71%), Gaps = 23/310 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD++VI Q RAK+ L+VAVYNHY RI + D DD
Sbjct: 61 PTPREIKAKLDEYVISQHRAKRALAVAVYNHYKRI--------------NAMLDS--DDD 104
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL+KSNI+L+GPTGSGKTLLA+TLAR ++VPF IADAT+LT+AGYVGEDVE+IL KLL
Sbjct: 105 VELQKSNIILIGPTGSGKTLLAQTLARVLDVPFAIADATSLTEAGYVGEDVENILLKLLQ 164
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+D +V AQ+GI+YIDE+DKI++K+++ +I+RDVSGEGVQQALLK+LEGTV NVP +G
Sbjct: 165 AADMDVERAQKGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKILEGTVANVPPQGG 224
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + IQ+DT +ILFICGGAF ++ I R + S+GF A ++ +D
Sbjct: 225 RKHPHQEFIQLDTSNILFICGGAFDGMDGVIERRMEKGSMGFSATIKT-------SDEKA 277
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L++ +E DL+ YGLIPEF+GR PV+ +L L E L+ +LTEPKNAL KQY+KMF+
Sbjct: 278 KEELLDNIEPQDLLKYGLIPEFIGRIPVIATLQNLDEEALINILTEPKNALVKQYKKMFE 337
Query: 566 MNGQAAFYGK 575
+ G A + K
Sbjct: 338 IEGVALEFEK 347
>gi|372279705|ref|ZP_09515741.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanicola sp.
S124]
Length = 421
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 176/302 (58%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEIC LD +VIGQ AK+VLSVAV+NHY R+ N S++ G D
Sbjct: 64 PTPKEICAVLDDYVIGQATAKRVLSVAVHNHYKRL-NHSAK-------------GGD--- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 SSEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I+ R + S++GFGA VR N DA
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN-------DARG 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PVL +L L LV +LTEPKNAL KQY+++F+
Sbjct: 280 VGEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDAEALVTILTEPKNALVKQYQRLFE 339
Query: 566 MN 567
+
Sbjct: 340 LE 341
>gi|334141357|ref|YP_004534563.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium sp. PP1Y]
gi|359397993|ref|ZP_09191017.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium pentaromativorans US6-1]
gi|333939387|emb|CCA92745.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium sp. PP1Y]
gi|357600411|gb|EHJ62106.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium pentaromativorans US6-1]
Length = 420
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 176/317 (55%), Positives = 225/317 (70%), Gaps = 26/317 (8%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
+K G G + G P+P+EIC+ L+ +VIGQ+RAK+VLSVAV+NHY R+ + Q
Sbjct: 52 TKAGIAGKKDGG--VPSPREICETLNDYVIGQDRAKRVLSVAVHNHYKRLKHSGKQ---- 105
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
VEL KSNILL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+AG
Sbjct: 106 -------------GDVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEAG 152
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+I+ KLL SDYNV AQ GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALL
Sbjct: 153 YVGEDVENIILKLLQASDYNVEKAQHGIVYIDEIDKISRKAENPSITRDVSGEGVQQALL 212
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I++R Q SIGFGA
Sbjct: 213 KLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIADRLQKRSIGFGAH 272
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
V D L++ E DL+ +GLIPEFVGR PV+ +L L LV++L
Sbjct: 273 V-------ADPDKRRVGELLQKSEPEDLLKFGLIPEFVGRLPVIATLEDLDIAALVKILK 325
Query: 551 EPKNALGKQYRKMFQMN 567
EPKNAL KQYRK+F++
Sbjct: 326 EPKNALIKQYRKLFELE 342
>gi|170744619|ref|YP_001773274.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. 4-46]
gi|238688059|sp|B0UD19.1|CLPX_METS4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|168198893|gb|ACA20840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium sp. 4-46]
Length = 423
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ+ AKKVLSVAV+NHY R+ + + +
Sbjct: 64 PTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAAKH-----------------ND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGFGA V+A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA-------PDDRR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + VE DL+ +GLIPEFVGR PVL +L L E L ++L EPKNAL KQY+++F+
Sbjct: 280 TGEIFRAVEPEDLLKFGLIPEFVGRLPVLATLEDLDETALKRILQEPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|418055592|ref|ZP_12693646.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hyphomicrobium
denitrificans 1NES1]
gi|353209870|gb|EHB75272.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hyphomicrobium
denitrificans 1NES1]
Length = 415
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ AK+VLSVAV+NHY R+ + + ++
Sbjct: 59 PTPQEICNVLDSYVIGQFHAKRVLSVAVHNHYKRLNHATK-----------------NND 101
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 162 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + SSIGF A V D
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFSAKVTG-------PDERR 274
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E LVQ+LTEPKNA+ KQY+++F+
Sbjct: 275 TGDILRGVEPEDLLKFGLIPEFIGRLPVIATLEDLDEAALVQILTEPKNAIVKQYQRLFE 334
Query: 566 MN 567
M
Sbjct: 335 ME 336
>gi|170727452|ref|YP_001761478.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella woodyi
ATCC 51908]
gi|238688691|sp|B1KLT6.1|CLPX_SHEWM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169812799|gb|ACA87383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
woodyi ATCC 51908]
Length = 426
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 224/306 (73%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQE+AKKVLSVAVYNHY R+ N +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNAGPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILF+CGGAF +EK I +R + IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFVCGGAFSGLEKVIEQRSHTGTGIGFGAQVK-----GEDD 280
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
A ++ +LM+ VE DL+ YGLIPEF+GR PVL +L L + L+Q+L+EPKNAL KQ+
Sbjct: 281 KATISDTLMQ-VEPEDLVKYGLIPEFIGRLPVLATLAELDDAALIQILSEPKNALTKQFA 339
Query: 562 KMFQMN 567
+F+M
Sbjct: 340 ALFEME 345
>gi|192361200|ref|YP_001982471.1| ATP-dependent protease ATP-binding subunit ClpX [Cellvibrio
japonicus Ueda107]
gi|238692439|sp|B3PHK5.1|CLPX_CELJU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|190687365|gb|ACE85043.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cellvibrio
japonicus Ueda107]
Length = 433
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 227/309 (73%), Gaps = 25/309 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI-YNESSQKRSAGESSSCTTDGV 321
+K P P EI LD++VIGQ+RAKKVL+VAVYNHY R+ + + + K
Sbjct: 65 DKLPKPHEISAILDQYVIGQKRAKKVLAVAVYNHYKRLRFGDKTAK-------------- 110
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D + VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+
Sbjct: 111 DKEPVELGKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQ 170
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 171 KLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP 230
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGG 499
+G RKHP+ + +Q+DT +ILFICGGAF ++K I +R + IGF A V++ + R G
Sbjct: 231 PQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFAAEVKSKDDKRNFG 290
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
T + +E DL+ YGLIPEFVGR PV+ +L L + L+Q+LTEPKNAL KQ
Sbjct: 291 ET--------LHDLEPEDLVRYGLIPEFVGRLPVIATLDELDKAALIQILTEPKNALTKQ 342
Query: 560 YRKMFQMNG 568
Y K+F+M G
Sbjct: 343 YGKLFEMEG 351
>gi|416243367|ref|ZP_11633888.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC7]
gi|326569250|gb|EGE19311.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC7]
Length = 438
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 218/308 (70%), Gaps = 21/308 (6%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L P PKE+ LD +VIGQ+ AKK L+VAVYNHY R+ D
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRL--------------KVANDK 127
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VEL KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 128 KDTDGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIV 187
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL +DY+V A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV N+
Sbjct: 188 QKLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANI 247
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHPR + IQ+DT +IL I GGAF ++K I +R + + IGF A V+A
Sbjct: 248 PPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQ------ 301
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D + L VE+ DLI +GLIPE +GR PVL SL L E LVQ+LTEPKNAL KQY
Sbjct: 302 -DESSITELFREVEAEDLIKFGLIPELIGRLPVLASLEELDEAALVQILTEPKNALVKQY 360
Query: 561 RKMFQMNG 568
+ +F M G
Sbjct: 361 QYLFDMEG 368
>gi|154706445|ref|YP_001424147.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
Dugway 5J108-111]
gi|189082494|sp|A9KDS7.1|CLPX_COXBN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|154355731|gb|ABS77193.1| ATP-dependent endopeptidase clp ATP-binding subunit [Coxiella
burnetii Dugway 5J108-111]
Length = 422
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 173/312 (55%), Positives = 224/312 (71%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG+ K PTP EI + LD++VIGQE AKKVLSVAVYNHY R+ N++ +
Sbjct: 54 GGAQ--KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKK---------- 101
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D+VE+ KSNILL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDV
Sbjct: 102 -------DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDV 154
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y+V A+ GI+YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGT
Sbjct: 155 ENIIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGT 214
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V ++P +G RKHP+ + +Q+DT +ILFICGGAF D+ K I R IGF A VR
Sbjct: 215 VASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKIGIGFAAEVRPKED 274
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ S L++ E DLI YGLIPEFVGR P++ +L L E+ L+++LTEPKNAL
Sbjct: 275 F-----SREASKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNAL 329
Query: 557 GKQYRKMFQMNG 568
KQYRK+F+ G
Sbjct: 330 VKQYRKLFEFEG 341
>gi|423067860|ref|ZP_17056650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis C1]
gi|406710603|gb|EKD05810.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis C1]
Length = 456
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 225/306 (73%), Gaps = 8/306 (2%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI + LDK VIGQ KKVLSVAVYNHY R+ S + T G D
Sbjct: 77 ELPKPVEIKQYLDKHVIGQNNTKKVLSVAVYNHYKRL---SVDAGNMSNQDFDETQGYSD 133
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL+KSNILLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+IL +L
Sbjct: 134 EQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENILLRL 193
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D+++ AAQQGI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTVVNVP +
Sbjct: 194 LQVADFDIEAAQQGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVNVPPQ 253
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD- 502
G RKHP D IQIDT ILFICGGAFV ++K + +R S+GF P ++ G
Sbjct: 254 GGRKHPYQDFIQIDTSKILFICGGAFVGLDKLVEQRMGKKSLGFIQP---GVKPGEEVQK 310
Query: 503 -AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+V T+ +++ VE DL+ +GLIPEF+GR PVL + L E LV++LTEP NAL KQY+
Sbjct: 311 TSVDTTEILQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNALVKQYK 370
Query: 562 KMFQMN 567
++ +M+
Sbjct: 371 QLLKMD 376
>gi|183601062|ref|ZP_02962555.1| hypothetical protein PROSTU_04685 [Providencia stuartii ATCC 25827]
gi|386742737|ref|YP_006215916.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
stuartii MRSN 2154]
gi|188019402|gb|EDU57442.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
stuartii ATCC 25827]
gi|384479430|gb|AFH93225.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
stuartii MRSN 2154]
Length = 425
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 221/305 (72%), Gaps = 23/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVLSVAVYNHY R+ N T +GV
Sbjct: 64 LPTPHEIREHLDDYVIGQEQAKKVLSVAVYNHYKRLRN-----------GDTTAEGV--- 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 --ELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGF A V+ G +D
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK------GESDK 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 282 ISEGELLTQTEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILQEPKNALTKQYQAL 341
Query: 564 FQMNG 568
F + G
Sbjct: 342 FSLEG 346
>gi|422016475|ref|ZP_16363058.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
burhodogranariea DSM 19968]
gi|414092674|gb|EKT54347.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
burhodogranariea DSM 19968]
Length = 425
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 222/305 (72%), Gaps = 23/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N + K +
Sbjct: 64 LPTPHEIREHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGDTTK----------------E 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGF A V+ G ++
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK------GESEK 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V +L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 282 VTEGALLAQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNALTKQYQAL 341
Query: 564 FQMNG 568
F + G
Sbjct: 342 FSLEG 346
>gi|296446425|ref|ZP_06888369.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylosinus
trichosporium OB3b]
gi|296256060|gb|EFH03143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylosinus
trichosporium OB3b]
Length = 420
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 224/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EICK LD +VIGQ +AK+VLSVAV+NHY R+ + T G
Sbjct: 62 IPTPREICKVLDDYVIGQAQAKRVLSVAVHNHYKRL-------------NHATKHG---- 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 DVELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
SDYNV AQ+GIVY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 165 QASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGFGA V+A D
Sbjct: 225 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRGTSIGFGATVQA-------PDER 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T + V+ DL+ +GLIPEFVGR PV+ +L L E L ++LTEPKNAL KQY+++F
Sbjct: 278 RTGDIFRHVQPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKRILTEPKNALVKQYQRLF 337
Query: 565 QMN 567
+M
Sbjct: 338 EME 340
>gi|99081367|ref|YP_613521.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria sp.
TM1040]
gi|123077615|sp|Q1GGF7.1|CLPX_SILST RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|99037647|gb|ABF64259.1| ATP-dependent Clp protease; ATP-binding subunit ClpX [Ruegeria sp.
TM1040]
Length = 421
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 226/310 (72%), Gaps = 23/310 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + PTPK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 56 GMKATDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRL----NHAQKAG------ 105
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+ +EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 106 ------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVE 159
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 160 NIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTV 219
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFICGGAF ++K I +R + S++GFGA VR A
Sbjct: 220 ASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREESDA 279
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
G +E DL+ +GLIPEFVGR PVL +L L E+ L+ +LT+PKNAL
Sbjct: 280 G-------VGETFRDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALV 332
Query: 558 KQYRKMFQMN 567
KQY+++F++
Sbjct: 333 KQYQRLFELE 342
>gi|410618479|ref|ZP_11329424.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
polaris LMG 21857]
gi|410162021|dbj|GAC33562.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
polaris LMG 21857]
Length = 425
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 173/307 (56%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTPKEI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HDGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFG ++ +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIK------DIN 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L++ VE DL+ YGLIPEF+GR PVL SL L+E+ L+Q+L EPKN+L KQY
Sbjct: 280 NKAKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEDALIQILREPKNSLTKQYA 339
Query: 562 KMFQMNG 568
+F + G
Sbjct: 340 ALFALEG 346
>gi|260892393|ref|YP_003238490.1| ATP-dependent protease ATP-binding subunit ClpX [Ammonifex degensii
KC4]
gi|260864534|gb|ACX51640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ammonifex
degensii KC4]
Length = 420
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 222/304 (73%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEI + LD++VIGQE AKK L+VAVYNHY R++ G D
Sbjct: 61 LPTPKEIKEFLDQYVIGQEHAKKTLAVAVYNHYKRVHL-----------------GGKID 103
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNIL++GPTG GKTLLA+TLAR++NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMLGPTGCGKTLLAQTLARFLNVPFAIADATSLTEAGYVGEDVENILLKLV 163
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ A++GIVYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 164 QAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 223
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILFICGGAF IEK I R S+GFGA +
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIQNRISRKSMGFGAELVVQREQD------ 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ + DL+ +GLIPEFVGR P++V+L LTE+ LV++LTEP+NAL +QY+K+F
Sbjct: 278 -LGKILRQILPQDLLKFGLIPEFVGRLPIIVTLDPLTEDDLVRILTEPRNALIRQYQKLF 336
Query: 565 QMNG 568
+++G
Sbjct: 337 ELDG 340
>gi|399018229|ref|ZP_10720413.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Herbaspirillum sp. CF444]
gi|398101865|gb|EJL92065.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Herbaspirillum sp. CF444]
Length = 421
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 220/304 (72%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD++VIGQ+ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPQEISELLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + K ISER + S IGFGA V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFGANVKSQTQK------- 280
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S ++ E DL+ +GLIPE VGR PV+ +L L E L+Q+L EPKNAL KQY K+
Sbjct: 281 TASEVLLHAEPDDLVKFGLIPELVGRLPVIATLNELNEEALIQILLEPKNALIKQYAKLL 340
Query: 565 QMNG 568
QM G
Sbjct: 341 QMEG 344
>gi|124266486|ref|YP_001020490.1| ATP-dependent protease ATP-binding subunit ClpX [Methylibium
petroleiphilum PM1]
gi|166214784|sp|A2SFB6.1|CLPX_METPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|124259261|gb|ABM94255.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylibium
petroleiphilum PM1]
Length = 423
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 220/305 (72%), Gaps = 23/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV-DD 323
P P EI LD++VIGQE AK+ L+VAVYNHY R+ + GV
Sbjct: 66 LPVPGEIKASLDQYVIGQEPAKRTLAVAVYNHYKRLKH---------------VQGVGKK 110
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KL
Sbjct: 111 EDVELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKL 170
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +Y V AQ+GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 171 LQNCNYEVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQ 230
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++
Sbjct: 231 GGRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQNRSEKSGIGFGASVQSKTERK----- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S + VE DLI +GLIPE VGR PV+ +L LTE+ +VQ+LTEPKNAL KQY+K+
Sbjct: 286 --VSEVFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNALVKQYQKL 343
Query: 564 FQMNG 568
F M+G
Sbjct: 344 FAMDG 348
>gi|329850565|ref|ZP_08265410.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
biprosthecum C19]
gi|328840880|gb|EGF90451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
biprosthecum C19]
Length = 387
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 182/319 (57%), Positives = 232/319 (72%), Gaps = 38/319 (11%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
SKDG PTPKEI + LD +VIGQ +AKKVLSVAV+NHY R+ + +QK
Sbjct: 26 SKDGV----------PTPKEIREVLDDYVIGQSQAKKVLSVAVHNHYKRLNH--AQK--- 70
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
+ VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AG
Sbjct: 71 ------------GNDVELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAG 118
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+I+ KLL +DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 119 YVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALL 178
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K++EGTV +VP +G RKHP+ + +Q+DT +ILFICGGAF +EK IS R + SSIGFGA
Sbjct: 179 KIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGKGSSIGFGAS 238
Query: 491 VR--ANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
V+ + R G V + VE DL+ +GLIPEF+GR PVL +L L E LV++
Sbjct: 239 VKDPEDRRTGEV---------LRDVEPDDLMKFGLIPEFIGRLPVLATLEDLDEVTLVKI 289
Query: 549 LTEPKNALGKQYRKMFQMN 567
LTEPKNAL KQY+++F+M
Sbjct: 290 LTEPKNALIKQYQRLFEME 308
>gi|209525223|ref|ZP_03273766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Arthrospira
maxima CS-328]
gi|376002437|ref|ZP_09780270.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Arthrospira sp. PCC 8005]
gi|209494408|gb|EDZ94720.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Arthrospira
maxima CS-328]
gi|375329177|emb|CCE16023.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Arthrospira sp. PCC 8005]
Length = 456
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 225/306 (73%), Gaps = 8/306 (2%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI + LDK VIGQ KKVLSVAVYNHY R+ S + T G D
Sbjct: 77 ELPKPVEIKQYLDKHVIGQNNTKKVLSVAVYNHYKRL---SVDAGNISNQDFDETQGYSD 133
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL+KSNILLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+IL +L
Sbjct: 134 EQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENILLRL 193
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D+++ AAQQGI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTVVNVP +
Sbjct: 194 LQVADFDIEAAQQGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVNVPPQ 253
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD- 502
G RKHP D IQIDT ILFICGGAFV ++K + +R S+GF P ++ G
Sbjct: 254 GGRKHPYQDFIQIDTSKILFICGGAFVGLDKLVEQRMGKKSLGFIQP---GVKPGEEVQK 310
Query: 503 -AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+V T+ +++ VE DL+ +GLIPEF+GR PVL + L E LV++LTEP NAL KQY+
Sbjct: 311 TSVDTTEILQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNALVKQYK 370
Query: 562 KMFQMN 567
++ +M+
Sbjct: 371 QLLKMD 376
>gi|171463606|ref|YP_001797719.1| ATP-dependent protease ATP-binding subunit ClpX [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|226706593|sp|B1XUS8.1|CLPX_POLNS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|171193144|gb|ACB44105.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 453
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 176/317 (55%), Positives = 224/317 (70%), Gaps = 18/317 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTP +I K LD++VIGQ+ AKK L+VAVYNHY R+ K+ + +G D
Sbjct: 63 DSLPTPHQIRKNLDQYVIGQDHAKKTLAVAVYNHYKRLQYLPKPKKEKLDKDGKPVEGSD 122
Query: 323 D-----------DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGY
Sbjct: 123 KKESKLPAKAMVDDVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGY 182
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
VGEDVE+I+ KLL DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 183 VGEDVENIIQKLLQACDYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 242
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV 491
++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R + IGF A V
Sbjct: 243 LVEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIQQRTAKTGIGFNATV 302
Query: 492 RANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTE 551
G D V+ L+E VE DLI +GLIPE +GR PV+ +L L E L+Q+LTE
Sbjct: 303 ------PGKDDRGVSDLLIE-VEPEDLIKFGLIPELIGRLPVVATLAQLDEEALIQILTE 355
Query: 552 PKNALGKQYRKMFQMNG 568
PKNAL KQY+ + M G
Sbjct: 356 PKNALVKQYQALLTMEG 372
>gi|71276512|ref|ZP_00652787.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Dixon]
gi|170729733|ref|YP_001775166.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
M12]
gi|238687959|sp|B0U5N2.1|CLPX_XYLFM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71162689|gb|EAO12416.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Dixon]
gi|167964526|gb|ACA11536.1| ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa M12]
Length = 426
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 226/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQ+RAK+ L+VAVYNHY RI ES K +D
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRI--ESRHK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R ++ IGFG V+++ V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSSESKRDV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E+ LV++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|212709198|ref|ZP_03317326.1| hypothetical protein PROVALCAL_00231 [Providencia alcalifaciens DSM
30120]
gi|422019640|ref|ZP_16366183.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
alcalifaciens Dmel2]
gi|212688110|gb|EEB47638.1| hypothetical protein PROVALCAL_00231 [Providencia alcalifaciens DSM
30120]
gi|414102746|gb|EKT64336.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
alcalifaciens Dmel2]
Length = 425
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 173/307 (56%), Positives = 224/307 (72%), Gaps = 23/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+ +S
Sbjct: 62 SELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDKTS------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGF A V+ G +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAQVK------GES 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+
Sbjct: 280 EKATEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNALTKQYQ 339
Query: 562 KMFQMNG 568
+F + G
Sbjct: 340 ALFNLEG 346
>gi|338707313|ref|YP_004661514.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294117|gb|AEI37224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 422
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD++VIGQ +AK+VLSVAV+NHY R+ + G D
Sbjct: 64 PTPQEICTILDQYVIGQNKAKRVLSVAVHNHYKRLNH-----------------GGKDAD 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + SIGFGA V + D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAS-------PDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ E DL+ +GLIPEFVGR PVL +L L E LV++LTEP+NAL KQY+K+F+
Sbjct: 280 TGKILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVRILTEPRNALVKQYQKLFE 339
Query: 566 MN 567
+
Sbjct: 340 LE 341
>gi|329908484|ref|ZP_08274874.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Oxalobacteraceae bacterium IMCC9480]
gi|327546711|gb|EGF31662.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Oxalobacteraceae bacterium IMCC9480]
Length = 422
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 223/306 (72%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP+EIC+ L ++VIGQ+ AK++LSVAVYNHY R+ R G+
Sbjct: 63 SELPTPQEICELLGQYVIGQDGAKRILSVAVYNHYKRL-------RHLGKK--------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DDVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQACNYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D +QIDT +I+FICGGAF + K +S R + S IGF A V++
Sbjct: 226 QGGRKHPNQDFVQIDTTNIMFICGGAFDGLAKIVSNRSEKSGIGFSASVKSQSERSA--- 282
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
S ++ E DLI +GLIPE VGR PV+ +L LTE+ ++Q+L EPKNAL KQY +
Sbjct: 283 ----SEMLLEAEPEDLIKFGLIPELVGRLPVVATLSELTEDAMIQILLEPKNALIKQYAR 338
Query: 563 MFQMNG 568
+ QM G
Sbjct: 339 LLQMEG 344
>gi|403051410|ref|ZP_10905894.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
bereziniae LMG 1003]
Length = 436
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 223/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ + +
Sbjct: 53 GDWATRPL----PKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQTGHKPK--- 105
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 106 ----------DAVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIIQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQ+DT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKN 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 276 K------DDTKKVSELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F+M
Sbjct: 330 NALTRQYQYLFEME 343
>gi|27363511|ref|NP_759039.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio vulnificus
CMCP6]
gi|37679289|ref|NP_933898.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio vulnificus
YJ016]
gi|320156968|ref|YP_004189347.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
vulnificus MO6-24/O]
gi|31340018|sp|Q8DG27.1|CLPX_VIBVU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|46576400|sp|Q7MMG6.1|CLPX_VIBVY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|27359627|gb|AAO08566.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
vulnificus CMCP6]
gi|37198032|dbj|BAC93869.1| ATP-dependent Clp protease, ATPase subunit [Vibrio vulnificus
YJ016]
gi|319932280|gb|ADV87144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
vulnificus MO6-24/O]
Length = 426
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 23/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S D
Sbjct: 65 LPTPREIRAHLDDYVIGQDHAKKVLAVAVYNHYKRLRN--------GDTTS--------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ + V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKDESKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV SL L E L+Q+L +PKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTASLTELDEEALIQILCQPKNALTKQYAAL 342
Query: 564 FQMNG 568
F++ G
Sbjct: 343 FELEG 347
>gi|119384011|ref|YP_915067.1| ATP-dependent protease ATP-binding subunit ClpX [Paracoccus
denitrificans PD1222]
gi|166214797|sp|A1B1H7.1|CLPX_PARDP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119373778|gb|ABL69371.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Paracoccus
denitrificans PD1222]
Length = 421
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 228/306 (74%), Gaps = 25/306 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+ PTP+EIC LD +VIGQE AK+VLSVAV+NHY R+ N SS+ TD
Sbjct: 60 GDGVPTPREICNVLDDYVIGQEHAKRVLSVAVHNHYKRL-NHSSK-----------TD-- 105
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 106 ----IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIIL 161
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 162 KLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP 221
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT +ILFICGGAF +++ I++R + +++GFGA V+ + G
Sbjct: 222 PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGAAVKEDDDKG--- 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
L + +E DL+ +GLIPEFVGR PV+ +L L E L+ +LT+PKNAL KQY+
Sbjct: 279 ----VGELFKQLEPEDLLKFGLIPEFVGRLPVIATLGDLDEQALITILTQPKNALVKQYQ 334
Query: 562 KMFQMN 567
++F +
Sbjct: 335 RLFDLE 340
>gi|260426453|ref|ZP_05780432.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citreicella
sp. SE45]
gi|260420945|gb|EEX14196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citreicella
sp. SE45]
Length = 421
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EIC LD +VIGQ AK+VLSVAV+NHY R+ + SQK S
Sbjct: 64 PSPREICDVLDDYVIGQMMAKRVLSVAVHNHYKRLNH--SQKSS---------------D 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + S++GFGA VR G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVREPDERG------- 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + + +E DL+ +GLIPEFVGR PV+ +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 280 TGEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|350562400|ref|ZP_08931234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349779342|gb|EGZ33688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 425
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 226/314 (71%), Gaps = 27/314 (8%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G + P P+EI LD++VIGQ+ AKK+LSVAVYNHY R+ +S +
Sbjct: 56 AGHTERDSLPKPREIRAILDEYVIGQDSAKKILSVAVYNHYKRLEAKSGK---------- 105
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDV
Sbjct: 106 -------DDVELSKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDV 158
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL SDY+V A+ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 159 ENIIQKLLQKSDYDVEKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 218
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--N 494
+VP +G RKHP+ + +Q+DT++ILFICGGAF +EK I +R + IGF A VR+
Sbjct: 219 TASVPPQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSEKGGIGFSAEVRSKDK 278
Query: 495 MRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKN 554
R+G S+ ++ +E+ DL+ YGLIPEFVGR PV +L L E LV +LT+P+N
Sbjct: 279 DRSG--------SAWLQRLEAEDLVRYGLIPEFVGRLPVQATLEELDEAALVTILTQPRN 330
Query: 555 ALGKQYRKMFQMNG 568
AL KQY ++F+M G
Sbjct: 331 ALVKQYHRLFEMEG 344
>gi|421662138|ref|ZP_16102306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC110]
gi|421693925|ref|ZP_16133557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-692]
gi|404569764|gb|EKA74849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-692]
gi|408714941|gb|EKL60071.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC110]
Length = 437
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 223/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHASKD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 KDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFNME 342
>gi|387886909|ref|YP_006317208.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
noatunensis subsp. orientalis str. Toba 04]
gi|386871725|gb|AFJ43732.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
noatunensis subsp. orientalis str. Toba 04]
Length = 416
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 219/307 (71%), Gaps = 23/307 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P EI K LD ++IGQ+ AKKVLSVAVYNHY RI T++ D
Sbjct: 55 KLSKPIEIKKYLDNYIIGQDNAKKVLSVAVYNHYKRI----------------TSNTTKD 98
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
DT EL+KSN+LL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+++ +L
Sbjct: 99 DT-ELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENVIVRL 157
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D++VA AQ+GI+YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGTV +VP K
Sbjct: 158 LQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 217
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT DILFICGGAF IEK + R SIGF A V ++
Sbjct: 218 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ------KNS 271
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ T LM VES DL +GLIPE +GR P++ L L E LV++LTEPKNAL KQY K+
Sbjct: 272 LNTEKLMRKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILTEPKNALIKQYVKL 331
Query: 564 FQMNGQA 570
F+ + A
Sbjct: 332 FKFDDVA 338
>gi|294678130|ref|YP_003578745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
capsulatus SB 1003]
gi|294476950|gb|ADE86338.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
capsulatus SB 1003]
Length = 424
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 224/303 (73%), Gaps = 25/303 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++ICK LD +VIGQ AK+VLSVAV+NHY R+ + S Q
Sbjct: 64 PTPRDICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHGSKQD------------------ 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + S+IGFGA V+ G
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAIGFGADVKDPESRGA------ 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L + +E DL+ +GLIPEFVGR PV+ +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 280 -GELFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEAALVTILTEPKNALVKQYQRLFE 338
Query: 566 MNG 568
+ G
Sbjct: 339 IEG 341
>gi|354593925|ref|ZP_09011968.1| clp protease ATP-binding subunit ClpX [Commensalibacter intestini
A911]
gi|353673036|gb|EHD14732.1| clp protease ATP-binding subunit ClpX [Commensalibacter intestini
A911]
Length = 419
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/315 (55%), Positives = 229/315 (72%), Gaps = 25/315 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +Q AG+
Sbjct: 62 LPTPKEICKILDDYVIGQGDAKKVLSVAVHNHYKRL----NQADKAGD------------ 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VE+ KSNI+L+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 -VEIAKSNIMLIGPTGTGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GI+YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 165 QAADYNVERAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT ++LFICGGAF ++K IS R IGFGA V++ D
Sbjct: 225 GRKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARSVGYGIGFGAEVQS-------ADDH 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+L +ES DL+ +GLIPEF+GR PV+ +L L + LVQ+L EPKNAL KQY+K+F
Sbjct: 278 NIGALFRQLESEDLMKFGLIPEFIGRLPVIATLDDLDQEALVQILKEPKNALVKQYQKLF 337
Query: 565 QM-NGQAAFYGKCFE 578
+M N Q F + E
Sbjct: 338 EMENVQLTFEDEAVE 352
>gi|71729634|gb|EAO31738.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Ann-1]
Length = 426
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 225/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQ+RAK+ L+VAVYNHY RI ES K +D
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRI--ESRHK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R + IGFG V+++ V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEVGGIGFGVKVKSSESKRDV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E+ LV++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|169634425|ref|YP_001708161.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii SDF]
gi|169797266|ref|YP_001715059.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AYE]
gi|184156808|ref|YP_001845147.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ACICU]
gi|213155940|ref|YP_002317985.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB0057]
gi|215484707|ref|YP_002326942.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB307-0294]
gi|239500789|ref|ZP_04660099.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB900]
gi|260556148|ref|ZP_05828367.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|301346761|ref|ZP_07227502.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB056]
gi|301512253|ref|ZP_07237490.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB058]
gi|301594242|ref|ZP_07239250.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB059]
gi|332851227|ref|ZP_08433300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013150]
gi|332866081|ref|ZP_08436809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013113]
gi|332873221|ref|ZP_08441178.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6014059]
gi|384130480|ref|YP_005513092.1| clpX [Acinetobacter baumannii 1656-2]
gi|384141765|ref|YP_005524475.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MDR-ZJ06]
gi|385236077|ref|YP_005797416.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii TCDC-AB0715]
gi|387125277|ref|YP_006291159.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii MDR-TJ]
gi|403673395|ref|ZP_10935692.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
NCTC 10304]
gi|407931413|ref|YP_006847056.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii TYTH-1]
gi|416146585|ref|ZP_11601248.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB210]
gi|417548860|ref|ZP_12199941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-18]
gi|417554476|ref|ZP_12205545.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-81]
gi|417559835|ref|ZP_12210714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC137]
gi|417566510|ref|ZP_12217382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC143]
gi|417570410|ref|ZP_12221267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC189]
gi|417571823|ref|ZP_12222677.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC-5]
gi|417577372|ref|ZP_12228217.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-17]
gi|417871121|ref|ZP_12516064.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH1]
gi|417875783|ref|ZP_12520587.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH2]
gi|417879719|ref|ZP_12524275.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH3]
gi|417882117|ref|ZP_12526425.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH4]
gi|421201042|ref|ZP_15658201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC109]
gi|421202631|ref|ZP_15659779.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC12]
gi|421454197|ref|ZP_15903546.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-123]
gi|421533665|ref|ZP_15979946.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC30]
gi|421625769|ref|ZP_16066615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC098]
gi|421630631|ref|ZP_16071332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC180]
gi|421634255|ref|ZP_16074874.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-13]
gi|421642783|ref|ZP_16083294.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-235]
gi|421649346|ref|ZP_16089741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-251]
gi|421650920|ref|ZP_16091292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC0162]
gi|421655156|ref|ZP_16095480.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-72]
gi|421659274|ref|ZP_16099495.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-83]
gi|421675826|ref|ZP_16115745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC065]
gi|421677460|ref|ZP_16117352.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC111]
gi|421688455|ref|ZP_16128155.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-143]
gi|421692612|ref|ZP_16132263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-116]
gi|421698050|ref|ZP_16137594.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-58]
gi|421702212|ref|ZP_16141697.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1122]
gi|421705951|ref|ZP_16145372.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1219]
gi|421789232|ref|ZP_16225494.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-82]
gi|421792386|ref|ZP_16228541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-2]
gi|421798248|ref|ZP_16234273.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-21]
gi|421798785|ref|ZP_16234796.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC1]
gi|421805852|ref|ZP_16241728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-694]
gi|421807882|ref|ZP_16243739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC035]
gi|424053764|ref|ZP_17791295.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab11111]
gi|424061208|ref|ZP_17798698.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab33333]
gi|424064699|ref|ZP_17802183.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab44444]
gi|425749276|ref|ZP_18867256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-348]
gi|425751578|ref|ZP_18869523.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-113]
gi|445400104|ref|ZP_21429754.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-57]
gi|445446824|ref|ZP_21443455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-92]
gi|445465207|ref|ZP_21449985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC338]
gi|445481642|ref|ZP_21456086.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-78]
gi|445486129|ref|ZP_21457187.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AA-014]
gi|226706570|sp|B7H092.1|CLPX_ACIB3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706571|sp|B7I5E4.1|CLPX_ACIB5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238685491|sp|A3M1Y8.2|CLPX_ACIBT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688025|sp|B0V4T7.1|CLPX_ACIBY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688111|sp|B0VKU4.1|CLPX_ACIBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691033|sp|B2I3C2.1|CLPX_ACIBC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169150193|emb|CAM88087.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii AYE]
gi|169153217|emb|CAP02313.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii]
gi|183208402|gb|ACC55800.1| ATP-dependent protease Clp, ATPase subunit [Acinetobacter baumannii
ACICU]
gi|193076290|gb|ABO10932.2| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii ATCC 17978]
gi|213055100|gb|ACJ40002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB0057]
gi|213988694|gb|ACJ58993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB307-0294]
gi|260410203|gb|EEX03502.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|322506700|gb|ADX02154.1| clpX [Acinetobacter baumannii 1656-2]
gi|323516574|gb|ADX90955.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii TCDC-AB0715]
gi|332730107|gb|EGJ61434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013150]
gi|332734827|gb|EGJ65920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013113]
gi|332738733|gb|EGJ69603.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6014059]
gi|333365966|gb|EGK47980.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB210]
gi|342224855|gb|EGT89870.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH2]
gi|342225942|gb|EGT90918.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH1]
gi|342227605|gb|EGT92524.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH3]
gi|342238366|gb|EGU02799.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH4]
gi|347592258|gb|AEP04979.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MDR-ZJ06]
gi|385879769|gb|AFI96864.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii MDR-TJ]
gi|395522417|gb|EJG10506.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC137]
gi|395550858|gb|EJG16867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC189]
gi|395552182|gb|EJG18190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC143]
gi|395563074|gb|EJG24727.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC109]
gi|395570593|gb|EJG31255.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-17]
gi|398328014|gb|EJN44144.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC12]
gi|400207391|gb|EJO38361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC-5]
gi|400212964|gb|EJO43921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-123]
gi|400389159|gb|EJP52231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-18]
gi|400390893|gb|EJP57940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-81]
gi|404559898|gb|EKA65149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-116]
gi|404561198|gb|EKA66434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-143]
gi|404573096|gb|EKA78136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-58]
gi|404666890|gb|EKB34820.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab33333]
gi|404667250|gb|EKB35171.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab11111]
gi|404672782|gb|EKB40586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab44444]
gi|407194975|gb|EKE66111.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1122]
gi|407195364|gb|EKE66498.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1219]
gi|407899994|gb|AFU36825.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii TYTH-1]
gi|408508932|gb|EKK10608.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC0162]
gi|408509293|gb|EKK10968.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-72]
gi|408511349|gb|EKK12997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-235]
gi|408514119|gb|EKK15731.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-251]
gi|408697017|gb|EKL42537.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC180]
gi|408697863|gb|EKL43369.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC098]
gi|408704973|gb|EKL50329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-13]
gi|408707985|gb|EKL53263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-83]
gi|409988337|gb|EKO44509.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC30]
gi|410381343|gb|EKP33909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC065]
gi|410393216|gb|EKP45570.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC111]
gi|410394834|gb|EKP47158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-21]
gi|410399162|gb|EKP51359.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-82]
gi|410400693|gb|EKP52861.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-2]
gi|410408114|gb|EKP60089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-694]
gi|410411434|gb|EKP63305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC1]
gi|410416061|gb|EKP67836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC035]
gi|425489349|gb|EKU55661.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-348]
gi|425500025|gb|EKU66053.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-113]
gi|444759766|gb|ELW84228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-92]
gi|444769614|gb|ELW93782.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AA-014]
gi|444770434|gb|ELW94591.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-78]
gi|444779339|gb|ELX03333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC338]
gi|444783486|gb|ELX07345.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-57]
gi|452955760|gb|EME61157.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MSP4-16]
Length = 437
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 223/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHVSKD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 KDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFNME 342
>gi|416237863|ref|ZP_11631218.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC1]
gi|326568951|gb|EGE19020.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC1]
Length = 438
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 218/308 (70%), Gaps = 21/308 (6%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L P PKE+ LD +VIGQ+ AKK L+VAVYNHY R+ D
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRL--------------KVANDK 127
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VEL KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 128 KDTDGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIV 187
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL +DY+V A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV N+
Sbjct: 188 QKLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANI 247
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHPR + IQ+DT +IL I GGAF ++K I +R + + IGF A V+A
Sbjct: 248 PPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQ------ 301
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D + L VE+ DLI +GLIPE +GR PV+ SL L E LVQ+LTEPKNAL KQY
Sbjct: 302 -DESSITELFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQY 360
Query: 561 RKMFQMNG 568
+ +F M G
Sbjct: 361 QYLFDMEG 368
>gi|422292887|gb|EKU20188.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Nannochloropsis gaditana CCMP526]
Length = 376
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/308 (56%), Positives = 228/308 (74%), Gaps = 26/308 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P+EIC LD +VIGQ AK+VLSVAV+NHY R+ N G+S
Sbjct: 20 PAPREICNVLDDYVIGQATAKRVLSVAVHNHYKRLNN-------TGKSD----------- 61
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL+KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 62 IELQKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 121
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 122 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVPPQGG 181
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + S++GFGA VR N+ V
Sbjct: 182 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRGKGSAMGFGADVR-NVEERNV----- 235
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PV+ +L L E+ L+ +LT+PKNAL KQY+++F+
Sbjct: 236 -GEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTQPKNALVKQYQRLFE 294
Query: 566 M-NGQAAF 572
+ N Q F
Sbjct: 295 LENAQLTF 302
>gi|86357225|ref|YP_469117.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium etli CFN
42]
gi|190891273|ref|YP_001977815.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium etli
CIAT 652]
gi|417110579|ref|ZP_11963749.1| ATP-dependent protease ATP-binding subunit [Rhizobium etli
CNPAF512]
gi|421587069|ref|ZP_16032522.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp.
Pop5]
gi|123512322|sp|Q2K9U6.1|CLPX_RHIEC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238692521|sp|B3PVY5.1|CLPX_RHIE6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86281327|gb|ABC90390.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
gi|190696552|gb|ACE90637.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CIAT 652]
gi|327188466|gb|EGE55680.1| ATP-dependent protease ATP-binding subunit [Rhizobium etli
CNPAF512]
gi|403708547|gb|EJZ23213.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp.
Pop5]
Length = 425
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S GE
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASKN----GE------------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|120610145|ref|YP_969823.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax
citrulli AAC00-1]
gi|326316314|ref|YP_004233986.1| ATP-dependent Clp protease ATP-binding subunit clpX [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|166214750|sp|A1TM61.1|CLPX_ACIAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120588609|gb|ABM32049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
citrulli AAC00-1]
gi|323373150|gb|ADX45419.1| ATP-dependent Clp protease ATP-binding subunit clpX [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 421
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/312 (55%), Positives = 220/312 (70%), Gaps = 22/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G + PTP EI LD +VIGQE AK+ L+VAVYNHY R+ ++
Sbjct: 57 GARDSRGDLPTPSEIKANLDNYVIGQEIAKRTLAVAVYNHYKRLRHK------------- 103
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDV
Sbjct: 104 --DKAGKDEVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 222 MASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQ 281
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ + +E DLI +GLIPE VGR PV+ +L L+E+ LVQ+LTEPKNAL
Sbjct: 282 RS-------LTEVFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNAL 334
Query: 557 GKQYRKMFQMNG 568
KQY K+ M G
Sbjct: 335 VKQYSKLLAMEG 346
>gi|406035384|ref|ZP_11042748.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
parvus DSM 16617 = CIP 108168]
Length = 436
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/314 (55%), Positives = 223/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 HHKHQD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 K------DDRKKISELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFTME 342
>gi|422010032|ref|ZP_16357014.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
rettgeri Dmel1]
gi|414092205|gb|EKT53884.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
rettgeri Dmel1]
Length = 425
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 223/306 (72%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+ +S
Sbjct: 62 SELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDKTS------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGF A V+ G +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK------GES 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+
Sbjct: 280 DKATEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNALTKQYQ 339
Query: 562 KMFQMN 567
+F +
Sbjct: 340 ALFSLE 345
>gi|445458101|ref|ZP_21446925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC047]
gi|444775745|gb|ELW99801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC047]
Length = 437
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 223/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHVSKD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 KDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFNME 342
>gi|416216368|ref|ZP_11623692.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 7169]
gi|416236088|ref|ZP_11630454.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 12P80B1]
gi|416245838|ref|ZP_11634733.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC8]
gi|326561828|gb|EGE12163.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 7169]
gi|326563374|gb|EGE13639.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 12P80B1]
gi|326571925|gb|EGE21930.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC8]
Length = 438
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 218/308 (70%), Gaps = 21/308 (6%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L P PKE+ LD +VIGQ+ AKK L+VAVYNHY R+ D
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRL--------------KVANDK 127
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D D VEL KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 128 KDTDGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIV 187
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL +DY+V A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV N+
Sbjct: 188 QKLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANI 247
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P +G RKHPR + IQ+DT +IL I GGAF ++K I +R + + IGF A V+A
Sbjct: 248 PPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQ------ 301
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
D + L VE+ DLI +GLIPE +GR PV+ SL L E LVQ+LTEPKNAL KQY
Sbjct: 302 -DESSITELFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQY 360
Query: 561 RKMFQMNG 568
+ +F M G
Sbjct: 361 QYLFDMEG 368
>gi|15837790|ref|NP_298478.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
9a5c]
gi|21263488|sp|Q9PE40.1|CLPX_XYLFA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9106158|gb|AAF83998.1|AE003953_2 ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa 9a5c]
Length = 426
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 226/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQ+RAK+ L+VAVYNHY RI ES K +D
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRI--ESRHK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVERAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R ++ IGFG V+++ V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSSESKRDV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E+ LV++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|347760101|ref|YP_004867662.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
gi|347579071|dbj|BAK83292.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 431
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 227/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ AKKVLSVAV+NHY R+ + +QK ++
Sbjct: 75 PTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAH--AQK---------------NND 117
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 118 VEIAKSNIMLLGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 177
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 178 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 237
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + S IGFGA V++ D
Sbjct: 238 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS-------PDERR 290
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY ++FQ
Sbjct: 291 MGAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLFQ 350
Query: 566 MN 567
M
Sbjct: 351 ME 352
>gi|114799276|ref|YP_760783.1| ATP-dependent protease ATP-binding subunit ClpX [Hyphomonas
neptunium ATCC 15444]
gi|123128702|sp|Q0C0G0.1|CLPX_HYPNA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114739450|gb|ABI77575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hyphomonas
neptunium ATCC 15444]
Length = 420
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ AK++LSVAV+NHY R+ S + TDGV
Sbjct: 65 PTPQEICDVLDDYVIGQRYAKRILSVAVHNHYKRL------------SHAGKTDGV---- 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 -ELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 168 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVAAVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I+ R +++SIGFGA +++ G V
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAARGENASIGFGATIKSGEERG------V 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+L E VE DL +GLIPEF+GR PVL +L L E L+Q+LT+PKNAL KQY+++F
Sbjct: 282 GDTLRE-VEPEDLQKFGLIPEFIGRLPVLATLEDLDEKALIQILTQPKNALLKQYQRLFD 340
Query: 566 MN 567
M
Sbjct: 341 ME 342
>gi|406947043|gb|EKD78058.1| hypothetical protein ACD_42C00061G0002 [uncultured bacterium]
Length = 380
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/304 (54%), Positives = 224/304 (73%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+PKE+ LD++V+GQ AKK+LSVAVYNHY R+ + +S +D
Sbjct: 24 LPSPKELHTQLDQYVVGQTNAKKILSVAVYNHYKRLRHRAS-----------------ND 66
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 67 DVELTKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENIVQKLL 126
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V A+ GI+YIDE+DKI +K++S +++RDVSGEGVQQALLK++EGTV +P +G
Sbjct: 127 QKCNYDVEKAETGIIYIDEIDKIARKSDSPSLTRDVSGEGVQQALLKLIEGTVAAIPPQG 186
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF D+EK + +R +S IGF A V+ + V
Sbjct: 187 GRKHPQQEYLQVDTTNILFICGGAFADLEKIVQQRTDESGIGFAASVKGK-------NKV 239
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+++++ VE+ DLI +GLIPEFVGR PV+ L L E+ L+ +LT+PKNAL KQY+K+F
Sbjct: 240 SANNVIKKVENQDLIKFGLIPEFVGRLPVISVLDELDESALLAILTQPKNALTKQYKKLF 299
Query: 565 QMNG 568
+ G
Sbjct: 300 EFEG 303
>gi|430003193|emb|CCF18978.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.]
Length = 425
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 227/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ++AK++LSVAV+NHY R+ + S GE
Sbjct: 67 PTPQDIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHASK----GGE------------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|417545335|ref|ZP_12196421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC032]
gi|421666371|ref|ZP_16106463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC087]
gi|421671117|ref|ZP_16111099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC099]
gi|400383223|gb|EJP41901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC032]
gi|410383414|gb|EKP35947.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC099]
gi|410388296|gb|EKP40735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC087]
Length = 437
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 223/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHVSKD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 KDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFNME 342
>gi|374619901|ref|ZP_09692435.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [gamma
proteobacterium HIMB55]
gi|374303128|gb|EHQ57312.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [gamma
proteobacterium HIMB55]
Length = 425
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/306 (56%), Positives = 222/306 (72%), Gaps = 22/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P P+EI LD++VIGQ RAK+VLSVAVYNHY R+ T +G +
Sbjct: 62 DKLPVPREINDILDQYVIGQSRAKRVLSVAVYNHYKRLR---------------TGEGTN 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 SD-VELGKSNILLVGPTGSGKTLLAETLARMLDVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF ++K I R IGF A V+A +
Sbjct: 226 QGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIQNRSDKGGIGFSADVKALADKKDFAE 285
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++V +E+ DL+ YGLIPEFVGR P++ +L L + LVQ+LTEPKNAL KQY K
Sbjct: 286 SLV------DLEAEDLVQYGLIPEFVGRLPMIATLEELDVDALVQILTEPKNALTKQYHK 339
Query: 563 MFQMNG 568
MF M G
Sbjct: 340 MFDMEG 345
>gi|397905706|ref|ZP_10506548.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caloramator
australicus RC3]
gi|397161225|emb|CCJ33883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caloramator
australicus RC3]
Length = 431
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 227/305 (74%), Gaps = 25/305 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++V+GQ+ AKK L+VAVYNHY RI S++ D
Sbjct: 59 LPKPKEIKEYLDQYVVGQDEAKKALAVAVYNHYKRINAPKSRR----------------D 102
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLI 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV NVP +G
Sbjct: 163 QNADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA-NMRAGGVTDA 503
RKHP + +QIDT +ILFICGGAF I+K I +R +SIGFGA +++ N R G
Sbjct: 223 GRKHPHQEFLQIDTTNILFICGGAFEGIDKIIEKRLHKNSIGFGAEIKSKNERNVG---- 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++ + DL+ +G+IPEFVGR P++V+L L ++ L+ +LTEPKNAL KQY K+
Sbjct: 279 ----EILKHILPEDLLKFGMIPEFVGRVPIVVTLNQLDKDALINILTEPKNALTKQYAKL 334
Query: 564 FQMNG 568
F+M+G
Sbjct: 335 FEMDG 339
>gi|30248063|ref|NP_840133.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosomonas
europaea ATCC 19718]
gi|46576514|sp|Q82Y56.1|CLPX_NITEU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|30179948|emb|CAD83943.1| clpX; ATP-dependent protease (ATP-binding specificity subunit)
[Nitrosomonas europaea ATCC 19718]
Length = 426
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/304 (58%), Positives = 221/304 (72%), Gaps = 20/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD++VIGQE AKK+LSVAVYNHY R+ N S K + G D
Sbjct: 63 LPTPHEIRETLDQYVIGQESAKKILSVAVYNHYKRLKNLS--KVNNG------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP +G
Sbjct: 169 QKCNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTALVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILFICGGAF I+K I R + S IGFGA V D
Sbjct: 229 GRKHPNQEFIQIDTTNILFICGGAFDGIDKIIRGRSEKSGIGFGADVINQ------NDRK 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ +++ +E DLI YGLIPEFVGR PV+ +L L E L+Q+L EPKNAL KQY K+F
Sbjct: 283 ELNKILKDIEPEDLIKYGLIPEFVGRLPVVATLSELNEAALIQILVEPKNALIKQYNKLF 342
Query: 565 QMNG 568
M G
Sbjct: 343 SMEG 346
>gi|430744132|ref|YP_007203261.1| LOW QUALITY PROTEIN: endopeptidase Clp ATP-binding regulatory
subunit ClpX [Singulisphaera acidiphila DSM 18658]
gi|430015852|gb|AGA27566.1| LOW QUALITY PROTEIN: endopeptidase Clp ATP-binding regulatory
subunit ClpX [Singulisphaera acidiphila DSM 18658]
Length = 459
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 221/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD +VI Q+RAKKVLSVAV+NHY R+ + GE + D
Sbjct: 91 IPTPREIKEQLDAYVIDQDRAKKVLSVAVHNHYKRLVH--------GEDA--------DS 134
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
++E++KSNILLMGPTG GKTLLA+TLAR +NVPF I DATTLT+AGYVGEDVE+IL KLL
Sbjct: 135 SIEIDKSNILLMGPTGCGKTLLARTLARILNVPFAIGDATTLTEAGYVGEDVENILLKLL 194
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+D+++ +AQ+GI+YIDE+DKI K +++I+RDVSGEGVQQALLKMLEGTV NVP +G
Sbjct: 195 HAADFDLESAQRGIIYIDEIDKIGKTNHNVSITRDVSGEGVQQALLKMLEGTVANVPPQG 254
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP IQ+DT +ILFICGG FV +E I+ R +IGFG+ A V
Sbjct: 255 GRKHPEQQYIQLDTTNILFICGGTFVGLENLIARRVGRKTIGFGSQSEAEHN-------V 307
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
SL++ V S D++ +G+IPEFVGR PV+ L+ L + LVQ++TEP+NAL KQYRK+F
Sbjct: 308 ELGSLLDKVTSDDILEFGMIPEFVGRLPVVCPLMPLDVDALVQIMTEPRNALVKQYRKLF 367
Query: 565 QMNG 568
+M G
Sbjct: 368 EMEG 371
>gi|392382085|ref|YP_005031282.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense Sp245]
gi|356877050|emb|CCC97851.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense Sp245]
Length = 422
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I LD +VIGQ AK+VLSVAV+NHY R+ + G +
Sbjct: 64 PTPRDIHAVLDDYVIGQHHAKRVLSVAVHNHYKRLAH-----------------GTKHND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + +SIGFGA VR D
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRG-------PDERS 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E+ LV++LT+PKNAL KQY+++F+
Sbjct: 280 TGDILREVEPEDLLKFGLIPEFIGRLPVVATLADLDESALVEILTKPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|262373454|ref|ZP_06066732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
junii SH205]
gi|262311207|gb|EEY92293.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
junii SH205]
Length = 436
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 224/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G++
Sbjct: 53 GDWATKPL----PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQT 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D +E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 HHAHQD------IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D+ S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 K------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFTME 342
>gi|268592035|ref|ZP_06126256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rettgeri DSM 1131]
gi|291312427|gb|EFE52880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rettgeri DSM 1131]
Length = 425
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 223/306 (72%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+ +S
Sbjct: 62 SELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDKTS------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGF A V+ G +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK------GES 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+
Sbjct: 280 DKATEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILQEPKNALTKQYQ 339
Query: 562 KMFQMN 567
+F +
Sbjct: 340 ALFSLE 345
>gi|419762102|ref|ZP_14288351.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae DSM 30104]
gi|397745020|gb|EJK92229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae DSM 30104]
Length = 436
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 76 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 118
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 119 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 178
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 179 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 238
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 239 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 292
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 293 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 352
Query: 564 FQMNG 568
F + G
Sbjct: 353 FSLEG 357
>gi|425744506|ref|ZP_18862562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-323]
gi|425490661|gb|EKU56957.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-323]
Length = 436
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 225/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWATKPL----PKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D +E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 NHGHQD------IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D+ S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 K------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFTME 342
>gi|417674454|ref|ZP_12323887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 155-74]
gi|420345497|ref|ZP_14846929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 965-58]
gi|332085738|gb|EGI90902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 155-74]
gi|391276381|gb|EIQ35153.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 965-58]
Length = 424
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|300721990|ref|YP_003711270.1| ATPase [Xenorhabdus nematophila ATCC 19061]
gi|297628487|emb|CBJ89054.1| ATPase, chaperone subunit of serine protease [Xenorhabdus
nematophila ATCC 19061]
Length = 423
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G ++
Sbjct: 64 LPTPHEIRQHLDDYVIGQEQAKKVLAVAVYNHYKRLRN-----------------GDTNN 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS-IGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K +S+R SS IGF A V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRLNVSSGIGFSATVK------GESEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGQLLAQVEPEDLIKFGLIPEFIGRLPVVATLTELNEEALIQILQEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|330814218|ref|YP_004358457.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487313|gb|AEA81718.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. IMCC9063]
Length = 380
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 228/305 (74%), Gaps = 26/305 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+PKEI LD++VIGQ+ AK++LSVAV+NHY R+ E K + G+
Sbjct: 20 PSPKEIFSTLDEYVIGQKTAKQILSVAVHNHYKRLNYEG--KNNKGD------------- 64
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 65 VELAKSNILLMGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 124
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 125 AADYNVEKAQRGIVYIDEVDKISRKTENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 184
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV--RANMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF I+K IS R + SSIGFG+ + +A + G
Sbjct: 185 RKHPQQEFLQVDTTNILFICGGAFAGIDKIISSRDKGSSIGFGSKLNTKAEKKVG----- 239
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L++++E DL+ +GLIPEF+GR P++ +L L E+ LV++L EPKN+L KQY K+
Sbjct: 240 ----ELLKSIEPEDLLKFGLIPEFIGRLPIISTLEDLDEDSLVKILEEPKNSLTKQYAKL 295
Query: 564 FQMNG 568
F++ G
Sbjct: 296 FEIEG 300
>gi|329121862|ref|ZP_08250477.1| ATP-dependent Clp protease ATP-binding subunit [Dialister
micraerophilus DSM 19965]
gi|327467800|gb|EGF13292.1| ATP-dependent Clp protease ATP-binding subunit [Dialister
micraerophilus DSM 19965]
Length = 411
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/304 (54%), Positives = 227/304 (74%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP EI + +D++VI QE AK L+VAVYNHY RI E DG +D
Sbjct: 60 KLPTPVEIKEYMDQYVIDQEEAKIALAVAVYNHYKRIKYEK--------------DGGND 105
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNI+++GPTGSGKTLLA+TLAR+++VPF I+DATTLT+AGYVGEDVE+IL +L
Sbjct: 106 D-VELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRL 164
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV NVP +
Sbjct: 165 IQAADYDLEKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQ 224
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQ+DT ILFICGGAF ++K +++R S++GFGA ++
Sbjct: 225 GGRKHPNQEMIQLDTSKILFICGGAFAGMDKVVAKRLTKSAVGFGADIKKKEEKD----- 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ ++ VE DL+ +GLIPEF+GR P+LV+L L+E+ LV++LT+PKNAL KQY+K+
Sbjct: 280 --VAKILNMVEPEDLLKFGLIPEFIGRLPILVALSPLSEDALVRILTQPKNALIKQYKKL 337
Query: 564 FQMN 567
+M+
Sbjct: 338 LKMD 341
>gi|428206836|ref|YP_007091189.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chroococcidiopsis thermalis PCC 7203]
gi|428008757|gb|AFY87320.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chroococcidiopsis thermalis PCC 7203]
Length = 446
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/311 (56%), Positives = 231/311 (74%), Gaps = 15/311 (4%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG +L N+ P P+EI LD+ VIGQ+ AKKVLSVAVYNHY R+ S K S+G++ +
Sbjct: 71 GGISL-NQIPKPREIKAHLDEHVIGQDEAKKVLSVAVYNHYKRLSLVQS-KNSSGKAGA- 127
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
+D VEL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDV
Sbjct: 128 ------EDIVELQKSNILLIGPTGCGKTLLAQTLAQILDVPFAVADATTLTEAGYVGEDV 181
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT
Sbjct: 182 ENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGT 241
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V NVP +G RKHP D IQIDT +ILFICGGAFV +EK + +R SIGF P
Sbjct: 242 VANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRIGKKSIGFIQP------ 295
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
G++ T+ ++ +E DL+ +G+IPEF+GR P++ + L E LV +LT+PK+AL
Sbjct: 296 GEGLSREKRTADILVHLEPDDLVKFGMIPEFIGRVPMVAVVEPLDEEALVAILTQPKSAL 355
Query: 557 GKQYRKMFQMN 567
KQY+K+ +M+
Sbjct: 356 VKQYQKLLKMD 366
>gi|254418572|ref|ZP_05032296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
sp. BAL3]
gi|196184749|gb|EDX79725.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
sp. BAL3]
Length = 422
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 222/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI LD +VIGQ AKKVLSVAV+NHY R+ + + ++
Sbjct: 64 PTPKEIRDVLDDYVIGQSHAKKVLSVAVHNHYKRLNHATK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFI GGAF +EK IS R +SIGFGA V+ D
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGAGASIGFGAQVKE-------IDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ VE DL+ +GLIPEF+GR PVL +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 280 TGDILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDETALVTILTEPKNALVKQYKRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|152968973|ref|YP_001334082.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238893387|ref|YP_002918121.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|330011534|ref|ZP_08307120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. MS 92-3]
gi|365138465|ref|ZP_09345149.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella sp.
4_1_44FAA]
gi|378977300|ref|YP_005225441.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|386033453|ref|YP_005953366.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae KCTC 2242]
gi|402782115|ref|YP_006637661.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419973311|ref|ZP_14488736.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978495|ref|ZP_14493791.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983881|ref|ZP_14499030.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989933|ref|ZP_14504907.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995812|ref|ZP_14510617.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420000723|ref|ZP_14515381.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420007651|ref|ZP_14522144.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420013284|ref|ZP_14527595.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018369|ref|ZP_14532566.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420024460|ref|ZP_14538473.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420030218|ref|ZP_14544045.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420035321|ref|ZP_14548985.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420041655|ref|ZP_14555151.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420047716|ref|ZP_14561032.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420053418|ref|ZP_14566596.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420058262|ref|ZP_14571275.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420064550|ref|ZP_14577359.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420070363|ref|ZP_14583015.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420076106|ref|ZP_14588579.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420084375|ref|ZP_14596635.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421908673|ref|ZP_16338508.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421918683|ref|ZP_16348198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424829258|ref|ZP_18253986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424934795|ref|ZP_18353167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425080159|ref|ZP_18483256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425090281|ref|ZP_18493366.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428149079|ref|ZP_18996911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933609|ref|ZP_19007157.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae JHCK1]
gi|428939230|ref|ZP_19012343.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae VA360]
gi|449060066|ref|ZP_21737738.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae hvKP1]
gi|166214780|sp|A6T5I1.1|CLPX_KLEP7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150953822|gb|ABR75852.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238545703|dbj|BAH62054.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|328534151|gb|EGF60786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. MS 92-3]
gi|339760581|gb|AEJ96801.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae KCTC 2242]
gi|363654925|gb|EHL93798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella sp.
4_1_44FAA]
gi|364516711|gb|AEW59839.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397348783|gb|EJJ41881.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397351566|gb|EJJ44649.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354932|gb|EJJ47958.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397366796|gb|EJJ59411.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397368454|gb|EJJ61060.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397372938|gb|EJJ65410.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397380233|gb|EJJ72418.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397384352|gb|EJJ76472.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390326|gb|EJJ82236.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399075|gb|EJJ90732.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397402039|gb|EJJ93651.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397408057|gb|EJJ99433.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397416556|gb|EJK07729.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397418192|gb|EJK09351.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397424203|gb|EJK15110.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433256|gb|EJK23906.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397437303|gb|EJK27872.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397441745|gb|EJK32111.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397447617|gb|EJK37807.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397450261|gb|EJK40371.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|402542977|gb|AFQ67126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405607084|gb|EKB80054.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613965|gb|EKB86686.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407808982|gb|EKF80233.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410117464|emb|CCM81133.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118950|emb|CCM90823.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414706677|emb|CCN28381.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426304301|gb|EKV66448.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae VA360]
gi|426304863|gb|EKV66997.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae JHCK1]
gi|427540936|emb|CCM93049.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874274|gb|EMB09329.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae hvKP1]
Length = 424
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FSLEG 345
>gi|325292626|ref|YP_004278490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Agrobacterium
sp. H13-3]
gi|418406779|ref|ZP_12980098.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens 5A]
gi|325060479|gb|ADY64170.1| ATP-dependent clp protease ATP-binding subunit ClpX [Agrobacterium
sp. H13-3]
gi|358007272|gb|EHJ99595.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens 5A]
Length = 425
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/302 (55%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ++AKK+LSVAV+NHY R+ + S +
Sbjct: 67 PTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHASK-----------------NGD 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|226706596|sp|B8CRF6.1|CLPX_SHEPW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|212557510|gb|ACJ29964.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
piezotolerans WP3]
Length = 423
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 225/306 (73%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ++AKKVLSVAVYNHY R+ N S +
Sbjct: 61 DKLPTPHELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNASPK---------------- 104
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 -DGVELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQK 163
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 164 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILF+CGGAF +EK I +R + IGFGA V+ G
Sbjct: 224 QGGRKHPQQEFLQVDTSKILFVCGGAFAGLEKVIEQRSHVGTGIGFGAEVK-----GEAD 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
A ++ +L++ VE DL+ +GLIPEF+GR PVL +L L + L+Q+L+EPKNA+ KQ+
Sbjct: 279 KATISDTLLQ-VEPEDLVKFGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAITKQFA 337
Query: 562 KMFQMN 567
+F+M
Sbjct: 338 ALFEME 343
>gi|300023468|ref|YP_003756079.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525289|gb|ADJ23758.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Hyphomicrobium denitrificans ATCC 51888]
Length = 415
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ AK+VLSVAV+NHY R+ + + ++
Sbjct: 59 PTPQEICNVLDSYVIGQFHAKRVLSVAVHNHYKRLNHATK-----------------NND 101
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 162 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + SSIGF A V D
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFSARVTG-------PDERR 274
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E LVQ+LTEPKNA+ KQY+++F+
Sbjct: 275 TGDILRGVEPEDLLKFGLIPEFIGRLPVIATLEDLDEAALVQILTEPKNAIVKQYQRLFE 334
Query: 566 MN 567
M
Sbjct: 335 ME 336
>gi|15888589|ref|NP_354270.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|335035105|ref|ZP_08528448.1| ATP-dependent protease ATP-binding subunit [Agrobacterium sp. ATCC
31749]
gi|23813866|sp|Q8UFY5.1|CLPX_AGRT5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15156307|gb|AAK87055.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|333793536|gb|EGL64890.1| ATP-dependent protease ATP-binding subunit [Agrobacterium sp. ATCC
31749]
Length = 425
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/302 (55%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ++AKK+LSVAV+NHY R+ + S +
Sbjct: 67 PTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHASK-----------------NGD 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|302382858|ref|YP_003818681.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brevundimonas
subvibrioides ATCC 15264]
gi|302193486|gb|ADL01058.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
subvibrioides ATCC 15264]
Length = 420
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ AKKVLSVAV+NHY R+ + + ++
Sbjct: 64 PTPKEIREVLDDYVIGQSHAKKVLSVAVHNHYKRLNHATK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFI GGAF +EK I+ R +SIGFGA V+ D
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVIAARGAGASIGFGAKVKE-------VDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ VE DL+ +GLIPEF+GR PVL +L L E LV +LTEPKNAL KQY+++F+
Sbjct: 280 TGDILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDEKALVTILTEPKNALVKQYKRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|259909253|ref|YP_002649609.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia pyrifoliae
Ep1/96]
gi|385787571|ref|YP_005818680.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia sp.
Ejp617]
gi|224964875|emb|CAX56397.1| ATP-dependent specificity component of ClpP serine protease,
chaperone [Erwinia pyrifoliae Ep1/96]
gi|310766843|gb|ADP11793.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia sp.
Ejp617]
Length = 424
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVLSVAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K +S+R S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVK------GKSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|28198387|ref|NP_778701.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
Temecula1]
gi|182681029|ref|YP_001829189.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
M23]
gi|386084550|ref|YP_006000832.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|417558940|ref|ZP_12209899.1| ATP-dependent protease Clp, ATPase subunit ClpX [Xylella fastidiosa
EB92.1]
gi|32129455|sp|Q87E50.1|CLPX_XYLFT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691092|sp|B2I8K4.1|CLPX_XYLF2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28056457|gb|AAO28350.1| ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa Temecula1]
gi|182631139|gb|ACB91915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xylella
fastidiosa M23]
gi|307579497|gb|ADN63466.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|338178522|gb|EGO81508.1| ATP-dependent protease Clp, ATPase subunit ClpX [Xylella fastidiosa
EB92.1]
Length = 426
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 225/304 (74%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQ+RAK+ L+VAVYNHY RI ES K +D
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRI--ESRHK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 HKCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R + IGFG V+++ V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCNEVGGIGFGVKVKSSESKRDV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPEFVGR PV+ +L L E+ LV++LTEPKNA+ KQ++K+
Sbjct: 286 ---GKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKL 342
Query: 564 FQMN 567
F+M
Sbjct: 343 FEME 346
>gi|308446478|ref|XP_003087188.1| hypothetical protein CRE_23295 [Caenorhabditis remanei]
gi|308260041|gb|EFP03994.1| hypothetical protein CRE_23295 [Caenorhabditis remanei]
Length = 436
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/314 (54%), Positives = 224/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ + +
Sbjct: 53 GDWATRPL----PKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQTGHKPK--- 105
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 106 ----------DAVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIIQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQ+DT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTANVKN 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D+ S L VE++DL+ +GLIPEF+GR PV+ +L L + L+Q+LTEPK
Sbjct: 276 K------DDSKKVSELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDQEALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F+M
Sbjct: 330 NALTRQYQYLFEME 343
>gi|152980700|ref|YP_001353222.1| ATP-dependent protease ATP-binding subunit ClpX [Janthinobacterium
sp. Marseille]
gi|166214779|sp|A6SY75.1|CLPX_JANMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151280777|gb|ABR89187.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. Marseille]
Length = 422
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 219/304 (72%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+E+C+ LD++VIGQ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPQELCELLDQYVIGQNPAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVERAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + K ISER + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFSASVKSR-------EER 280
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S +M E DLI +GLIPE VGR PV+ +L L E L+Q+L EPKNAL KQY K+
Sbjct: 281 TASQVMMDTEPEDLIKFGLIPELVGRLPVVATLRELDEEALIQILLEPKNALIKQYSKLL 340
Query: 565 QMNG 568
QM G
Sbjct: 341 QMEG 344
>gi|365838986|ref|ZP_09380239.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaeroglobus
geminatus F0357]
gi|364566007|gb|EHM43713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaeroglobus
geminatus F0357]
Length = 415
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 223/304 (73%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP+EI + LD +VIGQE AKK LSVAVYNHY R+ + SS ++G+
Sbjct: 61 KLPTPREIKQNLDDYVIGQETAKKTLSVAVYNHYKRLQSNSSM--NSGD----------- 107
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL+KSNI+++GPTGSGKTLLA+TLAR+++VPF IADAT+LT+AGYVGEDVE+ L KL
Sbjct: 108 --VELQKSNIVMVGPTGSGKTLLAQTLARFLDVPFAIADATSLTEAGYVGEDVENCLLKL 165
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +D+++A A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT NVP +
Sbjct: 166 IQAADFDIARAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTEANVPPQ 225
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + +QIDT +ILFICGGAF IEKTI RR + ++GFGA +
Sbjct: 226 GGRKHPHQEMLQIDTTNILFICGGAFDGIEKTIRSRRTEKNMGFGADIHKKNEES----- 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L++ + +DL +GLIPE +GR PVLV+L L E +V +LTEPKNAL KQY+KM
Sbjct: 281 --VEELLKEIIPTDLQKFGLIPELIGRLPVLVTLNPLDEEAMVHILTEPKNALVKQYQKM 338
Query: 564 FQMN 567
M+
Sbjct: 339 LDMD 342
>gi|349685704|ref|ZP_08896846.1| Clp protease ATP-binding subunit [Gluconacetobacter oboediens
174Bp2]
Length = 419
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 227/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ AKKVLSVAV+NHY R+ + +QK ++
Sbjct: 63 PTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAH--AQK---------------NND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + S IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS-------PDERR 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY ++FQ
Sbjct: 279 MGAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLFQ 338
Query: 566 MN 567
M
Sbjct: 339 ME 340
>gi|332528100|ref|ZP_08404131.1| ATP-dependent protease ATP-binding subunit ClpX [Rubrivivax
benzoatilyticus JA2]
gi|332112671|gb|EGJ12464.1| ATP-dependent protease ATP-binding subunit ClpX [Rubrivivax
benzoatilyticus JA2]
Length = 423
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/304 (57%), Positives = 220/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++VIGQ+ AK+ LSVAVYNHY R+ + + + D
Sbjct: 66 LPVPSEIKTSLDQYVIGQDVAKRTLSVAVYNHYKRLKHMGAGGK---------------D 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLA+ +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 EVELTKSNILLIGPTGSGKTLLAQTLAKLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 170
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 QNCNYDVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 230
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V +
Sbjct: 231 GRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQGRTEKSGIGFGATVHSKSEKR------ 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S L VE DLI +GLIPE VGR PV+ +L LTE+ +VQ+LTEPKNAL KQY+K+F
Sbjct: 285 -VSDLFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNALVKQYQKLF 343
Query: 565 QMNG 568
M+G
Sbjct: 344 GMDG 347
>gi|330994050|ref|ZP_08317980.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Gluconacetobacter sp. SXCC-1]
gi|329758996|gb|EGG75510.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Gluconacetobacter sp. SXCC-1]
Length = 419
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 227/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ AKKVLSVAV+NHY R+ + +QK ++
Sbjct: 63 PTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAH--AQK---------------NND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLLGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + S IGFGA V++ R G V
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQSPEERRMGAV--- 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY ++
Sbjct: 283 ------LRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARL 336
Query: 564 FQMN 567
FQM
Sbjct: 337 FQME 340
>gi|188534633|ref|YP_001908430.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia
tasmaniensis Et1/99]
gi|188029675|emb|CAO97554.1| ATP-dependent specificity component of ClpP serine protease,
chaperone [Erwinia tasmaniensis Et1/99]
Length = 424
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVLSVAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K +S+R S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVK------GKSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|402771335|ref|YP_006590872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocystis
sp. SC2]
gi|401773355|emb|CCJ06221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocystis
sp. SC2]
Length = 421
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/303 (55%), Positives = 224/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EICK LD +VIGQ +AK+VLSVAV+NHY R+ + +
Sbjct: 63 IPTPREICKVLDDYVIGQSQAKRVLSVAVHNHYKRLNHATKH-----------------G 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
SDYNV AQ+GIVY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF +EK IS R +++SIGF A V++ D
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRNTSIGFAATVQS-------PDER 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T + V+ DL+ +GLIPEFVGR PV+ +L L E+ L ++LTEPKNAL KQY+++F
Sbjct: 279 RTGDIFRQVQPEDLLKFGLIPEFVGRLPVIATLEDLDEDALKRILTEPKNALVKQYQRLF 338
Query: 565 QMN 567
+M
Sbjct: 339 EME 341
>gi|405379886|ref|ZP_11033731.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF142]
gi|397323501|gb|EJJ27894.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF142]
Length = 425
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/302 (55%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S +
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASK-----------------NGD 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|260549097|ref|ZP_05823318.1| ATP-dependent protease Clp [Acinetobacter sp. RUH2624]
gi|260407825|gb|EEX01297.1| ATP-dependent protease Clp [Acinetobacter sp. RUH2624]
Length = 437
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 224/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI L+++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASKAL----PKPHEIRAALNQYVIGQDLAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHVSKD------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKK 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 KDESKKIAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFNME 342
>gi|257093850|ref|YP_003167491.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046374|gb|ACV35562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 423
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/317 (54%), Positives = 225/317 (70%), Gaps = 22/317 (6%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G G PTPKEI LD++VIGQ++AK++LSVAVYNHY R+ R G +
Sbjct: 53 GDQGAKGAKGDLPTPKEISALLDQYVIGQDQAKRILSVAVYNHYKRL-------RHHGRA 105
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
D +EL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVG
Sbjct: 106 G---------DDIELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVG 156
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+ AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++
Sbjct: 157 EDVENIIQKLLQKADYDTEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKII 216
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV +VP +G RKHP D +Q+DT +ILFICGGAF +EK I R IGFGA V++
Sbjct: 217 EGTVASVPPQGGRKHPNQDFVQVDTTNILFICGGAFDGLEKVIRNRSDRGGIGFGAEVKS 276
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + + ++ VE DLI +GLIPE +GR PV+ +L L+ LVQ+L EPK
Sbjct: 277 KDNSKAIGE------VLRGVEPEDLIKFGLIPELIGRLPVIATLEELSAAALVQILIEPK 330
Query: 554 NALGKQYRKMFQMNGQA 570
NAL KQY+K+F M G A
Sbjct: 331 NALVKQYQKLFGMEGVA 347
>gi|159043936|ref|YP_001532730.1| ATP-dependent protease ATP-binding subunit ClpX [Dinoroseobacter
shibae DFL 12]
gi|189044133|sp|A8LJA7.1|CLPX_DINSH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157911696|gb|ABV93129.1| ATP-dependent Clp protease [Dinoroseobacter shibae DFL 12]
Length = 419
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/308 (56%), Positives = 228/308 (74%), Gaps = 26/308 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ AK+VLSVAV+NHY R+ + AG++
Sbjct: 63 PTPQEICDVLDDYVIGQSHAKRVLSVAVHNHYKRLNH-------AGKTD----------- 104
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 165 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 224
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I++R + S+IGFGA V+ N G
Sbjct: 225 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSAIGFGADVKENDTRG------- 277
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PV+ +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 278 VGEMFGELEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALVTILTQPKNALVKQYQRLFE 337
Query: 566 M-NGQAAF 572
+ + Q F
Sbjct: 338 LEDAQLTF 345
>gi|306820815|ref|ZP_07454439.1| ATP-dependent Clp protease ATP-binding subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|402310389|ref|ZP_10829355.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Eubacterium
sp. AS15]
gi|304551133|gb|EFM39100.1| ATP-dependent Clp protease ATP-binding subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|400368841|gb|EJP21848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Eubacterium
sp. AS15]
Length = 416
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 226/303 (74%), Gaps = 23/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI LD+++IGQE AKKVLSV++YNHY R+YN ++K D
Sbjct: 61 LPKPKEIKSFLDEYIIGQESAKKVLSVSLYNHYKRVYNLENKK----------------D 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
++++KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 105 DIDIQKSNILLLGPTGSGKTLLAQTLAKIMNVPFAIADATTLTEAGYVGEDVENILLKLI 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
SDYN+ AQ GI+YIDE+DKIT+K+E+++I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 165 QASDYNIERAQTGIIYIDEIDKITRKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +I+FI GGAF I++ I +R +SIGFG + + + V
Sbjct: 225 GRKHPSQELIQIDTTNIMFIVGGAFEGIDEIIKKRMGKNSIGFGTEIVSK-------EDV 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + V++ DL+ YGLIPEFVGR P++ SL L E+ LV++L EPKN+L KQ++K+F
Sbjct: 278 NKEKIYKKVQTEDLLKYGLIPEFVGRLPIVASLDPLDESALVKILKEPKNSLVKQFKKLF 337
Query: 565 QMN 567
+++
Sbjct: 338 ELD 340
>gi|288958757|ref|YP_003449098.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
gi|288911065|dbj|BAI72554.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
Length = 420
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I LD +VIGQ AK+VLSVAV+NHY R+ + G +
Sbjct: 64 PTPRDIHAVLDDYVIGQSYAKRVLSVAVHNHYKRLAH-----------------GTKHND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + +SIGFGA VR+ D
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRS-------ADERA 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PVL +L L E LV++L++PKNAL KQY+++F+
Sbjct: 280 TGEILHEVEPEDLLKFGLIPEFIGRLPVLATLSDLDEAALVEILSKPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|408785975|ref|ZP_11197715.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium lupini
HPC(L)]
gi|424910123|ref|ZP_18333500.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846154|gb|EJA98676.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408488164|gb|EKJ96478.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium lupini
HPC(L)]
Length = 425
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/302 (55%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ++AKK+LSVAV+NHY R+ + S +
Sbjct: 67 PTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHASK-----------------NGD 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|290474662|ref|YP_003467542.1| ATPase, chaperone subunit of serine protease [Xenorhabdus bovienii
SS-2004]
gi|289173975|emb|CBJ80762.1| ATPase, chaperone subunit of serine protease [Xenorhabdus bovienii
SS-2004]
Length = 423
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE AKKVL+VAVYNHY R+ N G ++
Sbjct: 64 LPTPHEIRQHLDDYVIGQETAKKVLAVAVYNHYKRLRN-----------------GDTNN 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS-IGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R SS IGF A V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNVSSGIGFSATVK------GESEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLAQAEPEDLIKFGLIPEFIGRLPVVATLTELSEDALIQILQEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|398805270|ref|ZP_10564249.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Polaromonas
sp. CF318]
gi|398092051|gb|EJL82473.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Polaromonas
sp. CF318]
Length = 421
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 223/304 (73%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AK+ L+VAVYNHY R+ ++ K+ D
Sbjct: 65 LPTPLEIKGTLDGYVIGQEPAKRTLAVAVYNHYKRLRHKEKAKK---------------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +Q+DT +ILFICGGAF +EK I R + S +GFGA V++ ++ +T+A
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFAGLEKVIENRTEASGMGFGATVKSK-KSRTLTEA- 287
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ VE DLI +GLIPE VGR PV+ +L L+E+ LVQ+LTEPKNA+ KQ+ K+
Sbjct: 288 -----FKEVEPEDLIKFGLIPELVGRMPVVATLAELSEDALVQILTEPKNAVVKQFSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|384084584|ref|ZP_09995759.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acidithiobacillus thiooxidans ATCC 19377]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/306 (58%), Positives = 225/306 (73%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P P EI K LD +VIGQ+ AKKVLSVAVYNHY R+ + G
Sbjct: 62 DKLPKPMEIRKTLDDYVIGQDSAKKVLSVAVYNHYKRLEH-----------------GGK 104
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D+ VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 DNEVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 LLQKCDYDVEKAQTGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTVASVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT+ ILFICGGAF +EK++S R + +GF AP++ + D
Sbjct: 225 QGGRKHPQQEFLQVDTRHILFICGGAFAGLEKSVSSRIEKGGMGFNAPLKKRDK-----D 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
A + LM+ +E DL+ YGLIPEFVGR P+L L L E L+ +LTEPKNAL KQY+K
Sbjct: 280 A-TAAMLMQNLEPEDLVRYGLIPEFVGRLPILALLEELDEEALMSILTEPKNALIKQYQK 338
Query: 563 MFQMNG 568
MF + G
Sbjct: 339 MFSLEG 344
>gi|385787573|ref|YP_005818682.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia sp.
Ejp617]
gi|310766845|gb|ADP11795.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia sp.
Ejp617]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVLSVAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K +S+R S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVK------GKSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|262042474|ref|ZP_06015633.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040178|gb|EEW41290.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FSLEG 345
>gi|209548851|ref|YP_002280768.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424890862|ref|ZP_18314461.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|424894552|ref|ZP_18318126.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|424914595|ref|ZP_18337959.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|238066658|sp|B5ZY09.1|CLPX_RHILW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209534607|gb|ACI54542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392850771|gb|EJB03292.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|393173080|gb|EJC73125.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393178779|gb|EJC78818.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 425
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S GE
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASKN----GE------------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|312128164|ref|YP_003993038.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor hydrothermalis 108]
gi|311778183|gb|ADQ07669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor hydrothermalis 108]
Length = 433
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/305 (54%), Positives = 225/305 (73%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI + LD++V+GQ+ AKK+LSVAVYNHY RIY ++K
Sbjct: 60 RLPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------- 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNIL++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 104 DDVELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GI+YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct: 164 IQNADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFICGGAF IEK I +R + ++GF A V +
Sbjct: 224 GGRKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKVESKKEKK----- 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ + DL+ +G+IPEF+GR P++V+L AL + L+++LTEPKNAL KQY+K+
Sbjct: 279 --IGDILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKL 336
Query: 564 FQMNG 568
F M+G
Sbjct: 337 FAMDG 341
>gi|149186484|ref|ZP_01864796.1| ATP-dependent protease ATP-binding subunit [Erythrobacter sp.
SD-21]
gi|148829711|gb|EDL48150.1| ATP-dependent protease ATP-binding subunit [Erythrobacter sp.
SD-21]
Length = 418
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/319 (56%), Positives = 224/319 (70%), Gaps = 33/319 (10%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG KDG PTPKEI + L+ +VIGQ+RAK+VLSVAV+NHY R+ +
Sbjct: 57 SGKKDG---------DVPTPKEIFETLNDYVIGQDRAKRVLSVAVHNHYKRL-------K 100
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G++ VEL KSNILL+GPTG GKTLLA+TLAR +VPF +ADATTLT+
Sbjct: 101 HGGKAGD----------VELAKSNILLVGPTGCGKTLLAQTLARTFDVPFTMADATTLTE 150
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+I+ KLL SDYNV AQ GIVYIDE+DKIT+KAE+ +I+RDVSGEGVQQA
Sbjct: 151 AGYVGEDVENIILKLLQASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQA 210
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I++R Q SIGFG
Sbjct: 211 LLKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIADRLQKRSIGFG 270
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
A V D L+E E DL+ +GLIPEFVGR PV+ +L L + L+ +
Sbjct: 271 AHV-------ADPDKRRIGELLEKGEPEDLLKFGLIPEFVGRLPVIATLRDLDTDALITI 323
Query: 549 LTEPKNALGKQYRKMFQMN 567
LTEPKNAL KQY K+F++
Sbjct: 324 LTEPKNALCKQYAKLFELE 342
>gi|430762035|ref|YP_007217892.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430011659|gb|AGA34411.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 425
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 225/308 (73%), Gaps = 27/308 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P+EI LD++VIGQ+ AKK+LSVAVYNHY R+ +S +
Sbjct: 62 DSLPKPREIRGILDEYVIGQDSAKKILSVAVYNHYKRLEAKSGK---------------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -DDVELSKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL SDY+V A+ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP
Sbjct: 165 LLQKSDYDVDKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGV 500
+G RKHP+ + +Q+DT++ILFICGGAF +EK I +R + IGF A VR+ R+G
Sbjct: 225 QGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSEKGGIGFSAEVRSKDKDRSG-- 282
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
S+ ++ +E+ DL+ YGLIPEFVGR PV +L L E LV +LT+P+NAL KQY
Sbjct: 283 ------SAWLQRLEAEDLVRYGLIPEFVGRLPVQATLEELDEAALVTILTQPRNALVKQY 336
Query: 561 RKMFQMNG 568
++F+M G
Sbjct: 337 HRLFEMEG 344
>gi|440781232|ref|ZP_20959574.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
pasteurianum DSM 525]
gi|440220837|gb|ELP60043.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
pasteurianum DSM 525]
Length = 434
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 225/304 (74%), Gaps = 26/304 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++VIGQE AKK L+VAVYNHY RI V ++
Sbjct: 60 LPKPIEIKNYLDQYVIGQEEAKKSLAVAVYNHYKRI-----------------NSNVSNE 102
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL+KSNILL+GPTGSGKTLLA+TLA+++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 103 DIELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLI 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 163 QNADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG-GVTDA 503
RKHP + IQI+T +ILFICGGAF I+K I R + SS+GFGA V++ GV
Sbjct: 223 GRKHPHQEFIQINTTNILFICGGAFDGIDKIIEHRTRTSSMGFGADVQSKKEKDIGV--- 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L++ + DL+ +GLIPEFVGR P+LV+L AL E L+++L++PKNAL KQY+K+
Sbjct: 280 -----LLKDIMPGDLLKFGLIPEFVGRLPILVTLDALDEKALIEILSKPKNALVKQYKKL 334
Query: 564 FQMN 567
FQM+
Sbjct: 335 FQMD 338
>gi|220927144|ref|YP_002502446.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
nodulans ORS 2060]
gi|254763854|sp|B8IN27.1|CLPX_METNO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219951751|gb|ACL62143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium nodulans ORS 2060]
Length = 423
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ+ AKKVLSVAV+NHY R+ + + +
Sbjct: 64 PTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAAKH-----------------ND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGFGA V+A D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA-------PDDRR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + VE DL+ +GLIPEFVGR PVL +L L E L ++L EPKNAL KQY+++F+
Sbjct: 280 TGEIFRNVEPEDLLKFGLIPEFVGRLPVLATLEDLDEIALKRILQEPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|206579207|ref|YP_002240082.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae 342]
gi|288936833|ref|YP_003440892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
variicola At-22]
gi|290510111|ref|ZP_06549481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. 1_1_55]
gi|238066657|sp|B5Y0U1.1|CLPX_KLEP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|206568265|gb|ACI10041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae 342]
gi|288891542|gb|ADC59860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
variicola At-22]
gi|289776827|gb|EFD84825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. 1_1_55]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FSLEG 345
>gi|134094957|ref|YP_001100032.1| ATP-dependent protease ATP-binding subunit ClpX [Herminiimonas
arsenicoxydans]
gi|166214778|sp|A4G5X0.1|CLPX_HERAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|133738860|emb|CAL61907.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Herminiimonas
arsenicoxydans]
Length = 422
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 218/304 (71%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+E+C+ LD++VIGQ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPQELCELLDQYVIGQNSAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVERAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + K ISER + S IGF A V++
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFSATVKSREERSA----- 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S +M E DLI +GLIPE VGR PV+ +L L E L+Q+L EPKNAL KQY K+
Sbjct: 283 --SQVMLDTEPEDLIKFGLIPELVGRLPVVATLRELDEEALIQILLEPKNALIKQYSKLL 340
Query: 565 QMNG 568
QM G
Sbjct: 341 QMEG 344
>gi|402486167|ref|ZP_10832999.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp. CCGE
510]
gi|401814823|gb|EJT07153.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp. CCGE
510]
Length = 425
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S GE
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASKN----GE------------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|417120998|ref|ZP_11970452.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0246]
gi|386148728|gb|EIG95163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0246]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 221/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G + +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN-----------------GDNSN 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|407789642|ref|ZP_11136742.1| ATP-dependent protease ATP-binding subunit ClpX [Gallaecimonas
xiamenensis 3-C-1]
gi|407206302|gb|EKE76260.1| ATP-dependent protease ATP-binding subunit ClpX [Gallaecimonas
xiamenensis 3-C-1]
Length = 423
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 219/307 (71%), Gaps = 25/307 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTPKEI LD FVIGQ+ AKKVL+VAVYNHY R+ N S
Sbjct: 63 DSLPTPKEIRNHLDDFVIGQDHAKKVLAVAVYNHYKRLRNPSH----------------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -DDVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY++ AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 165 LLQKCDYDIDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS-IGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K + R S IGFGA V+ G
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKIVDGRTATSKGIGFGAEVK------GDK 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D S L VE DL+ YGLIPEF+GR PV+ +L L E+ LVQ+L+EPKNAL KQY+
Sbjct: 279 DKASISELFRKVEPEDLVKYGLIPEFIGRLPVVATLDELDESALVQILSEPKNALTKQYQ 338
Query: 562 KMFQMNG 568
+F + G
Sbjct: 339 ALFSLEG 345
>gi|354567675|ref|ZP_08986843.1| ATP-dependent Clp protease ATP-binding subunit clpX [Fischerella
sp. JSC-11]
gi|353542133|gb|EHC11597.1| ATP-dependent Clp protease ATP-binding subunit clpX [Fischerella
sp. JSC-11]
Length = 446
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 220/305 (72%), Gaps = 15/305 (4%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI K LD+ VIGQ+ AKKVLSVAVYNHY KR A S G
Sbjct: 77 NQIPKPREIKKYLDEHVIGQDEAKKVLSVAVYNHY---------KRLAIVQSKNNGKGAT 127
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD VEL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 128 DDAVELQKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLR 187
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 188 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 247
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +EK + +R SIGF P G T
Sbjct: 248 QGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRTGKKSIGFVQP------GEGQTK 301
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ + +E DL+ +G+IPEF+GR P++ + L E L+ +LT+P++AL KQY+K
Sbjct: 302 EKRAADTLRHLEPDDLVKFGMIPEFIGRVPMVAVVDPLDEEALMAILTQPRSALVKQYQK 361
Query: 563 MFQMN 567
+ +M+
Sbjct: 362 LLKMD 366
>gi|304316360|ref|YP_003851505.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433654492|ref|YP_007298200.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302777862|gb|ADL68421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433292681|gb|AGB18503.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P PKEI + LD++VIGQ++AKK L+VAVYNHY RI + V
Sbjct: 59 ELPKPKEIKEFLDQYVIGQDKAKKALAVAVYNHYKRINSR-----------------VKS 101
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 102 DDVELQKSNILMLGPTGSGKTLLAQTLARMLNVPFAIADATSLTEAGYVGEDVENILLKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GIVYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV NVP +
Sbjct: 162 IQAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFI GGAF IEK I R S+GFG+ V++
Sbjct: 222 GGRKHPHQEFIQIDTTNILFIVGGAFDGIEKIIESRIGKKSLGFGSEVQSKQEKK----- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++ + DL+ +GLIPEF+GR P++V+L +L ++ L+++LTEPKNAL KQY K+
Sbjct: 277 --IGEILKNIMPEDLLKFGLIPEFIGRLPIVVTLDSLDKDALIRILTEPKNALTKQYEKL 334
Query: 564 FQMNG 568
F+++G
Sbjct: 335 FELDG 339
>gi|372268543|ref|ZP_09504591.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
S89]
Length = 427
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/306 (57%), Positives = 222/306 (72%), Gaps = 20/306 (6%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP+EI + LD++VIGQ RAKKVL+VAVYNHY R+ K G D
Sbjct: 62 SRLPTPQEITEILDQYVIGQARAKKVLAVAVYNHYKRLRTGKGVK------------GKD 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 D--VELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF ++K I +R + IGF A V++ +
Sbjct: 228 QGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKDSNSNFGE 287
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ +E DL+ YGLIPEFVGR PV +L L LVQ+LTEP+NAL KQY K
Sbjct: 288 VLL------DLEPEDLVRYGLIPEFVGRLPVTATLEELNRAALVQILTEPRNALTKQYGK 341
Query: 563 MFQMNG 568
+F M G
Sbjct: 342 LFDMEG 347
>gi|153813469|ref|ZP_01966137.1| hypothetical protein RUMOBE_03889 [Ruminococcus obeum ATCC 29174]
gi|149830413|gb|EDM85505.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruminococcus
obeum ATCC 29174]
Length = 437
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/301 (57%), Positives = 220/301 (73%), Gaps = 25/301 (8%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVE 327
P+EI K LD +VIGQ+ AKK LSVAVYNHY RI ++S D VE
Sbjct: 68 PEEIHKILDDYVIGQDEAKKALSVAVYNHYKRI------------TASKNLD------VE 109
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
L+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K++ +
Sbjct: 110 LQKSNILMLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKIIQAA 169
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
DY++ AQ GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G RK
Sbjct: 170 DYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKILEGTVASVPPQGGRK 229
Query: 448 HPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTS 507
HP + IQIDT +ILFICGGAF IEKTI R+ SIGFGA V V +
Sbjct: 230 HPHQEFIQIDTTNILFICGGAFDGIEKTIEARQDTKSIGFGADV-------SVQEERNIG 282
Query: 508 SLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+++ V D I YGLIPEF+GR P++V+L L E L+++L EPKN+L KQY K+F+++
Sbjct: 283 EILKDVMPEDFIKYGLIPEFIGRVPIVVTLDGLDEEALIRILKEPKNSLTKQYHKLFELD 342
Query: 568 G 568
G
Sbjct: 343 G 343
>gi|359396720|ref|ZP_09189771.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Halomonas
boliviensis LC1]
gi|357969398|gb|EHJ91846.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Halomonas
boliviensis LC1]
Length = 426
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 223/305 (73%), Gaps = 23/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTP+EI LD +VIGQ+RAK VLSVAVYNHY R+ + V
Sbjct: 63 ERLPTPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRLKTD-----------------VR 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 DGDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP
Sbjct: 166 LLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q++T +ILFI GGAF ++K I +R + IGF A V++ + GV
Sbjct: 226 QGGRKHPQQEFVQVNTGNILFIVGGAFAGLDKVIRDRAEKGGIGFNAAVKSKESSRGV-- 283
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DL+ +GLIPEFVGR P++ +L+ LTE+ LVQ+LTEPKN+L KQY K
Sbjct: 284 ----GELLADVEPDDLVKFGLIPEFVGRLPIIATLMELTEDALVQILTEPKNSLVKQYAK 339
Query: 563 MFQMN 567
+F+M
Sbjct: 340 LFEME 344
>gi|220909725|ref|YP_002485036.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
7425]
gi|219866336|gb|ACL46675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7425]
Length = 447
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 221/305 (72%), Gaps = 16/305 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P+EI K LD VIGQ+ AKK+LSVAVYNHY R+ Q + E
Sbjct: 79 SQIPKPREIKKYLDDHVIGQQEAKKILSVAVYNHYKRLSLLQEQSKGGAE---------- 128
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL+KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 129 -DAVELQKSNILLIGPTGCGKTLLAQTLARMLDVPFAVADATTLTEAGYVGEDVENILLR 187
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL VSD +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 188 LLQVSDLDVEQAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 247
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +EK + +R ++GF VR + G
Sbjct: 248 QGGRKHPYQDCIQIDTTNILFICGGAFVGLEKIVEQRTGKKAMGF---VREDGEPQGKEQ 304
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T+ ++ +E DL+ +G+IPEF+GR PVL + L E L ++LTEP+NAL KQY+K
Sbjct: 305 R--TADTLKHLEPEDLVKFGMIPEFIGRIPVLAVVDPLDEEALSEILTEPRNALVKQYQK 362
Query: 563 MFQMN 567
+ +M+
Sbjct: 363 LLKMD 367
>gi|86608810|ref|YP_477572.1| ATP-dependent protease ATP-binding subunit ClpX [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123502535|sp|Q2JLU2.1|CLPX_SYNJB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86557352|gb|ABD02309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 448
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 225/305 (73%), Gaps = 13/305 (4%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P+EI + LD++VIGQE+AKKVLSVAVYNHY KR A +++ + +
Sbjct: 78 QLPKPQEIMRYLDQYVIGQEKAKKVLSVAVYNHY---------KRLAAKANPGSVGVSEL 128
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNIL++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 129 DEVELQKSNILIIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRL 188
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 189 LQVADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQ 248
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQIDT +ILFICGGAFV +EK I +R S+GF P V+
Sbjct: 249 GGRKHPYQDCIQIDTSNILFICGGAFVGLEKVIEQRIGKKSMGFIKP----GEQLSVSRE 304
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ ++ +E DLI YG+IPEF GR PV+ +L L E L +LT+PKNA+ KQ +K+
Sbjct: 305 QRMANALKALEPEDLIKYGMIPEFTGRLPVVATLDPLDEKALEAILTQPKNAILKQAQKL 364
Query: 564 FQMNG 568
+M+G
Sbjct: 365 LRMDG 369
>gi|288941152|ref|YP_003443392.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Allochromatium
vinosum DSM 180]
gi|288896524|gb|ADC62360.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Allochromatium vinosum DSM 180]
Length = 419
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 221/306 (72%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N P P+EI LD+FVIGQE+AKKVLSVAVYNHY R+ E + D
Sbjct: 58 NHLPKPREINAKLDEFVIGQEKAKKVLSVAVYNHYKRL-----------EVAEAKED--- 103
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+E+ KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 104 ---IEIAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 160
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 161 LLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 220
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFI GGAF ++K I R + + IGF A V++ D
Sbjct: 221 QGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIQNRSKKTGIGFSAEVQSK------DD 274
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ S L+ VE DLI YGLIPEFVGR PV+ +L L E L+ +LTEPK+AL KQY +
Sbjct: 275 SRQISELLSAVEPEDLIRYGLIPEFVGRLPVMATLEELDEAALMLILTEPKHALVKQYAR 334
Query: 563 MFQMNG 568
+F+M G
Sbjct: 335 LFEMEG 340
>gi|188534631|ref|YP_001908428.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia
tasmaniensis Et1/99]
gi|188029673|emb|CAO97552.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Erwinia
tasmaniensis Et1/99]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVLSVAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K +S+R S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVK------GKSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|434388322|ref|YP_007098933.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Chamaesiphon
minutus PCC 6605]
gi|428019312|gb|AFY95406.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Chamaesiphon
minutus PCC 6605]
Length = 464
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/316 (54%), Positives = 226/316 (71%), Gaps = 17/316 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P+E+ K LD+ VIGQ+ AKKVLSV+VYNHY R+ ++ + +GV
Sbjct: 79 SQMPKPRELKKYLDEHVIGQDEAKKVLSVSVYNHYKRLSYAQAKSTPNATQPATGVNGVH 138
Query: 323 -----DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
DD VEL+KSNILL+GPTG GKT+LA+TLA+ ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 139 KANATDDGVELQKSNILLIGPTGCGKTMLAQTLAKVLDVPFAVADATTLTEAGYVGEDVE 198
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+
Sbjct: 199 NILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTI 258
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF---GAPVRAN 494
+VP +G RKHP D IQIDT +I+FICGGAFV +EK I +R S+GF G
Sbjct: 259 ASVPPQGGRKHPYQDCIQIDTSNIMFICGGAFVGLEKVIEQRMGKKSMGFIQQGETPNRE 318
Query: 495 MRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKN 554
RA + +M+ +E DL+ YGLIPEF+GR PV+ +L L EN LV +LTEP++
Sbjct: 319 QRA---------ADMMKHLEPEDLVKYGLIPEFIGRVPVIATLNPLDENTLVSILTEPRS 369
Query: 555 ALGKQYRKMFQMNGQA 570
AL KQY K+ M+ A
Sbjct: 370 ALVKQYEKLLHMDNVA 385
>gi|425078087|ref|ZP_18481190.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425088720|ref|ZP_18491813.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405591066|gb|EKB64579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405601812|gb|EKB74965.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FSLEG 345
>gi|352101156|ref|ZP_08958579.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
HAL1]
gi|350600640|gb|EHA16701.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
HAL1]
Length = 426
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 222/305 (72%), Gaps = 23/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTP+EI LD +VIGQ+RAK VLSVAVYNHY R+ + V
Sbjct: 63 ERLPTPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRLKTD-----------------VR 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 DGDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP
Sbjct: 166 LLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q++T +ILFI GGAF +EK I +R + IGF A V++ + GV
Sbjct: 226 QGGRKHPQQEFVQVNTGNILFIVGGAFAGLEKVIRDRAEKGGIGFNAAVKSKESSRGV-- 283
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DL+ +GLIPEFVGR P++ +L LTE+ LVQ+LTEPKN+L KQY K
Sbjct: 284 ----GELLADVEPDDLVKFGLIPEFVGRLPIIATLTELTEDALVQILTEPKNSLVKQYAK 339
Query: 563 MFQMN 567
+F+M
Sbjct: 340 LFEME 344
>gi|437849000|ref|ZP_20847210.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
gi|435338625|gb|ELP07836.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
Length = 365
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S+
Sbjct: 6 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTSNG-------- 49
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 50 -VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 108
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 109 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 168
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 169 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 222
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 223 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 282
Query: 564 FQMNG 568
F + G
Sbjct: 283 FNLEG 287
>gi|114767021|ref|ZP_01445929.1| ATP-dependent protease ATP-binding subunit [Pelagibaca bermudensis
HTCC2601]
gi|114540805|gb|EAU43869.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp.
HTCC2601]
Length = 421
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EIC LD +VIGQ AK+VLSVAV+NHY R+ + SQK S
Sbjct: 64 PSPREICDVLDDYVIGQAMAKRVLSVAVHNHYKRLNH--SQKSS---------------D 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + S++GFGA VR G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDPEERG------- 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + + +E DL+ +GLIPEFVGR PV+ +L L E+ LV +LT PKNAL KQY+++F+
Sbjct: 280 TGEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTAPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|408379475|ref|ZP_11177069.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
albertimagni AOL15]
gi|407746959|gb|EKF58481.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
albertimagni AOL15]
Length = 425
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 227/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ++AKK+LSVAV+NHY R+ + S G D
Sbjct: 67 PTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLSHASK--------------GGD--- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|269914470|pdb|3HTE|A Chain A, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914471|pdb|3HTE|B Chain B, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914472|pdb|3HTE|C Chain C, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914473|pdb|3HTE|D Chain D, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914474|pdb|3HTE|E Chain E, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914475|pdb|3HTE|F Chain F, Crystal Structure Of Nucleotide-Free Hexameric Clpx
Length = 363
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S+
Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTSNG-------- 46
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 47 -VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 105
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYID++DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 106 QKCDYDVQKAQRGIVYIDQIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 165
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 166 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 219
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 220 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 279
Query: 564 FQMNG 568
F + G
Sbjct: 280 FNLEG 284
>gi|163746711|ref|ZP_02154068.1| ATP-dependent protease ATP-binding subunit [Oceanibulbus indolifex
HEL-45]
gi|161379825|gb|EDQ04237.1| ATP-dependent protease ATP-binding subunit [Oceanibulbus indolifex
HEL-45]
Length = 422
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 224/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++IC LD +VIGQ AK+VLSVAV+NHY R+ + + G+
Sbjct: 64 PTPRDICGVLDDYVIGQAMAKRVLSVAVHNHYKRL----NHAQKGGD------------- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I+ R + S++GFGA VR N DA
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN-------DARG 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ LV +LTEPKNAL KQY+++F+
Sbjct: 280 IGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTEPKNALVKQYQRLFE 339
Query: 566 MN 567
+
Sbjct: 340 LE 341
>gi|398792057|ref|ZP_10552755.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
YR343]
gi|398214189|gb|EJN00772.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
YR343]
Length = 423
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|407974426|ref|ZP_11155335.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
indicus C115]
gi|407430115|gb|EKF42790.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
indicus C115]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/311 (56%), Positives = 229/311 (73%), Gaps = 29/311 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ AK+VLSVAV+NHY R+ + S +SA
Sbjct: 66 PTPQEIMTVLDDYVIGQSHAKRVLSVAVHNHYKRLAHAS---KSA--------------D 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGFGA V + + R G
Sbjct: 229 RKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGATVASPEDRRTG----- 283
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ +GLIPEFVGR PVL +L L E LVQ+L+EPKNAL KQY+++
Sbjct: 284 ----ELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILSEPKNALVKQYQRL 339
Query: 564 FQM-NGQAAFY 573
F+M N + F+
Sbjct: 340 FEMENVELTFH 350
>gi|359461616|ref|ZP_09250179.1| ATP-dependent protease ATP-binding subunit ClpX [Acaryochloris sp.
CCMEE 5410]
Length = 447
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/307 (55%), Positives = 224/307 (72%), Gaps = 19/307 (6%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P++I LD+ VIGQ+ AKKVLSVAVYNHY R+ + S E
Sbjct: 76 NQIPKPRDIKSYLDEHVIGQDEAKKVLSVAVYNHYKRLSISQASAESVAEL--------- 126
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD +EL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 127 DDAIELQKSNILLIGPTGCGKTLLAQTLAQMLDVPFAVADATTLTEAGYVGEDVENILLR 186
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 187 LLQVADLDVEEAQRGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 246
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF--GAPVRANMRAGGV 500
+G RKHP D IQIDT +ILFICGGAFV ++K I +R ++GF +RA +
Sbjct: 247 QGGRKHPYQDCIQIDTTNILFICGGAFVGLDKIIEQRTGKKAMGFIQDGELRAKEQR--- 303
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
T+ ++ +E+ DL+ +G+IPEF GR PV+ + AL E+ L Q+LTEP+NAL KQY
Sbjct: 304 -----TADMLRDLEAEDLVKFGMIPEFTGRIPVMSVIDALDEDVLCQILTEPRNALVKQY 358
Query: 561 RKMFQMN 567
+K+ +M+
Sbjct: 359 QKLLRMD 365
>gi|218549894|ref|YP_002383685.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ATCC 35469]
gi|422804517|ref|ZP_16852949.1| ATP-dependent Clp protease [Escherichia fergusonii B253]
gi|424817251|ref|ZP_18242402.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ECD227]
gi|226706591|sp|B7LME1.1|CLPX_ESCF3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218357435|emb|CAQ90074.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia fergusonii ATCC 35469]
gi|324114665|gb|EGC08633.1| ATP-dependent Clp protease [Escherichia fergusonii B253]
gi|325498271|gb|EGC96130.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ECD227]
Length = 424
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|269914476|pdb|3HWS|A Chain A, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914477|pdb|3HWS|B Chain B, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914478|pdb|3HWS|C Chain C, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914479|pdb|3HWS|D Chain D, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914480|pdb|3HWS|E Chain E, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914481|pdb|3HWS|F Chain F, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
Length = 363
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S+
Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTSNG-------- 46
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 47 -VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 105
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYID++DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 106 QKCDYDVQKAQRGIVYIDQIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 165
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 166 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 219
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 220 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 279
Query: 564 FQMNG 568
F + G
Sbjct: 280 FNLEG 284
>gi|194595679|gb|ACF77122.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense]
Length = 422
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I LD +VIGQ AK+VLSVAV+NHY R+ + G +
Sbjct: 64 PTPRDIHAVLDDYVIGQHHAKRVLSVAVHNHYKRLAH-----------------GTKHND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + +SIGFGA VR D
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRG-------PDERS 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PV+ +L L E LV++LT+PKNAL KQY+++F+
Sbjct: 280 TGDILREVEPEDLLKFGLIPEFIGRLPVVATLSDLDETALVEILTKPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|145589118|ref|YP_001155715.1| ATP-dependent protease ATP-binding subunit ClpX [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|226706594|sp|A4SXD7.1|CLPX_POLSQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145047524|gb|ABP34151.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 453
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/320 (55%), Positives = 221/320 (69%), Gaps = 28/320 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYN----------------ESSQKR 308
PTP EI LD++VIGQE AKK L+VAVYNHY R+ E+S K+
Sbjct: 65 LPTPHEIRGNLDQYVIGQEHAKKTLAVAVYNHYKRLQYLPKPKKEKLDKDGKPVEASDKK 124
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
+ + DGV EL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+
Sbjct: 125 ESKLPAKAIVDGV-----ELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTE 179
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+I+ KLL DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQA
Sbjct: 180 AGYVGEDVENIIQKLLQACDYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQA 239
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLK++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R + IGF
Sbjct: 240 LLKLVEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIQQRTAKTGIGFN 299
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
A V G S L+ VE DLI +GLIPE +GR PV+ +L L E L+Q+
Sbjct: 300 ATVPGKDERG-------VSDLLIEVEPEDLIKFGLIPELIGRLPVVATLAQLDEEALIQI 352
Query: 549 LTEPKNALGKQYRKMFQMNG 568
LTEPKNAL KQY+ + M G
Sbjct: 353 LTEPKNALVKQYQALLTMEG 372
>gi|383454038|ref|YP_005368027.1| ATP-dependent protease ATP-binding subunit ClpX [Corallococcus
coralloides DSM 2259]
gi|380732367|gb|AFE08369.1| ATP-dependent protease ATP-binding subunit ClpX [Corallococcus
coralloides DSM 2259]
Length = 427
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++V+GQERAKK LSVAV+NHY RI ++ +
Sbjct: 64 RIPRPSEIKAVLDEYVVGQERAKKTLSVAVHNHYKRIESKVAM----------------- 106
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+I+ L
Sbjct: 107 DDVELQKSNILLLGPTGSGKTLLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNL 166
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D+++ AQ+GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGTV NVP K
Sbjct: 167 LQAADHDIERAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKIIEGTVANVPPK 226
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +E+ I R S+GFGA +++ +
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFGGLEQVIERRLGGRSLGFGAEIQSRKQRN----- 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L++ VE DL+ +G+IPEF+GR P++ +L L E LV +L EPKNAL KQYRK+
Sbjct: 282 --LSELLKHVEPEDLLKFGMIPEFIGRLPIITALEELDEGALVNILGEPKNALTKQYRKL 339
Query: 564 FQMNG 568
F+++G
Sbjct: 340 FELDG 344
>gi|417831546|ref|ZP_12478068.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 01-09591]
gi|340735698|gb|EGR64754.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 01-09591]
Length = 410
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 50 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 92
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 93 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 152
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 153 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 212
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 213 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 266
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 267 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 326
Query: 564 FQMNG 568
F + G
Sbjct: 327 FNLEG 331
>gi|241764197|ref|ZP_04762231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
delafieldii 2AN]
gi|241366474|gb|EER60978.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
delafieldii 2AN]
Length = 421
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQ++AK+ L+VAVYNHY R+ ++ D D
Sbjct: 65 LPTPVEIKANLDNYVIGQDQAKRTLAVAVYNHYKRLRHK---------------DKAHKD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + +E DLI +GLIPE VGR PV+ +L L+E+ LVQ+LTEPKNAL KQY K+
Sbjct: 284 -LTEVFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|398798175|ref|ZP_10557476.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
GM01]
gi|398100892|gb|EJL91120.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
GM01]
Length = 423
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|359783253|ref|ZP_09286469.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
psychrotolerans L19]
gi|359368904|gb|EHK69479.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
psychrotolerans L19]
Length = 426
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/307 (56%), Positives = 223/307 (72%), Gaps = 24/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQ+RAK+VL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISAILDQYVIGQQRAKRVLAVAVYNHYKRL-NQREKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERR-QDSSIGFGAPVRANMRAGGV 500
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R + IGF A VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQNRSTKGGGIGFNAEVRSQELGKKI 284
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
++ + E DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY
Sbjct: 285 GES------LRDAEPEDLVKFGLIPEFVGRLPVIATLDELDEPALMQILTEPKNALTKQY 338
Query: 561 RKMFQMN 567
K+F+M
Sbjct: 339 AKLFEME 345
>gi|170767649|ref|ZP_02902102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
albertii TW07627]
gi|170123137|gb|EDS92068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
albertii TW07627]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|420334605|ref|ZP_14836227.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-315]
gi|391268296|gb|EIQ27224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-315]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGAKVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|416287649|ref|ZP_11648935.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
boydii ATCC 9905]
gi|320178280|gb|EFW53254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
boydii ATCC 9905]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|429731273|ref|ZP_19265912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Corynebacterium durum F0235]
gi|429146126|gb|EKX89187.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Corynebacterium durum F0235]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 222/305 (72%), Gaps = 17/305 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
NK P P EI LD++VIGQ+ AK+VL+VAVYNHY RI E Q +
Sbjct: 61 NKLPRPTEISAFLDQYVIGQDDAKRVLAVAVYNHYKRIRAEEQQTAKINK---------- 110
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD VEL KSNILL+GPTGSGKT LA+TLA+ ++VPF IADAT+LT+AGYVGEDVE+IL K
Sbjct: 111 DDEVELAKSNILLLGPTGSGKTYLAQTLAKLLDVPFAIADATSLTEAGYVGEDVENILLK 170
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL SDY+V AQ+GI+YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK+LEGT +VP
Sbjct: 171 LLQASDYDVQRAQRGIIYIDEVDKISRKSENPSITRDVSGEGVQQALLKILEGTTASVPP 230
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQ+DT +ILF+ GAF +EK I +R +GFGA VR+ VTD
Sbjct: 231 QGGRKHPNQDFIQLDTSNILFVVAGAFAGLEKVIQDRVGKKGLGFGAEVRS------VTD 284
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
V T ++ + V DL+ +GLIPEF+GR PV+ ++ L LV+VLTEPKN+L +QY K
Sbjct: 285 -VDTVNVFKDVLPEDLVKFGLIPEFIGRLPVVATVTNLDRTSLVRVLTEPKNSLVRQYEK 343
Query: 563 MFQMN 567
+F+M+
Sbjct: 344 LFEMD 348
>gi|333897650|ref|YP_004471524.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacterium xylanolyticum LX-11]
gi|390934516|ref|YP_006392021.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|333112915|gb|AEF17852.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium xylanolyticum LX-11]
gi|389570017|gb|AFK86422.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P PKEI + LD++VIGQ++AKK L+VAVYNHY RI + V
Sbjct: 59 ELPKPKEIKEFLDQYVIGQDKAKKALAVAVYNHYKRINSR-----------------VKS 101
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 102 DDVELQKSNILMLGPTGSGKTLLAQTLARMLNVPFAIADATSLTEAGYVGEDVENILLKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GIVYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV NVP +
Sbjct: 162 IQAADYDIEKAEKGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFI GGAF IEK I R S+GFG+ +++
Sbjct: 222 GGRKHPHQEFIQIDTTNILFIVGGAFDGIEKIIESRIGKKSLGFGSEIQSKQEKK----- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++ + DL+ +GLIPEF+GR P++V+L +L ++ L+++LTEPKNAL KQY K+
Sbjct: 277 --IGEILKNIMPEDLLKFGLIPEFIGRLPIVVTLDSLDKDALIRILTEPKNALTKQYEKL 334
Query: 564 FQMNG 568
F+++G
Sbjct: 335 FELDG 339
>gi|417860287|ref|ZP_12505343.1| ATP-dependent protease ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|418296069|ref|ZP_12907913.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens CCNWGS0286]
gi|338823351|gb|EGP57319.1| ATP-dependent protease ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|355539501|gb|EHH08739.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens CCNWGS0286]
Length = 425
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/302 (55%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ++AKK+LSVAV+NHY R+ + S +
Sbjct: 67 PTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHASK-----------------NGD 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|260768946|ref|ZP_05877880.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
furnissii CIP 102972]
gi|375131468|ref|YP_004993568.1| ATP-dependent protease ATP-binding subunit [Vibrio furnissii NCTC
11218]
gi|260616976|gb|EEX42161.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
furnissii CIP 102972]
gi|315180642|gb|ADT87556.1| ATP-dependent protease ATP-binding subunit [Vibrio furnissii NCTC
11218]
Length = 426
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 224/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD +VIGQE AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPREIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ + +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKDESKSL--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L VE DL+ YGLIPEF+GR PV +L L + L+Q+L EPKNAL KQY +
Sbjct: 286 ---SELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDQEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|407071671|ref|ZP_11102509.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
cyclitrophicus ZF14]
Length = 426
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 220/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD +VIGQE AKKVL+VAVYNHY R+ N T +GV
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRN-----------GDTTAEGV--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + S IGFGA VR+ +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK------DET 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|320102131|ref|YP_004177722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Isosphaera
pallida ATCC 43644]
gi|319749413|gb|ADV61173.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Isosphaera
pallida ATCC 43644]
Length = 478
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/315 (55%), Positives = 227/315 (72%), Gaps = 26/315 (8%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG +L + P P+EI LD++VIGQ+RAKKVLSVAV+NHY R+ ++ +
Sbjct: 78 GGRSLFGEIPNPREIKAQLDQYVIGQDRAKKVLSVAVHNHYKRLVHDEEPE--------- 128
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
TD VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF I DATTLT+AGYVGEDV
Sbjct: 129 -TD------VELDKSNILLIGPTGSGKTLLARTLARVLNVPFAIGDATTLTEAGYVGEDV 181
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+IL KLL +++++ AAQ+GIVYIDE+DKI K + +++I+RDVSGEGVQQALLKMLEGT
Sbjct: 182 ENILLKLLHAANFDLEAAQRGIVYIDEIDKIGKTSHNVSITRDVSGEGVQQALLKMLEGT 241
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V NVP +G RKHP IQ+DT +ILFICGG FV ++ I+ R +IGFG
Sbjct: 242 VANVPPQGGRKHPEQQYIQMDTTNILFICGGTFVGLDNIIARRIGRKTIGFGG------- 294
Query: 497 AGGVTDAVVT---SSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
A G +D+ + L+ V S D++ +GLIPEF+GR PV+ L+ L LVQ+LTEP+
Sbjct: 295 AMGDSDSAREKNLADLLNQVTSDDVLEFGLIPEFIGRLPVICPLMPLDVEALVQILTEPR 354
Query: 554 NALGKQYRKMFQMNG 568
NAL KQY+++F+M G
Sbjct: 355 NALVKQYQRLFEMEG 369
>gi|399038247|ref|ZP_10734548.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF122]
gi|398063910|gb|EJL55617.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF122]
Length = 425
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 227/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + + +
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHATK-----------------NSE 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|416273476|ref|ZP_11643391.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
dysenteriae CDC 74-1112]
gi|420378676|ref|ZP_14878175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 225-75]
gi|320173742|gb|EFW48925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
dysenteriae CDC 74-1112]
gi|391306909|gb|EIQ64657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 225-75]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|290969193|ref|ZP_06560718.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
genomosp. type_1 str. 28L]
gi|335049524|ref|ZP_08542514.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 199-6]
gi|290780699|gb|EFD93302.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
genomosp. type_1 str. 28L]
gi|333762784|gb|EGL40269.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 199-6]
Length = 410
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/303 (55%), Positives = 220/303 (72%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD++VIGQE AKK L+VAVYNHY R+ + + D D
Sbjct: 59 LPTPHEIKATLDEYVIGQEAAKKTLAVAVYNHYKRLQSNT-----------------DAD 101
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+ L KL+
Sbjct: 102 DVELQKSNVVMVGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENCLLKLI 161
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ AQ+GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGTV VP +G
Sbjct: 162 QAADYDIEKAQRGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVAGVPPQG 221
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF I+KTI +R D +GFGA V++ +
Sbjct: 222 GRKHPHQDMLQIDTTNILFICGGAFDGIDKTIQKRISDKKMGFGADVQSKSKKA------ 275
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+L++ + DL +GLIPE +GR PVLV+L L E +V +LTEPKNAL KQY+KM
Sbjct: 276 -LKTLLKDIIPVDLQKFGLIPELIGRLPVLVTLDPLDEEAMVHILTEPKNALVKQYQKML 334
Query: 565 QMN 567
+M+
Sbjct: 335 KMD 337
>gi|404369990|ref|ZP_10975317.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
sp. 7_2_43FAA]
gi|226913879|gb|EEH99080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
sp. 7_2_43FAA]
Length = 431
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 228/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P EI LD++VIGQE+AKK LSVAVYNHY RI ++ +DDD
Sbjct: 61 PKPNEIKNYLDQYVIGQEKAKKSLSVAVYNHYKRI----------------NSNLIDDD- 103
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL+KSNILL+GPTGSGKTLLA+TLA+++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 IELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 164 SADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGG 223
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + +QI+T +ILFICGGAF ++K I +R + SSIGFG AN+ + D
Sbjct: 224 RKHPHQEFLQINTSNILFICGGAFDGVDKIIEKRTEKSSIGFG----ANITSRHTKD--- 276
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L++ + SDL+ +GLIPEFVGR PV+V+L +L + LV +LT+PKNAL KQYRK+F+
Sbjct: 277 VGKLLKDIMPSDLLKFGLIPEFVGRLPVVVTLESLDNDALVNILTQPKNALVKQYRKLFE 336
Query: 566 MN 567
++
Sbjct: 337 ID 338
>gi|357031708|ref|ZP_09093651.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
morbifer G707]
gi|356414938|gb|EHH68582.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
morbifer G707]
Length = 422
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 230/305 (75%), Gaps = 28/305 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEICK LD +VIGQ AK+ LSVAV+NHY R+ + AG+S+
Sbjct: 64 PTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLSH-------AGKSND---------- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVDRAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRAN--MRAGGVTDA 503
RKHP+ + +Q+DT ++LFICGGAF ++K I R + S IGFGA VR++ R G
Sbjct: 227 RKHPQQEFLQVDTTNMLFICGGAFSGLDKIIVARGKGSGIGFGADVRSDEERRLG----- 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++++VE DL+ +GLIPEF+GR PV+ +L L E L+Q+L++PKNAL KQY ++
Sbjct: 282 ----AILQSVEPEDLLKFGLIPEFIGRLPVIAALNDLDEAALIQILSKPKNALVKQYARL 337
Query: 564 FQMNG 568
F+M G
Sbjct: 338 FEMEG 342
>gi|393718796|ref|ZP_10338723.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
echinoides ATCC 14820]
Length = 422
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/302 (58%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ+RAK+VLSVAV+NHY R+ + QK G D
Sbjct: 65 PTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNH--GQK------------GAD--- 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I +R Q SIGFGA V + +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAYVAS-------PEERR 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++VE DL+ +GLIPEFVGR PV+ +L L LV +LTEPKNAL KQY+K+F
Sbjct: 281 TGETLKSVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNALVKQYQKLFD 340
Query: 566 MN 567
M
Sbjct: 341 ME 342
>gi|148977889|ref|ZP_01814442.1| ATP-dependent protease ATP-binding subunit [Vibrionales bacterium
SWAT-3]
gi|145962835|gb|EDK28107.1| ATP-dependent protease ATP-binding subunit [Vibrionales bacterium
SWAT-3]
Length = 426
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 220/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD +VIGQE AKKVL+VAVYNHY R+ N T +GV
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRN-----------GDTTAEGV--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + S IGFGA VR+ +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK------DET 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|86148884|ref|ZP_01067135.1| ATP-dependent protease ATP-binding subunit [Vibrio sp. MED222]
gi|218710173|ref|YP_002417794.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
LGP32]
gi|254763873|sp|B7VHZ9.1|CLPX_VIBSL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|85833327|gb|EAQ51534.1| ATP-dependent protease ATP-binding subunit [Vibrio sp. MED222]
gi|218323192|emb|CAV19369.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
splendidus LGP32]
Length = 426
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 220/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD +VIGQE AKKVL+VAVYNHY R+ N T +GV
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRN-----------GDTTAEGV--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + S IGFGA VR+ +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK------DET 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|349699183|ref|ZP_08900812.1| Clp protease ATP-binding subunit [Gluconacetobacter europaeus LMG
18494]
Length = 419
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 227/302 (75%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EICK LD +VIGQ AKKVLSVAV+NHY R+ + +QK ++
Sbjct: 63 PTPREICKILDDYVIGQGHAKKVLSVAVHNHYKRLAH--AQK---------------NND 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT ++LFICGGAF ++K IS R + S IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS-------PDERR 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY ++FQ
Sbjct: 279 MGAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLFQ 338
Query: 566 MN 567
M
Sbjct: 339 ME 340
>gi|15800168|ref|NP_286180.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EDL933]
gi|15829746|ref|NP_308519.1| ATP-dependent protease ATP-binding protein ClpX [Escherichia coli
O157:H7 str. Sakai]
gi|16128423|ref|NP_414972.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MG1655]
gi|24111822|ref|NP_706332.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
2a str. 301]
gi|26246449|ref|NP_752488.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CFT073]
gi|30061940|ref|NP_836111.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
2a str. 2457T]
gi|74311013|ref|YP_309432.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella sonnei
Ss046]
gi|82775655|ref|YP_402002.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella
dysenteriae Sd197]
gi|91209512|ref|YP_539498.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UTI89]
gi|110640699|ref|YP_668427.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
536]
gi|110804466|ref|YP_687986.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5 str. 8401]
gi|117622698|ref|YP_851611.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O1]
gi|157157655|ref|YP_001461625.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
E24377A]
gi|157159965|ref|YP_001457283.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HS]
gi|168754543|ref|ZP_02779550.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4401]
gi|168768393|ref|ZP_02793400.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4486]
gi|168778931|ref|ZP_02803938.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4076]
gi|168786289|ref|ZP_02811296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC869]
gi|170021189|ref|YP_001726143.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
ATCC 8739]
gi|170080024|ref|YP_001729344.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. K-12 substr. DH10B]
gi|170682782|ref|YP_001742582.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SMS-3-5]
gi|187730793|ref|YP_001879149.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella boydii
CDC 3083-94]
gi|188492973|ref|ZP_03000243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 53638]
gi|193064164|ref|ZP_03045248.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E22]
gi|208807403|ref|ZP_03249740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4206]
gi|208814875|ref|ZP_03256054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4045]
gi|208822907|ref|ZP_03263225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4042]
gi|209398902|ref|YP_002269085.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EC4115]
gi|209917655|ref|YP_002291739.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SE11]
gi|215485519|ref|YP_002327950.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O127:H6 str. E2348/69]
gi|217325849|ref|ZP_03441933.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. TW14588]
gi|218553005|ref|YP_002385918.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
IAI1]
gi|218557348|ref|YP_002390261.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
S88]
gi|218688302|ref|YP_002396514.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
ED1a]
gi|218693901|ref|YP_002401568.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
55989]
gi|218698650|ref|YP_002406279.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
IAI39]
gi|218703722|ref|YP_002411241.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UMN026]
gi|222155228|ref|YP_002555367.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli LF82]
gi|227884551|ref|ZP_04002356.1| ATP-dependent protease ATP-binding subunit [Escherichia coli 83972]
gi|237707567|ref|ZP_04538048.1| ATP-dependent protease ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|238899726|ref|YP_002925522.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
BW2952]
gi|251783946|ref|YP_002998250.1| clpX, subunit of ClpX ATP-dependent protease specificity component
and chaperone, ClpXP and ClpAXP [Escherichia coli
BL21(DE3)]
gi|253774573|ref|YP_003037404.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160507|ref|YP_003043615.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli B
str. REL606]
gi|254287311|ref|YP_003053059.1| ATP-dependent protease ATP-binding subunit [Escherichia coli
BL21(DE3)]
gi|254791622|ref|YP_003076459.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. TW14359]
gi|260842639|ref|YP_003220417.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O103:H2 str. 12009]
gi|260853661|ref|YP_003227552.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. 11368]
gi|260866599|ref|YP_003233001.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O111:H- str. 11128]
gi|261223921|ref|ZP_05938202.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. FRIK2000]
gi|261256365|ref|ZP_05948898.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. FRIK966]
gi|291281345|ref|YP_003498163.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli O55:H7 str. CB9615]
gi|293403559|ref|ZP_06647650.1| ClpX [Escherichia coli FVEC1412]
gi|293408588|ref|ZP_06652427.1| ATP-dependent Clp protease [Escherichia coli B354]
gi|293413693|ref|ZP_06656342.1| ATP-dependent Clp protease [Escherichia coli B185]
gi|293418509|ref|ZP_06660944.1| ATP-dependent Clp protease [Escherichia coli B088]
gi|298379171|ref|ZP_06989052.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli FVEC1302]
gi|300818230|ref|ZP_07098441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 107-1]
gi|300820316|ref|ZP_07100468.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 119-7]
gi|300900509|ref|ZP_07118676.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 198-1]
gi|300903294|ref|ZP_07121222.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 84-1]
gi|300918179|ref|ZP_07134786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 115-1]
gi|300924165|ref|ZP_07140157.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 182-1]
gi|300937055|ref|ZP_07151921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 21-1]
gi|300947909|ref|ZP_07162057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 116-1]
gi|300958006|ref|ZP_07170170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 175-1]
gi|300988007|ref|ZP_07178487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 45-1]
gi|300997373|ref|ZP_07181713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 200-1]
gi|301022568|ref|ZP_07186440.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 69-1]
gi|301025666|ref|ZP_07189184.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 196-1]
gi|301301589|ref|ZP_07207724.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 124-1]
gi|301647364|ref|ZP_07247176.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 146-1]
gi|306813094|ref|ZP_07447287.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
NC101]
gi|307312184|ref|ZP_07591820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli W]
gi|309787030|ref|ZP_07681642.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 1617]
gi|309794829|ref|ZP_07689250.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 145-7]
gi|312964537|ref|ZP_07778793.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2362-75]
gi|312970534|ref|ZP_07784715.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1827-70]
gi|331640958|ref|ZP_08342093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H736]
gi|331645614|ref|ZP_08346718.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M605]
gi|331651376|ref|ZP_08352401.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M718]
gi|331656495|ref|ZP_08357457.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA206]
gi|331661819|ref|ZP_08362742.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA143]
gi|331666793|ref|ZP_08367667.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA271]
gi|331671985|ref|ZP_08372781.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA280]
gi|331676110|ref|ZP_08376822.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H591]
gi|331681833|ref|ZP_08382466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H299]
gi|332281589|ref|ZP_08394002.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Shigella sp. D9]
gi|378714156|ref|YP_005279049.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KO11FL]
gi|383177028|ref|YP_005455033.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella sonnei
53G]
gi|384541994|ref|YP_005726055.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shigella
flexneri 2002017]
gi|386279463|ref|ZP_10057144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 4_1_40B]
gi|386596686|ref|YP_006093086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|386598155|ref|YP_006099661.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli IHE3034]
gi|386605608|ref|YP_006111908.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UM146]
gi|386607801|ref|YP_006123287.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli W]
gi|386612633|ref|YP_006132299.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli UMNK88]
gi|386622810|ref|YP_006142538.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O7:K1 str. CE10]
gi|386628027|ref|YP_006147747.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i2']
gi|386632947|ref|YP_006152666.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i14']
gi|386637853|ref|YP_006104651.1| ATP-dependent specificity component of ClpP serine protease
[Escherichia coli ABU 83972]
gi|386702755|ref|YP_006166592.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KO11FL]
gi|386708241|ref|YP_006171962.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W]
gi|387505456|ref|YP_006157712.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. RM12579]
gi|387605948|ref|YP_006094804.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
042]
gi|387610963|ref|YP_006114079.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
ETEC H10407]
gi|387615755|ref|YP_006118777.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O83:H1 str. NRG 857C]
gi|387620197|ref|YP_006127824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|388476544|ref|YP_488730.1| ATPase and-specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. W3110]
gi|404373760|ref|ZP_10978995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 1_1_43]
gi|407467888|ref|YP_006785670.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483382|ref|YP_006780531.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483934|ref|YP_006771480.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|414574651|ref|ZP_11431860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3233-85]
gi|415777141|ref|ZP_11488393.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3431]
gi|415790317|ref|ZP_11494959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa14]
gi|415801141|ref|ZP_11499542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E128010]
gi|415814598|ref|ZP_11506196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli LT-68]
gi|415821037|ref|ZP_11510051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1180]
gi|415828316|ref|ZP_11514913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1357]
gi|415836284|ref|ZP_11518696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli RN587/1]
gi|415852352|ref|ZP_11528728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 53G]
gi|415859378|ref|ZP_11533653.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2a str. 2457T]
gi|415862716|ref|ZP_11536156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 85-1]
gi|415873839|ref|ZP_11541012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 79-10]
gi|416296134|ref|ZP_11651340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
flexneri CDC 796-83]
gi|416312993|ref|ZP_11657928.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1044]
gi|416316809|ref|ZP_11659941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC1212]
gi|416325623|ref|ZP_11666031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1125]
gi|416334478|ref|ZP_11671386.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli WV_060327]
gi|416341382|ref|ZP_11676005.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli EC4100B]
gi|416780507|ref|ZP_11876893.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. G5101]
gi|416791659|ref|ZP_11881792.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. 493-89]
gi|416803302|ref|ZP_11886653.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. H 2687]
gi|416811873|ref|ZP_11890146.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. 3256-97]
gi|416822834|ref|ZP_11895161.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. USDA 5905]
gi|416835008|ref|ZP_11901256.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. LSU-61]
gi|416895868|ref|ZP_11925752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_7v]
gi|417114411|ref|ZP_11965682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2741]
gi|417132697|ref|ZP_11977482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0588]
gi|417139479|ref|ZP_11982901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0259]
gi|417144119|ref|ZP_11985925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2264]
gi|417152749|ref|ZP_11991540.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0497]
gi|417168503|ref|ZP_12000954.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0741]
gi|417173403|ref|ZP_12003199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2608]
gi|417179144|ref|ZP_12007244.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0624]
gi|417191047|ref|ZP_12013643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0522]
gi|417218200|ref|ZP_12023802.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli JB1-95]
gi|417224452|ref|ZP_12027743.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.154]
gi|417229525|ref|ZP_12031111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0959]
gi|417246915|ref|ZP_12040016.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 9.0111]
gi|417252909|ref|ZP_12044668.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0967]
gi|417260706|ref|ZP_12048204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.3916]
gi|417267718|ref|ZP_12055079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.3884]
gi|417270523|ref|ZP_12057876.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.4168]
gi|417275380|ref|ZP_12062717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2303]
gi|417284656|ref|ZP_12071951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3003]
gi|417288855|ref|ZP_12076140.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07793]
gi|417292982|ref|ZP_12080262.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli B41]
gi|417299497|ref|ZP_12086727.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 900105 (10e)]
gi|417306940|ref|ZP_12093820.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli PCN033]
gi|417579662|ref|ZP_12230484.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_B2F1]
gi|417585233|ref|ZP_12236013.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_C165-02]
gi|417590121|ref|ZP_12240841.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2534-86]
gi|417595363|ref|ZP_12246033.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3030-1]
gi|417600720|ref|ZP_12251305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_94C]
gi|417606430|ref|ZP_12256959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_DG131-3]
gi|417611471|ref|ZP_12261945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_EH250]
gi|417616827|ref|ZP_12267261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli G58-1]
gi|417621707|ref|ZP_12272036.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_H.1.8]
gi|417627381|ref|ZP_12277628.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_MHI813]
gi|417632923|ref|ZP_12283144.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_S1191]
gi|417637738|ref|ZP_12287913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TX1999]
gi|417661014|ref|ZP_12310595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli AA86]
gi|417665524|ref|ZP_12315091.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_O31]
gi|417680501|ref|ZP_12329886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 3594-74]
gi|417688201|ref|ZP_12337447.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 5216-82]
gi|417700468|ref|ZP_12349608.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-218]
gi|417705976|ref|ZP_12355041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri VA-6]
gi|417710995|ref|ZP_12360002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-272]
gi|417715956|ref|ZP_12364889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-227]
gi|417721393|ref|ZP_12370239.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-304]
gi|417726777|ref|ZP_12375521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-671]
gi|417731998|ref|ZP_12380669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2747-71]
gi|417737259|ref|ZP_12385865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 4343-70]
gi|417741877|ref|ZP_12390429.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2930-71]
gi|417754234|ref|ZP_12402329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2B]
gi|417803794|ref|ZP_12450829.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. LB226692]
gi|417826440|ref|ZP_12473018.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri J1713]
gi|417867744|ref|ZP_12512779.1| clpX [Escherichia coli O104:H4 str. C227-11]
gi|417945742|ref|ZP_12588971.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH140A]
gi|417976588|ref|ZP_12617380.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH001]
gi|418042555|ref|ZP_12680748.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W26]
gi|418253618|ref|ZP_12878643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 6603-63]
gi|418262478|ref|ZP_12883857.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei str. Moseley]
gi|418301289|ref|ZP_12913083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNF18]
gi|418941048|ref|ZP_13494388.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H43 str. T22]
gi|418959267|ref|ZP_13511166.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J53]
gi|418995501|ref|ZP_13543115.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1A]
gi|419000595|ref|ZP_13548157.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1B]
gi|419006129|ref|ZP_13553585.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1C]
gi|419011996|ref|ZP_13559361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1D]
gi|419016900|ref|ZP_13564226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1E]
gi|419022591|ref|ZP_13569833.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2A]
gi|419027402|ref|ZP_13574602.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2C]
gi|419033514|ref|ZP_13580612.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2D]
gi|419038182|ref|ZP_13585242.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2E]
gi|419043547|ref|ZP_13590521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3A]
gi|419049040|ref|ZP_13595959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3B]
gi|419055095|ref|ZP_13601953.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3C]
gi|419060689|ref|ZP_13607474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3D]
gi|419066567|ref|ZP_13613248.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3E]
gi|419073421|ref|ZP_13618994.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3F]
gi|419078752|ref|ZP_13624237.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4A]
gi|419084403|ref|ZP_13629819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4B]
gi|419090489|ref|ZP_13635809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4C]
gi|419096619|ref|ZP_13641863.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4D]
gi|419102073|ref|ZP_13647240.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4E]
gi|419107526|ref|ZP_13652636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4F]
gi|419113293|ref|ZP_13658328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5A]
gi|419118879|ref|ZP_13663864.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5B]
gi|419124571|ref|ZP_13669475.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5C]
gi|419130099|ref|ZP_13674952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5D]
gi|419134857|ref|ZP_13679666.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5E]
gi|419140969|ref|ZP_13685726.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6A]
gi|419146494|ref|ZP_13691190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6B]
gi|419152271|ref|ZP_13696859.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6C]
gi|419157779|ref|ZP_13702305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6D]
gi|419162711|ref|ZP_13707191.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6E]
gi|419168434|ref|ZP_13712832.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7A]
gi|419173777|ref|ZP_13717633.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7B]
gi|419179427|ref|ZP_13723052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7C]
gi|419184985|ref|ZP_13728507.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7D]
gi|419190233|ref|ZP_13733701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7E]
gi|419195535|ref|ZP_13738943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8A]
gi|419201541|ref|ZP_13744769.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8B]
gi|419207439|ref|ZP_13750567.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8C]
gi|419213879|ref|ZP_13756911.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8D]
gi|419219703|ref|ZP_13762660.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8E]
gi|419225167|ref|ZP_13768057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9A]
gi|419230952|ref|ZP_13773744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9B]
gi|419236286|ref|ZP_13779037.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9C]
gi|419241880|ref|ZP_13784530.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9D]
gi|419247289|ref|ZP_13789904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9E]
gi|419253065|ref|ZP_13795615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10A]
gi|419259074|ref|ZP_13801534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10B]
gi|419264949|ref|ZP_13807336.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10C]
gi|419270762|ref|ZP_13813095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10D]
gi|419276560|ref|ZP_13818830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10E]
gi|419282162|ref|ZP_13824384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10F]
gi|419287903|ref|ZP_13830021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11A]
gi|419293242|ref|ZP_13835303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11B]
gi|419298682|ref|ZP_13840700.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11C]
gi|419304966|ref|ZP_13846880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11D]
gi|419309991|ref|ZP_13851868.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11E]
gi|419315310|ref|ZP_13857138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12A]
gi|419321086|ref|ZP_13862829.1| ATP-dependent protease Clp, ATPase subunit [Escherichia coli
DEC12B]
gi|419327333|ref|ZP_13868966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12C]
gi|419332743|ref|ZP_13874307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12D]
gi|419339679|ref|ZP_13881156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12E]
gi|419344086|ref|ZP_13885470.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13A]
gi|419348519|ref|ZP_13889872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13B]
gi|419353422|ref|ZP_13894708.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13C]
gi|419358765|ref|ZP_13899996.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13D]
gi|419363727|ref|ZP_13904909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13E]
gi|419368722|ref|ZP_13909851.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14A]
gi|419373907|ref|ZP_13914963.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14B]
gi|419379325|ref|ZP_13920306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14C]
gi|419384581|ref|ZP_13925485.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14D]
gi|419389855|ref|ZP_13930694.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15A]
gi|419395027|ref|ZP_13935812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15B]
gi|419400378|ref|ZP_13941112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15C]
gi|419405550|ref|ZP_13946254.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15D]
gi|419411044|ref|ZP_13951717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15E]
gi|419699354|ref|ZP_14226970.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SCI-07]
gi|419805362|ref|ZP_14330500.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AI27]
gi|419811817|ref|ZP_14336689.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O32:H37 str. P4]
gi|419862465|ref|ZP_14385070.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H25 str. CVM9340]
gi|419867897|ref|ZP_14390211.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H2 str. CVM9450]
gi|419876970|ref|ZP_14398629.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9534]
gi|419882603|ref|ZP_14403813.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9545]
gi|419888440|ref|ZP_14408947.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9570]
gi|419893035|ref|ZP_14413041.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9574]
gi|419900592|ref|ZP_14420018.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9942]
gi|419906389|ref|ZP_14425301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10026]
gi|419915476|ref|ZP_14433841.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD1]
gi|419916843|ref|ZP_14435127.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD2]
gi|419923188|ref|ZP_14441150.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-15]
gi|419928056|ref|ZP_14445776.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-1]
gi|419937106|ref|ZP_14454022.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
576-1]
gi|419941390|ref|ZP_14458079.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
75]
gi|419945557|ref|ZP_14461996.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HM605]
gi|419948923|ref|ZP_14465186.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CUMT8]
gi|420088257|ref|ZP_14600161.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9602]
gi|420092933|ref|ZP_14604623.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9634]
gi|420103063|ref|ZP_14613977.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9455]
gi|420109691|ref|ZP_14619791.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9553]
gi|420113373|ref|ZP_14623116.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10021]
gi|420119641|ref|ZP_14628906.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10030]
gi|420125720|ref|ZP_14634511.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10224]
gi|420130829|ref|ZP_14639309.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9952]
gi|420267877|ref|ZP_14770284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA22]
gi|420273504|ref|ZP_14775837.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA40]
gi|420278817|ref|ZP_14781084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW06591]
gi|420284946|ref|ZP_14787164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10246]
gi|420290574|ref|ZP_14792739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW11039]
gi|420296235|ref|ZP_14798332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09109]
gi|420302065|ref|ZP_14804097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10119]
gi|420307959|ref|ZP_14809933.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1738]
gi|420313259|ref|ZP_14815167.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1734]
gi|420318882|ref|ZP_14820739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2850-71]
gi|420324045|ref|ZP_14825831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri CCH060]
gi|420329610|ref|ZP_14831315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-1770]
gi|420340004|ref|ZP_14841531.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-404]
gi|420351207|ref|ZP_14852406.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 4444-74]
gi|420357064|ref|ZP_14858080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3226-85]
gi|420361958|ref|ZP_14862884.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 4822-66]
gi|420370211|ref|ZP_14870824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1235-66]
gi|420384076|ref|ZP_14883464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa12]
gi|420389778|ref|ZP_14889051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPEC C342-62]
gi|421681141|ref|ZP_16120971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1485-80]
gi|421777838|ref|ZP_16214428.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AD30]
gi|421810661|ref|ZP_16246472.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0416]
gi|421816754|ref|ZP_16252317.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0821]
gi|421822139|ref|ZP_16257577.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK920]
gi|421828872|ref|ZP_16264202.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA7]
gi|422330695|ref|ZP_16411712.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 4_1_47FAA]
gi|422355329|ref|ZP_16436045.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 117-3]
gi|422356282|ref|ZP_16436971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 110-3]
gi|422363027|ref|ZP_16443575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 153-1]
gi|422368705|ref|ZP_16449110.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 16-3]
gi|422378072|ref|ZP_16458295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 60-1]
gi|422378679|ref|ZP_16458886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 57-2]
gi|422748495|ref|ZP_16802408.1| ATP-dependent Clp protease [Escherichia coli H252]
gi|422753091|ref|ZP_16806918.1| ATP-dependent Clp protease [Escherichia coli H263]
gi|422763233|ref|ZP_16816988.1| ATP-dependent Clp protease [Escherichia coli E1167]
gi|422764969|ref|ZP_16818696.1| ATP-dependent Clp protease [Escherichia coli E1520]
gi|422769667|ref|ZP_16823358.1| ATP-dependent Clp protease [Escherichia coli E482]
gi|422777135|ref|ZP_16830788.1| ATP-dependent Clp protease [Escherichia coli H120]
gi|422782769|ref|ZP_16835554.1| ATP-dependent Clp protease [Escherichia coli TW10509]
gi|422785048|ref|ZP_16837787.1| ATP-dependent Clp protease [Escherichia coli H489]
gi|422791246|ref|ZP_16843949.1| ATP-dependent Clp protease [Escherichia coli TA007]
gi|422802319|ref|ZP_16850813.1| ATP-dependent Clp protease [Escherichia coli M863]
gi|422816452|ref|ZP_16864667.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli M919]
gi|422830601|ref|ZP_16878757.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B093]
gi|422835146|ref|ZP_16883203.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli E101]
gi|422838960|ref|ZP_16886932.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H397]
gi|422960325|ref|ZP_16971773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H494]
gi|422974759|ref|ZP_16976460.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli TA124]
gi|422991154|ref|ZP_16981925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C227-11]
gi|422993093|ref|ZP_16983857.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C236-11]
gi|422998304|ref|ZP_16989060.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 09-7901]
gi|423006765|ref|ZP_16997508.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 04-8351]
gi|423008408|ref|ZP_16999146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-3677]
gi|423022595|ref|ZP_17013298.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4404]
gi|423027749|ref|ZP_17018442.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4522]
gi|423033586|ref|ZP_17024270.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4623]
gi|423036452|ref|ZP_17027126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|423041572|ref|ZP_17032239.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|423048258|ref|ZP_17038915.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|423051842|ref|ZP_17040650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|423058807|ref|ZP_17047603.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|423652933|ref|ZP_17628236.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA31]
gi|423701219|ref|ZP_17675678.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H730]
gi|423710209|ref|ZP_17684559.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B799]
gi|424075300|ref|ZP_17812664.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA505]
gi|424081628|ref|ZP_17818504.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA517]
gi|424088249|ref|ZP_17824524.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1996]
gi|424094468|ref|ZP_17830243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1985]
gi|424100870|ref|ZP_17836049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1990]
gi|424107683|ref|ZP_17842277.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93-001]
gi|424113672|ref|ZP_17847840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA3]
gi|424119734|ref|ZP_17853464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA5]
gi|424125994|ref|ZP_17859212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA9]
gi|424132077|ref|ZP_17864896.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA10]
gi|424138623|ref|ZP_17870935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA14]
gi|424145063|ref|ZP_17876850.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA15]
gi|424151209|ref|ZP_17882480.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA24]
gi|424184947|ref|ZP_17887913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA25]
gi|424266452|ref|ZP_17893815.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA28]
gi|424421801|ref|ZP_17899544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA32]
gi|424453617|ref|ZP_17905172.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA33]
gi|424459915|ref|ZP_17910873.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA39]
gi|424466384|ref|ZP_17916592.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA41]
gi|424472945|ref|ZP_17922638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA42]
gi|424478893|ref|ZP_17928156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07945]
gi|424484963|ref|ZP_17933847.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09098]
gi|424491085|ref|ZP_17939499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09195]
gi|424498174|ref|ZP_17945464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4203]
gi|424504403|ref|ZP_17951199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4196]
gi|424510661|ref|ZP_17956915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14313]
gi|424518229|ref|ZP_17962675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14301]
gi|424524058|ref|ZP_17968099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4421]
gi|424530266|ref|ZP_17973912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4422]
gi|424536240|ref|ZP_17979519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4013]
gi|424542148|ref|ZP_17984985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4402]
gi|424548472|ref|ZP_17990696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4439]
gi|424554736|ref|ZP_17996474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4436]
gi|424561083|ref|ZP_18002384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4437]
gi|424567111|ref|ZP_18008043.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4448]
gi|424573299|ref|ZP_18013738.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1845]
gi|424579254|ref|ZP_18019203.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1863]
gi|424747926|ref|ZP_18176078.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CFSAN001629]
gi|424766681|ref|ZP_18194026.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H11 str. CFSAN001630]
gi|424768159|ref|ZP_18195451.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H8 str. CFSAN001632]
gi|424836930|ref|ZP_18261567.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5a str. M90T]
gi|425095925|ref|ZP_18498966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4870]
gi|425102064|ref|ZP_18504729.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.2239]
gi|425107865|ref|ZP_18510133.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 6.0172]
gi|425113767|ref|ZP_18515605.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0566]
gi|425118533|ref|ZP_18520268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0569]
gi|425123687|ref|ZP_18525281.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0586]
gi|425129727|ref|ZP_18530843.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.2524]
gi|425136067|ref|ZP_18536806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0833]
gi|425141967|ref|ZP_18542274.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0869]
gi|425148285|ref|ZP_18548196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.0221]
gi|425153903|ref|ZP_18553466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA34]
gi|425160352|ref|ZP_18559541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA506]
gi|425165862|ref|ZP_18564686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA507]
gi|425172155|ref|ZP_18570569.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA504]
gi|425178035|ref|ZP_18576104.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1999]
gi|425184184|ref|ZP_18581823.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1997]
gi|425190935|ref|ZP_18588076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE1487]
gi|425197264|ref|ZP_18593929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE037]
gi|425203925|ref|ZP_18600069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK2001]
gi|425209680|ref|ZP_18605431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA4]
gi|425215720|ref|ZP_18611053.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA23]
gi|425222290|ref|ZP_18617164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA49]
gi|425228535|ref|ZP_18622946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA45]
gi|425234835|ref|ZP_18628809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TT12B]
gi|425240840|ref|ZP_18634490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MA6]
gi|425246964|ref|ZP_18640188.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5905]
gi|425252695|ref|ZP_18645587.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli CB7326]
gi|425259006|ref|ZP_18651384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC96038]
gi|425265104|ref|ZP_18657042.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5412]
gi|425271134|ref|ZP_18662648.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW15901]
gi|425276313|ref|ZP_18667657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ARS4.2123]
gi|425281806|ref|ZP_18672927.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW00353]
gi|425286996|ref|ZP_18677931.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3006]
gi|425292564|ref|ZP_18683163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA38]
gi|425298637|ref|ZP_18688687.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 07798]
gi|425303945|ref|ZP_18693734.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli N1]
gi|425309307|ref|ZP_18698787.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1735]
gi|425315220|ref|ZP_18704310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1736]
gi|425321273|ref|ZP_18709960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1737]
gi|425327465|ref|ZP_18715701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1846]
gi|425333650|ref|ZP_18721383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1847]
gi|425340071|ref|ZP_18727326.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1848]
gi|425345949|ref|ZP_18732765.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1849]
gi|425352162|ref|ZP_18738556.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1850]
gi|425358152|ref|ZP_18744138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1856]
gi|425364262|ref|ZP_18749825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1862]
gi|425370707|ref|ZP_18755683.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1864]
gi|425377259|ref|ZP_18761661.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1865]
gi|425383501|ref|ZP_18767392.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1866]
gi|425390201|ref|ZP_18773671.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1868]
gi|425396319|ref|ZP_18779377.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1869]
gi|425402304|ref|ZP_18784920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1870]
gi|425408845|ref|ZP_18791012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE098]
gi|425415115|ref|ZP_18796765.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK523]
gi|425421051|ref|ZP_18802282.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1288]
gi|425426271|ref|ZP_18807332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1304]
gi|427803505|ref|ZP_18970572.1| ATP-dependent specificity component of clpP serine protease
[Escherichia coli chi7122]
gi|427808123|ref|ZP_18975188.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli]
gi|428944920|ref|ZP_19017579.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1467]
gi|428951074|ref|ZP_19023220.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1042]
gi|428956930|ref|ZP_19028640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 89.0511]
gi|428963262|ref|ZP_19034458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0091]
gi|428969325|ref|ZP_19039967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0039]
gi|428975895|ref|ZP_19046076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.2281]
gi|428981616|ref|ZP_19051362.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0055]
gi|428987880|ref|ZP_19057180.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0056]
gi|428993692|ref|ZP_19062607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 94.0618]
gi|428999791|ref|ZP_19068309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0183]
gi|429006033|ref|ZP_19073957.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.1288]
gi|429012378|ref|ZP_19079639.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0943]
gi|429018516|ref|ZP_19085309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0428]
gi|429024268|ref|ZP_19090688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0427]
gi|429030582|ref|ZP_19096468.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0939]
gi|429036768|ref|ZP_19102217.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0932]
gi|429042686|ref|ZP_19107700.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0107]
gi|429048496|ref|ZP_19113156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0003]
gi|429053859|ref|ZP_19118355.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.1742]
gi|429059552|ref|ZP_19123704.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0007]
gi|429064997|ref|ZP_19128866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0672]
gi|429071564|ref|ZP_19134921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0678]
gi|429076829|ref|ZP_19140049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0713]
gi|429722634|ref|ZP_19257532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429774731|ref|ZP_19306734.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02030]
gi|429779994|ref|ZP_19311947.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429784046|ref|ZP_19315959.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02092]
gi|429789384|ref|ZP_19321259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02093]
gi|429795614|ref|ZP_19327440.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02281]
gi|429801540|ref|ZP_19333318.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02318]
gi|429805172|ref|ZP_19336919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02913]
gi|429809983|ref|ZP_19341685.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03439]
gi|429815743|ref|ZP_19347402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-04080]
gi|429821331|ref|ZP_19352944.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03943]
gi|429824045|ref|ZP_19355562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0109]
gi|429830413|ref|ZP_19361280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0010]
gi|429907005|ref|ZP_19372974.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429911203|ref|ZP_19377159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9941]
gi|429917039|ref|ZP_19382979.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429922077|ref|ZP_19387998.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429927895|ref|ZP_19393801.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429931827|ref|ZP_19397722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429933429|ref|ZP_19399319.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429939083|ref|ZP_19404957.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429946726|ref|ZP_19412581.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429949358|ref|ZP_19415206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429957642|ref|ZP_19423471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0466]
gi|432352101|ref|ZP_19595410.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE2]
gi|432356782|ref|ZP_19600029.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE4]
gi|432361189|ref|ZP_19604386.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE5]
gi|432368417|ref|ZP_19611522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE10]
gi|432375521|ref|ZP_19618535.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE12]
gi|432380066|ref|ZP_19623030.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE15]
gi|432385895|ref|ZP_19628794.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE16]
gi|432390366|ref|ZP_19633230.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE21]
gi|432396312|ref|ZP_19639104.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE25]
gi|432400550|ref|ZP_19643310.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE26]
gi|432405308|ref|ZP_19648031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE28]
gi|432410507|ref|ZP_19653190.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE39]
gi|432429587|ref|ZP_19672047.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE181]
gi|432430554|ref|ZP_19672999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE187]
gi|432435083|ref|ZP_19677484.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE188]
gi|432439751|ref|ZP_19682114.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE189]
gi|432444875|ref|ZP_19687184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE191]
gi|432453234|ref|ZP_19695474.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE193]
gi|432455366|ref|ZP_19697568.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE201]
gi|432459409|ref|ZP_19701573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE204]
gi|432464450|ref|ZP_19706558.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE205]
gi|432469871|ref|ZP_19711924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE206]
gi|432474458|ref|ZP_19716471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE208]
gi|432479799|ref|ZP_19721764.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE210]
gi|432484166|ref|ZP_19726090.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE212]
gi|432492734|ref|ZP_19734573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE213]
gi|432494307|ref|ZP_19736125.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE214]
gi|432503146|ref|ZP_19744883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE220]
gi|432512646|ref|ZP_19749889.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE224]
gi|432521075|ref|ZP_19758240.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE228]
gi|432522591|ref|ZP_19759730.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE230]
gi|432529806|ref|ZP_19766850.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE233]
gi|432532627|ref|ZP_19769627.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE234]
gi|432541292|ref|ZP_19778167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE235]
gi|432541814|ref|ZP_19778675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE236]
gi|432547158|ref|ZP_19783955.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE237]
gi|432552446|ref|ZP_19789178.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE47]
gi|432562348|ref|ZP_19798975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE51]
gi|432567277|ref|ZP_19803804.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE53]
gi|432572433|ref|ZP_19808924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE55]
gi|432579115|ref|ZP_19815549.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE56]
gi|432582549|ref|ZP_19818959.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE57]
gi|432586737|ref|ZP_19823109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE58]
gi|432591557|ref|ZP_19827886.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE60]
gi|432596323|ref|ZP_19832612.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE62]
gi|432600955|ref|ZP_19837210.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE66]
gi|432606323|ref|ZP_19842519.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE67]
gi|432610172|ref|ZP_19846345.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE72]
gi|432615212|ref|ZP_19851347.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE75]
gi|432620541|ref|ZP_19856587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE76]
gi|432626022|ref|ZP_19862007.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE77]
gi|432630008|ref|ZP_19865958.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE80]
gi|432635752|ref|ZP_19871638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE81]
gi|432639557|ref|ZP_19875402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE83]
gi|432644873|ref|ZP_19880676.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE86]
gi|432649966|ref|ZP_19885728.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE87]
gi|432654448|ref|ZP_19890167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE93]
gi|432659680|ref|ZP_19895341.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE111]
gi|432664626|ref|ZP_19900222.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE116]
gi|432669370|ref|ZP_19904919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE119]
gi|432678033|ref|ZP_19913459.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE142]
gi|432678860|ref|ZP_19914263.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE143]
gi|432684271|ref|ZP_19919590.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE156]
gi|432690328|ref|ZP_19925574.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE161]
gi|432697755|ref|ZP_19932927.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE169]
gi|432712159|ref|ZP_19947211.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE8]
gi|432717450|ref|ZP_19952452.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE9]
gi|432722001|ref|ZP_19956928.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE17]
gi|432726547|ref|ZP_19961430.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE18]
gi|432731163|ref|ZP_19966002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE45]
gi|432735964|ref|ZP_19970740.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE42]
gi|432740234|ref|ZP_19974956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE23]
gi|432744375|ref|ZP_19979080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE43]
gi|432748894|ref|ZP_19983517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE29]
gi|432753235|ref|ZP_19987803.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE22]
gi|432758223|ref|ZP_19992746.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE46]
gi|432763729|ref|ZP_19998181.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE48]
gi|432769239|ref|ZP_20003612.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE50]
gi|432773618|ref|ZP_20007908.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE54]
gi|432777290|ref|ZP_20011544.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE59]
gi|432782346|ref|ZP_20016532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE63]
gi|432786086|ref|ZP_20020254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE65]
gi|432791687|ref|ZP_20025781.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE78]
gi|432797654|ref|ZP_20031682.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE79]
gi|432800721|ref|ZP_20034711.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE84]
gi|432804519|ref|ZP_20038465.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE91]
gi|432812550|ref|ZP_20046399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE101]
gi|432813934|ref|ZP_20047745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE115]
gi|432819757|ref|ZP_20053471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE118]
gi|432825886|ref|ZP_20059543.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE123]
gi|432830426|ref|ZP_20064035.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE135]
gi|432833494|ref|ZP_20067042.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE136]
gi|432837987|ref|ZP_20071480.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE140]
gi|432842725|ref|ZP_20076146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE141]
gi|432848216|ref|ZP_20080088.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE144]
gi|432859094|ref|ZP_20085268.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE146]
gi|432873100|ref|ZP_20092798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE147]
gi|432879930|ref|ZP_20096750.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE154]
gi|432884404|ref|ZP_20099360.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE158]
gi|432893054|ref|ZP_20105159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE165]
gi|432897225|ref|ZP_20108221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE192]
gi|432902771|ref|ZP_20112451.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE194]
gi|432910124|ref|ZP_20117251.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE190]
gi|432932775|ref|ZP_20132629.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE184]
gi|432942311|ref|ZP_20139653.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE183]
gi|432945104|ref|ZP_20141399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE196]
gi|432953571|ref|ZP_20145870.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE197]
gi|432959822|ref|ZP_20150108.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE202]
gi|432966549|ref|ZP_20155469.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE203]
gi|432970615|ref|ZP_20159493.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE207]
gi|432977160|ref|ZP_20165985.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE209]
gi|432984130|ref|ZP_20172869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE215]
gi|432989543|ref|ZP_20178213.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE217]
gi|432994233|ref|ZP_20182850.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE218]
gi|432998652|ref|ZP_20187192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE223]
gi|433003964|ref|ZP_20192402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE227]
gi|433011172|ref|ZP_20199577.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE229]
gi|433012612|ref|ZP_20200995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE104]
gi|433017394|ref|ZP_20205665.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE105]
gi|433022185|ref|ZP_20210211.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE106]
gi|433027480|ref|ZP_20215356.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE109]
gi|433031874|ref|ZP_20219689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE112]
gi|433037374|ref|ZP_20224995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE113]
gi|433041918|ref|ZP_20229453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE117]
gi|433046509|ref|ZP_20233941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE120]
gi|433051737|ref|ZP_20238975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE122]
gi|433056776|ref|ZP_20243863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE124]
gi|433061655|ref|ZP_20248621.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE125]
gi|433066646|ref|ZP_20253490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE128]
gi|433071487|ref|ZP_20258189.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE129]
gi|433076636|ref|ZP_20263202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE131]
gi|433081385|ref|ZP_20267860.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE133]
gi|433086042|ref|ZP_20272446.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE137]
gi|433090762|ref|ZP_20277070.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE138]
gi|433099986|ref|ZP_20286098.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE145]
gi|433109690|ref|ZP_20295570.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE150]
gi|433114389|ref|ZP_20300205.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE153]
gi|433118987|ref|ZP_20304701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE157]
gi|433124006|ref|ZP_20309597.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE160]
gi|433128766|ref|ZP_20314246.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE163]
gi|433133586|ref|ZP_20318969.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE166]
gi|433138067|ref|ZP_20323354.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE167]
gi|433143000|ref|ZP_20328179.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE168]
gi|433147895|ref|ZP_20332961.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE174]
gi|433152582|ref|ZP_20337552.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE176]
gi|433157381|ref|ZP_20342257.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE177]
gi|433162252|ref|ZP_20347017.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE179]
gi|433167227|ref|ZP_20351903.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE180]
gi|433172308|ref|ZP_20356868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE232]
gi|433176884|ref|ZP_20361351.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE82]
gi|433181971|ref|ZP_20366274.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE85]
gi|433187243|ref|ZP_20371372.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE88]
gi|433192368|ref|ZP_20376390.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE90]
gi|433197025|ref|ZP_20380954.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE94]
gi|433201859|ref|ZP_20385671.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE95]
gi|433206588|ref|ZP_20390289.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE97]
gi|433211368|ref|ZP_20394983.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE99]
gi|433324496|ref|ZP_20401783.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J96]
gi|442590117|ref|ZP_21008901.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|442596445|ref|ZP_21014256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|442606707|ref|ZP_21021502.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli Nissle 1917]
gi|443616466|ref|YP_007380322.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O78]
gi|444922756|ref|ZP_21242479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 09BKT078844]
gi|444929078|ref|ZP_21248232.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0814]
gi|444934428|ref|ZP_21253372.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0815]
gi|444940007|ref|ZP_21258656.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0816]
gi|444945609|ref|ZP_21264031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0839]
gi|444951154|ref|ZP_21269380.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0848]
gi|444956608|ref|ZP_21274610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1753]
gi|444961971|ref|ZP_21279725.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1775]
gi|444967643|ref|ZP_21285120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1793]
gi|444973145|ref|ZP_21290428.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1805]
gi|444978685|ref|ZP_21295683.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 700728]
gi|444983979|ref|ZP_21300849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA11]
gi|444989222|ref|ZP_21305964.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA19]
gi|444994576|ref|ZP_21311173.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA13]
gi|445000072|ref|ZP_21316536.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA2]
gi|445005528|ref|ZP_21321869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA47]
gi|445010701|ref|ZP_21326895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA48]
gi|445016483|ref|ZP_21332534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA8]
gi|445021930|ref|ZP_21337853.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 7.1982]
gi|445027172|ref|ZP_21342952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1781]
gi|445032667|ref|ZP_21348293.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1762]
gi|445038360|ref|ZP_21353831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA35]
gi|445043575|ref|ZP_21358915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4880]
gi|445049147|ref|ZP_21364318.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0083]
gi|445054797|ref|ZP_21369750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0670]
gi|450185744|ref|ZP_21889214.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli SEPT362]
gi|450211062|ref|ZP_21894201.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O08]
gi|450239655|ref|ZP_21899082.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli S17]
gi|452969099|ref|ZP_21967326.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EC4009]
gi|62288037|sp|P0A6H1.2|CLPX_ECOLI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288038|sp|P0A6H2.2|CLPX_ECOL6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288039|sp|P0A6H3.2|CLPX_ECO57 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288040|sp|P0A6H4.2|CLPX_SHIFL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122424751|sp|Q1RF97.1|CLPX_ECOUT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122957619|sp|Q0T7E5.1|CLPX_SHIF8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123049431|sp|Q0TKK3.1|CLPX_ECOL5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123563420|sp|Q32JJ4.1|CLPX_SHIDS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123617887|sp|Q3Z4W5.1|CLPX_SHISS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214775|sp|A1A8A7.1|CLPX_ECOK1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009013|sp|A7ZIJ6.1|CLPX_ECO24 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009014|sp|A7ZX96.1|CLPX_ECOHS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044134|sp|B1J010.1|CLPX_ECOLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706586|sp|B7MD97.1|CLPX_ECO45 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706587|sp|B7NJ56.1|CLPX_ECO7I RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706588|sp|B7M3T1.1|CLPX_ECO8A RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706589|sp|B7N8Z2.1|CLPX_ECOLU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706590|sp|B1LJJ5.1|CLPX_ECOSM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229889854|sp|B1XFM6.1|CLPX_ECODH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066655|sp|B5Z3U5.1|CLPX_ECO5E RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066656|sp|B6HZP5.1|CLPX_ECOSE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238689516|sp|B2U4P3.1|CLPX_SHIB3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763846|sp|B7UJR1.1|CLPX_ECO27 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763847|sp|B7L675.1|CLPX_ECO55 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763848|sp|B7MQF4.1|CLPX_ECO81 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|259491256|sp|C4ZTJ5.1|CLPX_ECOBW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|12513300|gb|AAG54788.1|AE005223_3 ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli O157:H7 str. EDL933]
gi|26106847|gb|AAN79032.1|AE016756_215 ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli CFT073]
gi|347729|gb|AAA16116.1| ATP-dependent protease ATPase subunit [Escherichia coli]
gi|1773122|gb|AAB40194.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786642|gb|AAC73541.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MG1655]
gi|13359949|dbj|BAB33915.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli O157:H7 str. Sakai]
gi|24050613|gb|AAN42039.1| ATP-dependent specificity component of clpP serine protease
[Shigella flexneri 2a str. 301]
gi|30040184|gb|AAP15917.1| ATP-dependent specificity component of clpP serine protease
[Shigella flexneri 2a str. 2457T]
gi|73854490|gb|AAZ87197.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Shigella sonnei Ss046]
gi|81239803|gb|ABB60513.1| ATP-dependent specificity component of clpP serine protease
[Shigella dysenteriae Sd197]
gi|85674578|dbj|BAE76218.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K12 substr. W3110]
gi|91071086|gb|ABE05967.1| ATP-dependent specificity component of ClpP serine protease,
chaperone [Escherichia coli UTI89]
gi|110342291|gb|ABG68528.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 536]
gi|110614014|gb|ABF02681.1| ATP-dependent protease ATP-binding subunit protease [Shigella
flexneri 5 str. 8401]
gi|115511822|gb|ABI99896.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli APEC O1]
gi|157065645|gb|ABV04900.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli HS]
gi|157079685|gb|ABV19393.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E24377A]
gi|169756117|gb|ACA78816.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 8739]
gi|169887859|gb|ACB01566.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. DH10B]
gi|170520500|gb|ACB18678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli SMS-3-5]
gi|187427785|gb|ACD07059.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii CDC 3083-94]
gi|188488172|gb|EDU63275.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 53638]
gi|189002703|gb|EDU71689.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4076]
gi|189357986|gb|EDU76405.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4401]
gi|189362383|gb|EDU80802.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4486]
gi|189373571|gb|EDU91987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC869]
gi|192929193|gb|EDV82803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E22]
gi|208727204|gb|EDZ76805.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4206]
gi|208731523|gb|EDZ80211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4045]
gi|208737100|gb|EDZ84784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4042]
gi|209160302|gb|ACI37735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4115]
gi|209743844|gb|ACI70229.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743846|gb|ACI70230.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743848|gb|ACI70231.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743850|gb|ACI70232.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743852|gb|ACI70233.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209910914|dbj|BAG75988.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
SE11]
gi|215263591|emb|CAS07921.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O127:H6 str. E2348/69]
gi|217322070|gb|EEC30494.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. TW14588]
gi|218350633|emb|CAU96325.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli 55989]
gi|218359773|emb|CAQ97314.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli IAI1]
gi|218364117|emb|CAR01782.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli S88]
gi|218368636|emb|CAR16375.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli IAI39]
gi|218425866|emb|CAR06672.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli ED1a]
gi|218430819|emb|CAR11693.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli UMN026]
gi|222032233|emb|CAP74972.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli LF82]
gi|226898777|gb|EEH85036.1| ATP-dependent protease ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|227838637|gb|EEJ49103.1| ATP-dependent protease ATP-binding subunit [Escherichia coli 83972]
gi|238860036|gb|ACR62034.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli BW2952]
gi|242376219|emb|CAQ30910.1| clpX, subunit of ClpX ATP-dependent protease specificity component
and chaperone, ClpXP and ClpAXP [Escherichia coli
BL21(DE3)]
gi|253325617|gb|ACT30219.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972408|gb|ACT38079.1| ATP-dependent protease ATP-binding subunit [Escherichia coli B str.
REL606]
gi|253976618|gb|ACT42288.1| ATP-dependent protease ATP-binding subunit [Escherichia coli
BL21(DE3)]
gi|254591022|gb|ACT70383.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. TW14359]
gi|257752310|dbj|BAI23812.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O26:H11 str. 11368]
gi|257757786|dbj|BAI29283.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O103:H2 str. 12009]
gi|257762955|dbj|BAI34450.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O111:H- str. 11128]
gi|260450375|gb|ACX40797.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|281599778|gb|ADA72762.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shigella
flexneri 2002017]
gi|284920248|emb|CBG33307.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
042]
gi|290761218|gb|ADD55179.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli O55:H7 str. CB9615]
gi|291325037|gb|EFE64452.1| ATP-dependent Clp protease [Escherichia coli B088]
gi|291429412|gb|EFF02432.1| ClpX [Escherichia coli FVEC1412]
gi|291433751|gb|EFF06724.1| ATP-dependent Clp protease [Escherichia coli B185]
gi|291464929|gb|ADE05991.1| ATP-dependent protease ClpX [Escherichia coli]
gi|291471766|gb|EFF14249.1| ATP-dependent Clp protease [Escherichia coli B354]
gi|294493190|gb|ADE91946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli IHE3034]
gi|298280284|gb|EFI21788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli FVEC1302]
gi|299880020|gb|EFI88231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 196-1]
gi|300304192|gb|EFJ58712.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 200-1]
gi|300315273|gb|EFJ65057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 175-1]
gi|300355990|gb|EFJ71860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 198-1]
gi|300397449|gb|EFJ80987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 69-1]
gi|300404589|gb|EFJ88127.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 84-1]
gi|300407559|gb|EFJ91097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 45-1]
gi|300414630|gb|EFJ97940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 115-1]
gi|300419618|gb|EFK02929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 182-1]
gi|300452509|gb|EFK16129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 116-1]
gi|300457886|gb|EFK21379.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 21-1]
gi|300527101|gb|EFK48170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 119-7]
gi|300529121|gb|EFK50183.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 107-1]
gi|300843086|gb|EFK70846.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 124-1]
gi|301074509|gb|EFK89315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 146-1]
gi|305853857|gb|EFM54296.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
NC101]
gi|306907686|gb|EFN38188.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli W]
gi|307552345|gb|ADN45120.1| ATP-dependent specificity component of ClpP serine protease
[Escherichia coli ABU 83972]
gi|307628092|gb|ADN72396.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UM146]
gi|308121482|gb|EFO58744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 145-7]
gi|308924608|gb|EFP70103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 1617]
gi|309700699|emb|CBI99995.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
ETEC H10407]
gi|310337183|gb|EFQ02321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1827-70]
gi|312290771|gb|EFR18648.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2362-75]
gi|312945016|gb|ADR25843.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O83:H1 str. NRG 857C]
gi|313646935|gb|EFS11392.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2a str. 2457T]
gi|315059718|gb|ADT74045.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli W]
gi|315135120|dbj|BAJ42279.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|315256266|gb|EFU36234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 85-1]
gi|315289844|gb|EFU49234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 110-3]
gi|315294228|gb|EFU53579.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 153-1]
gi|315299562|gb|EFU58810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 16-3]
gi|315616621|gb|EFU97238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3431]
gi|320186068|gb|EFW60813.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
flexneri CDC 796-83]
gi|320192854|gb|EFW67494.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC1212]
gi|320197088|gb|EFW71707.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli WV_060327]
gi|320201682|gb|EFW76258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli EC4100B]
gi|320638433|gb|EFX08147.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. G5101]
gi|320643814|gb|EFX12937.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. 493-89]
gi|320649165|gb|EFX17743.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. H 2687]
gi|320656058|gb|EFX23974.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661208|gb|EFX28639.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665184|gb|EFX32277.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. LSU-61]
gi|323153475|gb|EFZ39729.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa14]
gi|323160451|gb|EFZ46399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E128010]
gi|323164239|gb|EFZ50046.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 53G]
gi|323170524|gb|EFZ56174.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli LT-68]
gi|323178293|gb|EFZ63871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1180]
gi|323184731|gb|EFZ70102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1357]
gi|323191358|gb|EFZ76621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli RN587/1]
gi|323379717|gb|ADX51985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli KO11FL]
gi|323938624|gb|EGB34873.1| ATP-dependent Clp protease [Escherichia coli E1520]
gi|323943245|gb|EGB39401.1| ATP-dependent Clp protease [Escherichia coli E482]
gi|323945343|gb|EGB41399.1| ATP-dependent Clp protease [Escherichia coli H120]
gi|323952950|gb|EGB48818.1| ATP-dependent Clp protease [Escherichia coli H252]
gi|323958631|gb|EGB54334.1| ATP-dependent Clp protease [Escherichia coli H263]
gi|323963428|gb|EGB58990.1| ATP-dependent Clp protease [Escherichia coli H489]
gi|323965125|gb|EGB60584.1| ATP-dependent Clp protease [Escherichia coli M863]
gi|323972292|gb|EGB67502.1| ATP-dependent Clp protease [Escherichia coli TA007]
gi|323976077|gb|EGB71170.1| ATP-dependent Clp protease [Escherichia coli TW10509]
gi|324010069|gb|EGB79288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 57-2]
gi|324010652|gb|EGB79871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 60-1]
gi|324016701|gb|EGB85920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 117-3]
gi|324116926|gb|EGC10839.1| ATP-dependent Clp protease [Escherichia coli E1167]
gi|326341202|gb|EGD64994.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1044]
gi|326346023|gb|EGD69762.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1125]
gi|327254766|gb|EGE66382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_7v]
gi|330910232|gb|EGH38742.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli AA86]
gi|331037756|gb|EGI09976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H736]
gi|331045776|gb|EGI17902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M605]
gi|331051117|gb|EGI23169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M718]
gi|331054743|gb|EGI26752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA206]
gi|331060241|gb|EGI32205.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA143]
gi|331066017|gb|EGI37901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA271]
gi|331070974|gb|EGI42333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA280]
gi|331076168|gb|EGI47450.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H591]
gi|331081035|gb|EGI52200.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H299]
gi|332094594|gb|EGI99640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 5216-82]
gi|332098459|gb|EGJ03425.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 3594-74]
gi|332103941|gb|EGJ07287.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Shigella sp. D9]
gi|332341802|gb|AEE55136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNK88]
gi|332760729|gb|EGJ91017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 4343-70]
gi|332761521|gb|EGJ91803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2747-71]
gi|332763736|gb|EGJ93974.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-671]
gi|332768359|gb|EGJ98543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2930-71]
gi|333007845|gb|EGK27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-218]
gi|333008124|gb|EGK27599.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri VA-6]
gi|333010899|gb|EGK30325.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-272]
gi|333020700|gb|EGK39960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-227]
gi|333021843|gb|EGK41091.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-304]
gi|335577005|gb|EGM63238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri J1713]
gi|338771516|gb|EGP26256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli PCN033]
gi|339413387|gb|AEJ55059.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNF18]
gi|340741503|gb|EGR75649.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. LB226692]
gi|341921033|gb|EGT70637.1| clpX [Escherichia coli O104:H4 str. C227-11]
gi|342362474|gb|EGU26592.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH140A]
gi|342930643|gb|EGU99365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 79-10]
gi|344193755|gb|EGV47833.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH001]
gi|345341458|gb|EGW73863.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_C165-02]
gi|345344082|gb|EGW76458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_B2F1]
gi|345345294|gb|EGW77640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2534-86]
gi|345354065|gb|EGW86292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_94C]
gi|345361731|gb|EGW93889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3030-1]
gi|345365644|gb|EGW97751.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_DG131-3]
gi|345365956|gb|EGW98054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_EH250]
gi|345377685|gb|EGX09616.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_MHI813]
gi|345381199|gb|EGX13084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli G58-1]
gi|345386282|gb|EGX16117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_H.1.8]
gi|345391233|gb|EGX21027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_S1191]
gi|345395482|gb|EGX25226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TX1999]
gi|349736548|gb|AEQ11254.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O7:K1 str. CE10]
gi|354858264|gb|EHF18715.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 04-8351]
gi|354860140|gb|EHF20587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C227-11]
gi|354866836|gb|EHF27259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C236-11]
gi|354877172|gb|EHF37532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 09-7901]
gi|354879479|gb|EHF39817.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4404]
gi|354884066|gb|EHF44380.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-3677]
gi|354885867|gb|EHF46159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4522]
gi|354888934|gb|EHF49188.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4623]
gi|354901535|gb|EHF61662.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|354905766|gb|EHF65849.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|354908273|gb|EHF68329.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|354918745|gb|EHF78701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|354922433|gb|EHF82348.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|355418926|gb|AER83123.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i2']
gi|355423846|gb|AER88042.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i14']
gi|359331198|dbj|BAL37645.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MDS42]
gi|371594123|gb|EHN82995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H494]
gi|371595519|gb|EHN84368.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli TA124]
gi|371604297|gb|EHN92926.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B093]
gi|371611431|gb|EHN99953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H397]
gi|371612951|gb|EHO01454.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli E101]
gi|373248399|gb|EHP67829.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 4_1_47FAA]
gi|374357450|gb|AEZ39157.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. RM12579]
gi|375323617|gb|EHS69322.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H43 str. T22]
gi|377848891|gb|EHU13867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1A]
gi|377850930|gb|EHU15885.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1C]
gi|377854085|gb|EHU18975.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1B]
gi|377862761|gb|EHU27568.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1D]
gi|377866874|gb|EHU31638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1E]
gi|377868229|gb|EHU32973.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2A]
gi|377879180|gb|EHU43753.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2B]
gi|377883933|gb|EHU48451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2D]
gi|377885904|gb|EHU50395.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2C]
gi|377898426|gb|EHU62786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2E]
gi|377900620|gb|EHU64952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3A]
gi|377902536|gb|EHU66840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3B]
gi|377914361|gb|EHU78484.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3C]
gi|377918754|gb|EHU82801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3D]
gi|377920841|gb|EHU84856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3E]
gi|377932287|gb|EHU96141.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3F]
gi|377934477|gb|EHU98308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4A]
gi|377940608|gb|EHV04357.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4B]
gi|377950680|gb|EHV14307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4C]
gi|377951519|gb|EHV15138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4D]
gi|377955448|gb|EHV19004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4E]
gi|377966084|gb|EHV29497.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5A]
gi|377967397|gb|EHV30803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4F]
gi|377973510|gb|EHV36850.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5B]
gi|377981473|gb|EHV44732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5D]
gi|377981809|gb|EHV45067.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5C]
gi|377988580|gb|EHV51758.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5E]
gi|378000302|gb|EHV63376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6A]
gi|378001422|gb|EHV64481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6B]
gi|378003855|gb|EHV66895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6C]
gi|378014253|gb|EHV77159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6D]
gi|378017177|gb|EHV80052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6E]
gi|378018840|gb|EHV81686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7A]
gi|378027888|gb|EHV90513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7C]
gi|378032403|gb|EHV94984.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7D]
gi|378037730|gb|EHW00253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7B]
gi|378042336|gb|EHW04785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7E]
gi|378052756|gb|EHW15058.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8A]
gi|378057135|gb|EHW19370.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8B]
gi|378063095|gb|EHW25265.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8C]
gi|378069190|gb|EHW31285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8D]
gi|378072757|gb|EHW34814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8E]
gi|378081869|gb|EHW43817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9A]
gi|378082780|gb|EHW44723.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9B]
gi|378090508|gb|EHW52345.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9C]
gi|378095203|gb|EHW56993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9D]
gi|378102387|gb|EHW64064.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9E]
gi|378107901|gb|EHW69519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10A]
gi|378116923|gb|EHW78441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10B]
gi|378119184|gb|EHW80679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10C]
gi|378121707|gb|EHW83158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10D]
gi|378134749|gb|EHW96070.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10E]
gi|378136537|gb|EHW97831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11A]
gi|378139985|gb|EHX01215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10F]
gi|378147353|gb|EHX08501.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11B]
gi|378153095|gb|EHX14181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11D]
gi|378157258|gb|EHX18300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11C]
gi|378161714|gb|EHX22690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11E]
gi|378175103|gb|EHX35922.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12A]
gi|378175609|gb|EHX36425.1| ATP-dependent protease Clp, ATPase subunit [Escherichia coli
DEC12B]
gi|378177103|gb|EHX37904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12C]
gi|378190585|gb|EHX51169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13A]
gi|378191145|gb|EHX51721.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12E]
gi|378191958|gb|EHX52532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12D]
gi|378204181|gb|EHX64597.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13B]
gi|378208330|gb|EHX68714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13D]
gi|378209339|gb|EHX69713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13C]
gi|378219747|gb|EHX80014.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13E]
gi|378221928|gb|EHX82170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14A]
gi|378226321|gb|EHX86508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14B]
gi|378234470|gb|EHX94548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14C]
gi|378237159|gb|EHX97186.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14D]
gi|378244657|gb|EHY04599.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15A]
gi|378251879|gb|EHY11775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15B]
gi|378252209|gb|EHY12103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15C]
gi|378257939|gb|EHY17775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15D]
gi|378261235|gb|EHY21030.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15E]
gi|380349369|gb|EIA37641.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SCI-07]
gi|383394282|gb|AFH19240.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KO11FL]
gi|383403933|gb|AFH10176.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W]
gi|383465982|gb|EID61003.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5a str. M90T]
gi|383474514|gb|EID66500.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W26]
gi|384377969|gb|EIE35861.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J53]
gi|384471621|gb|EIE55694.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AI27]
gi|385155300|gb|EIF17304.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O32:H37 str. P4]
gi|385539925|gb|EIF86752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli M919]
gi|385704857|gb|EIG41929.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B799]
gi|385712909|gb|EIG49848.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H730]
gi|386123462|gb|EIG72058.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 4_1_40B]
gi|386141486|gb|EIG82636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2741]
gi|386150551|gb|EIH01840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0588]
gi|386157207|gb|EIH13549.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0259]
gi|386164002|gb|EIH25788.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2264]
gi|386169473|gb|EIH35981.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0497]
gi|386170551|gb|EIH42604.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0741]
gi|386176095|gb|EIH53574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2608]
gi|386186396|gb|EIH69112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0624]
gi|386192019|gb|EIH80760.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0522]
gi|386193083|gb|EIH87382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli JB1-95]
gi|386199500|gb|EIH98491.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.154]
gi|386206015|gb|EII10521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0959]
gi|386209543|gb|EII20030.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 9.0111]
gi|386216840|gb|EII33329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0967]
gi|386225864|gb|EII48189.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.3916]
gi|386230076|gb|EII57431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.3884]
gi|386236866|gb|EII68838.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.4168]
gi|386242033|gb|EII78946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2303]
gi|386242865|gb|EII84600.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3003]
gi|386247647|gb|EII93820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07793]
gi|386252554|gb|EIJ02245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli B41]
gi|386257289|gb|EIJ12780.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 900105 (10e)]
gi|388341953|gb|EIL08030.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9534]
gi|388345222|gb|EIL11008.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H25 str. CVM9340]
gi|388346437|gb|EIL12154.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H2 str. CVM9450]
gi|388360310|gb|EIL24531.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9570]
gi|388361233|gb|EIL25367.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9545]
gi|388368619|gb|EIL32244.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9574]
gi|388377633|gb|EIL40428.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9942]
gi|388379314|gb|EIL41984.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10026]
gi|388383820|gb|EIL45568.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD1]
gi|388394240|gb|EIL55543.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-15]
gi|388395244|gb|EIL56468.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD2]
gi|388398325|gb|EIL59245.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
576-1]
gi|388400949|gb|EIL61634.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
75]
gi|388406307|gb|EIL66713.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-1]
gi|388415405|gb|EIL75335.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HM605]
gi|388420455|gb|EIL80147.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CUMT8]
gi|390650914|gb|EIN29287.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1996]
gi|390652872|gb|EIN31044.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA517]
gi|390653353|gb|EIN31500.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA505]
gi|390669797|gb|EIN46390.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93-001]
gi|390673008|gb|EIN49261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1990]
gi|390674060|gb|EIN50267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1985]
gi|390688661|gb|EIN63693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA3]
gi|390692171|gb|EIN66869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA9]
gi|390693117|gb|EIN67757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA5]
gi|390708496|gb|EIN81716.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA10]
gi|390710349|gb|EIN83371.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA15]
gi|390713048|gb|EIN85991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA14]
gi|390720357|gb|EIN93069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA22]
gi|390733890|gb|EIO05451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA25]
gi|390733931|gb|EIO05490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA24]
gi|390737015|gb|EIO08330.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA28]
gi|390752272|gb|EIO22118.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA31]
gi|390752753|gb|EIO22559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA32]
gi|390755180|gb|EIO24728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA33]
gi|390762422|gb|EIO31680.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA40]
gi|390776244|gb|EIO44195.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA41]
gi|390778642|gb|EIO46399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA42]
gi|390784193|gb|EIO51766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA39]
gi|390785791|gb|EIO53333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW06591]
gi|390795065|gb|EIO62350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10246]
gi|390801805|gb|EIO68856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW11039]
gi|390810317|gb|EIO77078.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07945]
gi|390812007|gb|EIO78692.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09109]
gi|390819406|gb|EIO85739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10119]
gi|390823112|gb|EIO89184.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09098]
gi|390837266|gb|EIP01697.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4203]
gi|390840073|gb|EIP04132.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4196]
gi|390842295|gb|EIP06149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09195]
gi|390855683|gb|EIP18365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14301]
gi|390860078|gb|EIP22405.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4421]
gi|390860499|gb|EIP22813.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14313]
gi|390871774|gb|EIP33154.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4422]
gi|390876376|gb|EIP37362.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4013]
gi|390886183|gb|EIP46321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4402]
gi|390888167|gb|EIP48063.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4439]
gi|390894981|gb|EIP54471.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4436]
gi|390904185|gb|EIP63201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1738]
gi|390910584|gb|EIP69315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4437]
gi|390911824|gb|EIP70505.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1734]
gi|390915106|gb|EIP73624.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4448]
gi|390925021|gb|EIP82757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1863]
gi|390926191|gb|EIP83785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1845]
gi|391254799|gb|EIQ13958.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2850-71]
gi|391256935|gb|EIQ16057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri CCH060]
gi|391259140|gb|EIQ18215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-1770]
gi|391273844|gb|EIQ32662.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-404]
gi|391288800|gb|EIQ47299.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3226-85]
gi|391289062|gb|EIQ47558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 4444-74]
gi|391289279|gb|EIQ47774.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3233-85]
gi|391296885|gb|EIQ54961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 4822-66]
gi|391309585|gb|EIQ67253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa12]
gi|391315323|gb|EIQ72856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPEC C342-62]
gi|391320476|gb|EIQ77311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1235-66]
gi|394390768|gb|EJE67728.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9602]
gi|394394617|gb|EJE71180.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10224]
gi|394399938|gb|EJE75899.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9634]
gi|394405881|gb|EJE80978.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9553]
gi|394409053|gb|EJE83640.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9455]
gi|394411992|gb|EJE86172.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10021]
gi|394431103|gb|EJF03346.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10030]
gi|394433366|gb|EJF05398.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9952]
gi|397786921|gb|EJK97752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_O31]
gi|397901492|gb|EJL17838.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 6603-63]
gi|397903015|gb|EJL19322.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei str. Moseley]
gi|404292799|gb|EJZ49590.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 1_1_43]
gi|404341889|gb|EJZ68291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1485-80]
gi|406779096|gb|AFS58520.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055679|gb|AFS75730.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063923|gb|AFS84970.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408072550|gb|EKH06871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA7]
gi|408076059|gb|EKH10288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK920]
gi|408086072|gb|EKH19614.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA34]
gi|408090668|gb|EKH23939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA506]
gi|408095713|gb|EKH28678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA507]
gi|408102856|gb|EKH35245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA504]
gi|408110229|gb|EKH42056.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1999]
gi|408116883|gb|EKH48150.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1997]
gi|408122384|gb|EKH53246.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE1487]
gi|408130434|gb|EKH60582.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE037]
gi|408132503|gb|EKH62479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK2001]
gi|408141625|gb|EKH71080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA4]
gi|408150525|gb|EKH79107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA23]
gi|408153413|gb|EKH81808.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA49]
gi|408158627|gb|EKH86744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA45]
gi|408167183|gb|EKH94710.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TT12B]
gi|408172669|gb|EKH99732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MA6]
gi|408174741|gb|EKI01705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5905]
gi|408187057|gb|EKI13038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli CB7326]
gi|408192242|gb|EKI17819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC96038]
gi|408192339|gb|EKI17915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5412]
gi|408198910|gb|EKI24121.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW15901]
gi|408206226|gb|EKI31038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW00353]
gi|408207167|gb|EKI31921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ARS4.2123]
gi|408218930|gb|EKI43112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3006]
gi|408221640|gb|EKI45573.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 07798]
gi|408232197|gb|EKI55448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli N1]
gi|408233176|gb|EKI56311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA38]
gi|408239285|gb|EKI62038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1735]
gi|408249191|gb|EKI71143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1736]
gi|408253460|gb|EKI75054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1737]
gi|408259574|gb|EKI80733.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1846]
gi|408268457|gb|EKI88813.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1847]
gi|408270232|gb|EKI90441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1848]
gi|408278943|gb|EKI98610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1849]
gi|408285382|gb|EKJ04412.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1850]
gi|408288147|gb|EKJ06985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1856]
gi|408300618|gb|EKJ18303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1862]
gi|408301170|gb|EKJ18824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1864]
gi|408310093|gb|EKJ27177.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1865]
gi|408318347|gb|EKJ34562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1868]
gi|408318838|gb|EKJ35040.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1866]
gi|408331656|gb|EKJ46800.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1869]
gi|408337176|gb|EKJ51912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE098]
gi|408338661|gb|EKJ53307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1870]
gi|408347913|gb|EKJ62056.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1288]
gi|408350693|gb|EKJ64541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK523]
gi|408353295|gb|EKJ66817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1304]
gi|408457120|gb|EKJ80921.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AD30]
gi|408559015|gb|EKK35358.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.2239]
gi|408559379|gb|EKK35702.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4870]
gi|408560350|gb|EKK36614.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 6.0172]
gi|408573158|gb|EKK49017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0566]
gi|408573671|gb|EKK49501.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0569]
gi|408585479|gb|EKK60346.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0586]
gi|408590505|gb|EKK64980.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.2524]
gi|408592320|gb|EKK66712.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0833]
gi|408604557|gb|EKK78131.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0869]
gi|408605963|gb|EKK79443.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0416]
gi|408611154|gb|EKK84516.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.0221]
gi|408617329|gb|EKK90451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0821]
gi|412961687|emb|CCK45594.1| ATP-dependent specificity component of clpP serine protease
[Escherichia coli chi7122]
gi|412968302|emb|CCJ42919.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli]
gi|421934147|gb|EKT91924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H11 str. CFSAN001630]
gi|421945315|gb|EKU02532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CFSAN001629]
gi|421946797|gb|EKU03911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H8 str. CFSAN001632]
gi|427214752|gb|EKV84024.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1042]
gi|427217282|gb|EKV86351.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 89.0511]
gi|427217768|gb|EKV86820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1467]
gi|427234005|gb|EKW01714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.2281]
gi|427234226|gb|EKW01925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0039]
gi|427236319|gb|EKW03900.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0091]
gi|427251582|gb|EKW18145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0056]
gi|427253164|gb|EKW19607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0055]
gi|427254458|gb|EKW20819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 94.0618]
gi|427270576|gb|EKW35454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0943]
gi|427271064|gb|EKW35913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0183]
gi|427276297|gb|EKW40871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.1288]
gi|427286556|gb|EKW50394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0428]
gi|427292271|gb|EKW55625.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0427]
gi|427293896|gb|EKW57116.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0939]
gi|427304914|gb|EKW67534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0003]
gi|427306554|gb|EKW69073.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0932]
gi|427311008|gb|EKW73228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0107]
gi|427321630|gb|EKW83309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.1742]
gi|427322537|gb|EKW84168.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0007]
gi|427334471|gb|EKW95540.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0713]
gi|427334774|gb|EKW95842.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0678]
gi|427336798|gb|EKW97747.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0672]
gi|429260205|gb|EKY43798.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0109]
gi|429261865|gb|EKY45257.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0010]
gi|429351547|gb|EKY88267.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02030]
gi|429352250|gb|EKY88966.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429353008|gb|EKY89717.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02092]
gi|429366921|gb|EKZ03522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02093]
gi|429367832|gb|EKZ04424.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02281]
gi|429370327|gb|EKZ06893.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02318]
gi|429382714|gb|EKZ19178.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02913]
gi|429384947|gb|EKZ21401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03943]
gi|429385470|gb|EKZ21923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03439]
gi|429397163|gb|EKZ33510.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-04080]
gi|429399391|gb|EKZ35712.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429399699|gb|EKZ36019.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429410453|gb|EKZ46675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429412353|gb|EKZ48550.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429419338|gb|EKZ55476.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429427897|gb|EKZ63977.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429434741|gb|EKZ70765.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429435565|gb|EKZ71583.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429440106|gb|EKZ76085.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429444706|gb|EKZ80651.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429451011|gb|EKZ86903.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0466]
gi|429456503|gb|EKZ92348.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9941]
gi|430879592|gb|ELC02923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE4]
gi|430880734|gb|ELC04009.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE2]
gi|430888883|gb|ELC11554.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE10]
gi|430891424|gb|ELC13960.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE5]
gi|430901425|gb|ELC23393.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE12]
gi|430909944|gb|ELC31302.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE16]
gi|430912045|gb|ELC33296.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE15]
gi|430918694|gb|ELC39695.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE25]
gi|430922723|gb|ELC43470.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE21]
gi|430929270|gb|ELC49781.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE26]
gi|430932804|gb|ELC53223.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE28]
gi|430938443|gb|ELC58684.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE39]
gi|430947422|gb|ELC67120.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE181]
gi|430956176|gb|ELC74852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE187]
gi|430966662|gb|ELC84025.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE188]
gi|430969561|gb|ELC86665.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE189]
gi|430974576|gb|ELC91499.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE193]
gi|430976250|gb|ELC93125.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE191]
gi|430985238|gb|ELD01844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE201]
gi|430992493|gb|ELD08864.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE204]
gi|430997201|gb|ELD13468.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE205]
gi|430999938|gb|ELD16012.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE206]
gi|431010398|gb|ELD24746.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE208]
gi|431010816|gb|ELD25160.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE210]
gi|431013140|gb|ELD26874.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE213]
gi|431018568|gb|ELD31999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE212]
gi|431027823|gb|ELD40868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE214]
gi|431042148|gb|ELD52640.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE220]
gi|431044966|gb|ELD55221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE224]
gi|431045629|gb|ELD55859.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE228]
gi|431054711|gb|ELD64280.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE230]
gi|431057197|gb|ELD66667.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE233]
gi|431063819|gb|ELD73033.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE234]
gi|431064546|gb|ELD73413.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE235]
gi|431078331|gb|ELD85389.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE236]
gi|431085331|gb|ELD91444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE237]
gi|431087078|gb|ELD93083.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE47]
gi|431099581|gb|ELE04601.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE51]
gi|431103110|gb|ELE07780.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE53]
gi|431108817|gb|ELE12788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE56]
gi|431110771|gb|ELE14688.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE55]
gi|431119565|gb|ELE22564.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE57]
gi|431124017|gb|ELE26671.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE58]
gi|431133001|gb|ELE34999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE60]
gi|431133990|gb|ELE35956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE62]
gi|431140545|gb|ELE42311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE67]
gi|431144002|gb|ELE45710.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE66]
gi|431151485|gb|ELE52500.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE72]
gi|431158152|gb|ELE58773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE75]
gi|431162900|gb|ELE63340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE76]
gi|431165157|gb|ELE65515.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE77]
gi|431174034|gb|ELE74095.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE81]
gi|431174527|gb|ELE74572.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE80]
gi|431184354|gb|ELE84112.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE86]
gi|431185132|gb|ELE84862.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE83]
gi|431193337|gb|ELE92673.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE87]
gi|431195633|gb|ELE94602.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE93]
gi|431203797|gb|ELF02387.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE111]
gi|431204694|gb|ELF03252.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE116]
gi|431207362|gb|ELF05619.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE142]
gi|431213760|gb|ELF11616.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE119]
gi|431225053|gb|ELF22262.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE143]
gi|431225242|gb|ELF22447.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE156]
gi|431230816|gb|ELF26586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE161]
gi|431246949|gb|ELF41192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE169]
gi|431259674|gb|ELF52037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE8]
gi|431267054|gb|ELF58587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE9]
gi|431268363|gb|ELF59837.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE17]
gi|431276655|gb|ELF67675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE18]
gi|431278567|gb|ELF69557.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE45]
gi|431286363|gb|ELF77189.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE23]
gi|431286852|gb|ELF77672.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE42]
gi|431295829|gb|ELF85561.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE43]
gi|431300632|gb|ELF90183.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE29]
gi|431305616|gb|ELF93937.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE22]
gi|431312009|gb|ELG00157.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE46]
gi|431313381|gb|ELG01354.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE48]
gi|431319279|gb|ELG06963.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE50]
gi|431320739|gb|ELG08369.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE54]
gi|431330864|gb|ELG18128.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE59]
gi|431332058|gb|ELG19301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE63]
gi|431342017|gb|ELG29013.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE65]
gi|431342483|gb|ELG29462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE78]
gi|431345874|gb|ELG32788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE79]
gi|431351310|gb|ELG38100.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE84]
gi|431357442|gb|ELG44109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE101]
gi|431357852|gb|ELG44518.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE91]
gi|431368953|gb|ELG55184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE115]
gi|431370759|gb|ELG56552.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE118]
gi|431375270|gb|ELG60614.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE123]
gi|431380188|gb|ELG65088.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE135]
gi|431388656|gb|ELG72379.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE136]
gi|431391890|gb|ELG75494.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE140]
gi|431397253|gb|ELG80709.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE141]
gi|431402565|gb|ELG85877.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE144]
gi|431405201|gb|ELG88444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE147]
gi|431408149|gb|ELG91341.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE146]
gi|431413554|gb|ELG96319.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE154]
gi|431419992|gb|ELH02326.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE158]
gi|431425506|gb|ELH07576.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE165]
gi|431430035|gb|ELH11869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE192]
gi|431437416|gb|ELH18926.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE194]
gi|431447199|gb|ELH27941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE190]
gi|431454779|gb|ELH35137.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE183]
gi|431456808|gb|ELH37151.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE184]
gi|431463012|gb|ELH43206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE196]
gi|431470701|gb|ELH50598.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE197]
gi|431475910|gb|ELH55714.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE203]
gi|431478717|gb|ELH58462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE202]
gi|431482264|gb|ELH61967.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE209]
gi|431485752|gb|ELH65409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE207]
gi|431498788|gb|ELH77973.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE217]
gi|431506267|gb|ELH84865.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE215]
gi|431509567|gb|ELH87816.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE218]
gi|431514221|gb|ELH92063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE223]
gi|431517285|gb|ELH94807.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE227]
gi|431519384|gb|ELH96836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE229]
gi|431535947|gb|ELI12282.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE104]
gi|431537564|gb|ELI13681.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE105]
gi|431541070|gb|ELI16520.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE106]
gi|431545990|gb|ELI20633.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE109]
gi|431555550|gb|ELI29390.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE113]
gi|431560181|gb|ELI33702.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE112]
gi|431560391|gb|ELI33905.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE117]
gi|431572898|gb|ELI45722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE120]
gi|431574219|gb|ELI47001.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE124]
gi|431575872|gb|ELI48595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE122]
gi|431588359|gb|ELI59644.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE125]
gi|431591181|gb|ELI62181.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE128]
gi|431593674|gb|ELI63966.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE129]
gi|431601213|gb|ELI70730.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE131]
gi|431606030|gb|ELI75414.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE133]
gi|431610204|gb|ELI79505.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE137]
gi|431615214|gb|ELI84344.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE138]
gi|431622852|gb|ELI91537.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE145]
gi|431631767|gb|ELJ00073.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE150]
gi|431636889|gb|ELJ05008.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE153]
gi|431649336|gb|ELJ16694.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE157]
gi|431650109|gb|ELJ17446.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE160]
gi|431651636|gb|ELJ18875.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE163]
gi|431663401|gb|ELJ30163.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE166]
gi|431665036|gb|ELJ31763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE167]
gi|431666688|gb|ELJ33315.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE168]
gi|431676788|gb|ELJ42871.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE174]
gi|431678638|gb|ELJ44634.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE176]
gi|431682067|gb|ELJ47836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE177]
gi|431692290|gb|ELJ57728.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE179]
gi|431694182|gb|ELJ59567.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE180]
gi|431696253|gb|ELJ61440.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE232]
gi|431709789|gb|ELJ74237.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE88]
gi|431710589|gb|ELJ74963.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE82]
gi|431711867|gb|ELJ76174.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE85]
gi|431721844|gb|ELJ85836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE90]
gi|431725794|gb|ELJ89633.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE94]
gi|431726375|gb|ELJ90185.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE95]
gi|431733144|gb|ELJ96585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE97]
gi|431736023|gb|ELJ99365.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE99]
gi|432347010|gb|ELL41474.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J96]
gi|441609775|emb|CCP94814.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|441655106|emb|CCQ00169.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|441712014|emb|CCQ07479.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli Nissle 1917]
gi|443420974|gb|AGC85878.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O78]
gi|444542454|gb|ELV21812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0814]
gi|444550932|gb|ELV28950.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 09BKT078844]
gi|444551799|gb|ELV29675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0815]
gi|444565050|gb|ELV41951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0839]
gi|444567161|gb|ELV43931.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0816]
gi|444571480|gb|ELV47962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0848]
gi|444582365|gb|ELV58159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1753]
gi|444585182|gb|ELV60762.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1775]
gi|444586124|gb|ELV61645.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1793]
gi|444600004|gb|ELV74860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 700728]
gi|444600470|gb|ELV75306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA11]
gi|444608387|gb|ELV82920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1805]
gi|444614924|gb|ELV89149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA13]
gi|444615590|gb|ELV89794.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA19]
gi|444623579|gb|ELV97499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA2]
gi|444632671|gb|ELW06226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA48]
gi|444632892|gb|ELW06441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA47]
gi|444637805|gb|ELW11170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA8]
gi|444647985|gb|ELW20941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 7.1982]
gi|444650091|gb|ELW22943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1781]
gi|444654181|gb|ELW26875.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1762]
gi|444663162|gb|ELW35407.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA35]
gi|444667435|gb|ELW39473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4880]
gi|444672858|gb|ELW44544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0083]
gi|444674581|gb|ELW46111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0670]
gi|449322677|gb|EMD12660.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O08]
gi|449324925|gb|EMD14845.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli SEPT362]
gi|449324968|gb|EMD14887.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli S17]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|423715371|ref|ZP_17689595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae F9251]
gi|395430207|gb|EJF96258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae F9251]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/317 (54%), Positives = 231/317 (72%), Gaps = 25/317 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + + PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S KRS
Sbjct: 58 GVKVRDGVPTPQEIISVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS--KRS-------- 107
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 108 -------DIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVE 160
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL +DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 161 NIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTI 220
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A
Sbjct: 221 ASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA---- 276
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
D + +E DLI +GLIPEF+GR P++ +L L N LVQ+L++PKNAL
Sbjct: 277 ---PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDINALVQILSQPKNALV 333
Query: 558 KQYRKMFQM-NGQAAFY 573
KQY+++F+M N + AF+
Sbjct: 334 KQYQRLFEMENVELAFH 350
>gi|402758021|ref|ZP_10860277.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
NCTC 7422]
Length = 436
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 225/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWATKAL----PKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ + +E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 THGHQE------IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D+ S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 K------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFTME 342
>gi|366160316|ref|ZP_09460178.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia sp.
TW09308]
gi|432371212|ref|ZP_19614276.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE11]
gi|430900425|gb|ELC22444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE11]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|254282549|ref|ZP_04957517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium NOR51-B]
gi|219678752|gb|EED35101.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium NOR51-B]
Length = 427
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/308 (57%), Positives = 222/308 (72%), Gaps = 25/308 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI + LD++VIGQ+RAK+VLSVAVYNHY R+ R A +S
Sbjct: 63 DSLPVPHEIKQILDQYVIGQQRAKRVLSVAVYNHYKRL-------RYAPKSGG------- 108
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 -DDVELSKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 LLQKCDYDVERAQVGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGV 500
+G RKHP+ + +Q+DT +ILFICGGAF ++K I R + IGF A V++ R G
Sbjct: 228 QGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIKNRSEKGGIGFAAEVKSKDETRKFGE 287
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
T + +E DL+ YGLIPEFVGR PV+ +L L E L+Q+LTEP+NAL KQY
Sbjct: 288 T--------LSDLEPEDLVQYGLIPEFVGRLPVIATLEELDEAALIQILTEPRNALTKQY 339
Query: 561 RKMFQMNG 568
KMF M G
Sbjct: 340 AKMFDMEG 347
>gi|170078143|ref|YP_001734781.1| ATP-dependent protease ATP-binding subunit ClpX [Synechococcus sp.
PCC 7002]
gi|238692806|sp|B1XN45.1|CLPX_SYNP2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169885812|gb|ACA99525.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synechococcus
sp. PCC 7002]
Length = 443
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 219/305 (71%), Gaps = 20/305 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD- 323
P P+EI LD+ VIGQ+ AKKVLSVAVYNHY R+ S D D
Sbjct: 77 IPKPREIKHYLDEHVIGQDEAKKVLSVAVYNHYKRL-------------SLMEDDDADPV 123
Query: 324 -DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 124 ADGIELHKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLR 183
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +VA AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 184 LLQVADLDVAEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 243
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT++ILFICGGAFV ++K I R S+GF P G
Sbjct: 244 QGGRKHPYQDCIQIDTRNILFICGGAFVGLDKVIERRVGKKSMGFVRPGEE-----GSAK 298
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T+ L++ + DL+ YG+IPEF+GR PV+ SL L E LV++LT+PKNAL KQY+K
Sbjct: 299 EQRTAELLQHLSPEDLVKYGMIPEFIGRIPVIASLSPLDEEALVEILTQPKNALVKQYKK 358
Query: 563 MFQMN 567
+ +M+
Sbjct: 359 LLKMD 363
>gi|82542926|ref|YP_406873.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella boydii
Sb227]
gi|123560438|sp|Q325G3.1|CLPX_SHIBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81244337|gb|ABB65045.1| ATP-dependent specificity component of clpP serine protease
[Shigella boydii Sb227]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|407793808|ref|ZP_11140839.1| ATP-dependent protease ATP-binding subunit ClpX [Idiomarina
xiamenensis 10-D-4]
gi|407213962|gb|EKE83813.1| ATP-dependent protease ATP-binding subunit ClpX [Idiomarina
xiamenensis 10-D-4]
Length = 425
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/307 (56%), Positives = 223/307 (72%), Gaps = 26/307 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P PK+I LD +VIGQE AKKVLSVAVYNHY R+ + QK
Sbjct: 62 DELPVPKQIRHHLDDYVIGQELAKKVLSVAVYNHYKRLRTNAKQK--------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL KSNILL+GPTGSGKT LA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DQIELGKSNILLIGPTGSGKTFLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRA-NMRAGGV 500
+G RKHP+ + +Q+DT ILFICGGAF + K I +R + IGFGA V++ N RA G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLNKVIEQRLATGTGIGFGADVKSKNQRAEG- 284
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
++ VE DL+ YGLIPEF+GR PV+ +L L E+ LVQ+L+EPKNAL KQY
Sbjct: 285 -------EVIAQVEPEDLVRYGLIPEFIGRLPVVATLNELDEDALVQILSEPKNALTKQY 337
Query: 561 RKMFQMN 567
+F+M
Sbjct: 338 SALFEME 344
>gi|409436887|ref|ZP_11264046.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium
mesoamericanum STM3625]
gi|408751361|emb|CCM75200.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium
mesoamericanum STM3625]
Length = 425
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 227/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + + +
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHATK-----------------NSE 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|17546431|ref|NP_519833.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia
solanacearum GMI1000]
gi|21263463|sp|Q8XYP6.1|CLPX_RALSO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|17428729|emb|CAD15414.1| probable atp-dependent clp protease atp-binding subunit clpx
protein [Ralstonia solanacearum GMI1000]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 224/312 (71%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG + + PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + +
Sbjct: 59 GGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK---------- 108
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDV
Sbjct: 109 -------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I++R S IGFGA V++
Sbjct: 222 MASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIITQRSDKSGIGFGAEVKSKEE 281
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ ++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNA+
Sbjct: 282 RD-------VNEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNAI 334
Query: 557 GKQYRKMFQMNG 568
KQY+K+ M G
Sbjct: 335 VKQYQKLLAMEG 346
>gi|357974123|ref|ZP_09138094.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
KC8]
Length = 422
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 220/302 (72%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EICK LD +VIGQ +AK+VLSVAV+NHY R+ + G
Sbjct: 65 PSPQEICKVLDDYVIGQMQAKRVLSVAVHNHYKRLAH-----------------GAKGAE 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I +R Q SIGFGA V A D
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAHVAA-------PDERR 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ E DL+ +GLIPEFVGR PV+ +L L E LV++L+EPKNAL KQY+K+F+
Sbjct: 281 TGEVLRQCEPEDLLKFGLIPEFVGRLPVIATLEDLDEPALVKILSEPKNALVKQYQKLFE 340
Query: 566 MN 567
M
Sbjct: 341 ME 342
>gi|432415390|ref|ZP_19658021.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE44]
gi|430943766|gb|ELC63872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE44]
Length = 424
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|325294781|ref|YP_004281295.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065229|gb|ADY73236.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 411
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/300 (56%), Positives = 220/300 (73%), Gaps = 25/300 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTPKEI + LD++V+GQE AKKVLSVAVYNHY RI + D
Sbjct: 60 DKLPTPKEIKEFLDQYVVGQEEAKKVLSVAVYNHYKRIMSNE-----------------D 102
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VELEKSNILL+GPTGSGKTLLA++LA+ ++VPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 103 TSEVELEKSNILLIGPTGSGKTLLARSLAKLLDVPFAIADATTLTEAGYVGEDVENILLR 162
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
L+ +D+++ A++GI+YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP
Sbjct: 163 LIQAADFDIEKAERGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTIANVPP 222
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP IQIDT +ILFICGGAFV +E I++R +GF A V+ N
Sbjct: 223 QGGRKHPHQQYIQIDTSNILFICGGAFVGLEDIIAKRIGKGGMGFTADVKRN-------- 274
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ S L++ VE DL+ +GLIPE +GR PV+ +L LTE L+++L EPKNAL KQYRK
Sbjct: 275 KLERSELLKHVEPDDLVKFGLIPELIGRLPVIATLNELTEEDLIRILKEPKNALVKQYRK 334
>gi|149926125|ref|ZP_01914387.1| ATP-dependent protease ATP-binding subunit [Limnobacter sp. MED105]
gi|149824943|gb|EDM84155.1| ATP-dependent protease ATP-binding subunit [Limnobacter sp. MED105]
Length = 423
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/307 (55%), Positives = 226/307 (73%), Gaps = 24/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K PTP+EI LD++VIGQ++AK+VL+VAVYNHY R+ + S +
Sbjct: 60 GDKLPTPQEIRSILDQYVIGQDKAKRVLAVAVYNHYKRLRHMSKK--------------- 104
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+
Sbjct: 105 --DDIELTKSNILLVGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQ 162
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 163 KLLQSCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 222
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP D +QIDT ++LFI GGAF ++K I R + S IGFGA V++ G V
Sbjct: 223 PQGGRKHPNQDFVQIDTTNVLFIVGGAFEGLDKVIRNRSERSGIGFGATVKSK-EEGNV- 280
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+L+ VE DLI +G+IPE VGR PV+ +L L E L+++LT+PKNA+ KQ+
Sbjct: 281 -----GTLLAEVEPEDLIKFGIIPELVGRLPVIATLEELDEPALIEILTKPKNAMVKQFE 335
Query: 562 KMFQMNG 568
K+ +M+G
Sbjct: 336 KLLEMDG 342
>gi|103488220|ref|YP_617781.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingopyxis
alaskensis RB2256]
gi|123379515|sp|Q1GPH4.1|CLPX_SPHAL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|98978297|gb|ABF54448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingopyxis
alaskensis RB2256]
Length = 423
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/304 (57%), Positives = 222/304 (73%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EIC+ LD +VIGQ +AK+VLSVAV+NHY R+ N GE
Sbjct: 65 PTPLEICQHLDAYVIGQNKAKRVLSVAVHNHYKRLANSGR-----GED------------ 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGSGKTLLAQTLARFLDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 SSDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFI GGAF +EK I +R Q SIGFGA V RAG V
Sbjct: 228 RKHPQQEFLQVDTTNILFIAGGAFAGLEKIIGDRLQGKSIGFGAHVAGPDERRAGEV--- 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ +E DL+ +GLIPEFVGR PV+ +L L + LV++L EPKNAL KQY+K+
Sbjct: 285 ------LKQIEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVKILGEPKNALVKQYKKL 338
Query: 564 FQMN 567
F +
Sbjct: 339 FDLE 342
>gi|375259345|ref|YP_005018515.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
KCTC 1686]
gi|397656326|ref|YP_006497028.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca E718]
gi|402843203|ref|ZP_10891605.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. OBRC7]
gi|421724876|ref|ZP_16164081.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
M5al]
gi|423101609|ref|ZP_17089311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5242]
gi|423106997|ref|ZP_17094692.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5243]
gi|423112882|ref|ZP_17100573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5245]
gi|423127776|ref|ZP_17115455.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5250]
gi|365908823|gb|AEX04276.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
KCTC 1686]
gi|376389123|gb|EHT01815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5243]
gi|376390376|gb|EHT03062.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5245]
gi|376391397|gb|EHT04076.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5242]
gi|376394815|gb|EHT07465.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5250]
gi|394344932|gb|AFN31053.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca E718]
gi|402277834|gb|EJU26902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. OBRC7]
gi|410374310|gb|EKP28986.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
M5al]
Length = 424
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FSLEG 345
>gi|254294161|ref|YP_003060184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Hirschia
baltica ATCC 49814]
gi|254042692|gb|ACT59487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hirschia
baltica ATCC 49814]
Length = 423
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 227/310 (73%), Gaps = 28/310 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ +AK+VL+VAV+NHY R+ + S + +
Sbjct: 65 PTPQEICDVLDDYVIGQAQAKRVLAVAVHNHYKRLSHASK----------------NGNE 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR--ANMRAGGVTDA 503
RKHP+ + +Q+DT ++LFICGGAF ++K IS+R Q SSIGFGA V + R G V
Sbjct: 229 RKHPQQEFLQVDTTNMLFICGGAFAGLDKVISDRGQGSSIGFGATVSDPDDRRVGAV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ E DL+ +GLIPEF+GR PV+ +L L + LV +LT+PKNAL KQY+++
Sbjct: 286 ------LQDCEPEDLVKFGLIPEFIGRLPVIATLEDLDTDSLVMILTQPKNALLKQYQRL 339
Query: 564 FQM-NGQAAF 572
F M N Q F
Sbjct: 340 FDMENVQLTF 349
>gi|331001371|ref|ZP_08324995.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Parasutterella excrementihominis YIT 11859]
gi|329568630|gb|EGG50432.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Parasutterella excrementihominis YIT 11859]
Length = 441
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/309 (55%), Positives = 229/309 (74%), Gaps = 22/309 (7%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L + PTPKEI LD++VIGQE+AKKVLSVAVYNHY R+ + + G+ S
Sbjct: 86 LYGELPTPKEIYANLDQYVIGQEQAKKVLSVAVYNHYKRL-----RSKFIGDDS------ 134
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D+ VE++KSNILL+GPTGSGKTLLA++LA+ +NVPF IADATTLT+AGYVGEDVE+++
Sbjct: 135 --DEKVEIQKSNILLIGPTGSGKTLLAQSLAKMLNVPFAIADATTLTEAGYVGEDVENVI 192
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL + ++ AQ GI+Y+DE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGTV NV
Sbjct: 193 LKLLQSCNMDLKRAQMGIIYLDEIDKIARKSENPSITRDVSGEGVQQALLKLVEGTVANV 252
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR-ANMRAGG 499
P G RKHP+G+NI +DT +ILFICGGAF ++K I R + S IGF A V+ A+ R+ G
Sbjct: 253 PAAGGRKHPQGNNIPVDTSNILFICGGAFEGLDKIIRRRTERSGIGFEADVKGADDRSEG 312
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
++ +E+ DL+ YGLIPE VGR PV+ +L L E L+++LTEPKNA+ KQ
Sbjct: 313 --------EVLRDIEAKDLVRYGLIPELVGRLPVIATLDDLDEEALIRILTEPKNAVLKQ 364
Query: 560 YRKMFQMNG 568
Y ++F++ G
Sbjct: 365 YARLFELEG 373
>gi|295109357|emb|CBL23310.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ruminococcus
obeum A2-162]
Length = 437
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/301 (57%), Positives = 220/301 (73%), Gaps = 25/301 (8%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVE 327
P+EI K LD +VIGQ+ AKK LSVAVYNHY RI ++S D VE
Sbjct: 68 PEEIHKILDDYVIGQDEAKKALSVAVYNHYKRI------------TASRNLD------VE 109
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
L+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K++ +
Sbjct: 110 LQKSNILMLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKIIQAA 169
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
DY++ AQ GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G RK
Sbjct: 170 DYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKILEGTVASVPPQGGRK 229
Query: 448 HPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTS 507
HP + IQIDT +ILFICGGAF IEKTI R+ SIGFGA V V +
Sbjct: 230 HPHQEFIQIDTTNILFICGGAFDGIEKTIEARQDTKSIGFGADV-------SVQEERNIG 282
Query: 508 SLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+++ V D I YGLIPEF+GR P++V+L L E L+++L EPKN+L KQY K+F+++
Sbjct: 283 EVLKDVMPEDFIKYGLIPEFIGRVPIVVTLDGLDEEALIRILKEPKNSLTKQYHKLFELD 342
Query: 568 G 568
G
Sbjct: 343 G 343
>gi|258646881|ref|ZP_05734350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
invisus DSM 15470]
gi|260404320|gb|EEW97867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
invisus DSM 15470]
Length = 412
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/314 (54%), Positives = 229/314 (72%), Gaps = 25/314 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTP++I + +D++VI Q+ AK L+VAVYNHY RI E DD
Sbjct: 61 ELPTPEKIKEYMDQYVIEQDDAKVALAVAVYNHYKRIRYEK-----------------DD 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNI+++GPTGSGKTLLA+TLAR++NVPF I+DATTLT+AGYVGEDVE+IL +L
Sbjct: 104 DGVELQKSNIIMLGPTGSGKTLLAQTLARFLNVPFAISDATTLTEAGYVGEDVENILLRL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ AQ+GIVYIDE+DKI KK+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +
Sbjct: 164 IQAADYDLERAQRGIVYIDEIDKIAKKSENPSITRDVSGEGVQQALLKILEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQ+DT +ILFICGGAF I+K I+ R S++GFGA ++ D
Sbjct: 224 GGRKHPNQEMIQLDTSNILFICGGAFAGIDKVIARRTTRSTMGFGADIKK-------ADE 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +++ VE DL+ +GLIPEF+GR PV+V+L L E L+++L+EPKNAL +QY+K+
Sbjct: 277 KDIAEVLQNVEPEDLLKFGLIPEFIGRLPVIVALHPLKEEALIRILSEPKNALIRQYQKL 336
Query: 564 FQM-NGQAAFYGKC 576
M N + F GK
Sbjct: 337 LGMDNVELVFEGKA 350
>gi|312898488|ref|ZP_07757878.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
micronuciformis F0359]
gi|310620407|gb|EFQ03977.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
micronuciformis F0359]
Length = 417
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 167/304 (54%), Positives = 221/304 (72%), Gaps = 22/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTP EI K LD +VIGQE AKK LSVAVYNHY R+ + S++ D
Sbjct: 62 ELPTPHEIKKNLDDYVIGQEAAKKTLSVAVYNHYKRLQSNSNK---------------DK 106
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNI+++GPTGSGKTLLA+TLA++++VPF IADAT+LT+AGYVGEDVE+ L KL
Sbjct: 107 DDVELQKSNIVMVGPTGSGKTLLAQTLAKFLDVPFAIADATSLTEAGYVGEDVENCLLKL 166
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +D+++A A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT NVP +
Sbjct: 167 IQAADFDIAKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTEANVPPQ 226
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + +QIDT +ILFICGGAF I+KTI RR + ++GFGA +
Sbjct: 227 GGRKHPHQEMLQIDTTNILFICGGAFDGIDKTIRSRRTEKNMGFGADIHKKNEES----- 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L++ + +DL +GLIPE +GR PVLV+L L E ++ +LTEPKNAL KQY+KM
Sbjct: 282 --VEELLKEIIPTDLQKFGLIPELIGRLPVLVTLNPLDEEAMIHILTEPKNALVKQYQKM 339
Query: 564 FQMN 567
M+
Sbjct: 340 LGMD 343
>gi|299066732|emb|CBJ37926.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum CMR15]
Length = 424
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 224/312 (71%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG + + PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + +
Sbjct: 59 GGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK---------- 108
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDV
Sbjct: 109 -------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I++R S IGFGA V++
Sbjct: 222 MASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIITQRSDKSGIGFGAEVKSKEE 281
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ ++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNA+
Sbjct: 282 RD-------VNEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNAI 334
Query: 557 GKQYRKMFQMNG 568
KQY+K+ M G
Sbjct: 335 VKQYQKLLAMEG 346
>gi|255263549|ref|ZP_05342891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thalassiobium
sp. R2A62]
gi|255105884|gb|EET48558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thalassiobium
sp. R2A62]
Length = 422
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/317 (54%), Positives = 229/317 (72%), Gaps = 23/317 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G + PTPKEIC+ LD +VIGQ AK+VLSVAV+NHY R+ + + +S G+
Sbjct: 55 AGLKAADGVPTPKEICEVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAA---KSGGD---- 107
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
+EL KSNI+L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDV
Sbjct: 108 ---------IELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDV 158
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 159 ENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGT 218
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V +VP +G RKHP+ + +Q+DT +ILFI GGAF ++K I++R + S++GFGA VR
Sbjct: 219 VASVPPQGGRKHPQQEFLQVDTTNILFIVGGAFAGLDKIIAQRGKGSAMGFGADVREKND 278
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
G L +E DL+ +GLIPEFVGR PVL +L L E+ L+ +LTEPKNAL
Sbjct: 279 KG-------IGELFLDLEPEDLLKFGLIPEFVGRLPVLATLQDLDEDALITILTEPKNAL 331
Query: 557 GKQYRKMFQMNGQAAFY 573
KQY+++F++ A +
Sbjct: 332 VKQYQRLFELEETALTF 348
>gi|110680062|ref|YP_683069.1| ATP-dependent protease ATP-binding subunit ClpX [Roseobacter
denitrificans OCh 114]
gi|123361806|sp|Q165G0.1|CLPX_ROSDO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|109456178|gb|ABG32383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
denitrificans OCh 114]
Length = 421
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC LD +VIGQ AK+VLSVAV+NHY R+ + + G+
Sbjct: 64 PTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRL----NHAQKGGD------------- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I+ R + S++GFGA VR N G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGNDDRG------- 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 280 VGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNALVKQYQRLFE 339
Query: 566 MN 567
+
Sbjct: 340 LE 341
>gi|410087015|ref|ZP_11283720.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii SC01]
gi|421492900|ref|ZP_15940259.1| CLPX [Morganella morganii subsp. morganii KT]
gi|455740392|ref|YP_007506658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii subsp. morganii KT]
gi|400193005|gb|EJO26142.1| CLPX [Morganella morganii subsp. morganii KT]
gi|409766244|gb|EKN50338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii SC01]
gi|455421955|gb|AGG32285.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii subsp. morganii KT]
Length = 426
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 224/306 (73%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + LD +VIGQE AKKVL+VAVYNHY R+ N G+ ++
Sbjct: 64 SELPTPHEIRQHLDDYVIGQELAKKVLAVAVYNHYKRLRN--------GDKTA------- 108
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 -DGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTIAAVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K + +R S IGFGA VR G
Sbjct: 228 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVGQRLNTRSGIGFGAEVR------GEK 281
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+
Sbjct: 282 DKATEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELSEDALIQILQEPKNALTKQYQ 341
Query: 562 KMFQMN 567
+F +
Sbjct: 342 ALFSIE 347
>gi|407798619|ref|ZP_11145526.1| ClpX [Oceaniovalibus guishaninsula JLT2003]
gi|407059580|gb|EKE45509.1| ClpX [Oceaniovalibus guishaninsula JLT2003]
Length = 420
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/310 (55%), Positives = 227/310 (73%), Gaps = 25/310 (8%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G G+ PTP+EIC LD +VIGQ AK+VLSVAV+NHY R+ AG+S
Sbjct: 55 GIKSGDGVPTPREICDVLDDYVIGQMHAKRVLSVAVHNHYKRL-------NQAGKSD--- 104
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 105 --------IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVE 156
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 157 NIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTV 216
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILF+CGGAF +++ I++R + SS+GFGA V+A
Sbjct: 217 ASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDRIIAQRGKGSSMGFGAEVKA---- 272
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
D + +E DL+ +GLIPEFVGR PV+ +L L E+ LV +LT+PKNAL
Sbjct: 273 ---PDEKSIGDFFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTKPKNALV 329
Query: 558 KQYRKMFQMN 567
KQY+++F++
Sbjct: 330 KQYQRLFELE 339
>gi|303257391|ref|ZP_07343404.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Burkholderiales bacterium 1_1_47]
gi|302859748|gb|EFL82826.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Burkholderiales bacterium 1_1_47]
Length = 441
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/309 (55%), Positives = 229/309 (74%), Gaps = 22/309 (7%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
L + PTPKEI LD++VIGQE+AKKVLSVAVYNHY R+ + + G+ S
Sbjct: 86 LYGELPTPKEIYANLDQYVIGQEQAKKVLSVAVYNHYKRL-----RSKFIGDDS------ 134
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
D+ VE++KSNILL+GPTGSGKTLLA++LA+ +NVPF IADATTLT+AGYVGEDVE+++
Sbjct: 135 --DEKVEIQKSNILLIGPTGSGKTLLAQSLAKMLNVPFAIADATTLTEAGYVGEDVENVI 192
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
KLL + ++ AQ GI+Y+DE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGTV NV
Sbjct: 193 LKLLQSCNMDLKRAQMGIIYLDEIDKIARKSENPSITRDVSGEGVQQALLKLVEGTVANV 252
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR-ANMRAGG 499
P G RKHP+G+NI +DT +ILFICGGAF ++K I R + S IGF A V+ A+ R+ G
Sbjct: 253 PAAGGRKHPQGNNIPVDTSNILFICGGAFEGLDKIIRRRTERSGIGFEADVKGADDRSEG 312
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
++ +E+ DL+ YGLIPE VGR PV+ +L L E L+++LTEPKNA+ KQ
Sbjct: 313 --------EVLRDIEAKDLVRYGLIPELVGRLPVIATLDDLDEEALIRILTEPKNAVLKQ 364
Query: 560 YRKMFQMNG 568
Y ++F++ G
Sbjct: 365 YARLFELEG 373
>gi|83311890|ref|YP_422154.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetospirillum
magneticum AMB-1]
gi|123541533|sp|Q2W3I0.1|CLPX_MAGSA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|82946731|dbj|BAE51595.1| ATP-dependent protease Clp [Magnetospirillum magneticum AMB-1]
Length = 421
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AKKVLSVAV+NHY R+ + G ++
Sbjct: 64 PTPKDICQVLDDYVIGQSHAKKVLSVAVHNHYKRLQH-----------------GGKNNE 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
++YNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I R + +SIGFGA VR D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGRGTSIGFGADVRG-------PDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PVL +L L + L+ +L++PKNAL KQY+++F+
Sbjct: 280 TGEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|336249037|ref|YP_004592747.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter
aerogenes KCTC 2190]
gi|334735093|gb|AEG97468.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter
aerogenes KCTC 2190]
Length = 424
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FGLEG 345
>gi|393725065|ref|ZP_10344992.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26605]
Length = 422
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/302 (58%), Positives = 222/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ+RAK+VLSVAV+NHY R+ + QK G D
Sbjct: 65 PTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNH--GQK------------GAD--- 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I +R Q SIGFGA V + +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAYVAS-------PEERR 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PV+ +L L LV +LTEPKNAL KQY+K+F
Sbjct: 281 TGETLKAVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNALVKQYQKLFD 340
Query: 566 MN 567
M
Sbjct: 341 ME 342
>gi|158336586|ref|YP_001517760.1| ATP-dependent protease ATP-binding subunit ClpX [Acaryochloris
marina MBIC11017]
gi|189082482|sp|B0C146.1|CLPX_ACAM1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|158306827|gb|ABW28444.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acaryochloris
marina MBIC11017]
Length = 447
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/307 (55%), Positives = 224/307 (72%), Gaps = 19/307 (6%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P++I LD+ VIGQ+ AKKVLSVAVYNHY R+ + S E
Sbjct: 76 NQIPKPRDIKSYLDEHVIGQDEAKKVLSVAVYNHYKRLSISQASADSVAEL--------- 126
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD +EL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 127 DDAIELQKSNILLIGPTGCGKTLLAQTLAQMLDVPFAVADATTLTEAGYVGEDVENILLR 186
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 187 LLQVADLDVEEAQRGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 246
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF--GAPVRANMRAGGV 500
+G RKHP D IQIDT +ILFICGGAFV ++K I +R ++GF +RA +
Sbjct: 247 QGGRKHPYQDCIQIDTTNILFICGGAFVGLDKIIEQRTGKKAMGFIQDGELRAKEQR--- 303
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
T+ ++ +E+ DL+ +G+IPEF GR PV+ + AL E+ L Q+LTEP+NAL KQY
Sbjct: 304 -----TADMLRDLEAEDLVKFGMIPEFTGRIPVMSVIDALDEDVLCQILTEPRNALVKQY 358
Query: 561 RKMFQMN 567
+K+ +M+
Sbjct: 359 QKLLRMD 365
>gi|330829917|ref|YP_004392869.1| ATP-dependent Clp protease ATP-binding subunit clpX [Aeromonas
veronii B565]
gi|406676845|ref|ZP_11084030.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AMC35]
gi|423201788|ref|ZP_17188367.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AER39]
gi|423206427|ref|ZP_17192983.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AMC34]
gi|423209383|ref|ZP_17195937.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AER397]
gi|328805053|gb|AEB50252.1| ATP-dependent Clp protease ATP-binding subunit clpX [Aeromonas
veronii B565]
gi|404615735|gb|EKB12694.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AER39]
gi|404617241|gb|EKB14177.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AER397]
gi|404621979|gb|EKB18844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AMC34]
gi|404625159|gb|EKB21976.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AMC35]
Length = 424
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/309 (56%), Positives = 226/309 (73%), Gaps = 26/309 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
GN+ PTP +I LD +VIGQE AKKVL+VAVYNHY R+ R++GE+S
Sbjct: 61 GNELPTPHQIRAHLDDYVIGQEYAKKVLAVAVYNHYKRL-------RNSGENSG------ 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 108 ----VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQ 163
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 164 KLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP 223
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERR-QDSSIGFGAPVRANMRAGGV 500
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + + IGFGA V++
Sbjct: 224 PQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSVKGTGIGFGAEVKSK------ 277
Query: 501 TDAVVT-SSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
DA T S VE DLI YGLIPEF+GR PV+ +L L E+ L+Q+L EPKNAL KQ
Sbjct: 278 -DAKATLSETFAKVEPEDLIKYGLIPEFIGRLPVVATLTELDESALIQILKEPKNALTKQ 336
Query: 560 YRKMFQMNG 568
Y +F + G
Sbjct: 337 YAALFDLEG 345
>gi|339503122|ref|YP_004690542.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Roseobacter
litoralis Och 149]
gi|338757115|gb|AEI93579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Roseobacter
litoralis Och 149]
Length = 421
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC LD +VIGQ AK+VLSVAV+NHY R+ + + G+
Sbjct: 64 PTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRL----NHAQKGGD------------- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I+ R + S++GFGA VR N G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGNDDRG------- 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 280 VGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNALVKQYQRLFE 339
Query: 566 MN 567
+
Sbjct: 340 LE 341
>gi|300930259|ref|ZP_07145672.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 187-1]
gi|300461831|gb|EFK25324.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 187-1]
Length = 424
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR P++ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPIVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|427724490|ref|YP_007071767.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Leptolyngbya
sp. PCC 7376]
gi|427356210|gb|AFY38933.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Leptolyngbya
sp. PCC 7376]
Length = 446
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/303 (57%), Positives = 220/303 (72%), Gaps = 15/303 (4%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD+ VIGQ AKKVLSVAVYNHY R+ + E DG+
Sbjct: 79 IPKPREIKEYLDEHVIGQNDAKKVLSVAVYNHYKRLSLLPDE-----EEPDPAADGI--- 130
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 --ELHKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLL 188
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP +G
Sbjct: 189 QVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQG 248
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQIDTK+ILFICGGAFV ++K I R S+GF P G
Sbjct: 249 GRKHPYQDCIQIDTKNILFICGGAFVGLDKVIERRVGKKSMGFVRPGEE-----GSNKDQ 303
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T+ L++ + S DL+ YG+IPEF GR PV+ SL +L E+ L+++LT+PKNAL KQYRK+
Sbjct: 304 RTAKLLQHLSSEDLVKYGMIPEFTGRIPVMASLNSLDEDTLIEILTQPKNALVKQYRKLL 363
Query: 565 QMN 567
+M+
Sbjct: 364 KMD 366
>gi|259909251|ref|YP_002649607.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia pyrifoliae
Ep1/96]
gi|224964873|emb|CAX56395.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Erwinia
pyrifoliae Ep1/96]
Length = 424
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVLSVAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K +S+R S IGFGA V++ ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVKSK------SEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|332305575|ref|YP_004433426.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola sp.
4H-3-7+YE-5]
gi|410641919|ref|ZP_11352438.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
chathamensis S18K6]
gi|410646704|ref|ZP_11357154.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
agarilytica NO2]
gi|332172904|gb|AEE22158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Glaciecola
sp. 4H-3-7+YE-5]
gi|410133876|dbj|GAC05553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
agarilytica NO2]
gi|410138821|dbj|GAC10625.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
chathamensis S18K6]
Length = 425
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 221/306 (72%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTPKEI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HDGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFG+ ++ ++
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGSAIK------DIS 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L++ VE DL+ YGLIPEF+GR PVL SL L+E L+Q+L EPKN+L KQY
Sbjct: 280 NKSKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSLTKQYA 339
Query: 562 KMFQMN 567
+F +
Sbjct: 340 ALFSLE 345
>gi|407781585|ref|ZP_11128803.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanibaculum
indicum P24]
gi|407207802|gb|EKE77733.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanibaculum
indicum P24]
Length = 422
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 220/303 (72%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQ AK+VLSVAV+NHY R+ + G +
Sbjct: 63 IPTPTEIRTVLDDYVIGQAHAKRVLSVAVHNHYKRLAH-----------------GAKNG 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILFICGGAF +EK I +R + +SIGFGA V+ D
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFSGLEKIIGQRNKGTSIGFGADVQG-------PDER 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
T ++ VE DL+ +GLIPEF+GR PVL +L L EN LV +LT PKNAL KQY+++F
Sbjct: 279 RTGDVLREVEPEDLLKFGLIPEFIGRLPVLATLEDLDENALVDILTSPKNALVKQYQRLF 338
Query: 565 QMN 567
+M
Sbjct: 339 EME 341
>gi|197105277|ref|YP_002130654.1| ATP-dependent protease ATP-binding subunit ClpX [Phenylobacterium
zucineum HLK1]
gi|238690156|sp|B4RCN8.1|CLPX_PHEZH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|196478697|gb|ACG78225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Phenylobacterium zucineum HLK1]
Length = 420
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 222/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ+ AKKVLSVAV+NHY R+ + + ++
Sbjct: 64 PTPKEIREVLDDYVIGQDHAKKVLSVAVHNHYKRLNHATK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL K+NILL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELGKANILLIGPTGTGKTLLAQTLARIIDVPFTVADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R Q +SIGFGA V D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGQGTSIGFGAKV-------ADPDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + VE DL+ +GLIPEF+GR PV+ +L L E LV++LTEPKNA KQY ++F+
Sbjct: 280 TGEIFRQVEPDDLLRFGLIPEFIGRLPVIATLDDLDEKALVKILTEPKNAFVKQYVRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|374292311|ref|YP_005039346.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
lipoferum 4B]
gi|357424250|emb|CBS87117.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
lipoferum 4B]
Length = 420
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I LD +VIGQ AK+VLSVAV+NHY R+ + G +
Sbjct: 64 PTPRDIHAVLDDYVIGQSYAKRVLSVAVHNHYKRLAH-----------------GTKHND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSIIRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + +SIGFGA VR+ D
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRS-------ADERA 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEF+GR PVL +L L E LV++L++PKNAL KQY+++F+
Sbjct: 280 TGEILHEVEPEDLLKFGLIPEFIGRLPVLATLSDLDEGALVEILSKPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|258516486|ref|YP_003192708.1| ATP-dependent protease ATP-binding subunit ClpX [Desulfotomaculum
acetoxidans DSM 771]
gi|257780191|gb|ACV64085.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfotomaculum acetoxidans DSM 771]
Length = 416
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P PKEI + LD++VIGQE AKK L+VAVYNHY RI G D
Sbjct: 59 PKPKEIKEILDQYVIGQESAKKALAVAVYNHYKRI-----------------NLGGKIDD 101
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL+KSNI+++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 102 VELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENILLKLIQ 161
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 162 AADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 221
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP + IQ+DT ++LFICGGAF I+K I R S+GFGA ++A MR +
Sbjct: 222 RKHPHQEFIQLDTTNVLFICGGAFDGIDKIIQNRTGKKSMGFGAEIKA-MREQRI----- 275
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ + DL+ YGLIPEFVGR PV+V+L L E+ LV++LTEP+NAL KQY K+F+
Sbjct: 276 -GEILSNILPEDLLKYGLIPEFVGRLPVIVTLDMLDEDALVRILTEPRNALIKQYEKLFE 334
Query: 566 MNGQA 570
++G A
Sbjct: 335 LDGVA 339
>gi|256823169|ref|YP_003147132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Kangiella
koreensis DSM 16069]
gi|256796708|gb|ACV27364.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Kangiella
koreensis DSM 16069]
Length = 422
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/303 (55%), Positives = 223/303 (73%), Gaps = 20/303 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + L+++VIGQ+RAKKVLSVAVYNHY R+ ES +++ D
Sbjct: 62 LPKPQEIAEFLEQYVIGQDRAKKVLSVAVYNHYKRL-----------ESEPASSEHKD-- 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 -VELGKSNILLIGPTGSGKTLLAETLARMLEVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT +ILF+CGGAF +EK I ER + IGFGA V+ V +
Sbjct: 228 GRKHPQQEFLQVDTGNILFVCGGAFAGLEKIIQERTEKGGIGFGADVKQ------VKEGR 281
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+++ VE DL+ +GLIPEF+GR P++ +L L E LV++L EPKNAL KQY K+F
Sbjct: 282 AIGEMLKAVEPDDLVKFGLIPEFIGRLPIVTTLQELDEEALVRILIEPKNALTKQYSKLF 341
Query: 565 QMN 567
+
Sbjct: 342 SLE 344
>gi|373455366|ref|ZP_09547202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dialister
succinatiphilus YIT 11850]
gi|371935006|gb|EHO62779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dialister
succinatiphilus YIT 11850]
Length = 411
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/304 (55%), Positives = 222/304 (73%), Gaps = 24/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP+EI K +D++VI Q+ AK L+VAVYNHY RI +E +D
Sbjct: 60 KLPTPEEIKKYMDQYVIEQDDAKMALAVAVYNHYKRIEHEG-----------------ED 102
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNI+++GPTGSGKTLLA+TLAR+++VPF I+DATTLT+AGYVGEDVE+IL +L
Sbjct: 103 DDVELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRL 162
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +
Sbjct: 163 IQAADYDIDKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQ 222
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFICGGAF I+K I R S +GFGA + D
Sbjct: 223 GGRKHPNQEMIQIDTTNILFICGGAFAGIDKVIDRRLTKSVMGFGADIEKK-------DD 275
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ L++ V+ DL+ +GLIPEF+GR PV+V L L E LV++LTEPKNAL +QY+K+
Sbjct: 276 RDMAELLQQVQPEDLLKFGLIPEFIGRLPVIVPLHPLNEEALVKILTEPKNALVRQYQKL 335
Query: 564 FQMN 567
M+
Sbjct: 336 LAMD 339
>gi|222085565|ref|YP_002544095.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
radiobacter K84]
gi|221723013|gb|ACM26169.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 470
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S +
Sbjct: 112 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASK-----------------NGD 154
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 155 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 214
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 215 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 274
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+ G D V
Sbjct: 275 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGAAVK------GPDDRRV 328
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L E +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 329 GEVLRE-LEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFE 387
Query: 566 MN 567
M
Sbjct: 388 ME 389
>gi|347819078|ref|ZP_08872512.1| ATP-dependent protease ATP-binding subunit ClpX [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 421
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP E+ LD +VIGQ+ AK+ L+VAVYNHY R+ ++ ++ D
Sbjct: 65 LPTPVELKHNLDNYVIGQDMAKRTLAVAVYNHYKRLRHKDRARK---------------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ ++
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKIIENRTEASGIGFGASVKSRLQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + +E DLI YGLIPE VGR PV+ +L L+E LVQ+LTEP+NAL KQY K+
Sbjct: 284 -LTEVFAEIEPEDLIKYGLIPELVGRMPVVTALTELSEAALVQILTEPRNALVKQYGKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|429768433|ref|ZP_19300589.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta 470-4]
gi|429189123|gb|EKY29970.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta 470-4]
Length = 422
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI LD +VIGQ AKKVLSVAV+NHY R+ + + ++
Sbjct: 64 PTPKEIRDVLDDYVIGQAHAKKVLSVAVHNHYKRLNHATK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFI GGAF +EK IS R SIGFGA V+ D
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGAGVSIGFGAKVKE-------IDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T +++ VE DL+ +GLIPEF+GR PVL +L L E L+ +LTEPKNAL KQY+++F+
Sbjct: 280 TGEILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDEAALITILTEPKNALVKQYKRLFE 339
Query: 566 MNGQA 570
M A
Sbjct: 340 MENVA 344
>gi|406967035|gb|EKD92236.1| hypothetical protein ACD_29C00105G0003 [uncultured bacterium]
Length = 422
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/305 (54%), Positives = 222/305 (72%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ +PKE+ + L+++V+GQ AKK+LSVAVYNHY R+ + +Q
Sbjct: 63 RLASPKELHEELNQYVVGQHEAKKILSVAVYNHYKRLNHRKTQA---------------- 106
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL KSNIL +GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELSKSNILFIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENIIQKL 166
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +Y+V AQ GI+YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGT+ ++P +
Sbjct: 167 LQKCNYDVEKAQTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGTIASIPPQ 226
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF D++K I +R DS IGF A V+A +
Sbjct: 227 GGRKHPQQEYLQVDTTNILFICGGAFADLDKIIQQRSDDSGIGFSANVQAK-------NK 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ + +M+ VES DL+ YGLIPEFVGR PV+ L L E L+++LT PKNAL KQY+++
Sbjct: 280 IQAADIMKKVESQDLMKYGLIPEFVGRLPVISVLDELDEAALLEILTRPKNALTKQYKQL 339
Query: 564 FQMNG 568
F+ G
Sbjct: 340 FEFEG 344
>gi|126741245|ref|ZP_01756924.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
SK209-2-6]
gi|126717650|gb|EBA14373.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
SK209-2-6]
Length = 422
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 225/302 (74%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+PK+IC+ LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 64 PSPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRL----NHAQKAGSD------------ 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I++R + S++GFGA VR N G
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDNDDRG------- 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT PKNAL KQY+++F+
Sbjct: 281 VGEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTLPKNALVKQYQRLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|399888211|ref|ZP_10774088.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
arbusti SL206]
Length = 448
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/303 (55%), Positives = 223/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++VIGQE AKK L+VAVYNHY RI V ++
Sbjct: 60 LPKPIEIKNYLDQYVIGQEEAKKSLAVAVYNHYKRI-----------------NSNVSNE 102
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL+KSNILL+GPTGSGKTLLA+TLA+++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 103 DIELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLI 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 163 QNADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQI+T ++LFICGGAF ++K I R + SS+GFGA V++
Sbjct: 223 GRKHPHQEFIQINTTNVLFICGGAFDGVDKIIERRTRKSSMGFGADVQSKKEKD------ 276
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L++ + DL+ +GLIPEFVGR P+LV+L AL E L+++L++PKNAL KQY+K+F
Sbjct: 277 -MGILLKDIMPGDLLKFGLIPEFVGRLPILVTLDALDEKALIEILSKPKNALVKQYKKLF 335
Query: 565 QMN 567
QM+
Sbjct: 336 QMD 338
>gi|332708808|ref|ZP_08428779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moorea
producens 3L]
gi|332352350|gb|EGJ31919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moorea
producens 3L]
Length = 448
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 167/305 (54%), Positives = 223/305 (73%), Gaps = 13/305 (4%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI + LD VIGQE AKKVLSVAVYNHY R+ S+ + G+ G+
Sbjct: 77 NQIPKPREIKRYLDDHVIGQEEAKKVLSVAVYNHYKRLSLLQSKAQGQGQ-------GII 129
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD +EL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 130 DDGIELQKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLR 189
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP
Sbjct: 190 LLQVADLDVEEAQRGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKMLEGTIANVPP 249
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV ++K + +R S+GF P +
Sbjct: 250 QGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVVEQRLGKRSMGFIQPGENQSKEKR--- 306
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T+ ++ ++ DL+ +G+IPEF+GR P++ + L E L+ +LTEPKNAL KQY K
Sbjct: 307 ---TADILRHLQPDDLVKFGMIPEFIGRIPMVAVIEPLDEEALMAILTEPKNALVKQYMK 363
Query: 563 MFQMN 567
+ +M+
Sbjct: 364 LLKMD 368
>gi|237730415|ref|ZP_04560896.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. 30_2]
gi|283834243|ref|ZP_06353984.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citrobacter
youngae ATCC 29220]
gi|365104950|ref|ZP_09334342.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Citrobacter
freundii 4_7_47CFAA]
gi|395228095|ref|ZP_10406419.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. A1]
gi|421843722|ref|ZP_16276882.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|424730592|ref|ZP_18159187.1| atp-dependent clp protease atp-binding subunit [Citrobacter sp.
L17]
gi|226905954|gb|EEH91872.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. 30_2]
gi|291069763|gb|EFE07872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citrobacter
youngae ATCC 29220]
gi|363643891|gb|EHL83195.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Citrobacter
freundii 4_7_47CFAA]
gi|394718217|gb|EJF23854.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. A1]
gi|411775443|gb|EKS58889.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|422894785|gb|EKU34592.1| atp-dependent clp protease atp-binding subunit [Citrobacter sp.
L17]
gi|455641802|gb|EMF20973.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii GTC 09479]
Length = 424
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAQ------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|259416323|ref|ZP_05740243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
sp. TrichCH4B]
gi|259347762|gb|EEW59539.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
sp. TrichCH4B]
Length = 395
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/310 (55%), Positives = 226/310 (72%), Gaps = 23/310 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + PTPK+IC LD +VIGQ AK+VLSVAV+NHY R+ + + AG
Sbjct: 56 GMKATDGVPTPKDICDVLDDYVIGQATAKRVLSVAVHNHYKRL----NHAQKAG------ 105
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+ +EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 106 ------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVE 159
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 160 NIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTV 219
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFICGGAF +++ I +R + S++GFGA VR A
Sbjct: 220 ASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIKQRGKGSAMGFGADVRDESDA 279
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
G + +E DL+ +GLIPEFVGR PVL +L L E+ L+ +LT+PKNAL
Sbjct: 280 G-------VGETFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALV 332
Query: 558 KQYRKMFQMN 567
KQY+++F++
Sbjct: 333 KQYQRLFELE 342
>gi|160898087|ref|YP_001563669.1| ATP-dependent protease ATP-binding subunit ClpX [Delftia
acidovorans SPH-1]
gi|333915638|ref|YP_004489370.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Delftia sp.
Cs1-4]
gi|238687212|sp|A9C1U9.1|CLPX_DELAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|160363671|gb|ABX35284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Delftia
acidovorans SPH-1]
gi|333745838|gb|AEF91015.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Delftia sp.
Cs1-4]
Length = 420
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 220/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQ+ K+ L+VAVYNHY R+ + K AG+ D
Sbjct: 64 LPTPAEIKANLDNYVIGQDLPKRTLAVAVYNHYKRLRH----KDKAGK-----------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EIELAKSNILLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGATVKSKKQRS------ 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S + + +E DLI +G+IPE VGR PV+ +L L E+ LVQ+LTEPKNAL KQY K+
Sbjct: 283 -ISEVFQEIEPEDLIKFGIIPELVGRMPVVTALAELGEDALVQILTEPKNALVKQYSKLL 341
Query: 565 QMNG 568
M G
Sbjct: 342 AMEG 345
>gi|270291413|ref|ZP_06197635.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
acidilactici 7_4]
gi|304385126|ref|ZP_07367472.1| ATP-dependent Clp protease ATP-binding subunit [Pediococcus
acidilactici DSM 20284]
gi|270280259|gb|EFA26095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
acidilactici 7_4]
gi|304329320|gb|EFL96540.1| ATP-dependent Clp protease ATP-binding subunit [Pediococcus
acidilactici DSM 20284]
Length = 421
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 220/304 (72%), Gaps = 21/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD++VIGQE AKK LSVAVYNHY RI N+ +Q + DD
Sbjct: 65 IPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRI-NKMAQADAK------------DD 111
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 112 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 171
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V AA+ GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 172 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 231
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + IQI+T +ILFI GGAF IE + R D +IGFG ++
Sbjct: 232 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ SLM+ V DL+ +GLIPEF+GR P+L +L LTE LV++LTEPKNAL KQY+ +
Sbjct: 285 -SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNALVKQYKALL 343
Query: 565 QMNG 568
++G
Sbjct: 344 ALDG 347
>gi|315499704|ref|YP_004088507.1| ATP-dependent clp protease, ATP-binding subunit clpx [Asticcacaulis
excentricus CB 48]
gi|315417716|gb|ADU14356.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
excentricus CB 48]
Length = 419
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 224/304 (73%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEI + LD +VIGQ +AKKVLSVAV+NHY R+ + + +
Sbjct: 64 PTPKEIREVLDDYVIGQAQAKKVLSVAVHNHYKRLNHAAK-----------------GND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR--ANMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGFGA V+ R G V
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGKGTSIGFGATVKDPEERRLGEV--- 283
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ VE DL+ +GLIPEF+GR PVL +L L E LV++LTEPKNAL KQY ++
Sbjct: 284 ------LHQVEPDDLMKFGLIPEFIGRLPVLATLEDLDEATLVKILTEPKNALVKQYARL 337
Query: 564 FQMN 567
F+M
Sbjct: 338 FEME 341
>gi|227328850|ref|ZP_03832874.1| ATP-dependent protease ATP-binding subunit ClpX [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 424
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 225/306 (73%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS--SIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I E+R D+ IGF A V+ G D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK------GSAD 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+
Sbjct: 280 KATEGELLSNVEPGDLIKFGLIPEFIGRLPVVATLRELSEDALIQILREPKNALTKQYQA 339
Query: 563 MFQMNG 568
+F + G
Sbjct: 340 LFNLEG 345
>gi|374335522|ref|YP_005092209.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanimonas sp.
GK1]
gi|372985209|gb|AEY01459.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanimonas sp.
GK1]
Length = 426
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/308 (56%), Positives = 225/308 (73%), Gaps = 26/308 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+ PTP EI LD +VIGQ+ AKKVL+VAVYNHY R+ N +S TDGV
Sbjct: 63 GDALPTPHEIRAHLDDYVIGQDHAKKVLAVAVYNHYKRLRNATS------------TDGV 110
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 111 -----ELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD--SSIGFGAPVRANMRAGG 499
+G RKHP+ + +Q+DT ILFICGGAF ++K + E+R D + IGFGA V+A +
Sbjct: 226 PQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVV-EQRMDHGTGIGFGAEVKARDQKAS 284
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQ 559
+ S + VE DL+ YGLIPEF+GR PV+ +L L E+ LVQ+L+EPKNAL KQ
Sbjct: 285 L------SEIFTRVEPEDLVKYGLIPEFIGRLPVVATLTELDEDALVQILSEPKNALTKQ 338
Query: 560 YRKMFQMN 567
Y +F +
Sbjct: 339 YAALFALE 346
>gi|418069409|ref|ZP_12706687.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
acidilactici MA18/5M]
gi|357536878|gb|EHJ20906.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
acidilactici MA18/5M]
Length = 418
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 220/304 (72%), Gaps = 21/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD++VIGQE AKK LSVAVYNHY RI N+ +Q + DD
Sbjct: 62 IPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRI-NKMAQADAK------------DD 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 109 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V AA+ GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 169 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + IQI+T +ILFI GGAF IE + R D +IGFG ++
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 281
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ SLM+ V DL+ +GLIPEF+GR P+L +L LTE LV++LTEPKNAL KQY+ +
Sbjct: 282 -SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNALVKQYKALL 340
Query: 565 QMNG 568
++G
Sbjct: 341 ALDG 344
>gi|167646808|ref|YP_001684471.1| ATP-dependent protease ATP-binding subunit ClpX [Caulobacter sp.
K31]
gi|399090708|ref|ZP_10754132.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Caulobacter
sp. AP07]
gi|189082487|sp|B0SZ62.1|CLPX_CAUSK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167349238|gb|ABZ71973.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
sp. K31]
gi|398027514|gb|EJL21063.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Caulobacter
sp. AP07]
Length = 420
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 222/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC+ LD +VIGQ AKKVL+VAV+NHY R+ + S ++
Sbjct: 64 PTPREICEVLDDYVIGQNHAKKVLAVAVHNHYKRLNHASK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R Q SIGFGA V +
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGQGKSIGFGAKV-------ADPEERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL +GLIPEF+GR PV+ +L L E LV++LTEPKNA KQY+++F+
Sbjct: 280 TGEILRGVEPDDLQRFGLIPEFIGRLPVIATLEDLDEAALVKILTEPKNAFVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|359428059|ref|ZP_09219101.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
sp. NBRC 100985]
gi|358236510|dbj|GAB00640.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
sp. NBRC 100985]
Length = 436
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 224/314 (71%), Gaps = 24/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWATKPL----PKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ +E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 QHGNPE------IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 154
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 155 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 214
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 215 EGTVASIPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKN 274
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
D+ S L VE++DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 275 K------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPK 328
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 329 NALTRQYQYLFSME 342
>gi|238026974|ref|YP_002911205.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
glumae BGR1]
gi|237876168|gb|ACR28501.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
glumae BGR1]
Length = 423
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 222/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI + LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 66 LPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERD------ 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ ++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY+K+F
Sbjct: 283 -SGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLF 341
Query: 565 QMN 567
M
Sbjct: 342 AME 344
>gi|116251455|ref|YP_767293.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. viciae 3841]
gi|241204074|ref|YP_002975170.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|424874765|ref|ZP_18298427.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|424881044|ref|ZP_18304676.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WU95]
gi|166214809|sp|Q1MIM6.1|CLPX_RHIL3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|115256103|emb|CAK07184.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhizobium leguminosarum bv. viciae 3841]
gi|240857964|gb|ACS55631.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|392517407|gb|EIW42139.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WU95]
gi|393170466|gb|EJC70513.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 425
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S GE
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASKN----GE------------- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V++ D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGASVKSQ-------DDRR 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 283 VGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|262198159|ref|YP_003269368.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haliangium
ochraceum DSM 14365]
gi|262081506|gb|ACY17475.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haliangium
ochraceum DSM 14365]
Length = 422
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/317 (53%), Positives = 232/317 (73%), Gaps = 26/317 (8%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
+D +G + + P P+ I K LD++VIGQERAKK+L+VAV+NHY RI +++
Sbjct: 55 EDQAYGTATI----PKPQHIKKILDEYVIGQERAKKILAVAVHNHYKRIDHKA------- 103
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
G D++ VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGY
Sbjct: 104 --------GDDEEEVELQKSNILLLGPTGSGKTLLAQTLARILNVPFAIADATNLTEAGY 155
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
VGEDVE+I+ LL +D+++ AQ+GIVYIDE+DKI +K+++ +I+RDVSGEGVQQALLK
Sbjct: 156 VGEDVENIIVSLLQNADHDIERAQRGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLK 215
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV 491
++EGT+ VP KG RKHP+ + +Q+DT +ILFICGGAF +E+ I R IGFGA +
Sbjct: 216 IIEGTLAAVPPKGGRKHPQQEFLQVDTSNILFICGGAFTGLEEIIENRIGQRMIGFGATM 275
Query: 492 RANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTE 551
+ A+ L++ V+ DL+ YG+IPEFVGR P++ L L+E+ LVQ+LT+
Sbjct: 276 KPK-------KALDRWELIKEVQPEDLLKYGMIPEFVGRLPMIAPLHELSEDALVQILTQ 328
Query: 552 PKNALGKQYRKMFQMNG 568
PKNAL KQY+K+F+M+G
Sbjct: 329 PKNALIKQYQKLFEMDG 345
>gi|359785394|ref|ZP_09288546.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
GFAJ-1]
gi|359297323|gb|EHK61559.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
GFAJ-1]
Length = 425
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 222/305 (72%), Gaps = 23/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTP+EI LD +VIGQ+RAK VLSVAVYNHY R+ + V
Sbjct: 63 ERLPTPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRLKAD-----------------VR 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 DGDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP
Sbjct: 166 LLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q++T +ILFI GGAF ++K I +R + IGF A V++ + GV
Sbjct: 226 QGGRKHPQQEFVQVNTGNILFIVGGAFAGLDKVIRDRAEKGGIGFNASVKSKESSRGV-- 283
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DL+ +GLIPEFVGR PV+ +L LTE+ LVQ+LTEPKN+L KQY K
Sbjct: 284 ----GELLADVEPEDLVKFGLIPEFVGRLPVIATLTELTEDALVQILTEPKNSLVKQYAK 339
Query: 563 MFQMN 567
+F+M
Sbjct: 340 LFEME 344
>gi|428312432|ref|YP_007123409.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microcoleus
sp. PCC 7113]
gi|428254044|gb|AFZ20003.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microcoleus
sp. PCC 7113]
Length = 446
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 224/306 (73%), Gaps = 17/306 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI-YNESSQKRSAGESSSCTTDGV 321
N+ P P+E+ K LD+ VIGQ+ AKKVLSVAVYNHY R+ + +S AG
Sbjct: 77 NQIPKPRELKKYLDEHVIGQDDAKKVLSVAVYNHYKRLSFIQSKGNGKAGL--------- 127
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL+KSNILLMGPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGEDVE+IL
Sbjct: 128 -EDVVELQKSNILLMGPTGCGKTLLAQTLASVLDVPFAVADATTLTEAGYVGEDVENILL 186
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
+LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 187 RLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP 246
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP D IQIDT +ILFICGGAFV +EK + +R SIGF P G +
Sbjct: 247 PQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRIGKRSIGFIQP------GEGQS 300
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
T+ ++ +E DL+ +G+IPEF+GR PV+ + L E L+++LTEP+NAL KQY+
Sbjct: 301 KEKRTADVLRHLEPDDLVKFGMIPEFIGRVPVVAVVDPLDEEALMEILTEPRNALVKQYQ 360
Query: 562 KMFQMN 567
K+ +M+
Sbjct: 361 KLLKMD 366
>gi|365093544|ref|ZP_09330609.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
NO-1]
gi|363414424|gb|EHL21574.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
NO-1]
Length = 421
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 218/304 (71%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQ+ AK+ L+VAVYNHY R+ ++ D D
Sbjct: 65 LPTPAEIKTNLDNYVIGQDVAKRTLAVAVYNHYKRLRHK---------------DKAHKD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + +E DLI +GLIPE VGR PV+ +L L+E+ LVQ+LTEPKNAL KQY K+
Sbjct: 284 -LTEVFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|427439827|ref|ZP_18924391.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus lolii
NGRI 0510Q]
gi|425787959|dbj|GAC45179.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus lolii
NGRI 0510Q]
Length = 418
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 220/304 (72%), Gaps = 21/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD++VIGQE AKK LSVAVYNHY RI N+ +Q + DD
Sbjct: 62 IPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRI-NKMAQADAK------------DD 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 109 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V AA+ GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 169 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + IQI+T +ILFI GGAF IE + R D +IGFG ++
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 281
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ SLM+ V DL+ +GLIPEF+GR P+L +L LTE LV++LTEPKNAL KQY+ +
Sbjct: 282 -SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNALVKQYKALL 340
Query: 565 QMNG 568
++G
Sbjct: 341 ALDG 344
>gi|365835460|ref|ZP_09376879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hafnia alvei
ATCC 51873]
gi|364566035|gb|EHM43739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hafnia alvei
ATCC 51873]
Length = 423
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/307 (55%), Positives = 225/307 (73%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S
Sbjct: 62 NALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS-------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -NGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP
Sbjct: 165 LLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA V+A ++
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGTGIGFGATVKA------LS 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+
Sbjct: 279 EKATEGELLAQAEPEDLIKFGLIPEFIGRLPVVATLRELSEDALIQILKEPKNALTKQYQ 338
Query: 562 KMFQMNG 568
+F + G
Sbjct: 339 ALFNLEG 345
>gi|398378315|ref|ZP_10536479.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. AP16]
gi|397725069|gb|EJK85525.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. AP16]
Length = 425
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S +
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASK-----------------NGD 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+ G D V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGAAVK------GPDDRRV 283
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L E +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++F+
Sbjct: 284 GEVLRE-LEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFE 342
Query: 566 MN 567
M
Sbjct: 343 ME 344
>gi|83589393|ref|YP_429402.1| ATP-dependent protease ATP-binding subunit ClpX [Moorella
thermoacetica ATCC 39073]
gi|123524974|sp|Q2RL30.1|CLPX_MOOTA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83572307|gb|ABC18859.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moorella
thermoacetica ATCC 39073]
Length = 419
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 225/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P PKEI + LD++VI Q++AKK L+VAVYNHY RI G+
Sbjct: 60 ELPKPKEIREILDQYVISQDQAKKALAVAVYNHYKRI-----------------NLGMKM 102
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNI+++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 103 DDVELQKSNIIMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKL 162
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY+V A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct: 163 IQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQ 222
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQ+DT +ILFICGGAF ++K I R ++GFGA +R +
Sbjct: 223 GGRKHPHQEFIQLDTTNILFICGGAFDGLDKIIKNRISQKTMGFGAEIRGK-------ND 275
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V +++ V DL+ YGLIPEFVGR PV+V+L AL E L++VLTEP+NAL KQY+K+
Sbjct: 276 VQVGDILKQVLPVDLLKYGLIPEFVGRLPVIVTLDALDETALIRVLTEPRNALVKQYQKL 335
Query: 564 FQMNG 568
F+M+G
Sbjct: 336 FEMDG 340
>gi|317492908|ref|ZP_07951332.1| ATP-dependent Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919030|gb|EFV40365.1| ATP-dependent Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 423
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/307 (55%), Positives = 225/307 (73%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S
Sbjct: 62 NALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS-------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -NGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP
Sbjct: 165 LLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA V+A ++
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGTGIGFGATVKA------LS 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+
Sbjct: 279 EKATEGELLAQAEPEDLIKFGLIPEFIGRLPVVATLRELSEDALIQILKEPKNALTKQYQ 338
Query: 562 KMFQMNG 568
+F + G
Sbjct: 339 ALFNLEG 345
>gi|423118964|ref|ZP_17106648.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5246]
gi|376399610|gb|EHT12224.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5246]
Length = 424
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|432703010|ref|ZP_19938136.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE171]
gi|431247141|gb|ELF41383.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE171]
Length = 424
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF + K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLNKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|198283160|ref|YP_002219481.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666382|ref|YP_002425389.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|226706572|sp|B7J791.1|CLPX_ACIF2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706573|sp|B5EQ29.1|CLPX_ACIF5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|198247681|gb|ACH83274.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518595|gb|ACK79181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 423
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 224/310 (72%), Gaps = 23/310 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
S +K P P EI K LD +VIGQ+ AKKVLSVAVYNHY R+ +
Sbjct: 57 SEAQDKLPKPMEIRKTLDDYVIGQDVAKKVLSVAVYNHYKRLEH---------------- 100
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
G D+ VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+
Sbjct: 101 -GGKDNEVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVEN 159
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL DY+V AQ GIVYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 160 IIQKLLQKCDYDVEKAQTGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTVA 219
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP+ + +Q+DT+ ILFICGGAF +EK++S R + +GF AP++ +
Sbjct: 220 SVPPQGGRKHPQQEFLQVDTRHILFICGGAFAGLEKSVSARLEKGGMGFNAPLKRRDKEA 279
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+ LM+ +E DL+ YGLIPEFVGR P+L L L E L+ +LT+PKNAL K
Sbjct: 280 ------TAAMLMQNLEPEDLVRYGLIPEFVGRLPILALLEELDEEALISILTDPKNALVK 333
Query: 559 QYRKMFQMNG 568
QY+K+F + G
Sbjct: 334 QYQKLFALEG 343
>gi|91228616|ref|ZP_01262534.1| ATP-dependent protease ATP-binding subunit [Vibrio alginolyticus
12G01]
gi|269965579|ref|ZP_06179693.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
alginolyticus 40B]
gi|91187848|gb|EAS74162.1| ATP-dependent protease ATP-binding subunit [Vibrio alginolyticus
12G01]
gi|269829804|gb|EEZ84039.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
alginolyticus 40B]
Length = 426
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 226/310 (72%), Gaps = 24/310 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ + V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNESKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQM-NGQAAF 572
F++ N + F
Sbjct: 343 FELENAELEF 352
>gi|406038260|ref|ZP_11045615.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 436
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 225/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P+EI K LD++VIGQ+ AKK LSVAVYNHY R+ G+S
Sbjct: 53 GDWASREL----PKPQEIRKALDQYVIGQDIAKKTLSVAVYNHYKRL--------KVGQS 100
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+ +E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 101 GHKA-----NQDIEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R++ IGF A V+
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKN 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + + L VE +DL+ +GLIPEF+GR PV+ +L L E L+Q+LTEPK
Sbjct: 276 KDESKKL------AELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEAALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 330 NALTRQYQYLFNME 343
>gi|262394814|ref|YP_003286668.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
Ex25]
gi|451970182|ref|ZP_21923409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
alginolyticus E0666]
gi|262338408|gb|ACY52203.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
Ex25]
gi|451933696|gb|EMD81363.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
alginolyticus E0666]
Length = 426
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 226/310 (72%), Gaps = 24/310 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ + V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNESKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQM-NGQAAF 572
F++ N + F
Sbjct: 343 FELENAELEF 352
>gi|85058650|ref|YP_454352.1| ATP-dependent protease ATP-binding subunit ClpX [Sodalis
glossinidius str. 'morsitans']
gi|123519920|sp|Q2NV78.1|CLPX_SODGM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|84779170|dbj|BAE73947.1| ATP-dependent Clp protease ATP-binding subunit [Sodalis
glossinidius str. 'morsitans']
Length = 424
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G ++
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRN-----------------GDTNN 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + + IGF A V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRTETNRGIGFSATVK------GSSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 VTKGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILHEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|381158610|ref|ZP_09867843.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thiorhodovibrio sp. 970]
gi|380879968|gb|EIC22059.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thiorhodovibrio sp. 970]
Length = 426
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 173/307 (56%), Positives = 221/307 (71%), Gaps = 23/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P P+EI LD++VIGQE AKKVLSVAVYNHY R+ + S G+
Sbjct: 62 ASKLPKPREINDSLDQYVIGQEHAKKVLSVAVYNHYKRM------ELSGGK--------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VE+ KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DEVEIAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFI GGAF +++ I R + IGF A V +
Sbjct: 225 PQGGRKHPQQEFLQVDTSSILFIVGGAFAGLDRIIRTRSKKGGIGFSAEVHSQ------D 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D + L+ VE DLI YGLIPEFVGR PV+ +L L E LV++LTEPK++L +QY+
Sbjct: 279 DDKQMTELLSAVEPEDLIRYGLIPEFVGRLPVMATLEELDEEALVRILTEPKHSLYRQYK 338
Query: 562 KMFQMNG 568
++F+M G
Sbjct: 339 RLFEMEG 345
>gi|395006779|ref|ZP_10390580.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Acidovorax
sp. CF316]
gi|394315233|gb|EJE52049.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Acidovorax
sp. CF316]
Length = 421
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 219/304 (72%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQ++AK+ L+VAVYNHY R+ ++ D D
Sbjct: 65 LPTPLEIKTNLDNYVIGQDQAKRTLAVAVYNHYKRLRHK---------------DKAHKD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DIELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + +E DLI +G+IPE VGR PV+ +L L+E+ LVQ+LTEPKNAL KQY K+
Sbjct: 284 -LTEVFTEIEPEDLIKFGIIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|438047873|ref|ZP_20856089.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-5646]
gi|435319477|gb|ELO92304.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-5646]
Length = 419
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|332532269|ref|ZP_08408150.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas haloplanktis ANT/505]
gi|359434421|ref|ZP_09224686.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20652]
gi|359440401|ref|ZP_09230321.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20429]
gi|392534092|ref|ZP_10281229.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
arctica A 37-1-2]
gi|332038367|gb|EGI74812.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas haloplanktis ANT/505]
gi|357918929|dbj|GAA60935.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20652]
gi|358037714|dbj|GAA66570.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20429]
Length = 427
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/312 (55%), Positives = 227/312 (72%), Gaps = 30/312 (9%)
Query: 260 NLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTD 319
+ +K P PKEI K LD +VIGQ+ AKKVLSVAVYNHY R+ N+S+++
Sbjct: 62 DTSDKLPVPKEIRKHLDDYVIGQDHAKKVLSVAVYNHYKRLRNQSTKQ------------ 109
Query: 320 GVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 110 -----DIELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENI 164
Query: 380 LYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +
Sbjct: 165 IQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 224
Query: 440 VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAG 498
VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFG V+
Sbjct: 225 VPPQGGRKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRSHKNTGIGFGVSVK------ 278
Query: 499 GVTDAVVTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
++ + SL ET VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNA
Sbjct: 279 ---ESAASRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALVQILSEPKNA 335
Query: 556 LGKQYRKMFQMN 567
+ KQ+ +F M
Sbjct: 336 ITKQFSVLFGME 347
>gi|297616503|ref|YP_003701662.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophothermus lipocalidus DSM 12680]
gi|297144340|gb|ADI01097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Syntrophothermus lipocalidus DSM 12680]
Length = 417
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/311 (54%), Positives = 225/311 (72%), Gaps = 25/311 (8%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G +G+ P P+EI LD++VIGQE+AKK+L+VAVYNHY RI
Sbjct: 56 GFEMGD-IPKPQEIKDILDQYVIGQEKAKKILAVAVYNHYKRI----------------- 97
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
G D VEL+KSNIL++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE
Sbjct: 98 NLGTKLDDVELQKSNILMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVE 157
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+IL KL+ +DY++ A++GIVYIDE+DKI +K ++ +I+RDVSGEGVQQALLK+LEGT+
Sbjct: 158 NILLKLIQAADYDIEKAEKGIVYIDEIDKIARKTDNPSITRDVSGEGVQQALLKILEGTI 217
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP + IQIDT +ILFICGGAF I+K I R S+GFGA ++
Sbjct: 218 ASVPPQGGRKHPHQEFIQIDTSNILFICGGAFEGIDKIIQNRVGQKSMGFGADIKTKKEK 277
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
++E + DL+ +GLIPEFVGR P++V+L AL E+ LV++LTEPKNAL
Sbjct: 278 K-------IGEILEQILPQDLLKFGLIPEFVGRVPIIVTLDALDESALVRILTEPKNALV 330
Query: 558 KQYRKMFQMNG 568
+QY+K+F M+G
Sbjct: 331 RQYQKLFDMDG 341
>gi|23014985|ref|ZP_00054777.1| COG1219: ATP-dependent protease Clp, ATPase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 422
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 224/302 (74%), Gaps = 23/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC+ LD +VIGQ AKKVLSVAV+NHY R+ + G +++
Sbjct: 64 PTPKDICQVLDDYVIGQGHAKKVLSVAVHNHYKRLQH----------------GGKNNNE 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
++YNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 168 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I R + +SIGFGA VR D
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGSRGRGTSIGFGADVRG-------PDERR 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PVL +L L + L+ +L++PKNAL KQY+++F+
Sbjct: 281 TGEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFE 340
Query: 566 MN 567
M
Sbjct: 341 ME 342
>gi|336124547|ref|YP_004566595.1| ClpX [Vibrio anguillarum 775]
gi|335342270|gb|AEH33553.1| ClpX [Vibrio anguillarum 775]
Length = 426
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 220/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP +I + LD +VIGQE AKKVL+VAVYNHY R+ N G+ +S D
Sbjct: 65 LPTPHKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDKTS--------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGFGA VR+ +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGSGIGFGAEVRSK------DET 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTIGELFNQVEPEDLVKYGLIPEFIGRLPVTATLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|381150406|ref|ZP_09862275.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Methylomicrobium album BG8]
gi|380882378|gb|EIC28255.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Methylomicrobium album BG8]
Length = 424
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/304 (55%), Positives = 221/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI K LD +VIGQERAKK+L+VAVYNHY R+ N++ + D
Sbjct: 65 LPKPKEIKKELDAYVIGQERAKKILAVAVYNHYKRLRNKTRK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+E+ KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K+L
Sbjct: 108 GIEIGKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIILKIL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V A+ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QKCDYDVEKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q++T +ILFI GGAF +++ I R + IGF A V++ V
Sbjct: 228 GRKHPQQEFLQVNTANILFIVGGAFAGLDRVIKARSEKGGIGFSADVKSKEETKNV---- 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ VE+ DLI YGLIPEFVGR PV+ +L L E+ LVQ+LTEPKNAL KQY+ +F
Sbjct: 284 --GQVFSEVEAEDLIKYGLIPEFVGRLPVVATLEELDEDALVQILTEPKNALVKQYQHLF 341
Query: 565 QMNG 568
+M G
Sbjct: 342 EMEG 345
>gi|301049645|ref|ZP_07196594.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 185-1]
gi|300298582|gb|EFJ54967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 185-1]
Length = 424
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISYRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|330817270|ref|YP_004360975.1| ATP-dependent protease ATP-binding subunit [Burkholderia gladioli
BSR3]
gi|327369663|gb|AEA61019.1| ATP-dependent protease ATP-binding subunit [Burkholderia gladioli
BSR3]
Length = 423
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 222/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI + LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 66 LPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGASVKSKQERD------ 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ ++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY+K+F
Sbjct: 283 -SGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLF 341
Query: 565 QMN 567
M
Sbjct: 342 AME 344
>gi|83943112|ref|ZP_00955572.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
EE-36]
gi|83954270|ref|ZP_00962990.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
NAS-14.1]
gi|83841307|gb|EAP80477.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
NAS-14.1]
gi|83846120|gb|EAP83997.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
EE-36]
Length = 421
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 223/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC LD +VIGQ AK+VLSVAV+NHY R+ + + G+
Sbjct: 64 PTPKDICDVLDDYVIGQAMAKRVLSVAVHNHYKRL----NHAQKGGD------------- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I+ R + S++GFGA VR DA
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAARGKGSAMGFGADVRDQ-------DARG 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ LV +LTEPKNAL KQY+++F+
Sbjct: 280 IGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTEPKNALVKQYQRLFE 339
Query: 566 MN 567
+
Sbjct: 340 IE 341
>gi|392548929|ref|ZP_10296066.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
rubra ATCC 29570]
Length = 427
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 173/307 (56%), Positives = 224/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P P+EI LD +VIGQE AKKVLSVAVYNHY R+ N+ G+
Sbjct: 65 DKLPVPREIRNHLDDYVIGQEHAKKVLSVAVYNHYKRLKNQ----------------GLK 108
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 GD-VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R ++ IGFGA V+++ +
Sbjct: 228 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSHTNTGIGFGAQVKSSDSERSL- 286
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S + VE DL+ YGLIPEF+GR PV+ +L L E+ L+Q+L EPKNAL KQY
Sbjct: 287 -----SETFKDVEPEDLVKYGLIPEFIGRLPVVATLAELDEDALIQILNEPKNALTKQYG 341
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 342 ALFKMEG 348
>gi|357419905|ref|YP_004932897.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermovirga
lienii DSM 17291]
gi|355397371|gb|AER66800.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovirga
lienii DSM 17291]
Length = 441
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 218/308 (70%), Gaps = 23/308 (7%)
Query: 261 LGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDG 320
+G P P EI K LD++VIGQE AKKVL+VAVYNHY RIY D
Sbjct: 78 VGTNLPKPTEIKKFLDQYVIGQEYAKKVLAVAVYNHYKRIYE---------------FDR 122
Query: 321 VDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESIL 380
+DD VE+ KSN+LL+GPTG GKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 123 SEDDEVEMAKSNVLLIGPTGCGKTLLAETLARMLEVPFAIADATTLTEAGYVGEDVENIL 182
Query: 381 YKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNV 440
+LL +DY+VA A++GI+YIDE+DKI++K++S++I+RDVSGEGVQQALL+++EGTV NV
Sbjct: 183 VRLLQAADYDVALAERGIIYIDEIDKISRKSQSVSITRDVSGEGVQQALLRIIEGTVANV 242
Query: 441 PEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGV 500
P KG RKHP D IQ++TK+ILFICGGAF +E+ + R IGFG +
Sbjct: 243 PPKGGRKHPHQDFIQVNTKNILFICGGAFDGLEEIVERRLNKKIIGFGGKL--------A 294
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
++ + ++ V DL+ YG IPEFVGR PV+ + AL LV++L EPKNAL KQY
Sbjct: 295 SEDLDARKILRHVIPEDLLVYGFIPEFVGRLPVIAPMDALDTEDLVKILVEPKNALIKQY 354
Query: 561 RKMFQMNG 568
+K F + G
Sbjct: 355 KKAFSLEG 362
>gi|283784264|ref|YP_003364129.1| ATP-dependent Clp protease ATP-binding subunit [Citrobacter
rodentium ICC168]
gi|282947718|emb|CBG87273.1| ATP-dependent Clp protease ATP-binding subunit [Citrobacter
rodentium ICC168]
Length = 424
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|157146945|ref|YP_001454264.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter koseri
ATCC BAA-895]
gi|166214770|sp|A8AK15.1|CLPX_CITK8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157084150|gb|ABV13828.1| hypothetical protein CKO_02722 [Citrobacter koseri ATCC BAA-895]
Length = 424
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|16763830|ref|NP_459445.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|56414395|ref|YP_151470.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62179061|ref|YP_215478.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161615357|ref|YP_001589321.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167990433|ref|ZP_02571533.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168231438|ref|ZP_02656496.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168237564|ref|ZP_02662622.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168261114|ref|ZP_02683087.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168465543|ref|ZP_02699425.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|168818939|ref|ZP_02830939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|194445635|ref|YP_002039692.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194451482|ref|YP_002044484.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194471272|ref|ZP_03077256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194734820|ref|YP_002113480.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197250772|ref|YP_002145430.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197263118|ref|ZP_03163192.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197363315|ref|YP_002142952.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|198242558|ref|YP_002214403.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390026|ref|ZP_03216637.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205351760|ref|YP_002225561.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|224582287|ref|YP_002636085.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|238911420|ref|ZP_04655257.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|374978475|ref|ZP_09719817.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|375000177|ref|ZP_09724517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|375113376|ref|ZP_09758546.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|375117885|ref|ZP_09763052.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|375122545|ref|ZP_09767709.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|378443953|ref|YP_005231585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378448787|ref|YP_005236146.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378698412|ref|YP_005180369.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|378983054|ref|YP_005246209.1| ATP-dependent Clp protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378987851|ref|YP_005251015.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379699670|ref|YP_005241398.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|383495257|ref|YP_005395946.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|386590382|ref|YP_006086782.1| ATP-dependent Clp protease ATP-binding ClpX [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|409248895|ref|YP_006884733.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|416424705|ref|ZP_11691886.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416432830|ref|ZP_11696435.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416440100|ref|ZP_11700681.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416444541|ref|ZP_11703774.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416453747|ref|ZP_11709821.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458587|ref|ZP_11713106.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416465623|ref|ZP_11716945.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416473281|ref|ZP_11719748.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416484369|ref|ZP_11724165.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416501556|ref|ZP_11732146.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416510474|ref|ZP_11737072.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416520601|ref|ZP_11740313.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416526652|ref|ZP_11742557.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416536138|ref|ZP_11748205.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416542340|ref|ZP_11751510.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416552362|ref|ZP_11757078.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416557283|ref|ZP_11759412.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416573529|ref|ZP_11767875.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416576688|ref|ZP_11769270.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583720|ref|ZP_11773476.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416595068|ref|ZP_11780882.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416596607|ref|ZP_11781499.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416605756|ref|ZP_11787188.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416614719|ref|ZP_11792971.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416623398|ref|ZP_11797373.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416634044|ref|ZP_11802325.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416639006|ref|ZP_11804305.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416648502|ref|ZP_11809147.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416653402|ref|ZP_11811846.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416670922|ref|ZP_11820411.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416673585|ref|ZP_11820908.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416691333|ref|ZP_11826155.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416706819|ref|ZP_11832008.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416713233|ref|ZP_11836875.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416719436|ref|ZP_11841292.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416723572|ref|ZP_11844238.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734154|ref|ZP_11850809.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416740074|ref|ZP_11854162.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416745271|ref|ZP_11857203.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416757172|ref|ZP_11863002.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416764386|ref|ZP_11867990.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416766795|ref|ZP_11869411.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|417324523|ref|ZP_12110765.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|417339755|ref|ZP_12121241.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|417356091|ref|ZP_12131736.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417379166|ref|ZP_12147615.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|417388735|ref|ZP_12152776.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|417406176|ref|ZP_12157836.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|417451306|ref|ZP_12163047.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|417504470|ref|ZP_12174141.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|417516427|ref|ZP_12179333.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|417525810|ref|ZP_12184554.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|417537134|ref|ZP_12190098.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|418485273|ref|ZP_13054257.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418490799|ref|ZP_13057335.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418493156|ref|ZP_13059624.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418498100|ref|ZP_13064515.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418504394|ref|ZP_13070752.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418507975|ref|ZP_13074283.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418511865|ref|ZP_13078113.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|418525615|ref|ZP_13091595.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|418763193|ref|ZP_13319317.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418766727|ref|ZP_13322799.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418771898|ref|ZP_13327904.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418774851|ref|ZP_13330812.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418781196|ref|ZP_13337081.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418784658|ref|ZP_13340495.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418791370|ref|ZP_13347133.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418793870|ref|ZP_13349596.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418799552|ref|ZP_13355218.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|418804742|ref|ZP_13360346.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418807602|ref|ZP_13363160.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418812140|ref|ZP_13367664.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418815499|ref|ZP_13371000.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418821320|ref|ZP_13376745.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418831777|ref|ZP_13386727.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835779|ref|ZP_13390670.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418838763|ref|ZP_13393605.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418844393|ref|ZP_13399185.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418848965|ref|ZP_13403700.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418853325|ref|ZP_13408018.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418860807|ref|ZP_13415382.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418864290|ref|ZP_13418825.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418866313|ref|ZP_13420776.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419727609|ref|ZP_14254577.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419733912|ref|ZP_14260807.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419738878|ref|ZP_14265634.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419743019|ref|ZP_14269687.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749565|ref|ZP_14276044.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|419788920|ref|ZP_14314603.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419793962|ref|ZP_14319578.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|421357761|ref|ZP_15808069.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|421365244|ref|ZP_15815466.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421368980|ref|ZP_15819164.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421372428|ref|ZP_15822577.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421376039|ref|ZP_15826148.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|421380609|ref|ZP_15830671.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|421383973|ref|ZP_15834002.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|421392474|ref|ZP_15842431.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|421396009|ref|ZP_15845941.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|421398668|ref|ZP_15848573.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|421405150|ref|ZP_15854985.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|421407750|ref|ZP_15857557.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|421412092|ref|ZP_15861855.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421419439|ref|ZP_15869131.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|421423884|ref|ZP_15873535.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|421425638|ref|ZP_15875273.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|421429986|ref|ZP_15879580.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|421436813|ref|ZP_15886339.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|421439186|ref|ZP_15888677.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421445861|ref|ZP_15895282.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|421451187|ref|ZP_15900553.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|421572545|ref|ZP_16018191.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|421577454|ref|ZP_16023042.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|421582043|ref|ZP_16027584.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|421584558|ref|ZP_16030066.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|421884327|ref|ZP_16315542.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|422024584|ref|ZP_16371061.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|422029607|ref|ZP_16375863.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|427545786|ref|ZP_18926372.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|427562134|ref|ZP_18931137.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|427580637|ref|ZP_18935959.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|427602845|ref|ZP_18940735.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|427627513|ref|ZP_18945645.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|427650794|ref|ZP_18950401.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|427659814|ref|ZP_18955355.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|427664927|ref|ZP_18960101.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|427698522|ref|ZP_18965035.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|436615596|ref|ZP_20514265.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436810602|ref|ZP_20529640.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|436813650|ref|ZP_20531838.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|436831374|ref|ZP_20536042.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436849786|ref|ZP_20540923.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436856199|ref|ZP_20545304.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436863184|ref|ZP_20549727.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436871660|ref|ZP_20554834.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878811|ref|ZP_20559230.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|436886926|ref|ZP_20563332.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436894407|ref|ZP_20567885.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436904533|ref|ZP_20574550.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436909990|ref|ZP_20576575.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|436918243|ref|ZP_20581414.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436925536|ref|ZP_20585968.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436934283|ref|ZP_20590287.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436941289|ref|ZP_20594849.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|436949279|ref|ZP_20599293.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436959669|ref|ZP_20603866.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436975114|ref|ZP_20611390.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436987195|ref|ZP_20615839.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436999732|ref|ZP_20620305.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437010050|ref|ZP_20624030.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|437018153|ref|ZP_20626645.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|437035562|ref|ZP_20633488.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437046588|ref|ZP_20638404.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437049339|ref|ZP_20639959.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437056847|ref|ZP_20644215.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|437065299|ref|ZP_20648984.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|437078921|ref|ZP_20656415.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|437081945|ref|ZP_20658020.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|437089969|ref|ZP_20662541.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|437117165|ref|ZP_20669785.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|437122540|ref|ZP_20672382.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437132641|ref|ZP_20678091.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437137748|ref|ZP_20680543.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|437149061|ref|ZP_20687934.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|437151980|ref|ZP_20689651.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|437160928|ref|ZP_20695001.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437172785|ref|ZP_20701308.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|437176840|ref|ZP_20703644.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|437188249|ref|ZP_20710253.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|437238183|ref|ZP_20714100.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
gi|437259710|ref|ZP_20717230.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|437272721|ref|ZP_20724471.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|437274739|ref|ZP_20725431.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|437288359|ref|ZP_20730693.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|437307006|ref|ZP_20734648.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|437353360|ref|ZP_20747851.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22558]
gi|437404297|ref|ZP_20752073.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|437456276|ref|ZP_20760395.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|437470001|ref|ZP_20765016.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|437485280|ref|ZP_20769392.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|437499043|ref|ZP_20773852.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|437513522|ref|ZP_20777500.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|437531376|ref|ZP_20780746.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|437554752|ref|ZP_20784524.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437571698|ref|ZP_20788807.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437595755|ref|ZP_20796008.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|437602361|ref|ZP_20798368.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437625361|ref|ZP_20805446.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437632903|ref|ZP_20806596.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437658473|ref|ZP_20811680.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437672065|ref|ZP_20816064.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|437694787|ref|ZP_20821862.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|437710352|ref|ZP_20826457.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|437726123|ref|ZP_20829928.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437811613|ref|ZP_20841205.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|437833274|ref|ZP_20844622.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
gi|438091448|ref|ZP_20860959.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|438105779|ref|ZP_20866397.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|438114454|ref|ZP_20870070.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|440761975|ref|ZP_20941041.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|440768722|ref|ZP_20947687.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|440772486|ref|ZP_20951390.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|445132410|ref|ZP_21382197.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|445144198|ref|ZP_21386947.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445150703|ref|ZP_21389849.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|445172333|ref|ZP_21396424.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445214949|ref|ZP_21401733.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|445232596|ref|ZP_21406109.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445343521|ref|ZP_21416990.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445354599|ref|ZP_21421498.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|452121290|ref|YP_007471538.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
gi|21263472|sp|Q8ZRC0.1|CLPX_SALTY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81309773|sp|Q57SB4.1|CLPX_SALCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81360133|sp|Q5PFN5.1|CLPX_SALPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044148|sp|A9MWX5.1|CLPX_SALPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238689941|sp|B5BD82.1|CLPX_SALPK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690000|sp|B5EXI9.1|CLPX_SALA4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690231|sp|B4T9E4.1|CLPX_SALHS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690324|sp|B5FKV4.1|CLPX_SALDC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690478|sp|B5R6V0.1|CLPX_SALG2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690697|sp|B4TMC7.1|CLPX_SALSV RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238693543|sp|B4SWU2.1|CLPX_SALNS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763861|sp|C0Q7X4.1|CLPX_SALPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|16418956|gb|AAL19404.1| specificity component of clpA-clpP ATP-dependent serine protease,
chaperone [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56128652|gb|AAV78158.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62126694|gb|AAX64397.1| specificity component of clpA-clpP ATP-dependent serine protease,
chaperone [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161364721|gb|ABX68489.1| hypothetical protein SPAB_03128 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404298|gb|ACF64520.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409786|gb|ACF70005.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194457636|gb|EDX46475.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194710322|gb|ACF89543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195631578|gb|EDX50098.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197094792|emb|CAR60325.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|197214475|gb|ACH51872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197241373|gb|EDY23993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197289504|gb|EDY28867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|197937074|gb|ACH74407.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602471|gb|EDZ01017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205271541|emb|CAR36359.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|205330906|gb|EDZ17670.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205333989|gb|EDZ20753.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205344101|gb|EDZ30865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205349962|gb|EDZ36593.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|224466814|gb|ACN44644.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261245732|emb|CBG23529.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992165|gb|ACY87050.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157060|emb|CBW16544.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911482|dbj|BAJ35456.1| ATP-dependent Clp protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320084723|emb|CBY94514.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321226027|gb|EFX51078.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322614727|gb|EFY11656.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618833|gb|EFY15721.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623540|gb|EFY20379.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629161|gb|EFY25940.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631882|gb|EFY28636.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637381|gb|EFY34083.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642066|gb|EFY38676.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647885|gb|EFY44360.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652563|gb|EFY48917.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653275|gb|EFY49608.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660576|gb|EFY56812.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664728|gb|EFY60921.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669219|gb|EFY65369.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670764|gb|EFY66897.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678997|gb|EFY75052.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682026|gb|EFY78051.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685145|gb|EFY81142.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|322713522|gb|EFZ05093.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|323128769|gb|ADX16199.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323192961|gb|EFZ78184.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196957|gb|EFZ82099.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203942|gb|EFZ88959.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323214176|gb|EFZ98934.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214500|gb|EFZ99251.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223057|gb|EGA07400.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227006|gb|EGA11187.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230176|gb|EGA14296.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233914|gb|EGA18003.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238392|gb|EGA22450.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244079|gb|EGA28088.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246240|gb|EGA30223.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251866|gb|EGA35729.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257863|gb|EGA41542.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261124|gb|EGA44716.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264946|gb|EGA48445.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272509|gb|EGA55916.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|326622152|gb|EGE28497.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326626795|gb|EGE33138.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|332987398|gb|AEF06381.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|353074865|gb|EHB40625.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|353578761|gb|EHC40500.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|353597182|gb|EHC53973.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353618301|gb|EHC69017.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353624601|gb|EHC73596.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353628151|gb|EHC76287.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353636600|gb|EHC82615.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353651590|gb|EHC93637.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353654324|gb|EHC95628.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|353668980|gb|EHD06017.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353669716|gb|EHD06540.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|357959982|gb|EHJ84000.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|363549143|gb|EHL33500.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363554590|gb|EHL38825.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363557704|gb|EHL41909.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363564588|gb|EHL48635.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565244|gb|EHL49280.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363571796|gb|EHL55700.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|363578797|gb|EHL62599.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|366056251|gb|EHN20577.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366065086|gb|EHN29281.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366065331|gb|EHN29521.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366071236|gb|EHN35336.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366073877|gb|EHN37941.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366080281|gb|EHN44253.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366084182|gb|EHN48093.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|366829496|gb|EHN56372.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372206384|gb|EHP19888.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|379986041|emb|CCF87815.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|380462078|gb|AFD57481.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|381299099|gb|EIC40173.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381300718|gb|EIC41776.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381301191|gb|EIC42247.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381310721|gb|EIC51547.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|381312571|gb|EIC53368.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|383797426|gb|AFH44508.1| ATP-dependent Clp protease ATP-binding ClpX [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|392616052|gb|EIW98487.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392616386|gb|EIW98819.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392733473|gb|EIZ90675.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392734437|gb|EIZ91619.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392736738|gb|EIZ93900.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392747923|gb|EJA04914.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392750051|gb|EJA07027.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392754189|gb|EJA11108.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392755459|gb|EJA12369.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392763550|gb|EJA20357.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392763870|gb|EJA20676.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392769771|gb|EJA26500.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392776880|gb|EJA33566.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392778865|gb|EJA35536.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392790915|gb|EJA47408.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392791951|gb|EJA48419.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392798674|gb|EJA54945.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803054|gb|EJA59255.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392814589|gb|EJA70540.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392815213|gb|EJA71157.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392822312|gb|EJA78124.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392826191|gb|EJA81924.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392827373|gb|EJA83082.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831551|gb|EJA87184.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392840223|gb|EJA95759.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395980755|gb|EJH89978.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395983275|gb|EJH92468.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395989998|gb|EJH99130.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|396000078|gb|EJI09093.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396003266|gb|EJI12254.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|396003658|gb|EJI12645.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|396008035|gb|EJI16970.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|396011053|gb|EJI19964.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|396020535|gb|EJI29376.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|396024461|gb|EJI33247.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|396029682|gb|EJI38418.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|396030458|gb|EJI39192.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|396035579|gb|EJI44251.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|396035932|gb|EJI44603.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|396044340|gb|EJI52937.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396052133|gb|EJI60641.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|396056909|gb|EJI65382.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|396057303|gb|EJI65775.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|396063942|gb|EJI72330.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|396064296|gb|EJI72683.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|396071392|gb|EJI79717.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|402515480|gb|EJW22894.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|402516042|gb|EJW23455.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|402516371|gb|EJW23782.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|402531076|gb|EJW38289.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|414023308|gb|EKT06742.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|414023849|gb|EKT07263.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|414025325|gb|EKT08655.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|414037189|gb|EKT19973.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|414038659|gb|EKT21366.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|414042388|gb|EKT24926.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|414051735|gb|EKT33819.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|414053184|gb|EKT35196.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|414057650|gb|EKT39403.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|414061848|gb|EKT43225.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|414067322|gb|EKT47700.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|434965094|gb|ELL58057.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|434967685|gb|ELL60486.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434975158|gb|ELL67468.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|434982331|gb|ELL74154.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434988363|gb|ELL79962.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434991632|gb|ELL83120.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434997711|gb|ELL88950.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|435000875|gb|ELL91997.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435007487|gb|ELL98340.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|435011458|gb|ELM02178.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435017055|gb|ELM07563.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435018221|gb|ELM08696.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435028363|gb|ELM18442.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|435030975|gb|ELM20964.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435039929|gb|ELM29698.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435041423|gb|ELM31165.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435045120|gb|ELM34765.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|435050065|gb|ELM39570.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435053977|gb|ELM43413.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435054334|gb|ELM43769.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435059776|gb|ELM49051.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435060273|gb|ELM49543.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435066950|gb|ELM56021.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|435074929|gb|ELM63752.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435078058|gb|ELM66802.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435081745|gb|ELM70386.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|435096365|gb|ELM84637.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|435096877|gb|ELM85139.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435099947|gb|ELM88138.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|435101277|gb|ELM89431.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|435111113|gb|ELM99018.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|435113537|gb|ELN01383.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|435114987|gb|ELN02777.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|435122188|gb|ELN09710.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435123366|gb|ELN10859.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435130870|gb|ELN18098.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|435134382|gb|ELN21510.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|435143453|gb|ELN30319.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|435143862|gb|ELN30716.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|435146441|gb|ELN33234.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435155565|gb|ELN42109.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|435156169|gb|ELN42671.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|435165098|gb|ELN51158.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|435168053|gb|ELN53906.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|435175817|gb|ELN61220.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|435183759|gb|ELN68720.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|435185206|gb|ELN70089.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
gi|435186994|gb|ELN71807.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|435205372|gb|ELN88971.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|435206983|gb|ELN90475.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|435212165|gb|ELN95190.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22558]
gi|435214886|gb|ELN97634.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|435216455|gb|ELN98930.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|435223966|gb|ELO05950.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|435230159|gb|ELO11493.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|435243442|gb|ELO23700.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|435243628|gb|ELO23885.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435248151|gb|ELO28072.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435250914|gb|ELO30624.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|435253180|gb|ELO32668.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435260049|gb|ELO39262.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435270472|gb|ELO48968.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435278367|gb|ELO56238.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|435279707|gb|ELO57451.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|435282537|gb|ELO60152.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435289125|gb|ELO66115.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|435292073|gb|ELO68862.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435297967|gb|ELO74224.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|435302260|gb|ELO78235.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
gi|435315857|gb|ELO89077.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|435321468|gb|ELO93883.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|435328853|gb|ELP00311.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|436416441|gb|ELP14347.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|436418435|gb|ELP16319.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|436424267|gb|ELP22050.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|444847338|gb|ELX72488.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444849098|gb|ELX74215.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|444856540|gb|ELX81567.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|444859545|gb|ELX84489.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444860440|gb|ELX85355.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444862184|gb|ELX87044.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444881325|gb|ELY05369.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444887689|gb|ELY11382.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|451910294|gb|AGF82100.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
Length = 423
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|411001021|gb|AFV98752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Snodgrassella sp. T3_2_35043]
gi|411001073|gb|AFV98801.1| ClpX [Candidatus Snodgrassella sp. TA7_36335]
Length = 420
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 218/305 (71%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP EI LD++VIGQE AKK L+VAVYNHY R+ G ++
Sbjct: 63 KLPTPAEIVANLDQYVIGQETAKKSLAVAVYNHYKRLRL-----------------GKEE 105
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE I+ KL
Sbjct: 106 GQVELSKSNILLIGPTGSGKTLLAQTLARKLDVPFVMADATTLTEAGYVGEDVEQIITKL 165
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 166 LGKCDFDVQKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 225
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + I +DT +ILFICGGAF +EK I +R + IGFGA V + V
Sbjct: 226 GGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENTNV--- 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L +TVE DLI +GLIPE +GR PV+ +L L E+ L+ +LTEPKNAL KQ++ +
Sbjct: 283 ---SELFQTVEPEDLIKFGLIPELIGRLPVIATLTELDEDALINILTEPKNALIKQFQAL 339
Query: 564 FQMNG 568
F M G
Sbjct: 340 FAMEG 344
>gi|295676518|ref|YP_003605042.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. CCGE1002]
gi|295436361|gb|ADG15531.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1002]
Length = 423
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 178/333 (53%), Positives = 233/333 (69%), Gaps = 35/333 (10%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
++R +G+G +G S+L PTP+EI + LD++VIGQERAKK+L+VAVYN
Sbjct: 46 EIIRDEAAGAGIEAG-----LSKSDL----PTPQEIREILDQYVIGQERAKKILAVAVYN 96
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + + D +EL KSNILL+GPTGSGKTLLA+TLAR +N
Sbjct: 97 HYKRLKHLDKK-----------------DEIELSKSNILLIGPTGSGKTLLAQTLARLLN 139
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPFVIADATTLT+AGYVGEDVE+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +
Sbjct: 140 VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPS 199
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF +EK
Sbjct: 200 ITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKV 259
Query: 476 ISERRQDSSIGFGAPVRANM-RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVL 534
I +R + + IGFGA V++ R G ++ VE DLI +GLIPE +GR PV+
Sbjct: 260 IVDRTEKTGIGFGASVKSKQDRDAG--------EVLREVEPEDLIKFGLIPELIGRLPVV 311
Query: 535 VSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E L+++L EPKNAL KQY K+F M
Sbjct: 312 ATLGKLDEAALMKILVEPKNALVKQYHKLFSME 344
>gi|16759429|ref|NP_455046.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142799|ref|NP_806141.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213160793|ref|ZP_03346503.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213425857|ref|ZP_03358607.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213646004|ref|ZP_03376057.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|289827299|ref|ZP_06545982.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|378960581|ref|YP_005218067.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|21263470|sp|Q8Z8V1.1|CLPX_SALTI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|25296072|pir||AD0558 ATP-dependent clp protease ATP-binding chain ClpX [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16501720|emb|CAD08908.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138431|gb|AAO70001.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|374354453|gb|AEZ46214.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
Length = 423
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLTGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E LVQ+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALVQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|366053347|ref|ZP_09451069.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
suebicus KCTC 3549]
Length = 416
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 222/302 (73%), Gaps = 22/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EI LD +VIGQE AKK LSVAVYNHY R+ + T+ DDDT
Sbjct: 62 PTPAEIVTKLDDYVIGQEDAKKTLSVAVYNHYKRV--------------NAMTNSSDDDT 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 -ELQKSNISLIGPTGSGKTYLAQSLAKILNVPFAIADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DY+V A++GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 167 SADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + IQI+TK+ILFI GGAF IE + +R D +IGFG R D V
Sbjct: 227 RKHPQQEFIQINTKNILFIVGGAFDGIETIVKDRLGDKTIGFGTNSRE-------IDQVT 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++++ V DL+++GLIPEF+GR P+L +L L E+ LV++LTEPKNAL KQY+K+
Sbjct: 280 EKNVLQHVVPEDLLSFGLIPEFIGRLPILTALQKLDEHDLVRILTEPKNALVKQYQKLIS 339
Query: 566 MN 567
++
Sbjct: 340 LD 341
>gi|410666835|ref|YP_006919206.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermacetogenium phaeum DSM 12270]
gi|409104582|gb|AFV10707.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermacetogenium phaeum DSM 12270]
Length = 419
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 222/304 (73%), Gaps = 25/304 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQE AKK+LSVAVYNHY RI G+ D
Sbjct: 61 IPKPKEIKEILDQYVIGQENAKKILSVAVYNHYKRI-----------------NMGMKSD 103
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNI+++GPTG GKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIIMLGPTGCGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILFICGGAF I+K I R +IGFGA + + G
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGIDKIIQNRIGKKTIGFGAELSRQEKDIG----- 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ + DL+ YGLIPEFVGR P++V+L AL E LV++LTEPKNAL +QY+K+F
Sbjct: 279 ---KILSQILPVDLLKYGLIPEFVGRVPIIVTLDALDEEALVRILTEPKNALVRQYQKLF 335
Query: 565 QMNG 568
+++G
Sbjct: 336 EIDG 339
>gi|292493107|ref|YP_003528546.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosococcus
halophilus Nc4]
gi|291581702|gb|ADE16159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosococcus
halophilus Nc4]
Length = 424
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/309 (55%), Positives = 223/309 (72%), Gaps = 24/309 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI L+++VIGQ RAKKVLSVAVYNHY R+ G +D
Sbjct: 66 LPTPHEIRDILNQYVIGQNRAKKVLSVAVYNHYKRLQL-----------------GKKND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q++T +ILFICGGAF +EK I +R + IGF A V++ V D
Sbjct: 229 GRKHPQQEFLQVNTANILFICGGAFAGLEKIIRDRSKKGGIGFSAEVKS------VEDKR 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+++ VE DLI YGLIPEFVGR PV+ +L L E L+++LTEPKNAL KQ+ ++F
Sbjct: 283 SMGEILQAVEPEDLIKYGLIPEFVGRMPVVATLDELDEAALIRILTEPKNALTKQFARLF 342
Query: 565 QM-NGQAAF 572
+M N + F
Sbjct: 343 EMENSKVEF 351
>gi|386617932|ref|YP_006137512.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
NA114]
gi|387828452|ref|YP_003348389.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
SE15]
gi|432420548|ref|ZP_19663106.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE178]
gi|432498682|ref|ZP_19740462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE216]
gi|432557455|ref|ZP_19794148.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE49]
gi|432693222|ref|ZP_19928437.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE162]
gi|432709269|ref|ZP_19944338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE6]
gi|432917570|ref|ZP_20122101.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE173]
gi|432924875|ref|ZP_20127014.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE175]
gi|432979942|ref|ZP_20168723.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE211]
gi|433095305|ref|ZP_20281521.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE139]
gi|433104573|ref|ZP_20290596.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE148]
gi|281177609|dbj|BAI53939.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
SE15]
gi|333968433|gb|AEG35238.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
NA114]
gi|430947713|gb|ELC67410.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE178]
gi|431032276|gb|ELD44987.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE216]
gi|431094508|gb|ELE00140.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE49]
gi|431237364|gb|ELF32364.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE162]
gi|431252990|gb|ELF46504.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE6]
gi|431447443|gb|ELH28175.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE173]
gi|431449534|gb|ELH30107.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE175]
gi|431496563|gb|ELH76146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE211]
gi|431619875|gb|ELI88772.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE139]
gi|431634597|gb|ELJ02838.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE148]
Length = 424
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|428223755|ref|YP_007107852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geitlerinema
sp. PCC 7407]
gi|427983656|gb|AFY64800.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geitlerinema
sp. PCC 7407]
Length = 445
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 177/314 (56%), Positives = 226/314 (71%), Gaps = 26/314 (8%)
Query: 259 SNLG-NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI-YNESSQKRSAGESSSC 316
SNL + P P+EI K LD+ VIGQE AKK+LSVAVYNHY R+ Y + K
Sbjct: 73 SNLSLGQMPKPQEIKKYLDEHVIGQESAKKILSVAVYNHYKRLSYIQGKGK--------- 123
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
G DD VEL+KSNILL+GPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGEDV
Sbjct: 124 ---GDFDDAVELQKSNILLIGPTGCGKTLLAQTLAEILDVPFAVADATTLTEAGYVGEDV 180
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT
Sbjct: 181 ENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGT 240
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF---GAPVRA 493
V NVP +G RKHP D IQIDT +ILFICGGAFV +EK++ +R SIGF P+
Sbjct: 241 VANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKSVEQRIGKKSIGFVQPNDPMSK 300
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
RA V ++ +E DL+ +G+IPEF+GR P++ L L E+ L ++LTEP+
Sbjct: 301 EKRAADV---------LKHLEPDDLVKFGMIPEFIGRVPIVAVLDPLDEDALTEILTEPR 351
Query: 554 NALGKQYRKMFQMN 567
NAL KQY+K+ +M+
Sbjct: 352 NALVKQYQKLLKMD 365
>gi|452820736|gb|EME27775.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Galdieria
sulphuraria]
Length = 533
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 165/261 (63%), Positives = 212/261 (81%), Gaps = 6/261 (2%)
Query: 308 RSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLT 367
++ G S + + V + VELEKSNIL++GPTGSGKTLLAKTLAR VNVPFVI DATTLT
Sbjct: 192 KAGGSRISISPEAVTEHEVELEKSNILIIGPTGSGKTLLAKTLARQVNVPFVIVDATTLT 251
Query: 368 QAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 427
QAGYVGEDVESILYKLL + +N+ AQ+GIVYIDE+DK +KK+E+++I+RDVSGEGVQQ
Sbjct: 252 QAGYVGEDVESILYKLLQAAHFNIPLAQKGIVYIDEIDKCSKKSENVSITRDVSGEGVQQ 311
Query: 428 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF 487
ALLKMLEGTVVNVPEKG RK+PRG+ IQIDTK+ILF+CGGAF +EK +++R +SIGF
Sbjct: 312 ALLKMLEGTVVNVPEKGGRKNPRGEFIQIDTKNILFMCGGAFAGLEKIVADRLAAASIGF 371
Query: 488 GAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQ 547
GA VR ++ + +S+++ VES+D I YGLIPEFVGR P+ + + +LT +QLV
Sbjct: 372 GAMVRQQ------SNRDLDASILDYVESTDFIKYGLIPEFVGRLPITLGVHSLTMDQLVS 425
Query: 548 VLTEPKNALGKQYRKMFQMNG 568
+LT+PKNAL KQ+++++ MNG
Sbjct: 426 ILTQPKNALVKQFQELYAMNG 446
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 249 SGSKDGCWGGS------NLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI-Y 301
+ + D C+G N FPTPK+I +GL+ +VIGQE+AKKVLSVAVYNHY R+
Sbjct: 44 AAADDSCFGDEYTETLRNTIQNFPTPKKIYEGLNDYVIGQEKAKKVLSVAVYNHYKRVAL 103
Query: 302 NE--SSQKRSAGESSSCTTDG 320
NE +S GE S T G
Sbjct: 104 NEYLTSISAETGEVSDTTARG 124
>gi|13476995|ref|NP_108565.1| ATP-dependent protease ATP-binding protein ClpX [Mesorhizobium loti
MAFF303099]
gi|21263478|sp|Q982V5.1|CLPX_RHILO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|14027758|dbj|BAB54351.1| ATP-dependent Clp protease ATP binding subunit; ClpX [Mesorhizobium
loti MAFF303099]
Length = 424
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 226/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD +VIGQ AK+VLSVAV+NHY R+ + AG+++
Sbjct: 66 PTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAH-------AGKNND---------- 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGFGA V + +
Sbjct: 229 RKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGATVAS-------PEDRR 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY+++F+
Sbjct: 282 TGDIFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQRLFE 341
Query: 566 MN 567
M
Sbjct: 342 ME 343
>gi|345870490|ref|ZP_08822442.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thiorhodococcus drewsii AZ1]
gi|343921693|gb|EGV32406.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thiorhodococcus drewsii AZ1]
Length = 424
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 220/306 (71%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N P P+EI LD+FVIGQE+AKKVLSVAVYNHY R+ E + D
Sbjct: 63 NHLPKPREINARLDEFVIGQEKAKKVLSVAVYNHYKRL-----------EVAEAKED--- 108
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+E+ KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 ---IEIAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVDKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFI GGAF ++K I R + + IGF A V + V+D
Sbjct: 226 QGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIQNRSRKTGIGFSAEVHS------VSD 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI YGLIPEFVGR PV+ +L L E L+ +LTEPK+A+ KQY +
Sbjct: 280 GRQIGELLSAVEPEDLIRYGLIPEFVGRLPVMATLEELDEAALMLILTEPKHAMVKQYAR 339
Query: 563 MFQMNG 568
+F+M G
Sbjct: 340 LFEMEG 345
>gi|351729534|ref|ZP_08947225.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax radicis
N35]
Length = 421
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 218/304 (71%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQ+ AK+ L+VAVYNHY R+ ++ D D
Sbjct: 65 LPTPVEIKTNLDNYVIGQDVAKRTLAVAVYNHYKRLRHK---------------DKAHKD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + +E DLI +GLIPE VGR PV+ +L L+E+ LVQ+LTEPKNAL KQY K+
Sbjct: 284 -LTEVFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|365538381|ref|ZP_09363556.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio ordalii
ATCC 33509]
Length = 426
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 220/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP +I + LD +VIGQE AKKVL+VAVYNHY R+ N G+ +S D
Sbjct: 65 LPTPHKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDKTS--------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGFGA VR+ +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGSGIGFGAEVRSK------DET 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTIGELFNQVEPEDLVKYGLIPEFIGRLPVTATLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|260589156|ref|ZP_05855069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Blautia
hansenii DSM 20583]
gi|260540576|gb|EEX21145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Blautia
hansenii DSM 20583]
Length = 456
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 174/312 (55%), Positives = 226/312 (72%), Gaps = 26/312 (8%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVE 327
P+EI + LD++VIGQ+ AKKVLSVAVYNHY R+ S TD VE
Sbjct: 87 PQEIKEILDEYVIGQDEAKKVLSVAVYNHYKRVL------------SGGNTD------VE 128
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
L+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K++ +
Sbjct: 129 LQKSNILMLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKIIQAA 188
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
DY++ AQ GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G RK
Sbjct: 189 DYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKIVEGTVASVPPQGGRK 248
Query: 448 HPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTS 507
HP+ + IQIDT +ILFICGGAF ++K I R+ +IGF A V+
Sbjct: 249 HPQQEFIQIDTTNILFICGGAFEGLDKIIETRKDTKAIGFNAQVQTKEEKN-------VG 301
Query: 508 SLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
L++ V DL+ +GLIPEFVGR PV+VSL AL +N LV++LTEPKN+L +QY+ +F ++
Sbjct: 302 ELLKEVMPQDLVKFGLIPEFVGRVPVVVSLNALDKNALVKILTEPKNSLVRQYQTLFNLD 361
Query: 568 G-QAAFYGKCFE 578
G F G+ E
Sbjct: 362 GINLEFEGEALE 373
>gi|300691405|ref|YP_003752400.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum PSI07]
gi|299078465|emb|CBJ51117.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum PSI07]
gi|344167642|emb|CCA79882.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [blood disease bacterium R229]
gi|344174668|emb|CCA86476.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia syzygii R24]
Length = 424
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 223/312 (71%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG + + PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + +
Sbjct: 59 GGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK---------- 108
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDV
Sbjct: 109 -------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R S IGFGA V++
Sbjct: 222 MASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKSGIGFGAEVKSKEE 281
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ ++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNA+
Sbjct: 282 RD-------VNEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNAI 334
Query: 557 GKQYRKMFQMNG 568
KQY+K+ M G
Sbjct: 335 VKQYQKLLAMEG 346
>gi|209521457|ref|ZP_03270165.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. H160]
gi|209498113|gb|EDZ98260.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. H160]
Length = 423
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 178/333 (53%), Positives = 233/333 (69%), Gaps = 35/333 (10%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
++R +G+G +G S+L PTP+EI + LD++VIGQERAKK+L+VAVYN
Sbjct: 46 EIIRDEAAGAGIEAG-----LSKSDL----PTPQEIREILDQYVIGQERAKKILAVAVYN 96
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + + D +EL KSNILL+GPTGSGKTLLA+TLAR +N
Sbjct: 97 HYKRLKHLDKK-----------------DEIELSKSNILLIGPTGSGKTLLAQTLARLLN 139
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPFVIADATTLT+AGYVGEDVE+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +
Sbjct: 140 VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPS 199
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF +EK
Sbjct: 200 ITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKV 259
Query: 476 ISERRQDSSIGFGAPVRANM-RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVL 534
I +R + + IGFGA V++ R G ++ VE DLI +GLIPE +GR PV+
Sbjct: 260 IVDRTEKTGIGFGASVKSKQDRDAG--------EVLREVEPEDLIKFGLIPELIGRLPVV 311
Query: 535 VSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E L+++L EPKNAL KQY K+F M
Sbjct: 312 ATLGKLDEAALMKILVEPKNALVKQYHKLFSME 344
>gi|407939905|ref|YP_006855546.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
KKS102]
gi|407897699|gb|AFU46908.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
KKS102]
Length = 421
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 218/304 (71%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQ+ AK+ L+VAVYNHY R+ ++ D D
Sbjct: 65 LPTPVEIKANLDNYVIGQDVAKRTLAVAVYNHYKRLRHK---------------DKAHKD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +ILFICGGAF +EK I R + S IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRS------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + +E DLI +GLIPE VGR PV+ +L L+E+ LVQ+LTEPKNAL KQY K+
Sbjct: 284 -LTEVFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|77360985|ref|YP_340560.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
haloplanktis TAC125]
gi|76875896|emb|CAI87117.1| ATPase, chaperone subunit of serine protease [Pseudoalteromonas
haloplanktis TAC125]
Length = 427
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 167/306 (54%), Positives = 225/306 (73%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P PKEI K LD +VIGQ+ AKKVLSVAVYNHY R+ N+S+++
Sbjct: 65 DKLPVPKEIRKHLDDYVIGQDHAKKVLSVAVYNHYKRLRNQSTKQ--------------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 --DIELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFG V+ + + ++
Sbjct: 228 QGGRKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRSHKNTGIGFGVDVKESAASRSLS 287
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D + VE DL+ YGLIPEF+GR PV+ +L L E L+Q+L+EPKNA+ KQ+
Sbjct: 288 DT------FKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALIQILSEPKNAITKQFS 341
Query: 562 KMFQMN 567
+F M
Sbjct: 342 VLFGME 347
>gi|395782018|ref|ZP_10462427.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
rattimassiliensis 15908]
gi|395419869|gb|EJF86155.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
rattimassiliensis 15908]
Length = 424
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 170/323 (52%), Positives = 230/323 (71%), Gaps = 25/323 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + + PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S
Sbjct: 58 GVKVRDGVPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKS----------- 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+ +EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 107 ------NDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVE 160
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL +DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 161 NIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTI 220
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A
Sbjct: 221 ASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA---- 276
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
D + +E DLI +GLIPEF+GR P++ +L L N LVQ+L++PKNAL
Sbjct: 277 ---PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALV 333
Query: 558 KQYRKMFQM-NGQAAFYGKCFEI 579
KQY+++F+M N + AF+ +
Sbjct: 334 KQYQRLFEMENVELAFHEDALRV 356
>gi|28897692|ref|NP_797297.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus RIMD 2210633]
gi|153839647|ref|ZP_01992314.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AQ3810]
gi|260366280|ref|ZP_05778736.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus K5030]
gi|260879438|ref|ZP_05891793.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AN-5034]
gi|260898291|ref|ZP_05906787.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus Peru-466]
gi|417320362|ref|ZP_12106908.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus 10329]
gi|433657175|ref|YP_007274554.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus BB22OP]
gi|31340005|sp|Q87R79.1|CLPX_VIBPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28805905|dbj|BAC59181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus RIMD 2210633]
gi|149746837|gb|EDM57825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AQ3810]
gi|308088429|gb|EFO38124.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus Peru-466]
gi|308093194|gb|EFO42889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AN-5034]
gi|308114044|gb|EFO51584.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus K5030]
gi|328473325|gb|EGF44173.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus 10329]
gi|432507863|gb|AGB09380.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus BB22OP]
Length = 426
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 225/310 (72%), Gaps = 24/310 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQM-NGQAAF 572
F++ N + F
Sbjct: 343 FELENAELEF 352
>gi|428300043|ref|YP_007138349.1| ATP-dependent Clp protease ATP-binding subunit clpX [Calothrix sp.
PCC 6303]
gi|428236587|gb|AFZ02377.1| ATP-dependent Clp protease ATP-binding subunit clpX [Calothrix sp.
PCC 6303]
Length = 447
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 170/316 (53%), Positives = 228/316 (72%), Gaps = 16/316 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI LD+ VIGQ+ AKKVLSVAVYNHY R+ +Q + G++S+
Sbjct: 78 NQIPKPREIKNYLDEHVIGQDEAKKVLSVAVYNHYKRLA--IAQSKGTGKNSA------- 128
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D +EL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 129 EDAIELQKSNILLIGPTGCGKTLLAQTLAKVLDVPFAVADATTLTEAGYVGEDVENILLR 188
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V++ +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 189 LLQVAELDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 248
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +EK + +R S+GF P + + D
Sbjct: 249 QGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRTGKKSMGFVQPGEGQSKEKRIAD 308
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ +E DL+ +G+IPEF+GR P++ + L E+ LV +LT+P++AL KQY+K
Sbjct: 309 T------LHHLEPDDLVKFGMIPEFIGRIPMVAVVDPLDEDALVSILTQPRSALVKQYQK 362
Query: 563 MFQM-NGQAAFYGKCF 577
+ M N Q F G+
Sbjct: 363 LLNMDNVQLEFKGEAL 378
>gi|325983081|ref|YP_004295483.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosomonas
sp. AL212]
gi|325532600|gb|ADZ27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosomonas
sp. AL212]
Length = 425
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 223/304 (73%), Gaps = 21/304 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EIC+ LD++VIGQE AKK+LSVAVYNHY R+ N +D DD
Sbjct: 63 LPVPREICQILDQYVIGQESAKKILSVAVYNHYKRLRNIPR------------SDETDD- 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF++ADAT LT+AGYVGEDVE+I+ KLL
Sbjct: 110 -IELSKSNILLVGPTGSGKTLLAQTLARLLDVPFIMADATALTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+ AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 QKCNYDAEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAMVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQ+DT +ILFICGGAF +++ I R + IGFG V+++ +G + V
Sbjct: 229 GRKHPNQEFIQVDTTNILFICGGAFDGLDRVIRARTEKGGIGFGVEVKSH--SGKDVNKV 286
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DL+ +GLIPEFVGR PV+ +L L E L+Q+LTEPKNAL KQY KMF
Sbjct: 287 -----LQQVEPEDLVKFGLIPEFVGRLPVVATLEELNEAALIQILTEPKNALVKQYWKMF 341
Query: 565 QMNG 568
M G
Sbjct: 342 NMEG 345
>gi|227113466|ref|ZP_03827122.1| ATP-dependent protease ATP-binding subunit ClpX [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|403057520|ref|YP_006645737.1| ATP-dependent protease ATP-binding subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|402804846|gb|AFR02484.1| ATP-dependent protease ATP-binding subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 424
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 224/306 (73%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS--SIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I E+R D+ IGF A V+ G D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK------GSAD 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+
Sbjct: 280 KATEGELLSNVEPGDLIKFGLIPEFIGRLPVVATLRELSEEALIQILREPKNALTKQYQA 339
Query: 563 MFQMNG 568
+F + G
Sbjct: 340 LFNLEG 345
>gi|375264872|ref|YP_005022315.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sp. EJY3]
gi|369840196|gb|AEX21340.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sp. EJY3]
Length = 426
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 225/310 (72%), Gaps = 24/310 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQM-NGQAAF 572
F++ N + F
Sbjct: 343 FELENAELEF 352
>gi|253687444|ref|YP_003016634.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259491264|sp|C6DB56.1|CLPX_PECCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|251754022|gb|ACT12098.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 424
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 224/306 (73%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS--SIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I E+R D+ IGF A V+ G D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK------GSAD 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+
Sbjct: 280 KATEGELLSNVEPGDLIKFGLIPEFIGRLPVVATLRELSEEALIQILREPKNALTKQYQA 339
Query: 563 MFQMNG 568
+F + G
Sbjct: 340 LFNLEG 345
>gi|83745914|ref|ZP_00942971.1| ClpX [Ralstonia solanacearum UW551]
gi|300703973|ref|YP_003745575.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum CFBP2957]
gi|386333414|ref|YP_006029584.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum Po82]
gi|421888084|ref|ZP_16319198.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum K60-1]
gi|83727604|gb|EAP74725.1| ClpX [Ralstonia solanacearum UW551]
gi|299071636|emb|CBJ42960.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum CFBP2957]
gi|334195863|gb|AEG69048.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum Po82]
gi|378966547|emb|CCF95946.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum K60-1]
Length = 424
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 223/312 (71%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG + + PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + +
Sbjct: 59 GGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK---------- 108
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDV
Sbjct: 109 -------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R S IGFGA V++
Sbjct: 222 MASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKSGIGFGAEVKSREE 281
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ ++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNA+
Sbjct: 282 RD-------VNEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNAI 334
Query: 557 GKQYRKMFQMNG 568
KQY+K+ M G
Sbjct: 335 VKQYQKLLAMEG 346
>gi|357059571|ref|ZP_09120413.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
infelix ATCC 43532]
gi|355371648|gb|EHG18992.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
infelix ATCC 43532]
Length = 421
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 225/304 (74%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI LD++VIGQ+ AKK LSVAVYNHY RI + G+ ++
Sbjct: 61 VPKPKEIRHILDQYVIGQDEAKKSLSVAVYNHYKRI--------NVGQGK--------NE 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 DVELKKSNILMIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 165 QAADYDIEKAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +QIDT +ILFICGGAF IE+ I R +GFGA VR+ R
Sbjct: 225 GRKHPQQELLQIDTTNILFICGGAFDGIEEIIESRLGKKQMGFGAEVRSKKRVS------ 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
V SL + + S DL+ GLIPEF+GR PV+V+L +L EN LVQ+LTEPKNAL KQ++K+
Sbjct: 279 VGESLSKVI-SEDLMKNGLIPEFIGRLPVVVTLNSLDENALVQILTEPKNALVKQFQKLL 337
Query: 565 QMNG 568
+++G
Sbjct: 338 ELDG 341
>gi|345876363|ref|ZP_08828135.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
weaveri LMG 5135]
gi|417956978|ref|ZP_12599909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
weaveri ATCC 51223]
gi|343966610|gb|EGV34865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
weaveri LMG 5135]
gi|343969410|gb|EGV37624.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
weaveri ATCC 51223]
Length = 396
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/306 (56%), Positives = 220/306 (71%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
K PTP EI + L+ VIGQE AKK L+VAVYNHY R+ S +SAG+
Sbjct: 21 KKLPTPAEIVENLNDHVIGQELAKKALAVAVYNHYKRL----SHPKSAGK---------- 66
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ K
Sbjct: 67 ---VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITK 123
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 124 LLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 183
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + I +DT +ILFICGGAF +EK I +R + IGFGA V + +
Sbjct: 184 QGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAVVSSK------DE 237
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ S L E+VE DLI +GLIPE +GR PV+ +L L E LV +LTEPKNAL KQY+
Sbjct: 238 NINISELFESVEPEDLIKFGLIPELIGRLPVIATLAELDEAALVNILTEPKNALVKQYQV 297
Query: 563 MFQMNG 568
+F M G
Sbjct: 298 LFDMEG 303
>gi|333977878|ref|YP_004515823.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333821359|gb|AEG14022.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum kuznetsovii DSM 6115]
Length = 416
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/313 (55%), Positives = 226/313 (72%), Gaps = 29/313 (9%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G +LG+ P PKEI + LD++VIGQE+AKK L+VAVYNHY RI
Sbjct: 52 GLDLGD-IPKPKEIKEILDQYVIGQEQAKKTLAVAVYNHYKRI----------------- 93
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
G D VEL+KSNI+++GPTG GKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE
Sbjct: 94 NLGGKIDDVELQKSNIIMLGPTGCGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVE 153
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+IL KL+ +DY+V A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV
Sbjct: 154 NILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTV 213
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV--RANM 495
+VP +G RKHP + IQ+DT +ILFICGGAF IEK I R +GFGA + R +
Sbjct: 214 ASVPPQGGRKHPHQEFIQLDTTNILFICGGAFDGIEKIIQNRIGKKGLGFGAEIQSRRDQ 273
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
+ G + ++ DL+ YGLIPEFVGR P++V+L AL E L+++LTEPKNA
Sbjct: 274 KIGEILSQIL---------PEDLLKYGLIPEFVGRLPIIVTLDALDEEALIRILTEPKNA 324
Query: 556 LGKQYRKMFQMNG 568
L KQY K+F+++G
Sbjct: 325 LVKQYEKLFELDG 337
>gi|383758646|ref|YP_005437631.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rubrivivax
gelatinosus IL144]
gi|381379315|dbj|BAL96132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rubrivivax
gelatinosus IL144]
Length = 423
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 218/304 (71%), Gaps = 22/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++VIGQ+ AK+ LSVAVYNHY R+ + + + D
Sbjct: 66 LPVPSEIKTSLDQYVIGQDVAKRTLSVAVYNHYKRLKHMGAGGK---------------D 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 EVELTKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 170
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 QNCNYDVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 230
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKH D +QIDT +ILFICGGAF +EK I R + S IGF A V +
Sbjct: 231 GRKHSNQDFLQIDTTNILFICGGAFDGLEKVIQNRTEKSGIGFAATVHSKSEKK------ 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S L VE DLI +GLIPE VGR PV+ +L LTE+ +VQ+LTEPKNAL KQY+K+F
Sbjct: 285 -VSDLFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNALVKQYQKLF 343
Query: 565 QMNG 568
M+G
Sbjct: 344 GMDG 347
>gi|431929876|ref|YP_007242922.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thioflavicoccus mobilis 8321]
gi|431828179|gb|AGA89292.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thioflavicoccus mobilis 8321]
Length = 423
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/306 (56%), Positives = 220/306 (71%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P P +I + LD++VIGQERAKKVLSVAVYNHY R+ E S+ +
Sbjct: 63 SKLPKPHDIKQSLDQYVIGQERAKKVLSVAVYNHYKRL--EISEAK-------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ +E+ KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -EEIEIAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFI GGAF ++K I R + IGF A V + V D
Sbjct: 226 QGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIRNRSRKGGIGFSAEVHS------VND 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ VE DLI YGLIPEFVGR PV+ +L L E LVQ+L EPKNAL KQY +
Sbjct: 280 ERNVGEVLSLVEPEDLIRYGLIPEFVGRLPVMATLDELDEQALVQILEEPKNALVKQYGR 339
Query: 563 MFQMNG 568
+F+M G
Sbjct: 340 LFEMEG 345
>gi|294083693|ref|YP_003550450.1| ATP-dependent protease Clp [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663265|gb|ADE38366.1| ATP-dependent protease Clp [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 420
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 221/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP +I LD +VIGQ RAK+VLSVAV+NHY R+ N AG +
Sbjct: 63 PTPADILAVLDGYVIGQSRAKRVLSVAVHNHYKRLAN-------AGRTGD---------- 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEISKSNILLVGPTGCGKTLLAQTLARMLDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I+ R + IGFGA VR D
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLDKLIAGRDTGAGIGFGADVRD-------PDDRK 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L+ ++E DLI +GLIPEFVGR PV+ +L L E LV++LTEPKNAL KQY K+F+
Sbjct: 279 IGELLGSLEPEDLIKFGLIPEFVGRLPVIATLEDLDEEALVRILTEPKNALVKQYEKLFE 338
Query: 566 MN 567
M+
Sbjct: 339 MD 340
>gi|319784103|ref|YP_004143579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|337269329|ref|YP_004613384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
opportunistum WSM2075]
gi|433775721|ref|YP_007306188.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Mesorhizobium australicum WSM2073]
gi|317169991|gb|ADV13529.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|336029639|gb|AEH89290.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
opportunistum WSM2075]
gi|433667736|gb|AGB46812.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Mesorhizobium australicum WSM2073]
Length = 424
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 227/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD +VIGQ AK+VLSVAV+NHY R+ + AG+++
Sbjct: 66 PTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAH-------AGKNND---------- 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGFGA V + + R G V
Sbjct: 229 RKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGAVVASPEDRRTGDV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY+++
Sbjct: 286 ------FRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQRL 339
Query: 564 FQMN 567
F+M
Sbjct: 340 FEME 343
>gi|440288750|ref|YP_007341515.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Enterobacteriaceae bacterium strain FGI 57]
gi|440048272|gb|AGB79330.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Enterobacteriaceae bacterium strain FGI 57]
Length = 424
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V++ TD
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKSK------TDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLTQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|357025388|ref|ZP_09087512.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
amorphae CCNWGS0123]
gi|355542632|gb|EHH11784.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
amorphae CCNWGS0123]
Length = 424
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 227/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD +VIGQ AK+VLSVAV+NHY R+ + AG+++
Sbjct: 66 PTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAH-------AGKNND---------- 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGFGA V + + R G V
Sbjct: 229 RKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGAIVASPEDRRTGDV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY+++
Sbjct: 286 ------FRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQRL 339
Query: 564 FQMN 567
F+M
Sbjct: 340 FEME 343
>gi|417949952|ref|ZP_12593081.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
ATCC 33789]
gi|342807382|gb|EGU42571.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
ATCC 33789]
Length = 426
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/304 (57%), Positives = 219/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD +VIGQE AKKVL+VAVYNHY R+ N T +GV
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRN-----------GDTTAEGV--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVAPVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + S IGFGA VR+ +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK------DET 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|241663133|ref|YP_002981493.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia
pickettii 12D]
gi|309781949|ref|ZP_07676680.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia sp.
5_7_47FAA]
gi|404377637|ref|ZP_10982737.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia sp.
5_2_56FAA]
gi|240865160|gb|ACS62821.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia
pickettii 12D]
gi|308919293|gb|EFP64959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia sp.
5_7_47FAA]
gi|348611500|gb|EGY61145.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia sp.
5_2_56FAA]
Length = 424
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 223/312 (71%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG + + PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + +
Sbjct: 59 GGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK---------- 108
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDV
Sbjct: 109 -------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R + IGFGA V++
Sbjct: 222 MASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKTGIGFGAEVQSKEE 281
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
S ++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNA+
Sbjct: 282 RD-------VSEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNAI 334
Query: 557 GKQYRKMFQMNG 568
KQY+K+ M G
Sbjct: 335 VKQYQKLLAMEG 346
>gi|114569889|ref|YP_756569.1| ATP-dependent protease ATP-binding subunit ClpX [Maricaulis maris
MCS10]
gi|122316140|sp|Q0AQ06.1|CLPX_MARMM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114340351|gb|ABI65631.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Maricaulis
maris MCS10]
Length = 423
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/303 (57%), Positives = 225/303 (74%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EI L+ +VIGQ AK+VL+VAV+NHY R+ N +SQ +
Sbjct: 66 PSPQEIFNVLNDYVIGQAHAKRVLAVAVHNHYKRL-NHASQ----------------NSD 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILF+ GGAF ++K IS+R Q SSIGFGA VR DA
Sbjct: 229 RKHPQQEFLQVDTTNILFVVGGAFAGLDKVISQRGQGSSIGFGADVRE-------PDARR 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PV+ +L L LVQ+LTEPKNAL KQY+++F+
Sbjct: 282 TGEILREVEPDDLLRFGLIPEFVGRLPVIATLEDLDIGALVQILTEPKNALVKQYQRLFE 341
Query: 566 MNG 568
M G
Sbjct: 342 MEG 344
>gi|189424986|ref|YP_001952163.1| ATP-dependent protease ATP-binding subunit ClpX [Geobacter lovleyi
SZ]
gi|238692096|sp|B3E1Z3.1|CLPX_GEOLS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189421245|gb|ACD95643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Geobacter
lovleyi SZ]
Length = 419
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 218/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
K P PKEI + LD++VIGQE AKKVLSVAVYNHY RI +R A
Sbjct: 61 TKLPKPKEIKEFLDEYVIGQETAKKVLSVAVYNHYKRI------ERPAKPGD-------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VE++KSNIL++GPTGSGKTLLA+TLAR + VPF IADAT LT+AGYVGEDVE+I+
Sbjct: 107 ---VEMQKSNILILGPTGSGKTLLAQTLARMLKVPFAIADATNLTEAGYVGEDVENIILS 163
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +DY+V AQ+GIVYIDE+DKI +KAES +++RDVSGEGVQQALLK++EGTV ++P
Sbjct: 164 LLQAADYDVERAQKGIVYIDEIDKIARKAESPSLTRDVSGEGVQQALLKIIEGTVASIPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
KG RKHP+ + +++DT +ILFICGGAF ++ I +R ++GFGA V+ +
Sbjct: 224 KGGRKHPQQEFLKVDTSNILFICGGAFAGLDGVIQQRIGKKTLGFGADVKKKLEKKA--- 280
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ V DL+ YG IPEF+GR P+L SL L E+ LVQ+LTEPKNAL KQY+K
Sbjct: 281 ----GELLLQVTPEDLLKYGYIPEFIGRLPMLASLTELDEDALVQILTEPKNALTKQYQK 336
Query: 563 MFQMNG 568
+F M G
Sbjct: 337 LFDMEG 342
>gi|187928949|ref|YP_001899436.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia
pickettii 12J]
gi|238691846|sp|B2UFQ3.1|CLPX_RALPJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|187725839|gb|ACD27004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia
pickettii 12J]
Length = 424
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 223/312 (71%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
GG + + PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + +
Sbjct: 59 GGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK---------- 108
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDV
Sbjct: 109 -------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R + IGFGA V++
Sbjct: 222 MASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKTGIGFGAEVQSKEE 281
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
S ++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNA+
Sbjct: 282 RD-------VSEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNAI 334
Query: 557 GKQYRKMFQMNG 568
KQY+K+ M G
Sbjct: 335 VKQYQKLLAMEG 346
>gi|53719040|ref|YP_108026.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei K96243]
gi|52209454|emb|CAH35405.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
pseudomallei K96243]
Length = 430
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 222/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 73 LPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 115
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 116 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 175
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 176 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 235
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++ DA
Sbjct: 236 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE----RDA- 290
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY+K+F
Sbjct: 291 --GEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLF 348
Query: 565 QMN 567
M
Sbjct: 349 AME 351
>gi|359453082|ref|ZP_09242407.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20495]
gi|414070582|ref|ZP_11406565.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. Bsw20308]
gi|358049850|dbj|GAA78656.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20495]
gi|410807036|gb|EKS13019.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. Bsw20308]
Length = 427
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 227/312 (72%), Gaps = 30/312 (9%)
Query: 260 NLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTD 319
+ +K P PKEI K LD +VIGQ+ AKKVLSVAVYNHY R+ N+S+++
Sbjct: 62 DTSDKLPVPKEIRKHLDDYVIGQDHAKKVLSVAVYNHYKRLRNQSTKQ------------ 109
Query: 320 GVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 110 -----DIELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENI 164
Query: 380 LYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 165 IQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAS 224
Query: 440 VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAG 498
VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFG V+
Sbjct: 225 VPPQGGRKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRSHKNTGIGFGVSVK------ 278
Query: 499 GVTDAVVTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
++ + SL ET VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNA
Sbjct: 279 ---ESAASRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALVQILSEPKNA 335
Query: 556 LGKQYRKMFQMN 567
+ KQ+ +F M
Sbjct: 336 ITKQFSVLFGME 347
>gi|126727091|ref|ZP_01742928.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2150]
gi|126703519|gb|EBA02615.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2150]
Length = 423
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPKEIC+ LD +VIGQ AK+VLSVAV+NHY R+ + AG+ S
Sbjct: 64 PTPKEICEVLDDYVIGQGHAKRVLSVAVHNHYKRLNH-------AGKGSE---------- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNI+L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILF+CGGAF ++K I++R + SSIGFGA VR G
Sbjct: 227 RKHPQQEFLQVDTTNILFVCGGAFAGLDKIIAQRGKGSSIGFGADVRDEATKG------- 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
++ +E DL+ +GLIPEFVGR PV+ +L L + LV +L+EPKNAL KQY+++F+
Sbjct: 280 IGETLKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDLDALVTILSEPKNALVKQYQRLFE 339
Query: 566 MN 567
+
Sbjct: 340 LE 341
>gi|310820095|ref|YP_003952453.1| ATP-dependent CLP protease, ATP-binding subunit CLPx [Stigmatella
aurantiaca DW4/3-1]
gi|309393167|gb|ADO70626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Stigmatella
aurantiaca DW4/3-1]
Length = 425
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++V+GQ+RAKKVLSVAV+NHY RI ++ V
Sbjct: 64 RIPRPSEIKSILDEYVVGQDRAKKVLSVAVHNHYKRIESK-----------------VQM 106
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+I+ L
Sbjct: 107 DDVELQKSNILLLGPTGSGKTLLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNL 166
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D+++ AQ+GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP K
Sbjct: 167 LQAADHDIERAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKIIEGTIANVPPK 226
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +E+ I R S+GFGA +++ +
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFGGLEQVIERRLGGRSLGFGADIQSKKQRN----- 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ L++ VE DL+ +G+IPEF+GR P++ +L L E LV +L++PKNAL KQYRK+
Sbjct: 282 --LTELLKHVEPEDLLKFGMIPEFIGRLPIITALEELDEPALVNILSQPKNALTKQYRKL 339
Query: 564 FQMNG 568
F+++G
Sbjct: 340 FELDG 344
>gi|262404274|ref|ZP_06080829.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC586]
gi|262349306|gb|EEY98444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC586]
Length = 426
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 221/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N T DGV
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN-----------GDTTGDGV--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ ++
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK------DNS 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|291616550|ref|YP_003519292.1| ClpX [Pantoea ananatis LMG 20103]
gi|378768261|ref|YP_005196732.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea
ananatis LMG 5342]
gi|386014923|ref|YP_005933200.1| ATP-dependent Clp protease ATP- binding subunit ClpX [Pantoea
ananatis AJ13355]
gi|386080396|ref|YP_005993921.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea
ananatis PA13]
gi|291151580|gb|ADD76164.1| ClpX [Pantoea ananatis LMG 20103]
gi|327392982|dbj|BAK10404.1| ATP-dependent Clp protease ATP- binding subunit ClpX [Pantoea
ananatis AJ13355]
gi|354989577|gb|AER33701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea
ananatis PA13]
gi|365187745|emb|CCF10695.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea
ananatis LMG 5342]
Length = 423
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLSQCEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|85373055|ref|YP_457117.1| ATP-dependent protease ATP-binding subunit ClpX [Erythrobacter
litoralis HTCC2594]
gi|122545320|sp|Q2NDC1.1|CLPX_ERYLH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|84786138|gb|ABC62320.1| ATP-dependent Clp protease ATPase subunit [Erythrobacter litoralis
HTCC2594]
Length = 423
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 219/302 (72%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P P EIC L+ +VIGQ+RAK+VLSVAV+NHY R+ + +G++ D
Sbjct: 65 PAPSEICATLNDYVIGQDRAKRVLSVAVHNHYKRL-------KHSGKA----------DG 107
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ GIVYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVDKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R Q SIGFGA V D
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV-------ADPDKRK 280
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
L+E E DL+ +GLIPEFVGR PV+ +L L + LV +L EPKNA+ KQY K+F+
Sbjct: 281 VGELLEKSEPEDLLKFGLIPEFVGRLPVIATLHDLDVDALVTILQEPKNAIVKQYSKLFE 340
Query: 566 MN 567
+
Sbjct: 341 LE 342
>gi|374369271|ref|ZP_09627305.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
basilensis OR16]
gi|373099184|gb|EHP40271.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
basilensis OR16]
Length = 424
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 223/312 (71%), Gaps = 24/312 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G++ + PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + +
Sbjct: 59 AGASAKSDLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK---------- 108
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDV
Sbjct: 109 -------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV 161
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 ENIIQKLLQNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 221
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R + IGF A V++
Sbjct: 222 MASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVQSK-- 279
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ S ++ VE DLI +GLIPE +GR PV+ +L L E L+Q+L EPKNAL
Sbjct: 280 -----EEREASEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMQILVEPKNAL 334
Query: 557 GKQYRKMFQMNG 568
KQY+K+ M G
Sbjct: 335 IKQYQKLLAMEG 346
>gi|329296783|ref|ZP_08254119.1| ATP-dependent protease ATP-binding subunit ClpX [Plautia stali
symbiont]
Length = 423
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|331082572|ref|ZP_08331697.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330400550|gb|EGG80180.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 436
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 174/312 (55%), Positives = 226/312 (72%), Gaps = 26/312 (8%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVE 327
P+EI + LD++VIGQ+ AKKVLSVAVYNHY R+ S TD VE
Sbjct: 67 PQEIKEILDEYVIGQDEAKKVLSVAVYNHYKRVL------------SGGNTD------VE 108
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
L+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K++ +
Sbjct: 109 LQKSNILMLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKIIQAA 168
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
DY++ AQ GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G RK
Sbjct: 169 DYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKIVEGTVASVPPQGGRK 228
Query: 448 HPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTS 507
HP+ + IQIDT +ILFICGGAF ++K I R+ +IGF A V+
Sbjct: 229 HPQQEFIQIDTTNILFICGGAFEGLDKIIETRKDTKAIGFNAQVQTKEEKN-------VG 281
Query: 508 SLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
L++ V DL+ +GLIPEFVGR PV+VSL AL +N LV++LTEPKN+L +QY+ +F ++
Sbjct: 282 ELLKEVMPQDLVKFGLIPEFVGRVPVVVSLNALDKNALVKILTEPKNSLVRQYQTLFNLD 341
Query: 568 G-QAAFYGKCFE 578
G F G+ E
Sbjct: 342 GINLEFEGEALE 353
>gi|348028492|ref|YP_004871178.1| ATP-dependent protease ATP-binding subunit ClpX [Glaciecola
nitratireducens FR1064]
gi|347945835|gb|AEP29185.1| ATP-dependent protease ATP-binding subunit ClpX [Glaciecola
nitratireducens FR1064]
Length = 425
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 221/306 (72%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTP EI K LD +VIGQE AKKVL+VAVYNHY R+ N
Sbjct: 63 DALPTPAEIHKHLDDYVIGQEHAKKVLAVAVYNHYKRLRNNDVH---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+ AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDPEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFGA V++++ V
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAAKNAGIGFGAEVKSSLNKKAV- 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S L + VE DL+ YGLIPEF+GR PV+ SL L E+ L+Q+L EPKNA+ KQY
Sbjct: 285 -----SQLFKEVEPEDLVKYGLIPEFIGRLPVVASLEELNEDALIQILKEPKNAITKQYG 339
Query: 562 KMFQMN 567
+F +
Sbjct: 340 ALFALE 345
>gi|291518669|emb|CBK73890.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Butyrivibrio fibrisolvens 16/4]
Length = 428
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVE 327
P+++ LD++VIGQ+ AKKVLSVAVYNHY RI DD VE
Sbjct: 67 PEDMKAFLDQYVIGQDEAKKVLSVAVYNHYKRIMANP-----------------DDIDVE 109
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
L+KSN+L++GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL KL+ +
Sbjct: 110 LQKSNVLMLGPTGSGKTLLAQTLARVLGVPFAIADATTLTEAGYVGEDVENILLKLIQAA 169
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
++++ A+ GIVYIDE+DKITKK+E+++I+RDVSGEGVQQALLK++EGTV NVP +G RK
Sbjct: 170 EFDIKKAEIGIVYIDEIDKITKKSENVSITRDVSGEGVQQALLKIIEGTVANVPPQGGRK 229
Query: 448 HPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTS 507
HP+ + I IDTK+ILFICGGAF +EK IS+R S+IGFGA V+
Sbjct: 230 HPQQETIAIDTKNILFICGGAFEGLEKIISQRTNVSAIGFGADVKDKNNQK-------ID 282
Query: 508 SLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
L++ D I YGLIPEF+GR P+ VSL LTE+ ++++L EPKN+L KQY+ +F+M+
Sbjct: 283 ELLQQALPQDFIKYGLIPEFIGRVPINVSLNELTEDDMIRILKEPKNSLTKQYQALFKMD 342
Query: 568 GQAAFY 573
G F+
Sbjct: 343 GVKLFF 348
>gi|317047176|ref|YP_004114824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea sp.
At-9b]
gi|316948793|gb|ADU68268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea sp.
At-9b]
Length = 423
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|149192522|ref|ZP_01870700.1| ATP-dependent protease ATP-binding subunit [Vibrio shilonii AK1]
gi|148833642|gb|EDL50701.1| ATP-dependent protease ATP-binding subunit [Vibrio shilonii AK1]
Length = 417
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 219/305 (71%), Gaps = 23/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP++I LD +VIGQ+ AKKVLSVAVYNHY R+ N T DGV
Sbjct: 56 LPTPRDIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRN-----------GDTTADGV--- 101
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 159
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 160 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQG 219
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 220 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIDQRVATGTGIGFGAEVRSKDETKTV--- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E+ L+Q+L EPKNAL KQY +
Sbjct: 277 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEDALIQILNEPKNALTKQYGAL 333
Query: 564 FQMNG 568
F + G
Sbjct: 334 FDLEG 338
>gi|119473284|ref|ZP_01614936.1| ATP-dependent protease ATP-binding subunit [Alteromonadales
bacterium TW-7]
gi|359447957|ref|ZP_09237513.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20480]
gi|392538774|ref|ZP_10285911.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
marina mano4]
gi|119444507|gb|EAW25827.1| ATP-dependent protease ATP-binding subunit [Alteromonadales
bacterium TW-7]
gi|358046181|dbj|GAA73762.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20480]
Length = 427
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 172/309 (55%), Positives = 226/309 (73%), Gaps = 30/309 (9%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P PKEI K LD +VIGQ+ AKKVLSVAVYNHY R+ N+S+++
Sbjct: 65 DKLPVPKEIRKHLDDYVIGQDHAKKVLSVAVYNHYKRLRNQSTKQ--------------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 --DIELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFG V+
Sbjct: 228 QGGRKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRSHKNTGIGFGVSVK--------- 278
Query: 502 DAVVTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
++ T SL ET VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNA+ K
Sbjct: 279 ESAETRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALVQILSEPKNAITK 338
Query: 559 QYRKMFQMN 567
Q+ +F M
Sbjct: 339 QFSVLFGME 347
>gi|186475777|ref|YP_001857247.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
phymatum STM815]
gi|238691290|sp|B2JGL6.1|CLPX_BURP8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|184192236|gb|ACC70201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
phymatum STM815]
Length = 423
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/333 (53%), Positives = 232/333 (69%), Gaps = 35/333 (10%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
++R +G+G +G S+L P+P+EI LD++VIGQERAKK+L+VAVYN
Sbjct: 46 EIIRDEAAGAGLETG-----LSKSDL----PSPQEIRDILDQYVIGQERAKKILAVAVYN 96
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + + D VEL KSNILL+GPTGSGKTLLA+TLAR +N
Sbjct: 97 HYKRLKHLDKK-----------------DDVELSKSNILLIGPTGSGKTLLAQTLARLLN 139
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPFVIADATTLT+AGYVGEDVE+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +
Sbjct: 140 VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPS 199
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF +EK
Sbjct: 200 ITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKV 259
Query: 476 ISERRQDSSIGFGAPVRANM-RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVL 534
I +R + + IGFGA V++ R G ++ VE DLI +GLIPE +GR PV+
Sbjct: 260 IVDRTEKTGIGFGASVKSKQDRDAG--------EVLREVEPEDLIKFGLIPELIGRLPVV 311
Query: 535 VSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E L+++L EPKNAL KQY K+F M
Sbjct: 312 ATLGKLDETALMKILVEPKNALVKQYHKLFNME 344
>gi|271499598|ref|YP_003332623.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya
dadantii Ech586]
gi|270343153|gb|ACZ75918.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya
dadantii Ech586]
Length = 424
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 224/306 (73%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N S ++
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRNSDS-----------------NN 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS--SIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I E+R D+ IGF A V+ GV+
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK------GVSQ 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI +GLIPEF+GR PV+ +L L E+ L+Q+L EPKNAL KQY+
Sbjct: 280 KATEGELLGQVEPGDLIKFGLIPEFIGRLPVVATLKELDEDALIQILREPKNALTKQYQA 339
Query: 563 MFQMNG 568
+F++ G
Sbjct: 340 LFKLEG 345
>gi|423138927|ref|ZP_17126565.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
gi|379051481|gb|EHY69372.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
Length = 423
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRIHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|329119329|ref|ZP_08248015.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464474|gb|EGF10773.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 422
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 217/305 (71%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P+P EI L+ VIGQE+AKK L+VAVYNHY R+ + +
Sbjct: 59 KLPSPAEIVANLNDHVIGQEQAKKALAVAVYNHYKRLRHPKAS----------------- 101
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KL
Sbjct: 102 DNVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 162 LGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT +ILF+CGGAF +EK I +R + IGFGA V + +
Sbjct: 222 GGRKHPNQDFIQVDTTNILFVCGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADI--- 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L E VE DLI +GLIPE +GR PV+ +L L E+ LV +LTEPKNAL KQY+ +
Sbjct: 279 ---SELFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQAL 335
Query: 564 FQMNG 568
+M G
Sbjct: 336 IRMEG 340
>gi|165976698|ref|YP_001652291.1| ATP-dependent protease ATP-binding subunit ClpX [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|165876799|gb|ABY69847.1| ATP-dependent Clp protease, ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 378
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 221/304 (72%), Gaps = 20/304 (6%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EI LD++VIGQE AKKVLSVAVYNHY R+ N S + T+GV
Sbjct: 24 PTPHEINAHLDEYVIGQEHAKKVLSVAVYNHYKRLRNALSGHKE--------TNGV---- 71
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLTQAGYVGEDVE+++ KLL
Sbjct: 72 -ELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLM 130
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
D++ A++GIV+IDE+DKIT+K+ES +I+RDVSGEGVQQALLK++EGTV N+ +G+
Sbjct: 131 KCDFDAEQAERGIVFIDEIDKITRKSESPSITRDVSGEGVQQALLKLIEGTVANINPQGS 190
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+G+ I +DT ILFICGGAF ++K + R + IGFGA ++ + +T+
Sbjct: 191 RKHPKGETIPVDTSKILFICGGAFAGLDKIVEARSNKQGGIGFGAELKKDKEREDLTE-- 248
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L + VE DL+ +GLIPE +GR PV+ L L E L+Q+LTEPKNA+ KQY+ +F
Sbjct: 249 ----LFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPKNAIIKQYQALF 304
Query: 565 QMNG 568
QM G
Sbjct: 305 QMEG 308
>gi|434391261|ref|YP_007126208.1| ATP-dependent Clp protease ATP-binding subunit clpX [Gloeocapsa sp.
PCC 7428]
gi|428263102|gb|AFZ29048.1| ATP-dependent Clp protease ATP-binding subunit clpX [Gloeocapsa sp.
PCC 7428]
Length = 446
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 228/305 (74%), Gaps = 15/305 (4%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P+EI K LD VIGQ+ AKKVLSVAVYNHY R+ Q +++G++SS
Sbjct: 77 SQMPKPREIKKHLDDHVIGQDEAKKVLSVAVYNHYKRL--SLVQAKNSGKASS------- 127
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
++ VEL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 128 EEAVELQKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLR 187
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP
Sbjct: 188 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTLANVPP 247
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +EK + +R S+GF P ++ R
Sbjct: 248 QGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRTGKKSMGFIQPGESSSRDQR--- 304
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T+ ++ +E DL+ +G+IPEF+GR PV+ L L E L+ +LT+P++AL KQY+K
Sbjct: 305 ---TADVLRHLEPDDLVKFGMIPEFIGRVPVVAVLDPLDEEALMAILTQPRSALVKQYQK 361
Query: 563 MFQMN 567
+ +M+
Sbjct: 362 LLKMD 366
>gi|153835694|ref|ZP_01988361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
harveyi HY01]
gi|156973713|ref|YP_001444620.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio harveyi
ATCC BAA-1116]
gi|269961044|ref|ZP_06175413.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio harveyi
1DA3]
gi|424033221|ref|ZP_17772636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-01]
gi|424042694|ref|ZP_17780375.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-02]
gi|424047073|ref|ZP_17784634.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-03]
gi|166215218|sp|A7MV82.1|CLPX_VIBHB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148867675|gb|EDL66951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
harveyi HY01]
gi|156525307|gb|ABU70393.1| hypothetical protein VIBHAR_01418 [Vibrio harveyi ATCC BAA-1116]
gi|269834263|gb|EEZ88353.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio harveyi
1DA3]
gi|408874955|gb|EKM14117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-01]
gi|408884371|gb|EKM23115.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-03]
gi|408887527|gb|EKM26079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-02]
Length = 426
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 222/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|37527728|ref|NP_931073.1| ATP-dependent protease ATP-binding subunit [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|46576407|sp|Q7N0L4.1|CLPX_PHOLL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|36787164|emb|CAE16240.1| ATP-dependent Clp protease ATP-binding subunit [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 423
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 172/307 (56%), Positives = 223/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N PTP EI + LD +VIGQE AKKVL+VAVYNHY R+ N G++S
Sbjct: 62 NALPTPHEIRQHLDDYVIGQETAKKVLAVAVYNHYKRLRN--------GDTS-------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -NGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP
Sbjct: 165 LLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS-IGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R S+ IGF A V+ G +
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTSTGIGFSAKVK------GES 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+
Sbjct: 279 EKATEGELLAQAEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQ 338
Query: 562 KMFQMNG 568
+F + G
Sbjct: 339 ALFNLEG 345
>gi|452964827|gb|EME69860.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetospirillum
sp. SO-1]
Length = 421
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 222/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC LD +VIGQ AKKVLSVAV+NHY R+ + G ++
Sbjct: 64 PTPKDICAVLDDYVIGQGHAKKVLSVAVHNHYKRLQH-----------------GGKNNE 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
++YNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I R + +SIGFGA VR D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGRGTSIGFGADVRG-------PDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PVL +L L + L+ +L++PKNAL KQY+++F+
Sbjct: 280 TGEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|32035049|ref|ZP_00135115.1| COG1219: ATP-dependent protease Clp, ATPase subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208745|ref|YP_001053970.1| ATP-dependent protease ATP-binding subunit ClpX [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|190150598|ref|YP_001969123.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250640|ref|ZP_07336837.1| ATP-dependent protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252092|ref|ZP_07338261.1| ATP-dependent protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307246196|ref|ZP_07528277.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307248302|ref|ZP_07530327.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307252912|ref|ZP_07534800.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307255176|ref|ZP_07536994.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257344|ref|ZP_07539114.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259614|ref|ZP_07541338.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307263942|ref|ZP_07545545.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126097537|gb|ABN74365.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|189915729|gb|ACE61981.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649074|gb|EFL79261.1| ATP-dependent protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650628|gb|EFL80787.1| ATP-dependent protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306852805|gb|EFM85029.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306855172|gb|EFM87350.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306859550|gb|EFM91575.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306862049|gb|EFM94025.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864194|gb|EFM96107.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866259|gb|EFM98123.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306870704|gb|EFN02445.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 419
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 221/304 (72%), Gaps = 20/304 (6%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EI LD++VIGQE AKKVLSVAVYNHY R+ N S + T+GV
Sbjct: 65 PTPHEINAHLDEYVIGQEHAKKVLSVAVYNHYKRLRNALSGHKE--------TNGV---- 112
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLTQAGYVGEDVE+++ KLL
Sbjct: 113 -ELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLM 171
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
D++ A++GIV+IDE+DKIT+K+ES +I+RDVSGEGVQQALLK++EGTV N+ +G+
Sbjct: 172 KCDFDAEQAERGIVFIDEIDKITRKSESPSITRDVSGEGVQQALLKLIEGTVANINPQGS 231
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+G+ I +DT ILFICGGAF ++K + R + IGFGA ++ + +T+
Sbjct: 232 RKHPKGETIPVDTSKILFICGGAFAGLDKIVEARSNKQGGIGFGAELKKDKEREDLTE-- 289
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L + VE DL+ +GLIPE +GR PV+ L L E L+Q+LTEPKNA+ KQY+ +F
Sbjct: 290 ----LFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPKNAIIKQYQALF 345
Query: 565 QMNG 568
QM G
Sbjct: 346 QMEG 349
>gi|388602069|ref|ZP_10160465.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
DS40M4]
gi|444425229|ref|ZP_21220674.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
CAIM 519 = NBRC 15631]
gi|444241517|gb|ELU53040.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
CAIM 519 = NBRC 15631]
Length = 426
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 222/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|308126598|ref|ZP_05911209.2| ClpX C4-type zinc finger domain protein [Vibrio parahaemolyticus
AQ4037]
gi|308108657|gb|EFO46197.1| ClpX C4-type zinc finger domain protein [Vibrio parahaemolyticus
AQ4037]
Length = 414
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 225/310 (72%), Gaps = 24/310 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 53 LPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 96
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 97 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 156
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 157 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 216
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 217 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTV--- 273
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 274 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 330
Query: 564 FQM-NGQAAF 572
F++ N + F
Sbjct: 331 FELENAELEF 340
>gi|254415781|ref|ZP_05029539.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Coleofasciculus chthonoplastes PCC 7420]
gi|196177487|gb|EDX72493.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Coleofasciculus chthonoplastes PCC 7420]
Length = 446
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 220/306 (71%), Gaps = 17/306 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRI-YNESSQKRSAGESSSCTTDGV 321
N+ P P+E+ LD+ VIGQ+ AKKVLSVAVYNHY R+ + E+ K AG
Sbjct: 77 NQIPKPRELKNYLDEHVIGQDDAKKVLSVAVYNHYKRLSFLEAKAKGKAG---------- 126
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DD VEL+KSNILL+GPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGEDVE+IL
Sbjct: 127 SDDPVELQKSNILLLGPTGCGKTLLAQTLAAVLDVPFAVADATTLTEAGYVGEDVENILL 186
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
+LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 187 RLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP 246
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP D IQIDT +ILFICGGAFV +EK I +R SIGF P +
Sbjct: 247 PQGGRKHPYQDCIQIDTGNILFICGGAFVGLEKVIEQRFGKRSIGFIQPGEGQSKEKRAA 306
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D L+ +E DL+ +G+IPEF+GR P+ + L E L+ +LT+P+NAL KQY+
Sbjct: 307 D------LLRHLEPDDLVKFGMIPEFIGRIPIAAVVDPLDEEALIAILTQPRNALVKQYQ 360
Query: 562 KMFQMN 567
K+ +M+
Sbjct: 361 KLLKMD 366
>gi|393773237|ref|ZP_10361635.1| ATP-dependent protease ATP-binding subunit ClpX [Novosphingobium
sp. Rr 2-17]
gi|392721117|gb|EIZ78584.1| ATP-dependent protease ATP-binding subunit ClpX [Novosphingobium
sp. Rr 2-17]
Length = 420
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/319 (54%), Positives = 224/319 (70%), Gaps = 33/319 (10%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
+G KDG + +P+EIC+ L+ +VIGQERAK+VLSVAV+NHY R+ + Q
Sbjct: 57 AGRKDG---------EIVSPREICETLNDYVIGQERAKRVLSVAVHNHYKRLKHSGKQ-- 105
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
VEL KSNILL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+
Sbjct: 106 ---------------GDVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTE 150
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+I+ KLL SDYNV AQQGIVYIDE+DKI++KAE+ +I+RDVSGEGVQQA
Sbjct: 151 AGYVGEDVENIILKLLQSSDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQA 210
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF ++K IS+R Q SIGFG
Sbjct: 211 LLKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRLQKRSIGFG 270
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
A V D L++ E DL+ +GLIPEFVGR PV+ +L L LV++
Sbjct: 271 AHV-------ADPDKRRVGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKI 323
Query: 549 LTEPKNALGKQYRKMFQMN 567
L EPKNAL KQY ++F++
Sbjct: 324 LKEPKNALIKQYARLFELE 342
>gi|381405441|ref|ZP_09930125.1| ATP-dependent protease ATP-binding subunit ClpX [Pantoea sp. Sc1]
gi|380738640|gb|EIB99703.1| ATP-dependent protease ATP-binding subunit ClpX [Pantoea sp. Sc1]
Length = 423
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQCEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|258625373|ref|ZP_05720270.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM603]
gi|262166051|ref|ZP_06033788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
VM223]
gi|262171084|ref|ZP_06038762.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
MB-451]
gi|449144448|ref|ZP_21775263.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
CAIM 602]
gi|258582364|gb|EEW07216.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM603]
gi|261892160|gb|EEY38146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
MB-451]
gi|262025767|gb|EEY44435.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
VM223]
gi|449079949|gb|EMB50868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
CAIM 602]
Length = 426
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 221/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N T DGV
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN-----------GDTTGDGV--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ ++
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK------DNS 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|126441050|ref|YP_001059355.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 668]
gi|126452859|ref|YP_001066626.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106a]
gi|134277221|ref|ZP_01763936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 305]
gi|162210030|ref|YP_333873.2| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710b]
gi|167719123|ref|ZP_02402359.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei DM98]
gi|167738117|ref|ZP_02410891.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 14]
gi|167815309|ref|ZP_02446989.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 91]
gi|167823711|ref|ZP_02455182.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 9]
gi|167836266|ref|ZP_02463149.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis MSMB43]
gi|167845262|ref|ZP_02470770.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei B7210]
gi|167893806|ref|ZP_02481208.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 7894]
gi|167902258|ref|ZP_02489463.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910497|ref|ZP_02497588.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 112]
gi|167918526|ref|ZP_02505617.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei BCC215]
gi|217421598|ref|ZP_03453102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 576]
gi|226197310|ref|ZP_03792887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pakistan 9]
gi|237812683|ref|YP_002897134.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei MSHR346]
gi|242316368|ref|ZP_04815384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106b]
gi|254179428|ref|ZP_04886027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1655]
gi|254189183|ref|ZP_04895694.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pasteur 52237]
gi|254197477|ref|ZP_04903899.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei S13]
gi|254260834|ref|ZP_04951888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710a]
gi|254297313|ref|ZP_04964766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 406e]
gi|386861424|ref|YP_006274373.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026b]
gi|403519054|ref|YP_006653188.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei BPC006]
gi|418382822|ref|ZP_12966748.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354a]
gi|418533695|ref|ZP_13099554.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026a]
gi|418540565|ref|ZP_13106095.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258a]
gi|418546809|ref|ZP_13112000.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258b]
gi|418553029|ref|ZP_13117870.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354e]
gi|424903789|ref|ZP_18327302.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis MSMB43]
gi|61211439|sp|Q63V40.2|CLPX_BURPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214765|sp|A3NWA5.1|CLPX_BURP0 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214766|sp|A3NAI4.1|CLPX_BURP6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126220543|gb|ABN84049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 668]
gi|126226501|gb|ABN90041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106a]
gi|134250871|gb|EBA50950.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 305]
gi|157806801|gb|EDO83971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 406e]
gi|157936862|gb|EDO92532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pasteur 52237]
gi|169654218|gb|EDS86911.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei S13]
gi|184209968|gb|EDU07011.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1655]
gi|217395340|gb|EEC35358.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 576]
gi|225930689|gb|EEH26699.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pakistan 9]
gi|237506116|gb|ACQ98434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei MSHR346]
gi|242139607|gb|EES26009.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106b]
gi|254219523|gb|EET08907.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710a]
gi|385360655|gb|EIF66569.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026a]
gi|385361175|gb|EIF67067.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258a]
gi|385362935|gb|EIF68725.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258b]
gi|385372145|gb|EIF77270.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354e]
gi|385376977|gb|EIF81605.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354a]
gi|385658552|gb|AFI65975.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026b]
gi|390931662|gb|EIP89063.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis MSMB43]
gi|403074697|gb|AFR16277.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei BPC006]
Length = 423
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 222/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 66 LPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE----RDA- 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY+K+F
Sbjct: 284 --GEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLF 341
Query: 565 QMN 567
M
Sbjct: 342 AME 344
>gi|437763920|ref|ZP_20834984.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|435308366|gb|ELO83329.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
Length = 358
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|410627459|ref|ZP_11338198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
mesophila KMM 241]
gi|410152951|dbj|GAC24967.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
mesophila KMM 241]
Length = 425
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 220/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTPKEI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HDGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFG ++ + +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIKDS------S 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L++ VE DL+ YGLIPEF+GR PVL SL L+E L+Q+L EPKN+L KQY
Sbjct: 280 NKSKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSLTKQYA 339
Query: 562 KMFQMN 567
+F +
Sbjct: 340 ALFSLE 345
>gi|420238691|ref|ZP_14743074.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF080]
gi|398085331|gb|EJL75991.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF080]
Length = 425
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 229/304 (75%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ++AK++LSVAV+NHY R+ + S G D
Sbjct: 67 PTPQDIIKVLDEYVIGQKQAKRILSVAVHNHYKRLAHASK--------------GGD--- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V++ + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGASVKSAEDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|307261755|ref|ZP_07543421.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868573|gb|EFN00384.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 419
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 221/304 (72%), Gaps = 20/304 (6%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EI LD++VIGQE AKKVLSVAVYNHY R+ N S + T+GV
Sbjct: 65 PTPHEINAHLDEYVIGQEHAKKVLSVAVYNHYKRLRNALSGHKE--------TNGV---- 112
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLTQAGYVGEDVE+++ KLL
Sbjct: 113 -ELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLM 171
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
D++ A++GIV+IDE+DKIT+K+ES +I+RDVSGEGVQQALLK++EGTV N+ +G+
Sbjct: 172 KCDFDAEQAERGIVFIDEIDKITRKSESPSITRDVSGEGVQQALLKLIEGTVANINPQGS 231
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+G+ I +DT ILFICGGAF ++K + R + IGFGA ++ + +T+
Sbjct: 232 RKHPKGETIPVDTSKILFICGGAFAGLDKIVEARSNKQGGIGFGAELKKDKEREDLTE-- 289
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L + VE DL+ +GLIPE +GR PV+ L L E L+Q+LTEPKNA+ KQY+ +F
Sbjct: 290 ----LFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPKNAIIKQYQALF 345
Query: 565 QMNG 568
QM G
Sbjct: 346 QMEG 349
>gi|292670225|ref|ZP_06603651.1| ATP-dependent Clp protease ATP-binding subunit [Selenomonas noxia
ATCC 43541]
gi|292648177|gb|EFF66149.1| ATP-dependent Clp protease ATP-binding subunit [Selenomonas noxia
ATCC 43541]
Length = 421
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 224/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI LD++VIGQ+ AKK LSVAVYNHY RI +AG++ ++
Sbjct: 61 IPKPKEIRHILDQYVIGQDEAKKSLSVAVYNHYKRI--------NAGQNK--------NE 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 DVELRKSNILMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 165 QAADYDIEKAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +QIDT +ILFICGGAF IE+ I R +GFGA VR+ R V
Sbjct: 225 GRKHPQQELLQIDTTNILFICGGAFDGIEEIIESRLGKKQMGFGAQVRSKKR-------V 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+L+ V DL+ GLIPEF+GR PV+V+L +L E LV++LTEPKNAL KQ++K+
Sbjct: 278 TVGALLSKVIPEDLMKNGLIPEFIGRLPVVVTLNSLDEKALVRILTEPKNALVKQFQKLL 337
Query: 565 QMNG 568
+++G
Sbjct: 338 ELDG 341
>gi|440226209|ref|YP_007333300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
tropici CIAT 899]
gi|440037720|gb|AGB70754.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
tropici CIAT 899]
Length = 425
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 226/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S +
Sbjct: 67 PTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASK-----------------NGD 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNI+L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V+A + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L + L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDADALIQILSEPKNALVKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|359790767|ref|ZP_09293648.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253255|gb|EHK56410.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 422
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 225/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD +VIGQ AK+VLSVAV+NHY R+ + S ++
Sbjct: 66 PTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHASK-----------------NND 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS+R + +SIGF A V + + R+G V
Sbjct: 229 RKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFSATVASPEDRRSGEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
VE DL+ +GLIPEFVGR PVL +L L E L+Q+LTEPKNAL KQY+++
Sbjct: 286 ------FRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQRL 339
Query: 564 FQMN 567
F+M
Sbjct: 340 FEME 343
>gi|304395500|ref|ZP_07377383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea sp.
aB]
gi|308185909|ref|YP_003930040.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pantoea vagans
C9-1]
gi|440758261|ref|ZP_20937432.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea
agglomerans 299R]
gi|304356794|gb|EFM21158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea sp.
aB]
gi|308056419|gb|ADO08591.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pantoea vagans
C9-1]
gi|436428045|gb|ELP25711.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea
agglomerans 299R]
Length = 423
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQCEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|307544937|ref|YP_003897416.1| ATP-dependent protease ATP-binding subunit [Halomonas elongata DSM
2581]
gi|307216961|emb|CBV42231.1| ATP-dependent protease ATP-binding subunit [Halomonas elongata DSM
2581]
Length = 425
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 218/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P+EI LD +VIGQ+RAK VLSVAVYNHY R+ +
Sbjct: 63 ERLPAPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRLRYGAK----------------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP
Sbjct: 165 LLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTAQVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT ++LFI GGAF ++K I +R + IGF A V+ GV D
Sbjct: 225 QGGRKHPQQEFLQVDTTNMLFIVGGAFAGLDKVIRDRAEKGGIGFNAEVKTKDETKGVGD 284
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DL+ +GLIPEFVGR PV+ +L LTE+ L+Q+LTEPKN+L KQY +
Sbjct: 285 ------LLLDVEPEDLVKFGLIPEFVGRLPVIATLTELTEDALIQILTEPKNSLIKQYAR 338
Query: 563 MFQMNG 568
+F M G
Sbjct: 339 LFDMEG 344
>gi|254488366|ref|ZP_05101571.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. GAI101]
gi|214045235|gb|EEB85873.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. GAI101]
Length = 421
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 225/302 (74%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+IC LD +VIGQ AKKVLSVAV+NHY R+ + +QK G D
Sbjct: 64 PTPKDICDVLDDYVIGQAMAKKVLSVAVHNHYKRLNH--AQK------------GGD--- 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ I+ R + S++GFGA VR DA
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAARGKGSAMGFGADVRDK-------DARG 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DL+ +GLIPEFVGR PVL +L L E+ LV +LT+PKNAL KQY+++F+
Sbjct: 280 IGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNALVKQYQRLFE 339
Query: 566 MN 567
+
Sbjct: 340 IE 341
>gi|307129928|ref|YP_003881944.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Dickeya dadantii 3937]
gi|306527457|gb|ADM97387.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Dickeya dadantii 3937]
Length = 424
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 224/306 (73%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G ++
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRN-----------------GDSNN 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
++EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 SIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS--SIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I E+R D+ IGF A V+ G++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK------GLSQ 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI +GLIPEF+GR PV+ +L L E L+Q+L EPKNAL KQY+
Sbjct: 280 KATEGELLSQVEPGDLIKFGLIPEFIGRLPVVATLKELDEEALIQILREPKNALTKQYQA 339
Query: 563 MFQMNG 568
+F++ G
Sbjct: 340 LFKLEG 345
>gi|156935009|ref|YP_001438925.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ATCC BAA-894]
gi|389841945|ref|YP_006344029.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ES15]
gi|417791994|ref|ZP_12439406.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii E899]
gi|424798414|ref|ZP_18223956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 696]
gi|429089533|ref|ZP_19152265.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
universalis NCTC 9529]
gi|429092458|ref|ZP_19155086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 1210]
gi|429107668|ref|ZP_19169537.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 681]
gi|429109246|ref|ZP_19171016.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 507]
gi|429114394|ref|ZP_19175312.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 701]
gi|429122486|ref|ZP_19183063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 680]
gi|449309235|ref|YP_007441591.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii SP291]
gi|166214776|sp|A7MFI7.1|CLPX_ENTS8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|156533263|gb|ABU78089.1| hypothetical protein ESA_02860 [Cronobacter sakazakii ATCC BAA-894]
gi|333953882|gb|EGL71772.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii E899]
gi|387852421|gb|AFK00519.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ES15]
gi|423234135|emb|CCK05826.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 696]
gi|426294391|emb|CCJ95650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 681]
gi|426310403|emb|CCJ97129.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 507]
gi|426317523|emb|CCK01425.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 701]
gi|426322954|emb|CCK13800.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 680]
gi|426509336|emb|CCK17377.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
universalis NCTC 9529]
gi|426742657|emb|CCJ81199.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 1210]
gi|449099268|gb|AGE87302.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii SP291]
Length = 424
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|109899440|ref|YP_662695.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
atlantica T6c]
gi|123170858|sp|Q15R47.1|CLPX_PSEA6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|109701721|gb|ABG41641.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas atlantica T6c]
Length = 425
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 220/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTPKEI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HDGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFG ++ + +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIKDS------S 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L++ VE DL+ YGLIPEF+GR PVL SL L+E L+Q+L EPKN+L KQY
Sbjct: 280 NKSKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSLTKQYA 339
Query: 562 KMFQMN 567
+F +
Sbjct: 340 ALFSLE 345
>gi|161504374|ref|YP_001571486.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980]
gi|339998421|ref|YP_004729304.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
bongori NCTC 12419]
gi|189044147|sp|A9MM22.1|CLPX_SALAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|160865721|gb|ABX22344.1| hypothetical protein SARI_02485 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|339511782|emb|CCC29491.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
bongori NCTC 12419]
Length = 423
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRIHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|87121307|ref|ZP_01077197.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinomonas
sp. MED121]
gi|86163464|gb|EAQ64739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinomonas
sp. MED121]
Length = 425
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/310 (54%), Positives = 227/310 (73%), Gaps = 23/310 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
S ++ P P ++ LD++VIGQE+AK+VL+VAVYNHY R+ ++ T
Sbjct: 62 SEESDELPAPAKLKFALDEYVIGQEKAKRVLAVAVYNHYKRLKHQGK------------T 109
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
DGV EL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+
Sbjct: 110 DGV-----ELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVEN 164
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 165 IIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 224
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP+ + +Q+DT +ILFICGGAF +++ IS+R + SIGF A V++
Sbjct: 225 SVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDRVISDRTEKGSIGFSAVVKSKEEDK 284
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+D V VE+ DL+ +GLIPEFVGR PV+ +L L E L+ +L+EPKNAL K
Sbjct: 285 VFSDTV------HNVETEDLVKFGLIPEFVGRLPVVATLSELDEEALITILSEPKNALTK 338
Query: 559 QYRKMFQMNG 568
QY+ +F++ G
Sbjct: 339 QYQHLFELEG 348
>gi|387771175|ref|ZP_10127341.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pasteurella
bettyae CCUG 2042]
gi|386902380|gb|EIJ67220.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pasteurella
bettyae CCUG 2042]
Length = 411
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
K PTP EI LD +VIGQE AKKVLSVAVYNHY R+ +++G+
Sbjct: 59 EKLPTPHEIRAHLDDYVIGQEYAKKVLSVAVYNHYKRLR---------------SSNGIG 103
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+T+AR +NVPF +ADATTLT+AGYVGEDVE+++ K
Sbjct: 104 D--VELGKSNILLIGPTGSGKTLLAETMARMLNVPFAMADATTLTEAGYVGEDVENVIQK 161
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +YN AQQGI+YIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGTV ++P
Sbjct: 162 LLQNCEYNTEKAQQGIIYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPP 221
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +++DT ILFICGGAF +++ + +R + S IGF A V+ +T
Sbjct: 222 QGGRKHPQQEMLRVDTSKILFICGGAFAGLDRVVQKRIYKGSGIGFDAEVKGEADEASLT 281
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D L + +E+ DLI YGLIPEF+GR PV+ L L EN L+Q+LTEPKNAL KQY+
Sbjct: 282 D------LFKQIETEDLIKYGLIPEFIGRLPVVAPLSELDENALIQILTEPKNALTKQYQ 335
Query: 562 KMFQMN 567
+F +
Sbjct: 336 ALFSLE 341
>gi|365969262|ref|YP_004950823.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae EcWSU1]
gi|365748175|gb|AEW72402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae EcWSU1]
Length = 400
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 225/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 40 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 82
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 83 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 142
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 143 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 202
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A+ ++
Sbjct: 203 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAS------SEK 256
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 257 PNEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQAL 316
Query: 564 FQMNG 568
F + G
Sbjct: 317 FNLEG 321
>gi|348026430|ref|YP_004766235.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megasphaera
elsdenii DSM 20460]
gi|341822484|emb|CCC73408.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megasphaera
elsdenii DSM 20460]
Length = 412
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 218/303 (71%), Gaps = 22/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD++VIGQE AKK LSVAVYNHY R+ S DD
Sbjct: 59 LPTPHEIKATLDEYVIGQEAAKKTLSVAVYNHYKRLQTNFS---------------ASDD 103
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNI+++GPTGSGKTLLA+TLAR ++VPF IADAT+LT+AGYVGEDVE+ L KL+
Sbjct: 104 DVELQKSNIVMVGPTGSGKTLLAQTLARLLDVPFAIADATSLTEAGYVGEDVENCLLKLI 163
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++A A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV VP +G
Sbjct: 164 QAADYDIAKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAGVPPQG 223
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + +QIDT +ILFICGGAF I+KTI R D ++GFGA + +
Sbjct: 224 GRKHPHQEMLQIDTTNILFICGGAFDGIDKTILNRTTDKNMGFGADIHSKSEHS------ 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
SL++ + +DL +GLIPE +GR PVLV+L L E+ +V +LTEPKNAL KQY+KM
Sbjct: 278 -MESLLKEIIPTDLQKFGLIPELIGRLPVLVTLNPLDEDAMVHILTEPKNALVKQYQKML 336
Query: 565 QMN 567
M+
Sbjct: 337 SMD 339
>gi|147677140|ref|YP_001211355.1| ATP-dependent protease ATP-binding subunit ClpX [Pelotomaculum
thermopropionicum SI]
gi|146273237|dbj|BAF58986.1| ATP-dependent protease Clp, ATPase subunit [Pelotomaculum
thermopropionicum SI]
Length = 427
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 221/304 (72%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQE AKK L+VAVYNHY RI G D
Sbjct: 69 IPKPKEIKEILDQYVIGQESAKKSLAVAVYNHYKRI-----------------NLGGKID 111
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNI+++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 112 DVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENILLKLI 171
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 172 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 231
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQ+DT +ILFICGGAF IEK I R ++GFGA ++A +
Sbjct: 232 GRKHPHQEFIQLDTTNILFICGGAFDGIEKIIMNRIGKKAMGFGAEIKARKE-------L 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ + DL+ YGLIPEFVGR P++V+L AL E L+++LTEP+NAL KQY K+F
Sbjct: 285 KIGEILSKILPEDLLKYGLIPEFVGRLPIIVTLDALDEEALIRILTEPRNALVKQYEKLF 344
Query: 565 QMNG 568
+++G
Sbjct: 345 ELDG 348
>gi|378578413|ref|ZP_09827088.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Pantoea stewartii subsp. stewartii DC283]
gi|377818693|gb|EHU01774.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Pantoea stewartii subsp. stewartii DC283]
Length = 423
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS+R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLAQCEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|395780055|ref|ZP_10460522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis 085-0475]
gi|395419322|gb|EJF85622.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis 085-0475]
Length = 424
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/315 (53%), Positives = 227/315 (72%), Gaps = 25/315 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 66 PTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKS-----------------ND 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA-------PDERC 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DLI +GLIPEF+GR P++ +L L N LVQ+L++PKNAL KQY+++F+
Sbjct: 282 VGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFE 341
Query: 566 M-NGQAAFYGKCFEI 579
M N + AF+ +
Sbjct: 342 MENVELAFHEDALRV 356
>gi|338999444|ref|ZP_08638087.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
TD01]
gi|338763593|gb|EGP18582.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
TD01]
Length = 426
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 221/305 (72%), Gaps = 23/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTP+EI LD +VIGQ+RAK VLSVAVYNHY R+ E V
Sbjct: 63 ERLPTPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRLKTE-----------------VR 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 EGDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP
Sbjct: 166 LLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q++T +ILFI GGAF ++K I +R + IGF A V++ + GV
Sbjct: 226 QGGRKHPQQEFVQVNTANILFIVGGAFAGLDKVIRDRAEKGGIGFNASVKSKESSRGV-- 283
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DL+ +GLIPEFVGR PV+ +L L E+ LVQ+LTEPKN+L KQY K
Sbjct: 284 ----GELLADVEPDDLVKFGLIPEFVGRLPVIATLTELNEDALVQILTEPKNSLVKQYAK 339
Query: 563 MFQMN 567
+F+M
Sbjct: 340 LFEME 344
>gi|392554153|ref|ZP_10301290.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
undina NCIMB 2128]
Length = 427
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/312 (55%), Positives = 226/312 (72%), Gaps = 30/312 (9%)
Query: 260 NLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTD 319
+ +K P PKEI LD +VIGQE AKKVLSVAVYNHY R+ N+S+++
Sbjct: 62 DAADKLPVPKEIRNHLDDYVIGQEHAKKVLSVAVYNHYKRLRNQSTKQ------------ 109
Query: 320 GVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 110 -----DVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENI 164
Query: 380 LYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +
Sbjct: 165 IQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 224
Query: 440 VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAG 498
VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFG V+
Sbjct: 225 VPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSHKNTGIGFGVNVK------ 278
Query: 499 GVTDAVVTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
++ + SL ET VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNA
Sbjct: 279 ---ESAASRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALVQILSEPKNA 335
Query: 556 LGKQYRKMFQMN 567
+ KQ+ +F M
Sbjct: 336 ITKQFSVLFGME 347
>gi|330469648|ref|YP_004407391.1| ATP-dependent protease ATP-binding subunit ClpX [Verrucosispora
maris AB-18-032]
gi|328812619|gb|AEB46791.1| ATP-dependent protease ATP-binding subunit ClpX [Verrucosispora
maris AB-18-032]
Length = 431
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/306 (54%), Positives = 219/306 (71%), Gaps = 18/306 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EIC+ LD +V+GQE+AKK L+VAVYNHY RI E++ AG
Sbjct: 59 EELPKPMEICQFLDTYVVGQEQAKKALAVAVYNHYKRIQAEAANAPGAG----------- 107
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D VEL KSNILL+GPTG GKT LA+TLAR +NVPF IADAT LT+AGYVGEDVE+IL K
Sbjct: 108 NDGVELAKSNILLLGPTGCGKTHLAQTLARMLNVPFAIADATALTEAGYVGEDVENILLK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
L+ +DY++ A+ GI+YIDEVDKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 168 LIQAADYDIKRAETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQIDT ++LFICGGAF +++ I R GFGA +RA
Sbjct: 228 QGGRKHPHQEFIQIDTTNVLFICGGAFAGLDQIIEARTGHGGTGFGARLRA-------VS 280
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
T + V D++ +GLIPEF+GR PV+ S+ +L + LV++LTEP+NAL +QY++
Sbjct: 281 ERSTDDIFGQVMPEDMLKFGLIPEFIGRLPVITSVRSLDRSALVRILTEPRNALVRQYQR 340
Query: 563 MFQMNG 568
+F+++G
Sbjct: 341 LFELDG 346
>gi|260596810|ref|YP_003209381.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
turicensis z3032]
gi|429102779|ref|ZP_19164753.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
turicensis 564]
gi|260215987|emb|CBA28640.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cronobacter
turicensis z3032]
gi|426289428|emb|CCJ90866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
turicensis 564]
Length = 424
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|254556941|ref|YP_003063358.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
plantarum JDM1]
gi|300768256|ref|ZP_07078161.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180930|ref|YP_003925058.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|380032875|ref|YP_004889866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum WCFS1]
gi|418275671|ref|ZP_12890994.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448821642|ref|YP_007414804.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum ZJ316]
gi|38257506|sp|Q88VE2.1|CLPX_LACPL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254045868|gb|ACT62661.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
JDM1]
gi|300494320|gb|EFK29483.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046421|gb|ADN98964.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|342242118|emb|CCC79352.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum WCFS1]
gi|376009222|gb|EHS82551.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448275139|gb|AGE39658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum ZJ316]
Length = 421
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 222/304 (73%), Gaps = 17/304 (5%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEI LD++VIGQ AK+ LSVAVYNHY R+ ++ ++ T DG
Sbjct: 61 IPTPKEIVDELDQYVIGQNEAKRTLSVAVYNHYKRV-------KAMADNDEETEDGP--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL+KSNI L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 111 --ELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 169 QNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + IQIDT +ILFI GGAF IE + R D +IGFG V D
Sbjct: 229 GRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTDTDGK---NAVLDD- 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ SLM+ V DL+ +GLIPEF+GR P+L +L LTE+ LV++LTEPKNAL KQY+++
Sbjct: 285 -SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNALVKQYQRLI 343
Query: 565 QMNG 568
++G
Sbjct: 344 ALDG 347
>gi|429099392|ref|ZP_19161498.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 582]
gi|426285732|emb|CCJ87611.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 582]
Length = 428
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|239907452|ref|YP_002954193.1| ATP-dependent protease ATP-binding subunit ClpX [Desulfovibrio
magneticus RS-1]
gi|239797318|dbj|BAH76307.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Desulfovibrio
magneticus RS-1]
Length = 417
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 227/306 (74%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G K P EI + LD++VIGQE+AKK+L+VAV+NHY R+Y S G
Sbjct: 58 GGKLLPPAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAGSA-------------GA 104
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DD VE++KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL
Sbjct: 105 DD--VEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILV 162
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
+LL +DY++ +A +GI+YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 163 QLLQNADYDIESASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIP 222
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
KG RKHP+ + I+++T +ILFI GGAF+ ++K + +R++ S++GFGA V A
Sbjct: 223 PKGGRKHPQQEFIRLNTANILFIVGGAFIGLDKIVGQRQRGSAMGFGAKVEAKSDDD--- 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S L+ +DLI +GLIPEFVGR P+L SL LT+ LV++LTEPKNAL KQY+
Sbjct: 280 ----LSKLLTQAHPADLIKFGLIPEFVGRIPILTSLEELTQTDLVRILTEPKNALVKQYQ 335
Query: 562 KMFQMN 567
K+F+++
Sbjct: 336 KLFELD 341
>gi|76581159|gb|ABA50634.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710b]
Length = 466
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 222/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 109 LPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 151
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 152 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 211
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 212 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 271
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++ DA
Sbjct: 272 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE----RDA- 326
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY+K+F
Sbjct: 327 --GEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLF 384
Query: 565 QMN 567
M
Sbjct: 385 AME 387
>gi|312882506|ref|ZP_07742247.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309369906|gb|EFP97417.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 427
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 221/304 (72%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S D
Sbjct: 65 LPVPREIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKDETKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTKVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|395232658|ref|ZP_10410908.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter sp.
Ag1]
gi|394733060|gb|EJF32699.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter sp.
Ag1]
Length = 424
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N S T++GV
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN------------SDTSNGV--- 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 --ELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGQLLGQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|225075808|ref|ZP_03719007.1| hypothetical protein NEIFLAOT_00824 [Neisseria flavescens
NRL30031/H210]
gi|224952841|gb|EEG34050.1| hypothetical protein NEIFLAOT_00824 [Neisseria flavescens
NRL30031/H210]
Length = 421
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 219/308 (71%), Gaps = 23/308 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
N K PTP EI L+ VIGQE AKK L+V+VYNHY R+ + ++ +
Sbjct: 59 ENTEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRHPKAEGK---------- 108
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE
Sbjct: 109 -------VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ 161
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 162 IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP + I +DT +ILFICGGAF +EK I +R + IGFGA V +
Sbjct: 222 SVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENA 281
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+ S+L ETVE DLI +GLIPE +GR PV+ +L L E+ LV +LTEPKNAL K
Sbjct: 282 DI------SALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVK 335
Query: 559 QYRKMFQM 566
QY+ +F+M
Sbjct: 336 QYQTLFEM 343
>gi|167562415|ref|ZP_02355331.1| ATP-dependent protease ATP-binding subunit [Burkholderia
oklahomensis EO147]
gi|167569598|ref|ZP_02362472.1| ATP-dependent protease ATP-binding subunit [Burkholderia
oklahomensis C6786]
Length = 423
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 222/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 66 LPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE----RDA- 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY+K+F
Sbjct: 284 --GEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLF 341
Query: 565 QMN 567
M
Sbjct: 342 AME 344
>gi|260887081|ref|ZP_05898344.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sputigena ATCC 35185]
gi|330839142|ref|YP_004413722.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sputigena ATCC 35185]
gi|260863143|gb|EEX77643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sputigena ATCC 35185]
gi|329746906|gb|AEC00263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sputigena ATCC 35185]
Length = 425
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 223/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQE AKK LSVAVYNHY RI R+ G++ D
Sbjct: 61 VPKPKEIRQILDQYVIGQEEAKKSLSVAVYNHYKRI------NRTQGKA----------D 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNIL++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 EVELQKSNILMIGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 165 QAADYDVEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILF+CGGAF IEK I R ++GFGA + + +
Sbjct: 225 GRKHPHQELIQIDTTNILFLCGGAFDGIEKIIEARLGKKNMGFGAEIESKVERN------ 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + DL+ GLIPEF+GR P++V+L AL E+ LV++LTEPKNAL KQY+K+
Sbjct: 279 -IGETLRHILPEDLLKNGLIPEFIGRLPIVVTLEALGEDTLVRILTEPKNALVKQYQKLL 337
Query: 565 QMNG 568
+M+G
Sbjct: 338 EMDG 341
>gi|18310374|ref|NP_562308.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens str. 13]
gi|110800496|ref|YP_696087.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens ATCC 13124]
gi|168207807|ref|ZP_02633812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens E str. JGS1987]
gi|168212103|ref|ZP_02637728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens B str. ATCC 3626]
gi|168215326|ref|ZP_02640951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens CPE str. F4969]
gi|168217823|ref|ZP_02643448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens NCTC 8239]
gi|169342285|ref|ZP_02863363.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens C str. JGS1495]
gi|422346058|ref|ZP_16426972.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
perfringens WAL-14572]
gi|422874316|ref|ZP_16920801.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens F262]
gi|21263462|sp|Q8XKK2.1|CLPX_CLOPE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123148746|sp|Q0TQK3.1|CLPX_CLOP1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|18145054|dbj|BAB81098.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
perfringens str. 13]
gi|110675143|gb|ABG84130.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens ATCC 13124]
gi|169299612|gb|EDS81671.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens C str. JGS1495]
gi|170660869|gb|EDT13552.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens E str. JGS1987]
gi|170709985|gb|EDT22167.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens B str. ATCC 3626]
gi|170713288|gb|EDT25470.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens CPE str. F4969]
gi|182380170|gb|EDT77649.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens NCTC 8239]
gi|373226680|gb|EHP49002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
perfringens WAL-14572]
gi|380304793|gb|EIA17079.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens F262]
Length = 435
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 220/303 (72%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI LD++V+GQ+RAKK L+VAVYNHY RI ++ D
Sbjct: 63 LPKPQEIKDYLDQYVVGQDRAKKSLAVAVYNHYKRINANKAE-----------------D 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLI 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 166 QNADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQI+T +ILFICGGAF I+K I +R SSIGFGA V+
Sbjct: 226 GRKHPHQEFIQINTSNILFICGGAFDGIDKIIEKRGTKSSIGFGAEVKGKSEKN------ 279
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L++ + DL+ +GLIPEFVGR PVLV+L AL LV +LT+PKNAL KQY+K+F
Sbjct: 280 -VGELLKDIMPGDLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLF 338
Query: 565 QMN 567
+++
Sbjct: 339 ELD 341
>gi|255321157|ref|ZP_05362323.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SK82]
gi|421855045|ref|ZP_16287427.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255301711|gb|EET80962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SK82]
gi|403189545|dbj|GAB73628.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 438
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/314 (53%), Positives = 225/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ + +++
Sbjct: 53 GDWASRPL----PKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRLKVSQNGQKT---- 104
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 105 ---------EDKVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY++ AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIVQKLLQKADYDIEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQ+DT ++LFICGGAF +EK + R++ IGF A V++
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQVDTSNVLFICGGAFSGLEKIVQHRQEKGGIGFTAEVKS 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + L VE +DL+ +GLIPEF+GR PV+ +L L E+ L+Q+LTEPK
Sbjct: 276 KDETKKLAE------LFRQVEPADLVKFGLIPEFIGRLPVIATLEELDEDALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 330 NALTRQYQYLFNME 343
>gi|395789945|ref|ZP_10469453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
taylorii 8TBB]
gi|395428167|gb|EJF94249.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
taylorii 8TBB]
Length = 424
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/315 (53%), Positives = 227/315 (72%), Gaps = 25/315 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 66 PTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKS-----------------ND 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA-------PDERC 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DLI +GLIPEF+GR P++ +L L N LVQ+L++PKNAL KQY+++F+
Sbjct: 282 VGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFE 341
Query: 566 M-NGQAAFYGKCFEI 579
M N + AF+ +
Sbjct: 342 MENVELAFHEDALRV 356
>gi|395778318|ref|ZP_10458830.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae Re6043vi]
gi|395417526|gb|EJF83863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae Re6043vi]
Length = 424
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/317 (53%), Positives = 231/317 (72%), Gaps = 25/317 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + + PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 58 GVKVRDGVPTPQEIISVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSK-----------S 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+D +EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 107 SD------IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVE 160
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL +DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 161 NIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTI 220
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A
Sbjct: 221 ASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA---- 276
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
D + +E DLI +GLIPEF+GR P++ +L L N LVQ+L++PKNAL
Sbjct: 277 ---PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDINALVQILSQPKNALV 333
Query: 558 KQYRKMFQM-NGQAAFY 573
KQY+++F+M N + AF+
Sbjct: 334 KQYQRLFEMENVELAFH 350
>gi|350530715|ref|ZP_08909656.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
rotiferianus DAT722]
Length = 426
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 222/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFMQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|402549259|ref|ZP_10846112.1| ATP-dependent protease ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86C]
Length = 366
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 225/305 (73%), Gaps = 23/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P+P EI LD++VIGQE AKKVLSVAVYNHY R+ +++
Sbjct: 58 DELPSPLEIFNKLDEYVIGQESAKKVLSVAVYNHYKRLRKNNAK---------------- 101
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DTVEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 102 -DTVELQKSNVLLLGPTGSGKTLLAQTLAKILNVPFTIADATTLTEAGYVGEDVENIIQK 160
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL SDY+ AQ GIVYIDE+DKI +K+++ +I+RDVSGEGVQQALLK++EGTV ++P
Sbjct: 161 LLQKSDYDPERAQLGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTVASIPP 220
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + IQIDT +ILFICGGAF ++K I +R + IGFGA V ++
Sbjct: 221 QGGRKHPQQEFIQIDTSNILFICGGAFSGLDKVIDQRNSNIGIGFGAEVNKK------SN 274
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ +S ++ +E DL+ YGLIPEFVGR PV+ SL L E+ LV++L EPKNAL QY+
Sbjct: 275 VLPITSNVDDLEPEDLVKYGLIPEFVGRLPVISSLHELDEHALVRILKEPKNALVNQYKH 334
Query: 563 MFQMN 567
+F+++
Sbjct: 335 LFEID 339
>gi|207855929|ref|YP_002242580.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|436653599|ref|ZP_20516816.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE30663]
gi|436797183|ref|ZP_20523129.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|437323567|ref|ZP_20739301.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 17927]
gi|437338517|ref|ZP_20743722.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS4]
gi|445246810|ref|ZP_21408350.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|445337410|ref|ZP_21415967.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|238690386|sp|B5QTJ7.1|CLPX_SALEP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|206707732|emb|CAR32017.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|434961255|gb|ELL54573.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|435025337|gb|ELM15493.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE30663]
gi|435194618|gb|ELN79046.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 17927]
gi|435195908|gb|ELN80264.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS4]
gi|444873410|gb|ELX97707.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444890254|gb|ELY13607.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
Length = 423
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL++AVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLALAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|296101560|ref|YP_003611706.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295056019|gb|ADF60757.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 424
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ANEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|421745791|ref|ZP_16183629.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
necator HPC(L)]
gi|409775705|gb|EKN57163.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
necator HPC(L)]
Length = 424
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 218/304 (71%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + + D
Sbjct: 67 LPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK-----------------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +Q+DT +ILFICGGAF +EK I +R + IGFGA V++
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFGAQVQSKEERD------ 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S ++ E DLI +GLIPE +GR PV+ +L L E LVQ+L EPKNAL KQY+K+
Sbjct: 284 -VSEVLPQTEPEDLIKFGLIPELIGRLPVVATLSKLDEAALVQILIEPKNALVKQYQKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|346310668|ref|ZP_08852682.1| ATP-dependent Clp protease [Collinsella tanakaei YIT 12063]
gi|345897302|gb|EGX67225.1| ATP-dependent Clp protease [Collinsella tanakaei YIT 12063]
Length = 470
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 225/314 (71%), Gaps = 10/314 (3%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC- 316
S+L + PTP EI L ++V+GQE AK+ +SVAVYNHY R+ S+ + A SS
Sbjct: 88 ASSLIRRVPTPHEIYDELSQYVMGQEDAKRAMSVAVYNHYRRVLEGSTAQTDASSFSSLG 147
Query: 317 --TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGE 374
D D + VEL KSNILL+GPTG+GKTLLA+TLAR + VPF IADAT LT+AGYVGE
Sbjct: 148 KHANDADDLEGVELAKSNILLLGPTGTGKTLLAQTLARILEVPFAIADATALTEAGYVGE 207
Query: 375 DVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 434
DVE+IL KL+ +D ++ AQ GI+Y+DE+DKI +KAE+L+I+RDVSGEGVQQALLK+LE
Sbjct: 208 DVENILLKLINAADGDIGRAQIGIIYVDEIDKIARKAENLSITRDVSGEGVQQALLKILE 267
Query: 435 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRAN 494
GTV +VP G RKHP+ + +QIDT +ILFICGGAFV ++K +S+R + +GF N
Sbjct: 268 GTVASVPPTGGRKHPQQELLQIDTTNILFICGGAFVGLDKIVSDRVGNKGVGF------N 321
Query: 495 MRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKN 554
G T A + L+ V DL A+G+IPEF+GR PV+ AL E+ LVQ+LT P+N
Sbjct: 322 SEIAGPTSA-DENDLLRQVLPQDLNAFGMIPEFIGRTPVITQTQALDEDDLVQILTGPRN 380
Query: 555 ALGKQYRKMFQMNG 568
A+ KQYR+MFQ+ G
Sbjct: 381 AITKQYRRMFQLEG 394
>gi|110803718|ref|YP_698703.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens SM101]
gi|123341787|sp|Q0ST54.1|CLPX_CLOPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110684219|gb|ABG87589.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens SM101]
Length = 435
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 220/303 (72%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI LD++V+GQ+RAKK L+VAVYNHY RI ++ D
Sbjct: 63 LPKPQEIKDYLDQYVVGQDRAKKSLAVAVYNHYKRINANKAE-----------------D 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLI 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 166 QNADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQI+T +ILFICGGAF I+K I +R SSIGFGA V+
Sbjct: 226 GRKHPHQEFIQINTSNILFICGGAFDGIDKIIEKRGTKSSIGFGAEVKGKSEKN------ 279
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L++ + DL+ +GLIPEFVGR PVLV+L AL LV +LT+PKNAL KQY+K+F
Sbjct: 280 -VGELLKDIMPGDLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLF 338
Query: 565 QMN 567
+++
Sbjct: 339 ELD 341
>gi|53802552|ref|YP_112778.1| ATP-dependent protease ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
gi|61211760|sp|Q60C67.1|CLPX1_METCA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX 1
gi|53756313|gb|AAU90604.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
Length = 422
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 223/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKE+ LD++VIGQ++AK++LSVAVYNHY R+ + + +
Sbjct: 64 LPKPKEMKAILDQYVIGQDKAKRILSVAVYNHYKRLKARTFR-----------------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELAKSNVLLIGPTGSGKTLLAETLARVLDVPFTIADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V A+QGIVYIDE+DKI++KA+S +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 LACDYDVEKAEQGIVYIDEIDKISRKADSPSITRDVSGEGVQQALLKLMEGTVASVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q++T +ILFICGGAF ++KTI R + S IGF A V++ V +
Sbjct: 227 GRKHPQQEFLQVNTANILFICGGAFAGLDKTIRSRSERSGIGFSAEVKSKEENTNVGE-- 284
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE+ DLI YGLIPEF+GR PV+ +L L E LV++L EPKNAL KQY ++F
Sbjct: 285 ----ILAGVEAEDLIRYGLIPEFIGRLPVVATLEELDEAALVRILIEPKNALVKQYARLF 340
Query: 565 QMNG 568
+M G
Sbjct: 341 EMEG 344
>gi|182627118|ref|ZP_02954836.1| HesB-like domain protein [Clostridium perfringens D str. JGS1721]
gi|177907507|gb|EDT70165.1| HesB-like domain protein [Clostridium perfringens D str. JGS1721]
Length = 435
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 220/303 (72%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI LD++V+GQ+RAKK L+VAVYNHY RI ++ D
Sbjct: 63 LPKPQEIKDYLDQYVVGQDRAKKSLAVAVYNHYKRINANKAE-----------------D 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLI 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 166 QNADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQI+T +ILFICGGAF I+K I +R SSIGFGA V+
Sbjct: 226 GRKHPHQEFIQINTSNILFICGGAFDGIDKIIEKRGTKSSIGFGAEVKGKSEKN------ 279
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L++ + DL+ +GLIPEFVGR PVLV+L AL LV +LT+PKNAL KQY+K+F
Sbjct: 280 -VGELLKDIMPGDLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLF 338
Query: 565 QMN 567
+++
Sbjct: 339 ELD 341
>gi|261379792|ref|ZP_05984365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
subflava NJ9703]
gi|284797477|gb|EFC52824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
subflava NJ9703]
Length = 421
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 219/308 (71%), Gaps = 23/308 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
N K PTP EI L+ VIGQE AKK L+V+VYNHY R+ + ++ +
Sbjct: 59 ENTEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRHPKAEGK---------- 108
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE
Sbjct: 109 -------VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ 161
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 162 IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP + I +DT +ILFICGGAF +EK I +R + IGFGA V +
Sbjct: 222 SVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENA 281
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+ S+L ETVE DLI +GLIPE +GR PV+ +L L E+ LV +LTEPKNAL K
Sbjct: 282 DI------SALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVK 335
Query: 559 QYRKMFQM 566
QY+ +F+M
Sbjct: 336 QYQTLFEM 343
>gi|167586933|ref|ZP_02379321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ubonensis Bu]
Length = 423
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 221/303 (72%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 66 LPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE----RDA- 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY K+F
Sbjct: 284 --GEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLF 341
Query: 565 QMN 567
M
Sbjct: 342 AME 344
>gi|332141944|ref|YP_004427682.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Deep ecotype']
gi|410862349|ref|YP_006977583.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii AltDE1]
gi|327551966|gb|AEA98684.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Deep ecotype']
gi|410819611|gb|AFV86228.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii AltDE1]
Length = 424
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 220/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DALPKPTEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HEGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R Q D+ IGFGA V++ + +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSKDNSKQI- 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S L + VE DL+ YGLIPEF+GR PV+ SL L E+ L+Q+L EPKNA+ KQY
Sbjct: 285 -----SELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEDALIQILREPKNAITKQYG 339
Query: 562 KMFQMN 567
+F M
Sbjct: 340 ALFSME 345
>gi|392977876|ref|YP_006476464.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392323809|gb|AFM58762.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 424
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ANEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|115374874|ref|ZP_01462147.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Stigmatella
aurantiaca DW4/3-1]
gi|115368092|gb|EAU67054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Stigmatella
aurantiaca DW4/3-1]
Length = 400
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++V+GQ+RAKKVLSVAV+NHY RI ++ V
Sbjct: 39 RIPRPSEIKSILDEYVVGQDRAKKVLSVAVHNHYKRIESK-----------------VQM 81
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+I+ L
Sbjct: 82 DDVELQKSNILLLGPTGSGKTLLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNL 141
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D+++ AQ+GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP K
Sbjct: 142 LQAADHDIERAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKIIEGTIANVPPK 201
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +E+ I R S+GFGA +++ +
Sbjct: 202 GGRKHPQQEFLQVDTTNILFICGGAFGGLEQVIERRLGGRSLGFGADIQSKKQRN----- 256
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ L++ VE DL+ +G+IPEF+GR P++ +L L E LV +L++PKNAL KQYRK+
Sbjct: 257 --LTELLKHVEPEDLLKFGMIPEFIGRLPIITALEELDEPALVNILSQPKNALTKQYRKL 314
Query: 564 FQMNG 568
F+++G
Sbjct: 315 FELDG 319
>gi|397167168|ref|ZP_10490611.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enterobacter
radicincitans DSM 16656]
gi|396091314|gb|EJI88881.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enterobacter
radicincitans DSM 16656]
Length = 424
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVK------GKSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ANEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|312796429|ref|YP_004029351.1| ATP-dependent endopeptidase clp ATP-binding subunit clpX
[Burkholderia rhizoxinica HKI 454]
gi|312168204|emb|CBW75207.1| ATP-dependent endopeptidase clp ATP-binding subunit clpX
[Burkholderia rhizoxinica HKI 454]
Length = 410
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 221/304 (72%), Gaps = 26/304 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P EI + LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 66 LPSPLEIRQILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM-RAGGVTDA 503
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++ R G
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGASVKSKQDRDAG---- 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY K+
Sbjct: 285 ----EVLRDVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKL 340
Query: 564 FQMN 567
F M
Sbjct: 341 FNME 344
>gi|269125775|ref|YP_003299145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermomonospora curvata DSM 43183]
gi|268310733|gb|ACY97107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermomonospora curvata DSM 43183]
Length = 425
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/306 (54%), Positives = 221/306 (72%), Gaps = 21/306 (6%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P+EI + LD +VIGQE AKK LSVAVYNHY RI + S +
Sbjct: 59 DSLPKPREIYEFLDSYVIGQEAAKKALSVAVYNHYKRIQSGDSGR--------------- 103
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD+VEL KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADAT LT+AGYVGEDVE+IL K
Sbjct: 104 DDSVELAKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATALTEAGYVGEDVENILLK 163
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
L+ +DY+V A+ GI+YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP
Sbjct: 164 LIQAADYDVKKAETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQIDT ++LFICGGAF +EK I R +GFGA +R+ +
Sbjct: 224 QGGRKHPHQEFIQIDTTNVLFICGGAFAGLEKIIEARIGKQGMGFGAVIRSK------DE 277
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
A +S ++ + DL+ +G+IPEFVGR PV+ ++ L + L+ +LTEPKNAL KQY++
Sbjct: 278 ASSSSDILSQIMPEDLLKFGMIPEFVGRLPVITNVHNLDRDALIAILTEPKNALVKQYKR 337
Query: 563 MFQMNG 568
+F+++G
Sbjct: 338 LFELDG 343
>gi|89070384|ref|ZP_01157691.1| ATP-dependent protease ATP-binding subunit [Oceanicola granulosus
HTCC2516]
gi|89044031|gb|EAR50206.1| ATP-dependent protease ATP-binding subunit [Oceanicola granulosus
HTCC2516]
Length = 422
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 225/302 (74%), Gaps = 25/302 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC+ LD +VIGQ AK+VLSVAV+NHY R+ + D
Sbjct: 64 PTPREICEVLDDYVIGQMHAKRVLSVAVHNHYKRLNH------------------ADKSD 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
S+YNV AQ+GIVYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K I++R + S++GFGA VR ++ GV
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVR-DVEERGV----- 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +++E DL+ +GLIPEFVGR PV+ +L L E LV +LT+PKNAL KQY+++F
Sbjct: 280 -GEVFKSLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTQPKNALVKQYQRLFD 338
Query: 566 MN 567
+
Sbjct: 339 LE 340
>gi|73541075|ref|YP_295595.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia eutropha
JMP134]
gi|123760219|sp|Q472D2.1|CLPX_RALEJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|72118488|gb|AAZ60751.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia
eutropha JMP134]
Length = 425
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 218/304 (71%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD++VIGQE+AKK+L+VAVYNHY R+ + + D
Sbjct: 67 LPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK-----------------D 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +Q+DT +ILFICGGAF +EK I +R + IGF A V++ +
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVQSK-------EER 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S ++ E DLI +GLIPE +GR PV+ +L L E LVQ+L EPKNAL KQY+K+
Sbjct: 283 EVSEVLPQTEPEDLIKFGLIPELIGRLPVVATLAKLDETALVQILIEPKNALVKQYQKLL 342
Query: 565 QMNG 568
M G
Sbjct: 343 AMEG 346
>gi|365855579|ref|ZP_09395624.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acetobacteraceae bacterium AT-5844]
gi|363719006|gb|EHM02325.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acetobacteraceae bacterium AT-5844]
Length = 418
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 226/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI K LD +VIGQE AKKVL+VAV+NHY R+ + AGE
Sbjct: 62 PTPREISKVLDDYVIGQEHAKKVLAVAVHNHYKRL----AHGGKAGE------------- 104
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VE+ KSNI+L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 165 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 224
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFI GGAF +EK I+ + + S IG+GA VR RAG
Sbjct: 225 RKHPQQEFLQVDTSNILFIVGGAFAGLEKIIAAKGKGSGIGYGAEVRGPDERRAG----- 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++ VE DL+ +GLIPEF+GR PV+ +L L E L+++LT+PKNAL KQY+++
Sbjct: 280 ----AILREVEPEDLLKFGLIPEFIGRLPVIATLEDLDEKALIEILTKPKNALLKQYQRL 335
Query: 564 FQMN 567
F+M
Sbjct: 336 FEME 339
>gi|59711404|ref|YP_204180.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio fischeri
ES114]
gi|423685526|ref|ZP_17660334.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio fischeri
SR5]
gi|75354361|sp|Q5E6Q4.1|CLPX_VIBF1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|59479505|gb|AAW85292.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Vibrio fischeri ES114]
gi|371495438|gb|EHN71034.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio fischeri
SR5]
Length = 428
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/318 (53%), Positives = 223/318 (70%), Gaps = 23/318 (7%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
KD + PTP+ I + LD +VIGQE AKKVL+VAVYNHY R+ N + K
Sbjct: 54 KDNTLSPKESSEELPTPRNIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTK---- 109
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
D VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGY
Sbjct: 110 ------------DGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGY 157
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
VGEDVE+I+ KLL DY+ A A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK
Sbjct: 158 VGEDVENIIQKLLQKCDYDPAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLK 217
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAP 490
++EGT+ +VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA
Sbjct: 218 LIEGTIASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAD 277
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
VR+ + D L + +E DL+ +GLIPEF+GR PV +L L E LVQ+L+
Sbjct: 278 VRSKENEATIGD------LFKQIEPEDLVKFGLIPEFIGRLPVTTTLTELDEEALVQILS 331
Query: 551 EPKNALGKQYRKMFQMNG 568
+PKNAL KQY +F + G
Sbjct: 332 QPKNALTKQYGALFDLEG 349
>gi|410462599|ref|ZP_11316167.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio magneticus str. Maddingley MBC34]
gi|409984259|gb|EKO40580.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio magneticus str. Maddingley MBC34]
Length = 410
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 227/306 (74%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G K P EI + LD++VIGQE+AKK+L+VAV+NHY R+Y S G
Sbjct: 51 GGKLLPPAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAGSA-------------GA 97
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DD VE++KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL
Sbjct: 98 DD--VEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILV 155
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
+LL +DY++ +A +GI+YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 156 QLLQNADYDIESASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIP 215
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
KG RKHP+ + I+++T +ILFI GGAF+ ++K + +R++ S++GFGA V A
Sbjct: 216 PKGGRKHPQQEFIRLNTANILFIVGGAFIGLDKIVGQRQRGSAMGFGAKVEAKSDDD--- 272
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S L+ +DLI +GLIPEFVGR P+L SL LT+ LV++LTEPKNAL KQY+
Sbjct: 273 ----LSKLLTQAHPADLIKFGLIPEFVGRIPILTSLEELTQTDLVRILTEPKNALVKQYQ 328
Query: 562 KMFQMN 567
K+F+++
Sbjct: 329 KLFELD 334
>gi|407691667|ref|YP_006816456.1| ATP-dependent protease ATP-binding subunit ClpX [Actinobacillus
suis H91-0380]
gi|407387724|gb|AFU18217.1| ATP-dependent protease ATP-binding subunit ClpX [Actinobacillus
suis H91-0380]
Length = 419
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 221/304 (72%), Gaps = 20/304 (6%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EI LD++VIGQE AKKVLSVAVYNHY R+ N S + T+GV
Sbjct: 65 PTPHEIHAHLDEYVIGQEHAKKVLSVAVYNHYKRLRNALSGHKE--------TNGV---- 112
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLTQAGYVGEDVE+++ KLL
Sbjct: 113 -ELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLM 171
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
D++ A++GIV+IDE+DKIT+K+ES +I+RDVSGEGVQQALLK++EGTV N+ +G+
Sbjct: 172 KCDFDAEQAERGIVFIDEIDKITRKSESPSITRDVSGEGVQQALLKLIEGTVANINPQGS 231
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+G+ I +DT ILFICGGAF ++K + R + IGFGA ++ + +T+
Sbjct: 232 RKHPKGETIPVDTSKILFICGGAFAGLDKLVEARTNKQGGIGFGAELKKDKEREDLTE-- 289
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L + VE DL+ +GLIPE +GR PV+ L L E L+Q+LTEPKNA+ KQY+ +F
Sbjct: 290 ----LFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPKNAIIKQYQALF 345
Query: 565 QMNG 568
QM G
Sbjct: 346 QMEG 349
>gi|354598749|ref|ZP_09016766.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brenneria sp.
EniD312]
gi|353676684|gb|EHD22717.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brenneria sp.
EniD312]
Length = 425
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 226/306 (73%), Gaps = 25/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+ +S +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDVAS--------N 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS--SIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I E+R D+ IGFGA V+ G +
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFGATVK------GSAE 280
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+
Sbjct: 281 KATEGELLGQVEPGDLIKFGLIPEFIGRLPVVATLRELSEDALIQILREPKNALTKQYQA 340
Query: 563 MFQMNG 568
+F + G
Sbjct: 341 LFNLEG 346
>gi|88800032|ref|ZP_01115602.1| ATP-dependent protease ATP-binding subunit [Reinekea blandensis
MED297]
gi|88777158|gb|EAR08363.1| ATP-dependent protease ATP-binding subunit [Reinekea blandensis
MED297]
Length = 392
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 219/303 (72%), Gaps = 24/303 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++VIGQ+RAK VLSVAVYNHY R+ GE++S
Sbjct: 30 RLPVPSEIRSTLDEYVIGQDRAKMVLSVAVYNHYKRL--------QYGEANS-------- 73
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL KSNILL+GPTGSGKTLLA+T+AR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 74 -DVELSKSNILLIGPTGSGKTLLAETMARLLNVPFTMADATTLTEAGYVGEDVENIIQKL 132
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 133 LQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 192
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +EK I R IGF A V+ D
Sbjct: 193 GGRKHPQQEFLQVDTANILFICGGAFAGLEKVIQNRTDKGGIGFNAEVKKK-------DD 245
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S++ VE DL+ YGLIPEF+GR PV+ +L L E LVQ+LT PKN+L KQY+K+
Sbjct: 246 RKLGSVIANVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALVQILTTPKNSLVKQYQKL 305
Query: 564 FQM 566
F+M
Sbjct: 306 FEM 308
>gi|377576798|ref|ZP_09805782.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
hermannii NBRC 105704]
gi|377542830|dbj|GAB50947.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
hermannii NBRC 105704]
Length = 424
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLTQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|427706273|ref|YP_007048650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nostoc sp. PCC
7107]
gi|427358778|gb|AFY41500.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nostoc sp. PCC
7107]
Length = 446
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 223/305 (73%), Gaps = 15/305 (4%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI K LD+ VIGQE AKKVLSVAVYNHY R+ Q + G++
Sbjct: 77 NQIPKPREIKKYLDEHVIGQEEAKKVLSVAVYNHYKRLA--ILQSKGNGKNGG------- 127
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD+VEL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 128 DDSVELQKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLR 187
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP
Sbjct: 188 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPP 247
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILF+CGGAFV +EK + +R SIGF P + D
Sbjct: 248 QGGRKHPYQDCIQIDTSNILFVCGGAFVGLEKVVEQRAGKKSIGFVQPGEGQSKEKRAAD 307
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
++ +E DL+ +G+IPEF+GR P++ + L E L+ +LT+P++AL KQY+K
Sbjct: 308 ------VLHNLEPDDLVKFGMIPEFIGRIPMVAVVDPLDEEALMAILTQPRSALVKQYQK 361
Query: 563 MFQMN 567
+ +M+
Sbjct: 362 LLKMD 366
>gi|381169037|ref|ZP_09878212.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phaeospirillum
molischianum DSM 120]
gi|380681826|emb|CCG43034.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phaeospirillum
molischianum DSM 120]
Length = 421
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 222/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTPK+I LD +VIGQ+ AKKVLSVAV+NHY R+ + G +
Sbjct: 64 PTPKDIRAVLDDYVIGQDHAKKVLSVAVHNHYKRLQH-----------------GAKSNE 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
++YNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I R + +SIGFGA VR D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGKGTSIGFGAEVRG-------PDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL+ +GLIPEFVGR PVL +L L + L+++L++PKNAL KQY+++F+
Sbjct: 280 TGEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVSALIEILSKPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|332186790|ref|ZP_08388532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
sp. S17]
gi|332013123|gb|EGI55186.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
sp. S17]
Length = 420
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 219/302 (72%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC LD +VIGQ++AK+VLSVAV+NHY R+ + G
Sbjct: 62 PTPQEICNVLDDYVIGQKQAKRVLSVAVHNHYKRLNH-----------------GAKGAD 104
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 165 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 224
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK I +R Q SIGFGA V A +
Sbjct: 225 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLQGKSIGFGAYVAA-------PEEKR 277
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T + E DL+ +GLIPEFVGR PV+ +L L LV++L+EPKNAL KQY+K+F+
Sbjct: 278 TGEYLRQTEPEDLLKFGLIPEFVGRLPVIATLEDLDIAALVKILSEPKNALVKQYQKLFE 337
Query: 566 MN 567
M
Sbjct: 338 ME 339
>gi|296134053|ref|YP_003641300.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermincola
potens JR]
gi|296032631|gb|ADG83399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermincola
potens JR]
Length = 419
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/313 (55%), Positives = 227/313 (72%), Gaps = 25/313 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G +G + P P+EI + LD++VIGQE AKK L+VAVYNHY RI
Sbjct: 55 GVEIG-ELPKPREIKEILDQYVIGQEPAKKALAVAVYNHYKRI----------------- 96
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
G D VEL+KSNI+++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE
Sbjct: 97 NMGNKIDDVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVE 156
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+IL KL+ +DY+V A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV
Sbjct: 157 NILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTV 216
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP + IQ+DT +ILFICGGAF IEK I R ++GFGA +++
Sbjct: 217 ASVPPQGGRKHPHQEFIQLDTTNILFICGGAFDGIEKIIQNRIGKKTLGFGAEIKSQKEK 276
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
+++ + DL+ +GLIPEFVGR PV+V+L AL EN LV++LTEP+NAL
Sbjct: 277 N-------VGDILKHILPEDLLKFGLIPEFVGRLPVIVTLEALDENALVRILTEPRNALI 329
Query: 558 KQYRKMFQMNGQA 570
KQY+K+F+++ A
Sbjct: 330 KQYQKLFELDNIA 342
>gi|83721081|ref|YP_442644.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
gi|167581578|ref|ZP_02374452.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis TXDOH]
gi|167619694|ref|ZP_02388325.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis Bt4]
gi|257138855|ref|ZP_05587117.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
gi|123536902|sp|Q2SWQ5.1|CLPX_BURTA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83654906|gb|ABC38969.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
Length = 423
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 222/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 66 LPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE----RDA- 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY+K+F
Sbjct: 284 --GEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLF 341
Query: 565 QMN 567
M
Sbjct: 342 AME 344
>gi|84686589|ref|ZP_01014482.1| ATP-dependent protease ATP-binding subunit [Maritimibacter
alkaliphilus HTCC2654]
gi|84665502|gb|EAQ11979.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2654]
Length = 423
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/332 (52%), Positives = 233/332 (70%), Gaps = 35/332 (10%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
+++R GSG S DG PTP+EIC LD +VIGQ AK+VLSVAV+N
Sbjct: 47 DIIREETKGSGLKS--TDG----------VPTPQEICGVLDDYVIGQSHAKRVLSVAVHN 94
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + + D +EL KSNILL+GPTG GKTLLA+TLAR ++
Sbjct: 95 HYKRLNHAAKHG----------------DEIELAKSNILLIGPTGCGKTLLAQTLARILD 138
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPF +ADATTLT+AGYVGEDVE+I+ KLL S+YNV AQ+GIVYIDEVDKIT+K+++ +
Sbjct: 139 VPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPS 198
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGTV +VP +G RKHP+ + +Q+DT +ILFICGGAF +++
Sbjct: 199 ITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRI 258
Query: 476 ISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLV 535
I++R + S+IGFGA V+ A + + +E DL+ +GLIPEFVGR PV+
Sbjct: 259 IAQRGKGSAIGFGADVKDEQ-------ARKIGEVFQELEPEDLLKFGLIPEFVGRLPVIA 311
Query: 536 SLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E+ LV +LT+PKNAL KQY+++F++
Sbjct: 312 TLEDLDEDALVTILTQPKNALVKQYQRLFEIE 343
>gi|434402425|ref|YP_007145310.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Cylindrospermum stagnale PCC 7417]
gi|428256680|gb|AFZ22630.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Cylindrospermum stagnale PCC 7417]
Length = 446
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 225/305 (73%), Gaps = 15/305 (4%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI K LD+ VIGQ+ AKKVLSVAVYNHY R+ S Q +S+G+ +
Sbjct: 77 NQIPKPREIKKYLDEHVIGQDEAKKVLSVAVYNHYKRLA--SVQAKSSGKGGA------- 127
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D VEL+KSNILL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 128 EDAVELQKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLR 187
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP
Sbjct: 188 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPP 247
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILF+CGGAFV ++K + +R SIGF P G T
Sbjct: 248 QGGRKHPYQDCIQIDTSNILFVCGGAFVGLDKVVDQRVGKKSIGFVQP------GEGQTK 301
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ + +E DL+ +G+IPEF+GR P++ + L E L+ +LT+P++AL KQY+K
Sbjct: 302 EKRAADTLRHLEPDDLVKFGMIPEFIGRVPMVAVVDPLDEEALMAILTQPRSALVKQYQK 361
Query: 563 MFQMN 567
+ +M+
Sbjct: 362 LLKMD 366
>gi|387127881|ref|YP_006296486.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM1]
gi|386274943|gb|AFI84841.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM1]
Length = 361
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 216/302 (71%), Gaps = 23/302 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P EI L+ +VIGQ +AK+VLSVAVYNHY R+ + G +D
Sbjct: 1 MPSPHEIDSALNNYVIGQAKAKRVLSVAVYNHYKRLRH-----------------GTKND 43
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 44 DVELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKLL 103
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V A+ GIVYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 104 QKCDYDVEKAETGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQG 163
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q+DT ILFICGGAF ++K I R IGF A V++ V
Sbjct: 164 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTHKGGIGFSAEVKS------VDTKS 217
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+S + VE DLI YGLIPEFVGR PV+ +L L E LVQ+LTEPKNAL KQY K+F
Sbjct: 218 PSSEALRGVEPEDLIQYGLIPEFVGRLPVVATLEELDEAALVQILTEPKNALTKQYEKLF 277
Query: 565 QM 566
++
Sbjct: 278 EL 279
>gi|381199611|ref|ZP_09906758.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae XLDN2-5]
Length = 422
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/317 (56%), Positives = 224/317 (70%), Gaps = 26/317 (8%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
+K G G + G PTP+EIC LD +VIGQ+RAK+VLSVAV+NHY R+ + S
Sbjct: 52 TKGGLVGKKDGG--VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHGSK----P 105
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
GE VEL KSNILL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+AG
Sbjct: 106 GE-------------VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEAG 152
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+I+ KLL SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALL
Sbjct: 153 YVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALL 212
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I +R + SIGFGA
Sbjct: 213 KLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGAH 272
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
V A + T L+ E DL+ +GLIPEFVGR PV+ +L L LV++L
Sbjct: 273 VAA-------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 551 EPKNALGKQYRKMFQMN 567
EPKNAL KQY K+F M
Sbjct: 326 EPKNALVKQYGKLFDME 342
>gi|378956163|ref|YP_005213650.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|438147682|ref|ZP_20876175.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|357206774|gb|AET54820.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|434938413|gb|ELL45391.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
Length = 423
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELWSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|421894267|ref|ZP_16324757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
pentosaceus IE-3]
gi|385272811|emb|CCG90129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
pentosaceus IE-3]
Length = 418
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 220/303 (72%), Gaps = 21/303 (6%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EI L+++VIGQE AKK LSVAVYNHY RI N+ ++ ++ D+D
Sbjct: 63 PTPAEIVDYLNQYVIGQEEAKKTLSVAVYNHYKRI-NKMAETKA------------DEDE 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 110 PELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AA++GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 170 NADYNVEAAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + IQI+T +ILFI GGAF IE + R D +IGFG +
Sbjct: 230 RKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTTVEED------- 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
SLM+ V DL+ +GLIPEF+GR P+L +L LTE LV +LTEPKNAL KQY+ +
Sbjct: 283 -KSLMQQVIPEDLLNFGLIPEFIGRLPILSALEKLTEEDLVHILTEPKNALVKQYKTLLG 341
Query: 566 MNG 568
++G
Sbjct: 342 LDG 344
>gi|427407871|ref|ZP_18898073.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae ATCC 51230]
gi|425713834|gb|EKU76846.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae ATCC 51230]
Length = 422
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/317 (56%), Positives = 224/317 (70%), Gaps = 26/317 (8%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
+K G G + G PTP+EIC LD +VIGQ+RAK+VLSVAV+NHY R+ + S
Sbjct: 52 TKGGLVGKKDGG--VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHGSK----P 105
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
GE VEL KSNILL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+AG
Sbjct: 106 GE-------------VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEAG 152
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+I+ KLL SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALL
Sbjct: 153 YVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALL 212
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I +R + SIGFGA
Sbjct: 213 KLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGAH 272
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
V A + T L+ E DL+ +GLIPEFVGR PV+ +L L LV++L
Sbjct: 273 VAA-------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 551 EPKNALGKQYRKMFQMN 567
EPKNAL KQY K+F M
Sbjct: 326 EPKNALVKQYGKLFDME 342
>gi|374295112|ref|YP_005045303.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
clariflavum DSM 19732]
gi|359824606|gb|AEV67379.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
clariflavum DSM 19732]
Length = 431
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N P P EI + LD++VIGQE AKK LSVAVYNHY RI ++ G D
Sbjct: 59 NDIPKPAEIKEILDQYVIGQESAKKALSVAVYNHYKRINSDFK--------------GSD 104
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL+KSNI+++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL K
Sbjct: 105 ---VELQKSNIIMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLK 161
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
L+ +DY++ A++GI+YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP
Sbjct: 162 LIQAADYDIERAEKGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPP 221
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQIDT +ILFICGGAF IEK I R S+GFGA + + +
Sbjct: 222 QGGRKHPHQEFIQIDTTNILFICGGAFDGIEKIIQNRIGKKSMGFGANIESKKKMD---- 277
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+++ + DL+ +GLIPEFVGR P++VSL +L + L+Q+LTEPKNAL KQY+K
Sbjct: 278 ---VGEILKHIYPQDLLKFGLIPEFVGRLPIMVSLHSLDKAALIQILTEPKNALVKQYKK 334
Query: 563 MFQMN 567
+F+M+
Sbjct: 335 LFEMD 339
>gi|428309358|ref|YP_007120335.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microcoleus
sp. PCC 7113]
gi|428250970|gb|AFZ16929.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microcoleus
sp. PCC 7113]
Length = 446
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/307 (55%), Positives = 232/307 (75%), Gaps = 20/307 (6%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P EI K LD++VIGQ++AKKVLSVAVYNHY R+ +S+ ESS T D
Sbjct: 78 HQLPKPIEIKKALDEYVIGQDQAKKVLSVAVYNHYKRLGVDSN------ESSKTTLD--- 128
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
++V+L KSNILL+GPTG GKTLLA++LA ++VPF +ADATTLT+AGYVG+DVE+IL +
Sbjct: 129 -ESVKLSKSNILLIGPTGCGKTLLAQSLATQLDVPFAVADATTLTEAGYVGDDVENILLR 187
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D+NV AA++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTVVNVP
Sbjct: 188 LLQVADFNVEAAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVVNVPP 247
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF--GAPVRANMRAGGV 500
+G RKHP + IQIDT +ILFICGGAFV ++K + +R SSIGF A V++ +
Sbjct: 248 QGGRKHPYQECIQIDTSNILFICGGAFVGLDKVVEQRIGKSSIGFVQSAEVQSQQKP--- 304
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
T+ L + +E DL+ +GLIPE +GR P + S+ L E+ L+++LT+P NAL KQY
Sbjct: 305 -----TAELFKHLEPEDLVKFGLIPEMIGRLPAITSVEPLDEDALMRILTQPHNALVKQY 359
Query: 561 RKMFQMN 567
+K+ +M+
Sbjct: 360 QKLLKMD 366
>gi|317050718|ref|YP_004111834.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfurispirillum indicum S5]
gi|316945802|gb|ADU65278.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfurispirillum indicum S5]
Length = 429
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 215/303 (70%), Gaps = 19/303 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI + LD++VIGQER+KK+LSVAVYNHY RIY S + G + +
Sbjct: 70 LPRPSEIKESLDEYVIGQERSKKILSVAVYNHYKRIY------------SLLDSRGAEGE 117
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VE+ KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 118 DVEISKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATTLTEAGYVGEDVENILLKLL 177
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
D++V AQ+GI+YIDE+DKI++K+E+++I+RDVSGEGVQQALLK++EGTV NVP KG
Sbjct: 178 QSCDFDVERAQRGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKIVEGTVANVPPKG 237
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILFICGGAF ++ + R +GFG + N + +
Sbjct: 238 GRKHPNQEFIQIDTTNILFICGGAFEGLDGIVGRRLGKKMLGFGQELSENRK-------L 290
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L+ V D+I YGLIPE VGR PV+ +L L E L+Q+L EPKNAL KQY M
Sbjct: 291 QKDELLAKVHPEDIIRYGLIPELVGRLPVIAALEELNEAALIQILQEPKNALVKQYAHML 350
Query: 565 QMN 567
M+
Sbjct: 351 AMD 353
>gi|402851378|ref|ZP_10899538.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodovulum sp.
PH10]
gi|402498353|gb|EJW10105.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodovulum sp.
PH10]
Length = 422
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 224/305 (73%), Gaps = 28/305 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI K LD +VIGQ+ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPREIRKVLDDYVIGQDHAKKVLSVAVHNHYKRLNHQAKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILF+CGGAF +EK IS R + +SIGF A V A + +AG
Sbjct: 226 GRKHPQQEFLQVDTTNILFVCGGAFAGLEKIISGRGRTTSIGFAATVAAPEDRKAG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DL+ YGLIPEFVGR PV+ +L L E L ++L EPKNAL KQY++
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEAALKRILLEPKNALVKQYQR 336
Query: 563 MFQMN 567
+F+M
Sbjct: 337 LFEME 341
>gi|16126204|ref|NP_420768.1| ATP-dependent protease ATP-binding subunit [Caulobacter crescentus
CB15]
gi|221234976|ref|YP_002517412.1| ATP-dependent protease ATP-binding subunit ClpX [Caulobacter
crescentus NA1000]
gi|239977101|sp|B8GX14.1|CLPX_CAUCN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|239977102|sp|P0CAU2.1|CLPX_CAUCR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|3688207|emb|CAA09092.1| clpX protein [Caulobacter crescentus CB15]
gi|13423422|gb|AAK23936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
crescentus CB15]
gi|220964148|gb|ACL95504.1| ATP-dependent endopeptidase clp, ATP-binding subunit ClpX
[Caulobacter crescentus NA1000]
Length = 420
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 221/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC+ LD +VIGQ AKKVL+VAV+NHY R+ + S ++
Sbjct: 64 PTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHASK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R SIGFGA V +
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAKVTD-------PEERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL +GLIPEF+GR PV+ +L L E LV++LTEPKNA KQY+++F+
Sbjct: 280 TGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|295689636|ref|YP_003593329.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caulobacter
segnis ATCC 21756]
gi|295431539|gb|ADG10711.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
segnis ATCC 21756]
Length = 420
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 221/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EIC+ LD +VIGQ AKKVL+VAV+NHY R+ + S ++
Sbjct: 64 PTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHASK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +EK IS R SIGFGA V +
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAKVTD-------PEERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T ++ VE DL +GLIPEF+GR PV+ +L L E LV++LTEPKNA KQY+++F+
Sbjct: 280 TGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|170692396|ref|ZP_02883559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
graminis C4D1M]
gi|170142826|gb|EDT10991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
graminis C4D1M]
Length = 423
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/333 (53%), Positives = 233/333 (69%), Gaps = 35/333 (10%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
++R +G+G +G S+L P+P+EI + LD++VIGQERAKK+L+VAVYN
Sbjct: 46 EIIRDEAAGAGIEAG-----LSKSDL----PSPQEIREILDQYVIGQERAKKILAVAVYN 96
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + + D +EL KSNILL+GPTGSGKTLLA+TLAR +N
Sbjct: 97 HYKRLKHLDKK-----------------DEIELSKSNILLIGPTGSGKTLLAQTLARLLN 139
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPFVIADATTLT+AGYVGEDVE+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +
Sbjct: 140 VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPS 199
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF +EK
Sbjct: 200 ITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKV 259
Query: 476 ISERRQDSSIGFGAPVRANM-RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVL 534
I +R + + IGFGA V++ R G ++ VE DLI +GLIPE +GR PV+
Sbjct: 260 IVDRTEKTGIGFGASVKSKQDRDAG--------EVLREVEPEDLIKFGLIPELIGRLPVV 311
Query: 535 VSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E L+++L EPKNAL KQY K+F M
Sbjct: 312 ATLGKLDEAALMKILVEPKNALVKQYHKLFNME 344
>gi|157363410|ref|YP_001470177.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga
lettingae TMO]
gi|157314014|gb|ABV33113.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
lettingae TMO]
Length = 404
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/306 (54%), Positives = 224/306 (73%), Gaps = 28/306 (9%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LDK+VIGQE+AK+V+SVAVYNHY R++ ES D+
Sbjct: 52 ELPKPAEIKAELDKYVIGQEKAKRVISVAVYNHYKRVFYES-----------------DN 94
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VE+EKSNI+L+GPTGSGKTL+A+ LA+ ++VPF IADAT LT+AGYVGEDVE+++ +L
Sbjct: 95 DDVEIEKSNIMLIGPTGSGKTLIARVLAKILDVPFAIADATPLTEAGYVGEDVENVILRL 154
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+ ++V Q GIVYIDE+DKI +K+ + +I+RDVSGEGVQQALLK++EGTV NVP +
Sbjct: 155 LEVAHFDVERTQYGIVYIDEIDKIARKSPNPSITRDVSGEGVQQALLKIVEGTVANVPPQ 214
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRAN--MRAGGVT 501
G RKHP + I++DT +ILFI GGAF +E+ + R QDSS+GFGA +++ MR G +
Sbjct: 215 GGRKHPYQEFIKVDTSNILFIVGGAFDGLEEIVKRRIQDSSMGFGADIKSKKRMRLGEIL 274
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
VV DL+ YG+IPEFVGRFPV+ +L LTE LV++L EPKNA+ KQY+
Sbjct: 275 SHVV---------PDDLVQYGMIPEFVGRFPVIATLDDLTEEDLVRILNEPKNAIVKQYK 325
Query: 562 KMFQMN 567
K+FQ++
Sbjct: 326 KLFQLD 331
>gi|270156950|ref|ZP_06185607.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae D-4968]
gi|289164626|ref|YP_003454764.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae NSW150]
gi|269988975|gb|EEZ95229.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae D-4968]
gi|288857799|emb|CBJ11643.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae NSW150]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 222/304 (73%), Gaps = 23/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P+P+EI LD++VIGQ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 QLPSPQEISGFLDEYVIGQAHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQKCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +EK I ER S IGF A ++ D
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLEKVIRERSDKSGIGFSAQLK---NKKDTNDE 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ S ++ +ES DLI YGLIPEFVGR PV+ +L L ++ L+ +LT PKNAL KQ++ +
Sbjct: 281 I--SKVLNQLESDDLIKYGLIPEFVGRLPVVTTLQELDQSALIDILTNPKNALTKQFQSL 338
Query: 564 FQMN 567
F+M
Sbjct: 339 FKME 342
>gi|163868072|ref|YP_001609276.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
tribocorum CIP 105476]
gi|189082484|sp|A9ISA8.1|CLPX_BART1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161017723|emb|CAK01281.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
tribocorum CIP 105476]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/317 (53%), Positives = 229/317 (72%), Gaps = 25/317 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G + + PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S
Sbjct: 58 GVKVRDGVPTPQEIIAVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKS----------- 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
+ +EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 107 ------NDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVE 160
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL +DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 161 NIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTI 220
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A
Sbjct: 221 ASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA---- 276
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALG 557
D + +E DLI +GLIPEF+GR P++ +L L N L+Q+L++PKNAL
Sbjct: 277 ---PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALMQILSQPKNALV 333
Query: 558 KQYRKMFQM-NGQAAFY 573
KQY+++F+M N + AF+
Sbjct: 334 KQYQRLFEMENVELAFH 350
>gi|337291362|ref|YP_004630383.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
gi|384516211|ref|YP_005711303.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
gi|397654563|ref|YP_006495246.1| ATP-dependent protease ATP-binding subunit ClpX [Corynebacterium
ulcerans 0102]
gi|334697412|gb|AEG82209.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
gi|334699668|gb|AEG84464.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
gi|393403519|dbj|BAM28011.1| ATP-dependent protease ATP-binding subunit ClpX [Corynebacterium
ulcerans 0102]
Length = 428
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/319 (53%), Positives = 227/319 (71%), Gaps = 16/319 (5%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G K P P EI LDK+VIGQ+ AK++LSVAVYNHY R+ E ES +T
Sbjct: 61 GTKLPRPSEISAFLDKYVIGQDDAKRILSVAVYNHYKRVRAE--------ESRVLSTRKN 112
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DD EL+KSNIL++GPTGSGKT LA+TLAR ++VPF IADAT+LT+AGYVGEDVE+IL
Sbjct: 113 KDDETELQKSNILMLGPTGSGKTYLAQTLARLLDVPFAIADATSLTEAGYVGEDVENILL 172
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL ++++V AQ+GI+Y+DEVDKI++K+++ +I+RDVSGEGVQQALLK+LEGTV ++P
Sbjct: 173 KLLQAAEFDVQRAQRGIIYVDEVDKISRKSDNPSITRDVSGEGVQQALLKILEGTVASIP 232
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP D IQ+DT +ILFI GAF +EK I ERR IGFGA +
Sbjct: 233 PQGGRKHPNQDFIQLDTSNILFIVAGAFAGLEKVIEERRGKKGIGFGAELTTK------- 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ + + + V DL+ +GLIPEF+GR P++ ++ L + LV+VLTEPKN+L KQY+
Sbjct: 286 EDIDEIDVFKEVLPEDLVKFGLIPEFIGRLPIVATVGNLDQRSLVKVLTEPKNSLVKQYQ 345
Query: 562 KMFQMNGQA-AFYGKCFEI 579
++F+M+G A F EI
Sbjct: 346 RLFEMDGVALEFDDDALEI 364
>gi|116492902|ref|YP_804637.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
pentosaceus ATCC 25745]
gi|122265634|sp|Q03F27.1|CLPX_PEDPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|116103052|gb|ABJ68195.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pediococcus
pentosaceus ATCC 25745]
Length = 418
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 220/303 (72%), Gaps = 21/303 (6%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP EI L+++VIGQE AKK LSVAVYNHY RI N+ ++ ++ D+D
Sbjct: 63 PTPAEIVDYLNQYVIGQEEAKKTLSVAVYNHYKRI-NKMAETKA------------DEDE 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 110 PELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AA++GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 170 NADYNVEAAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + IQI+T +ILFI GGAF IE + R D +IGFG +
Sbjct: 230 RKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTTVEED------- 282
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
SLM+ V DL+ +GLIPEF+GR P+L +L LTE LV +LTEPKNAL KQY+ +
Sbjct: 283 -KSLMQQVIPEDLLNFGLIPEFIGRLPILSALEKLTEEDLVHILTEPKNALVKQYKTLLG 341
Query: 566 MNG 568
++G
Sbjct: 342 LDG 344
>gi|407700788|ref|YP_006825575.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Black Sea 11']
gi|407249935|gb|AFT79120.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Black Sea 11']
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 219/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DALPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HEGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R Q D+ IGFGA V++ + +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSKDNSKKI- 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S L + VE DL+ YGLIPEF+GR PV+ SL L E L+Q+L EPKNA+ KQY
Sbjct: 285 -----SELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILREPKNAITKQYG 339
Query: 562 KMFQMN 567
+F M
Sbjct: 340 ALFSME 345
>gi|256847017|ref|ZP_05552463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
coleohominis 101-4-CHN]
gi|256715681|gb|EEU30656.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
coleohominis 101-4-CHN]
Length = 416
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 223/305 (73%), Gaps = 22/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP EI K LD +VIGQ AKK LSVAVYNHY R+ + G ++
Sbjct: 60 KVPTPAEIMKQLDDYVIGQGEAKKTLSVAVYNHYKRV--------------NAMVTGDNN 105
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
DT EL+KSNI ++GPTGSGKT LA++LAR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 DT-ELQKSNIAVIGPTGSGKTYLAQSLARILNVPFAIADATTLTEAGYVGEDVENIILKL 164
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +DY+V A++GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 165 LQAADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQ 224
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + IQ+DTK+ILFI GGAF IE + ER D +IGFG + D
Sbjct: 225 GGRKHPQQEFIQVDTKNILFIVGGAFDGIESIVKERLGDKTIGFGTDSKE-------ADQ 277
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V ++++ V DL+ +GLIPEF+GR PV+ +L L E+ LV++LTEPKNAL KQY+++
Sbjct: 278 VNEKNILQHVIPEDLLKFGLIPEFIGRLPVMTALEKLDEDDLVRILTEPKNALVKQYQEL 337
Query: 564 FQMNG 568
+++G
Sbjct: 338 IRLDG 342
>gi|423711328|ref|ZP_17685648.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis Sb944nv]
gi|395415242|gb|EJF81677.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis Sb944nv]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/315 (53%), Positives = 227/315 (72%), Gaps = 25/315 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 66 PTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKS-----------------ND 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGKKTSIGFSATVKA-------PDERC 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DLI +GLIPEF+GR P++ +L L N LVQ+L++PKNAL KQY+++F+
Sbjct: 282 VGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFE 341
Query: 566 M-NGQAAFYGKCFEI 579
M N + AF+ +
Sbjct: 342 MENVELAFHEDALRV 356
>gi|161524523|ref|YP_001579535.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|189350721|ref|YP_001946349.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|221198215|ref|ZP_03571261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2M]
gi|221209203|ref|ZP_03582195.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2]
gi|221215058|ref|ZP_03588025.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD1]
gi|421469014|ref|ZP_15917511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC BAA-247]
gi|421479612|ref|ZP_15927295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CF2]
gi|238687053|sp|A9AJR1.1|CLPX_BURM1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|160341952|gb|ABX15038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|189334743|dbj|BAG43813.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
gi|221164994|gb|EED97473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD1]
gi|221170941|gb|EEE03396.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2]
gi|221182147|gb|EEE14548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2M]
gi|400222688|gb|EJO53051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CF2]
gi|400230739|gb|EJO60490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC BAA-247]
Length = 423
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 221/304 (72%), Gaps = 26/304 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P+P+EI LD++VIGQERAKK+L+VAVYNHY R+ + + D
Sbjct: 66 LPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKK-----------------D 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM-RAGGVTDA 503
RKHP D IQ+DT +ILFICGGAF +EK I++R + + IGFGA V++ R G
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQDRDAG---- 284
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ VE DLI +GLIPE +GR PV+ +L L E L+++L EPKNAL KQY K+
Sbjct: 285 ----EVLRDVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKL 340
Query: 564 FQMN 567
F M
Sbjct: 341 FAME 344
>gi|383816699|ref|ZP_09972091.1| ATP-dependent protease ATP-binding subunit ClpX [Serratia sp.
M24T3]
gi|383294411|gb|EIC82753.1| ATP-dependent protease ATP-binding subunit ClpX [Serratia sp.
M24T3]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIREHLDDYVIGQEPAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS-IGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S+ IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTSTGIGFGAVVK------GKSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGQLLAQAEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|28211966|ref|NP_782910.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium tetani
E88]
gi|46576541|sp|Q891J8.1|CLPX_CLOTE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28204409|gb|AAO36847.1| ATP-dependent clp protease ATP-binding subunit clpX [Clostridium
tetani E88]
Length = 431
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/303 (54%), Positives = 224/303 (73%), Gaps = 24/303 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD +VIGQ+ AKK LSVAVYNHY RI + V+DD
Sbjct: 62 LPKPSEIKSYLDDYVIGQDDAKKALSVAVYNHYKRI----------------NLNNVNDD 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNILL+GPTGSGKTLLA+T+A+++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 -VELQKSNILLLGPTGSGKTLLAQTMAKFLNVPFAIADATTLTEAGYVGEDVENILLKLI 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQ+LLK+LEGT+ +VP +G
Sbjct: 165 QNADYDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQSLLKILEGTIASVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQ++T +ILFICGGAF ++K I R ++SS+GFGA +++
Sbjct: 225 GRKHPHQEFIQLNTTNILFICGGAFDGVDKLIERRTRNSSLGFGADIKSKRDEN------ 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L++ + DL+ +GLIPEF+GR P+ V+L AL + LV++LTEPKNAL KQY+K+F
Sbjct: 279 -VGELLKKIMPEDLLKFGLIPEFIGRLPITVTLSALDRDALVEILTEPKNALVKQYKKLF 337
Query: 565 QMN 567
+M+
Sbjct: 338 EMD 340
>gi|333892290|ref|YP_004466165.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
SN2]
gi|332992308|gb|AEF02363.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
SN2]
Length = 425
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 217/306 (70%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DALPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HDGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R Q + IGFGA V++
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKGTGIGFGAAVKSKSE----- 280
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ S L + VE DL+ YGLIPEF+GR PV+ SL L E L+Q+L EPKNA+ KQY
Sbjct: 281 NTAQISELFKQVEPQDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILKEPKNAITKQYS 340
Query: 562 KMFQMN 567
+F M
Sbjct: 341 ALFDME 346
>gi|332140446|ref|YP_004426184.1| ATP-dependent protease ATP-binding subunit [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550468|gb|AEA97186.1| ATP-dependent protease ATP-binding subunit [Alteromonas macleodii
str. 'Deep ecotype']
Length = 346
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 220/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DALPKPTEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HEGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R Q D+ IGFGA V++ + +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSKDNSKQI- 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S L + VE DL+ YGLIPEF+GR PV+ SL L E+ L+Q+L EPKNA+ KQY
Sbjct: 285 -----SELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEDALIQILREPKNAITKQYG 339
Query: 562 KMFQMN 567
+F M
Sbjct: 340 ALFSME 345
>gi|409406435|ref|ZP_11254897.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum sp. GW103]
gi|386434984|gb|EIJ47809.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum sp. GW103]
Length = 421
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 217/304 (71%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI LD++VIGQ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + K IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S ++ E DL+ +GLIPE VGR PV+ +L L E L+Q+L EPKNAL KQY K+
Sbjct: 282 -NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLL 340
Query: 565 QMNG 568
QM G
Sbjct: 341 QMEG 344
>gi|295096775|emb|CBK85865.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAT------SEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 PNEGQLLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|406597482|ref|YP_006748612.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii ATCC 27126]
gi|407684496|ref|YP_006799670.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'English Channel 673']
gi|407688424|ref|YP_006803597.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|406374803|gb|AFS38058.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii ATCC 27126]
gi|407246107|gb|AFT75293.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'English Channel 673']
gi|407291804|gb|AFT96116.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 219/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD +VIGQE AKKVLSVAVYNHY R+ N G
Sbjct: 63 DALPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRN-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HEGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R Q D+ IGFGA V++ + +
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSKDNSKQI- 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S L + VE DL+ YGLIPEF+GR PV+ SL L E L+Q+L EPKNA+ KQY
Sbjct: 285 -----SELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILREPKNAITKQYG 339
Query: 562 KMFQMN 567
+F M
Sbjct: 340 ALFSME 345
>gi|258621303|ref|ZP_05716337.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM573]
gi|424807154|ref|ZP_18232562.1| ATP-dependent protease ATP-binding subunit [Vibrio mimicus SX-4]
gi|258586691|gb|EEW11406.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM573]
gi|342325096|gb|EGU20876.1| ATP-dependent protease ATP-binding subunit [Vibrio mimicus SX-4]
Length = 426
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 222/305 (72%), Gaps = 25/305 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N T DGV
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN-----------GDTTGDGV--- 110
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 --ELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERR--QDSSIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I ERR + IGFGA VR+ +
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-ERRVATGTGIGFGADVRSK------DN 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY
Sbjct: 282 SKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAA 341
Query: 563 MFQMN 567
+F++
Sbjct: 342 LFELE 346
>gi|78485522|ref|YP_391447.1| ATP-dependent protease ATP-binding subunit ClpX [Thiomicrospira
crunogena XCL-2]
gi|78363808|gb|ABB41773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thiomicrospira
crunogena XCL-2]
Length = 416
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/307 (56%), Positives = 222/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTP EI + L+ +VIGQ +AKKVLSVAVYNHY R+ ES ++
Sbjct: 56 DHLPTPHEISQILNDYVIGQYQAKKVLSVAVYNHYRRL--ESGHQK-------------- 99
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVESI+ K
Sbjct: 100 -DEVELNKSNILLIGPTGSGKTLLAQTLARLLDVPFAIADATTLTEAGYVGEDVESIVLK 158
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL D + A++GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV N+P
Sbjct: 159 LLQRCDNDAEKAERGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTVANIPP 218
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVT 501
+G RKHP D IQ+DT ILFI GGAF ++K I +R + + IGF A V++ + V+
Sbjct: 219 QGGRKHPNQDMIQVDTSKILFIVGGAFEGLDKIIEQRTEKNIGIGFSAEVKSQDKKATVS 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ + +E DL+ +GLIPEFVGR P+L +L L E L+Q+LTEPKNAL KQY+
Sbjct: 279 EK------FQNIEPEDLVKFGLIPEFVGRLPILAALEELDEKALIQILTEPKNALVKQYQ 332
Query: 562 KMFQMNG 568
KMF++ G
Sbjct: 333 KMFELEG 339
>gi|49475381|ref|YP_033422.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
henselae str. Houston-1]
gi|61211490|sp|Q6G3Z2.1|CLPX_BARHE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49238187|emb|CAF27397.1| ATP-dependent clp protease ATP-binding subunit clpX [Bartonella
henselae str. Houston-1]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/315 (53%), Positives = 227/315 (72%), Gaps = 25/315 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 66 PTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKS-----------------ND 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA-------PDERC 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DLI +GLIPEF+GR P++ +L L N LVQ+L++PKNAL KQY+++F+
Sbjct: 282 VGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSKPKNALVKQYQRLFE 341
Query: 566 M-NGQAAFYGKCFEI 579
M N + AF+ +
Sbjct: 342 MENVELAFHEDALRV 356
>gi|386824462|ref|ZP_10111597.1| ATP-dependent protease ATP-binding subunit ClpX [Serratia
plymuthica PRI-2C]
gi|386378673|gb|EIJ19475.1| ATP-dependent protease ATP-binding subunit ClpX [Serratia
plymuthica PRI-2C]
Length = 423
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGSGIGFGATVK------GESEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLLQAEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|301330695|ref|ZP_07223297.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 78-1]
gi|300843356|gb|EFK71116.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 78-1]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIFHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|411001053|gb|AFV98782.1| ClpX [Candidatus Snodgrassella sp. TA1_30860]
Length = 452
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 218/305 (71%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K PTP EI LD++VIGQE AKK L+VAVYNHY R+ G ++
Sbjct: 95 KLPTPAEIVANLDQYVIGQETAKKSLAVAVYNHYKRLRL-----------------GKEE 137
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE I+ KL
Sbjct: 138 GQVELSKSNILLIGPTGSGKTLLAQTLARKLDVPFVMADATTLTEAGYVGEDVEQIITKL 197
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 198 LGKCDFDVQKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 257
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + I +DT +ILFICGGAF +EK I +R + IGFGA V + V
Sbjct: 258 GGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENTNV--- 314
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L +TVE DLI +GLIPE +GR PV+ +L L E+ L+ +LTEPKNAL KQ++ +
Sbjct: 315 ---SELFQTVEPEDLIKFGLIPELIGRLPVIATLTELDEDALINILTEPKNALIKQFQAL 371
Query: 564 FQMNG 568
F M G
Sbjct: 372 FAMEG 376
>gi|338533214|ref|YP_004666548.1| ATP-dependent protease ATP-binding subunit ClpX [Myxococcus fulvus
HW-1]
gi|337259310|gb|AEI65470.1| ATP-dependent protease ATP-binding subunit ClpX [Myxococcus fulvus
HW-1]
Length = 427
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++VIGQERAKK LSVAV+NHY RI ++ S
Sbjct: 64 RIPRPSEIKAVLDEYVIGQERAKKTLSVAVHNHYKRIESKVSM----------------- 106
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+I+ L
Sbjct: 107 EDVELQKSNILLLGPTGSGKTLLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNL 166
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D+++ AQ+GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGTV NVP K
Sbjct: 167 LQAADHDIERAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKLIEGTVANVPPK 226
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +++ I R S+GFGA V++ +
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFGGLDQVIERRLGGRSLGFGAEVQSKKQRS----- 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ L++ VE DL+ +G+IPEF+GR P++ +L L E L+ +L +PKNAL KQYRK+
Sbjct: 282 --LTELLKHVEPEDLLKFGMIPEFIGRLPIITALEELDEAALINILNQPKNALTKQYRKL 339
Query: 564 FQMNG 568
F+++G
Sbjct: 340 FELDG 344
>gi|415938746|ref|ZP_11555480.1| ATP-dependent Clp protease, ATP-binding subunit [Herbaspirillum
frisingense GSF30]
gi|407759380|gb|EKF69075.1| ATP-dependent Clp protease, ATP-binding subunit [Herbaspirillum
frisingense GSF30]
Length = 421
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 217/304 (71%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI LD++VIGQ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + K IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S ++ E DL+ +GLIPE VGR PV+ +L L E L+Q+L EPKNAL KQY K+
Sbjct: 282 -NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLL 340
Query: 565 QMNG 568
QM G
Sbjct: 341 QMEG 344
>gi|376295040|ref|YP_005166270.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Desulfovibrio
desulfuricans ND132]
gi|323457601|gb|EGB13466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
desulfuricans ND132]
Length = 418
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/300 (56%), Positives = 223/300 (74%), Gaps = 21/300 (7%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVE 327
P+EI + LD++VIGQE+AKK+LSVAV+NHY R++ ++ S G D VE
Sbjct: 64 PQEIKELLDQYVIGQEQAKKILSVAVHNHYKRVFYAAAN--SGG------------DDVE 109
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
++KSNILL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL +LL +
Sbjct: 110 IDKSNILLIGPTGSGKTLLAQTLARVLKVPFAIADATTLTEAGYVGEDVENILVQLLQNA 169
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
DY++ AA +GI+YIDE+DK+ +K +S +I+RDVSGEGVQQALLK++EGT N+P KG RK
Sbjct: 170 DYDIDAASRGIIYIDEIDKVARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPPKGGRK 229
Query: 448 HPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTS 507
HP+ + I++DT +ILFI GGAF+ ++K + +R+Q S +GFGA V A G
Sbjct: 230 HPQQEFIRMDTSNILFILGGAFIGLDKIVQQRKQGSGMGFGAKVEAKKEMG-------LG 282
Query: 508 SLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
L E DLI +GLIPEFVGR PV +L LTE LV++LTEPKNAL KQYRK+F+++
Sbjct: 283 ELFGMAEPMDLIKFGLIPEFVGRIPVQTALEELTEEDLVRILTEPKNALIKQYRKLFELD 342
>gi|344996807|ref|YP_004799150.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Caldicellulosiruptor lactoaceticus 6A]
gi|343965026|gb|AEM74173.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Caldicellulosiruptor lactoaceticus 6A]
Length = 432
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 227/310 (73%), Gaps = 23/310 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
+ ++ PTPKEI + LD++V+GQ+ AKK+LSVAVYNHY RIY ++K
Sbjct: 54 NEFDDRLPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK----------- 102
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
D VEL+KSNIL++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 103 -----DDVELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVEN 157
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
IL +L+ +DY++ A++GI+YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGT+
Sbjct: 158 ILLRLIQNADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIA 217
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP + IQIDT +ILFICGGAF IEK I +R + ++GF A + +
Sbjct: 218 SVPPQGGRKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKK--- 274
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
++ + DL+ +G+IPEF+GR P++V+L AL + L+++LTEPKNAL K
Sbjct: 275 ----EKKIGDILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVK 330
Query: 559 QYRKMFQMNG 568
QY+K+F M+G
Sbjct: 331 QYQKLFAMDG 340
>gi|197335469|ref|YP_002155558.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio fischeri
MJ11]
gi|238690274|sp|B5FBZ9.1|CLPX_VIBFM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|197316959|gb|ACH66406.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
fischeri MJ11]
Length = 428
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/318 (53%), Positives = 223/318 (70%), Gaps = 23/318 (7%)
Query: 252 KDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAG 311
KD + PTP+ I + LD +VIGQE AKKVL+VAVYNHY R+ N + K
Sbjct: 54 KDNTLSPKESSEELPTPRNIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTK---- 109
Query: 312 ESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
D VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGY
Sbjct: 110 ------------DGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGY 157
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
VGEDVE+I+ KLL DY+ A A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK
Sbjct: 158 VGEDVENIIQKLLQKCDYDPAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLK 217
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAP 490
++EGT+ +VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA
Sbjct: 218 LIEGTIASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAD 277
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
VR+ + D L + +E DL+ +GLIPEF+GR PV +L L E LVQ+L+
Sbjct: 278 VRSKDNEATIGD------LFKQIEPEDLVKFGLIPEFIGRLPVTTTLTELDEEALVQILS 331
Query: 551 EPKNALGKQYRKMFQMNG 568
+PKNAL KQY +F + G
Sbjct: 332 QPKNALTKQYGALFDLEG 349
>gi|123443341|ref|YP_001007315.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420257506|ref|ZP_14760263.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|6225174|sp|O33873.1|CLPX_YEREN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215219|sp|A1JNN1.1|CLPX_YERE8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|2580495|gb|AAC45783.1| ClpX [Yersinia enterocolitica]
gi|122090302|emb|CAL13168.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404515020|gb|EKA28798.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 423
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEPAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGATVK------GKSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLRQAEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|405365023|ref|ZP_11026469.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Chondromyces
apiculatus DSM 436]
gi|397089588|gb|EJJ20497.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 427
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 221/305 (72%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++VIGQERAKK LSVAV+NHY RI ES D
Sbjct: 64 RIPRPSEIKAVLDEYVIGQERAKKTLSVAVHNHYKRI-----------ESKVAMED---- 108
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+I+ L
Sbjct: 109 --VELQKSNILLLGPTGSGKTLLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNL 166
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D+++ AQ+GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGTV NVP K
Sbjct: 167 LQAADHDIERAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKLIEGTVANVPPK 226
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +++ I R S+GFGA V++ +
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFGGLDQVIERRMGGRSLGFGADVQSKKQRS----- 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ L++ VE DL+ +G+IPEF+GR P++ +L L E L+ +L +PKNAL KQYRK+
Sbjct: 282 --LTELLKHVEPEDLLKFGMIPEFIGRLPIITALEELDEAALINILNQPKNALTKQYRKL 339
Query: 564 FQMNG 568
F+++G
Sbjct: 340 FELDG 344
>gi|344339621|ref|ZP_08770549.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiocapsa
marina 5811]
gi|343800357|gb|EGV18303.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiocapsa
marina 5811]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 219/306 (71%), Gaps = 23/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N P P+EI LD+FVIGQE+AKKVLSVAVYNHY R+ E + D
Sbjct: 63 NNLPKPREINARLDEFVIGQEQAKKVLSVAVYNHYKRL-----------EVAEAKED--- 108
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+E+ KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 ---IEIAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFI GGAF ++K I R + + IGF A V + D
Sbjct: 226 QGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIQNRSRKTGIGFSAEVHSQ------DD 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L VE DLI YGLIPEFVGR PV+ +L L E L+++LTEPK+AL KQY++
Sbjct: 280 RRQIGELFSAVEPEDLIRYGLIPEFVGRLPVMATLEELDEPALMRILTEPKHALVKQYQR 339
Query: 563 MFQMNG 568
+F+M G
Sbjct: 340 LFEMEG 345
>gi|262380155|ref|ZP_06073310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SH164]
gi|262298349|gb|EEY86263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SH164]
Length = 438
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/314 (53%), Positives = 224/314 (71%), Gaps = 23/314 (7%)
Query: 254 GCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGES 313
G W L P P EI LD++VIGQ+ AKK LSVAVYNHY R+ + ++
Sbjct: 53 GDWASRPL----PKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRLKVSQNGHKT---- 104
Query: 314 SSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVG 373
+D VE+ KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVG
Sbjct: 105 ---------EDKVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVG 155
Query: 374 EDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 433
EDVE+I+ KLL +DY++ AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+
Sbjct: 156 EDVENIVQKLLQKADYDIEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMI 215
Query: 434 EGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA 493
EGTV ++P +G RKHP+ + IQ+DT ++LFICGGAF +EK + R++ IGF A V++
Sbjct: 216 EGTVASIPPQGGRKHPQQEFIQVDTSNVLFICGGAFSGLEKIVQHRQEKGGIGFTAEVKS 275
Query: 494 NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPK 553
+ + L VE +DL+ +GLIPEF+GR PV+ +L L E+ L+Q+LTEPK
Sbjct: 276 KDETKKLAE------LFRQVEPADLVKFGLIPEFIGRLPVIATLEELDEDALMQILTEPK 329
Query: 554 NALGKQYRKMFQMN 567
NAL +QY+ +F M
Sbjct: 330 NALTRQYQYLFNME 343
>gi|163781837|ref|ZP_02176837.1| ATP-dependent protease ATP-binding subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883057|gb|EDP76561.1| ATP-dependent protease ATP-binding subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 413
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 223/306 (72%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+ I LD++VIGQERAKKVLSVAVYNHY RI + + G+D D
Sbjct: 60 LPTPERIKSILDEYVIGQERAKKVLSVAVYNHYKRIKAKEA--------------GLDLD 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VE+EKSNILL+GPTGSGKTL+AKTLA+ +NVPF IADAT+LT+AGYVGEDVE++L +LL
Sbjct: 106 GVEVEKSNILLIGPTGSGKTLMAKTLAKILNVPFAIADATSLTEAGYVGEDVENVLTRLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTVVNVPE 442
Y+V AAQ+GIVYIDE+DK+ KK+ +N I+RDVSGEGVQQ+LLK++EGTV NVP
Sbjct: 166 QNCGYDVDAAQKGIVYIDEIDKVAKKS-GINPSITRDVSGEGVQQSLLKIIEGTVANVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQIDT DILFICGGAFV +E+ I R S++GF + ++ V
Sbjct: 225 QGGRKHPHQEFIQIDTTDILFICGGAFVGLEEIIKHRIGKSTMGFESSIKKVEEEDNV-- 282
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ VE DLI +GLIPEFVGR PV+ +L LT+ LV++L EPKNAL KQY+K
Sbjct: 283 -------VALVEPDDLIKFGLIPEFVGRLPVITTLDELTQEDLVRILVEPKNALVKQYKK 335
Query: 563 MFQMNG 568
+F+++G
Sbjct: 336 LFEIDG 341
>gi|334123166|ref|ZP_08497195.1| ATP-dependent Clp protease ATP-binding subunit [Enterobacter
hormaechei ATCC 49162]
gi|449472610|ref|XP_004153646.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
gi|333391040|gb|EGK62163.1| ATP-dependent Clp protease ATP-binding subunit [Enterobacter
hormaechei ATCC 49162]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAT------SEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 PNEGQLLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|456063264|ref|YP_007502234.1| ATP-dependent protease ATP-binding subunit [beta proteobacterium
CB]
gi|455440561|gb|AGG33499.1| ATP-dependent protease ATP-binding subunit [beta proteobacterium
CB]
Length = 453
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/317 (54%), Positives = 220/317 (69%), Gaps = 18/317 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ PTP +I + LD++VIGQ+ AKK L+VAVYNHY R+ K+ + + D
Sbjct: 63 DSLPTPHQIRENLDQYVIGQDHAKKTLAVAVYNHYKRLQYLPKPKKEKLDKDGKPVEPAD 122
Query: 323 D-----------DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGY 371
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGY
Sbjct: 123 KKESKVPAKAMVDGVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGY 182
Query: 372 VGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 431
VGEDVE+I+ KLL DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 183 VGEDVENIIQKLLQACDYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 242
Query: 432 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPV 491
++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I +R + IGF A V
Sbjct: 243 LVEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIQQRTAKTGIGFNATV 302
Query: 492 RANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTE 551
G S L+ VE DLI +GLIPE +GR PV+ +L L E L+Q+LTE
Sbjct: 303 PGKDDRG-------VSDLLIEVEPEDLIKFGLIPELIGRLPVVATLAQLDETALIQILTE 355
Query: 552 PKNALGKQYRKMFQMNG 568
PKNAL KQY+ + M G
Sbjct: 356 PKNALVKQYQALLTMEG 372
>gi|323498277|ref|ZP_08103279.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sinaloensis
DSM 21326]
gi|323316705|gb|EGA69714.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sinaloensis
DSM 21326]
Length = 427
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 222/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPAPREIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKDETKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E+ L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEDALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|322515315|ref|ZP_08068312.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
ureae ATCC 25976]
gi|322118691|gb|EFX90903.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
ureae ATCC 25976]
Length = 419
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 220/305 (72%), Gaps = 22/305 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNE-SSQKRSAGESSSCTTDGVDDD 324
PTP EI LD++VIGQE AKKVLSVAVYNHY R+ N S K + G
Sbjct: 65 PTPHEIHAHLDEYVIGQEHAKKVLSVAVYNHYKRLRNALSGHKETNG------------- 111
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLTQAGYVGEDVE+++ KLL
Sbjct: 112 -VELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLL 170
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
D++ A++GIV+IDE+DKIT+K+ES +I+RDVSGEGVQQALLK++EGTV N+ +G
Sbjct: 171 MKCDFDAEQAERGIVFIDEIDKITRKSESPSITRDVSGEGVQQALLKLIEGTVANINPQG 230
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
+RKHP+G+ I +DT ILFICGGAF ++K + R + IGFGA ++ + +T+
Sbjct: 231 SRKHPKGETIPVDTSKILFICGGAFAGLDKLVEARTNKQGGIGFGAELKKDKEREDLTE- 289
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L + VE DL+ +GLIPE +GR PV+ L L E L+Q+LTEPKNA+ KQY+ +
Sbjct: 290 -----LFKQVEPEDLVRFGLIPELIGRLPVVTPLPELDEEALIQILTEPKNAIIKQYQAL 344
Query: 564 FQMNG 568
FQM G
Sbjct: 345 FQMEG 349
>gi|269138348|ref|YP_003295048.1| ATP-dependent protease Clp, ATPase [Edwardsiella tarda EIB202]
gi|387867067|ref|YP_005698536.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Edwardsiella
tarda FL6-60]
gi|267984008|gb|ACY83837.1| ATP-dependent protease Clp, ATPase subunit [Edwardsiella tarda
EIB202]
gi|304558380|gb|ADM41044.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Edwardsiella
tarda FL6-60]
Length = 423
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 221/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA V+ G D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGTGIGFGAKVK------GKADK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L+ VE DLI +GLIPEF+GR PV+ +L L E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASESELLGQVEPEDLIKFGLIPEFIGRLPVVATLKELDEAALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FGLEG 345
>gi|254507763|ref|ZP_05119894.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus 16]
gi|219549288|gb|EED26282.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus 16]
Length = 427
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 222/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD +VIGQ+ AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPAPREIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ V
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKDETKTV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L VE DL+ YGLIPEF+GR PV +L L E+ L+Q+L EPKNAL KQY +
Sbjct: 286 ---GELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEDALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|401762533|ref|YP_006577540.1| ATP-dependent Clp protease ATP-binding subunit clpX [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400174067|gb|AFP68916.1| ATP-dependent Clp protease ATP-binding subunit clpX [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 224/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A+ ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAS------SEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 PNEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|366162939|ref|ZP_09462694.1| ATP-dependent protease ATP-binding subunit ClpX [Acetivibrio
cellulolyticus CD2]
Length = 431
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N P P EI + LD++VIGQE AKK LSVAVYNHY RI TD +
Sbjct: 59 NDVPKPAEIKEILDQYVIGQESAKKSLSVAVYNHYKRI----------------NTD-IK 101
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL+KSNI+++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL K
Sbjct: 102 GSDVELQKSNIIMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLK 161
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
L+ +DY++ A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP
Sbjct: 162 LIQAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPP 221
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQIDT +ILFICGGAF I+K I R S+GFGA + +
Sbjct: 222 QGGRKHPHQEFIQIDTTNILFICGGAFDGIDKIIQNRIGKKSMGFGAKIESQ-------K 274
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ +++ + DL+ +GLIPEFVGR PV+VSL +L + L+Q+LTEPKNAL KQY+K
Sbjct: 275 TIDMGEILKHIYPQDLLKFGLIPEFVGRLPVMVSLQSLDKAALIQILTEPKNALVKQYQK 334
Query: 563 MFQMN 567
+F+M+
Sbjct: 335 LFEMD 339
>gi|334344658|ref|YP_004553210.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sphingobium
chlorophenolicum L-1]
gi|334101280|gb|AEG48704.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sphingobium
chlorophenolicum L-1]
Length = 422
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/317 (55%), Positives = 221/317 (69%), Gaps = 26/317 (8%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
+K G G + G PTP+EIC LD +VIGQ RAK+VLSVAV+NHY R+ +
Sbjct: 52 TKGGLVGKKDGG--VPTPQEICDVLDDYVIGQNRAKRVLSVAVHNHYKRLNH-------- 101
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
G VEL KSNILL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+AG
Sbjct: 102 ---------GTKPGEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEAG 152
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+I+ KLL SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALL
Sbjct: 153 YVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALL 212
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I +R + SIGFGA
Sbjct: 213 KLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGAH 272
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
V A + T L+ E DL+ +GLIPEFVGR PV+ +L L LV++L
Sbjct: 273 VAA-------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 551 EPKNALGKQYRKMFQMN 567
EPKNAL KQY K+F M
Sbjct: 326 EPKNALVKQYAKLFDME 342
>gi|91783521|ref|YP_558727.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
xenovorans LB400]
gi|123358810|sp|Q13Z14.1|CLPX_BURXL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91687475|gb|ABE30675.1| ClpX, ATPase regulatory subunit [Burkholderia xenovorans LB400]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/333 (53%), Positives = 233/333 (69%), Gaps = 35/333 (10%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
++R +G+G +G S+L P+P+EI + LD++VIGQERAKK+L+VAVYN
Sbjct: 46 EIIRDEAAGAGIEAG-----LSKSDL----PSPQEIREILDQYVIGQERAKKILAVAVYN 96
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + + D +EL KSNILL+GPTGSGKTLLA+TLAR +N
Sbjct: 97 HYKRLKHLDKK-----------------DEIELSKSNILLIGPTGSGKTLLAQTLARLLN 139
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPFVIADATTLT+AGYVGEDVE+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +
Sbjct: 140 VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPS 199
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF +EK
Sbjct: 200 ITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKV 259
Query: 476 ISERRQDSSIGFGAPVRANM-RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVL 534
I +R + + IGFGA V++ R G ++ VE DLI +GLIPE +GR PV+
Sbjct: 260 IVDRTEKTGIGFGASVKSKQDRDAG--------EVLREVEPEDLIKFGLIPELIGRLPVV 311
Query: 535 VSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E L+++L EPKNAL KQY K+F M
Sbjct: 312 ATLGKLDEVALMKILVEPKNALVKQYHKLFNME 344
>gi|429766107|ref|ZP_19298381.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
celatum DSM 1785]
gi|429185087|gb|EKY26076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
celatum DSM 1785]
Length = 432
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 228/304 (75%), Gaps = 26/304 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++VIGQ+RAKK LSVAVYNHY R+ ++ +DDD
Sbjct: 61 LPKPSEIKAYLDQYVIGQDRAKKALSVAVYNHYKRV----------------KSNTIDDD 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL+KSNILL+GPTGSGKTLLA+TLA+++NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 105 -IELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLI 163
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 164 QNADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 223
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA-NMRAGGVTDA 503
RKHP + IQI+T +ILFICGGAF IEK I +R + S +GFGA +++ M+ G
Sbjct: 224 GRKHPHQEFIQINTSNILFICGGAFDGIEKIIQKRTRVSQMGFGAEIQSKEMKDVG---- 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+++ + DL+ +GLIPEFVGR P++VSL +L +N L+ +L++PKNAL KQY K+
Sbjct: 280 ----EVLKNILPEDLLKFGLIPEFVGRLPMVVSLESLDQNALINILSQPKNALVKQYSKL 335
Query: 564 FQMN 567
F+++
Sbjct: 336 FEID 339
>gi|315127188|ref|YP_004069191.1| ATP-dependent protease ATP-binding subunit [Pseudoalteromonas sp.
SM9913]
gi|315015702|gb|ADT69040.1| ATP-dependent protease ATP-binding subunit [Pseudoalteromonas sp.
SM9913]
Length = 427
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/312 (55%), Positives = 226/312 (72%), Gaps = 30/312 (9%)
Query: 260 NLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTD 319
+ +K P PKEI LD +VIGQ+ AKKVLSVAVYNHY R+ N+S+++
Sbjct: 62 DAADKLPVPKEIRNHLDDYVIGQDHAKKVLSVAVYNHYKRLRNQSTKQ------------ 109
Query: 320 GVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 110 -----DVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENI 164
Query: 380 LYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +
Sbjct: 165 IQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 224
Query: 440 VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAG 498
VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFG V+
Sbjct: 225 VPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSHKNTGIGFGVDVK------ 278
Query: 499 GVTDAVVTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
++ + SL ET VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNA
Sbjct: 279 ---ESAASRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALVQILSEPKNA 335
Query: 556 LGKQYRKMFQMN 567
+ KQ+ +F M
Sbjct: 336 ITKQFSVLFGME 347
>gi|119713090|gb|ABL97159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [uncultured
marine bacterium EB0_49D07]
Length = 414
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 224/305 (73%), Gaps = 25/305 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P+P EI LD++VIGQE+AKK+LSVAVYNHY R+ + S +
Sbjct: 56 EELPSPLEIFNQLDEYVIGQEKAKKILSVAVYNHYKRLRSNSKK---------------- 99
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D +EL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 100 -DKIELQKSNVLLLGPTGSGKTLLAQTLARVLNVPFTIADATTLTEAGYVGEDVENIIQK 158
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+ A GIVYIDE+DKI +K+++ +I+RDVSGEGVQQALLK++EGTV ++P
Sbjct: 159 LLQKCDYDPDKAALGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTVASIPP 218
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + IQIDT +ILFICGGAF I++ I R +S IGFGA V+ T
Sbjct: 219 QGGRKHPQQEFIQIDTSNILFICGGAFSGIDEVIKHRTDNSGIGFGAAVKD-------TK 271
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
A V +S++ET+E DL+ +GLIPEFVGR PV+ +L L E LV++L EPKNAL QY+
Sbjct: 272 ATV-ASIVETLEPEDLVKFGLIPEFVGRLPVISTLHELDEEALVRILQEPKNALVNQYKY 330
Query: 563 MFQMN 567
+F+++
Sbjct: 331 LFEID 335
>gi|187923897|ref|YP_001895539.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
phytofirmans PsJN]
gi|385209689|ref|ZP_10036557.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. Ch1-1]
gi|238689607|sp|B2T404.1|CLPX_BURPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|187715091|gb|ACD16315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
phytofirmans PsJN]
gi|385182027|gb|EIF31303.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. Ch1-1]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/333 (53%), Positives = 233/333 (69%), Gaps = 35/333 (10%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
++R +G+G +G S+L P+P+EI + LD++VIGQERAKK+L+VAVYN
Sbjct: 46 EIIRDEAAGAGIEAG-----LSKSDL----PSPQEIREILDQYVIGQERAKKILAVAVYN 96
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + + D +EL KSNILL+GPTGSGKTLLA+TLAR +N
Sbjct: 97 HYKRLKHLDKK-----------------DEIELSKSNILLIGPTGSGKTLLAQTLARLLN 139
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPFVIADATTLT+AGYVGEDVE+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +
Sbjct: 140 VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPS 199
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF +EK
Sbjct: 200 ITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKV 259
Query: 476 ISERRQDSSIGFGAPVRANM-RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVL 534
I +R + + IGFGA V++ R G ++ VE DLI +GLIPE +GR PV+
Sbjct: 260 IVDRTEKTGIGFGASVKSKQDRDAG--------EVLREVEPEDLIKFGLIPELIGRLPVV 311
Query: 535 VSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E L+++L EPKNAL KQY K+F M
Sbjct: 312 ATLGKLDEVALMKILVEPKNALVKQYHKLFNME 344
>gi|300311894|ref|YP_003775986.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum seropedicae SmR1]
gi|300074679|gb|ADJ64078.1| ATP-dependent protease (ATP-binding specificity subunit) protein
[Herbaspirillum seropedicae SmR1]
Length = 421
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 219/304 (72%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP+EI + LD++VIGQ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPQEITELLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + + IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLARIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S ++ E DL+ +GLIPE VGR PV+ +L L E+ L+Q+L EPKNAL KQY K+
Sbjct: 282 -NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEDALIQILIEPKNALIKQYAKLL 340
Query: 565 QMNG 568
QM G
Sbjct: 341 QMEG 344
>gi|336315651|ref|ZP_08570559.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rheinheimera
sp. A13L]
gi|335879970|gb|EGM77861.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rheinheimera
sp. A13L]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 223/306 (72%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
NK P PKEI LD +VIGQE AKKVL+VAVYNHY R+ + ++
Sbjct: 64 NKLPVPKEIRAHLDDYVIGQEHAKKVLAVAVYNHYKRLRSMQHKQ--------------- 108
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 --DVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 167 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + S IGFGA VRA ++ +T
Sbjct: 227 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRCAKGSGIGFGAEVRATSQSRTLT 286
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
++ + VE DL+ YGLIPEF+GR PV+ +L L L+Q+L+EPKNAL KQ+
Sbjct: 287 ES------FKDVEPEDLVKYGLIPEFIGRLPVVATLTELDLAALMQILSEPKNALVKQFG 340
Query: 562 KMFQMN 567
+FQM
Sbjct: 341 ALFQME 346
>gi|270263571|ref|ZP_06191840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Serratia
odorifera 4Rx13]
gi|333925890|ref|YP_004499469.1| ATP-dependent Clp protease ATP-binding subunit clpX [Serratia sp.
AS12]
gi|333930843|ref|YP_004504421.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Serratia
plymuthica AS9]
gi|386327714|ref|YP_006023884.1| ATP-dependent Clp protease ATP-binding subunit clpX [Serratia sp.
AS13]
gi|421781989|ref|ZP_16218449.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Serratia
plymuthica A30]
gi|270042455|gb|EFA15550.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Serratia
odorifera 4Rx13]
gi|333472450|gb|AEF44160.1| ATP-dependent Clp protease ATP-binding subunit clpX [Serratia
plymuthica AS9]
gi|333489950|gb|AEF49112.1| ATP-dependent Clp protease ATP-binding subunit clpX [Serratia sp.
AS12]
gi|333960047|gb|AEG26820.1| ATP-dependent Clp protease ATP-binding subunit clpX [Serratia sp.
AS13]
gi|407755863|gb|EKF65986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Serratia
plymuthica A30]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGSGIGFGATVK------GESEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLLQAEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|253990890|ref|YP_003042246.1| ATP-dependent Clp protease ATP-binding subunit clpX [Photorhabdus
asymbiotica]
gi|253782340|emb|CAQ85504.1| ATP-dependent Clp protease ATP-binding subunit clpX [Photorhabdus
asymbiotica]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE AKKVL+VAVYNHY R+ N G+ S +
Sbjct: 64 LPTPHEIRQHLDDYVIGQETAKKVLAVAVYNHYKRLRN--------GDVS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSS-IGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S+ IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTSTGIGFGAKVK------GESEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLAQAEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|108761752|ref|YP_630244.1| ATP-dependent protease ATP-binding subunit ClpX [Myxococcus xanthus
DK 1622]
gi|8134368|sp|Q9X5N1.1|CLPX_MYXXA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|4838464|gb|AAD31003.1|AF127082_2 ATP-dependent protease ATPase subunit ClpX [Myxococcus xanthus
DZF1]
gi|108465632|gb|ABF90817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Myxococcus
xanthus DK 1622]
Length = 427
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 221/305 (72%), Gaps = 24/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++VIGQERAKK LSVAV+NHY RI ES D
Sbjct: 64 RIPRPSEIKAVLDEYVIGQERAKKTLSVAVHNHYKRI-----------ESKVAMED---- 108
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL+KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+I+ L
Sbjct: 109 --VELQKSNILLLGPTGSGKTLLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNL 166
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +D+++ AQ+GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGTV NVP K
Sbjct: 167 LQAADHDIERAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKLIEGTVANVPPK 226
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF +++ I R S+GFGA V++ +
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFGGLDQVIERRMGGRSLGFGADVQSKKQRS----- 281
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ L++ VE DL+ +G+IPEF+GR P++ +L L E L+ +L +PKNAL KQYRK+
Sbjct: 282 --LTELLKHVEPEDLLKFGMIPEFIGRLPIITALEELDEAALINILNQPKNALTKQYRKL 339
Query: 564 FQMNG 568
F+++G
Sbjct: 340 FELDG 344
>gi|406833188|ref|ZP_11092782.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Schlesneria
paludicola DSM 18645]
Length = 431
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/317 (53%), Positives = 225/317 (70%), Gaps = 21/317 (6%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G + L N+ P+P+EI + L+++VIGQ+R KK+LSVAV+NHY R+
Sbjct: 66 GAAKLFNRVPSPREITEHLNQYVIGQDRTKKILSVAVHNHYKRLM--------------A 111
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
T D D+ VE+EKSNI+L+GPTGSGKTL+A+TLAR + VPF I DATTLT+AGYVGEDV
Sbjct: 112 TADL--DNEVEIEKSNIMLIGPTGSGKTLMARTLARLLQVPFAIGDATTLTEAGYVGEDV 169
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E++L KLL +D+++ AAQ+GIV+IDE+DKI K +++++I+RDVSGEGVQQALLKMLEGT
Sbjct: 170 ENLLLKLLHAADFDIEAAQRGIVFIDEIDKIGKTSQNVSITRDVSGEGVQQALLKMLEGT 229
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
V NVP +G RKHP IQIDT +ILFICGG FV +E I++R +IGFGA +
Sbjct: 230 VANVPPQGGRKHPEQQYIQIDTTNILFICGGTFVGLEDIIAKRMGKRTIGFGASAAVEHQ 289
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNAL 556
+ L+ + D+I YG+IPE VGR PV+ +LL L E LV++L EPKN+L
Sbjct: 290 ----DTKSRSGKLLAQACTDDIIEYGMIPELVGRLPVVSALLPLQEEDLVKILVEPKNSL 345
Query: 557 GKQYRKMFQM-NGQAAF 572
KQY+K FQM N + F
Sbjct: 346 VKQYQKFFQMENAELEF 362
>gi|417082905|ref|ZP_11951074.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
cloneA_i1]
gi|355353089|gb|EHG02261.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
cloneA_i1]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAV NHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVSNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|390449293|ref|ZP_10234902.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
aquibiodomus RA22]
gi|389664398|gb|EIM75893.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
aquibiodomus RA22]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/309 (55%), Positives = 226/309 (73%), Gaps = 25/309 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI + LD +VIGQ AK+VLSVAV+NHY R+ + S +
Sbjct: 66 PTPQEIIEVLDDYVIGQGHAKRVLSVAVHNHYKRLAHASK-----------------NAD 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ IS+R + +SIGFGA V + +
Sbjct: 229 RKHPQQEFLQVDTANILFICGGAFAGLDRIISDRGRKTSIGFGATVAS-------PEDRP 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
T L VE DL+ +GLIPEFVGR PVL +L L E LVQ+L+EPKNAL KQY+++F
Sbjct: 282 TGELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILSEPKNALVKQYQRLFD 341
Query: 566 M-NGQAAFY 573
M N + F+
Sbjct: 342 MENVELTFH 350
>gi|340383774|ref|XP_003390391.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX
2-like [Amphimedon queenslandica]
Length = 442
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 220/306 (71%), Gaps = 22/306 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P PKEI + LD++VIGQ AKKVLSVAVYNHY R+ E G +
Sbjct: 64 KPPVPKEINRILDEYVIGQSHAKKVLSVAVYNHYKRLALEG---------------GDEK 108
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ V+L KSN+LL+GPTG GKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 NEVDLSKSNVLLIGPTGCGKTLLAETLARLLDVPFAIADATTLTEAGYVGEDVENIIQKL 168
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L D++V AQ GIVYIDE+DK+ +K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 169 LQKCDHDVKKAQTGIVYIDEIDKVARKSDNPSITRDVSGEGVQQALLKLVEGTVASVPPQ 228
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTD 502
G RKHP+ + +Q+DT +ILFICGGAF ++K I R Q IGFGA V+ G D
Sbjct: 229 GGRKHPQQECLQVDTSNILFICGGAFDGLDKIIERRTSQRGGIGFGADVK------GEAD 282
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ S ++ VE DL+ YGLIPEFVGR PV +L L E QL+ +LTEPKN+L QYRK
Sbjct: 283 SKRISEILSEVEPDDLVRYGLIPEFVGRLPVFTALEELDEEQLIAILTEPKNSLVNQYRK 342
Query: 563 MFQMNG 568
+F+M G
Sbjct: 343 IFKMEG 348
>gi|339639091|emb|CCC18310.1| ATP-dependent Clp protease ATP-binding subunit Cl pX [Lactobacillus
pentosus IG1]
Length = 422
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 220/304 (72%), Gaps = 16/304 (5%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPK+I LD++VIGQ AK+ LSVAVYNHY R+ K A T DG
Sbjct: 61 IPTPKQIVDELDQYVIGQNEAKRTLSVAVYNHYKRV------KAMADSDDEETEDGP--- 111
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL+KSNI L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 112 --ELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENILLKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 170 QNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + IQIDT +ILFI GGAF IE + R D +IGFG V D
Sbjct: 230 GRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTDTDGK---NAVLDD- 285
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ SLM+ V DL+ +GLIPEF+GR P+L +L LTE+ LV++LTEPKNAL KQY+++
Sbjct: 286 -SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNALVKQYQRLI 344
Query: 565 QMNG 568
++G
Sbjct: 345 ALDG 348
>gi|146310566|ref|YP_001175640.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter sp.
638]
gi|167009015|sp|A4W7A9.1|CLPX_ENT38 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145317442|gb|ABP59589.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
sp. 638]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ANEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|158321198|ref|YP_001513705.1| ATP-dependent protease ATP-binding subunit ClpX [Alkaliphilus
oremlandii OhILAs]
gi|229889849|sp|A8MIS7.1|CLPX_ALKOO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|158141397|gb|ABW19709.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alkaliphilus
oremlandii OhILAs]
Length = 426
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 222/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++VIGQE+AKK L+VAVYNHY RI + V
Sbjct: 60 LPKPSEIKDILDQYVIGQEKAKKALAVAVYNHYKRI----------------NVEDVKSG 103
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNIL++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMLGPTGSGKTLLAQTLAKIINVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY++ A++GI+YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 164 QAADYDIERAEKGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILFI GGAF I+ I +R S+GFGA + + V D
Sbjct: 224 GRKHPHQEFIQIDTTNILFIVGGAFDGIDSIIQKRTSKKSMGFGAEIESKQ----VLD-- 277
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
SL++ ++ DL+ +GLIPEFVGR PV+V+L L E L+++LTEPKNAL KQY+++F
Sbjct: 278 -LGSLLKQIQPEDLLKFGLIPEFVGRLPVVVTLEQLDEEALIKILTEPKNALTKQYKRLF 336
Query: 565 QMNG 568
+++G
Sbjct: 337 EIDG 340
>gi|90410783|ref|ZP_01218798.1| ATP-dependent protease ATP-binding subunit [Photobacterium
profundum 3TCK]
gi|90328414|gb|EAS44712.1| ATP-dependent protease ATP-binding subunit [Photobacterium
profundum 3TCK]
Length = 426
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/300 (57%), Positives = 222/300 (74%), Gaps = 23/300 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
GN+ PTP+EI LD +VIGQ AKKVL+VAVYNHY R+ N G+++S
Sbjct: 62 GNELPTPQEIRTNLDDYVIGQNHAKKVLAVAVYNHYKRLRN--------GDTTS------ 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DGVELGKSNILLIGPTGSGKTLLAETLARMLDVPFTMADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+VA A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVAKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGV 500
+G RKHP+ + +Q+DT ILFICGGAF ++K + +R + IGFGA VR+ +
Sbjct: 226 PQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVEQRVATGTGIGFGADVRSKSEERTI 285
Query: 501 TDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQY 560
+D L + VE DL+ YGLIPEF+GR PV +L L ++ LVQ+L EPKNAL KQY
Sbjct: 286 SD------LFKKVEPEDLVKYGLIPEFIGRLPVTATLTELDQDALVQILREPKNALTKQY 339
>gi|50120088|ref|YP_049255.1| ATP-dependent protease ATP-binding subunit ClpX [Pectobacterium
atrosepticum SCRI1043]
gi|61211478|sp|Q6D826.1|CLPX_ERWCT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49610614|emb|CAG74059.1| ATP-dependent Clp protease ATP-binding subunit [Pectobacterium
atrosepticum SCRI1043]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 225/306 (73%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N G+SS +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDSS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS--SIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I E+R D+ IGF A V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK------GSAE 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+
Sbjct: 280 KATEGELLSHVEPGDLIKFGLIPEFIGRLPVVATLRELSEDALIQILREPKNALTKQYQA 339
Query: 563 MFQMNG 568
+F + G
Sbjct: 340 LFNLEG 345
>gi|395792322|ref|ZP_10471760.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|423714327|ref|ZP_17688586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395420711|gb|EJF86976.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395432836|gb|EJF98811.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/315 (53%), Positives = 227/315 (72%), Gaps = 25/315 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 66 PTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKS-----------------ND 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKAENPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA-------PDERC 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DLI +GLIPEF+GR P++ +L L + LVQ+L++PKNAL KQY+++F+
Sbjct: 282 VGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVHALVQILSQPKNALVKQYQRLFE 341
Query: 566 M-NGQAAFYGKCFEI 579
M N + AF+ +
Sbjct: 342 MENVELAFHEDALRV 356
>gi|251790647|ref|YP_003005368.1| ATP-dependent protease ATP-binding subunit ClpX [Dickeya zeae
Ech1591]
gi|247539268|gb|ACT07889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya zeae
Ech1591]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 224/306 (73%), Gaps = 26/306 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ T+DG ++
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLR---------------TSDG--NN 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS--SIGFGAPVRANMRAGGVTD 502
RKHP+ + +Q+DT ILFICGGAF ++K I E+R D+ IGF A V+ GV+
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK------GVSQ 279
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
L+ VE DLI +GLIPEF+GR PV+ +L L E L+Q+L EPKNAL KQY+
Sbjct: 280 KATEGELLSQVEPGDLIKFGLIPEFIGRLPVVATLKELDEEALIQILREPKNALTKQYQA 339
Query: 563 MFQMNG 568
+F++ G
Sbjct: 340 LFKLEG 345
>gi|451941813|ref|YP_007462450.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901200|gb|AGF75662.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/315 (53%), Positives = 227/315 (72%), Gaps = 25/315 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 66 PTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKS-----------------ND 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKAENPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA-------PDERC 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DLI +GLIPEF+GR P++ +L L + LVQ+L++PKNAL KQY+++F+
Sbjct: 282 VGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVHALVQILSQPKNALVKQYQRLFE 341
Query: 566 M-NGQAAFYGKCFEI 579
M N + AF+ +
Sbjct: 342 MENVELAFHEDALRV 356
>gi|359407411|ref|ZP_09199888.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [SAR116
cluster alpha proteobacterium HIMB100]
gi|356677450|gb|EHI49794.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [SAR116
cluster alpha proteobacterium HIMB100]
Length = 421
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 223/303 (73%), Gaps = 24/303 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P +I K LD +VIGQ +AK++LSVAV+NHY R+ NE T D
Sbjct: 63 PSPSDINKVLDDYVIGQTKAKRILSVAVHNHYKRLANEGK-----------TGD------ 105
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+E++KSNILL+GPTG GKTLLA++LAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 LEIQKSNILLVGPTGCGKTLLAQSLARMLDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
SDYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 ASDYNVEKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + IGFGA VR
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLDKLISSRNSGAGIGFGADVRDPEDRN------- 278
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
S ++ +E DLI +GLIPEF+GR PV+ +L L E+ LV++LTEPKNAL KQY+ +F
Sbjct: 279 LSQILVDLEPEDLIKFGLIPEFIGRLPVIATLEDLDEDALVRILTEPKNALTKQYKALFD 338
Query: 566 MNG 568
M+G
Sbjct: 339 MDG 341
>gi|298529125|ref|ZP_07016528.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfonatronospira thiodismutans ASO3-1]
gi|298510561|gb|EFI34464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfonatronospira thiodismutans ASO3-1]
Length = 417
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 223/306 (72%), Gaps = 23/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+ P E+ K LD +V+GQE+ KK+L+VAVYNHY R+ QK
Sbjct: 59 GDTLLPPSELKKALDDYVVGQEKTKKLLAVAVYNHYKRVRYIKKQK-------------- 104
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL+KSNILL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 105 --DDVELDKSNILLIGPTGSGKTLLAQTLARVLKVPFAIADATTLTEAGYVGEDVENILV 162
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
+L+ +DY++ AA +GI+Y+DE+DKI +K++S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 163 QLMQNADYDLEAASKGIIYVDEIDKIARKSDSPSITRDVSGEGVQQALLKIIEGTEANIP 222
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
KG RKHP+ + I++DT +ILFI GGAF+ ++K + ER Q S+GFGA + + A
Sbjct: 223 PKGGRKHPQQEFIRMDTSNILFIAGGAFIGMDKIVRERVQKGSMGFGAELGSQFGA---- 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ +DLI YGLIPEFVGR PV+ SL LTE+ LV++LTEPKNAL KQY+
Sbjct: 279 ---TPNELISMAHPADLIKYGLIPEFVGRIPVVSSLEELTEDDLVRILTEPKNALVKQYQ 335
Query: 562 KMFQMN 567
KMF+++
Sbjct: 336 KMFELD 341
>gi|7594817|dbj|BAA94669.1| ATPase subunit [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+ AVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAXAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|88705173|ref|ZP_01102885.1| ATP-dependent Clp protease ATP-binding subunit clpX [Congregibacter
litoralis KT71]
gi|88700868|gb|EAQ97975.1| ATP-dependent Clp protease ATP-binding subunit clpX [Congregibacter
litoralis KT71]
Length = 375
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 218/305 (71%), Gaps = 22/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
K P P EI LD++VIGQ+RAKKVLSVAVYNHY R+ R G S
Sbjct: 11 EKLPVPVEINAILDEYVIGQQRAKKVLSVAVYNHYKRL-------RHGGSKS-------- 55
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 56 -DDVELGKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQK 114
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 115 LLQKCDYDVEKAQVGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 174
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA V + V +
Sbjct: 175 QGGRKHPQQEFLQVDTSSILFICGGAFAGLDKVIRDRSEKGGIGFGAEVHSKDATRNVGE 234
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ +E DL+ YGLIPEFVGR PV+ +L L LVQ+LTEPKN+L KQY K
Sbjct: 235 VLF------DLEPEDLVQYGLIPEFVGRLPVIATLEELDVPALVQILTEPKNSLTKQYSK 288
Query: 563 MFQMN 567
+F+M
Sbjct: 289 LFEME 293
>gi|332981497|ref|YP_004462938.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Mahella
australiensis 50-1 BON]
gi|332699175|gb|AEE96116.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Mahella
australiensis 50-1 BON]
Length = 428
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 221/304 (72%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P EI LD++V+GQE AKK LSVAVYNHY RI +S +DGV
Sbjct: 60 LPKPAEIKAILDQYVVGQEDAKKTLSVAVYNHYKRI------------NSDVKSDGV--- 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
EL+KSNI+++GPTGSGKTLLA+TLAR +NVPF +ADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 --ELQKSNIIMLGPTGSGKTLLAQTLARILNVPFAMADATSLTEAGYVGEDVENILLKLI 162
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 163 QAADYDVEKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILFICGGAF I+K I R + ++GFGA ++
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFDGIDKIIQNRLGEKAMGFGAEIKTKKEQD------ 276
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L++ + DL+ +GLIPE VGR P++V+L AL + L+ +LTEPKNAL KQY+K+F
Sbjct: 277 -VGELLKHIMPQDLLKFGLIPEMVGRLPIIVTLHALDKKALMTILTEPKNALIKQYQKLF 335
Query: 565 QMNG 568
+M+G
Sbjct: 336 EMDG 339
>gi|332160750|ref|YP_004297327.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386309497|ref|YP_006005553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418242376|ref|ZP_12868888.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433550573|ref|ZP_20506617.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica IP 10393]
gi|318604629|emb|CBY26127.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664980|gb|ADZ41624.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859949|emb|CBX70278.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
enterocolitica W22703]
gi|351778210|gb|EHB20377.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431789708|emb|CCO69657.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica IP 10393]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD +VIGQE AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEPAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGFGA V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGATVK------GKSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLSQAEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|443316647|ref|ZP_21046083.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Leptolyngbya
sp. PCC 6406]
gi|442783733|gb|ELR93637.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Leptolyngbya
sp. PCC 6406]
Length = 445
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/309 (55%), Positives = 222/309 (71%), Gaps = 24/309 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P+EI K LD+ VIGQ+ AKKVLSVAVYNHY R+ + ++ G
Sbjct: 77 TQIPKPREIKKHLDEHVIGQDDAKKVLSVAVYNHYKRLSHLQNRGNEGG----------- 125
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D+ +EL+K+NILL+GPTG GKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 126 DEPIELQKANILLIGPTGCGKTLLAQTLAKILEVPFAVADATTLTEAGYVGEDVENILLR 185
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 186 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 245
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP----VRANMRAG 498
+G RKHP D IQIDT +ILFICGGAFV +EK + +R SIGF P V + RA
Sbjct: 246 QGGRKHPYQDCIQIDTSNILFICGGAFVGLEKMVEQRTGKKSIGFVQPGDSQVSRDKRA- 304
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+ +++ +E DL+ YG+IPEF+GR P L + L E LV +LTEPKNAL K
Sbjct: 305 --------ADILKDLEPEDLVKYGMIPEFIGRIPALSVVDPLDEEALVAILTEPKNALIK 356
Query: 559 QYRKMFQMN 567
Q++K+ +M+
Sbjct: 357 QFQKLMRMD 365
>gi|116747550|ref|YP_844237.1| ATP-dependent protease ATP-binding subunit ClpX [Syntrophobacter
fumaroxidans MPOB]
gi|116696614|gb|ABK15802.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophobacter fumaroxidans MPOB]
Length = 417
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 223/304 (73%), Gaps = 24/304 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P EI LD++VIGQ+RAKK+LSVAV+NHY RI + +D
Sbjct: 61 QIPKPAEIKAILDQYVIGQDRAKKILSVAVHNHYKRIELK-----------------IDK 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+ VEL+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL L
Sbjct: 104 NDVELQKSNILMIGPTGSGKTLLAQTLARILNVPFTIADATTLTEAGYVGEDVENILVSL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A +GIVYIDE+DKI KK++S +I+RDVSGEGVQQALLK+LEGTV NVP K
Sbjct: 164 IQAADYDIEKASRGIVYIDEIDKIAKKSDSPSITRDVSGEGVQQALLKILEGTVANVPPK 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + I+IDT +ILFICGGAF +E I R +GFGA +R+ D
Sbjct: 224 GGRKHPQQEFIKIDTTNILFICGGAFNYLETIIQSRVGVKGMGFGAEIRSK------EDK 277
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
V L++ V+ DL+ +G+IPEFVGR PV+ +L LTE++LV +LTEPKNAL KQY+K+
Sbjct: 278 SVGEILIK-VQPEDLLKFGMIPEFVGRLPVIATLNELTEDELVSILTEPKNALVKQYKKL 336
Query: 564 FQMN 567
F++
Sbjct: 337 FELE 340
>gi|445496994|ref|ZP_21463849.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. HH01]
gi|444786989|gb|ELX08537.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. HH01]
Length = 422
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 216/304 (71%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD++VIGQ+ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPHEIKDLLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + K IS R + S IGF A V++
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKVISNRSEKSGIGFSASVKSKKERSA----- 282
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
S ++ E DLI +GLIPE VGR PV+ +L LTE L+Q+L EPKNAL KQY K+
Sbjct: 283 --SDVLLEAEPEDLIKFGLIPELVGRLPVVATLSELTEEALIQILVEPKNALVKQYAKLL 340
Query: 565 QMNG 568
M G
Sbjct: 341 DMEG 344
>gi|227500203|ref|ZP_03930272.1| ATP dependent protease ATP-binding subunit [Anaerococcus tetradius
ATCC 35098]
gi|227217725|gb|EEI83029.1| ATP dependent protease ATP-binding subunit [Anaerococcus tetradius
ATCC 35098]
Length = 404
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/305 (54%), Positives = 222/305 (72%), Gaps = 28/305 (9%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ TPKEI + LD +VIGQ+ AKK LSVAVYNHY RI + +D
Sbjct: 59 ELSTPKEIKEFLDSYVIGQDDAKKTLSVAVYNHYKRINSNE-----------------ED 101
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
+EL+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+I+ KL
Sbjct: 102 SEIELQKSNILMLGPTGSGKTLLAQTLARKLNVPFAIADATSLTEAGYVGEDVENIILKL 161
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GI+Y+DE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT NVP +
Sbjct: 162 VQAADYDIELAERGIIYVDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTEANVPPQ 221
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQ+DT +ILFI GGAF IE I+ R + +IGFGA V N +A
Sbjct: 222 GGRKHPSQEYIQVDTTNILFILGGAFDGIEDIINRRLSEKTIGFGASVSKNAKAS----- 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ V + DL+ YGLIPEF+GR P++VSL AL + LVQ+L EPKN+ KQY+K+
Sbjct: 277 ------LKEVNTEDLLKYGLIPEFIGRVPIIVSLDALEIDSLVQILKEPKNSFVKQYQKL 330
Query: 564 FQMNG 568
F+++G
Sbjct: 331 FELDG 335
>gi|114707245|ref|ZP_01440143.1| ATP-dependent protease ATP-binding subunit [Fulvimarina pelagi
HTCC2506]
gi|114537441|gb|EAU40567.1| ATP-dependent protease ATP-binding subunit [Fulvimarina pelagi
HTCC2506]
Length = 422
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 221/302 (73%), Gaps = 24/302 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P+EI LD +VIGQ AKKVLSVAV+NHY R+ + S ++
Sbjct: 64 PSPQEIIAVLDDYVIGQAYAKKVLSVAVHNHYKRLAHASK-----------------NND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ IS+R + +SIGF A V A D
Sbjct: 227 RKHPQQEFLQVDTANILFICGGAFAGLDRIISDRGRKTSIGFAANVEA-------PDERK 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ L VE DL+ +GLIPEFVGR PVL +L L E LVQ+L EPKNAL KQY+++F+
Sbjct: 280 SGELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILREPKNALVKQYQRLFE 339
Query: 566 MN 567
M
Sbjct: 340 ME 341
>gi|336449970|ref|ZP_08620427.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Idiomarina
sp. A28L]
gi|336283127|gb|EGN76334.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Idiomarina
sp. A28L]
Length = 425
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 225/306 (73%), Gaps = 25/306 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTPKEI + LD +VIGQ+ AK+VL+VAVYNHY R+ N GV
Sbjct: 64 DQLPTPKEIRQHLDDYVIGQDHAKRVLAVAVYNHYKRLRNA----------------GVH 107
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D+ +EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 DN-IELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+ A A++GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDAAKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILF+CGGAF +EK + +R S IGFGA ++++ + V
Sbjct: 227 QGGRKHPQQEFVQVDTSKILFVCGGAFSGLEKVVQQRLATGSGIGFGAKLKSSSDSNQV- 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+L+ VE DL+ YGLIPEF+GR PVL SL L E+ LVQ+L EPKNA+ KQY
Sbjct: 286 ------NLLTQVEPEDLVKYGLIPEFIGRLPVLASLTELDEDALVQILGEPKNAITKQYA 339
Query: 562 KMFQMN 567
+ M
Sbjct: 340 ALLDME 345
>gi|153831438|ref|ZP_01984105.1| ATP-dependent Clp protease, ATP-binding subunit ClpX, partial
[Vibrio cholerae 623-39]
gi|148873080|gb|EDL71215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae 623-39]
Length = 391
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 223/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 30 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDTTS--------E 73
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 74 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 133
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 134 QKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 193
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ ++
Sbjct: 194 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK------DNS 247
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 248 KTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAAL 307
Query: 564 FQMN 567
F++
Sbjct: 308 FELE 311
>gi|410636603|ref|ZP_11347196.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
lipolytica E3]
gi|410143885|dbj|GAC14401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
lipolytica E3]
Length = 425
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 220/306 (71%), Gaps = 24/306 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P PKEI LD++VIGQE AKKVLSVAVYNHY R+ + G
Sbjct: 63 DALPKPKEIHAHLDEYVIGQEHAKKVLSVAVYNHYKRLRS-----------------GDV 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ +EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 HEGIELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGFGA V+
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAAVGSGIGFGATVKNK------D 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
D ++ L + VE DL+ YGLIPEF+GR PVL SL L+E+ L+Q+L EPKNAL KQY
Sbjct: 280 DKKASNELFKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEDALIQILQEPKNALTKQYG 339
Query: 562 KMFQMN 567
+F M
Sbjct: 340 ALFAME 345
>gi|336325184|ref|YP_004605150.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
gi|336101166|gb|AEI08986.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
Length = 424
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 225/306 (73%), Gaps = 18/306 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ P P EI K LD +VIGQ+ AK+ L+VAVYNHY RI E + +AG S
Sbjct: 57 DQLPKPSEIAKFLDTYVIGQDEAKRTLAVAVYNHYKRIKVEEA---NAGARRS------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD VEL KSNIL++GPTGSGKT LA++LAR ++VPF IADAT+LT+AGYVGEDVE+IL K
Sbjct: 107 DDEVELSKSNILMLGPTGSGKTYLAQSLARKLDVPFAIADATSLTEAGYVGEDVENILLK 166
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +D++VA AQ+GI+Y+DEVDKI++K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP
Sbjct: 167 LLQAADFDVAKAQRGIIYVDEVDKISRKSENPSITRDVSGEGVQQALLKILEGTVASVPP 226
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQ DTK++LFI GAF +EK ISERR +GFGA + G D
Sbjct: 227 QGGRKHPNQEFIQFDTKNVLFIVAGAFAGLEKVISERRGKKGLGFGAEI------SGKKD 280
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+ + VE DL+ +GLIPE +GR PV+ + L E+ LV+VLTEPKN+L +QY++
Sbjct: 281 E--EPNPFQFVEPEDLVKFGLIPELIGRLPVVTHVGHLDEDALVRVLTEPKNSLVRQYQR 338
Query: 563 MFQMNG 568
+F+M+G
Sbjct: 339 LFEMDG 344
>gi|392954371|ref|ZP_10319923.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Hydrocarboniphaga effusa AP103]
gi|391858270|gb|EIT68800.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Hydrocarboniphaga effusa AP103]
Length = 394
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 217/304 (71%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI LD++VIGQE+AKKVLSVAVYNHY R+ + SQ D
Sbjct: 34 LPKPQEIRAVLDEYVIGQEQAKKVLSVAVYNHYKRLSTKGSQ-----------------D 76
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ +LL
Sbjct: 77 GVELAKSNILLIGPTGSGKTLLAETLARLLDVPFAIADATTLTEAGYVGEDVENIIQRLL 136
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY++ AQ+GIVYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 137 QKCDYDIEKAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKLIEGTIAQVPPQG 196
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP+ + +Q++T ILFICGGAF +E+ I +R + + IGF A V++ D
Sbjct: 197 GRKHPQQEFLQVNTAGILFICGGAFAGLERVIQQRTERTGIGFSADVKSQ------KDTA 250
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + ++E DLI +GLIPEFVGR PV L L E L+ +L EPKNAL KQY K+F
Sbjct: 251 QLNKMFSSMEPDDLIRFGLIPEFVGRLPVAAILEELDEAALMSILKEPKNALVKQYAKLF 310
Query: 565 QMNG 568
QM G
Sbjct: 311 QMEG 314
>gi|337288343|ref|YP_004627815.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermodesulfobacterium sp. OPB45]
gi|334902081|gb|AEH22887.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermodesulfobacterium geofontis OPF15]
Length = 420
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 221/305 (72%), Gaps = 20/305 (6%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P EI LD++VIGQERAKK+LSVAVYNHY RI + S K+ +
Sbjct: 59 KLSKPAEIKAYLDQYVIGQERAKKILSVAVYNHYKRIEYQKSNKKHLKD----------- 107
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
VEL+K+NILL+GPTGSGKTLLA+TLA+++ VPF IADAT LT+AGYVGEDVE+IL L
Sbjct: 108 --VELQKTNILLIGPTGSGKTLLAQTLAKFLKVPFTIADATPLTEAGYVGEDVENILLYL 165
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L ++Y++ AQ+GIVYIDE+DKI KK E +I+RDVSGEGVQQALLK+LEGT+ N+P K
Sbjct: 166 LQAANYDLELAQKGIVYIDEIDKIAKKGEGPSITRDVSGEGVQQALLKILEGTIANIPPK 225
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + I++DT +ILFICGGAFV +++ I R SIGFGA ++ V D
Sbjct: 226 GGRKHPQQEYIKMDTTNILFICGGAFVGLDEIIKRRLGKGSIGFGAQIK------NVKD- 278
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ ++ V+ DLI YG IPEFVGR PV+ +L LT + LV++L EPKN++ KQY+K+
Sbjct: 279 LTLGEILSQVQPEDLIKYGFIPEFVGRLPVIATLDELTVDDLVRILVEPKNSIIKQYQKL 338
Query: 564 FQMNG 568
F+M G
Sbjct: 339 FEMEG 343
>gi|294011931|ref|YP_003545391.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
japonicum UT26S]
gi|390167377|ref|ZP_10219368.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|390167656|ref|ZP_10219637.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|292675261|dbj|BAI96779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
japonicum UT26S]
gi|389589722|gb|EIM67736.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|389590079|gb|EIM68084.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
Length = 422
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/317 (55%), Positives = 221/317 (69%), Gaps = 26/317 (8%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
+K G G + G PTP+EIC LD +VIGQ RAK+VLSVAV+NHY R+ +
Sbjct: 52 TKGGLVGKKDGG--VPTPQEICDVLDDYVIGQNRAKRVLSVAVHNHYKRLNH-------- 101
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
G VEL KSNILL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+AG
Sbjct: 102 ---------GTKPGEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEAG 152
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+I+ KLL SDYNV AQ+GIVYIDE+DKI++KAE+ +I+RDVSGEGVQQALL
Sbjct: 153 YVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALL 212
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF +EK I +R + SIGFGA
Sbjct: 213 KLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGAH 272
Query: 491 VRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLT 550
V A + T L+ E DL+ +GLIPEFVGR PV+ +L L LV++L
Sbjct: 273 VAA-------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVAALVKILV 325
Query: 551 EPKNALGKQYRKMFQMN 567
EPKNAL KQY K+F M
Sbjct: 326 EPKNALVKQYAKLFDME 342
>gi|229521843|ref|ZP_04411260.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae TM 11079-80]
gi|417825142|ref|ZP_12471730.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE48]
gi|419830396|ref|ZP_14353881.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-1A2]
gi|419834075|ref|ZP_14357530.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-61A2]
gi|419837651|ref|ZP_14361089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-46B1]
gi|421343856|ref|ZP_15794259.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-43B1]
gi|422917777|ref|ZP_16952095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-02A1]
gi|423735603|ref|ZP_17708800.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-41B1]
gi|423822682|ref|ZP_17716692.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55C2]
gi|423856423|ref|ZP_17720499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-59A1]
gi|423882949|ref|ZP_17724086.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-60A1]
gi|423998207|ref|ZP_17741459.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-02C1]
gi|424009943|ref|ZP_17752880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-44C1]
gi|424017100|ref|ZP_17756929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55B2]
gi|424020025|ref|ZP_17759811.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-59B1]
gi|424625393|ref|ZP_18063854.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-50A1]
gi|424629879|ref|ZP_18068166.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-51A1]
gi|424633922|ref|ZP_18072022.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-52A1]
gi|424637004|ref|ZP_18075012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55A1]
gi|424640913|ref|ZP_18078796.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-56A1]
gi|424648981|ref|ZP_18086644.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-57A1]
gi|443527900|ref|ZP_21093949.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-78A1]
gi|229340768|gb|EEO05773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae TM 11079-80]
gi|340046627|gb|EGR07557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE48]
gi|341636659|gb|EGS61353.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-02A1]
gi|395939936|gb|EJH50617.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-43B1]
gi|408012535|gb|EKG50312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-50A1]
gi|408018227|gb|EKG55686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-52A1]
gi|408023466|gb|EKG60629.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-56A1]
gi|408024054|gb|EKG61190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55A1]
gi|408032930|gb|EKG69499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-57A1]
gi|408055232|gb|EKG90171.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-51A1]
gi|408620169|gb|EKK93181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-1A2]
gi|408629786|gb|EKL02455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-41B1]
gi|408634658|gb|EKL06893.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55C2]
gi|408640711|gb|EKL12497.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-59A1]
gi|408641073|gb|EKL12854.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-60A1]
gi|408648897|gb|EKL20214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-61A2]
gi|408852562|gb|EKL92384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-02C1]
gi|408856199|gb|EKL95894.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-46B1]
gi|408860003|gb|EKL99657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55B2]
gi|408863738|gb|EKM03212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-44C1]
gi|408867119|gb|EKM06481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-59B1]
gi|443453772|gb|ELT17590.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-78A1]
Length = 426
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 223/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ ++
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK------DNS 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|429083885|ref|ZP_19146911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
condimenti 1330]
gi|426547239|emb|CCJ72952.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
condimenti 1330]
Length = 424
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 223/305 (73%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVQAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I+ R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+ +
Sbjct: 281 ATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|162451420|ref|YP_001613787.1| ATP-dependent protease ATP-binding subunit ClpX [Sorangium
cellulosum So ce56]
gi|161162002|emb|CAN93307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sorangium
cellulosum So ce56]
Length = 418
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/320 (52%), Positives = 230/320 (71%), Gaps = 31/320 (9%)
Query: 251 SKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSA 310
KD + GS P P +I LD++V+GQ RAKK+L+VAV+NHY RI + S
Sbjct: 53 EKDEPYAGST---PVPKPADIKATLDEYVVGQNRAKKILAVAVHNHYKRIDSRVSS---- 105
Query: 311 GESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAG 370
D VEL KSNILL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AG
Sbjct: 106 -------------DDVELSKSNILLLGPTGSGKTLLAQTLAKIINVPFAIADATTLTEAG 152
Query: 371 YVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 430
YVGEDVE+I+ +LL +D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 153 YVGEDVENIIVQLLQNADHDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 212
Query: 431 KMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAP 490
K++EGT+ NVP KG RKHP+ D +Q+DT +ILFICGGAFV +++ I R +++GFGA
Sbjct: 213 KIIEGTIANVPPKGGRKHPQQDFLQVDTTNILFICGGAFVGLDQIIQRRIGQNTLGFGAD 272
Query: 491 VRA--NMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
++A + + G L+ V+ DL+ +GLIPEF+GR PV+ +L L E L+ +
Sbjct: 273 IKAKKDFKLG---------DLLSVVQPEDLLKFGLIPEFIGRLPVVATLHELNEEALIDI 323
Query: 549 LTEPKNALGKQYRKMFQMNG 568
LT+PKN+L KQY+K+F+M+G
Sbjct: 324 LTKPKNSLVKQYQKLFEMDG 343
>gi|365841794|ref|ZP_09382848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Flavonifractor plautii ATCC 29863]
gi|373115370|ref|ZP_09529544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Lachnospiraceae bacterium 7_1_58FAA]
gi|364576946|gb|EHM54241.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Flavonifractor plautii ATCC 29863]
gi|371670436|gb|EHO35517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Lachnospiraceae bacterium 7_1_58FAA]
Length = 438
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/312 (54%), Positives = 225/312 (72%), Gaps = 25/312 (8%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
G ++ + PTP+EI LD+++IGQE AK LSVAVYNHY RIY GE
Sbjct: 54 QAGPDIPDVIPTPREIRDVLDQYIIGQEDAKIALSVAVYNHYKRIYF------GGGED-- 105
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
VEL+KSNILLMGPTG GKTL A+TLAR + VPF IADATTLT+AGYVG+D
Sbjct: 106 ----------VELQKSNILLMGPTGCGKTLFAQTLARILKVPFAIADATTLTEAGYVGDD 155
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VE+IL +L+ +DY++ A++GI+Y+DE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEG
Sbjct: 156 VENILLRLVQAADYDIELAERGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEG 215
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
TV NVP +G RKHP + IQI+TK+ILFICGGAF +EK I +R +IGFGA +++
Sbjct: 216 TVANVPPQGGRKHPHQEFIQINTKNILFICGGAFDGMEKIIEQRLNKKTIGFGADIQSKK 275
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
T+S+++ V+ DL+ +G+IPE VGR PV+ +L AL + QLV++LTEPKNA
Sbjct: 276 ERD-------TTSVLKQVQPHDLLKFGIIPELVGRLPVITTLNALDKGQLVRILTEPKNA 328
Query: 556 LGKQYRKMFQMN 567
L KQY+K+ + +
Sbjct: 329 LVKQYQKLLEYD 340
>gi|411119404|ref|ZP_11391784.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Oscillatoriales cyanobacterium JSC-12]
gi|410711267|gb|EKQ68774.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Oscillatoriales cyanobacterium JSC-12]
Length = 447
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 224/306 (73%), Gaps = 17/306 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI K LD VIGQ+ AKK+LSVAVYNHY KR + + T
Sbjct: 78 NQIPKPREIKKYLDDHVIGQDDAKKILSVAVYNHY---------KRLSFLEAKGTGKVAP 128
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD VEL+KSNILL+GPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 129 DDVVELQKSNILLIGPTGCGKTLLAQTLAEILDVPFAVADATTLTEAGYVGEDVENILLR 188
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 189 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 248
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG-GVT 501
+G RKHP D IQIDT +ILFICGGAFV ++K I +R SIGF ++AG +
Sbjct: 249 QGGRKHPYQDCIQIDTSNILFICGGAFVGLDKAIEQRIGKKSIGF-------IQAGDNQS 301
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
T+ +++ +E DL+ +G+IPEF+GR PV+ + L E+ L ++LTEP+NAL KQY+
Sbjct: 302 KEKRTADILKHLEPDDLVKFGMIPEFIGRVPVMAVVDPLDEDALTEILTEPRNALVKQYQ 361
Query: 562 KMFQMN 567
K+ +M+
Sbjct: 362 KLLKMD 367
>gi|390435717|ref|ZP_10224255.1| ATP-dependent protease ATP-binding subunit ClpX [Pantoea
agglomerans IG1]
Length = 423
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I++R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIAQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQCEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|406893189|gb|EKD38317.1| hypothetical protein ACD_75C00776G0001, partial [uncultured
bacterium]
Length = 367
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 220/301 (73%), Gaps = 24/301 (7%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVE 327
P EI K LD +VIGQE AKKVLSVAV+NHY RI VDDD+VE
Sbjct: 12 PMEIKKHLDDYVIGQEYAKKVLSVAVHNHYKRIEAP-----------------VDDDSVE 54
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
L+KSNI+L+GPTGSGKTL+A+TLAR +NVPF +ADATTLT+AGYVGEDVE+IL LL S
Sbjct: 55 LQKSNIILIGPTGSGKTLVAQTLARILNVPFCMADATTLTEAGYVGEDVENILVSLLQAS 114
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
DY+V AQ+GI+YIDE+DKI +K++S +++RDVSGEGVQQALLK++EGT ++P KG RK
Sbjct: 115 DYDVEKAQRGIIYIDEIDKIARKSDSPSLTRDVSGEGVQQALLKIIEGTNASIPPKGGRK 174
Query: 448 HPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTS 507
HP+ + IQ++T +ILFICGGAFV ++ +S R+ SIGFGA V + +
Sbjct: 175 HPQQEMIQMNTTNILFICGGAFVGLDSVVSRRQGAKSIGFGAKVTGDEKKK-------IG 227
Query: 508 SLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
L++ V+ DL+ +GLIPE VGR PV+ ++ L E L+++L EPKNAL KQY+K+F+ +
Sbjct: 228 ELLKAVQPEDLLKFGLIPELVGRLPVIATMEELVEEDLIRILKEPKNALTKQYQKLFEFD 287
Query: 568 G 568
G
Sbjct: 288 G 288
>gi|387881034|ref|YP_006311336.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
Xuzhou21]
gi|386794492|gb|AFJ27526.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
Xuzhou21]
Length = 424
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E TV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEVTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K IS R + S IGFGA V+A +D
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK------SDK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|395791167|ref|ZP_10470625.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
alsatica IBS 382]
gi|395408530|gb|EJF75140.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
alsatica IBS 382]
Length = 424
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/315 (53%), Positives = 227/315 (72%), Gaps = 25/315 (7%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 66 PTPQEIITVLDDYVIGQQYAKRVLSVAVHNHYKRLAHQSKS-----------------ND 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA-------PDERC 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ +E DLI +GLIPEF+GR P++ +L L N LVQ+L++PKNAL KQY+++F+
Sbjct: 282 VGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDINALVQILSQPKNALVKQYQRLFE 341
Query: 566 M-NGQAAFYGKCFEI 579
M N + AF+ I
Sbjct: 342 MENVELAFHEDALRI 356
>gi|222148265|ref|YP_002549222.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
vitis S4]
gi|254763828|sp|B9JVD6.1|CLPX_AGRVS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|221735253|gb|ACM36216.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium vitis
S4]
Length = 425
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 227/304 (74%), Gaps = 28/304 (9%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP++I K LD++VIGQ +AKK+LSVAV+NHY R+ + S G D
Sbjct: 67 PTPQDIIKILDEYVIGQRQAKKILSVAVHNHYKRLSHASK--------------GGD--- 109
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTDA 503
RKHP+ + +Q+DT +ILFICGGAF ++K IS R + +SIGFGA V + + R G V
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVVSPEDRRVGEV--- 286
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
+ +E DL+ +GLIPEF+GR PVL +L L E+ L+Q+L+EPKNAL KQY+++
Sbjct: 287 ------LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRL 340
Query: 564 FQMN 567
F+M
Sbjct: 341 FEME 344
>gi|241760359|ref|ZP_04758454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
flavescens SK114]
gi|241319237|gb|EER55715.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
flavescens SK114]
Length = 421
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 218/308 (70%), Gaps = 23/308 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
N K PTP EI L+ VIGQE AKK L+V+VYNHY R+ + ++ +
Sbjct: 59 ENAEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRHPKAEGK---------- 108
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE
Sbjct: 109 -------VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ 161
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 162 IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP + I +DT +ILFICGGAF +EK I +R + IGFGA V +
Sbjct: 222 SVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENA 281
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+ S+L ETVE DLI +GLIPE +GR PV+ +L L E+ LV +LTEPKNAL K
Sbjct: 282 DI------SALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVK 335
Query: 559 QYRKMFQM 566
QY+ +F M
Sbjct: 336 QYQTLFAM 343
>gi|15641923|ref|NP_231555.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121727847|ref|ZP_01680914.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae V52]
gi|147674941|ref|YP_001217454.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
O395]
gi|153217637|ref|ZP_01951318.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae 1587]
gi|227082051|ref|YP_002810602.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
M66-2]
gi|227118369|ref|YP_002820265.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae O395]
gi|229507983|ref|ZP_04397488.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae BX 330286]
gi|229511780|ref|ZP_04401259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae B33]
gi|229515307|ref|ZP_04404767.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae TMA 21]
gi|229518917|ref|ZP_04408360.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae RC9]
gi|229523941|ref|ZP_04413346.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae bv. albensis VL426]
gi|229529053|ref|ZP_04418443.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae 12129(1)]
gi|229607529|ref|YP_002878177.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
MJ-1236]
gi|254286857|ref|ZP_04961809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae AM-19226]
gi|254849009|ref|ZP_05238359.1| ATP-dependent protease ATP-binding subunit [Vibrio cholerae MO10]
gi|255745320|ref|ZP_05419269.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio cholera
CIRS 101]
gi|261210562|ref|ZP_05924855.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC341]
gi|262156044|ref|ZP_06029164.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae INDRE 91/1]
gi|262167883|ref|ZP_06035583.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae RC27]
gi|297579439|ref|ZP_06941367.1| ATP-dependent protease ATP-binding subunit [Vibrio cholerae RC385]
gi|298498041|ref|ZP_07007848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae MAK 757]
gi|360035804|ref|YP_004937567.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae O1 str. 2010EL-1786]
gi|379741754|ref|YP_005333723.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
IEC224]
gi|384424911|ref|YP_005634269.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae LMA3984-4]
gi|417813966|ref|ZP_12460619.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-49A2]
gi|417817703|ref|ZP_12464332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HCUF01]
gi|417821274|ref|ZP_12467888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE39]
gi|418334941|ref|ZP_12943855.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-06A1]
gi|418338558|ref|ZP_12947452.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-23A1]
gi|418346476|ref|ZP_12951238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-28A1]
gi|418350238|ref|ZP_12954969.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-43A1]
gi|418355772|ref|ZP_12958491.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-61A1]
gi|419826900|ref|ZP_14350399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1033(6)]
gi|421318200|ref|ZP_15768768.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1032(5)]
gi|421321693|ref|ZP_15772246.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1038(11)]
gi|421325492|ref|ZP_15776016.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1041(14)]
gi|421329154|ref|ZP_15779664.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1042(15)]
gi|421336650|ref|ZP_15787111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1048(21)]
gi|421340081|ref|ZP_15790513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-20A2]
gi|421348401|ref|ZP_15798778.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-46A1]
gi|421351662|ref|ZP_15802027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-25]
gi|421354595|ref|ZP_15804927.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-45]
gi|422897028|ref|ZP_16934478.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-40A1]
gi|422903230|ref|ZP_16938206.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-48A1]
gi|422907114|ref|ZP_16941918.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-70A1]
gi|422909691|ref|ZP_16944334.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-09]
gi|422913961|ref|ZP_16948467.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HFU-02]
gi|422923226|ref|ZP_16956384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae BJG-01]
gi|422926167|ref|ZP_16959181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-38A1]
gi|423145486|ref|ZP_17133080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-19A1]
gi|423150162|ref|ZP_17137476.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-21A1]
gi|423153982|ref|ZP_17141163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-22A1]
gi|423157066|ref|ZP_17144159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-32A1]
gi|423160636|ref|ZP_17147576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-33A2]
gi|423165456|ref|ZP_17152185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-48B2]
gi|423731473|ref|ZP_17704776.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-17A1]
gi|423768487|ref|ZP_17712901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-50A2]
gi|423895364|ref|ZP_17727111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-62A1]
gi|423930802|ref|ZP_17731505.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-77A1]
gi|423956435|ref|ZP_17734989.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-40]
gi|423985221|ref|ZP_17738538.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-46]
gi|424002917|ref|ZP_17745992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-17A2]
gi|424006706|ref|ZP_17749676.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-37A1]
gi|424024687|ref|ZP_17764338.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-62B1]
gi|424027572|ref|ZP_17767175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-69A1]
gi|424586844|ref|ZP_18026423.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1030(3)]
gi|424591587|ref|ZP_18031014.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1037(10)]
gi|424595491|ref|ZP_18034812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1040(13)]
gi|424599407|ref|ZP_18038588.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
Cholerae CP1044(17)]
gi|424602128|ref|ZP_18041270.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1047(20)]
gi|424607099|ref|ZP_18046043.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1050(23)]
gi|424610922|ref|ZP_18049761.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-39A1]
gi|424613735|ref|ZP_18052523.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-41A1]
gi|424617715|ref|ZP_18056387.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-42A1]
gi|424622494|ref|ZP_18061002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-47A1]
gi|424645458|ref|ZP_18083194.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-56A2]
gi|424653227|ref|ZP_18090607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-57A2]
gi|424657048|ref|ZP_18094333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-81A2]
gi|424659630|ref|ZP_18096879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-16]
gi|429887949|ref|ZP_19369453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae PS15]
gi|440710124|ref|ZP_20890775.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae 4260B]
gi|443504284|ref|ZP_21071242.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-64A1]
gi|443508182|ref|ZP_21074945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-65A1]
gi|443512024|ref|ZP_21078662.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-67A1]
gi|443515582|ref|ZP_21082093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-68A1]
gi|443519376|ref|ZP_21085772.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-71A1]
gi|443524266|ref|ZP_21090479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-72A2]
gi|443531863|ref|ZP_21097877.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-7A1]
gi|443535660|ref|ZP_21101538.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-80A1]
gi|443539207|ref|ZP_21105061.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-81A1]
gi|449055649|ref|ZP_21734317.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae O1 str. Inaba G4222]
gi|21263486|sp|Q9KQS7.1|CLPX_VIBCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|172047650|sp|A5F6Z1.1|CLPX_VIBC3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763872|sp|C3LNM5.1|CLPX_VIBCM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9656457|gb|AAF95069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121629883|gb|EAX62297.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae V52]
gi|124113416|gb|EAY32236.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae 1587]
gi|146316824|gb|ABQ21363.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae O395]
gi|150423007|gb|EDN14956.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae AM-19226]
gi|227009939|gb|ACP06151.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae M66-2]
gi|227013819|gb|ACP10029.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae O395]
gi|229332827|gb|EEN98313.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae 12129(1)]
gi|229337522|gb|EEO02539.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae bv. albensis VL426]
gi|229343606|gb|EEO08581.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae RC9]
gi|229348012|gb|EEO12971.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae TMA 21]
gi|229351745|gb|EEO16686.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae B33]
gi|229355488|gb|EEO20409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae BX 330286]
gi|229370184|gb|ACQ60607.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae MJ-1236]
gi|254844714|gb|EET23128.1| ATP-dependent protease ATP-binding subunit [Vibrio cholerae MO10]
gi|255737150|gb|EET92546.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio cholera
CIRS 101]
gi|260840347|gb|EEX66918.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC341]
gi|262023610|gb|EEY42311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae RC27]
gi|262030222|gb|EEY48866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae INDRE 91/1]
gi|297537033|gb|EFH75866.1| ATP-dependent protease ATP-binding subunit [Vibrio cholerae RC385]
gi|297542374|gb|EFH78424.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae MAK 757]
gi|327484464|gb|AEA78871.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae LMA3984-4]
gi|340036452|gb|EGQ97428.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-49A2]
gi|340037426|gb|EGQ98401.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HCUF01]
gi|340038905|gb|EGQ99879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE39]
gi|341621321|gb|EGS47067.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-70A1]
gi|341621464|gb|EGS47209.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-48A1]
gi|341622389|gb|EGS48052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-40A1]
gi|341634451|gb|EGS59209.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-09]
gi|341637622|gb|EGS62300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HFU-02]
gi|341644318|gb|EGS68543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae BJG-01]
gi|341646373|gb|EGS70487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-38A1]
gi|356417650|gb|EHH71265.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-06A1]
gi|356418522|gb|EHH72119.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-21A1]
gi|356423096|gb|EHH76557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-19A1]
gi|356428542|gb|EHH81768.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-22A1]
gi|356430200|gb|EHH83409.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-23A1]
gi|356433555|gb|EHH86744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-28A1]
gi|356439723|gb|EHH92688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-32A1]
gi|356444734|gb|EHH97543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-43A1]
gi|356445733|gb|EHH98535.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-33A2]
gi|356450977|gb|EHI03682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-48B2]
gi|356452270|gb|EHI04949.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-61A1]
gi|356646958|gb|AET27013.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae O1 str. 2010EL-1786]
gi|378795264|gb|AFC58735.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
IEC224]
gi|395916458|gb|EJH27288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1032(5)]
gi|395917330|gb|EJH28158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1041(14)]
gi|395918687|gb|EJH29511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1038(11)]
gi|395927688|gb|EJH38451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1042(15)]
gi|395931749|gb|EJH42493.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1048(21)]
gi|395939364|gb|EJH50046.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-20A2]
gi|395942980|gb|EJH53656.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-46A1]
gi|395952107|gb|EJH62721.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-25]
gi|395953720|gb|EJH64333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-45]
gi|395958921|gb|EJH69376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-56A2]
gi|395959526|gb|EJH69954.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-57A2]
gi|395962172|gb|EJH72473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-42A1]
gi|395970883|gb|EJH80600.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-47A1]
gi|395973486|gb|EJH83045.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1030(3)]
gi|395975869|gb|EJH85343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1047(20)]
gi|408007244|gb|EKG45337.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-39A1]
gi|408013144|gb|EKG50889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-41A1]
gi|408031462|gb|EKG68084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1037(10)]
gi|408032384|gb|EKG68970.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1040(13)]
gi|408041790|gb|EKG77884.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
Cholerae CP1044(17)]
gi|408043274|gb|EKG79280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1050(23)]
gi|408051986|gb|EKG87052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-16]
gi|408053606|gb|EKG88611.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-81A2]
gi|408607690|gb|EKK81093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1033(6)]
gi|408624095|gb|EKK97047.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-17A1]
gi|408633768|gb|EKL06069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-50A2]
gi|408654234|gb|EKL25376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-77A1]
gi|408655164|gb|EKL26289.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-62A1]
gi|408657608|gb|EKL28686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-40]
gi|408664452|gb|EKL35289.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-46]
gi|408845314|gb|EKL85430.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-37A1]
gi|408846087|gb|EKL86199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-17A2]
gi|408870421|gb|EKM09701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-62B1]
gi|408878875|gb|EKM17868.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-69A1]
gi|429224948|gb|EKY31246.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae PS15]
gi|439974347|gb|ELP50524.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae 4260B]
gi|443431229|gb|ELS73781.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-64A1]
gi|443435124|gb|ELS81268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-65A1]
gi|443439007|gb|ELS88722.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-67A1]
gi|443442992|gb|ELS96294.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-68A1]
gi|443446794|gb|ELT03450.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-71A1]
gi|443449600|gb|ELT09891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-72A2]
gi|443457253|gb|ELT24650.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-7A1]
gi|443461200|gb|ELT32273.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-80A1]
gi|443465307|gb|ELT39967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-81A1]
gi|448264688|gb|EMB01925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae O1 str. Inaba G4222]
Length = 426
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 223/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ ++
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK------DNS 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|319637747|ref|ZP_07992513.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
mucosa C102]
gi|317400902|gb|EFV81557.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
mucosa C102]
Length = 421
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/308 (54%), Positives = 219/308 (71%), Gaps = 23/308 (7%)
Query: 259 SNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTT 318
N K PTP EI L+ VIGQE AKK L+V+VYNHY R+ + ++ +
Sbjct: 59 ENAEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRHPKAEGK---------- 108
Query: 319 DGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVES 378
VEL KSNILL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE
Sbjct: 109 -------VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ 161
Query: 379 ILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVV 438
I+ KLL D++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV
Sbjct: 162 IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 439 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAG 498
+VP +G RKHP + I +DT +ILFICGGAF +EK I +R + IGFGA V +
Sbjct: 222 SVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENA 281
Query: 499 GVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGK 558
+ S+L ETVE DLI +GLIPE +GR P++ +L L E+ LV +LTEPKNAL K
Sbjct: 282 DI------SALFETVEPEDLIKFGLIPELIGRLPMIATLAELDEDALVNILTEPKNALVK 335
Query: 559 QYRKMFQM 566
QY+ +F+M
Sbjct: 336 QYQTLFEM 343
>gi|388566135|ref|ZP_10152606.1| ATP-dependent Clp protease ATP-binding subunit [Hydrogenophaga sp.
PBC]
gi|388266641|gb|EIK92160.1| ATP-dependent Clp protease ATP-binding subunit [Hydrogenophaga sp.
PBC]
Length = 421
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 221/307 (71%), Gaps = 22/307 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G++ PTP ++ LD +VIGQ+ AK+ L+VAVYNHY R+ ++ ++
Sbjct: 62 GDELPTPAQLKGNLDNYVIGQDAAKRALAVAVYNHYKRLRHKQGSRK------------- 108
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+T+AR +NVPFV+ADATTLT+AGYVGEDVE+I+
Sbjct: 109 --DEVELAKSNILLIGPTGSGKTLLAQTMARMLNVPFVMADATTLTEAGYVGEDVENIVA 166
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL +Y++ AQQGIVYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 KLLQSCNYDIERAQQGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLVEGTMASVP 226
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP D +Q+DT +ILFICGGAF +EK I R + S IGF A VR+ +
Sbjct: 227 PQGGRKHPNQDFLQVDTTNILFICGGAFAGLEKIIENRTEASGIGFSAAVRSKQQRS--- 283
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ + VE DLI +GLIPE VGR PV+ +L L+E+ LV +LT+P+NA+ KQ+
Sbjct: 284 ----LTEVFREVEPEDLIKFGLIPELVGRVPVIATLAELSEDALVDILTQPRNAVVKQFS 339
Query: 562 KMFQMNG 568
K+ M G
Sbjct: 340 KLLSMEG 346
>gi|240146205|ref|ZP_04744806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseburia
intestinalis L1-82]
gi|257201661|gb|EEU99945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseburia
intestinalis L1-82]
gi|291536690|emb|CBL09802.1| endopeptidase Clp ATP-binding regulatory subunit (clpX) [Roseburia
intestinalis M50/1]
gi|291537974|emb|CBL11085.1| endopeptidase Clp ATP-binding regulatory subunit (clpX) [Roseburia
intestinalis XB6B4]
Length = 423
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/308 (57%), Positives = 227/308 (73%), Gaps = 25/308 (8%)
Query: 268 PKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVE 327
P+E+ LD +VIGQ++AKKVLSVAVYNHY RI AG DD VE
Sbjct: 70 PEELKAFLDDYVIGQDQAKKVLSVAVYNHYKRIM--------AG----------DDLGVE 111
Query: 328 LEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVS 387
L+KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K++ +
Sbjct: 112 LQKSNILMLGPTGSGKTLLAQTLARVLNVPFAIADATTLTEAGYVGEDVENILLKIIQAA 171
Query: 388 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 447
DYN+ AQ+GI+YIDE+DKI+KK+E+++I+RDVSGEGVQQALLK+LEGTV +VP +G RK
Sbjct: 172 DYNIERAQRGIIYIDEIDKISKKSENVSITRDVSGEGVQQALLKILEGTVASVPPQGGRK 231
Query: 448 HPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTS 507
HP+ + IQIDT +ILFICGGAF +EK I R +IGF A +R + R + D V+
Sbjct: 232 HPQQELIQIDTTNILFICGGAFDGLEKIIETRMDQKTIGFNADIR-DKRDYNIGD-VLKH 289
Query: 508 SLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L D + +GLIPEF+GR PV VSL L + L+++L EPKNAL KQY+K+F+++
Sbjct: 290 AL-----PQDFVKFGLIPEFIGRVPVTVSLDMLDRDALIRILQEPKNALTKQYQKLFELD 344
Query: 568 GQAAFYGK 575
G A + K
Sbjct: 345 GVALDFDK 352
>gi|359437262|ref|ZP_09227332.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20311]
gi|359446706|ref|ZP_09236357.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20439]
gi|358028086|dbj|GAA63581.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20311]
gi|358039512|dbj|GAA72606.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20439]
Length = 427
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/312 (55%), Positives = 226/312 (72%), Gaps = 30/312 (9%)
Query: 260 NLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTD 319
+ +K P PKEI LD +VIGQ+ AKKVLSVAVYNHY R+ N+S+++
Sbjct: 62 DAADKLPVPKEIRNHLDDYVIGQDHAKKVLSVAVYNHYKRLRNQSTKQ------------ 109
Query: 320 GVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESI 379
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 110 -----DVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENI 164
Query: 380 LYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVN 439
+ KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +
Sbjct: 165 IQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 224
Query: 440 VPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAG 498
VP +G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFG V+
Sbjct: 225 VPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSHKNTGIGFGVNVK------ 278
Query: 499 GVTDAVVTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
++ + SL ET VE DL+ YGLIPEF+GR PV+ +L L E LVQ+L+EPKNA
Sbjct: 279 ---ESAASRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALVQILSEPKNA 335
Query: 556 LGKQYRKMFQMN 567
+ KQ+ +F M
Sbjct: 336 ITKQFSVLFGME 347
>gi|427404658|ref|ZP_18895398.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Massilia
timonae CCUG 45783]
gi|425716829|gb|EKU79798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Massilia
timonae CCUG 45783]
Length = 422
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 217/304 (71%), Gaps = 24/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI + LD++VIGQ+ AK++LSVAVYNHY R+ + + D
Sbjct: 65 LPTPHEITELLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK-----------------D 107
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+Y V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP D +QIDT +I+FICGGAF + K I R S IGFGA V++ D
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKVIQNRSVKSGIGFGATVKSQ------NDDY 281
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
L+E E DLI +GLIPE VGR PV+ +L LTE L+Q+L EPKNAL KQY K+
Sbjct: 282 NAEILLEA-EPEDLIKFGLIPELVGRLPVVAALSELTEEALIQILVEPKNALIKQYSKLL 340
Query: 565 QMNG 568
+M G
Sbjct: 341 EMEG 344
>gi|422307872|ref|ZP_16395026.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1035(8)]
gi|408618824|gb|EKK91882.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1035(8)]
Length = 426
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 223/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP++I + LD +VIGQE AKKVL+VAVYNHY R+ N G+++S +
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN--------GDTTS--------E 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+VA A++GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + IGFGA VR+ ++
Sbjct: 229 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK------DNS 282
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
S L VE DL+ YGLIPEF+GR PV +L L E L+Q+L EPKNAL KQY +
Sbjct: 283 KTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAAL 342
Query: 564 FQMN 567
F++
Sbjct: 343 FELE 346
>gi|357633384|ref|ZP_09131262.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
sp. FW1012B]
gi|386392768|ref|ZP_10077549.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio sp. U5L]
gi|357581938|gb|EHJ47271.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
sp. FW1012B]
gi|385733646|gb|EIG53844.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio sp. U5L]
Length = 417
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 226/306 (73%), Gaps = 22/306 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G K P EI + LD++VIGQE+AKK+L+VAV+NHY R+Y AG + G
Sbjct: 58 GGKLLPPAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVY-------YAGAA------GA 104
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
DD VE++KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL
Sbjct: 105 DD--VEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILV 162
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
+LL +DY++ AA +GI+YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 163 QLLQNADYDIEAASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIP 222
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
KG RKHP+ + I+++T +ILFI GGAF+ +EK + R + +++GFGA V A
Sbjct: 223 PKGGRKHPQQEFIRLNTANILFIVGGAFIGLEKIVGHRMRGTAMGFGAKVEARHDDD--- 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S ++ +DLI +GLIPEF+GR P+L SL LT LV++LTEPKNAL KQY+
Sbjct: 280 ----MSRMLSLAHPADLIKFGLIPEFIGRIPILTSLEELTREDLVRILTEPKNALTKQYQ 335
Query: 562 KMFQMN 567
K+F+++
Sbjct: 336 KLFELD 341
>gi|390571700|ref|ZP_10251937.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
terrae BS001]
gi|420250358|ref|ZP_14753577.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. BT03]
gi|389936314|gb|EIM98205.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
terrae BS001]
gi|398061217|gb|EJL53015.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. BT03]
Length = 423
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/333 (53%), Positives = 232/333 (69%), Gaps = 35/333 (10%)
Query: 236 NLVRGGGSGSGFGSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYN 295
++R +G+G +G S+L P+P+EI LD++VIGQERAKK+L+VAVYN
Sbjct: 46 EIIRDEAAGAGLETG-----LSKSDL----PSPQEIRDILDQYVIGQERAKKILAVAVYN 96
Query: 296 HYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVN 355
HY R+ + + D +EL KSNILL+GPTGSGKTLLA+TLAR +N
Sbjct: 97 HYKRLKHLDKK-----------------DDIELSKSNILLIGPTGSGKTLLAQTLARLLN 139
Query: 356 VPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLN 415
VPFVIADATTLT+AGYVGEDVE+I+ KLL +Y V AQ+GIVYIDE+DKI++K+++ +
Sbjct: 140 VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPS 199
Query: 416 ISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 475
I+RDVSGEGVQQALLK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF +EK
Sbjct: 200 ITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKV 259
Query: 476 ISERRQDSSIGFGAPVRANM-RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVL 534
I +R + + IGFGA V++ R G ++ VE DLI +GLIPE +GR PV+
Sbjct: 260 IVDRTEKTGIGFGASVKSKQDRDAG--------EVLREVEPEDLIKFGLIPELIGRLPVV 311
Query: 535 VSLLALTENQLVQVLTEPKNALGKQYRKMFQMN 567
+L L E L+++L EPKNAL KQY K+F M
Sbjct: 312 ATLGKLDEVALMKILVEPKNALIKQYHKLFNME 344
>gi|320540338|ref|ZP_08039990.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Serratia symbiotica str. Tucson]
gi|320029658|gb|EFW11685.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Serratia symbiotica str. Tucson]
Length = 423
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/307 (55%), Positives = 222/307 (72%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + LD +VIGQE+AKKVL+VAVYNHY R+ N +
Sbjct: 62 SELPTPHEIRQHLDDYVIGQEQAKKVLAVAVYNHYKRLRNSDAS---------------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+ VEL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -NGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DYN AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP
Sbjct: 165 LLRKCDYNAQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R S IGFGA V+ G +
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGSGIGFGATVK------GES 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
+ L+ E DLI +GLIPEF+GR PV+ +L L+E+ L+Q+L EPKNAL KQY+
Sbjct: 279 EKATEGELLLQAEPEDLINFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQ 338
Query: 562 KMFQMNG 568
+F + G
Sbjct: 339 ALFNLEG 345
>gi|312880129|ref|ZP_07739929.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aminomonas
paucivorans DSM 12260]
gi|310783420|gb|EFQ23818.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aminomonas
paucivorans DSM 12260]
Length = 428
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 221/305 (72%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
K P P+EI LD++VIGQE+AKKVLSVAVYNHY RI S DG
Sbjct: 71 KLPKPEEIKAFLDQYVIGQEQAKKVLSVAVYNHYQRI--------------SSPQDG--- 113
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSN+LL+GPTG GKTLLA++LA+ + VPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 114 DEVELPKSNVLLVGPTGCGKTLLAQSLAKLLKVPFAIADATTLTEAGYVGEDVENILVRL 173
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L +DY+ A++GI+YIDE+DKI++K+ES +I+RDVSGEGVQQALL++LEGT+ NVP K
Sbjct: 174 LQAADYDPKTAERGIIYIDEIDKISRKSESPSITRDVSGEGVQQALLRILEGTLSNVPPK 233
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQ+DT++ILFICGGAF +E I+ R + IGFG + + DA
Sbjct: 234 GGRKHPNQDFIQMDTRNILFICGGAFDGLEPIIARRTRRKVIGFGGELSSGQ------DA 287
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++L ++ DL++YG IPEFVGR PV+V L +L EN L ++L EPKNAL +QY+K+
Sbjct: 288 EERNALFRAIQPEDLMSYGFIPEFVGRLPVVVPLDSLDENALTRILREPKNALLRQYQKV 347
Query: 564 FQMNG 568
F + G
Sbjct: 348 FSLEG 352
>gi|222528716|ref|YP_002572598.1| ATP-dependent protease ATP-binding subunit ClpX
[Caldicellulosiruptor bescii DSM 6725]
gi|254763830|sp|B9MQ33.1|CLPX_ANATD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|222455563|gb|ACM59825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor bescii DSM 6725]
Length = 433
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/305 (53%), Positives = 226/305 (74%), Gaps = 23/305 (7%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI + LD++V+GQ+ AKK+LSVAVYNHY RIY +++K
Sbjct: 60 RLPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHNTKK---------------- 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNIL++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 104 DDVELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
+ +DY++ A++GI+YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct: 164 IQNADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP + IQIDT +ILFICGGAF IEK I +R + ++GF A + +
Sbjct: 224 GGRKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKK-------E 276
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
++ + DL+ +G+IPEF+GR P++V+L AL + L+++LTEPKNAL KQY+K+
Sbjct: 277 KKIGDILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKL 336
Query: 564 FQMNG 568
F M+G
Sbjct: 337 FAMDG 341
>gi|377809581|ref|YP_005004802.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pediococcus
claussenii ATCC BAA-344]
gi|361056322|gb|AEV95126.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
claussenii ATCC BAA-344]
Length = 419
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 218/305 (71%), Gaps = 22/305 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N PTP +I + L+++VIGQE AKK LSVAVYNHY RI Q+ D
Sbjct: 62 NDVPTPNDIVEHLNQYVIGQEEAKKTLSVAVYNHYKRINQMEVQE--------------D 107
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D EL+KSNI L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL K
Sbjct: 108 EDAPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL +DYNV A++GI+YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT NVP
Sbjct: 168 LLQNADYNVEQAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTTANVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + IQIDT +ILFI GGAF IE + R D +IGFG+ + +
Sbjct: 228 QGGRKHPQQEFIQIDTTNILFIVGGAFDGIETIVKNRLGDKTIGFGSNSKTQLDE----- 282
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
+SLM+ V DL+ +GLIPEF+GR P+L +L LT LV++LTEPKNAL KQY
Sbjct: 283 ---EASLMQQVVPEDLLKFGLIPEFIGRLPILTALEKLTTEDLVRILTEPKNALVKQYEA 339
Query: 563 MFQMN 567
+ +++
Sbjct: 340 LMKLD 344
>gi|372276433|ref|ZP_09512469.1| ATP-dependent protease ATP-binding subunit ClpX [Pantoea sp.
SL1_M5]
Length = 423
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQERAKKVL+VAVYNHY R+ N G++S +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRN--------GDTS---------N 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I++R + S IGFGA V+ G +
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIAQRVETGSGIGFGATVK------GKSQK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKM 563
L+ E DLI +GLIPEF+GR PV+ +L L+E L+Q+L EPKNAL KQY+ +
Sbjct: 281 ASEGELLAQCEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQAL 340
Query: 564 FQMNG 568
F + G
Sbjct: 341 FNLEG 345
>gi|357389555|ref|YP_004904394.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Kitasatospora
setae KM-6054]
gi|311896030|dbj|BAJ28438.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX
[Kitasatospora setae KM-6054]
Length = 428
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 219/306 (71%), Gaps = 17/306 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P+EI + LD++V+GQ+ AKK LSVAVYNHY R+ Q AG S S
Sbjct: 59 EELPKPREIYEFLDQYVVGQDLAKKALSVAVYNHYKRV-----QAGEAGRSGSGR----- 108
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
DD +EL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+IL K
Sbjct: 109 DDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDVENILLK 168
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
L+ +DY+V A+ GI+YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP
Sbjct: 169 LIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPP 228
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQIDT ++LFI GGAF +E+ I R IGFGA +R+
Sbjct: 229 QGGRKHPHQEFIQIDTTNVLFIVGGAFAGLERIIEGRAGAKGIGFGATIRSKRE------ 282
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRK 562
V ++ V DL+ +G+IPEF+GR PV+ S+ L L+Q+LTEPKNAL KQYRK
Sbjct: 283 -VDSADHFRQVMPEDLVKFGMIPEFIGRLPVITSVHNLDREALLQILTEPKNALVKQYRK 341
Query: 563 MFQMNG 568
+F+++G
Sbjct: 342 LFELDG 347
>gi|402834015|ref|ZP_10882622.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. CM52]
gi|402279084|gb|EJU28127.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. CM52]
Length = 425
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 223/304 (73%), Gaps = 23/304 (7%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P PKEI + LD++VIGQ+ AKK LSVAVYNHY RI R+ G++ D
Sbjct: 61 VPKPKEIRQILDQYVIGQDEAKKSLSVAVYNHYKRI------NRTQGKA----------D 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL+KSNIL++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 EVELQKSNILMIGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DY+V A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTV +VP +G
Sbjct: 165 QAADYDVEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 224
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQIDT +ILF+CGGAF IEK I R ++GFGA + + +
Sbjct: 225 GRKHPHQELIQIDTTNILFLCGGAFDGIEKIIEARLGKKNMGFGAEIESKVERN------ 278
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMF 564
+ + DL+ GLIPEF+GR P++V+L AL E+ LV++LTEPKNAL KQY+K+
Sbjct: 279 -IGETLRHILPEDLLKNGLIPEFIGRLPIVVTLEALGEDTLVRILTEPKNALVKQYQKLL 337
Query: 565 QMNG 568
+M+G
Sbjct: 338 EMDG 341
>gi|409202136|ref|ZP_11230339.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
flavipulchra JG1]
Length = 427
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/307 (55%), Positives = 221/307 (71%), Gaps = 24/307 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K P PKEI LD +VIGQ+ AKKVLSVAVYNHY R+ N+ +
Sbjct: 65 DKLPVPKEIRNHLDDYVIGQDHAKKVLSVAVYNHYKRLRNQGGKG--------------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 --DVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERR-QDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K I +R +++ IGFGA V++ +
Sbjct: 228 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSTKNTGIGFGAEVKSKDSERSL- 286
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYR 561
S + VE DL+ YGLIPEF+GR PV+ +L L E L+++L EPKNAL KQY
Sbjct: 287 -----SETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALIEILNEPKNALTKQYA 341
Query: 562 KMFQMNG 568
+F+M G
Sbjct: 342 ALFKMEG 348
>gi|189024263|ref|YP_001935031.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella abortus
S19]
gi|260546575|ref|ZP_05822314.1| ATP-dependent protease ATP-binding subunit [Brucella abortus NCTC
8038]
gi|238689370|sp|B2S5W0.1|CLPX_BRUA1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189019835|gb|ACD72557.1| ATP-dependent protease ATP-binding subunit [Brucella abortus S19]
gi|260095625|gb|EEW79502.1| ATP-dependent protease ATP-binding subunit [Brucella abortus NCTC
8038]
Length = 424
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/309 (55%), Positives = 227/309 (73%), Gaps = 25/309 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
PTP+EI LD +VIGQ+ AK+VLSVAV+NHY R+ ++S +
Sbjct: 66 PTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQSK-----------------NSD 108
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
+EL KSNILL+GPTG GKT LA+TLAR ++VPF++ADATTLTQAGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTQAGYVGEDVENIILKLLQ 168
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +++ IS R + +SIGFGA V++ D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS-------VDERR 281
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNALGKQYRKMFQ 565
+ + +E DL+ +GLIPEFVGR PV+ +L L + LVQ+LTEPKNAL KQY+++F
Sbjct: 282 IGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLFD 341
Query: 566 M-NGQAAFY 573
M N + F+
Sbjct: 342 MENVELVFH 350
>gi|399060627|ref|ZP_10745702.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Novosphingobium sp. AP12]
gi|398037345|gb|EJL30539.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Novosphingobium sp. AP12]
Length = 420
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 224/319 (70%), Gaps = 33/319 (10%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
+G KDG + +P+EIC+ L+ +VIGQERAK+VLSVAV+NHY R+ + Q
Sbjct: 57 AGRKDG---------EVVSPREICETLNDYVIGQERAKRVLSVAVHNHYKRLKHSGKQ-- 105
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
VEL KSNILL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+
Sbjct: 106 ---------------GDVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTE 150
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+I+ KLL SDYNV AQQGIVYIDE+DKI++KAE+ +I+RDVSGEGVQQA
Sbjct: 151 AGYVGEDVENIILKLLQSSDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQA 210
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF ++K I++R Q SIGFG
Sbjct: 211 LLKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFG 270
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQV 548
A V D L++ E DL+ +GLIPEFVGR PV+ +L L LV++
Sbjct: 271 AHV-------ADPDKRRVGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKI 323
Query: 549 LTEPKNALGKQYRKMFQMN 567
L EPKNAL KQY ++F++
Sbjct: 324 LKEPKNALIKQYARLFELE 342
>gi|326432268|gb|EGD77838.1| ATP-dependent protease ATP-binding subunit [Salpingoeca sp. ATCC
50818]
Length = 603
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/311 (56%), Positives = 221/311 (71%), Gaps = 23/311 (7%)
Query: 256 WGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSS 315
WG S P PKEI L+ +VIGQ+ AKK L+VAVYNHY R+ S+ + A SSS
Sbjct: 220 WGPST-----PKPKEILDNLNDYVIGQDHAKKTLAVAVYNHYKRV---SANLKEA--SSS 269
Query: 316 CTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGED 375
D V+ EKSNILL GPTGSGKTLLA+TLA +NVPF I+D TTLTQAGYVGED
Sbjct: 270 AAHD------VQFEKSNILLAGPTGSGKTLLARTLANILNVPFAISDCTTLTQAGYVGED 323
Query: 376 VESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 435
VES+LY+LL D+++ AQ+GIV++DE+DKI+ + S +RDVSGEGVQQALLK+LEG
Sbjct: 324 VESVLYRLLQACDFDLDRAQRGIVFLDEIDKISSISGSGVATRDVSGEGVQQALLKLLEG 383
Query: 436 TVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANM 495
TVVNVPEKG RK PRG+ IQIDT +ILFI GAF +E I +R + SIGF A ++
Sbjct: 384 TVVNVPEKGGRKSPRGETIQIDTSNILFIASGAFNGLEDLIKKREEKGSIGFNAALKTPN 443
Query: 496 RAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQVLTEPKNA 555
+ V ++ V++ DL+ +GLIPEFVGRFP +V L ALTE+ LV+VLTEPKN+
Sbjct: 444 KP-------VDGQMLRKVQADDLVKFGLIPEFVGRFPCVVHLEALTESDLVRVLTEPKNS 496
Query: 556 LGKQYRKMFQM 566
L QYR +F+M
Sbjct: 497 LVSQYRALFRM 507
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,943,774,795
Number of Sequences: 23463169
Number of extensions: 396522160
Number of successful extensions: 1983272
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6819
Number of HSP's successfully gapped in prelim test: 14583
Number of HSP's that attempted gapping in prelim test: 1946877
Number of HSP's gapped (non-prelim): 32805
length of query: 581
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 433
effective length of database: 8,886,646,355
effective search space: 3847917871715
effective search space used: 3847917871715
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)