Query 008015
Match_columns 581
No_of_seqs 490 out of 2809
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 16:03:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008015.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008015hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 3.4E-44 1.2E-48 371.7 13.5 256 297-573 22-301 (307)
2 3kdj_B Protein phosphatase 2C 100.0 6.2E-44 2.1E-48 371.3 13.8 263 300-578 10-313 (316)
3 2iq1_A Protein phosphatase 2C 100.0 1.1E-43 3.7E-48 362.0 14.1 247 299-576 8-268 (274)
4 3qn1_B Protein phosphatase 2C 100.0 7.9E-44 2.7E-48 373.8 12.1 262 301-578 16-336 (337)
5 4da1_A Protein phosphatase 1K, 100.0 2.6E-43 8.9E-48 376.7 15.6 246 300-576 123-382 (389)
6 2i0o_A Ser/Thr phosphatase; be 100.0 3.5E-43 1.2E-47 363.6 15.1 246 297-570 21-304 (304)
7 1a6q_A Phosphatase 2C; catalyt 100.0 5.4E-43 1.8E-47 373.1 13.3 258 297-576 20-298 (382)
8 2i44_A Serine-threonine phosph 100.0 1.3E-42 4.4E-47 362.2 15.2 257 297-572 20-323 (324)
9 3d8k_A PP2C, protein phosphata 100.0 1.5E-42 5.3E-47 368.8 14.4 256 298-578 12-332 (377)
10 2isn_A NYSGXRC-8828Z, phosphat 100.0 3.6E-41 1.2E-45 356.9 15.5 251 299-574 13-337 (364)
11 2irm_A Mitogen-activated prote 100.0 9.6E-42 3.3E-46 360.8 9.4 240 313-571 28-357 (358)
12 2j4o_A Mitogen-activated prote 100.0 2.1E-41 7.1E-46 363.3 8.0 253 298-573 26-369 (401)
13 2pnq_A [pyruvate dehydrogenase 100.0 5.3E-40 1.8E-44 358.0 13.4 251 312-571 45-456 (467)
14 2pk0_A Serine/threonine protei 100.0 3.4E-37 1.2E-41 308.8 8.5 232 298-571 5-247 (250)
15 1txo_A Putative bacterial enzy 100.0 2.6E-36 9E-41 300.0 10.9 224 297-570 3-236 (237)
16 2j82_A TPPHA, protein serine-t 100.0 1.3E-35 4.5E-40 295.3 12.5 229 300-569 2-240 (240)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 1.8E-34 6.1E-39 286.2 10.2 220 298-569 5-233 (234)
18 3rnr_A Stage II sporulation E 100.0 1.7E-31 5.8E-36 261.8 5.8 193 330-569 8-211 (211)
19 1mzk_A Kinase associated prote 99.9 2E-24 6.9E-29 198.0 12.7 135 175-309 5-139 (139)
20 4h87_A Kanadaptin; FHA domain 99.9 1.9E-22 6.5E-27 182.5 10.6 111 165-287 7-127 (130)
21 1uht_A Expressed protein; FHA 99.8 1E-20 3.6E-25 168.4 10.4 105 173-291 8-113 (118)
22 3gqs_A Adenylate cyclase-like 99.8 1E-20 3.6E-25 165.2 9.7 99 175-288 2-101 (106)
23 3va4_A Mediator of DNA damage 99.8 2.8E-20 9.5E-25 168.7 10.5 113 164-289 12-126 (132)
24 2xt9_B Putative signal transdu 99.8 3.6E-20 1.2E-24 164.2 9.3 96 175-288 9-104 (115)
25 2kb3_A Oxoglutarate dehydrogen 99.8 6.9E-20 2.4E-24 168.3 10.5 96 175-288 44-139 (143)
26 3po8_A RV0020C protein, putati 99.8 7.4E-20 2.5E-24 158.1 9.1 94 175-288 3-96 (100)
27 2jpe_A Nuclear inhibitor of pr 99.8 3.5E-20 1.2E-24 170.0 6.2 102 174-287 31-133 (140)
28 2kfu_A RV1827 PThr 22; FHA dom 99.8 1.6E-19 5.4E-24 169.0 9.2 96 175-288 53-148 (162)
29 1r21_A Antigen KI-67; beta san 99.8 1.7E-19 5.7E-24 162.9 8.8 100 175-291 10-110 (128)
30 3hx1_A SLR1951 protein; P74513 99.8 7.1E-19 2.4E-23 159.3 9.4 102 177-294 10-119 (131)
31 3els_A PRE-mRNA leakage protei 99.8 6.8E-19 2.3E-23 164.2 9.1 97 175-283 29-146 (158)
32 3oun_A Putative uncharacterize 99.8 7.1E-19 2.4E-23 163.2 7.9 92 175-286 65-156 (157)
33 3t91_A Stage II sporulation pr 99.7 4.5E-18 1.6E-22 169.1 12.5 194 315-573 19-223 (242)
34 3elv_A PRE-mRNA leakage protei 99.7 8.5E-18 2.9E-22 161.6 9.1 97 175-283 76-193 (205)
35 1qu5_A Protein kinase SPK1; FH 99.7 5.2E-18 1.8E-22 161.9 6.6 112 164-287 16-145 (182)
36 1lgp_A Cell cycle checkpoint p 99.7 2.3E-17 7.8E-22 146.3 9.6 92 177-282 4-96 (116)
37 1wln_A Afadin; beta sandwich, 99.7 2.8E-17 9.5E-22 146.7 10.0 94 177-287 11-112 (120)
38 2jqj_A DNA damage response pro 99.7 1.9E-17 6.7E-22 153.6 9.3 95 176-288 17-121 (151)
39 1dmz_A Protein (protein kinase 99.7 1.4E-17 4.6E-22 155.7 7.0 101 176-288 4-122 (158)
40 1g3g_A Protien kinase SPK1; FH 99.7 3.1E-17 1.1E-21 154.2 8.7 97 175-282 31-135 (164)
41 3pu9_A Protein serine/threonin 99.7 1.7E-16 5.7E-21 158.3 13.8 192 316-573 23-227 (242)
42 2csw_A Ubiquitin ligase protei 99.7 2.6E-17 8.9E-22 151.7 7.2 92 175-281 15-110 (145)
43 2pie_A E3 ubiquitin-protein li 99.7 1E-16 3.4E-21 146.6 10.3 91 176-281 8-102 (138)
44 1gxc_A CHK2, CDS1, serine/thre 99.6 3.3E-16 1.1E-20 145.0 8.4 91 177-283 30-132 (149)
45 1g6g_A Protein kinase RAD53; b 99.6 7.9E-16 2.7E-20 138.6 10.4 96 177-283 5-108 (127)
46 3f79_A Probable two-component 99.6 6.7E-15 2.3E-19 147.4 12.9 194 320-570 52-253 (255)
47 2ff4_A Probable regulatory pro 99.6 1.6E-15 5.6E-20 161.5 8.3 84 187-287 296-379 (388)
48 4ejq_A Kinesin-like protein KI 99.5 1.5E-14 5E-19 134.5 7.9 94 179-287 40-142 (154)
49 4a0e_A YSCD, type III secretio 99.5 4E-14 1.4E-18 124.9 8.7 95 176-289 3-98 (123)
50 3zt9_A Serine phosphatase; hyd 99.5 9.9E-14 3.4E-18 133.5 12.2 177 316-568 16-193 (193)
51 3fm8_A Kinesin-like protein KI 99.5 5.2E-14 1.8E-18 125.8 9.0 90 177-284 26-118 (124)
52 3huf_A DNA repair and telomere 99.4 3.3E-13 1.1E-17 136.6 7.7 96 178-287 2-110 (325)
53 3uv0_A Mutator 2, isoform B; F 99.2 9.1E-12 3.1E-16 104.9 4.1 76 192-286 15-97 (102)
54 3i6u_A CDS1, serine/threonine- 99.0 3.5E-10 1.2E-14 121.0 8.7 95 176-286 9-115 (419)
55 3kt9_A Aprataxin; FHA domain, 99.0 1.4E-09 4.9E-14 93.2 10.1 92 179-287 6-97 (102)
56 2brf_A Bifunctional polynucleo 98.9 3.8E-09 1.3E-13 91.5 8.2 92 177-286 9-104 (110)
57 3ke6_A Protein RV1364C/MT1410; 98.8 1.4E-07 4.8E-12 100.5 17.8 194 320-573 53-260 (399)
58 1wv3_A Similar to DNA segregat 98.7 9.3E-09 3.2E-13 102.0 5.6 71 203-287 93-167 (238)
59 1ujx_A Polynucleotide kinase 3 98.7 2E-08 6.7E-13 88.1 6.8 93 176-286 15-111 (119)
60 4egx_A Kinesin-like protein KI 98.7 2.6E-08 8.8E-13 94.9 8.1 91 178-284 69-168 (184)
61 1yj5_C 5' polynucleotide kinas 98.7 4.4E-08 1.5E-12 87.9 8.4 93 177-287 9-105 (143)
62 3eq2_A Probable two-component 98.1 8.2E-06 2.8E-10 86.1 11.1 191 321-571 192-393 (394)
63 1p9k_A ORF, hypothetical prote 30.8 29 0.001 27.2 2.7 32 246-286 46-77 (79)
64 2l6w_A Beta-type platelet-deri 31.7 14 0.0005 25.3 0.0 20 10-29 17-36 (39)
65 1wv3_A Similar to DNA segregat 25.6 59 0.002 31.3 4.4 33 203-239 22-54 (238)
66 2k1k_A Ephrin type-A receptor 22.4 84 0.0029 21.3 3.3 12 17-28 25-36 (38)
67 1nkz_B Light-harvesting protei 20.1 1.1E+02 0.0037 21.3 3.5 21 10-30 19-39 (41)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=3.4e-44 Score=371.75 Aligned_cols=256 Identities=27% Similarity=0.369 Sum_probs=201.9
Q ss_pred ccccccccCChhHHhhcCccCCCccceeeccCCC----CCceeeeccCCCcchhhhhhhhhhHHHHHH--Hhhhhhhh--
Q 008015 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLP----GFGLFGICDGHGGSAAAKSASEILPKMVAA--ILSDSLKR-- 368 (581)
Q Consensus 297 ~~~~vg~asd~~~~~rgG~R~~nED~~~~~~~~~----~~~lfgV~DGhGG~~~~~~as~~l~~~l~~--~l~~~~~~-- 368 (581)
..+.+|.+++. |+|+.|||++++....+ +..||+|||||||+.+|++|++.+++.|.+ .+......
T Consensus 22 ~~~~~~~~s~~------G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~ 95 (307)
T 2p8e_A 22 NGLRYGLSSMQ------GWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGS 95 (307)
T ss_dssp TTEEEEEEEEE------ETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-------
T ss_pred CCeeEEEEecC------CCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccc
Confidence 46778888774 88999999998764433 378999999999999999999999998875 22211000
Q ss_pred hhhhccCChhHHHHHHhhhhhhhhhcc--------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeeccc
Q 008015 369 ERLLSQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSED 440 (581)
Q Consensus 369 e~~~~~~~~~~~L~~af~~~~~~i~~~--------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~D 440 (581)
....+...+.++|+++|..+++.+.+. .+|||++++++. +++ +|+|||||||+|++|+|++.+||+|
T Consensus 96 ~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~--~~~---l~vanvGDSRa~l~r~g~~~~lT~D 170 (307)
T 2p8e_A 96 ALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMIS--PKH---IYFINCGDSRAVLYRNGQVCFSTQD 170 (307)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEEC--SSE---EEEEEESSCEEEEEETTEEEEECCC
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEE--CCc---EEEEEccCcEEEEEECCccccCCCC
Confidence 000112345788999999999887642 468888877774 333 6799999999999999999999999
Q ss_pred ccccchhhhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccc------cccCCCCCccceeeecccc-cceeeeccC
Q 008015 441 HRIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQAS-KAFALLASD 512 (581)
Q Consensus 441 H~~~~~~E~~RI~~~gg~i~~~~~Rv~G-l~vtRalGD~~~K~~~------~~vs~eP~I~~~~~i~~~~-~d~lVLaSD 512 (581)
|++.++.|++||.+.|+.+... |++| +.+||||||..+|..+ +.++++|++.. +...+ ++|||||||
T Consensus 171 H~~~~~~E~~rI~~~gg~v~~~--rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~---~~l~~~d~~llL~SD 245 (307)
T 2p8e_A 171 HKPCNPREKERIQNAGGSVMIQ--RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYE---ILRAEEDEFIILACD 245 (307)
T ss_dssp CCTTSHHHHHHHHHTTCCEETT--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEE---EECCTTEEEEEEECH
T ss_pred CCCCCHHHHHHHHHcCCEEEeC--cccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEE---EEcCCCCeEEEEECC
Confidence 9999999999999999887654 8899 8999999999998642 45788998873 33334 459999999
Q ss_pred CcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcc
Q 008015 513 GFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTF 573 (581)
Q Consensus 513 GlwD~ls~~ei~~iv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~~~~~ 573 (581)
||||+++++|+++++.+.... ..+++.+|+.|++.|+.+|+.||||||||++...+
T Consensus 246 Gl~d~ls~~ei~~~v~~~~~~-----~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~ 301 (307)
T 2p8e_A 246 GIWDVMSNEELCEYVKSRLEV-----SDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEG 301 (307)
T ss_dssp HHHTTSCHHHHHHHHHHHHTT-----CCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC----
T ss_pred CcccCCCHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCC
Confidence 999999999999999874322 35789999999999999999999999999998754
No 2
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=6.2e-44 Score=371.28 Aligned_cols=263 Identities=24% Similarity=0.353 Sum_probs=205.2
Q ss_pred cccccCChhHHhhcCccCCCccceeeccCC----------------CCCceeeeccCCCcchhhhhhhhhhHHHHHHHhh
Q 008015 300 GVGVASDPMALRRGAKKLPMEDVCYYHWPL----------------PGFGLFGICDGHGGSAAAKSASEILPKMVAAILS 363 (581)
Q Consensus 300 ~vg~asd~~~~~rgG~R~~nED~~~~~~~~----------------~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~ 363 (581)
.+|++++ +|+|++|||++++...+ .+..+|||||||||+.+|++|++.+++.|.+.+.
T Consensus 10 ~~g~~s~------~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~ 83 (316)
T 3kdj_B 10 LYGFTSI------CGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIA 83 (316)
T ss_dssp CEEEEEE------CTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEe------EeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 4677775 49999999999875332 2478999999999999999999999999988765
Q ss_pred hhhhh--hhhhccCChhHHHHHHhhhhhhhhhcc---cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeec
Q 008015 364 DSLKR--ERLLSQCDASDVLRDAFFQTEASMNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMS 438 (581)
Q Consensus 364 ~~~~~--e~~~~~~~~~~~L~~af~~~~~~i~~~---~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT 438 (581)
..... ........+.++|+++|..+++.+... .+|||++++++..+ + +|+|||||||+|++|+|++++||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~~~~i~~~--~---l~vanvGDSR~yl~r~g~~~~lT 158 (316)
T 3kdj_B 84 KEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPS--H---IFVANCGDSRAVLCRGKTALPLS 158 (316)
T ss_dssp HHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTSCTTCEECEEEEEECSS--E---EEEEEESSCEEEEEETTEEEESC
T ss_pred hhhcccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEECC--E---EEEEEccCCEEEEEECCEecccC
Confidence 43110 000012346788999999999888654 67888888887533 2 67999999999999999999999
Q ss_pred ccccccchhhhhhhhhcCCcCCC-CCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcce
Q 008015 439 EDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWD 516 (581)
Q Consensus 439 ~DH~~~~~~E~~RI~~~gg~i~~-~~~Rv~G-l~vtRalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD 516 (581)
+||++.++.|+.||...|+.+.. ...|+.| +++||+|||..+|. .++++|++... ....+++|||||||||||
T Consensus 159 ~DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~---~~~~~pdv~~~--~~~~~~d~llL~SDGl~d 233 (316)
T 3kdj_B 159 VDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP---SIIPDPEVTAV--KRVKEDDCLILASDGVWD 233 (316)
T ss_dssp CCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTT---TSBCCCEEEEE--ECCTTEEEEEEECHHHHT
T ss_pred CCCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCC---CcCCCCceEEE--EecCCCCEEEEEccCccc
Confidence 99999999999999999987742 2358888 99999999998885 47889988732 224578999999999999
Q ss_pred eccHHHHHHHHHHHhhhhc------------------ccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcceeeeE
Q 008015 517 VISVKKAIQLVVQMREKYS------------------ADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTFRMSCK 578 (581)
Q Consensus 517 ~ls~~ei~~iv~~~~~~~~------------------~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~~~~~~~~~k 578 (581)
+++++|+++++.+...... .....+++.+|+.|++.|+.+|+.||||||||++...++.+.|
T Consensus 234 ~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~~~~~~~~~ 313 (316)
T 3kdj_B 234 VMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLKSK 313 (316)
T ss_dssp SSCHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECSCC------
T ss_pred CCCHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCcccCC
Confidence 9999999999976321000 0002468899999999999999999999999999998887765
No 3
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=362.05 Aligned_cols=247 Identities=27% Similarity=0.384 Sum_probs=201.4
Q ss_pred ccccccCChhHHhhcCccCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChh
Q 008015 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDAS 378 (581)
Q Consensus 299 ~~vg~asd~~~~~rgG~R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~ 378 (581)
+.+|++++. |+|+.|||++++....++..+|+|||||||+.+|++|++.+++.+.+.+.. ..++.
T Consensus 8 ~~~g~~s~~------G~R~~nED~~~~~~~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~---------~~~~~ 72 (274)
T 2iq1_A 8 ENVGCASQI------GKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK---------EKNLE 72 (274)
T ss_dssp GGCEEEEEC------CSSSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT---------CCCHH
T ss_pred CeEEEEecc------cCCCCccceEEEeeCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc---------cccHH
Confidence 457777774 779999999987643456889999999999999999999999988776542 34577
Q ss_pred HHHHHHhhhhhhhhhcc----------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhh
Q 008015 379 DVLRDAFFQTEASMNHH----------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSE 448 (581)
Q Consensus 379 ~~L~~af~~~~~~i~~~----------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E 448 (581)
++|+++|..+++.+... .+|||++++++.. +.+ ++++||||||+|++++|++.+||+||++..+.|
T Consensus 73 ~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~-~~~---l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E 148 (274)
T 2iq1_A 73 TLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRD-GIE---LVVASVGDSRAILCRKGKPMKLTIDHTPERKDE 148 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEET-TTE---EEEEEESSCEEEEEETTEEEECCCCCCTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEEC-CCE---EEEEEecCceEEEEeCCEeeECCCCCCCcCHHH
Confidence 89999999999887532 4688888777652 222 679999999999999999999999999999999
Q ss_pred hhhhhhcCCcCCC---CCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHH
Q 008015 449 RLRIQETGEPLKD---GETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAI 524 (581)
Q Consensus 449 ~~RI~~~gg~i~~---~~~Rv~G-l~vtRalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~ 524 (581)
+.||+++||.+.. +..|+.| +++||+|||..+|..+ ++++|++.. +.+....++|||||||||||+++++|+.
T Consensus 149 ~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~--v~~~pdi~~-~~l~~g~d~~lll~SDGl~d~l~~~ei~ 225 (274)
T 2iq1_A 149 KERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--VIAEPETKR-IKLHHADDSFLVLTTDGINFMVNSQEIC 225 (274)
T ss_dssp HHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTT--CBCCCEEEE-EECCTTTEEEEEEECHHHHTTCCHHHHH
T ss_pred HHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCC--EEeCCEEEE-EEeCCCCCcEEEEEccCcccCCCHHHHH
Confidence 9999998888753 2347777 8999999999998653 778998873 2222213469999999999999999999
Q ss_pred HHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcceee
Q 008015 525 QLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTFRMS 576 (581)
Q Consensus 525 ~iv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~~~~~~~~ 576 (581)
+++.+ ..+++++|+.|++.|+.+|+.||+|||||+|....+.+
T Consensus 226 ~~~~~---------~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~~~~~ 268 (274)
T 2iq1_A 226 DFVNQ---------CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKEG 268 (274)
T ss_dssp HHHHT---------SSSHHHHHHHHHHHHHHTTCCSCEEEEEEECTTC----
T ss_pred HHHHH---------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCCCC
Confidence 99976 46789999999999999999999999999998776543
No 4
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=7.9e-44 Score=373.77 Aligned_cols=262 Identities=25% Similarity=0.342 Sum_probs=203.7
Q ss_pred ccccCChhHHhhcCccCCCccceeeccCCC---------------------CCceeeeccCCCcchhhhhhhhhhHHHHH
Q 008015 301 VGVASDPMALRRGAKKLPMEDVCYYHWPLP---------------------GFGLFGICDGHGGSAAAKSASEILPKMVA 359 (581)
Q Consensus 301 vg~asd~~~~~rgG~R~~nED~~~~~~~~~---------------------~~~lfgV~DGhGG~~~~~~as~~l~~~l~ 359 (581)
+|.++. +|+|.+|||++++..++. +..||||||||||+.+|++|++.+++.|.
T Consensus 16 ~G~~s~------~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~ 89 (337)
T 3qn1_B 16 WGTVSI------QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALA 89 (337)
T ss_dssp EEEEEE------CTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHH
T ss_pred eEEEEe------eeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHH
Confidence 577765 499999999998753311 36799999999999999999999999998
Q ss_pred HHhhhhhhhh-----hhhccCChhHHHHHHhhhhhhhhhcc-------------------cccccEEEEEEEecCCcchh
Q 008015 360 AILSDSLKRE-----RLLSQCDASDVLRDAFFQTEASMNHH-------------------YEGCTATVLLVWADGNANIF 415 (581)
Q Consensus 360 ~~l~~~~~~e-----~~~~~~~~~~~L~~af~~~~~~i~~~-------------------~~GsTatv~li~~~~~~~~~ 415 (581)
+.+....... .......+.++|+++|..++..+... .+|||++++++.. ++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~--~~--- 164 (337)
T 3qn1_B 90 EEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCS--SH--- 164 (337)
T ss_dssp HHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECS--SE---
T ss_pred HHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEEC--CE---
Confidence 8765432110 00112346789999999999887642 3688888877743 32
Q ss_pred hcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCC-CCeeeec-chhhhhhhhhhhhccccccCCCCCc
Q 008015 416 AQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQDARFSAEPYI 493 (581)
Q Consensus 416 l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~-~~~Rv~G-l~vtRalGD~~~K~~~~~vs~eP~I 493 (581)
+|+|||||||+|++|+|++++||+||++.++.|+.||.+.|+.+.. ...|++| +++||+|||..+|.. ++++|++
T Consensus 165 l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~---v~~~pdv 241 (337)
T 3qn1_B 165 IVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY---VIPEPEV 241 (337)
T ss_dssp EEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT---SBCCCEE
T ss_pred EEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCC---CCCcceE
Confidence 6799999999999999999999999999999999999999988742 2358888 999999999988854 7889988
Q ss_pred cceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhh---c-c--------cccchHHHHHHHHhhhhhhccccCC
Q 008015 494 SPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKY---S-A--------DKENSTEKIANVLLSEARTLRTKDN 561 (581)
Q Consensus 494 ~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~iv~~~~~~~---~-~--------~~~~~~~~~A~~Lv~~A~~~gs~DN 561 (581)
... .....++|||||||||||+++++|+++++....... . . ....+++.+|+.|++.|+.+|+.||
T Consensus 242 ~~~--~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DN 319 (337)
T 3qn1_B 242 TFM--PRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDN 319 (337)
T ss_dssp EEE--ECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSC
T ss_pred EEE--EeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCC
Confidence 731 222468999999999999999999999997632110 0 0 0024678999999999999999999
Q ss_pred ceEEEEecCCcceeeeE
Q 008015 562 TSIIFLDFDSTFRMSCK 578 (581)
Q Consensus 562 iTvIVV~~~~~~~~~~k 578 (581)
||||||+|...++.+.|
T Consensus 320 iTvivv~l~~~~~~~~~ 336 (337)
T 3qn1_B 320 ISIIVIDLKAQRKFKTR 336 (337)
T ss_dssp EEEEEEECCSCC-----
T ss_pred EEEEEEEecCCcccccC
Confidence 99999999998887665
No 5
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=2.6e-43 Score=376.71 Aligned_cols=246 Identities=27% Similarity=0.384 Sum_probs=204.6
Q ss_pred cccccCChhHHhhcCccCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhH
Q 008015 300 GVGVASDPMALRRGAKKLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASD 379 (581)
Q Consensus 300 ~vg~asd~~~~~rgG~R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~ 379 (581)
.+|++++. |+|+.|||++++....++..+|+|||||||+.+|++|++.+++.+.+.+.. ...+.+
T Consensus 123 ~~g~~s~~------G~R~~NED~~~~~~~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~---------~~~~~~ 187 (389)
T 4da1_A 123 NVGCASQI------GKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK---------EKNLET 187 (389)
T ss_dssp GCEEEEEC------TTSSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT---------CCCHHH
T ss_pred eEEEecCC------CCCCCCcceeeeeecCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhcc---------ccCHHH
Confidence 46777764 789999999987544466889999999999999999999999999876643 345778
Q ss_pred HHHHHhhhhhhhhhcc----------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhh
Q 008015 380 VLRDAFFQTEASMNHH----------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSER 449 (581)
Q Consensus 380 ~L~~af~~~~~~i~~~----------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~ 449 (581)
+|+++|..+++.+... .+|||++++++... .+ +++|||||||+|++|+|++++||+||++.++.|+
T Consensus 188 ~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~-~~---l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~ 263 (389)
T 4da1_A 188 LLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDG-IE---LVVASVGDSRAILCRKGKPMKLTIDHTPERKDEK 263 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETT-TE---EEEEEESSCEEEEEETTEEEECCCCCCTTSHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcC-Ce---EEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHH
Confidence 9999999999887532 36888888877532 22 6799999999999999999999999999999999
Q ss_pred hhhhhcCCcCCC---CCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHHH
Q 008015 450 LRIQETGEPLKD---GETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQ 525 (581)
Q Consensus 450 ~RI~~~gg~i~~---~~~Rv~G-l~vtRalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~ 525 (581)
+||.+.||.+.. +..|+.| +++||+|||..+|..+ ++++|++.. +.+....++|||||||||||+|+++++++
T Consensus 264 ~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~--v~~~pdi~~-~~l~~~~dd~llL~SDGL~d~l~~~ei~~ 340 (389)
T 4da1_A 264 ERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--VIAEPETKR-IKLHHADDSFLVLTTDGINFMVNSQEICD 340 (389)
T ss_dssp HHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGT--CBCCCEEEE-EECCSSSCEEEEEECHHHHTTCCHHHHHH
T ss_pred HHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCC--CCCCCceEE-EEEcCCCCcEEEEEeCCcccCCCHHHHHH
Confidence 999999987753 2357788 9999999999999764 788998873 23433347899999999999999999999
Q ss_pred HHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcceee
Q 008015 526 LVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTFRMS 576 (581)
Q Consensus 526 iv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~~~~~~~~ 576 (581)
++.+ ..+++++|+.|++.|+.+|+.||+|||||+|..+++.+
T Consensus 341 il~~---------~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~~ 382 (389)
T 4da1_A 341 FVNQ---------CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKYK 382 (389)
T ss_dssp HHHH---------SSSHHHHHHHHHHHHHHHTCCSCEEEEEEEECCC----
T ss_pred HHHh---------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCCCC
Confidence 9976 46799999999999999999999999999999887654
No 6
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=3.5e-43 Score=363.62 Aligned_cols=246 Identities=30% Similarity=0.475 Sum_probs=195.6
Q ss_pred ccccccccCChhHHhhcCccCCCccceeeccCC-CCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccC
Q 008015 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPL-PGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 375 (581)
Q Consensus 297 ~~~~vg~asd~~~~~rgG~R~~nED~~~~~~~~-~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~ 375 (581)
..+.+|++++. |+|+.|||++++.... ++..+|+|||||||+.+|++|++.+++.|.+... +...
T Consensus 21 ~~~~~~~~s~~------G~R~~nED~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~--------~~~~ 86 (304)
T 2i0o_A 21 EFLASGSSSMQ------GWRISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEA--------YGRK 86 (304)
T ss_dssp SSEEEEEEEEE------ESSSCCCEEEEEEEEEETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHH--------HHTT
T ss_pred CceEEEEeecC------CCCCCccCEEEEEeccCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhh--------cccc
Confidence 36778888874 8899999999765432 4578999999999999999999999998876431 1134
Q ss_pred ChhHHHHHHhhhhhhhhhc----------------------ccccccEEEEEEEecCCcchhhcccccCCceeEEeecCc
Q 008015 376 DASDVLRDAFFQTEASMNH----------------------HYEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGK 433 (581)
Q Consensus 376 ~~~~~L~~af~~~~~~i~~----------------------~~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~ 433 (581)
++.++|+++|..+++.+.. ..+|||++++++. +++ +++|||||||+|++++|+
T Consensus 87 ~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~---l~vanvGDSRa~l~r~g~ 161 (304)
T 2i0o_A 87 EFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLH--GKD---LYVANAGDSRCVVCRNGK 161 (304)
T ss_dssp CHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEE--TTE---EEEEEESSCEEEEEETTE
T ss_pred cHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEE--CCE---EEEEEccCcEEEEEECCE
Confidence 6788999999999987653 2468888877774 333 679999999999999999
Q ss_pred eeeecccccccchhhhhhhhhcCCcCC-CCCeeeec-chhhhhhhhhhhhcc------ccccCCCCCccceeeeccccc-
Q 008015 434 QIKMSEDHRIASYSERLRIQETGEPLK-DGETRLCG-LNLARMLGDKFLKQQ------DARFSAEPYISPVVHIDQASK- 504 (581)
Q Consensus 434 ~~~LT~DH~~~~~~E~~RI~~~gg~i~-~~~~Rv~G-l~vtRalGD~~~K~~------~~~vs~eP~I~~~~~i~~~~~- 504 (581)
+++||+||++.++.|++||.+.|+.+. .+ |++| +++||+|||..+|.. .+.|+++|++.. +...++
T Consensus 162 ~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~--rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~---~~l~~~D 236 (304)
T 2i0o_A 162 ALEMSFDHKPEDTVEYQRIEKAGGRVTLDG--RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEK---ITVGPED 236 (304)
T ss_dssp EEECCCCCCTTSHHHHHHHHHTTCCBCTTS--CBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEE---EECCTTE
T ss_pred EEEcCCCcCCcCHHHHHHHHhCCCEEEeCC--eEcCceeccccccCHHHccCccCCccCCeEEeeCeEEE---EEcCCCC
Confidence 999999999999999999999999886 44 8888 899999999998864 235688998873 333344
Q ss_pred ceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhh------ccccCCceEEEEecC
Q 008015 505 AFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEART------LRTKDNTSIIFLDFD 570 (581)
Q Consensus 505 d~lVLaSDGlwD~ls~~ei~~iv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~------~gs~DNiTvIVV~~~ 570 (581)
.|||||||||||+|+++|+++++.+..... ..+++.+|+.|++.|+. .++.||||||||+|+
T Consensus 237 ~fllL~SDGl~d~l~~~ei~~~v~~~~~~~----~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 237 EFMVLACDGIWNFMTSEQVVQFVQERINKP----GMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp EEEEEECHHHHTTCCHHHHHHHHHHHHTST----TCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred eEEEEECcCccccCCHHHHHHHHHHHHhhc----CCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 478999999999999999999998753210 25789999999999986 458999999999874
No 7
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=5.4e-43 Score=373.09 Aligned_cols=258 Identities=26% Similarity=0.365 Sum_probs=207.7
Q ss_pred ccccccccCChhHHhhcCccCCCccceeeccCCC----CCceeeeccCCCcchhhhhhhhhhHHHHHHH--hhhhhhhhh
Q 008015 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLP----GFGLFGICDGHGGSAAAKSASEILPKMVAAI--LSDSLKRER 370 (581)
Q Consensus 297 ~~~~vg~asd~~~~~rgG~R~~nED~~~~~~~~~----~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~--l~~~~~~e~ 370 (581)
..+.+|.+++. |+|..|||++++....+ +..||+|||||||+.+|++|++.+++.|.+. +.....
T Consensus 20 ~~l~~g~~s~~------G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~--- 90 (382)
T 1a6q_A 20 NGLRYGLSSMQ------GWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAG--- 90 (382)
T ss_dssp TTEEEEEEEEE------ETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSS---
T ss_pred CceEEEEEecC------CCCCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCC---
Confidence 46777887764 88999999998764433 3689999999999999999999999988642 211000
Q ss_pred hhccCChhHHHHHHhhhhhhhhhcc--------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeeccccc
Q 008015 371 LLSQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHR 442 (581)
Q Consensus 371 ~~~~~~~~~~L~~af~~~~~~i~~~--------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~ 442 (581)
..+...+.++|+++|..+++.+... .+|||++++++. +++ +|+|||||||+|++|+|++.+||+||+
T Consensus 91 ~~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~--~~~---l~vanvGDSRayl~r~g~~~~LT~DHs 165 (382)
T 1a6q_A 91 APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLIS--PQH---TYFINCGDSRGLLCRNRKVHFFTQDHK 165 (382)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEEC--SSE---EEEEEESSCEEEEEETTEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEE--CCe---EEEEEcCCCeEEEEECCceEEeCCCCC
Confidence 0012345788999999999887642 478888877774 332 679999999999999999999999999
Q ss_pred ccchhhhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccc------cccCCCCCccceeeecccccceeeeccCCcc
Q 008015 443 IASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQASKAFALLASDGFW 515 (581)
Q Consensus 443 ~~~~~E~~RI~~~gg~i~~~~~Rv~G-l~vtRalGD~~~K~~~------~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlw 515 (581)
+.++.|++||..+|+.+... |++| +++||||||+.+|..+ +.|+++|++.. +.+....++||||||||||
T Consensus 166 ~~~~~E~~RI~~~gg~v~~~--Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~-~~l~~~~dd~llLaSDGlw 242 (382)
T 1a6q_A 166 PSNPLEKERIQNAGGSVMIQ--RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHD-IERSEEDDQFIILACDGIW 242 (382)
T ss_dssp TTSHHHHHHHHHTTCCEETT--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEE-EECCTTTEEEEEEECHHHH
T ss_pred CCCHHHHHHHHhcCcEEecc--cccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEE-EEccCCCCeEEEEeccCcc
Confidence 99999999999999988754 8999 8999999999998653 45788998872 2222124689999999999
Q ss_pred eeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcceee
Q 008015 516 DVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTFRMS 576 (581)
Q Consensus 516 D~ls~~ei~~iv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~~~~~~~~ 576 (581)
|+++++|+++++...... ..+++.+|+.|++.|+.+|+.||||||||+|...++.+
T Consensus 243 d~ls~~ei~~~v~~~~~~-----~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~~ 298 (382)
T 1a6q_A 243 DVMGNEELCDFVRSRLEV-----TDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVS 298 (382)
T ss_dssp TTSCHHHHHHHHHHHHTT-----CCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSCCCC
T ss_pred CCCChHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHhcCCcCCEEEEEEEecCCCCCC
Confidence 999999999999874321 35789999999999999999999999999999887643
No 8
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-42 Score=362.18 Aligned_cols=257 Identities=18% Similarity=0.294 Sum_probs=199.6
Q ss_pred ccccccccCChhHHhhcCccCCCccceeeccC----CCCCceeeeccCCCcchhhhhhhhhhHHHHHHH--hhhhhhh--
Q 008015 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWP----LPGFGLFGICDGHGGSAAAKSASEILPKMVAAI--LSDSLKR-- 368 (581)
Q Consensus 297 ~~~~vg~asd~~~~~rgG~R~~nED~~~~~~~----~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~--l~~~~~~-- 368 (581)
+.+.+|++++. |+|+.|||++++... ..+..||+|||||||+.+|++|++.+++.|.+. +.+....
T Consensus 20 ~~~~~~~~s~~------G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~ 93 (324)
T 2i44_A 20 PAFDAAIFTDI------GGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLR 93 (324)
T ss_dssp TTEEEEEEEEC------TTSSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred cceEEEEEECC------CCCCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhh
Confidence 35778888875 779999999987643 234789999999999999999999999998763 3211000
Q ss_pred ------h-hhhccCChhHHHHHHhhhhhhhhhcc-------cccccEEEEEEEecCCcchhhcccccCCceeEEeec---
Q 008015 369 ------E-RLLSQCDASDVLRDAFFQTEASMNHH-------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVD--- 431 (581)
Q Consensus 369 ------e-~~~~~~~~~~~L~~af~~~~~~i~~~-------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~--- 431 (581)
+ ......++.++|+++|..+++.+... ..|||+|++++. +++ +|+|||||||+|++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~--~~~---l~vanvGDSRa~l~r~~~~ 168 (324)
T 2i44_A 94 SDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLA--KGF---VAVGHLGDSRIAMGVETPN 168 (324)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEE--TTE---EEEEEESSCEEEEEEEETT
T ss_pred ccCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEE--CCe---EEEEEccCceEEEEeccCC
Confidence 0 00012345788999999999887542 468888888743 332 6799999999999997
Q ss_pred C-ceeeecccccccchhhhhhhhhcCCcCC------CCCeeeec-chhhhhhhh----hhhhc-------cccccCCCCC
Q 008015 432 G-KQIKMSEDHRIASYSERLRIQETGEPLK------DGETRLCG-LNLARMLGD----KFLKQ-------QDARFSAEPY 492 (581)
Q Consensus 432 g-~~~~LT~DH~~~~~~E~~RI~~~gg~i~------~~~~Rv~G-l~vtRalGD----~~~K~-------~~~~vs~eP~ 492 (581)
| ++++||+||++.++.|++||+++||.+. +...+..| ++++||||| ..+|+ ..+.++++|+
T Consensus 169 g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pd 248 (324)
T 2i44_A 169 GLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPD 248 (324)
T ss_dssp EEEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCE
T ss_pred CceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCE
Confidence 7 8999999999999999999999998772 12335677 999999999 55553 1345788999
Q ss_pred ccceeeecccccc-eeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHH--HHHHHhhhhhhccccCCceEEEEec
Q 008015 493 ISPVVHIDQASKA-FALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEK--IANVLLSEARTLRTKDNTSIIFLDF 569 (581)
Q Consensus 493 I~~~~~i~~~~~d-~lVLaSDGlwD~ls~~ei~~iv~~~~~~~~~~~~~~~~~--~A~~Lv~~A~~~gs~DNiTvIVV~~ 569 (581)
+. .+...++| |||||||||||+|+++|+++++.+.... ..+++. +|+.|++.|+.+++.||||||||+|
T Consensus 249 v~---~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~-----~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~ 320 (324)
T 2i44_A 249 VR---VVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQE-----GRNPAQALVEMTLAEQQSRNQSADNITAMTVFF 320 (324)
T ss_dssp EE---EEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHHHHTTCCCCCEEEEEEEE
T ss_pred EE---EEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHHhcCCCCCCEEEEEEe
Confidence 87 34444565 9999999999999999999999875322 256888 9999999999999999999999999
Q ss_pred CCc
Q 008015 570 DST 572 (581)
Q Consensus 570 ~~~ 572 (581)
...
T Consensus 321 ~~~ 323 (324)
T 2i44_A 321 KKT 323 (324)
T ss_dssp C--
T ss_pred eCC
Confidence 753
No 9
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-42 Score=368.83 Aligned_cols=256 Identities=17% Similarity=0.217 Sum_probs=204.4
Q ss_pred cccccccCChhHHhhcCccCCCccc-----eeecc---CCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhh
Q 008015 298 PFGVGVASDPMALRRGAKKLPMEDV-----CYYHW---PLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRE 369 (581)
Q Consensus 298 ~~~vg~asd~~~~~rgG~R~~nED~-----~~~~~---~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e 369 (581)
.+.+|.+++. |+|+.|||+ +++.. ..++..||||||||||+.+|++|++.+++.|.+..
T Consensus 12 ~~~~~~~s~~------G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~------- 78 (377)
T 3d8k_A 12 RTVCASATSR------NRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR------- 78 (377)
T ss_dssp HHHHHHTTTC------EEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS-------
T ss_pred cEEEEEEEcc------CCCCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc-------
Confidence 4667777774 889988654 44432 13457899999999999999999999999885421
Q ss_pred hhhccCChhHHHHHHhhhhhhhhhcc--cccccEEEEEEEecCC------------------------------------
Q 008015 370 RLLSQCDASDVLRDAFFQTEASMNHH--YEGCTATVLLVWADGN------------------------------------ 411 (581)
Q Consensus 370 ~~~~~~~~~~~L~~af~~~~~~i~~~--~~GsTatv~li~~~~~------------------------------------ 411 (581)
....++|+++|.++++.+... .+|||++++++....+
T Consensus 79 -----~~~~~al~~af~~~d~~l~~~~~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~val 153 (377)
T 3d8k_A 79 -----DVNEEEITRQFERMDGDLRAANLPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAM 153 (377)
T ss_dssp -----SSSHHHHHHHHHHHHHHHHHHTCCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEE
T ss_pred -----ccHHHHHHHHHHHHHHHHHhcccCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceee
Confidence 234688999999999998765 6799999888753210
Q ss_pred ----------cchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCC--CCCeeeec-chhhhhhhhh
Q 008015 412 ----------ANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLK--DGETRLCG-LNLARMLGDK 478 (581)
Q Consensus 412 ----------~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~--~~~~Rv~G-l~vtRalGD~ 478 (581)
+.-.+|+|||||||+|++++|++++||+||++.++.|+.||.++|+.+. ++..|++| |++||||||.
T Consensus 154 i~~~~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~ 233 (377)
T 3d8k_A 154 NFRRDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSF 233 (377)
T ss_dssp CGGGCGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCG
T ss_pred ecccccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecCh
Confidence 0013779999999999999999999999999999999999999998875 56678999 9999999999
Q ss_pred hhhccc------cccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhh
Q 008015 479 FLKQQD------ARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSE 552 (581)
Q Consensus 479 ~~K~~~------~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~iv~~~~~~~~~~~~~~~~~~A~~Lv~~ 552 (581)
.+|... +.++++|++.. +...++|+||||||||||+++++|+++.+..... .. ..+++.+|+.|++.
T Consensus 234 ~~k~~~~~~~~~~~v~~~Pdv~~---~~l~~~D~llL~SDGl~d~ls~~e~v~~v~~~~~---~~-~~~~~~~a~~Lv~~ 306 (377)
T 3d8k_A 234 DFKKGGQGKLQQDLVSAVPDVTT---FFAYPGDDIVAGTAGAFAHFRSHAAIAAAIALYP---VS-PETVLDAAKAMVVN 306 (377)
T ss_dssp GGSCC---CCSSCSSBCCCEEEE---EEECTTCEEEEECGGGGCSCSSHHHHHHHHTTSC---CC-GGGHHHHHHHHHHT
T ss_pred hhhcccccccccCccccCCcEEE---EEcCCCCEEEEEECCcccCCCcHHHHHHHHHHhh---cc-CCCHHHHHHHHHHH
Confidence 998642 46888999873 3444678999999999999999998876543110 00 35789999999999
Q ss_pred hhhccccCCceEEEEecCCcceeeeE
Q 008015 553 ARTLRTKDNTSIIFLDFDSTFRMSCK 578 (581)
Q Consensus 553 A~~~gs~DNiTvIVV~~~~~~~~~~k 578 (581)
|+.+|+.||||||||+|...+..+++
T Consensus 307 A~~~g~~DNiTvivv~~~~~~~~~~~ 332 (377)
T 3d8k_A 307 AKRRKVTKNISTFVRHLPESRTRSQK 332 (377)
T ss_dssp TTTSSCCSCCCEEEEECCSSCCCCCE
T ss_pred HHhcCCCCCEEEEEEEecCCcchhhc
Confidence 99999999999999999988765544
No 10
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-41 Score=356.90 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=197.3
Q ss_pred ccccccCChhHHhhcCccCCCccceeeccC---CCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccC
Q 008015 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWP---LPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 375 (581)
Q Consensus 299 ~~vg~asd~~~~~rgG~R~~nED~~~~~~~---~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~ 375 (581)
+.++.+++ .|+|+.|||++++... .++..||||||||||+.+|++|++.+++.|.+.. .
T Consensus 13 ~~~~~~s~------~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~------------~ 74 (364)
T 2isn_A 13 TTTVAATM------LGRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS------------E 74 (364)
T ss_dssp EEEEEEEE------CTTSSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCS------------S
T ss_pred eEEEEEEc------CCCCCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhh------------c
Confidence 34566665 3889999999987643 2458899999999999999999999988775311 1
Q ss_pred ChhHHHHHHhhhhhhhhhcc-----cccccEEEEEEEecC---------C------------------------------
Q 008015 376 DASDVLRDAFFQTEASMNHH-----YEGCTATVLLVWADG---------N------------------------------ 411 (581)
Q Consensus 376 ~~~~~L~~af~~~~~~i~~~-----~~GsTatv~li~~~~---------~------------------------------ 411 (581)
...+.|+++|..+|+.+... .+|||++++++.... .
T Consensus 75 ~~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~ 154 (364)
T 2isn_A 75 FTFAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELV 154 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----C
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccc
Confidence 23567899999999887542 578998888875200 0
Q ss_pred ----------------cchhhcccccCCceeEEe-ecCceeeecccccccchhhhhhhhhcCCcCCC-CCeeeec-chhh
Q 008015 412 ----------------ANIFAQCANVGDSACVMN-VDGKQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLA 472 (581)
Q Consensus 412 ----------------~~~~l~vaNVGDSRayl~-r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~-~~~Rv~G-l~vt 472 (581)
....+|+|||||||+|++ ++|++++||+||++.++.|+.||+++||.+.. +.+|+.| +++|
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~lt 234 (364)
T 2isn_A 155 GRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALS 234 (364)
T ss_dssp CSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCS
T ss_pred ccccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeE
Confidence 001367999999999999 79999999999999999999999999887753 4568888 8999
Q ss_pred hhhhhhhhhccc------cccCCCCCccceeeecccccceeeeccCCcceecc--HHHHHHHHHHHhhhhcccccchHHH
Q 008015 473 RMLGDKFLKQQD------ARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS--VKKAIQLVVQMREKYSADKENSTEK 544 (581)
Q Consensus 473 RalGD~~~K~~~------~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls--~~ei~~iv~~~~~~~~~~~~~~~~~ 544 (581)
|||||..+|... +.|+++|++.. +...++||||||||||||+++ ++++.+++....... ..+++.
T Consensus 235 RalGd~~~k~~~~l~~~~~~v~~~Pdv~~---~~l~~~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~----~~~~~~ 307 (364)
T 2isn_A 235 RAFGDSDFKMNPNLPPEEQKVIAVPDVRQ---FYALSSDLLLLACDGVYEPSGMDWAYVRDLTVAEMQRS----KGDLEE 307 (364)
T ss_dssp BCEECGGGSCCCSSCGGGSSSBCCCEEEE---EEECTTCEEEEECHHHHCSSSCCHHHHHHHHHHHHHHT----TSCHHH
T ss_pred EEecchhhccccccCcccCceEEEeEEEE---EECCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhc----CCCHHH
Confidence 999999988532 35788999873 334467899999999999976 889988775432211 357899
Q ss_pred HHHHHhhhhhhccccCCceEEEEecCCcce
Q 008015 545 IANVLLSEARTLRTKDNTSIIFLDFDSTFR 574 (581)
Q Consensus 545 ~A~~Lv~~A~~~gs~DNiTvIVV~~~~~~~ 574 (581)
+|+.|++.|+.+++.||||||||+|...+.
T Consensus 308 ~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~ 337 (364)
T 2isn_A 308 VAARVMDYAYDMNSQDNISVMLVAFHNQEV 337 (364)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHhcCCCCCEEEEEEEcCCCCC
Confidence 999999999999999999999999976543
No 11
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=9.6e-42 Score=360.79 Aligned_cols=240 Identities=16% Similarity=0.247 Sum_probs=191.2
Q ss_pred cCccC---CCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHH-HhhhhhhhhhhhccCChhHHHHHHhhhh
Q 008015 313 GAKKL---PMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDSLKRERLLSQCDASDVLRDAFFQT 388 (581)
Q Consensus 313 gG~R~---~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~-~l~~~~~~e~~~~~~~~~~~L~~af~~~ 388 (581)
.|+|. .|||++++....++..||||||||||+.+|++|++.+++.|.+ .+... ....++.++|+++|..+
T Consensus 28 ~G~r~~~~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~------~~~~~~~~~l~~a~~~~ 101 (358)
T 2irm_A 28 DGRRCEGYESRDKKCLCISDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVC------NTDEAVKELIRQSFMSV 101 (358)
T ss_dssp SSCEEECSSCCEEEEEEECSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTC------CSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCceEEEEECCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccc------cchhhHHHHHHHHHHHH
Confidence 36666 5999998754345688999999999999999999999988764 22211 11234678899999998
Q ss_pred hhhhhc-------------------------------------------ccccccEEEEEEEecCCcchhhcccccCCce
Q 008015 389 EASMNH-------------------------------------------HYEGCTATVLLVWADGNANIFAQCANVGDSA 425 (581)
Q Consensus 389 ~~~i~~-------------------------------------------~~~GsTatv~li~~~~~~~~~l~vaNVGDSR 425 (581)
++.+.. ..+|||++++++..+ + +|+|||||||
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~--~---l~vAnvGDSR 176 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRS--H---LYLGNIGNCR 176 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESS--E---EEEEEESSCE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECC--E---EEEEEcccCe
Confidence 887642 147888888888533 2 6799999999
Q ss_pred eEEeec---C--ceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhhhhhhhhhhhc-----------cccccCC
Q 008015 426 CVMNVD---G--KQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLGDKFLKQ-----------QDARFSA 489 (581)
Q Consensus 426 ayl~r~---g--~~~~LT~DH~~~~~~E~~RI~~~gg~i~~~~~Rv~Gl~vtRalGD~~~K~-----------~~~~vs~ 489 (581)
+|++|+ | ++++||+||++.++.|++||.++|+.+... |+.|..+||||||+.+|. ..+.+++
T Consensus 177 a~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~--r~~g~llTRalGd~~~K~~~~~~~~~~~~~~~~v~~ 254 (358)
T 2irm_A 177 ALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNF--EGVPLYSTRCIGNYLGKAGYKDCNFLSSATAEPVIF 254 (358)
T ss_dssp EEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGG--TTCTTCBSBCEECHHHHTTGGGSSSSTTCSSCSSBC
T ss_pred EEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEecc--CcCCEEcccCCcCHHHhccccccccccccCCCCEec
Confidence 999998 8 999999999999999999999999988764 788844999999999884 1235888
Q ss_pred CCCccceeeecccccceeeeccCCcceecc----------HHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhh----
Q 008015 490 EPYISPVVHIDQASKAFALLASDGFWDVIS----------VKKAIQLVVQMREKYSADKENSTEKIANVLLSEART---- 555 (581)
Q Consensus 490 eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls----------~~ei~~iv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~---- 555 (581)
+|++...+.+. ..++|||||||||||+++ ++|+++++.+.... ..+++.+|+.|++.|+.
T Consensus 255 ~Pdi~~~~~l~-~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~-----~~~~~~~a~~Lv~~A~~~~~~ 328 (358)
T 2irm_A 255 EPEIVGGIQIT-PACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQN-----QSTLGGVAQSVVHRIVQAHHD 328 (358)
T ss_dssp CCEEEEEEECC-TTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTT-----CCSHHHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEEEeC-CCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHhhhh
Confidence 99887212333 246689999999999999 99999999875322 35799999999999966
Q ss_pred -----------cc--ccCCceEEEEecCC
Q 008015 556 -----------LR--TKDNTSIIFLDFDS 571 (581)
Q Consensus 556 -----------~g--s~DNiTvIVV~~~~ 571 (581)
+| +.||||||||+|..
T Consensus 329 ~~~~~~~~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 329 TYMQLVEEHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp HHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred hhccccccccccCCCCCCCeEEEEEeCCC
Confidence 46 89999999999864
No 12
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=2.1e-41 Score=363.26 Aligned_cols=253 Identities=20% Similarity=0.282 Sum_probs=192.6
Q ss_pred cccccccCChhHHhhcCccC--------CCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHH-Hhhhhhhh
Q 008015 298 PFGVGVASDPMALRRGAKKL--------PMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDSLKR 368 (581)
Q Consensus 298 ~~~vg~asd~~~~~rgG~R~--------~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~-~l~~~~~~ 368 (581)
.+.+|+++.. |+|+ .|||++++....++..||||||||||+.+|++|++.+++.|.+ .+...
T Consensus 26 ~~~~G~~~~~------G~r~~g~~~~r~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~--- 96 (401)
T 2j4o_A 26 LSGVGSASNR------SYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAE--- 96 (401)
T ss_dssp TEEEEEECCE------EECSSSSCEECCCCCEEEEEEEETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTT---
T ss_pred cCceeEEecc------cccccccccCCCCCCceEEEecCCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcc---
Confidence 4456666654 4444 6999998754345688999999999999999999999887753 11111
Q ss_pred hhhhccCChhHHHHHHhhhhhhhhhc------------------------------------------ccccccEEEEEE
Q 008015 369 ERLLSQCDASDVLRDAFFQTEASMNH------------------------------------------HYEGCTATVLLV 406 (581)
Q Consensus 369 e~~~~~~~~~~~L~~af~~~~~~i~~------------------------------------------~~~GsTatv~li 406 (581)
....++.++|+++|..+++.+.+ ..+|||++++++
T Consensus 97 ---~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li 173 (401)
T 2j4o_A 97 ---HAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVL 173 (401)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEE
T ss_pred ---cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEE
Confidence 01224567888888877665422 146888888887
Q ss_pred EecCCcchhhcccccCCceeEEeecC----ceeeecccccccchhhhhhhhhcCCcCCC-CCeeeec-chhhhhhhhhhh
Q 008015 407 WADGNANIFAQCANVGDSACVMNVDG----KQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFL 480 (581)
Q Consensus 407 ~~~~~~~~~l~vaNVGDSRayl~r~g----~~~~LT~DH~~~~~~E~~RI~~~gg~i~~-~~~Rv~G-l~vtRalGD~~~ 480 (581)
.. ++ +|||||||||+|+++++ ++++||+||++.++.|++||.++|+.+.. ...|++| +++||||||+.+
T Consensus 174 ~~--~~---l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~ 248 (401)
T 2j4o_A 174 LN--NK---LYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKV 248 (401)
T ss_dssp ET--TE---EEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHH
T ss_pred EC--CE---EEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhh
Confidence 53 32 67999999999999988 99999999999999999999999987521 1126677 899999999988
Q ss_pred hcc-----------ccccCCCCCccceeeecccccceeeeccCCcceec--------cHHHHHHHHHHHhhhhcccccch
Q 008015 481 KQQ-----------DARFSAEPYISPVVHIDQASKAFALLASDGFWDVI--------SVKKAIQLVVQMREKYSADKENS 541 (581)
Q Consensus 481 K~~-----------~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~l--------s~~ei~~iv~~~~~~~~~~~~~~ 541 (581)
|.. .+.++++|++...+.+. ..++|||||||||||+| +++|+++++.+.... ..+
T Consensus 249 k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~-~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~-----~~~ 322 (401)
T 2j4o_A 249 KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLD-GVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAK-----QTS 322 (401)
T ss_dssp HHSGGGSTTTTTCSSCSSBCCCEEEEEEECT-TCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-----CSS
T ss_pred cccccccccccccCCCCeeccceEEEeEEeC-CCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhc-----CCC
Confidence 843 24588899987312333 24569999999999999 899999999875432 357
Q ss_pred HHHHHHHHhhhhhh-------ccc--------cCCceEEEEecCCcc
Q 008015 542 TEKIANVLLSEART-------LRT--------KDNTSIIFLDFDSTF 573 (581)
Q Consensus 542 ~~~~A~~Lv~~A~~-------~gs--------~DNiTvIVV~~~~~~ 573 (581)
++.+|+.|++.|+. +|+ .||||||||+|....
T Consensus 323 ~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~~ 369 (401)
T 2j4o_A 323 LDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPL 369 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCCC
T ss_pred HHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCCC
Confidence 89999999999875 554 899999999997643
No 13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=5.3e-40 Score=357.98 Aligned_cols=251 Identities=27% Similarity=0.379 Sum_probs=188.5
Q ss_pred hcCccCCCccceeeccCC-CCCceeeeccCCCcchhhhhhhhhhHHHHHHHh------hhh---hh--------------
Q 008015 312 RGAKKLPMEDVCYYHWPL-PGFGLFGICDGHGGSAAAKSASEILPKMVAAIL------SDS---LK-------------- 367 (581)
Q Consensus 312 rgG~R~~nED~~~~~~~~-~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l------~~~---~~-------------- 367 (581)
.++.|..|||++.+.... .+..||||||||||+.+|++|++.+++.|...+ ... ..
T Consensus 45 ~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~ 124 (467)
T 2pnq_A 45 RLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKH 124 (467)
T ss_dssp EECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEECCC
T ss_pred ccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccccccc
Confidence 368899999999765433 357899999999999999999999999987542 110 00
Q ss_pred ---------------------hhh-hh-----ccCChhHHHHHHhhhhhhhhhc------------------ccccccEE
Q 008015 368 ---------------------RER-LL-----SQCDASDVLRDAFFQTEASMNH------------------HYEGCTAT 402 (581)
Q Consensus 368 ---------------------~e~-~~-----~~~~~~~~L~~af~~~~~~i~~------------------~~~GsTat 402 (581)
++. .. ....+.++|+++|..+|+.+.. ..+|||++
T Consensus 125 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~ 204 (467)
T 2pnq_A 125 PNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATAC 204 (467)
T ss_dssp TTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEE
T ss_pred ccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEE
Confidence 000 00 1126788999999999987753 14799998
Q ss_pred EEEEEecCCcchhhcccccCCceeEEee---cC--ceeeecccccccchhhhhhhhhcCCc------CCCCCeeeec-ch
Q 008015 403 VLLVWADGNANIFAQCANVGDSACVMNV---DG--KQIKMSEDHRIASYSERLRIQETGEP------LKDGETRLCG-LN 470 (581)
Q Consensus 403 v~li~~~~~~~~~l~vaNVGDSRayl~r---~g--~~~~LT~DH~~~~~~E~~RI~~~gg~------i~~~~~Rv~G-l~ 470 (581)
++++.. ++ +|||||||||||+++ +| ++++||.||++.++.|++||.+.|+. +.++ |+.| ++
T Consensus 205 v~li~~--~~---l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~--Rv~G~l~ 277 (467)
T 2pnq_A 205 VAHVDG--VD---LHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQD--RLLGLLM 277 (467)
T ss_dssp EEEEET--TE---EEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSS--SBTTTBS
T ss_pred EEEEEC--CE---EEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecC--ccccccc
Confidence 888853 32 679999999999998 47 79999999999999999999988753 3344 8899 99
Q ss_pred hhhhhhhhhhhcc------------------------------ccccCCCCCccceeeecccccceeeeccCCcceeccH
Q 008015 471 LARMLGDKFLKQQ------------------------------DARFSAEPYISPVVHIDQASKAFALLASDGFWDVISV 520 (581)
Q Consensus 471 vtRalGD~~~K~~------------------------------~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~ 520 (581)
+||||||..+|.. .++++++|+|.. +.+. ..+.|||||||||||+|++
T Consensus 278 vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~-~~l~-~~D~fLVLaSDGLwd~ls~ 355 (467)
T 2pnq_A 278 PFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTY-HRLR-PQDKFLVLATDGLWETMHR 355 (467)
T ss_dssp SSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEE-EECC-TTEEEEEEECHHHHTTSCH
T ss_pred cchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEE-EEcC-CCCeEEEEEecCccccCCh
Confidence 9999999988842 245889999873 2222 2455999999999999999
Q ss_pred HHHHHHHHHHhhhhcc-cc--------------------------cchHHHHHHHHhhhhhhcc----------------
Q 008015 521 KKAIQLVVQMREKYSA-DK--------------------------ENSTEKIANVLLSEARTLR---------------- 557 (581)
Q Consensus 521 ~ei~~iv~~~~~~~~~-~~--------------------------~~~~~~~A~~Lv~~A~~~g---------------- 557 (581)
+|+++++......... .+ ....+.+|..|++.|+..+
T Consensus 356 ~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~ 435 (467)
T 2pnq_A 356 QDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSL 435 (467)
T ss_dssp HHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC------------------
T ss_pred HHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcC
Confidence 9999999886532110 00 0012668999999998765
Q ss_pred -------ccCCceEEEEecCC
Q 008015 558 -------TKDNTSIIFLDFDS 571 (581)
Q Consensus 558 -------s~DNiTvIVV~~~~ 571 (581)
++||||||||.|+.
T Consensus 436 ~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 436 PEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp -------CCSCEEEEEEEECH
T ss_pred CccccccCCCCcEEEEEEeCc
Confidence 48999999999975
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=3.4e-37 Score=308.83 Aligned_cols=232 Identities=17% Similarity=0.193 Sum_probs=179.9
Q ss_pred cccccccCChhHHhhcCc-cCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHH-HHhhhhhhhhhhhccC
Q 008015 298 PFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVA-AILSDSLKRERLLSQC 375 (581)
Q Consensus 298 ~~~vg~asd~~~~~rgG~-R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~-~~l~~~~~~e~~~~~~ 375 (581)
.+.++.+++. |+ |+.|||++++....++..+|+|||||||+.+|++||+.+++.+. +++..... ...
T Consensus 5 ~~~~~~~s~~------G~~r~~neD~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~-----~~~ 73 (250)
T 2pk0_A 5 YMEISLLTDI------GQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFS-----ELS 73 (250)
T ss_dssp CEEEEEEEEC------CTTCSCCCEEEEEEECTTCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCC-----SHH
T ss_pred eEEEEEecCC------CCCCCcCCCceEeccCCCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccC-----Chh
Confidence 4567777774 66 99999999876554568899999999999999999999999998 44432110 022
Q ss_pred ChhHHHHHHhhhhhhhhhcc-------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhh
Q 008015 376 DASDVLRDAFFQTEASMNHH-------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSE 448 (581)
Q Consensus 376 ~~~~~L~~af~~~~~~i~~~-------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E 448 (581)
.+.+.|+++|..+++.+... .+|||++++++. +++ ++++|+||||+|++++|++.+||.||++.++.+
T Consensus 74 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~--~~~---l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~ 148 (250)
T 2pk0_A 74 EIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIV--GDN---IIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELV 148 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEE--TTE---EEEEEESSCEEEEEETTEEEECCCCCBHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEE--CCe---EEEEEeCCCeEEEEcCCcEEEeCCCCCHHHHHH
Confidence 35678999999998887653 257777777764 333 679999999999999999999999999987754
Q ss_pred hhh-hhhcCCcCCCCCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHH
Q 008015 449 RLR-IQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQL 526 (581)
Q Consensus 449 ~~R-I~~~gg~i~~~~~Rv~G-l~vtRalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~i 526 (581)
+.+ |...+.. ...+ +.+||+||+.. ..+|++. .+...++|+||||||||||+++++++.++
T Consensus 149 ~~g~i~~~~~~------~~~~~~~ltralG~~~--------~~~p~~~---~~~l~~gd~lll~SDGl~d~l~~~~i~~~ 211 (250)
T 2pk0_A 149 KAGQLTEEEAA------SHPQKNIITQSIGQAN--------PVEPDLG---VHLLEEGDYLVVNSDGLTNMLSNADIATV 211 (250)
T ss_dssp HTTSSCHHHHH------TCCSCCCBSCCBSCSS--------CCCCEEE---EEECCTTCEEEEECHHHHTTSCHHHHHHH
T ss_pred HcCCCCHHHHH------hCCCcceEEeecCCCC--------CccceEE---EEEcCCCCEEEEECCCCCCCcCHHHHHHH
Confidence 432 2111110 1123 67999999853 3467765 34555789999999999999999999999
Q ss_pred HHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCC
Q 008015 527 VVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDS 571 (581)
Q Consensus 527 v~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~~~ 571 (581)
+.+ ..+++++|+.|++.|+.+++.||+|||||++..
T Consensus 212 ~~~---------~~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~ 247 (250)
T 2pk0_A 212 LTQ---------EKTLDDKNQDLITLANHRGGLDNITVALVYVES 247 (250)
T ss_dssp HTS---------SSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECC
T ss_pred Hhc---------CCCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeC
Confidence 865 457999999999999999999999999999874
No 15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=2.6e-36 Score=300.02 Aligned_cols=224 Identities=22% Similarity=0.258 Sum_probs=172.3
Q ss_pred ccccccccCChhHHhhcCc-cCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccC
Q 008015 297 IPFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 375 (581)
Q Consensus 297 ~~~~vg~asd~~~~~rgG~-R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~ 375 (581)
+.+.++.++++ |+ |+.|||++++ +..+|+|||||||+.+|++||+.+++.+.+.+... ...
T Consensus 3 ~~~~~~~~s~~------G~~r~~nED~~~~-----~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~-------~~~ 64 (237)
T 1txo_A 3 LVLRYAARSDR------GLVRANNEDSVYA-----GARLLALADGMGGHAAGEVASQLVIAALAHLDDDE-------PGG 64 (237)
T ss_dssp CEEEEEEEEEC------CSSCSSCCEEEEE-----CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSC-------CCS
T ss_pred eEEEEEEecCC------CCCCCcCCCcccc-----CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhC-------Cch
Confidence 34567777764 64 9999999876 35799999999999999999999999887654321 124
Q ss_pred ChhHHHHHHhhhhhhhhhcc--------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchh
Q 008015 376 DASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYS 447 (581)
Q Consensus 376 ~~~~~L~~af~~~~~~i~~~--------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~ 447 (581)
++.+.|+++|..++..+... .+|||++++++. +++ ++++|+||||+|++++|++.+||.||++.++.
T Consensus 65 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~--~~~---l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~~ 139 (237)
T 1txo_A 65 DLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFA--GNR---LGLVHIGDSRGYLLRDGELTQITKDDTFVQTL 139 (237)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEE--TTE---EEEEEESSCEEEEEETTEEEECSCCCBHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEE--CCE---EEEEEEccCcEEEEeCCEeEEeCCCCCHHHHH
Confidence 67888999999998887542 357777776663 333 67999999999999999999999999987654
Q ss_pred hhhhhhhcCCcCCC-CCeeeecchhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHH
Q 008015 448 ERLRIQETGEPLKD-GETRLCGLNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQL 526 (581)
Q Consensus 448 E~~RI~~~gg~i~~-~~~Rv~Gl~vtRalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~i 526 (581)
+..+ ..... ...+..+..++|++|+. ..+|++. .+...++|+||||||||||+++++++.++
T Consensus 140 ~~~G-----~i~~~~~~~~~~~~~~tr~lg~~---------~~~p~~~---~~~l~~~d~lvl~SDGl~d~l~~~~i~~~ 202 (237)
T 1txo_A 140 VDEG-----RITPEEAHSHPQRSLIMRALTGH---------EVEPTLT---MREARAGDRYLLCSDGLSDPVSDETILEA 202 (237)
T ss_dssp HHTT-----SSCTTGGGGCTTTTCBCCCBSSS---------CCCCEEE---EEECCTTCEEEEECHHHHTTSCHHHHHHH
T ss_pred HHcC-----CCCHHHHhhCccccceeeccCCC---------CccceEE---EEecCCCCEEEEECCCCCCCCCHHHHHHH
Confidence 3322 11110 00112234578999862 3577775 34455688999999999999999999999
Q ss_pred HHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecC
Q 008015 527 VVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFD 570 (581)
Q Consensus 527 v~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~~ 570 (581)
+.+ .+++++|+.|++.|+.+++.||+||||++|.
T Consensus 203 ~~~----------~~~~~~a~~L~~~a~~~g~~DniTvivv~~~ 236 (237)
T 1txo_A 203 LQI----------PEVAESAHRLIELALRGGGPDNVTVVVADLE 236 (237)
T ss_dssp HTS----------SSHHHHHHHHHHHHHHTTCCSCEEEEEEEEE
T ss_pred Hhc----------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEee
Confidence 843 4789999999999999999999999999985
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=1.3e-35 Score=295.35 Aligned_cols=229 Identities=24% Similarity=0.295 Sum_probs=167.7
Q ss_pred cccccCChhHHhhcCc-cCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChh
Q 008015 300 GVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDAS 378 (581)
Q Consensus 300 ~vg~asd~~~~~rgG~-R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~ 378 (581)
.++.++++ |+ |+.|||++ +.....+. +|+|||||||+.+|++||+.+++.+.+.+...... ....+.
T Consensus 2 ~~~~~s~~------G~~r~~neD~~-~~~~~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~----~~~~~~ 69 (240)
T 2j82_A 2 DVAGLTDC------GLIRKSNQDAF-YIDEKHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLED----LQHDPV 69 (240)
T ss_dssp EEEEEEEC------CSSCSSCCEEE-EECTTTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHH----HTTSHH
T ss_pred eEEEeCCC------CCCCCcCCCcc-EecCCCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccc----cchhHH
Confidence 45666664 66 99999999 65433445 99999999999999999999999998766543210 034577
Q ss_pred HHHHHHhhhhhhhhhcc--------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhh
Q 008015 379 DVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERL 450 (581)
Q Consensus 379 ~~L~~af~~~~~~i~~~--------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~ 450 (581)
+.|.++|..+++.+... .+|||++++++...+++ ++++|+||||+|++++|++.+||.||++.++.++.
T Consensus 70 ~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~---l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~~~~ 146 (240)
T 2j82_A 70 TLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDR---AWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAVQL 146 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSE---EEEEEESSCEEEEEETTEEEECSCCCBHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCE---EEEEEEccCceEEEeCCEEEEECCCCcHHHHHHHc
Confidence 88999999999888653 24777777776422433 67999999999999999999999999998764433
Q ss_pred hhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHHHHH
Q 008015 451 RIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQ 529 (581)
Q Consensus 451 RI~~~gg~i~~~~~Rv~G-l~vtRalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~iv~~ 529 (581)
|........+..+ +.+||+||+.. ..+|++. .+...++|+||||||||||+++++++.+++.
T Consensus 147 -----g~i~~~~~~~~~~~~~ltralG~~~--------~~~p~~~---~~~l~~gd~lll~SDGl~d~l~~~~i~~~l~- 209 (240)
T 2j82_A 147 -----GSLTIEQARQHPWRHVLSQCLGRED--------LSQIDIQ---PIDLEPGDRLLLCSDGLTEELTDDVISIYLS- 209 (240)
T ss_dssp ------------------CCCBSCCBSCTT--------CCCCEEE---EEECCTTCEEEEECHHHHTTSCHHHHHHHHT-
T ss_pred -----CCCCHHHHhcCCCcCeEeecCCCCC--------ceeEEEE---EEeeCCCCEEEEECCCCCCCCCHHHHHHHHc-
Confidence 2222111112233 67999999842 3467765 3455578899999999999999999999885
Q ss_pred HhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEec
Q 008015 530 MREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDF 569 (581)
Q Consensus 530 ~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~ 569 (581)
..+++.+|+.|++.|+.+++.||+||||+++
T Consensus 210 ---------~~~~~~~a~~l~~~a~~~g~~DniTvivv~~ 240 (240)
T 2j82_A 210 ---------EPNVQKAAAALVDAAKTHGGRDNVTVVVISV 240 (240)
T ss_dssp ---------CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred ---------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEeC
Confidence 1468999999999999999999999999975
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=1.8e-34 Score=286.25 Aligned_cols=220 Identities=23% Similarity=0.272 Sum_probs=167.8
Q ss_pred cccccccCChhHHhhcCc-cCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCC
Q 008015 298 PFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCD 376 (581)
Q Consensus 298 ~~~vg~asd~~~~~rgG~-R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~ 376 (581)
.+.++.++++ |+ |+.|||++++ +..+|+|||||||+ |+.||+.+.+.+.+.+... .+
T Consensus 5 ~~~~~~~s~~------G~~r~~neD~~~~-----~~~~~~V~DG~Gg~--G~~as~~~~~~l~~~~~~~---------~~ 62 (234)
T 2jfr_A 5 VLSAATATDQ------GPVRENNQDACLA-----DGILYAVADGFGAR--GHHASATALKTLSAGFAAA---------PD 62 (234)
T ss_dssp EEEEEEEEEC------CSSCSSCCEEEEE-----ETTEEEEEEEESTT--HHHHHHHHHHHHHHHHHHS---------CS
T ss_pred eEEEEEecCC------CCCCCcCCCccee-----CCcEEEEEeCCCcc--HHHHHHHHHHHHHHHHhcC---------Cc
Confidence 3566777764 66 9999999965 56799999999999 7788888888777655432 12
Q ss_pred hhHHHHHHhhhhhhhhhcc------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhh
Q 008015 377 ASDVLRDAFFQTEASMNHH------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERL 450 (581)
Q Consensus 377 ~~~~L~~af~~~~~~i~~~------~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~ 450 (581)
.+.|.++|..+++.+... ..|||++++++..+.+. .++++|+||||+|++++|++.+||+||++.++.++.
T Consensus 63 -~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~--~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~~ 139 (234)
T 2jfr_A 63 -RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQG--GPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRM 139 (234)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGT--SCEEEEESSCCEEEEETTEEEECSCCCBHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCcc--EEEEEEEccCceEEEECCEEEEeCCCCCHHHHHHHc
Confidence 678889999998887653 16888877776432211 156999999999999999999999999997754433
Q ss_pred h-hhhcCCcCCCCCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHHHH
Q 008015 451 R-IQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVV 528 (581)
Q Consensus 451 R-I~~~gg~i~~~~~Rv~G-l~vtRalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~iv~ 528 (581)
+ |...+.. ...+ +.+||+||+.. ..+|++. .+...++|+||||||||||+++++++.+++
T Consensus 140 g~i~~~~~~------~~~~~~~~tralG~~~--------~~~~~~~---~~~l~~gd~lll~SDGl~d~~~~~~i~~~~- 201 (234)
T 2jfr_A 140 GEITRHEAR------WHPQRHLLTRALGIGP--------HIGPDVF---GIDCGPGDRLLISSDGLFAAADEALIVDAA- 201 (234)
T ss_dssp TSSCHHHHT------TCTTTTCBSCCBSSSS--------CCCCEEE---ECCCCTTCEEEEECGGGGTTSCHHHHHHHH-
T ss_pred CCCCHHHHh------cCcccceeeecCcCCC--------CceeEEE---EEecCCCCEEEEECCCCccccCHHHHHHHH-
Confidence 2 2111100 1112 67899999742 3467665 345567899999999999999999999998
Q ss_pred HHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEec
Q 008015 529 QMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDF 569 (581)
Q Consensus 529 ~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVV~~ 569 (581)
+ ..+++.+|+.|++.|+.+++.||+||||+++
T Consensus 202 ~---------~~~~~~~a~~l~~~a~~~g~~DniTvivv~~ 233 (234)
T 2jfr_A 202 T---------SPDPQVAVRRLVEVANDAGGSDNTTVVVIDL 233 (234)
T ss_dssp T---------CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred c---------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEe
Confidence 5 4679999999999999999999999999987
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.97 E-value=1.7e-31 Score=261.79 Aligned_cols=193 Identities=18% Similarity=0.193 Sum_probs=138.0
Q ss_pred CCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhcc--------cccccE
Q 008015 330 PGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH--------YEGCTA 401 (581)
Q Consensus 330 ~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~~~~i~~~--------~~GsTa 401 (581)
++..+|+|||||||+.+|++||+.+++.+.+.+.... .+ .+++..+++.+... .+|||+
T Consensus 8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~---------~~----~~~~~~an~~l~~~~~~~~~~~~~GtT~ 74 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGG---------SP----LDAVLAAQAAVHRWASQGGILGRTGATM 74 (211)
T ss_dssp TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTC---------CH----HHHHHHHHHHHHHHHHHTTCTTSCCEEE
T ss_pred CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccC---------CH----HHHHHHHHHHHHHHHhhccCCCCcchhh
Confidence 4577899999999999999999999999988765421 12 34555555554432 356776
Q ss_pred EEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhh
Q 008015 402 TVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFL 480 (581)
Q Consensus 402 tv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~~~~Rv~G-l~vtRalGD~~~ 480 (581)
+++++...+++ ++++|+||||+|++|+|++.+||+||++.++.++.++ .. . .... ..+||++|+..
T Consensus 75 ~~~~i~~~~~~---~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~~~~~g~-~~----~----~~~~~~~ltralG~~~- 141 (211)
T 3rnr_A 75 AVAAVNLRDGT---LEWASVGDCRVYLFKGGRLSRLSLDHNVSSEMVLLGR-GP----V----PGPAGEMITSFIGIEN- 141 (211)
T ss_dssp EEEEEETTTTE---EEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTTS-CC----C----CSHHHHCBSCCBTCSS-
T ss_pred eeeeeeeCCCE---EEEEEEccCeEEEEeCCEEEEECCCcHHHHHHHHcCC-Ch----h----hCCCccEEecccCCCC-
Confidence 66666422443 5699999999999999999999999999877665554 11 1 1112 56899999642
Q ss_pred hccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhcc--c
Q 008015 481 KQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEARTLR--T 558 (581)
Q Consensus 481 K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~iv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~g--s 558 (581)
..+|++.. ..+...++|+||||||||||+++++++.+++.+ ..+ |+.|++.|+.++ +
T Consensus 142 -------~~~~~~~~-~~~~l~~gd~llL~SDGl~d~~~~~~i~~~l~~---------~~~----a~~L~~~a~~~g~~~ 200 (211)
T 3rnr_A 142 -------LTEISTSE-APLPLEAGEGVLVVSDGVYRSLHEDRIAMALSR---------GSD----ARGILQEVEAQGRPY 200 (211)
T ss_dssp -------CCCCEECS-SCEECCTTCEEEEEEC-----CCTTEEEEEECT---------TSC----HHHHHHHHHHSCTTS
T ss_pred -------CcceeEec-ceecCCCCCEEEEEcCCCCCCcCHHHHHHHHhc---------CCh----HHHHHHHHHHcCCCC
Confidence 22565521 134556789999999999999999999888754 122 889999999999 9
Q ss_pred cCCceEEEEec
Q 008015 559 KDNTSIIFLDF 569 (581)
Q Consensus 559 ~DNiTvIVV~~ 569 (581)
.||+|||||+|
T Consensus 201 ~DNiTvivv~L 211 (211)
T 3rnr_A 201 QDNATLALVIL 211 (211)
T ss_dssp CSSCEEEEEEC
T ss_pred CCceEEEEEeC
Confidence 99999999986
No 19
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.91 E-value=2e-24 Score=197.99 Aligned_cols=135 Identities=65% Similarity=1.051 Sum_probs=106.2
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
...+.|.++.|+..|..|.|......+..++|||.+.|||+|+|+.|||+||+|.++.+++.|+|+|+||+|||||||++
T Consensus 5 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~~ 84 (139)
T 1mzk_A 5 SSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHS 84 (139)
T ss_dssp SEEEEEEECSSTTCSCEEEECTTCSTTCSEEEESSSSCSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTEE
T ss_pred CCeEEEEEEeCCCCCeEEEecCCCCccceEEeeCCCCCCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCEE
Confidence 44789999999999999999875322236999999999999999999999999999987457999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEEEeeccceeccccccccCChhH
Q 008015 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMA 309 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~v~~qn~~~~~~~vg~asd~~~ 309 (581)
+..|+...+.++.++.|++||+|+||.+.+.|+....+++.++|+++|.|+|+|+
T Consensus 85 i~~~~~~~~~~~~~~~L~~GD~I~iG~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 139 (139)
T 1mzk_A 85 ISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVASDPMA 139 (139)
T ss_dssp SSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEECCC---------------
T ss_pred CcCcccccccCCceEECCCCCEEEECCEEEEEEEcCCCccccCCCCcccccccCC
Confidence 9976555555678899999999999999999999999988889999999999863
No 20
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.87 E-value=1.9e-22 Score=182.53 Aligned_cols=111 Identities=24% Similarity=0.341 Sum_probs=92.0
Q ss_pred Cccchhhc-cccceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecC---------CCC
Q 008015 165 EFLPKAIA-DQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWN---------PNK 234 (581)
Q Consensus 165 ~~~p~~~~-~~~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~---------~~~ 234 (581)
.+.|++|+ ++...++|+|++|+.....+.|.... .++|||.+.|||+|+|+.|||+||+|.+. ...
T Consensus 7 py~~P~wa~~p~~~~~L~v~k~g~~~~~~~L~~~~----~~~IGR~~~~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~ 82 (130)
T 4h87_A 7 PYQEPPWGGPATAPYSLETLKGGTILGTRSLKGTS----YCLFGRLSGCDVCLEHPSVSRYHAVLQHRASGPDGECDSNG 82 (130)
T ss_dssp SCCCCTTBCCCCSCCEEEEEETTEEEEEEECTTCS----EEEEESSTTSSEECCCTTSCSSCEEEEEBCCCCCC------
T ss_pred CCCCCCCccCCCCCEEEEEEECCeeeeeEEeCCCc----eEEEcCCcCCCEEeCCCCcchhcEEEEEecccCccceeccC
Confidence 35555654 44447899999999888899997652 48999999999999999999999999763 222
Q ss_pred ceeeEEecccccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEEE
Q 008015 235 LKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (581)
Q Consensus 235 ~~~~l~DlgS~NGT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v 287 (581)
+.|+|+||||+|||||||++|.. +.+++|++||+|+||.++..|+
T Consensus 83 ~~~~l~Dl~StNGT~vNg~ri~~--------~~~~~L~~GD~I~~G~str~yv 127 (130)
T 4h87_A 83 PGFYLYDLGSTHGTFLNKTRIPP--------RTYCRVHVGHVVRFGGSTRLFI 127 (130)
T ss_dssp CCEEEEECSCSSCEEETTEECCT--------TCCEECCTTCEEEETTCSEEEE
T ss_pred CcceEeeCCCCCceEECCEECCC--------CceeECCCCCEEEECCceEEEE
Confidence 47999999999999999999984 4678999999999999887765
No 21
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.83 E-value=1e-20 Score=168.41 Aligned_cols=105 Identities=33% Similarity=0.564 Sum_probs=94.3
Q ss_pred cccceEEEEEeecCCCceeeeeeccCCCCcceeecCc-CCCcceeeccccccceeEEecCCCCceeeEEecccccccccc
Q 008015 173 DQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRV-SPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLN 251 (581)
Q Consensus 173 ~~~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~-~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vn 251 (581)
+..+.+.|.++.|+..|+.+.|..+. .++|||. +.|||+|+|+.|||+||+|.++++ .|+|+|++|+||||||
T Consensus 8 ~~~p~l~L~v~~g~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGT~vn 81 (118)
T 1uht_A 8 MVTPSLRLVFVKGPREGDALDYKPGS----TIRVGRIVRGNEIAIKDAGISTKHLRIESDSG--NWVIQDLGSSNGTLLN 81 (118)
T ss_dssp CCSCEEEEEESSSTTTTCBCCBCTTC----CEEEESSSTTCSEECCSSSSCTTCEEEEECSS--SEEEECCCCSSCCEES
T ss_pred CCCCeEEEEEEeCCCCCcEEEECCCC----EEEEcCCCCCCCEEeCCCCCchHHeEEEEECC--EEEEEECCCCCCeEEC
Confidence 44568999999999999999998742 6999999 899999999999999999999888 8999999999999999
Q ss_pred cccCCCCCCCCCCCCCCcccCCCCeEEecccceEEEEEee
Q 008015 252 SQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (581)
Q Consensus 252 g~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~v~~ 291 (581)
|+++.. +.++.|++||+|+||.+.+.++.+..
T Consensus 82 g~~l~~--------~~~~~L~~gd~i~lG~~~~~~~~~~~ 113 (118)
T 1uht_A 82 SNALDP--------ETSVNLGDGDVIKLGEYTSILVNFVS 113 (118)
T ss_dssp SSBCCT--------TCEEECCTTEEEEETTTEEEEEEEEC
T ss_pred CEECCC--------CCeEEcCCCCEEEECCeEEEEEEEec
Confidence 999984 45789999999999999988886654
No 22
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.83 E-value=1e-20 Score=165.23 Aligned_cols=99 Identities=27% Similarity=0.425 Sum_probs=87.7
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcC-CCcceeeccccccceeEEecCCCCceeeEEecccccccccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~-~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~ 253 (581)
+..+.|.++.|+..|+.+.|..+. .++|||.+ .|||+|+|+.|||+||+|.+..+ +.|+|+|++|+|||||||+
T Consensus 2 ~~~~~L~v~~G~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~-~~~~l~Dl~S~nGt~vng~ 76 (106)
T 3gqs_A 2 PSRFLLKVLAGANIGAEFHLDSGK----TYIVGSDPQVADIVLSDMSISRQHAKIIIGND-NSVLIEDLGSKNGVIVEGR 76 (106)
T ss_dssp -CEEEEEECC-CCTTCEEEECTTC----EEEEESCTTTCSEECCCTTSCSSCEEEEECTT-SCEEEEECSCSSCCEETTE
T ss_pred CceEEEEEEeCCCCcEEEEECCCC----EEEEeECCCcCCEEeCCCCcchhhcEEEECCC-CcEEEEECcCCCCeEECCE
Confidence 457889999999999999999763 58999999 79999999999999999999843 2799999999999999999
Q ss_pred cCCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 008015 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (581)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~ 288 (581)
++.. +..|++||+|++|.+.+.|..
T Consensus 77 ~i~~----------~~~L~~Gd~i~~G~~~~~~~~ 101 (106)
T 3gqs_A 77 KIEH----------QSTLSANQVVALGTTLFLLVD 101 (106)
T ss_dssp ECSS----------EEECCTTCCEEETTEEEEEEE
T ss_pred ECCC----------CeECCCCCEEEECCEEEEEEc
Confidence 9984 379999999999999988874
No 23
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.82 E-value=2.8e-20 Score=168.67 Aligned_cols=113 Identities=21% Similarity=0.219 Sum_probs=91.5
Q ss_pred CCccchhhccccceEEEEEeecCC-CceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEec
Q 008015 164 PEFLPKAIADQRSCLSLEVVSGPS-RGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDM 242 (581)
Q Consensus 164 ~~~~p~~~~~~~~~~~L~v~~g~~-~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl 242 (581)
++..|...+.+ +...|.++.|+. .|+.|+|..+ .++|||.+.|||+|+|+.|||+||+|.+...++.|+|+|+
T Consensus 12 ~~~~~~~~~~~-p~g~L~v~~g~~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl 85 (132)
T 3va4_A 12 SGLVPRGSHME-PIGQLRLFSGTHGPERDFPLYLG-----KNVVGRSPDCSVALPFPSISKQHAVIEISAWNKAPILQDC 85 (132)
T ss_dssp --------CCC-CSEEEEECCBTTBSCEEEEECSE-----EEEEESSTTSSEECCCTTSCTTCEEEEECSTTSCCEEEEC
T ss_pred ccccCccccCC-CcEEEEEEeCCCCCceEEEECCC-----CEEEccCCCCCEEeCCCCcChhHEEEEEEcCCCEEEEEEC
Confidence 44455544433 356899999999 9999999987 7999999999999999999999999999853348999999
Q ss_pred ccccccccccccC-CCCCCCCCCCCCCcccCCCCeEEecccceEEEEE
Q 008015 243 GSLNGTLLNSQPI-NHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (581)
Q Consensus 243 gS~NGT~vng~~i-~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~v 289 (581)
+|+|||||||+++ -. ++.++.|++||+|+||.+.+.|...
T Consensus 86 ~S~NGT~vNg~~i~l~-------~~~~~~L~~GD~I~lG~~~l~f~~~ 126 (132)
T 3va4_A 86 GSLNGTQIVKPPRVLP-------PGVSHRLRDQELILFADFPCQYHRL 126 (132)
T ss_dssp SCSSCEEETTTTEEEC-------TTCCEECCTTCEEEETTEEEEEEEC
T ss_pred CCCCCeEECCEEcccC-------CCCEEECCCCCEEEECCEEEEEEEC
Confidence 9999999999995 11 2456899999999999999998854
No 24
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.81 E-value=3.6e-20 Score=164.22 Aligned_cols=96 Identities=31% Similarity=0.536 Sum_probs=88.9
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
...+.|.++.|+..|..+.|... .++|||.+.|||+|+|+.|||+||+|.+..+ .|+|+|++|+|||||||++
T Consensus 9 ~~~~~L~v~~g~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~ 81 (115)
T 2xt9_B 9 SGSALLVVKRGPNAGSRFLLDQP-----TTSAGRHPDSDIFLDDVTVSRRHAEFRLEGG--EFQVVDVGSLNGTYVNREP 81 (115)
T ss_dssp CSCEEEEEEESTTTTCEEEECSS-----EEEEESSTTSSEECCSTTSCSSCEEEEEETT--EEEEEECSCSSCEEETTEE
T ss_pred CCcEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEeCCcccChhheEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 44678999999999999999987 7999999999999999999999999999987 9999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 008015 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~ 288 (581)
+.. ..|++||+|+||.+.+.|..
T Consensus 82 i~~-----------~~L~~gd~i~iG~~~l~~~~ 104 (115)
T 2xt9_B 82 VDS-----------AVLANGDEVQIGKFRLVFLT 104 (115)
T ss_dssp CSE-----------EEECTTCEEEETTEEEEEEC
T ss_pred cce-----------EECCCCCEEEECCEEEEEEe
Confidence 884 89999999999999888764
No 25
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.81 E-value=6.9e-20 Score=168.33 Aligned_cols=96 Identities=35% Similarity=0.541 Sum_probs=89.0
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
...+.|.++.|+..|..|.|... .++|||.+.|||+|+|+.|||+||+|.+.++ .|+|+|+||+|||||||++
T Consensus 44 ~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~--~~~l~DlgS~NGT~VNg~~ 116 (143)
T 2kb3_A 44 AGSALLVVKRGPNAGARFLLDQP-----TTTAGRHPESDIFLDDVTVSRRHAEFRINEG--EFEVVDVGSLNGTYVNREP 116 (143)
T ss_dssp SSCEEEEEEESTTTTCEEEECSS-----EEEESSCTTCSBCCCCSSCCSSSEEEEEETT--EEEEEESCCSSCCEETTEE
T ss_pred CccEEEEEEeCCCCCeEEEeCCC-----CeeccCCCCCCEEeCCCCcChhhEEEEEECC--EEEEEECCCcCCeEECCEE
Confidence 44688999999999999999877 7999999999999999999999999999877 9999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 008015 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~ 288 (581)
+.. +.|++||+|+||.+.+.|..
T Consensus 117 i~~-----------~~L~~GD~I~iG~~~l~f~~ 139 (143)
T 2kb3_A 117 RNA-----------QVMQTGDEIQIGKFRLVFLA 139 (143)
T ss_dssp CSE-----------EECCTTEEEEETTEEEEEEE
T ss_pred cce-----------EECCCCCEEEECCEEEEEEe
Confidence 984 89999999999999888763
No 26
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.80 E-value=7.4e-20 Score=158.07 Aligned_cols=94 Identities=29% Similarity=0.484 Sum_probs=85.4
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
++.+.|.+..|+ |+.+++..+ .++|||.+.|||+++|+.|||+||+|.+.++ .|+|+|++|+|||||||++
T Consensus 3 ~~~~~l~~~~g~--g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~ 73 (100)
T 3po8_A 3 GTSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAP 73 (100)
T ss_dssp CEEEEEEECSSS--CCEEECCSE-----EEEEESSTTCSEECCCTTSCSSCEEEEECSS--CEEEEECSCSSCCEETTEE
T ss_pred CcEEEEEEECCC--CcEEEECCC-----CEEEeCCCCCCEECCCCCcChhhCEEEEeCC--EEEEEECCCCCCEEECCEE
Confidence 446778888886 889999887 7999999999999999999999999999887 8999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 008015 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~ 288 (581)
+.. ++|++||.|++|.+.+.|..
T Consensus 74 i~~-----------~~L~~gd~i~iG~~~~~~~~ 96 (100)
T 3po8_A 74 VQE-----------WQLADGDVIRLGHSEIIVRM 96 (100)
T ss_dssp CSE-----------EECCTTCEEEETTEEEEEEE
T ss_pred Cce-----------EECCCCCEEEECCEEEEEEE
Confidence 874 89999999999999888763
No 27
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.79 E-value=3.5e-20 Score=169.95 Aligned_cols=102 Identities=20% Similarity=0.301 Sum_probs=90.0
Q ss_pred ccceEEEEEeecCCCceeeeeeccCCCCcceeecCcCC-CcceeeccccccceeEEecCCCCceeeEEeccccccccccc
Q 008015 174 QRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSP-SDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (581)
Q Consensus 174 ~~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~-~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng 252 (581)
+...++|.++.|+..+..+.|.... .++|||.+. |||+|+|+.|||+||+|.++...+.|+|+||+|+|||||||
T Consensus 31 p~~~~~L~v~~g~~~g~~~~l~~~~----~~~IGR~~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~vNg 106 (140)
T 2jpe_A 31 PPPGLHLDVVKGDKLIEKLIIDEKK----YYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGH 106 (140)
T ss_dssp CCSSCBEEEESSSSEEEEECCSSCS----BCCBSSCTTTSSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEESSS
T ss_pred CCcCEEEEEEcCCCcceEEEeCCCC----eEEecCCCccCCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCeEECC
Confidence 3446889999999999999998752 499999998 99999999999999999999833489999999999999999
Q ss_pred ccCCCCCCCCCCCCCCcccCCCCeEEecccceEEE
Q 008015 253 QPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (581)
Q Consensus 253 ~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v 287 (581)
+++.. +.++.|.+||+|+||.+.+.|.
T Consensus 107 ~~l~~--------~~~~~L~~gd~i~~G~~~~~f~ 133 (140)
T 2jpe_A 107 IRLEP--------HKPQQIPIDSTVSFGASTRAYT 133 (140)
T ss_dssp CEECS--------SSCCEECTTCCBBCSSCCCCBC
T ss_pred EECCC--------CccEECCCCCEEEECCceEEEE
Confidence 99983 4579999999999999887654
No 28
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.79 E-value=1.6e-19 Score=169.04 Aligned_cols=96 Identities=33% Similarity=0.543 Sum_probs=88.6
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
...+.|.++.|+..|..|.|... .++|||.+.|||+|+|+.|||+||+|.+..+ .|+|+|+||+|||||||++
T Consensus 53 ~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~--~~~l~DlgS~NGT~VNg~~ 125 (162)
T 2kfu_A 53 PGSALLVVKRGPNAGSRFLLDQA-----ITSAGRHPDSDIFLDDVTVSRRHAEFRLENN--EFNVVDVGSLNGTYVNREP 125 (162)
T ss_dssp SSCCEEEEEESTTCSCEEETTSS-----EEEEESCSSSSEESTTTSSSSCSEEEEEETT--EEEEECCCCSSCEEETTBC
T ss_pred CccEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEECCCCcChhhEEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 34678999999999999999876 7999999999999999999999999999887 9999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 008015 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~ 288 (581)
+.. ..|++||+|+||.+.+.|..
T Consensus 126 i~~-----------~~L~~GD~I~iG~~~l~f~~ 148 (162)
T 2kfu_A 126 VDS-----------AVLANGDEVQIGKFRLVFLT 148 (162)
T ss_dssp CSE-----------EECCSSCEEEETTEEEEEEC
T ss_pred cce-----------EECCCCCEEEECCEEEEEEe
Confidence 984 89999999999998888763
No 29
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.79 E-value=1.7e-19 Score=162.94 Aligned_cols=100 Identities=22% Similarity=0.226 Sum_probs=89.0
Q ss_pred cceEEEEEee-cCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccc
Q 008015 175 RSCLSLEVVS-GPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (581)
Q Consensus 175 ~~~~~L~v~~-g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~ 253 (581)
++...|.++. |+..|..+.|... .++|||.+.|||+|+|+.|||+||+|.+.++ .|+|+|++|+|||||||+
T Consensus 10 ~~~~~L~v~~~~~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vNg~ 82 (128)
T 1r21_A 10 WPTRRLVTIKRSGVDGPHFPLSLS-----TCLFGRGIECDIRIQLPVVSKQHCKIEIHEQ--EAILHNFSSTNPTQVNGS 82 (128)
T ss_dssp CCCEEEEEEEETTEEEEEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEECCCCSSSCCEETTE
T ss_pred CCceEEEEEeCCCCCceEEEECCC-----CEEECCCCCCCEEECCCCCChhHEEEEEECC--EEEEEECCCCCCEEECCE
Confidence 4467888887 5888999999876 7999999999999999999999999999887 999999999999999999
Q ss_pred cCCCCCCCCCCCCCCcccCCCCeEEecccceEEEEEee
Q 008015 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (581)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~v~~ 291 (581)
++.. ++.|++||+|+||.+.+.|.....
T Consensus 83 ~i~~----------~~~L~~Gd~i~iG~~~~~~~~~~~ 110 (128)
T 1r21_A 83 VIDE----------PVRLKHGDVITIIDRSFRYENESL 110 (128)
T ss_dssp ECSS----------CEECCTTEEEECSSCEEEEEEC--
T ss_pred ECCC----------cEEcCCCCEEEECCEEEEEEeCCc
Confidence 9984 489999999999999988876443
No 30
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.77 E-value=7.1e-19 Score=159.32 Aligned_cols=102 Identities=19% Similarity=0.312 Sum_probs=85.8
Q ss_pred eEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCC---ceeeEEec-----cccccc
Q 008015 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNK---LKWELVDM-----GSLNGT 248 (581)
Q Consensus 177 ~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~---~~~~l~Dl-----gS~NGT 248 (581)
...+.++.++..++.+.|... .++|||.+.|||+|+|+.|||+||+|.+.... ..|+|+|+ +|+|||
T Consensus 10 ~~~~lvv~~~~~~~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT 84 (131)
T 3hx1_A 10 QEHILIILDDAGRREVLLTET-----FYTIGRSPRADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGL 84 (131)
T ss_dssp CEEEEEEEETTEEEEEEECSS-----EEEEESSTTSSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSCE
T ss_pred cceEEEEECCCCcEEEEECCC-----CEEECCCCCCCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCce
Confidence 344666666777899999887 79999999999999999999999999997421 24999999 899999
Q ss_pred ccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEEEEEeeccc
Q 008015 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETV 294 (581)
Q Consensus 249 ~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~v~~qn~ 294 (581)
||||+++.. +.|++||+|+||.+.+.+..+..+..
T Consensus 85 ~vNg~~i~~-----------~~L~~GD~I~iG~~~~~~~~~~~~d~ 119 (131)
T 3hx1_A 85 MINGKKVQE-----------HIIQTGDEIVMGPQVSVRYEYRRRDQ 119 (131)
T ss_dssp EETTEEESE-----------EECCTTCEEECSTTCEEEEEEECC--
T ss_pred EECCEEeEe-----------EECCCCCEEEECCEEEEEEEEecCCC
Confidence 999999984 89999999999999999887665443
No 31
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.76 E-value=6.8e-19 Score=164.24 Aligned_cols=97 Identities=26% Similarity=0.339 Sum_probs=82.5
Q ss_pred cceEEEEEeecCC----CceeeeeeccCCCCcceeecCcC---------------CCcceeeccccccceeEEecCCCCc
Q 008015 175 RSCLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNKL 235 (581)
Q Consensus 175 ~~~~~L~v~~g~~----~g~~~~l~~~~~~~~~~~iGR~~---------------~~di~l~d~~VSr~Ha~I~~~~~~~ 235 (581)
...+.|+|+.|+. ....+.|...+ .++|||.+ .|||+|+++.|||+||+|.+..+.+
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~~~~----~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~ 104 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRG 104 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETT
T ss_pred CCceEEEEEeCCccCcccceEEEecCCC----ceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCC
Confidence 4578899998876 55688887764 69999995 4999999999999999999988721
Q ss_pred --eeeEEecccccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccc
Q 008015 236 --KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (581)
Q Consensus 236 --~~~l~DlgS~NGT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~ 283 (581)
.|+|+||||+|||||||+++.. +.+++|++||+|+||.+.
T Consensus 105 ~~~~~l~Dl~StNGT~VNg~ri~~--------~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 105 ILKCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp EEEEEEEECSCSSCCEETTEECCT--------TCCEECCTTEEEESSSCG
T ss_pred eeEEEEEeCCCCCccEECCEEcCC--------CceEEcCCCCEEEECCCC
Confidence 2999999999999999999985 457899999999999553
No 32
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.76 E-value=7.1e-19 Score=163.22 Aligned_cols=92 Identities=29% Similarity=0.506 Sum_probs=82.8
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
...+.|.+..|+ ++.+.|... .++|||.+.|||+|+|+.|||+||+|.++.+ .|+|+||+|+|||||||++
T Consensus 65 g~~l~L~v~~g~--g~~~~L~~~-----~~~IGR~~~~dI~L~d~~VSr~HA~I~~~~~--~~~l~DlgStNGT~VNG~~ 135 (157)
T 3oun_A 65 GTSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAP 135 (157)
T ss_dssp --CCEEEETTTT--CCEEECCSE-----EEEEESSTTCSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEE
T ss_pred CcEEEEEEcCCC--CeEEEECCC-----cEEEEeCCCCCEEeCCCCcChhHEEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 345677777775 889999987 7999999999999999999999999999888 8999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEE
Q 008015 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~ 286 (581)
+.. ..|++||+|+||.+.+.|
T Consensus 136 i~~-----------~~L~~GD~I~lG~~~l~f 156 (157)
T 3oun_A 136 VQE-----------WQLADGDVIRLGHSEIIV 156 (157)
T ss_dssp CSE-----------EECCTTCEEEETTEEEEE
T ss_pred Cce-----------EECCCCCEEEECCEEEEE
Confidence 974 899999999999998876
No 33
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.75 E-value=4.5e-18 Score=169.15 Aligned_cols=194 Identities=18% Similarity=0.170 Sum_probs=125.8
Q ss_pred ccCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhc
Q 008015 315 KKLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNH 394 (581)
Q Consensus 315 ~R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~~~~i~~ 394 (581)
.+..+.|.|.+....++..+|+|+||+|+...|.+++..+...+...+... ..+.+ ++..+|+.+..
T Consensus 19 ~~~v~GD~y~~~~~~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~---------~~~~~----~l~~~n~~l~~ 85 (242)
T 3t91_A 19 GGLVSGDSYSMMELGARKYAAAISDGMGNGARAHFESNETIKLLEKILESG---------IDEKI----AIKTINSILSL 85 (242)
T ss_dssp SCSCCSCEEEEEEETTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHT---------CCHHH----HHHHHHHHHTT
T ss_pred ccccCCcEEEEEEeCCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhC---------CCHHH----HHHHHHHHHHh
Confidence 356789998765333456679999999999999999998888887655432 12333 33334444432
Q ss_pred c---cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchh
Q 008015 395 H---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNL 471 (581)
Q Consensus 395 ~---~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~~~~Rv~Gl~v 471 (581)
. ..++|++++++...+++ ++++|+||+|+|++++|++.+|+.++.+ .|+
T Consensus 86 ~~~~~~~~T~~~~~id~~~~~---l~~~~aG~~~~~l~r~g~~~~l~~~~~~-----------------------lG~-- 137 (242)
T 3t91_A 86 RTTDEIYSTLDLSIIDLQDAS---CKFLKVGSTPSFIKRGDQVMKVQASNLP-----------------------IGI-- 137 (242)
T ss_dssp C----CCCCEEEEEEETTTCE---EEEEEESCCCEEEEETTEEEECCCC----------------------------C--
T ss_pred cCCCCeEeEEEEEEEECCCCE---EEEEcCCCCceEEEECCEEEEecCCCce-----------------------eEe--
Confidence 2 34567666666433443 5689999999999999988888654322 221
Q ss_pred hhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceecc-----HHHHHHHHHHHhhhhcccccchHHHHH
Q 008015 472 ARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS-----VKKAIQLVVQMREKYSADKENSTEKIA 546 (581)
Q Consensus 472 tRalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls-----~~ei~~iv~~~~~~~~~~~~~~~~~~A 546 (581)
.....+. ...+...++|.|+||||||||.++ ...+.+++... ...++++++
T Consensus 138 ----------------~~~~~~~-~~~~~l~~GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~-------~~~~~~~~~ 193 (242)
T 3t91_A 138 ----------------INEFDVE-VVSEQLKAGDLLIMMSDGIFEGPKHVENHDLWMKRKMKGL-------KTNDPQEIA 193 (242)
T ss_dssp ----------------CCTTCEE-EEEEECCTTCEEEEECHHHHTCSTTCSCHHHHHHHHHHTC-------CCCCHHHHH
T ss_pred ----------------cCCCcce-EEEEEeCCCCEEEEECCCcccCCCcccchHHHHHHHHHHh-------cCCCHHHHH
Confidence 0111221 224566689999999999999998 45555555431 136789999
Q ss_pred HHHhhhhhhcc-c--cCCceEEEEecCCcc
Q 008015 547 NVLLSEARTLR-T--KDNTSIIFLDFDSTF 573 (581)
Q Consensus 547 ~~Lv~~A~~~g-s--~DNiTvIVV~~~~~~ 573 (581)
+.|++.+...+ . .||+|+|++++....
T Consensus 194 ~~l~~~~~~~~~~~~~DDiTvv~i~~~~~~ 223 (242)
T 3t91_A 194 DLLMEEVIRTRSGQIEDDMTVVVVRIDHNT 223 (242)
T ss_dssp HHHHHHHHHHTTSCCCSCEEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCCCCceEEEEEEEecCC
Confidence 99999997765 3 599999999997653
No 34
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.72 E-value=8.5e-18 Score=161.63 Aligned_cols=97 Identities=27% Similarity=0.368 Sum_probs=81.2
Q ss_pred cceEEEEEeecCC----CceeeeeeccCCCCcceeecCcC---------------CCcceeeccccccceeEEecCCCC-
Q 008015 175 RSCLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNK- 234 (581)
Q Consensus 175 ~~~~~L~v~~g~~----~g~~~~l~~~~~~~~~~~iGR~~---------------~~di~l~d~~VSr~Ha~I~~~~~~- 234 (581)
...+.|+|+.+.. ....+.|...+ .++|||.+ .|||+|+++.|||+||+|.+..+.
T Consensus 76 ~~~~~L~v~k~g~k~~~~i~~~~L~~~s----~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~ 151 (205)
T 3elv_A 76 RTMYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRG 151 (205)
T ss_dssp SCCEEEEEEEGGGCTTCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETT
T ss_pred CCceEEEEEeCCCcccccceEEEecCCC----ceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCC
Confidence 3468899998755 45678886553 69999995 499999999999999999987652
Q ss_pred -ceeeEEecccccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccc
Q 008015 235 -LKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (581)
Q Consensus 235 -~~~~l~DlgS~NGT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~ 283 (581)
..|+|+||||+|||||||++|.. +.+++|++||+|+||..+
T Consensus 152 ~~~~~l~DLgStNGTfVNG~rI~~--------~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 152 ILKCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EEEEEEEECSCSSCCEETTEECCB--------TSCEECCTTCEEESSSSG
T ss_pred ceeEEEEeCCCCCCCeECCEECCC--------CceeECCCCCEEEECCCC
Confidence 24999999999999999999984 456899999999999654
No 35
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.71 E-value=5.2e-18 Score=161.86 Aligned_cols=112 Identities=16% Similarity=0.157 Sum_probs=93.4
Q ss_pred CCccchhhccccceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCC----------
Q 008015 164 PEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN---------- 233 (581)
Q Consensus 164 ~~~~p~~~~~~~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~---------- 233 (581)
....|.+.......+.|....++..+..+.|..+.. +++|||.+.|||+|+|+.|||+||+|.+...
T Consensus 16 ~~~~~~~~~~~g~~l~L~~~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~ 92 (182)
T 1qu5_A 16 ENVKSSKKKGNGRFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESP 92 (182)
T ss_dssp GGSSCSCCSSSSCCEEECCCTTSSSCSCCCBTTCCS---SEEESSSTTSSSCCCCTTSCSSCEEEEEECCCCCSSCCSSC
T ss_pred hHceecccCCCccEEEEEeCCCCCcceEEEEcCCCc---eEEECCCCCCCEEECCCCcChHHeEEEEecCcccccccccc
Confidence 455555566666677788888888888999987622 4999999999999999999999999998760
Q ss_pred ---CceeeEEecccccccccccccCCCCCCCCCCCCCCcccCCCCeEEe-----cccceEEE
Q 008015 234 ---KLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHV 287 (581)
Q Consensus 234 ---~~~~~l~DlgS~NGT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~l-----G~~~~~~v 287 (581)
.+.|+|+|+ |+|||||||++|.. +.++.|.+||+|+| |.+.+.|.
T Consensus 93 ~~~~~~~~l~Dl-StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~ 145 (182)
T 1qu5_A 93 AQGLDDIWYCHT-GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFK 145 (182)
T ss_dssp CCSCCEEEECCC-SSSCCEETTEECCS--------SEEEECCTTBCCEEEEEGGGTEEEECC
T ss_pred ccccceEEEEEC-CcCCeEECCEEcCC--------CcceEcCCCCEEEEEEcCCCCEEEEEE
Confidence 038999999 99999999999984 56799999999999 98877664
No 36
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.71 E-value=2.3e-17 Score=146.25 Aligned_cols=92 Identities=23% Similarity=0.242 Sum_probs=79.3
Q ss_pred eEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeecc-ccccceeEEecCCCCceeeEEecccccccccccccC
Q 008015 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI 255 (581)
Q Consensus 177 ~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~-~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~i 255 (581)
..+|..+.+...+..+.|... .++|||.+.|||+|+|. .|||+||+|.++...+.|+|+| +|+|||||||+++
T Consensus 4 wg~L~~~~~~~~~~~~~l~~~-----~~~iGR~~~~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~~l 77 (116)
T 1lgp_A 4 WGRLLRLGAEEGEPHVLLRKR-----EWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTVINKLKV 77 (116)
T ss_dssp CEEECCTTCCSSSCCEEECSS-----EEEEESSTTSSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCCCCCCCC
T ss_pred EEEEEEeCCCCCccEEEECCC-----CEEECCCCCCCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcEECCEEc
Confidence 346777766667788999877 79999999999999875 9999999999974334899999 9999999999999
Q ss_pred CCCCCCCCCCCCCcccCCCCeEEeccc
Q 008015 256 NHPDSGSRHWGKPMELTSGDIITLGTT 282 (581)
Q Consensus 256 ~~p~~~~~~~g~~~~L~~Gd~i~lG~~ 282 (581)
.. +.++.|++||+|+||..
T Consensus 78 ~~--------~~~~~L~~GD~i~~G~~ 96 (116)
T 1lgp_A 78 VK--------KQTCPLQTGDVIYLVYR 96 (116)
T ss_dssp CC--------SSCCCCCTTCEEEEECC
T ss_pred CC--------CCcEECCCCCEEEEecc
Confidence 84 56799999999999986
No 37
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.70 E-value=2.8e-17 Score=146.67 Aligned_cols=94 Identities=17% Similarity=0.084 Sum_probs=80.0
Q ss_pred eEEEEEeec-CCC----ceeeeeeccCCCCcceeecC--cCCCcceeeccccccceeEEecCCCCceeeEEecccccccc
Q 008015 177 CLSLEVVSG-PSR----GIRCSVQSANASRLPLTLGR--VSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (581)
Q Consensus 177 ~~~L~v~~g-~~~----g~~~~l~~~~~~~~~~~iGR--~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~ 249 (581)
..+|.++.+ +.. +..+.|..+ .++||| .+.|||+|+++.|||+||+|.+.++ .|+|+|++|+||||
T Consensus 11 ~p~Lv~l~~d~~~s~~~~~~~~L~~~-----~~~IGr~r~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~dl~S~ngt~ 83 (120)
T 1wln_A 11 LPYLVELSPDGSDSRDKPKLYRLQLS-----VTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDG--VVTVTPRSMDAETY 83 (120)
T ss_dssp CCEEEEECSSSCCCSSCCCEEECCSE-----EEECSSSCCSTTCCCCCCTTCCSSCEEEEESSS--CEEEEESCSSSCEE
T ss_pred cCEEEEeCCChhhccCccEEEEECCC-----CEEECCCCCCCCcEEECCCCCchhheEEEEcCC--EEEEEECCCCCCEE
Confidence 345777654 332 889999887 799996 4799999999999999999999877 89999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccCCCCeEEecc-cceEEE
Q 008015 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGT-TSSIHV 287 (581)
Q Consensus 250 vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~-~~~~~v 287 (581)
|||+++.. ++.|++||+|+||. +.++|.
T Consensus 84 vNg~~i~~----------~~~L~~GD~I~iG~~~~~~f~ 112 (120)
T 1wln_A 84 VDGQRISE----------TTMLQSGMRLQFGTSHVFKFV 112 (120)
T ss_dssp ETSCBCSS----------CEEECTTCEEEETTTEEEEEE
T ss_pred ECCEEcCC----------CEECCCCCEEEECCceEEEEE
Confidence 99999985 47999999999999 555554
No 38
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.70 E-value=1.9e-17 Score=153.59 Aligned_cols=95 Identities=25% Similarity=0.356 Sum_probs=80.1
Q ss_pred ceEEEEEeecCCCceeeeeec-cCCCCcceeecCcCCCcceeeccccccceeEEec--------CCCCceeeEEeccccc
Q 008015 176 SCLSLEVVSGPSRGIRCSVQS-ANASRLPLTLGRVSPSDVLLKDSEVSGKHALINW--------NPNKLKWELVDMGSLN 246 (581)
Q Consensus 176 ~~~~L~v~~g~~~g~~~~l~~-~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~--------~~~~~~~~l~DlgS~N 246 (581)
....|.++ ++..|..+.|.. . .++|||.+.|||+|+|+.|||+||+|.+ ..+ .|+|+|+ |+|
T Consensus 17 ~~~~L~~~-~~~~g~~~~l~~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~--~~~l~Dl-S~N 87 (151)
T 2jqj_A 17 CLGHLVNL-IPGKEQKVEITNRN-----VTTIGRSRSCDVILSEPDISTFHAEFHLLQMDVDNFQRN--LINVIDK-SRN 87 (151)
T ss_dssp EEEEEEEE-ETTEEEEEEEECCS-----CEEEESSTTSSEECCCTTCCTTSEEEEEEEEEETTEEEE--EEEEEEC-CSS
T ss_pred ceEEEEEe-cCCCceEEEEcCCC-----eEEeCCCCCCCEEECCCCCccccCEEEEecccCCcCcCC--EEEEEEC-CCC
Confidence 35556665 455689999985 4 7999999999999999999999999999 344 8999999 999
Q ss_pred ccccccccCCCCCCCCCCCCCCcccCCCCeEEeccc-ceEEEE
Q 008015 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT-SSIHVQ 288 (581)
Q Consensus 247 GT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~-~~~~v~ 288 (581)
||||||+++.. + +..|.+||+|+||.+ .+.|..
T Consensus 88 GT~VNg~~i~~--------~-~~~L~~GD~I~lG~~~~~~f~~ 121 (151)
T 2jqj_A 88 GTFINGNRLVK--------K-DYILKNGDRIVFGKSCSFLFKY 121 (151)
T ss_dssp CEEETTEECCS--------S-CEEECSSEEEEETTTEEEEEEE
T ss_pred CeEECCEEcCC--------C-ceECCCCCEEEECCCcEEEEEE
Confidence 99999999984 3 689999999999995 555543
No 39
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.70 E-value=1.4e-17 Score=155.72 Aligned_cols=101 Identities=18% Similarity=0.183 Sum_probs=87.1
Q ss_pred ceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCC-------------CceeeEEec
Q 008015 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN-------------KLKWELVDM 242 (581)
Q Consensus 176 ~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~-------------~~~~~l~Dl 242 (581)
..+.|....++..++.+.|..+.. +++|||.+.|||+|+|+.|||+||+|.+... .+.|+|+|+
T Consensus 4 ~~l~L~p~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~Dl 80 (158)
T 1dmz_A 4 RFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT 80 (158)
T ss_dssp CCEEEEECTTSSCCCCEEETTSCS---CEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEEC
T ss_pred eEEEEEeCCCCccceEEEEcCCCc---eEEECCCCCCCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEEC
Confidence 357788888888889999987622 5999999999999999999999999998760 038999999
Q ss_pred ccccccccccccCCCCCCCCCCCCCCcccCCCCeEEe-----cccceEEEE
Q 008015 243 GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHVQ 288 (581)
Q Consensus 243 gS~NGT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~l-----G~~~~~~v~ 288 (581)
|+|||||||+++.. +.+++|.+||+|+| |.+.+.|..
T Consensus 81 -StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~~ 122 (158)
T 1dmz_A 81 -GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFKV 122 (158)
T ss_dssp -STTCCEETTEECCS--------SEEEECCSSCCEESCCCTTTTCCCCEEE
T ss_pred -CcCCeEECCEEcCC--------CceEEcCCCCEEEEeecCCCCEEEEEEE
Confidence 99999999999984 56799999999999 998877763
No 40
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.69 E-value=3.1e-17 Score=154.22 Aligned_cols=97 Identities=27% Similarity=0.279 Sum_probs=83.2
Q ss_pred cceEEEEEeecCCCceeeeeecc------CCCCcceeecCcCCCcceeecc-ccccceeEEecC-CCCceeeEEeccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWN-PNKLKWELVDMGSLN 246 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~------~~~~~~~~iGR~~~~di~l~d~-~VSr~Ha~I~~~-~~~~~~~l~DlgS~N 246 (581)
...+.|.++.|+..|..+.+... ......++|||.+.|||+|+|+ .|||+||+|.+. ++ .|+|+|+ |+|
T Consensus 31 ~~~~~L~v~~G~~~g~~~~l~~~~v~~~~~~~~~~~~IGR~~~~di~l~d~~~vSr~Ha~I~~~~~g--~~~l~Dl-S~N 107 (164)
T 1g3g_A 31 NIVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGEDG--NLLLNDI-STN 107 (164)
T ss_dssp SCCEEEECSSSSSCCEEECCCHHHHHHCSSSCCEEEEEESSSSSSEECCCCTTTTSSCEEEEECSTT--CEEEEEC-CSS
T ss_pred CccEEEEEecCCCCCeEEEeccccccccccccCCcEEECCCCCCCEEeCCcCCcChhHEEEEECCCC--CEEEEEC-CCC
Confidence 34678999999999999999853 0011158999999999999997 699999999995 55 8999999 999
Q ss_pred ccccccccCCCCCCCCCCCCCCcccCCCCeEEeccc
Q 008015 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (581)
Q Consensus 247 GT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~ 282 (581)
||||||+++.. +.++.|.+||+|+||.+
T Consensus 108 GT~vNg~~i~~--------~~~~~L~~GD~I~iG~~ 135 (164)
T 1g3g_A 108 GTWLNGQKVEK--------NSNQLLSQGDEITVGVG 135 (164)
T ss_dssp CEEETTEEECT--------TEEEECCTTCEEEESCS
T ss_pred CeEECCEEcCC--------CCceEcCCCCEEEECCC
Confidence 99999999984 46799999999999996
No 41
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.68 E-value=1.7e-16 Score=158.35 Aligned_cols=192 Identities=16% Similarity=0.123 Sum_probs=128.2
Q ss_pred cCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhcc
Q 008015 316 KLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH 395 (581)
Q Consensus 316 R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~~~~i~~~ 395 (581)
+..+.|.|.+....++..+|+|+||+|+...|..++..+...+...+.... .+. +++..+|+.+...
T Consensus 23 ~~vgGD~y~~~~~~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~---------~~~----~~l~~~n~~l~~~ 89 (242)
T 3pu9_A 23 TRESGDTVELVERPGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGV---------RDG----AAARAAHDFLYAM 89 (242)
T ss_dssp CSSCSEEEEEEECTTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTC---------CHH----HHHHHHHHHHHHH
T ss_pred cccCCceEEEEEeCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCC---------CHH----HHHHHHHHHHHhc
Confidence 455779886653333456799999999999999999988888876554321 222 2333333333222
Q ss_pred ---cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhh
Q 008015 396 ---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLA 472 (581)
Q Consensus 396 ---~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~~~~Rv~Gl~vt 472 (581)
...+|++++.+...++. ++++|+||+++|++++|++.+|+.+|.+ .|+
T Consensus 90 ~~~~~~~T~~~~~id~~~~~---l~~~~aG~~~~~l~r~g~~~~l~~~~~~-----------------------lG~--- 140 (242)
T 3pu9_A 90 RDGKVSAALDILSVDLASRS---VLVTRNSEVPMLLGRNGEFEQISESGGR-----------------------IGI--- 140 (242)
T ss_dssp TTTCCCEEEEEEEEETTTTE---EEEEEESCCCEEEEETTEEEEECCCCCC-----------------------BSS---
T ss_pred cCCCcEEEEEEEEEECCCCE---EEEEeCCCCcEEEEECCEEEEeCCCCcc-----------------------ccc---
Confidence 23455555544333333 5689999999999999999999987643 221
Q ss_pred hhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccH-------HHHHHHHHHHhhhhcccccchHHHH
Q 008015 473 RMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISV-------KKAIQLVVQMREKYSADKENSTEKI 545 (581)
Q Consensus 473 RalGD~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~-------~ei~~iv~~~~~~~~~~~~~~~~~~ 545 (581)
...+.+. ...+...++|.|+||||||+|..+. +++..++.. ...+++++
T Consensus 141 ---------------~~~~~~~-~~~~~l~~Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~--------~~~~~~~~ 196 (242)
T 3pu9_A 141 ---------------YRHTRPR-VLEFPAEPGLTVILVSDGIIGAGGRRGQPLEFLATGGRVAG--------PETPAQAI 196 (242)
T ss_dssp ---------------CTTCCCE-EEEEECCTTCEEEEECHHHHTTTTTTTCCCCHHHHHHHHCC--------TTCCHHHH
T ss_pred ---------------cCCCCce-EEEEEeCCCCEEEEECcCcccCCCCccccccHHHHHHHHhc--------cCCCHHHH
Confidence 0111221 2245666899999999999987653 666443321 13579999
Q ss_pred HHHHhhhhhhcc---ccCCceEEEEecCCcc
Q 008015 546 ANVLLSEARTLR---TKDNTSIIFLDFDSTF 573 (581)
Q Consensus 546 A~~Lv~~A~~~g---s~DNiTvIVV~~~~~~ 573 (581)
++.|++.+...+ ..||+|++++++.+..
T Consensus 197 ~~~l~~~~~~~~~~~~~DDiTvlvv~~~~~~ 227 (242)
T 3pu9_A 197 ADELLEAALVADDGRAGDDMTVVVLRLRNVE 227 (242)
T ss_dssp HHHHHHHHHHHTTTSCSSCEEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCCCCeEEEEEEEecCC
Confidence 999999998765 6799999999996543
No 42
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.68 E-value=2.6e-17 Score=151.70 Aligned_cols=92 Identities=27% Similarity=0.394 Sum_probs=76.3
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccc----cccceeEEecCCCCceeeEEeccccccccc
Q 008015 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWNPNKLKWELVDMGSLNGTLL 250 (581)
Q Consensus 175 ~~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~----VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~v 250 (581)
...+.|. ..|+..+ .+.+.... .++|||.+.|||+|+|+. |||+||+|.+..+ +.|+|+||+|+|||||
T Consensus 15 ~~~w~L~-~~G~~~~-~~~l~~~~----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~-g~~~l~Dl~S~NGT~v 87 (145)
T 2csw_A 15 GRSWCLR-RVGMSAG-WLLLEDGC----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVWL 87 (145)
T ss_dssp SEEEEEC-CTTCSCC-BEECCTTC----CEEEESSTTSSEECCCSSCGGGSCTTCEEEEECTT-SCEEEEBSSCSSCEEE
T ss_pred CccEEEE-EeCCCCC-eEEeCCCC----cEEECCCCCCCEEECCCCcCCCCChhHeEEEEcCC-CeEEEEECCCCCCeEE
Confidence 3356666 7777765 45553331 699999999999999998 9999999999533 2799999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccCCCCeEEecc
Q 008015 251 NSQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (581)
Q Consensus 251 ng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~ 281 (581)
||+++.. +.++.|++||+|+||.
T Consensus 88 Ng~~i~~--------~~~~~L~~GD~I~iG~ 110 (145)
T 2csw_A 88 NRARLEP--------LRVYSIHQGDYIQLGV 110 (145)
T ss_dssp SSCBCCB--------TCCEECCSSCCEEESC
T ss_pred CCEECCC--------CccEECCCCCEEEECC
Confidence 9999984 5679999999999998
No 43
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.68 E-value=1e-16 Score=146.56 Aligned_cols=91 Identities=27% Similarity=0.402 Sum_probs=75.1
Q ss_pred ceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccc----cccceeEEecCCCCceeeEEecccccccccc
Q 008015 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWNPNKLKWELVDMGSLNGTLLN 251 (581)
Q Consensus 176 ~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~----VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vn 251 (581)
..|.|.. .|+..+ .+.+.... .++|||.+.|||+|+|+. |||+||+|.+..+ +.|+|+|++|+||||||
T Consensus 8 ~~w~l~~-~G~~~~-~~~l~~~~----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~-g~~~l~Dl~S~NGT~vN 80 (138)
T 2pie_A 8 RSWCLRR-VGMSAG-WLLLEDGC----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVWLN 80 (138)
T ss_dssp EEEEEEE-TTCSSC-BEEECTTC----CEEEESSSSSSEECCCSSCTTSSCSSCEEEEECTT-SCEEEEECSCSSCEEET
T ss_pred ccEEEEE-eCCCCC-EEEecCCC----eEEECCCCCCCEEeCCCCcCCCCChhHeEEEEcCC-CcEEEEECCCCCCeEEC
Confidence 3555443 466554 67776332 699999999999999998 9999999999433 27999999999999999
Q ss_pred cccCCCCCCCCCCCCCCcccCCCCeEEecc
Q 008015 252 SQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (581)
Q Consensus 252 g~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~ 281 (581)
|+++.. +.++.|.+||+|+||.
T Consensus 81 g~~l~~--------~~~~~L~~GD~I~lG~ 102 (138)
T 2pie_A 81 RARLEP--------LRVYSIHQGDYIQLGV 102 (138)
T ss_dssp TEECCT--------TCCEECCTTCEEEESC
T ss_pred CEEcCC--------CCcEECCCCCEEEECC
Confidence 999984 5679999999999998
No 44
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.63 E-value=3.3e-16 Score=144.96 Aligned_cols=91 Identities=20% Similarity=0.161 Sum_probs=76.8
Q ss_pred eEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccc---------cccceeEEecCCCC---ceeeEEeccc
Q 008015 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE---------VSGKHALINWNPNK---LKWELVDMGS 244 (581)
Q Consensus 177 ~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~---------VSr~Ha~I~~~~~~---~~~~l~DlgS 244 (581)
..+|..+.+.. ..+.|... .++|||.+.|||+|+++. |||+||+|.+..+. +.|+|+|+ |
T Consensus 30 w~~L~~~~~~~--~~i~L~~~-----~~~IGR~~~~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~-S 101 (149)
T 1gxc_A 30 WARLWALQDGF--ANLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDH-S 101 (149)
T ss_dssp CEEEEECSTTC--CCEEECSS-----EEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEEC-C
T ss_pred eEEEEEcCCCC--ceEEECCC-----CEEecCCCCCCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEEC-C
Confidence 45677776533 35788776 799999999999999985 99999999998752 37999996 9
Q ss_pred ccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccc
Q 008015 245 LNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (581)
Q Consensus 245 ~NGT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~ 283 (581)
+|||||||+++.. +.++.|++||+|+||...
T Consensus 102 tNGT~VNg~~i~~--------~~~~~L~~GD~I~lG~~~ 132 (149)
T 1gxc_A 102 GNGTFVNTELVGK--------GKRRPLNNNSEIALSLSR 132 (149)
T ss_dssp SSCEEETTEECCT--------TCEEECCTTEEEEESSTT
T ss_pred CCCeEECCEECCC--------CCeEECCCCCEEEECCCC
Confidence 9999999999984 567999999999999964
No 45
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.63 E-value=7.9e-16 Score=138.57 Aligned_cols=96 Identities=27% Similarity=0.284 Sum_probs=75.8
Q ss_pred eEEEEEeecCCCceeeeeecc------CCCCcceeecCcCCCcceeecc-ccccceeEEecC-CCCceeeEEeccccccc
Q 008015 177 CLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWN-PNKLKWELVDMGSLNGT 248 (581)
Q Consensus 177 ~~~L~v~~g~~~g~~~~l~~~------~~~~~~~~iGR~~~~di~l~d~-~VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT 248 (581)
..+|....|+.....+..... ......++|||.+.|||+|+|+ .|||+||+|.++ ++ .|+|+|+ |+|||
T Consensus 5 ~~~L~~~~~~~p~~~l~~~~~~i~~~~~~~~~~~~IGR~~~~di~l~~~~~vSr~Ha~i~~~~~g--~~~l~Dl-S~NGT 81 (127)
T 1g6g_A 5 VCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGEDG--NLLLNDI-STNGT 81 (127)
T ss_dssp EEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEECTTS--CEEEEEC-CSSCC
T ss_pred EEEEEECCCCCCceEeeccccceeeeeecCCCCEEECCCCCCCEEeCCCCCCChhHeEEEECCCC--cEEEEEC-CcCCe
Confidence 345666677665555544411 0011158999999999999997 699999999995 55 8999999 99999
Q ss_pred ccccccCCCCCCCCCCCCCCcccCCCCeEEecccc
Q 008015 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (581)
Q Consensus 249 ~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~ 283 (581)
||||+++.. +.++.|.+||+|+||.+.
T Consensus 82 ~vNg~~l~~--------~~~~~L~~Gd~I~lG~~~ 108 (127)
T 1g6g_A 82 WLNGQKVEK--------NSNQLLSQGDEITVGVGV 108 (127)
T ss_dssp EETTEECCT--------TCCEECCTTCEEEECTTS
T ss_pred EECCEEcCC--------CCeEEcCCCCEEEECCCc
Confidence 999999984 567999999999999875
No 46
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.58 E-value=6.7e-15 Score=147.45 Aligned_cols=194 Identities=16% Similarity=0.095 Sum_probs=113.5
Q ss_pred ccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhcccccc
Q 008015 320 EDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEGC 399 (581)
Q Consensus 320 ED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~~~~i~~~~~Gs 399 (581)
-|.|-+....++..+++|+||+|+...|.+++..+...+..++..... . .......+.+++..+|+.+.....++
T Consensus 52 GD~yd~~~~~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~-~----~~~~~~~p~~~l~~ln~~l~~~~~~~ 126 (255)
T 3f79_A 52 GDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRR-N----GTLPEFKPSEVLAHINRGLINTKLGK 126 (255)
T ss_dssp SEEEEEEEETTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTT-C----CC----CHHHHHHHHHHHHBTTBSSC
T ss_pred ceEEeEEEeCCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhcc-c----cccccCCHHHHHHHHHHHHHhcCCCC
Confidence 487744333345678999999998888888888777777665432110 0 00111223445555566655444444
Q ss_pred cEEEEEEEecCCcchhhcccccCC-ceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhhhhhhhh
Q 008015 400 TATVLLVWADGNANIFAQCANVGD-SACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLGDK 478 (581)
Q Consensus 400 Tatv~li~~~~~~~~~l~vaNVGD-SRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~~~~Rv~Gl~vtRalGD~ 478 (581)
.+|++++..+..+. .++++|+|+ ++.|++++|++.+++.+|.+ .|+
T Consensus 127 ~~T~~~~~id~~~~-~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~-----------------------lG~--------- 173 (255)
T 3f79_A 127 HVTMLGGVIDLEKN-SLTYSIGGHLPLPVLFVEGQAGYLEGRGLP-----------------------VGL--------- 173 (255)
T ss_dssp CEEEEEEEEETTTT-EEEEEECSCSCCCEEEC--CEEECCC----------------------------CC---------
T ss_pred EEEEEEEEEECCCC-EEEEEeCCCCCceEEEeCCeEEEeCCCCce-----------------------EEE---------
Confidence 44444444432221 156899999 56899999999888876643 221
Q ss_pred hhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHH-------HHHHHHHHhhhhcccccchHHHHHHHHhh
Q 008015 479 FLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKK-------AIQLVVQMREKYSADKENSTEKIANVLLS 551 (581)
Q Consensus 479 ~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~e-------i~~iv~~~~~~~~~~~~~~~~~~A~~Lv~ 551 (581)
.....+. ...+...++|.|+||||||+|.++.++ +.+++.+. ..+++.+++.|.
T Consensus 174 ---------~~~~~~~-~~~~~l~~gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~--------~~~~~~~~~~l~- 234 (255)
T 3f79_A 174 ---------FDDATYD-DRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA--------GGTLDGLRQVFG- 234 (255)
T ss_dssp ---------SSCCCCC-C---BCCSSEEEEEECSCCCCCSCC---CCTTTSSHHHHHHH--------SCSSHHHHHHC--
T ss_pred ---------cCCCceE-EEEEEECCCCEEEEECCCcCcccCCCcchhhHHHHHHHHHhc--------CCCHHHHHHHHH-
Confidence 0011111 124556689999999999999998777 77877653 235678888877
Q ss_pred hhhhccccCCceEEEEecC
Q 008015 552 EARTLRTKDNTSIIFLDFD 570 (581)
Q Consensus 552 ~A~~~gs~DNiTvIVV~~~ 570 (581)
.+...+..||+|+|+|+..
T Consensus 235 ~~~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 235 LANLAEMPDDIALLVLSRN 253 (255)
T ss_dssp ----CCSSSCEEEEEEEEC
T ss_pred hccCCCCCCCEEEEEEEec
Confidence 5677788999999999864
No 47
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.58 E-value=1.6e-15 Score=161.55 Aligned_cols=84 Identities=25% Similarity=0.382 Sum_probs=77.6
Q ss_pred CCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccccCCCCCCCCCCCC
Q 008015 187 SRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWG 266 (581)
Q Consensus 187 ~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~i~~p~~~~~~~g 266 (581)
..|..|.+... .++|||.++|||+|+|+.|||+||+|.+.++ .|+|+|+||+|||||||+++..
T Consensus 296 ~~g~~~~l~~~-----~~~iGR~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~i~~--------- 359 (388)
T 2ff4_A 296 ASGRGYPLQAA-----ATRIGRLHDNDIVLDSANVSRHHAVIVDTGT--NYVINDLRSSNGVHVQHERIRS--------- 359 (388)
T ss_dssp TTCCEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEECSS---------
T ss_pred CCCcEEEECCC-----CEEEecCCCCeEEECCCccChhHeEEEEECC--EEEEEECCCCCCeEECCEECCC---------
Confidence 45789999887 7999999999999999999999999999887 8999999999999999999963
Q ss_pred CCcccCCCCeEEecccceEEE
Q 008015 267 KPMELTSGDIITLGTTSSIHV 287 (581)
Q Consensus 267 ~~~~L~~Gd~i~lG~~~~~~v 287 (581)
++.|++||+|+||.+.+.|.
T Consensus 360 -~~~L~~gd~i~~G~~~~~~~ 379 (388)
T 2ff4_A 360 -AVTLNDGDHIRICDHEFTFQ 379 (388)
T ss_dssp -EEEECTTCEEEETTEEEEEE
T ss_pred -ceECCCCCEEEECCEEEEEE
Confidence 48999999999999888876
No 48
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.52 E-value=1.5e-14 Score=134.52 Aligned_cols=94 Identities=16% Similarity=0.218 Sum_probs=75.7
Q ss_pred EEEEe-ecCC-Cc-eeeeeeccCCCCcceeecCcC---CCcceeeccccccceeEEecCCCC--ceeeEEeccccccccc
Q 008015 179 SLEVV-SGPS-RG-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK--LKWELVDMGSLNGTLL 250 (581)
Q Consensus 179 ~L~v~-~g~~-~g-~~~~l~~~~~~~~~~~iGR~~---~~di~l~d~~VSr~Ha~I~~~~~~--~~~~l~DlgS~NGT~v 250 (581)
+|.-+ ..|. .+ ..|.|..+ .++|||.+ .|||+|+++.||++||.|.+..++ ..|++.|++|+|||||
T Consensus 40 hLvnLn~Dp~ls~~lvy~L~~g-----~t~IGR~~~~~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~V 114 (154)
T 4ejq_A 40 HLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYV 114 (154)
T ss_dssp EEEECCCCTTCSSEEEEECCSE-----EEEEECSSCSSCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEEE
T ss_pred eEEEecCCcccCceEEEEeCCC-----CEEEcCCCCCCCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceEE
Confidence 45544 4443 23 45668777 79999975 799999999999999999998753 3588999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccCCCCeEEecccc-eEEE
Q 008015 251 NSQPINHPDSGSRHWGKPMELTSGDIITLGTTS-SIHV 287 (581)
Q Consensus 251 ng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~-~~~v 287 (581)
||++|.. ++.|++||.|.||.+. |+|.
T Consensus 115 NG~~i~~----------~~~L~~GD~I~~G~~~~Frf~ 142 (154)
T 4ejq_A 115 NGKKVTE----------PSILRSGNRIIMGKSHVFRFN 142 (154)
T ss_dssp TTEECCS----------CEECCTTCEEEETTTEEEEEE
T ss_pred CCEEcCC----------ceECCCCCEEEECCcEEEEEc
Confidence 9999985 4899999999999875 3443
No 49
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.50 E-value=4e-14 Score=124.93 Aligned_cols=95 Identities=20% Similarity=0.288 Sum_probs=87.7
Q ss_pred ceEEEEEeecCCCceeeeeeccCCCCcceeecCcC-CCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 176 ~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~-~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
..+.|.++.|+..|..++|..+ .++||..+ .|||+|.|+.||++||+|....+ +|+|. +|.||||+||++
T Consensus 3 ~~~klrvlsG~~~G~~l~L~~~-----~~~IGs~~~~~DLvL~D~~Vs~~H~~L~~~~~--g~~L~--~s~ngt~vdG~~ 73 (123)
T 4a0e_A 3 GSWVCRFYQGKHRGVEVELPHG-----RCVFGSDPLQSDIVLSDSEIAPVHLVLMVDEE--GIRLT--DSAEPLLQEGLP 73 (123)
T ss_dssp CCEEEEECSGGGTTCEEEECSE-----EEEEESCTTTCSEECCCTTSCSSCEEEEEETT--EEEEE--EESSCCEETTEE
T ss_pred ceEEEEEecCCCCCcEEEcCCC-----cEEECCCCCCCCEEEeCCCccceeEEEEECCC--eEEEE--eccCCEEECCEE
Confidence 4688999999999999999988 79999999 99999999999999999999999 99997 899999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEEE
Q 008015 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v~v 289 (581)
+.. ...|.+|+.|.+|.+.+.|...
T Consensus 74 v~~----------~~~L~~g~~l~lG~~~l~~~~~ 98 (123)
T 4a0e_A 74 VPL----------GTLLRAGSCLEVGFLLWTFVAV 98 (123)
T ss_dssp CCT----------TCBCCTTSCEEETTEEEEEEET
T ss_pred ccc----------ccccCCCCEEEEccEEEEEEcC
Confidence 875 1399999999999999888753
No 50
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.50 E-value=9.9e-14 Score=133.54 Aligned_cols=177 Identities=16% Similarity=0.191 Sum_probs=117.8
Q ss_pred cCCCccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhcc
Q 008015 316 KLPMEDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH 395 (581)
Q Consensus 316 R~~nED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~~~~i~~~ 395 (581)
+..+.|.|.+.. .++..+++|+||+|....|..++..+...+.+.. ...+.++| ..+|+.+..
T Consensus 16 ~~v~GD~y~~~~-~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~-----------~~~p~~il----~~ln~~l~~- 78 (193)
T 3zt9_A 16 EIACGDACLVKR-VEGVIFLAVGDGIGHGPEAARAAEIAIASMESSM-----------NTGLVNIF----QLCHRELRG- 78 (193)
T ss_dssp CSSCSEEEEEEE-ETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT-----------TSCHHHHH----HHHHHHHTT-
T ss_pred CCCCCCeEEEEE-eCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc-----------cCCHHHHH----HHHHHHHhc-
Confidence 345679887653 4567789999999977777777777766665421 12233333 334444433
Q ss_pred cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhhhhh
Q 008015 396 YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARML 475 (581)
Q Consensus 396 ~~GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~~~~Rv~Gl~vtRal 475 (581)
..|+|++++.+.....+ +.++|+|+++.|++++++...+...+ + +.|..
T Consensus 79 ~~~~t~~~~~id~~~~~---l~~~~aGh~~~~l~~~~~~~~l~~~~---------------g--------~lG~~----- 127 (193)
T 3zt9_A 79 TRGAVAALCRVDRRQGL---WQAAIVGNIHVKILSAKGIITPLATP---------------G--------ILGYN----- 127 (193)
T ss_dssp SSCEEEEEEEEETTTTE---EEEEEESSCEEEEEETTEEECCCCBC---------------C--------BBTTB-----
T ss_pred cCceEEEEEEEECCCCE---EEEEecCCceEEEEcCCcEEEecCCC---------------C--------ceecc-----
Confidence 34677666665443333 56899999999999998765543211 1 11110
Q ss_pred hhhhhhccccccCCCC-CccceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhh
Q 008015 476 GDKFLKQQDARFSAEP-YISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEAR 554 (581)
Q Consensus 476 GD~~~K~~~~~vs~eP-~I~~~~~i~~~~~d~lVLaSDGlwD~ls~~ei~~iv~~~~~~~~~~~~~~~~~~A~~Lv~~A~ 554 (581)
.+ .+. ...+...+++.|+|+||||+|.++.+++..++ ..+++++|+.|++.|.
T Consensus 128 --------------~~~~~~-~~~~~l~~gd~l~l~sDGl~e~~~~~~~~~~~-----------~~~~~~~a~~l~~~~~ 181 (193)
T 3zt9_A 128 --------------YPHQLL-IAKGSYQEGDLFLIHSDGIQEGAVPLALLANY-----------RLTAEELVRLIGEKYG 181 (193)
T ss_dssp --------------CCSSCC-CEEEECCTTCEEEEECTTSCTTCSCGGGGGCT-----------TSCHHHHHHHHHHHHC
T ss_pred --------------CCccce-eEEeccCCCCEEEEECCCCCCccChhhhhchh-----------cCCHHHHHHHHHHHhC
Confidence 11 111 12456668999999999999999998876543 3579999999999973
Q ss_pred hccccCCceEEEEe
Q 008015 555 TLRTKDNTSIIFLD 568 (581)
Q Consensus 555 ~~gs~DNiTvIVV~ 568 (581)
+..||+||+|++
T Consensus 182 --~~~Dd~tvlv~r 193 (193)
T 3zt9_A 182 --RRDDDVAVIVAR 193 (193)
T ss_dssp --CTTSCEEEEEEC
T ss_pred --cCCCCeEEEEEC
Confidence 479999999985
No 51
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.49 E-value=5.2e-14 Score=125.77 Aligned_cols=90 Identities=17% Similarity=0.223 Sum_probs=71.9
Q ss_pred eEEEEEeecC-CC-c-eeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccc
Q 008015 177 CLSLEVVSGP-SR-G-IRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (581)
Q Consensus 177 ~~~L~v~~g~-~~-g-~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~ 253 (581)
..+|..+.+. .. + ..+.|.. ..+|||.++|||+|+++.||++||+|.+..+ +.|+|+|++ +|||||||+
T Consensus 26 ~PhLvnLn~Dp~~s~~l~y~L~~------~t~IGR~~~~DI~L~~~~Vs~~Ha~I~~~~~-g~~~l~dl~-~ngt~VNG~ 97 (124)
T 3fm8_A 26 KCFLVNLNADPALNELLVYYLKE------HTLIGSANSQDIQLCGMGILPEHCIIDITSE-GQVMLTPQK-NTRTFVNGS 97 (124)
T ss_dssp -CEEEETTCCTTSSCCCEEECCS------EEEEESSTTCSEECCSTTCCSSCEEEEECTT-SCEEEEECT-TCCEEETTE
T ss_pred ccEEEEeCCCCccCceEEEECCC------CeEECCCCCCCEEECCCCeecceEEEEECCC-CeEEEEECC-CCCEEECCE
Confidence 4467777543 32 2 3455654 3799999999999999999999999998533 279999996 799999999
Q ss_pred cCCCCCCCCCCCCCCcccCCCCeEEecccce
Q 008015 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (581)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~ 284 (581)
+|.. ++.|++||+|.||.+.+
T Consensus 98 ~V~~----------~~~L~~GD~I~lG~~~~ 118 (124)
T 3fm8_A 98 SVSS----------PIQLHHGDRILWGNNHF 118 (124)
T ss_dssp ECCS----------CEEECTTCEEEETTTEE
T ss_pred EcCC----------cEECCCCCEEEECCCeE
Confidence 9985 48999999999997653
No 52
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.39 E-value=3.3e-13 Score=136.62 Aligned_cols=96 Identities=17% Similarity=0.181 Sum_probs=75.9
Q ss_pred EEEEEeecCCCceeeeeeccCCCCcceeecCcCCCc---ceeeccccccceeEEecCCC---------CceeeEEecccc
Q 008015 178 LSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSD---VLLKDSEVSGKHALINWNPN---------KLKWELVDMGSL 245 (581)
Q Consensus 178 ~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~d---i~l~d~~VSr~Ha~I~~~~~---------~~~~~l~DlgS~ 245 (581)
|.|+...+...|+++.|..+ .++|||...++ |+++|++|||+||+|.+..- ...++|+||||+
T Consensus 2 WiL~~~~d~~~Gkr~~L~pg-----~YlIGR~~~~~~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLgSk 76 (325)
T 3huf_A 2 WIIEAEGDILKGKSRILFPG-----TYIVGRNVSDDSSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLDTK 76 (325)
T ss_dssp EEEEESTTTTTTCCEEECSE-----EEEEESSCCCBTTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECSCS
T ss_pred cEEeccCccCCCeEEEecCC-----eEEECCCCCccCceeecCCCCccccceEEEEecccccccccCCcceEEEEECCCC
Confidence 45665333457899999988 69999997643 68899999999999998631 136999999999
Q ss_pred cccccccccCCCCCCCCCCCCCCccc-CCCCeEEecccceEEE
Q 008015 246 NGTLLNSQPINHPDSGSRHWGKPMEL-TSGDIITLGTTSSIHV 287 (581)
Q Consensus 246 NGT~vng~~i~~p~~~~~~~g~~~~L-~~Gd~i~lG~~~~~~v 287 (581)
|||||||+++.. ....| .+||.|++|.+...|.
T Consensus 77 nGTfVNGerI~~---------~~~~L~~dgd~I~fG~~~~~fR 110 (325)
T 3huf_A 77 FGTKVNEKVVGQ---------NGDSYKEKDLKIQLGKCPFTIN 110 (325)
T ss_dssp SCEEETTEECCT---------TCEEECSSEEEEEETTCSSCEE
T ss_pred CCEEECCEECCC---------ceeeecCCCCEEEecCCcceEE
Confidence 999999999973 23455 5799999999876544
No 53
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.19 E-value=9.1e-12 Score=104.94 Aligned_cols=76 Identities=13% Similarity=0.165 Sum_probs=62.4
Q ss_pred eeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccc-ccccccCCCCCCCCCCCCCCcc
Q 008015 192 CSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPME 270 (581)
Q Consensus 192 ~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT-~vng~~i~~p~~~~~~~g~~~~ 270 (581)
..|+... -++|||.+.++++|+|+.||+.||.|....+ +.++. . |+||| ||||+++ . +..
T Consensus 15 v~l~~~~----~~rIGR~~~~~l~LddpsVs~~HAti~~~~~--G~~~l-~-S~nGtVFVNGqrv-~----------~~~ 75 (102)
T 3uv0_A 15 ILLKADT----IYRIGRQKGLEISIADESMELAHATACILRR--GVVRL-A-ALVGKIFVNDQEE-T----------VVD 75 (102)
T ss_dssp EECCTTC----CEEEESSTTSTEECCCTTSCTTCEEEEEEET--TEEEE-E-ESSSCEEETTEEE-S----------EEE
T ss_pred EEeecCc----EEEEcCCCCCcEEECCcccccceEEEEecCC--ceEEE-E-eccCcEEECCEEe-e----------eEE
Confidence 3455543 5999999999999999999999999999887 55553 3 99995 9999999 4 389
Q ss_pred cCCCCe------EEecccceEE
Q 008015 271 LTSGDI------ITLGTTSSIH 286 (581)
Q Consensus 271 L~~Gd~------i~lG~~~~~~ 286 (581)
|..||. ++||..+-.+
T Consensus 76 I~~gDtI~g~v~lrFGnvea~l 97 (102)
T 3uv0_A 76 IGMENAVAGKVKLRFGNVEARL 97 (102)
T ss_dssp ECGGGCBTTEEEEEETTEEEEE
T ss_pred ccCCcccccEEEEEecCEEEEE
Confidence 999999 8888776544
No 54
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.02 E-value=3.5e-10 Score=121.05 Aligned_cols=95 Identities=19% Similarity=0.155 Sum_probs=76.2
Q ss_pred ceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeecccc---------ccceeEEecCCCC---ceeeEEecc
Q 008015 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEV---------SGKHALINWNPNK---LKWELVDMG 243 (581)
Q Consensus 176 ~~~~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~V---------Sr~Ha~I~~~~~~---~~~~l~Dlg 243 (581)
+..+|.++.+... .+.+..+ .++|||.+.||++++|+.| ||+||+|.+..+. ..|+|+| +
T Consensus 9 ~~g~l~~~~~~~~--~~~l~~~-----~~~iGR~~~~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~D-~ 80 (419)
T 3i6u_A 9 PWARLWALQDGFA--NLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED-H 80 (419)
T ss_dssp CSEEEEECSSSSC--CEEECSS-----EEEEESSTTSSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEEE-C
T ss_pred CceEeeecCCCCC--ceEecCC-----CEEecCCCccCEEECCcccccccccccccccceEEEEEcCCCCceEEEEEE-C
Confidence 3556776665333 6778776 7999999999999999876 9999999876432 2399999 8
Q ss_pred cccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEE
Q 008015 244 SLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (581)
Q Consensus 244 S~NGT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~ 286 (581)
|+|||||||+.+.. +...+|.+||.+++|.+....
T Consensus 81 S~nGt~vn~~~~~~--------~~~~~l~~~d~i~~~~~~~~~ 115 (419)
T 3i6u_A 81 SGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSRNKV 115 (419)
T ss_dssp CSSCEEETTEECCT--------TCEEECCTTEEEEESSTTCEE
T ss_pred CcCCceECcccccC--------CCcccCCCCCEeeeeccccce
Confidence 99999999999874 455789999999999887543
No 55
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.01 E-value=1.4e-09 Score=93.24 Aligned_cols=92 Identities=16% Similarity=0.212 Sum_probs=73.3
Q ss_pred EEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccccCCCC
Q 008015 179 SLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHP 258 (581)
Q Consensus 179 ~L~v~~g~~~g~~~~l~~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~i~~p 258 (581)
+|.-.++. ...+.|..+. .++|||++.+.| .|..+||+|++|..+.+++.|.|.|+| +|++++||+++..
T Consensus 6 ~L~~~~~~--~~~I~L~~g~----~v~iGR~p~t~I--~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng~~l~k- 75 (102)
T 3kt9_A 6 WLVRQDSR--HQRIRLPHLE----AVVIGRGPETKI--TDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDSVVIGK- 75 (102)
T ss_dssp EEEETTST--TCEEECCBTC----EEEECSSTTTCC--CCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEECCB-
T ss_pred EEEecCCC--CCcEEcCCCC----cEEeccCCcccc--ccCcccCcceEEEEecCCCEEEEEECc-CCCCeECCEEcCC-
Confidence 34444442 3567777763 578999997755 799999999999999766688999997 8999999999885
Q ss_pred CCCCCCCCCCcccCCCCeEEecccceEEE
Q 008015 259 DSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (581)
Q Consensus 259 ~~~~~~~g~~~~L~~Gd~i~lG~~~~~~v 287 (581)
+..+.|.+||+|.+-.-.+.|.
T Consensus 76 -------~~~~~L~~GD~l~Ll~~~~~~~ 97 (102)
T 3kt9_A 76 -------DQEVKLQPGQVLHMVNELYPYI 97 (102)
T ss_dssp -------TCEEEECTTCCEEEETTEEEEE
T ss_pred -------CCeEEeCCCCEEEEccCCceEE
Confidence 6779999999999876655554
No 56
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=98.88 E-value=3.8e-09 Score=91.53 Aligned_cols=92 Identities=22% Similarity=0.246 Sum_probs=71.7
Q ss_pred eEEEEEeecCCCceeeeee--ccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 177 CLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 177 ~~~L~v~~g~~~g~~~~l~--~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
..+|+-.+|... .+.|. .+ .++|||++ +..|.|..+||+|++|.++..++.+.|.|+| +|++++||.+
T Consensus 9 ~c~L~~~~~~~~--~I~Lp~~~g-----~~viGR~p--~t~I~DkrcSR~hv~L~ad~~~~~v~vk~lG-~Np~~vng~~ 78 (110)
T 2brf_A 9 RLWLESPPGEAP--PIFLPSDGQ-----ALVLGRGP--LTQVTDRKCSRTQVELVADPETRTVAVKQLG-VNPSTTGTQE 78 (110)
T ss_dssp EEEEECSTTSSC--CEECCSTTC-----CEEECSBT--TTTBCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEEC-CB
T ss_pred EEEEEeCCCCCC--cEEeccCCC-----CEEEcCCC--CcccccccceeeeEEEEEecCCCEEEEEEcc-cCCcEECCEE
Confidence 445666666433 67774 34 79999998 5568999999999999988777789999996 5999999998
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEe--cccceEE
Q 008015 255 INHPDSGSRHWGKPMELTSGDIITL--GTTSSIH 286 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~l--G~~~~~~ 286 (581)
+.. +..+.|++||.|.| |.+.+.+
T Consensus 79 l~k--------~~~~~L~~GD~leLl~g~y~~~v 104 (110)
T 2brf_A 79 LKP--------GLEGSLGVGDTLYLVNGLHPLTL 104 (110)
T ss_dssp CCT--------TCEEEEETTCEEEEETTEEEEEE
T ss_pred cCC--------CCEEEecCCCEEEEccCCeEEEE
Confidence 885 67899999999987 4444443
No 57
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=98.77 E-value=1.4e-07 Score=100.52 Aligned_cols=194 Identities=11% Similarity=0.013 Sum_probs=107.9
Q ss_pred ccceeeccCCCCCceeeeccCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhcc--cc
Q 008015 320 EDVCYYHWPLPGFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH--YE 397 (581)
Q Consensus 320 ED~~~~~~~~~~~~lfgV~DGhGG~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~~~~i~~~--~~ 397 (581)
=|.|.+.. .++..+++|+|++|..-.|.+++..+...+..+.... ..+.++|.. +|..+... ..
T Consensus 53 GD~y~~~~-~~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~---------~~p~~il~~----ln~~~~~~~~~~ 118 (399)
T 3ke6_A 53 GDWFDALA-LGDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAG---------YTVVEALEA----VDRFHKQVPGSK 118 (399)
T ss_dssp SEEEEEEE-CSSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTT---------CCHHHHHHH----HHHHGGGSTTCT
T ss_pred CceEEEEE-ECCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcC---------CCHHHHHHH----HHHHHHhcCCCc
Confidence 37775442 3346788999999954444455555555555543321 123333322 22222222 23
Q ss_pred cccEEEEEEEecCCcchhhcccccCCceeEEee-cCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhhhhhh
Q 008015 398 GCTATVLLVWADGNANIFAQCANVGDSACVMNV-DGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLG 476 (581)
Q Consensus 398 GsTatv~li~~~~~~~~~l~vaNVGDSRayl~r-~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~~~~Rv~Gl~vtRalG 476 (581)
++|++++.+...... +.++|+|..+.|+++ +|++..+..++.+ ..|+
T Consensus 119 ~~t~~~~~id~~~~~---l~~~~aGh~~~~l~~~~g~~~~l~~~~~~----------------------plG~------- 166 (399)
T 3ke6_A 119 SATMCVGSLDFTSGE---FQYCTAGHPPPLLVTADASARYVEPTGAG----------------------PLGS------- 166 (399)
T ss_dssp TCEEEEEEEETTTCE---EEEEEESSCCCEEECTTSCEEECCCCSCC----------------------CTTS-------
T ss_pred EEEEEEEEEECCCCE---EEEECCCCChhEEEeCCCCEEEeecCCCc----------------------ceEC-------
Confidence 445544444333333 568999999999998 6777766654311 1111
Q ss_pred hhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccH------HHHHHHHHHHhhhh----cccccchHHHHH
Q 008015 477 DKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISV------KKAIQLVVQMREKY----SADKENSTEKIA 546 (581)
Q Consensus 477 D~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~------~ei~~iv~~~~~~~----~~~~~~~~~~~A 546 (581)
.+.+. ...+...++|.|+|+||||.|.... +.+.+++.+..... ...+....+.++
T Consensus 167 -------------~~~~~-~~~~~l~~Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~ 232 (399)
T 3ke6_A 167 -------------GTGFP-VRSEVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLC 232 (399)
T ss_dssp -------------SCCCC-CEEEECCTTCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------CCHHHHHH
T ss_pred -------------CCCce-eEEEEECCCCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccChhhHHHHHH
Confidence 01111 1245566899999999999998765 44555554421100 001123345555
Q ss_pred HHHhhhhhh-ccccCCceEEEEecCCcc
Q 008015 547 NVLLSEART-LRTKDNTSIIFLDFDSTF 573 (581)
Q Consensus 547 ~~Lv~~A~~-~gs~DNiTvIVV~~~~~~ 573 (581)
+.+++.... .+..||+||+++++...+
T Consensus 233 ~~~~~~~~~~~~~~DDitvl~vr~~~~~ 260 (399)
T 3ke6_A 233 SDTLELLLRSTGYNDDVTLLAMQRRAPT 260 (399)
T ss_dssp HHHHHHHHHTTCCSSCEEEEEEEECCCC
T ss_pred HHHHHHhccCCCCCCceEEEEEEeeCCC
Confidence 555554332 457899999999998643
No 58
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.71 E-value=9.3e-09 Score=102.05 Aligned_cols=71 Identities=14% Similarity=0.054 Sum_probs=60.9
Q ss_pred ceeecCcCCCcceeeccccccceeEEecCC-CC-ceeeEEeccccccc-ccccccCCCCCCCCCCCCCCcccC-CCCeEE
Q 008015 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNP-NK-LKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPMELT-SGDIIT 278 (581)
Q Consensus 203 ~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~-~~-~~~~l~DlgS~NGT-~vng~~i~~p~~~~~~~g~~~~L~-~Gd~i~ 278 (581)
.++|||.+.|||+|++. + ||.+.... +. +.|+|+|++|+||| ||||+++.. +..|+ .||.|.
T Consensus 93 ~itIG~~~~~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~~i~~----------~~~L~~~GD~I~ 158 (238)
T 1wv3_A 93 TMTIGPNAYDDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQ----------LTNKAYIGDHIY 158 (238)
T ss_dssp EEEEESSTTSSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTEECCS----------SEEEEETTCEEE
T ss_pred eEEEeCCCCCeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCEEecc----------ceeccCCcCEEE
Confidence 69999999999999988 3 58777771 10 27999999999997 999999985 37899 999999
Q ss_pred ecccceEEE
Q 008015 279 LGTTSSIHV 287 (581)
Q Consensus 279 lG~~~~~~v 287 (581)
+|...+.+.
T Consensus 159 ig~~~~~~~ 167 (238)
T 1wv3_A 159 VEGIWLEVQ 167 (238)
T ss_dssp ETTEEEEEC
T ss_pred ECCEEEEEE
Confidence 999988876
No 59
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.70 E-value=2e-08 Score=88.14 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=73.1
Q ss_pred ceEEEEEeecCCCceeeeee--ccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccc
Q 008015 176 SCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (581)
Q Consensus 176 ~~~~L~v~~g~~~g~~~~l~--~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~ 253 (581)
...+|+-+++... .+.|. .+ +++|||++ +..|.|..+||+|+++.++..++.+.|.++|+ |++++||.
T Consensus 15 ~~c~L~~~~~~~~--~I~Lp~~~g-----~~viGRgp--~t~I~DkrcSR~qv~L~ad~~~~~v~vk~lG~-NP~~vng~ 84 (119)
T 1ujx_A 15 GRLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGP--LTQVTDRKCSRNQVELIADPESRTVAVKQLGV-NPSTVGVQ 84 (119)
T ss_dssp CCEEEECCSSSCC--CCCCCTTSC-----CEEESBBT--TTTBCCTTSCTTSEEEEEETTTTEEEEEECSS-SCCBSSSS
T ss_pred ceEEEEeCCCCCC--cEEeccCCC-----CEEEcCCC--CcccccccccceeEEEEEecCCCEEEEEEccc-CCcEECCE
Confidence 3556777776533 56664 34 79999998 55789999999999999887777899999975 99999999
Q ss_pred cCCCCCCCCCCCCCCcccCCCCeEEe--cccceEE
Q 008015 254 PINHPDSGSRHWGKPMELTSGDIITL--GTTSSIH 286 (581)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~Gd~i~l--G~~~~~~ 286 (581)
++.. +..+.|.+||.|.| |.+.+.+
T Consensus 85 ~l~k--------~~~~~L~~GD~l~Ll~g~y~~~v 111 (119)
T 1ujx_A 85 ELKP--------GLSGSLSLGDVLYLVNGLYPLTL 111 (119)
T ss_dssp BCCT--------TCEEEEETTCCCBCBTTBSCCEE
T ss_pred EecC--------CCEEEecCCCEEEEecCCeEEEE
Confidence 8885 67799999999874 4444443
No 60
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.70 E-value=2.6e-08 Score=94.91 Aligned_cols=91 Identities=18% Similarity=0.255 Sum_probs=70.3
Q ss_pred EEEEEe-ecCC-Cc-eeeeeeccCCCCcceeecCcC---CCcceeeccccccceeEEecCCCC---ceeeEEeccccccc
Q 008015 178 LSLEVV-SGPS-RG-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK---LKWELVDMGSLNGT 248 (581)
Q Consensus 178 ~~L~v~-~g~~-~g-~~~~l~~~~~~~~~~~iGR~~---~~di~l~d~~VSr~Ha~I~~~~~~---~~~~l~DlgS~NGT 248 (581)
.+|.-+ ..|. .+ ..|.|..+ ..+|||.. .+||+|..+.|+++||.|..+.++ +.++|.++ +.+.|
T Consensus 69 PhLvnLn~Dp~ls~~l~y~L~~g-----~t~VGr~~~~~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t 142 (184)
T 4egx_A 69 PHLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADT 142 (184)
T ss_dssp CEEEECCCCTTCSSCSEEECCSE-----EEEEECSSSSSCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCE
T ss_pred ceEEeccCCcccCceEEEEECCC-----cCcCCCCCcCCCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeE
Confidence 345555 3443 23 46668777 78999964 689999999999999999987642 24667776 56789
Q ss_pred ccccccCCCCCCCCCCCCCCcccCCCCeEEecccce
Q 008015 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (581)
Q Consensus 249 ~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~ 284 (581)
||||++|.. ++.|++||.|.||.+.+
T Consensus 143 ~VNG~~I~~----------~~~L~~GDrI~lG~~h~ 168 (184)
T 4egx_A 143 YVNGKKVTE----------PSILRSGNRIIMGKSHV 168 (184)
T ss_dssp EETTEECCS----------CEECCTTCEEEETTTEE
T ss_pred EEcCEEccc----------cEEcCCCCEEEECCCCE
Confidence 999999985 49999999999998753
No 61
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.67 E-value=4.4e-08 Score=87.91 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=74.2
Q ss_pred eEEEEEeecCCCceeeeee--ccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 008015 177 CLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (581)
Q Consensus 177 ~~~L~v~~g~~~g~~~~l~--~~~~~~~~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (581)
..+|+-+.|... .+.|. .+ .++|||++ +..|.|..+||+|++|.++..++.+.|.++| +|+++|||.+
T Consensus 9 ~c~L~p~d~~~~--~I~Lp~~~g-----~vvIGRgP--et~ItDkRcSR~qv~L~ad~~~g~V~Vk~lG-~NP~~vng~~ 78 (143)
T 1yj5_C 9 RLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGP--LTQVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVGVHE 78 (143)
T ss_dssp EEEEECCTTSCC--CEECCTTTC-----EEEECSBT--TTTBCCSSSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEE
T ss_pred eEEEEecCCCCC--cEEeccCCC-----CEEEcCCC--ccccccccccceeEEEEEecCCCeEEEEEcc-cCCcEECCEE
Confidence 456777776533 67774 34 79999998 6679999999999999988776789999996 5999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEE--ecccceEEE
Q 008015 255 INHPDSGSRHWGKPMELTSGDIIT--LGTTSSIHV 287 (581)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~Gd~i~--lG~~~~~~v 287 (581)
+.. +..+.|.+||.|. .|.+.+.++
T Consensus 79 L~k--------~~~~~L~~GD~LeLl~g~y~f~V~ 105 (143)
T 1yj5_C 79 LKP--------GLSGSLSLGDVLYLVNGLYPLTLR 105 (143)
T ss_dssp CCT--------TCEEEECTTCEEESSSSCSEEEEE
T ss_pred ecC--------CCEEEecCCCEEEEecCCceEEEE
Confidence 885 6779999999998 455555544
No 62
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.14 E-value=8.2e-06 Score=86.14 Aligned_cols=191 Identities=18% Similarity=0.155 Sum_probs=90.1
Q ss_pred cceeeccCCCCCceeeeccCCC-cchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhccccc-
Q 008015 321 DVCYYHWPLPGFGLFGICDGHG-GSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEG- 398 (581)
Q Consensus 321 D~~~~~~~~~~~~lfgV~DGhG-G~~~~~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~~~~i~~~~~G- 398 (581)
|.|-+..-.++..+++|+|+.| |-.+|- .+..+...+...+...... ......++.+++ ..+|..+.....+
T Consensus 192 D~yd~~~~~~~~~~~~i~Dv~GhGv~aa~-~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~l----~~ln~~l~~~~~~~ 265 (394)
T 3eq2_A 192 DFVDYFRVDERRVAFYLADVSGHGASSAF-VTVLLKFMTTRLLYESRRN-GTLPEFKPSEVL----AHINRGLINTKLGK 265 (394)
T ss_dssp CEEECCEETTTEEEEEEEEESSCSTTTHH-HHHHHHHHHHHHHHHSCSS-CSSSSCCHHHHH----HHHHHHHHHTTCCC
T ss_pred cEEeEEEeCCCcEEEEEEECCCCChHHHH-HHHHHHHHHHHHHHhhhcc-CCcccCCHHHHH----HHHHHHHhccCcCc
Confidence 7664432234466789999988 555543 3333334443333221100 000011223332 2333333333333
Q ss_pred -ccEEEEEEEecCCcchhhcccccCCce-eEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhhhhhh
Q 008015 399 -CTATVLLVWADGNANIFAQCANVGDSA-CVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLG 476 (581)
Q Consensus 399 -sTatv~li~~~~~~~~~l~vaNVGDSR-ayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~i~~~~~Rv~Gl~vtRalG 476 (581)
+|++++.+....+. +.++|.|-.. .++.++|++..|..... ..|+
T Consensus 266 ~~t~~~~~~d~~~~~---l~~~~aGh~p~~~~~~~g~~~~l~~~~~-----------------------plG~------- 312 (394)
T 3eq2_A 266 HVTMLGGVIDLEKNS---LTYSIGGHLPLPVLFVEGQAGYLEGRGL-----------------------PVGL------- 312 (394)
T ss_dssp CEEEEEEEEETTTTE---EEEEECSSSCCCEEEETTEEEECCCC-------------------------CCSC-------
T ss_pred EEEEEEEEEECCCCE---EEEEcCCCCCCcEEecCCceEecCCCCc-----------------------eeEe-------
Confidence 44444444333332 5579999854 67777877666543221 1221
Q ss_pred hhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccH-------HHHHHHHHHHhhhhcccccchHHHHHHHH
Q 008015 477 DKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISV-------KKAIQLVVQMREKYSADKENSTEKIANVL 549 (581)
Q Consensus 477 D~~~K~~~~~vs~eP~I~~~~~i~~~~~d~lVLaSDGlwD~ls~-------~ei~~iv~~~~~~~~~~~~~~~~~~A~~L 549 (581)
....... ...+...+++.|+|.||||.|.... +.+.+++... ...++.+++.+
T Consensus 313 -----------~~~~~~~-~~~~~l~~gd~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~--------~~~~~~l~~~~ 372 (394)
T 3eq2_A 313 -----------FDDATYD-DRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA--------GGTLDGLRQVF 372 (394)
T ss_dssp -----------CCCC--C-CEEEECCSSCEEEECSSCCCC-----CCSTTTTTSHHHHHTT--------C--CHHHHHHH
T ss_pred -----------cCCCceE-EEEEEeCCCCEEEEECCCcccccCcccchhhHHHHHHHHHhc--------chhHHHHHHHh
Confidence 0011111 2246667899999999999998543 3444554331 22344444444
Q ss_pred hhhhhhccccCCceEEEEecCC
Q 008015 550 LSEARTLRTKDNTSIIFLDFDS 571 (581)
Q Consensus 550 v~~A~~~gs~DNiTvIVV~~~~ 571 (581)
.. .......||+|+++++...
T Consensus 373 ~~-~~~~~~~DDit~l~i~~~~ 393 (394)
T 3eq2_A 373 GL-ANLAEMPDDIALLVLSRNL 393 (394)
T ss_dssp SC-CCSCC--CCCEEEEEC---
T ss_pred cc-cCCCCCCCceEEEEEeccc
Confidence 33 2223457999999998653
No 63
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=30.80 E-value=29 Score=27.16 Aligned_cols=32 Identities=6% Similarity=0.114 Sum_probs=23.4
Q ss_pred cccccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEE
Q 008015 246 NGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (581)
Q Consensus 246 NGT~vng~~i~~p~~~~~~~g~~~~L~~Gd~i~lG~~~~~~ 286 (581)
+..+|||+.+..| ...+.+||.|+++...+.+
T Consensus 46 G~V~VNG~~v~~~---------~~~v~~gd~I~v~~~~~~~ 77 (79)
T 1p9k_A 46 GQVKVDGAVETRK---------RCKIVAGQTVSFAGHSVQV 77 (79)
T ss_dssp HHHEETTBCCCCS---------SCCCCSSEEEEETTEEEEE
T ss_pred CEEEECCEEecCC---------CCCCCCCCEEEECCEEEEE
Confidence 4577899887643 2678899999998776543
No 64
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=31.68 E-value=14 Score=25.27 Aligned_cols=20 Identities=35% Similarity=0.632 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 008015 10 FTVLLMLILILLFIFIACKP 29 (581)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~ 29 (581)
++.++++.||++++.+--||
T Consensus 17 l~vi~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 17 LVVLTIISLIILIMLWQKKP 36 (39)
Confidence 34444444444444444444
No 65
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=25.63 E-value=59 Score=31.26 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=28.6
Q ss_pred ceeecCcCCCcceeeccccccceeEEecCCCCceeeE
Q 008015 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239 (581)
Q Consensus 203 ~~~iGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l 239 (581)
.++||+...|+|.|++. ..|++|.++++ +.|.+
T Consensus 22 ~~tiG~~~~~~itl~~~---~~~i~l~~~~~-~~~~v 54 (238)
T 1wv3_A 22 TYTISEDERADITLKSL---GEVIHLEQNNQ-GTWQA 54 (238)
T ss_dssp CEEEESCTTSSEECTTC---CCCEEEEECTT-SCEEE
T ss_pred EEEECCCccceEEecCC---CccEEEEEccC-CeEEE
Confidence 79999999999999977 78999999874 37877
No 66
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=22.38 E-value=84 Score=21.35 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=5.0
Q ss_pred HHHHHHHHHhhc
Q 008015 17 ILILLFIFIACK 28 (581)
Q Consensus 17 ~~~~~~~~~~~~ 28 (581)
+++.++++|.+|
T Consensus 25 ~li~~l~~~~~r 36 (38)
T 2k1k_A 25 ALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHee
Confidence 334444444433
No 67
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=20.14 E-value=1.1e+02 Score=21.26 Aligned_cols=21 Identities=33% Similarity=0.678 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 008015 10 FTVLLMLILILLFIFIACKPW 30 (581)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~ 30 (581)
+.....+.++-=+++++.|||
T Consensus 19 ~~~F~~iA~vAH~l~w~wrPW 39 (41)
T 1nkz_B 19 TRVFLGLALVAHFLAFSATPW 39 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHSST
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 344444455556778899999
Done!