Query 008018
Match_columns 581
No_of_seqs 246 out of 1931
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 18:23:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008018.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008018hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2252 Xanthine/uracil/vitami 100.0 6.3E-85 1.4E-89 694.7 37.7 411 25-544 3-414 (436)
2 PF00860 Xan_ur_permease: Perm 100.0 3.8E-47 8.3E-52 407.2 24.8 374 42-527 1-387 (389)
3 TIGR00801 ncs2 uracil-xanthine 100.0 6.3E-41 1.4E-45 362.2 36.7 385 39-539 2-414 (415)
4 TIGR03173 pbuX xanthine permea 100.0 7.7E-40 1.7E-44 352.6 34.4 368 48-540 1-404 (406)
5 PRK10720 uracil transporter; P 100.0 3.9E-39 8.5E-44 349.4 37.5 376 29-543 2-407 (428)
6 TIGR03616 RutG pyrimidine util 100.0 2.4E-39 5.3E-44 351.0 34.6 372 30-541 19-425 (429)
7 COG2233 UraA Xanthine/uracil p 100.0 7.2E-39 1.6E-43 344.1 30.3 385 32-541 6-433 (451)
8 COG0659 SUL1 Sulfate permease 100.0 6.2E-37 1.3E-41 340.7 37.5 355 130-541 51-413 (554)
9 PRK11660 putative transporter; 100.0 9.7E-34 2.1E-38 317.3 37.6 358 132-541 61-444 (568)
10 PRK11412 putative uracil/xanth 100.0 4E-33 8.6E-38 302.0 36.8 381 42-541 8-427 (433)
11 TIGR00815 sulP high affinity s 100.0 5.9E-31 1.3E-35 294.6 33.2 356 132-542 46-424 (563)
12 KOG0236 Sulfate/bicarbonate/ox 99.9 2.2E-23 4.8E-28 236.9 26.7 353 131-541 111-492 (665)
13 PF00916 Sulfate_transp: Sulfa 99.9 2.2E-24 4.8E-29 220.4 11.8 260 195-507 1-278 (280)
14 KOG1292 Xanthine/uracil transp 99.8 1.8E-18 3.9E-23 185.4 26.3 358 31-510 2-412 (510)
15 TIGR00843 benE benzoate transp 99.8 2.9E-17 6.2E-22 175.7 34.0 320 123-536 54-394 (395)
16 PF03594 BenE: Benzoate membra 99.5 3E-11 6.5E-16 128.1 30.2 317 123-535 38-377 (378)
17 COG3135 BenE Uncharacterized p 99.1 6E-08 1.3E-12 101.8 28.0 320 124-538 54-395 (402)
18 TIGR00834 ae anion exchange pr 98.4 7.5E-05 1.6E-09 87.9 25.8 342 129-494 403-791 (900)
19 KOG1172 Na+-independent Cl/HCO 97.9 0.0043 9.3E-08 72.3 26.8 331 127-493 392-766 (876)
20 PF00955 HCO3_cotransp: HCO3- 96.8 0.00067 1.4E-08 75.9 2.3 346 128-496 66-474 (510)
21 PF11840 DUF3360: Protein of u 91.3 24 0.00052 38.6 19.3 49 182-230 145-193 (492)
22 COG2233 UraA Xanthine/uracil p 68.6 19 0.0004 40.4 8.2 67 471-537 129-216 (451)
23 TIGR00801 ncs2 uracil-xanthine 58.7 90 0.0019 34.4 11.3 124 414-537 43-205 (415)
24 TIGR00843 benE benzoate transp 54.7 86 0.0019 34.7 10.1 84 130-222 257-341 (395)
25 PRK10720 uracil transporter; P 52.8 38 0.00083 37.5 7.2 47 185-231 305-351 (428)
26 TIGR03173 pbuX xanthine permea 48.1 1.5E+02 0.0032 32.4 10.8 37 457-493 90-127 (406)
27 PRK11412 putative uracil/xanth 47.4 51 0.0011 36.8 7.1 89 130-231 278-366 (433)
28 PF06157 DUF973: Protein of un 39.3 2E+02 0.0044 30.4 9.7 49 451-499 84-139 (285)
29 PF00860 Xan_ur_permease: Perm 37.3 2.5E+02 0.0054 30.5 10.5 69 471-539 114-203 (389)
30 TIGR03616 RutG pyrimidine util 32.8 1E+02 0.0022 34.2 6.6 47 184-230 324-370 (429)
31 PRK11660 putative transporter; 30.4 1.8E+02 0.0039 33.4 8.3 125 413-539 316-446 (568)
32 TIGR00815 sulP high affinity s 28.9 4.1E+02 0.0088 30.5 10.8 129 405-541 291-427 (563)
33 PF13792 Sulfate_tra_GLY: Sulf 28.0 63 0.0014 27.8 3.1 24 132-155 48-72 (84)
34 PF05313 Pox_P21: Poxvirus P21 26.3 5.6E+02 0.012 25.5 9.5 50 522-573 135-185 (189)
35 PF03356 Pox_LP_H2: Viral late 24.7 28 0.00061 34.1 0.4 19 562-580 119-141 (189)
36 PF07613 DUF1576: Protein of u 23.8 4.9E+02 0.011 25.8 8.8 84 451-544 58-157 (183)
37 COG4392 Predicted membrane pro 23.6 3E+02 0.0065 25.1 6.6 66 472-540 40-106 (107)
38 PF01384 PHO4: Phosphate trans 21.6 8.1E+02 0.018 26.2 10.8 121 412-540 19-147 (326)
No 1
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=100.00 E-value=6.3e-85 Score=694.70 Aligned_cols=411 Identities=43% Similarity=0.732 Sum_probs=382.8
Q ss_pred hhhhccccccccCCCchhHHHHHhHHHHHHHHHHHhhhhhhhhccCCCcccccccccCCCCCCCCCccCCCCCCccccCC
Q 008018 25 SSRVGKRFKLKERNTTFTTELRAGTATFLTMAYILAVNASIIADSGGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQP 104 (581)
Q Consensus 25 ~~~~~~~f~~~~r~~~~~~ei~aG~~tflam~yi~~vnp~il~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (581)
++++|||||++||+|++|||++||+|||+||+||++|||+||+++|++
T Consensus 3 ~~~~~~~F~l~~~~t~vrtEiiAGlTTFltM~YIl~VnP~IL~~ag~~-------------------------------- 50 (436)
T COG2252 3 KGDLDRFFKLKEHGTTVRTEVIAGLTTFLTMAYIVFVNPQILGAAGMP-------------------------------- 50 (436)
T ss_pred hhHHHHHhCccccCchHHHHHHHHHHHHHHHHHhheecHHHHHhcCCC--------------------------------
Confidence 578999999999999999999999999999999999999999999984
Q ss_pred CCcCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHhCCccccccCcccchhhhhhhhhccCCCCchHHHHHHH
Q 008018 105 DESCKFNPVNPGYQSCLEKLRKDLIVATVASSLIGCVIMGAFANLPLALAPGMGTNAYFAYTVVGFHGSGNVSYRSALTA 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~li~At~l~agigtLl~gl~a~lP~~l~pgmGl~a~~a~~vv~~~G~~~~~~~~alga 184 (581)
.++++.||+++++++|++||+++|+|++++||||+|+||+|+++..+| ++||++|++
T Consensus 51 --------------------~~av~~AT~l~a~~gs~~mgl~An~P~alapgmglnAfFaftvv~~~g---i~wq~AL~a 107 (436)
T COG2252 51 --------------------VGAVFVATCLAAAIGSIAMGLYANLPIALAPGMGLNAFFAFTVVLGMG---LSWQVALGA 107 (436)
T ss_pred --------------------chhHHHHHHHHHHHHHHHHHHHHcCchhhcchhhHHHHHHHHHHHhcC---CcHHHHHHH
Confidence 468999999999999999999999999999999999999999999988 899999999
Q ss_pred HHHHHHHHHHHHhhhhHhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhh
Q 008018 185 VFMEGLIFLFISAIGFRSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVT 264 (581)
Q Consensus 185 v~laGii~lllg~~~l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~ 264 (581)
+|++|+++++++++++|+|++|.+|+++|+++.+|||+||+++|++++ |+++.++++++.+|
T Consensus 108 VF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGlFia~IgL~~~---Givv~~~~tlv~LG--------------- 169 (436)
T COG2252 108 VFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGLFIALIGLKNA---GIVVANPATLVALG--------------- 169 (436)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhC---CeEEecCcceEEee---------------
Confidence 999999999999999999999999999999999999999999999976 89888888877766
Q ss_pred ccCCCcccCCCCCccCccccccCCCChhHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHhcCccccCCCCCcCC
Q 008018 265 AANGTASLIPGGTVSGDILCLRDRMESPTFWLGVVGFVIIAYCLVKNIKGAMIYGVVFVTVVSWFRNTKVTAFPDTDAGN 344 (581)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~llglvgl~iiivl~~~~v~gaiLigIi~gtila~~~G~~v~~~p~~~vg~ 344 (581)
++++|.++++++|+++++++..||+||+++++|+..++++|++|.. ..+. +
T Consensus 170 -----------------------~~~~p~vll~i~G~~l~~~L~~~~i~Gaili~i~~~t~~g~~~g~~--~~~~---~- 220 (436)
T COG2252 170 -----------------------DFTSPGVLLAILGLLLIIVLVSRKIKGAILIGILVTTILGIILGID--VHFG---G- 220 (436)
T ss_pred -----------------------cCCCchHHHHHHHHHHHHHHHHhhccHhhhHHHHHHHHHHHHhccc--cccc---c-
Confidence 5778889999999999999999999999999999999999999951 1111 0
Q ss_pred ccccccccceeccccchhhccccccc-chhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhH
Q 008018 345 SAHKYFKKVVDVHVIESTAGALSFKS-MGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAM 423 (581)
Q Consensus 345 ~~~~~~~~~~~lP~~~~~~~~fd~~~-i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGl 423 (581)
....+|+..+.+.++|+.+ .....+++.+++++++++||++||+.++++++|+.|+|++.+|.+|++.+|++
T Consensus 221 -------~~~~~p~~~~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~~g~~~~~~~al~~D~v 293 (436)
T COG2252 221 -------LVGAPPSLSPIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDKNGKMPRIGKALLADSV 293 (436)
T ss_pred -------cccCCCCccchhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCCCCCccccchHHHHhHH
Confidence 0124566655566888876 66678888999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCccccchhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHhhcccccc
Q 008018 424 SIVVGALLGTSPVTTFIESSTGIREGGRTGLTALTVAGYFFLALFFTPLLASIPAWAVGPPLILVGVLMMRSVVEIEWDD 503 (581)
Q Consensus 424 anivgglfG~~PvTsf~eSaa~v~aGarTglsavv~g~~fll~lfl~Pli~~IP~aalagaLIlvG~~m~~~l~~I~~~~ 503 (581)
++++|+++|++|+|+|+||++++++|||||++++++|.+|++++|++|++.++|..|++|+|+++|.+|+++++++||+|
T Consensus 294 ~t~~ga~~GtS~~t~yIESaaGva~GgrTGltavv~g~lFl~~lf~~Pl~~~vP~~AtapaLi~vG~lM~~~v~~id~~d 373 (436)
T COG2252 294 ATVVGALFGTSTVTAYIESAAGVAAGGRTGLTAVVTGLLFLLSLFFSPLAALVPGYATAPALIIVGALMLSSVKQIDWSD 373 (436)
T ss_pred HHHHHHhcCCcchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHhCcHhhhhHHHHHHHHHHHhhhccCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 504 MRQAIPAFLTLILMPLTYSIAYGLIGGICTYIVLHIWDWGH 544 (581)
Q Consensus 504 ~~e~ipaf~tiv~~plt~sI~~GI~~G~i~yvil~l~~~~~ 544 (581)
..|.+|+|+|+++||+||||++|+++|+++|++.|+....|
T Consensus 374 ~~ea~PaF~tiv~mplTySIa~Gia~Gfi~y~i~k~~~g~~ 414 (436)
T COG2252 374 FTEAVPAFLTIVMMPLTYSIADGIAFGFISYVILKVFTGRW 414 (436)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999999999999876444
No 2
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=3.8e-47 Score=407.21 Aligned_cols=374 Identities=30% Similarity=0.414 Sum_probs=264.6
Q ss_pred hHHHHHhHHHHHHHHHHHhhhhhhhhcc-CCCcccccccccCCCCCCCCCccCCCCCCccccCCCCcCCCCCCCCCcchh
Q 008018 42 TTELRAGTATFLTMAYILAVNASIIADS-GGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQPDESCKFNPVNPGYQSC 120 (581)
Q Consensus 42 ~~ei~aG~~tflam~yi~~vnp~il~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (581)
|||+++|+|||++|+|++++||.|++++ |.+ .|
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~~-------------------------------~~--------------- 34 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGLD-------------------------------AD--------------- 34 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS-----------------------------------------------------
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhccccc-------------------------------ch---------------
Confidence 6899999999999999999999999987 542 11
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHhCCccccccCcccchhhhhhhhhcc-CCCCchHHHHHHHHHHHHHHHHHHHhhh
Q 008018 121 LEKLRKDLIVATVASSLIGCVIMGAFANLPLALAPGMGTNAYFAYTVVGFH-GSGNVSYRSALTAVFMEGLIFLFISAIG 199 (581)
Q Consensus 121 ~~~~~~~li~At~l~agigtLl~gl~a~lP~~l~pgmGl~a~~a~~vv~~~-G~~~~~~~~algav~laGii~lllg~~~ 199 (581)
...++++|+++++++|++|++..|.|+.+.||++.+.+.++..+..+ +..+.+||.++++++++|++++++++++
T Consensus 35 ----~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~~~~l~~~g 110 (389)
T PF00860_consen 35 ----TAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGILFILLGLTG 110 (389)
T ss_dssp --------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ----hhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHHHHHHHHhc
Confidence 45899999999999999999988888888888888877766665442 1123789999999999999999999999
Q ss_pred hHhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhhccCCCcccCCCCCcc
Q 008018 200 FRSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVTAANGTASLIPGGTVS 279 (581)
Q Consensus 200 l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (581)
.|+|++|++||.|+.++..+||++++.+++++.. ....+++. .
T Consensus 111 ~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~---~~~~~~~~-~--------------------------------- 153 (389)
T PF00860_consen 111 LRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAG---GIWGNPDG-L--------------------------------- 153 (389)
T ss_dssp SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTT---SS---BTT-----------------------------------
T ss_pred hHHHHHHHhChhheEeeEeeehhhhhhhHhhccc---cccccccc-c---------------------------------
Confidence 9999999999999999999999999999999873 22111100 0
Q ss_pred CccccccCCCChh-HHHHHHHHHHHHHHH----HhhccchhHHHHHHHHHHHHHHhcCccccCCCCCcCCccccccccce
Q 008018 280 GDILCLRDRMESP-TFWLGVVGFVIIAYC----LVKNIKGAMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSAHKYFKKVV 354 (581)
Q Consensus 280 ~~~~~~~~~~~~p-~~llglvgl~iiivl----~~~~v~gaiLigIi~gtila~~~G~~v~~~p~~~vg~~~~~~~~~~~ 354 (581)
...++ ...+++..+.+.+.+ ..++.+.++++|+++++++++.+|. .|+++. +.+ ++|+
T Consensus 154 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ailigi~~g~i~~~~~g~--~~~~~~-~~~------~~~~ 216 (389)
T PF00860_consen 154 --------LVGDGKNLGLAVLTLLFILLLSLFLKGFLRKGAILIGIIAGWIVAAILGV--VDFSPS-VSS------APWF 216 (389)
T ss_dssp --------B---HHHHHHHHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHHHHHHH--TTSSH--HHH------S-SS
T ss_pred --------ccccccccccccccchhhhhhhhhhhhhcccccchhhhhhhhhhhhcccc--cccCcc-ccc------cccc
Confidence 01111 222333333333332 2334578999999999999999985 666541 111 3688
Q ss_pred eccccchh-hcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhhcCC
Q 008018 355 DVHVIEST-AGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGALLGT 433 (581)
Q Consensus 355 ~lP~~~~~-~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivgglfG~ 433 (581)
.+|.+.++ .++||+ ..+..++.+.+++++|++|++.++++..|..+++ +++.+|++.+||++++++++||+
T Consensus 217 ~~p~~~~~g~p~f~~------~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~--~~~~~r~l~~dg~~~~l~gl~G~ 288 (389)
T PF00860_consen 217 SLPSPFPFGWPSFDP------GAILTFLIFALVAMFESIGTIVAVARIAGKDDPR--PPRIRRGLLADGLGTILAGLFGT 288 (389)
T ss_dssp --------------H------HHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCC--CCCHHHHHHHHHHHHHHHHHHT-
T ss_pred ccccccccccccccH------HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCcc--chhhcccceeeeeeeeechhhcC
Confidence 88865431 112333 4456778888999999999999999987654433 88999999999999999999999
Q ss_pred Cccccchhhhhhhhcc----cccchhHHHHHHHHHHHHHHHHHHhhcChHHHHHH-HHHHHHHHHHHhhccccccccchh
Q 008018 434 SPVTTFIESSTGIREG----GRTGLTALTVAGYFFLALFFTPLLASIPAWAVGPP-LILVGVLMMRSVVEIEWDDMRQAI 508 (581)
Q Consensus 434 ~PvTsf~eSaa~v~aG----arTglsavv~g~~fll~lfl~Pli~~IP~aalaga-LIlvG~~m~~~l~~I~~~~~~e~i 508 (581)
+|+|+|+||++.++++ +||++++.+..+++.++.++.|+++.||.++++++ ++++|++|++++++++|+|.+|.-
T Consensus 289 ~~~t~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~~~r 368 (389)
T PF00860_consen 289 SPTTTYSENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDLDSAR 368 (389)
T ss_dssp --EEE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-SHH
T ss_pred CCCccccccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheecccCccc
Confidence 9999999999999998 88888888888888888899999999999997666 789999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 008018 509 PAFLTLILMPLTYSIAYGL 527 (581)
Q Consensus 509 paf~tiv~~plt~sI~~GI 527 (581)
+.+++.+.+++++++..+.
T Consensus 369 ~~~iv~~~l~~g~~i~~~p 387 (389)
T PF00860_consen 369 NAFIVGLSLPLGLSIAFGP 387 (389)
T ss_dssp HHHHHHHHHHHHHH-----
T ss_pred cHHHHHHhHHHHHHHhccC
Confidence 9999999999999987764
No 3
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=6.3e-41 Score=362.21 Aligned_cols=385 Identities=17% Similarity=0.217 Sum_probs=292.7
Q ss_pred CchhHHHHHhHHHHHHHHHHHhhhhhhhhccCCCcccccccccCCCCCCCCCccCCCCCCccccCCCCcCCCCCCCCCcc
Q 008018 39 TTFTTELRAGTATFLTMAYILAVNASIIADSGGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQPDESCKFNPVNPGYQ 118 (581)
Q Consensus 39 ~~~~~ei~aG~~tflam~yi~~vnp~il~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (581)
.++++.+..|+||+++|+-..++.|.+++++-++
T Consensus 2 ~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~l~---------------------------------------------- 35 (415)
T TIGR00801 2 PPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAPLS---------------------------------------------- 35 (415)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC----------------------------------------------
Confidence 4788999999999999999999999999975432
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHhCCccccccCcccc-hhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHh
Q 008018 119 SCLEKLRKDLIVATVASSLIGCVIMGAFANLPLALAPGMGTN-AYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISA 197 (581)
Q Consensus 119 ~~~~~~~~~li~At~l~agigtLl~gl~a~lP~~l~pgmGl~-a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~ 197 (581)
.+++..++++|+++++++|++|+++.|.|..+.+.||.+ +|+++.++...+ ++||.++++++++|++++++++
T Consensus 36 ---~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~---~~~~~~~g~~i~~gl~~~ll~~ 109 (415)
T TIGR00801 36 ---AEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSG---LGIPAIMGALIATGLVYTLLSL 109 (415)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence 134889999999999999999999988887777888888 898887766544 7899999999999999999998
Q ss_pred h--h-hHhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhhccCCCcccCC
Q 008018 198 I--G-FRSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVTAANGTASLIP 274 (581)
Q Consensus 198 ~--~-l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~ 274 (581)
+ | .|+|++|++||.|+.++.++||++|+.+++++.. |. ..++.+
T Consensus 110 ~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~--g~-~~~~~~------------------------------ 156 (415)
T TIGR00801 110 LIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAA--GG-EAAMSS------------------------------ 156 (415)
T ss_pred HHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhc--cC-CCcccc------------------------------
Confidence 5 4 4789999999999999999999999999999873 22 111100
Q ss_pred CCCccCccccccCCCChh-HHHHHHHHHHHHHHHHhhccch-----hHHHHHHHHHHHHHHhcCccccCCCCCcCCcccc
Q 008018 275 GGTVSGDILCLRDRMESP-TFWLGVVGFVIIAYCLVKNIKG-----AMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSAHK 348 (581)
Q Consensus 275 ~~~~~~~~~~~~~~~~~p-~~llglvgl~iiivl~~~~v~g-----aiLigIi~gtila~~~G~~v~~~p~~~vg~~~~~ 348 (581)
.++.++ ...+++++++++ ++..|+.|+ ++++++++++++++.+|. .|++. +.+
T Consensus 157 ------------~~~~~~~~~~vg~~~l~~~-vl~~~~~~g~~~~~aiLigiv~g~i~a~~lg~--~~~~~--v~~---- 215 (415)
T TIGR00801 157 ------------ATYGSLENLGVAFVVLALI-ILLNRFGKGFLKSISILIGILVGYILALFMGI--VDFSP--VID---- 215 (415)
T ss_pred ------------cccCchhhHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHHcCC--ccchh--hcc----
Confidence 123233 356777777655 444444454 789999999999999996 56643 222
Q ss_pred ccccceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHh
Q 008018 349 YFKKVVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVG 428 (581)
Q Consensus 349 ~~~~~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivg 428 (581)
.+|+.+|++.++.++||++ .+..++.+.+++++|++|+..++++++|. |.++ +++.||++.+||++|+++
T Consensus 216 --~~~~~lP~~~~~g~~f~~~------~~~~~~~i~lv~~~es~g~~~a~a~~~g~-~~~~-~~~~~r~l~adGl~~i~a 285 (415)
T TIGR00801 216 --APWFSLPTPFTFGPSFEWP------AILTMLPVAIVSLVESIGDITATADVSGR-DLSG-DPRLHRGVLADGLATLLA 285 (415)
T ss_pred --CcccccCCccCCCceecHH------HHHHHHHHHHHHHHHhhhHHHHHHHHhCC-CCCC-CccccchHHHhhHHHHHH
Confidence 3578888875321245543 44567888999999999999999988753 2222 678999999999999999
Q ss_pred hhcCCCccccchhhhhhhh-cccccchhHHHHHHHHHH-HHH--HHHHHhhcChHHHHHHH-HHHHHHHHHHhhcc---c
Q 008018 429 ALLGTSPVTTFIESSTGIR-EGGRTGLTALTVAGYFFL-ALF--FTPLLASIPAWAVGPPL-ILVGVLMMRSVVEI---E 500 (581)
Q Consensus 429 glfG~~PvTsf~eSaa~v~-aGarTglsavv~g~~fll-~lf--l~Pli~~IP~aalagaL-IlvG~~m~~~l~~I---~ 500 (581)
++||++|+|+|+||++-++ .|.++|.+...+|+++++ .++ +.+++++||.+++|+++ +++|.+...++|.+ +
T Consensus 286 glfG~~p~t~~sen~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~~l~~~~ 365 (415)
T TIGR00801 286 GLFGGFPNTTFAQNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGIRILIRNK 365 (415)
T ss_pred HhcCCCCCcchhhhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999986665 477788877777777663 455 77899999999999995 58888877666544 5
Q ss_pred cccccch-hhHHHHH--H---HHHHHHH----HHHHHHHHHHHHHHHHH
Q 008018 501 WDDMRQA-IPAFLTL--I---LMPLTYS----IAYGLIGGICTYIVLHI 539 (581)
Q Consensus 501 ~~~~~e~-ipaf~ti--v---~~plt~s----I~~GI~~G~i~yvil~l 539 (581)
++++++. +..+-.. + ..|-.++ ..+|+++|.++.+++|+
T Consensus 366 ~~~~r~~~i~~~s~~~g~~~~~~p~~~~~~p~~~~g~~~g~~~ai~Ln~ 414 (415)
T TIGR00801 366 LDNRRNRNIIAASVGLGLGVTGVPDIFGNFPLLLSGIALAGIVAILLNL 414 (415)
T ss_pred cCcccceehHHHHHHHHHHHhccHHHHhhCchhcccHHHHHHHHHHHhc
Confidence 5523332 2221111 1 1242332 45999999999999886
No 4
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=7.7e-40 Score=352.56 Aligned_cols=368 Identities=20% Similarity=0.259 Sum_probs=280.2
Q ss_pred hHHHHHHHHHHHhhhhhhhhcc-CCCcccccccccCCCCCCCCCccCCCCCCccccCCCCcCCCCCCCCCcchhhhhhhh
Q 008018 48 GTATFLTMAYILAVNASIIADS-GGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQPDESCKFNPVNPGYQSCLEKLRK 126 (581)
Q Consensus 48 G~~tflam~yi~~vnp~il~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (581)
|+||.++|+-..+++|.+++++ |+| + ++..
T Consensus 1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~-------------------------------~------------------~~~~ 31 (406)
T TIGR03173 1 GLQHVLAMYAGAVAVPLIVGGALGLS-------------------------------A------------------EQTA 31 (406)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCCC-------------------------------H------------------HHHH
Confidence 6899999999999999999998 875 1 3478
Q ss_pred HHHHHHHHHHHHHHHHHH--H---HhCCccccccCcccchhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhH
Q 008018 127 DLIVATVASSLIGCVIMG--A---FANLPLALAPGMGTNAYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISAIGFR 201 (581)
Q Consensus 127 ~li~At~l~agigtLl~g--l---~a~lP~~l~pgmGl~a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~~~l~ 201 (581)
.++++|+++++++|++|. + .+|+|++++|++ +|+++.+....+ ++|+.++++++++|+++++++ +++
T Consensus 32 ~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~---a~~~~~~~~~~~---~~~~~~~ga~~v~Gii~illg--~~~ 103 (406)
T TIGR03173 32 YLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSF---AAVGPMIAIGAG---GGLGAIFGAVIVAGLFVILLA--PFF 103 (406)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCccceeecCcH---HHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHH--HHH
Confidence 999999999999999994 3 389999999996 577765544333 689999999999999999999 467
Q ss_pred hhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhhccCCCcccCCCCCccCc
Q 008018 202 SKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVTAANGTASLIPGGTVSGD 281 (581)
Q Consensus 202 ~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (581)
+|++|++||.|+..+.+.||+.++..++++..| . . ..
T Consensus 104 ~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g--~---~-----~~--------------------------------- 140 (406)
T TIGR03173 104 SKLVRFFPPVVTGTVITLIGLSLMPVAINWAAG--G---A-----GA--------------------------------- 140 (406)
T ss_pred HHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhcc--C---C-----Cc---------------------------------
Confidence 899999999999999999999999888876521 0 0 00
Q ss_pred cccccCCCChh-HHHHHHHHHHHHHHHHhhccch-----hHHHHHHHHHHHHHHhcCccccCCCCCcCCcccccccccee
Q 008018 282 ILCLRDRMESP-TFWLGVVGFVIIAYCLVKNIKG-----AMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSAHKYFKKVVD 355 (581)
Q Consensus 282 ~~~~~~~~~~p-~~llglvgl~iiivl~~~~v~g-----aiLigIi~gtila~~~G~~v~~~p~~~vg~~~~~~~~~~~~ 355 (581)
.++.++ ...+++++++++ ++..|+.|+ ++|+++++++++++.+|. .|++. +++ .+|+.
T Consensus 141 -----~~~~~~~~~~l~l~~l~~~-il~~~~~~~~~~~~aiLi~ivvg~iva~~~g~--~~~~~--i~~------~~~~~ 204 (406)
T TIGR03173 141 -----PDFGSPQNLGLALLTLVII-LLLNRFGKGFLRSIAVLLGLVVGTIVAAALGM--VDFSG--VAE------APWFA 204 (406)
T ss_pred -----ccccchHHHHHHHHHHHHH-HHHHHHhhhHHHHhHHHHHHHHHHHHHHHhcC--CCchh--hcc------CCeee
Confidence 022233 334777776655 333344443 789999999999999996 55543 222 25677
Q ss_pred ccccchh-hcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhhcCCC
Q 008018 356 VHVIEST-AGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGALLGTS 434 (581)
Q Consensus 356 lP~~~~~-~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivgglfG~~ 434 (581)
+|++.++ .++||+..+ ..++.+.+++++|++++..+++++. |++.|+++.||++.+||++|+++++||++
T Consensus 205 ~P~~~~~~~P~f~~~~~------~~~~~~~lv~~~esig~~~a~~~~~---g~~~~~~~~~~~l~~~Gi~~i~aglfG~~ 275 (406)
T TIGR03173 205 LPTPFHFGAPTFDLVAI------LTMIIVYLVSMVETTGDFLALGEIT---GRPITEKDLAGGLRADGLGSALGGLFNTF 275 (406)
T ss_pred CCCCCcCCCCeeCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHh---CCCCCchhccchHHhccHHHHHHHHhCCC
Confidence 7764321 235565533 3456688899999999999998864 45667789999999999999999999999
Q ss_pred ccccchhhhhhhh-cccccchhHHHHHHHHHHHHH---HHHHHhhcChHHHHHHH-HHHHHHHHHH---hhccccccccc
Q 008018 435 PVTTFIESSTGIR-EGGRTGLTALTVAGYFFLALF---FTPLLASIPAWAVGPPL-ILVGVLMMRS---VVEIEWDDMRQ 506 (581)
Q Consensus 435 PvTsf~eSaa~v~-aGarTglsavv~g~~fll~lf---l~Pli~~IP~aalagaL-IlvG~~m~~~---l~~I~~~~~~e 506 (581)
|+|+|+||++.++ .|+|||++.+++|+++++..+ +.+++++||.+++++++ +++|.+...+ +++.||++|++
T Consensus 276 p~t~~~~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~~~rn 355 (406)
T TIGR03173 276 PYTSFSQNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLVMFGMVAASGIRILSKVDFDRRRN 355 (406)
T ss_pred CCcchhhhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccCcce
Confidence 9999999987765 699999999888887765433 67899999999999985 4677777654 45667877765
Q ss_pred hhhHHHHHH------HHH---------HHHHHHHHHHHHHHHHHHHHHH
Q 008018 507 AIPAFLTLI------LMP---------LTYSIAYGLIGGICTYIVLHIW 540 (581)
Q Consensus 507 ~ipaf~tiv------~~p---------lt~sI~~GI~~G~i~yvil~l~ 540 (581)
.+..-+.++ ..| +.+-+.+|++.|.++++++|+.
T Consensus 356 ~~i~g~~~~~g~~~~~~p~~~~~~p~~~~~~~~~~~~~g~~~ai~l~~~ 404 (406)
T TIGR03173 356 LLIVAVSLGLGLGPTVVPEFFSQLPAWAQTLFSSGIAVGAISAILLNLL 404 (406)
T ss_pred ehhhHHHHHHHHHHHhhHHHHHHChHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 443322221 233 3344679999999999999875
No 5
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=3.9e-39 Score=349.38 Aligned_cols=376 Identities=17% Similarity=0.192 Sum_probs=273.9
Q ss_pred ccccccccCCCchhHHHHHhHHHHHHHHHHHhhhhhhhhccCCCcccccccccCCCCCCCCCccCCCCCCccccCCCCcC
Q 008018 29 GKRFKLKERNTTFTTELRAGTATFLTMAYILAVNASIIADSGGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQPDESC 108 (581)
Q Consensus 29 ~~~f~~~~r~~~~~~ei~aG~~tflam~yi~~vnp~il~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (581)
+..|+++|| .++++.++.|+||+++|+-..++.|.++ |++ +
T Consensus 2 ~~~~~~~~~-~p~~~~~~lglQhvl~m~~~~i~~Pli~---gl~-------------------------------~---- 42 (428)
T PRK10720 2 RRAIGVSER-PPLLQTIPLSLQHLFAMFGATVLVPILF---HIN-------------------------------P---- 42 (428)
T ss_pred CcccCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHhhc---CCC-------------------------------H----
Confidence 457889998 5889999999999999999999999998 553 1
Q ss_pred CCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHH--hCCccccccCcccchhhhhhhhhccCCCCchHHHHHHHHH
Q 008018 109 KFNPVNPGYQSCLEKLRKDLIVATVASSLIGCVIMGAF--ANLPLALAPGMGTNAYFAYTVVGFHGSGNVSYRSALTAVF 186 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~li~At~l~agigtLl~gl~--a~lP~~l~pgmGl~a~~a~~vv~~~G~~~~~~~~algav~ 186 (581)
..++++||++|++|.+. .|+|+.++|+ ++|+...... + ..+||.++++++
T Consensus 43 ---------------------~~~l~~sGi~TliQ~~~~g~rlP~~~G~s---fa~i~~~~~~--~--~~~~~~~lgav~ 94 (428)
T PRK10720 43 ---------------------ATVLLFNGIGTLLYLFICKGKIPAYLGSS---FAFISPVLLL--L--PLGYEVALGGFI 94 (428)
T ss_pred ---------------------HHHHHHHHHHHHHHHHhccCccceEEeCc---HHHHHHHHHH--H--HccHHHHHHHHH
Confidence 11679999999999863 5999999996 5555432221 1 147999999999
Q ss_pred HHHHHHHHHHhh--hh-HhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchh
Q 008018 187 MEGLIFLFISAI--GF-RSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVV 263 (581)
Q Consensus 187 laGii~lllg~~--~l-~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~ 263 (581)
++|+++++++++ |+ |+|++|+|||.|++.+.+.||+.++.+++++. |....+ +
T Consensus 95 v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~---g~~~~~-------~-------------- 150 (428)
T PRK10720 95 MCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMA---GLLPAE-------G-------------- 150 (428)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhc---cccCCC-------C--------------
Confidence 999999999997 33 78999999999988888888888888777643 211100 0
Q ss_pred hccCCCcccCCCCCccCccccccCCCChhHHHHHHHHHHHHHHHHhhccch-----hHHHHHHHHHHHHHHhcCccccCC
Q 008018 264 TAANGTASLIPGGTVSGDILCLRDRMESPTFWLGVVGFVIIAYCLVKNIKG-----AMIYGVVFVTVVSWFRNTKVTAFP 338 (581)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~llglvgl~iiivl~~~~v~g-----aiLigIi~gtila~~~G~~v~~~p 338 (581)
+..+.+..+++++++++++++ .++.|+ ++++|++++|++++++|. .|++
T Consensus 151 -----------------------~~~~~~~~~lalv~l~iil~~-~~~~kg~~~~~~iLigIvvG~ila~~lG~--~d~~ 204 (428)
T PRK10720 151 -----------------------QTPDSKTIIISMVTLAVTVLG-SVLFRGFLAIIPILIGVLVGYALSFAMGM--VDTT 204 (428)
T ss_pred -----------------------cccchHHHHHHHHHHHHHHHH-HHHhccHHHHhHHHHHHHHHHHHHHHhcC--CCHH
Confidence 012334566888887776653 222232 789999999999999996 5554
Q ss_pred CCCcCCccccccccceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCC-CccCcChh
Q 008018 339 DTDAGNSAHKYFKKVVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNG-DFEGQYFA 417 (581)
Q Consensus 339 ~~~vg~~~~~~~~~~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g-~~~~~~~~ 417 (581)
. +++ ++|+.+|++. .++||+..+ ..++.++++.++|++|++.++++.. +++. ++++.||+
T Consensus 205 ~--v~~------a~~~~lP~~~--~P~fd~~~i------l~l~~~~lv~~~EsiG~~~a~~~~~---~~~~~~~~~~~r~ 265 (428)
T PRK10720 205 P--IIE------AHWFALPTFY--TPRFEWFAI------LTILPAALVVIAEHVGHLVVTANIV---KKDLLRDPGLHRS 265 (428)
T ss_pred H--hhc------CccccCCCCC--CCcCcHHHH------HHHHHHHHHHHHHHHHHHHHHHHhh---CCCCCCCccccch
Confidence 3 232 2577888764 346676543 3456667788999999999998753 4443 56899999
Q ss_pred hhhhhHHHHHhhhcCCCccccchhhhhhhhcccccchhHHH---HHHHHHHHH-H---HHHHHhhcChHHHHHH-HHHHH
Q 008018 418 FMSDAMSIVVGALLGTSPVTTFIESSTGIREGGRTGLTALT---VAGYFFLAL-F---FTPLLASIPAWAVGPP-LILVG 489 (581)
Q Consensus 418 LiadGlanivgglfG~~PvTsf~eSaa~v~aGarTglsavv---~g~~fll~l-f---l~Pli~~IP~aalaga-LIlvG 489 (581)
+++||++|+++++||++|+|+|+||.+- +++||+++-. .+.++++.+ + +.++++.||.+++|++ ++++|
T Consensus 266 l~adGlatii~glfG~~p~tty~en~g~---ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg 342 (428)
T PRK10720 266 MFANGLSTVISGFFGSTPNTTYGENIGV---MAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYG 342 (428)
T ss_pred HhhhhHHHHHHHhcCCCCccccccccce---eeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999844 4689987733 244454443 4 5568999999999999 45788
Q ss_pred HHHHHHhhc-----cccccccchhhHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 490 VLMMRSVVE-----IEWDDMRQAIPAFLTLI------LMPLTYSIAYGLIGGICTYIVLHIWDWG 543 (581)
Q Consensus 490 ~~m~~~l~~-----I~~~~~~e~ipaf~tiv------~~plt~sI~~GI~~G~i~yvil~l~~~~ 543 (581)
.+...++|. .|++++++.+..-+.+. ..++..=...|+..|.++.+++|++...
T Consensus 343 ~i~~~Gi~~l~~~~~~~~~~~n~~i~~~~l~~g~~~~~~~~~~~~~~gi~~g~~~ai~Lnlll~~ 407 (428)
T PRK10720 343 VIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKL 407 (428)
T ss_pred HHHHHHHHHHHHccCCCCcccchhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhcc
Confidence 877655544 45555555443221111 1122222458899999999998888643
No 6
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=2.4e-39 Score=350.99 Aligned_cols=372 Identities=18% Similarity=0.220 Sum_probs=271.8
Q ss_pred cccccccCCCchhHHHHHhHHHHHHHHHHHhhhhhhhhccCCCcccccccccCCCCCCCCCccCCCCCCccccCCCCcCC
Q 008018 30 KRFKLKERNTTFTTELRAGTATFLTMAYILAVNASIIADSGGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQPDESCK 109 (581)
Q Consensus 30 ~~f~~~~r~~~~~~ei~aG~~tflam~yi~~vnp~il~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (581)
..|+++|| .++++|+++|+||+++|+|++++||.|++ ++ +
T Consensus 19 ~~~~~d~~-~p~~~~~~~GlQh~lam~~~~v~~Plilg---l~-------------------------------~----- 58 (429)
T TIGR03616 19 HPVAPDER-LPAAQTIVMGLQHAVAMFGATVLMPLLMG---FD-------------------------------P----- 58 (429)
T ss_pred cccCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHhC---CC-------------------------------H-----
Confidence 56889998 59999999999999999999999999983 53 1
Q ss_pred CCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHH--hCCccccccCcccchhhhhhhhhccC----CCCchHHHHHH
Q 008018 110 FNPVNPGYQSCLEKLRKDLIVATVASSLIGCVIMGAF--ANLPLALAPGMGTNAYFAYTVVGFHG----SGNVSYRSALT 183 (581)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~li~At~l~agigtLl~gl~--a~lP~~l~pgmGl~a~~a~~vv~~~G----~~~~~~~~alg 183 (581)
. +|+++|+++|++|+.. +|+|++++++ .+| ...++...+ ..+.+++.+++
T Consensus 59 ----------------~----~tl~~sGi~TllQ~~~~G~rlP~v~G~s---f~f-~~~~~~~~~~~~~~~~~~~~~a~g 114 (429)
T TIGR03616 59 ----------------N----LTILMSGIGTLLFFLITGGRVPSYLGSS---AAF-VGAVIAATGYNGQGTNPNIALALG 114 (429)
T ss_pred ----------------h----HHHHHHHHHHHHHHHHhCCCceeEEcCc---HHH-HHHHHHHHhhcccCCcchHHHHHH
Confidence 1 5899999999999854 9999998775 233 333332211 02235799999
Q ss_pred HHHHHHHHHHHHHhhhhH---hhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhcccc
Q 008018 184 AVFMEGLIFLFISAIGFR---SKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALA 260 (581)
Q Consensus 184 av~laGii~lllg~~~l~---~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~ 260 (581)
+++++|+++++++++++| ++++|++||.|+..+...||+.++.+++++..+
T Consensus 115 a~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~-------------------------- 168 (429)
T TIGR03616 115 GIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSA-------------------------- 168 (429)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhccc--------------------------
Confidence 999999999999998776 899999999999999999999999999875310
Q ss_pred chhhccCCCcccCCCCCccCccccccCCCChhHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHh----cCc-
Q 008018 261 PVVTAANGTASLIPGGTVSGDILCLRDRMESPTFWLGVVGFVIIAYCLVKNI--KGAMIYGVVFVTVVSWFR----NTK- 333 (581)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~llglvgl~iiivl~~~~v--~gaiLigIi~gtila~~~----G~~- 333 (581)
++++++..++.++.+++.. ++.|+. +.++|+|+++||++++.+ |..
T Consensus 169 --------------------------~~~~~~~al~tl~~i~l~~-l~~~~~l~~~avLiGivvG~iva~~l~~~~g~~~ 221 (429)
T TIGR03616 169 --------------------------SGFDSWMAVLTILCIGAVA-VFTRGMLQRLLILVGLIAAYLAYFILTNVFGLGK 221 (429)
T ss_pred --------------------------cccccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCc
Confidence 0122333333333332322 233333 568999999999998875 321
Q ss_pred cccCCCCCcCCccccccccceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccC
Q 008018 334 VTAFPDTDAGNSAHKYFKKVVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEG 413 (581)
Q Consensus 334 v~~~p~~~vg~~~~~~~~~~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~ 413 (581)
.+|+.. +.+ ++|+.+|++. .++||+..+ ..++.++++.++|++|+..++++..| ++ .+++
T Consensus 222 ~vd~s~--v~~------a~~~~lP~~~--~p~f~~~~i------l~~~~~~lv~~~esiG~~~a~~~~~~---~~-~~~~ 281 (429)
T TIGR03616 222 AVDFSP--ISQ------AAWFGLPNFH--TPVFNANAM------LLIAPVALILVAENLGHFKAVAGMTG---RN-LDPY 281 (429)
T ss_pred cccCcc--ccc------CccccCCcCC--CceEcHHHH------HHHHHHHHHHHHHhhHHHHHHHHHhC---CC-CCch
Confidence 134432 222 3688999865 346776543 45666788999999999999998654 33 3457
Q ss_pred cChhhhhhhHHHHHhhhcCCCccccchhhhhhhhcccccchhH---HHHHHHHHHHHHHHH----HHhhcChHHHHHHH-
Q 008018 414 QYFAFMSDAMSIVVGALLGTSPVTTFIESSTGIREGGRTGLTA---LTVAGYFFLALFFTP----LLASIPAWAVGPPL- 485 (581)
Q Consensus 414 ~~~~LiadGlanivgglfG~~PvTsf~eSaa~v~aGarTglsa---vv~g~~fll~lfl~P----li~~IP~aalagaL- 485 (581)
++|++++||++|++++++|++|.|+|+||.+. +++||+++ +..+..+++.+.+.| +++.||.+++||++
T Consensus 282 i~r~l~adGl~t~~agl~g~~p~tt~~en~g~---i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i 358 (429)
T TIGR03616 282 MGRAFVGDGLATMLSGSVGGTGVTTYAENIGV---MAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASI 358 (429)
T ss_pred hccchhhhhHHHHHHHhcCCCCCcceeeeeee---eeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999844 46888873 445555667788888 99999999999995
Q ss_pred HHHHHHHHHHhh-----ccccccccchhhHHHHH----HHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q 008018 486 ILVGVLMMRSVV-----EIEWDDMRQAIPAFLTL----ILMP--LTYSIAYGLIGGICTYIVLHIWD 541 (581)
Q Consensus 486 IlvG~~m~~~l~-----~I~~~~~~e~ipaf~ti----v~~p--lt~sI~~GI~~G~i~yvil~l~~ 541 (581)
+++|.+...++| +.|++++++.+..-+.+ ..++ +..=..+|+..|.++.+++|++.
T Consensus 359 ~~fg~i~~~Gi~~l~~~~~d~~~~rn~~ivg~sl~~g~g~~~~~~~~~~~s~i~~~~~~ai~Ln~~l 425 (429)
T TIGR03616 359 VVFGLIAVAGARIWVQNKVDLTQNGNLIMVAVTLVLGAGDFALTIGAFTLGGIGTATFGAIVLNALL 425 (429)
T ss_pred HHHHHHHHHHHHHHHhccCCcCccceeehhHHHHHHHhHHHHHHHHHHhhCcHHHHHHHHHHHHHhc
Confidence 588888876665 44666555544321111 1111 22124489999999999999875
No 7
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=7.2e-39 Score=344.11 Aligned_cols=385 Identities=22% Similarity=0.287 Sum_probs=291.1
Q ss_pred cccccCCCchhHHHHHhHHHHHHHHHHHhhhhhhhhcc-CCCcccccccccCCCCCCCCCccCCCCCCccccCCCCcCCC
Q 008018 32 FKLKERNTTFTTELRAGTATFLTMAYILAVNASIIADS-GGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQPDESCKF 110 (581)
Q Consensus 32 f~~~~r~~~~~~ei~aG~~tflam~yi~~vnp~il~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (581)
++..+++.+.+|-+..|+||+++|+...++.|.+++.+ +.+
T Consensus 6 ~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~-------------------------------------- 47 (451)
T COG2233 6 YVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLS-------------------------------------- 47 (451)
T ss_pred cCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCC--------------------------------------
Confidence 33344446899999999999999999999999999976 553
Q ss_pred CCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHH-----hCCccccccCcccchhhhhhhhhccCCCCc--hHHHHHH
Q 008018 111 NPVNPGYQSCLEKLRKDLIVATVASSLIGCVIMGAF-----ANLPLALAPGMGTNAYFAYTVVGFHGSGNV--SYRSALT 183 (581)
Q Consensus 111 ~~~~~~~~~~~~~~~~~li~At~l~agigtLl~gl~-----a~lP~~l~pgmGl~a~~a~~vv~~~G~~~~--~~~~alg 183 (581)
.|+...++++++++||++|++|.+. .++|..++++ ++|++-.+.. + .++ +.+.+++
T Consensus 48 -----------~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~s---Fafi~p~i~~--~-~~~g~~~~~~~G 110 (451)
T COG2233 48 -----------AEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSS---FAFVAPMIAI--G-GTTGDGIAALLG 110 (451)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEech---HHHHHHHHHH--H-hccCCchHHHHH
Confidence 1457899999999999999999862 3799999987 5555533322 2 223 4899999
Q ss_pred HHHHHHHHHHHHHhhhhHh-hhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccch
Q 008018 184 AVFMEGLIFLFISAIGFRS-KLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPV 262 (581)
Q Consensus 184 av~laGii~lllg~~~l~~-~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~ 262 (581)
+++.+|+++++++... + |+.|++||.|++.+..-||+.++.++++++.| --... +
T Consensus 111 ~ii~ag~~~~li~~~~--~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G--~~~~~-------~------------- 166 (451)
T COG2233 111 GIIAAGLVYFLISPIV--KIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGG--GPGAA-------G------------- 166 (451)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhC--CCCCC-------C-------------
Confidence 9999999999999753 4 89999999999999999999999999988743 10000 0
Q ss_pred hhccCCCcccCCCCCccCccccccCCCChh-HHHHHHHHHHHHHHHHhhccc-----hhHHHHHHHHHHHHHHhcCcccc
Q 008018 263 VTAANGTASLIPGGTVSGDILCLRDRMESP-TFWLGVVGFVIIAYCLVKNIK-----GAMIYGVVFVTVVSWFRNTKVTA 336 (581)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~llglvgl~iiivl~~~~v~-----gaiLigIi~gtila~~~G~~v~~ 336 (581)
.+++.++ ..+++++++++++++. +..| -++|+|+++||++++++|. +|
T Consensus 167 -----------------------~~~~~~~~~l~la~~tl~~il~~~-~f~~g~~~~i~ILiGlv~G~~la~~~G~--vd 220 (451)
T COG2233 167 -----------------------NPDFGSLENLGLALVTLLIILLIN-RFGKGFLRRIPILIGLVVGYLLALFMGM--VD 220 (451)
T ss_pred -----------------------CcccCchhHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHhCC--cC
Confidence 0123344 3457777776665553 2222 4799999999999999997 78
Q ss_pred CCCCCcCCccccccccceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCC-ccCcC
Q 008018 337 FPDTDAGNSAHKYFKKVVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGD-FEGQY 415 (581)
Q Consensus 337 ~p~~~vg~~~~~~~~~~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~-~~~~~ 415 (581)
+.. +.+ ++|+.+|++.++..+||+..+ ..++...++.+.|++|+..++++.+| |+.+ +++++
T Consensus 221 f~~--v~~------a~w~~~P~~~~fg~~F~~~ai------l~m~~v~iV~~~E~~G~i~A~~~itg---~~~~~~~~l~ 283 (451)
T COG2233 221 FSG--VAE------APWFALPTPFYFGMAFDWGAI------LTMLPVAIVTIVEHTGDITATGEITG---RDLDGKPRLR 283 (451)
T ss_pred ccc--ccc------CceeeCCcccCCCeeecHHHH------HHHHHHHHHHHHHHhhhhhhHHhHhC---CcCccCcccc
Confidence 765 344 489999998753336777654 45666788899999999999998654 5555 49999
Q ss_pred hhhhhhhHHHHHhhhcCCCccccchhhhhhhhcccccchhH---HHHHHHHHHHHHHHH----HHhhcChHHHHHH-HHH
Q 008018 416 FAFMSDAMSIVVGALLGTSPVTTFIESSTGIREGGRTGLTA---LTVAGYFFLALFFTP----LLASIPAWAVGPP-LIL 487 (581)
Q Consensus 416 ~~LiadGlanivgglfG~~PvTsf~eSaa~v~aGarTglsa---vv~g~~fll~lfl~P----li~~IP~aalaga-LIl 487 (581)
|.+++||++++++++||++|.|+|+||.+-++ -||..+ +..+.++++++.+.| +++.||.+|+||+ +++
T Consensus 284 rg~~aDGlat~iag~fg~~p~TtfaqNiGvv~---lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivm 360 (451)
T COG2233 284 RGLLADGLATLIAGLFGGFPNTTFAQNIGVVA---LTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVL 360 (451)
T ss_pred cceeeccHHHHHHHhcCCCCCCchhhceeeee---eccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHH
Confidence 99999999999999999999999999998887 466543 555666666666666 8999999999999 679
Q ss_pred HHHHHHHHhhc---ccccc-ccchhhHHHHHH------HHHHHHH---------HHHHHHHHHHHHHHHHHHH
Q 008018 488 VGVLMMRSVVE---IEWDD-MRQAIPAFLTLI------LMPLTYS---------IAYGLIGGICTYIVLHIWD 541 (581)
Q Consensus 488 vG~~m~~~l~~---I~~~~-~~e~ipaf~tiv------~~plt~s---------I~~GI~~G~i~yvil~l~~ 541 (581)
+|.+..+++|. .|.++ +++.+...+.+. ..|-.|. ..+|+++|.++.+++|++.
T Consensus 361 FG~Ia~sGir~l~~~~~~~~~~Nl~IvAvsl~~Gig~~~~p~~~~~~p~~~~~l~~sGia~g~i~AIvLNlll 433 (451)
T COG2233 361 FGMIAASGIRILIRNKVDRSRRNLLIVAVSLGLGIGVGAVPEVFLQLPAWLRPLLSSGIALGTLTAIVLNLLL 433 (451)
T ss_pred HHHHHHHHHHHHHhcccccCccceeeehHHHHhCcchhcCchhhhhCcHHHHHHHhccHHHHHHHHHHHHHhc
Confidence 99998877654 44444 325443322221 1122222 6899999999999999886
No 8
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-37 Score=340.70 Aligned_cols=355 Identities=19% Similarity=0.305 Sum_probs=266.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccc-ccCcccchhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhHhhhhhcc
Q 008018 130 VATVASSLIGCVIMGAFANLPLAL-APGMGTNAYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISAIGFRSKLAKLV 208 (581)
Q Consensus 130 ~At~l~agigtLl~gl~a~lP~~l-~pgmGl~a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~~~l~~~l~~~i 208 (581)
.+.+.++.++.++.++++..|..+ || .|..+...+.++..+. +.+|+.++.+++++|++++++|++|++ ++.||+
T Consensus 51 ~~GLyas~i~~~v~alfGgs~~~i~GP-t~a~~~v~a~~i~~~~--~~g~~~~~~~tllaGv~~i~~G~lRLG-~li~fi 126 (554)
T COG0659 51 EAGLYASIVAGIIYALFGGSRGLISGP-TGAFAVVLAAVIASLV--ETGLALAFLATLLAGVFQILLGLLRLG-RLIRFI 126 (554)
T ss_pred HHHHHHHHHHHHHHHHHcCCccceecc-chhhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhc
Confidence 566788999999999999999988 56 4545555555555111 256999999999999999999999997 699999
Q ss_pred ChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhhccCCCcccCCCCCccCccccccCC
Q 008018 209 PKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVTAANGTASLIPGGTVSGDILCLRDR 288 (581)
Q Consensus 209 P~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (581)
|++|..|+++|||++|+..|++... |+-......+..+...+ .....
T Consensus 127 p~pVl~Gf~~Giai~I~~~Ql~~~~--G~~~~~~~~~~~~~~l~-------------------------------~~~~~ 173 (554)
T COG0659 127 PRPVLIGFTAGIAILIILTQLPVLL--GLASKVSGFWAKVSALF-------------------------------TVLLT 173 (554)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccchHHHHHHHH-------------------------------Hhccc
Confidence 9999999999999999999999874 44332211111111100 01124
Q ss_pred CChhHHHHHHHHHHHHHHHH--hhccchhHHHHHHHHHHHHHHhcCccccCCCCCcCCccccccccceeccccchhhccc
Q 008018 289 MESPTFWLGVVGFVIIAYCL--VKNIKGAMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSAHKYFKKVVDVHVIESTAGAL 366 (581)
Q Consensus 289 ~~~p~~llglvgl~iiivl~--~~~v~gaiLigIi~gtila~~~G~~v~~~p~~~vg~~~~~~~~~~~~lP~~~~~~~~f 366 (581)
.+.++..++++++.+++.+- .+++|++ +++++++|.++|.++.+..+.. .+.++. +. .+|++. .+++
T Consensus 174 ~~~~~~~lg~~~l~il~~~~~~~~~~P~~-liaiv~~t~i~~~~~~~~~~~G-~i~~~l----p~---~~~~~~--~P~~ 242 (554)
T COG0659 174 INLATLLLGLLTLAILLFLPRLTPRIPSP-LIALVLGTLIVWIFPLDSLRYG-EIPGSL----PS---GLPHFR--LPNV 242 (554)
T ss_pred ccHHHHHHHHHHHHHHHHccchhhhCCcH-HHHHHHHHHHHHHhcCCchhcc-cCcccC----Cc---CCCccc--CCCC
Confidence 56667778888877776663 3567876 9999999999999986321121 111211 00 122221 2344
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhhcCCCccc-cchhhhhh
Q 008018 367 SFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGALLGTSPVT-TFIESSTG 445 (581)
Q Consensus 367 d~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivgglfG~~PvT-sf~eSaa~ 445 (581)
+++.+ .++++..+++.++.++|+..|..+.+++ ++++.|.|||++|||++|+++++||++|.| +|+||+.|
T Consensus 243 ~~~~~--~~l~~~al~la~lg~iesllta~~~~~~------~~~~~d~nrELiaqGiaNi~sglfgg~p~~g~~srS~~n 314 (554)
T COG0659 243 SLSLL--LALLPYALALALLGLLESLLTAVSFDGM------TGTKHDSNRELIAQGIANIASGLFGGIPATGSISRSAIN 314 (554)
T ss_pred CHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCCCCCHHHHHhhHHHHHHHHhCCccccchhHHHHHH
Confidence 55544 3577888899999999999999998875 345889999999999999999999999999 68999999
Q ss_pred hhcccccchhHHHHHHHHH-HHHHHHHHHhhcChHHHHHHHHHHHHHHHH--Hhhcc-ccccccchhhHHHHHHHHHHHH
Q 008018 446 IREGGRTGLTALTVAGYFF-LALFFTPLLASIPAWAVGPPLILVGVLMMR--SVVEI-EWDDMRQAIPAFLTLILMPLTY 521 (581)
Q Consensus 446 v~aGarTglsavv~g~~fl-l~lfl~Pli~~IP~aalagaLIlvG~~m~~--~l~~I-~~~~~~e~ipaf~tiv~~plt~ 521 (581)
+++||||+++++++|++++ +.+++.|++++||.++++++++++|+-|.. .+++. .+..+.|.+.+++|++.+ ..+
T Consensus 315 v~sGarT~lsgi~~a~~lll~l~~~~~~~~~IP~a~Laavli~v~~~l~~~~~~~~~~~~~~~~e~~v~~~t~~~t-v~~ 393 (554)
T COG0659 315 IKSGARTRLSGIIHAALLLLLLLFLAPLVSYIPLAALAAVLILVGWGLLDWSLLKPLLRKLPRGELLVLLTTALLT-VFF 393 (554)
T ss_pred HHhCCcChHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhccHHHHHHHHhcCCchhHHHHHHHHHHH-HHH
Confidence 9999999999999999988 556789999999999999999999999973 44442 335567777777666654 456
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 008018 522 SIAYGLIGGICTYIVLHIWD 541 (581)
Q Consensus 522 sI~~GI~~G~i~yvil~l~~ 541 (581)
++..||.+|++.+.+..+..
T Consensus 394 ~l~~GV~vGi~ls~~~~i~r 413 (554)
T COG0659 394 DLVIGVVVGILLACLLFIRR 413 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887765444
No 9
>PRK11660 putative transporter; Provisional
Probab=100.00 E-value=9.7e-34 Score=317.26 Aligned_cols=358 Identities=16% Similarity=0.235 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHHHHHhCCcccc-ccCcccchhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhHhhhhhccCh
Q 008018 132 TVASSLIGCVIMGAFANLPLAL-APGMGTNAYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISAIGFRSKLAKLVPK 210 (581)
Q Consensus 132 t~l~agigtLl~gl~a~lP~~l-~pgmGl~a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~~~l~~~l~~~iP~ 210 (581)
.+.++.+++++.++++..|..+ ||...+... ...++.. ++++.++.+++++|++|+++|++|++ ++.|++|+
T Consensus 61 GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~-~~~~~~~-----~~~~~~~~~~~l~Gii~~l~gllrlG-~l~~fip~ 133 (568)
T PRK11660 61 GLYTAAVAGIVIALTGGSRFSVSGPTAAFVVI-LYPVSQQ-----FGLAGLLVATLMSGIILILMGLARLG-RLIEYIPL 133 (568)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccChhHHHHHH-HHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHhhh-HHHhcCcH
Confidence 5788899999999999988776 675443222 2233333 45777888999999999999999997 69999999
Q ss_pred hhhhhhhhhHHHHHHHHhhcccccccccccC-ccchh-hccCCccchhccccchhhccCCCcccCCCCCccCccccccCC
Q 008018 211 PVRISSSAGIGLFLAFIGLQNNQGIGLIGYS-SSTLV-TLGACPRSARAALAPVVTAANGTASLIPGGTVSGDILCLRDR 288 (581)
Q Consensus 211 ~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~-~~t~~-~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (581)
+|+.|+++|+|++|+..|+++. +|+...+ +.+++ .+.. +....++
T Consensus 134 pVi~Gf~~g~al~I~~~Ql~~~--lG~~~~~~~~~~~~~l~~-------------------------------~~~~l~~ 180 (568)
T PRK11660 134 SVTLGFTSGIGIVIATLQIKDF--FGLQMAHVPEHYLEKVGA-------------------------------LFQALPT 180 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--cCCCCCCCCccHHHHHHH-------------------------------HHHhhcc
Confidence 9999999999999999999988 3564321 11111 0000 0011245
Q ss_pred CChhHHHHHHHHHHHHHHH--HhhccchhHHHHHHHHHHHHHHhcCccccCCCCCcCCcc-ccc---cccce---ecccc
Q 008018 289 MESPTFWLGVVGFVIIAYC--LVKNIKGAMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSA-HKY---FKKVV---DVHVI 359 (581)
Q Consensus 289 ~~~p~~llglvgl~iiivl--~~~~v~gaiLigIi~gtila~~~G~~v~~~p~~~vg~~~-~~~---~~~~~---~lP~~ 359 (581)
.+.++.+++++++++++++ ..+|+|++ ++++++++++++.++.. +.+...+++.. +.. ..++. .+|++
T Consensus 181 ~~~~~~~~~~~~l~lll~~~~~~~~iP~~-li~iiv~t~~~~~~~~~--~~~v~~vg~~~~~~~~~g~~~~~ip~~~p~~ 257 (568)
T PRK11660 181 INWGDALIGIVTLGVLILWPRLKIRLPGH-LPALLAGTAVMGVLNLL--GGHVATIGSRFHYVLADGSQGNGIPPLLPQF 257 (568)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcccCchH-HHHHHHHHHHHHHHhcc--CCCceeecccccccccccccccCCCCCCCCC
Confidence 6777888888888777776 34567877 88999999999988752 11111112100 000 00000 12222
Q ss_pred chh---------hcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhh
Q 008018 360 EST---------AGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGAL 430 (581)
Q Consensus 360 ~~~---------~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivggl 430 (581)
..+ +.++||+.+. .+++..+++.++.++|++.+..+.+++ ++++.|.|||++++|++|+++++
T Consensus 258 ~~p~~~~~~~~~~~~~~~~~~~--~ll~~a~~iaiv~~iesl~~~~~~~~~------~~~~~d~n~EL~a~G~aNi~~~~ 329 (568)
T PRK11660 258 VLPWNLPGADGQPFTLSWDLIR--ALLPAAFSMAMLGAIESLLCAVVLDGM------TGTKHSANSELVGQGLGNIVAPF 329 (568)
T ss_pred CCCccccccccccCCcCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCCCCcHHHHHHhHHHHHHHH
Confidence 100 1124555442 456777888888999998777777654 34567899999999999999999
Q ss_pred cCCCccccc-hhhhhhhhcccccchhHHHHHHHHHHH-HHHHHHHhhcChHHHHHHHHHHHHHHHHH--hhccccc-ccc
Q 008018 431 LGTSPVTTF-IESSTGIREGGRTGLTALTVAGYFFLA-LFFTPLLASIPAWAVGPPLILVGVLMMRS--VVEIEWD-DMR 505 (581)
Q Consensus 431 fG~~PvTsf-~eSaa~v~aGarTglsavv~g~~fll~-lfl~Pli~~IP~aalagaLIlvG~~m~~~--l~~I~~~-~~~ 505 (581)
||++|.+++ +||+.|.++||||+++++++++++++. +++.|++++||.++++++++++|+.|+.. +++..|+ ++.
T Consensus 330 fgg~p~~~s~srSa~n~~aGarT~la~iv~a~~~ll~ll~l~~ll~~iP~~vLa~ili~~~~~m~~~~~~~~~~~~~~~~ 409 (568)
T PRK11660 330 FGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKD 409 (568)
T ss_pred hCcccccchHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhhHHHHHHHHHhCCHH
Confidence 999999965 899999999999999999999999855 68999999999999999999999999843 4444343 345
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 506 QAIPAFLTLILMPLTYSIAYGLIGGICTYIVLHIWD 541 (581)
Q Consensus 506 e~ipaf~tiv~~plt~sI~~GI~~G~i~yvil~l~~ 541 (581)
|...++.+++ +.+.+++..|+++|++.++++.++.
T Consensus 410 d~~~~~~~~~-~~~~~~~~~gi~~Gi~~s~~~~~~~ 444 (568)
T PRK11660 410 DIIVMLLCMS-LTVLFDMVIAISVGIVLASLLFMRR 444 (568)
T ss_pred HHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 6555554444 4566799999999999998876654
No 10
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=4e-33 Score=302.01 Aligned_cols=381 Identities=16% Similarity=0.183 Sum_probs=263.5
Q ss_pred hHHHHHhHHHHHHHHHHHhhhhhhhhcc-CCCcccccccccCCCCCCCCCccCCCCCCccccCCCCcCCCCCCCCCcchh
Q 008018 42 TTELRAGTATFLTMAYILAVNASIIADS-GGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQPDESCKFNPVNPGYQSC 120 (581)
Q Consensus 42 ~~ei~aG~~tflam~yi~~vnp~il~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (581)
+|.+..|+||+++|+-..++.|.+++++ |++ +
T Consensus 8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~-------------------------------~---------------- 40 (433)
T PRK11412 8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLP-------------------------------Q---------------- 40 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------------------------------H----------------
Confidence 3689999999999999999999999987 664 1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHH-HhCCccccccCcccchhhhhhhhhccCCCC--chHHHHHH----HHHHHHHHHH
Q 008018 121 LEKLRKDLIVATVASSLIGCVIMGA-FANLPLALAPGMGTNAYFAYTVVGFHGSGN--VSYRSALT----AVFMEGLIFL 193 (581)
Q Consensus 121 ~~~~~~~li~At~l~agigtLl~gl-~a~lP~~l~pgmGl~a~~a~~vv~~~G~~~--~~~~~alg----av~laGii~l 193 (581)
++...+++++++++|++|++|++ ..|+|+.++|+ .+|+.-.+........ ..++..++ +.+++|++++
T Consensus 41 --~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~S---f~~~~~~~~i~~~~~~~g~~~~~~~g~l~g~~i~~g~~~~ 115 (433)
T PRK11412 41 --SSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPG---GLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVVTI 115 (433)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCc---hHHHHHHHHHHhcccccCccHHHHHHHHHHHHHHHHHHHH
Confidence 34789999999999999999985 58999999997 4444311111111011 33667766 5999999999
Q ss_pred HHHhhhhHhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhhccCCCcccC
Q 008018 194 FISAIGFRSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVTAANGTASLI 273 (581)
Q Consensus 194 llg~~~l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~ 273 (581)
++++.++.+|++|+|||.|...+..-||+.++..++++..| ....... +.
T Consensus 116 ~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G--~~~~~~~---~~------------------------- 165 (433)
T PRK11412 116 LIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLG--LPFGIAD---PN------------------------- 165 (433)
T ss_pred HHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcC--CCccCcc---cc-------------------------
Confidence 99999988899999999999999999999999999987632 1000000 00
Q ss_pred CCCCccCccccccCCCChhHHHHHHHHHHHHHHHHh--hc-c-chhHHHHHHHHHHHH-HHhcCccccCCCCCcCCcccc
Q 008018 274 PGGTVSGDILCLRDRMESPTFWLGVVGFVIIAYCLV--KN-I-KGAMIYGVVFVTVVS-WFRNTKVTAFPDTDAGNSAHK 348 (581)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~p~~llglvgl~iiivl~~--~~-v-~gaiLigIi~gtila-~~~G~~v~~~p~~~vg~~~~~ 348 (581)
++.+.....+++..+.+++.+.. |+ . ..++|+|+++||+++ +.+|. |+.. +++.
T Consensus 166 -------------~~~~~~~~~~a~~~l~~il~~~~~~~g~~~~~svLiGiv~G~v~a~~~~g~---d~~~--v~~a--- 224 (433)
T PRK11412 166 -------------GKIQLPPFGLSVAVMCLVLAMIIFLPQRIARYSLLVGTIVGWILWAFCFPS---SHSL--SGEL--- 224 (433)
T ss_pred -------------cccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCC---Ccch--hccC---
Confidence 01111223355555544444321 21 1 248899999999985 46664 4442 2332
Q ss_pred ccccceeccccchhhc-ccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCC-ccCcChhhhhhhHHHH
Q 008018 349 YFKKVVDVHVIESTAG-ALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGD-FEGQYFAFMSDAMSIV 426 (581)
Q Consensus 349 ~~~~~~~lP~~~~~~~-~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~-~~~~~~~LiadGlani 426 (581)
+|..+| +. .+ +||+..+ ..++...++.+.|++|+..++++.. |++.+ +++++|.+.+||++++
T Consensus 225 ---~w~~~p-fG--~P~~F~~~~i------l~~~~~~lv~~~e~iG~~~a~~~~~---~~~~~~~~~l~rgi~~dGi~s~ 289 (433)
T PRK11412 225 ---HWQWFP-LG--SGGALEPGII------LTAVITGLVNISNTYGAIRGTDVFY---PQQGAGNTRYRRSFVATGFMTL 289 (433)
T ss_pred ---Cceeec-CC--CCCccCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHh---CCCCCCCcccccchhhccHHHH
Confidence 454333 21 22 3776643 3455567788999999999998754 44544 6799999999999999
Q ss_pred HhhhcCCCccccchhhhhhhhc-ccccchhHHHHHHHHHHHHHHHH----HHhhcChHHHHHHH-HHHHHHHHHHh---h
Q 008018 427 VGALLGTSPVTTFIESSTGIRE-GGRTGLTALTVAGYFFLALFFTP----LLASIPAWAVGPPL-ILVGVLMMRSV---V 497 (581)
Q Consensus 427 vgglfG~~PvTsf~eSaa~v~a-GarTglsavv~g~~fll~lfl~P----li~~IP~aalagaL-IlvG~~m~~~l---~ 497 (581)
++++||++|+|+|+||++-++. |-++|.. +..+..+++.+.|.| +++.||.+++|+++ +++|.+...++ +
T Consensus 290 laglfg~~p~tt~sqNvGvi~~TgV~SR~v-~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l~ 368 (433)
T PRK11412 290 ITVPLAVIPFSPFVSSIGLLTQTGDYRRRS-FIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFSQ 368 (433)
T ss_pred HHHhcCCCCCCchhhhhhhhhhcCCchhHH-HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988874 2233332 444555555555555 79999999999995 68888876544 5
Q ss_pred ccccccccchhhHHHHHH-----HHHH-H---------HHHHHHHHHHHHHHHHHHHHH
Q 008018 498 EIEWDDMRQAIPAFLTLI-----LMPL-T---------YSIAYGLIGGICTYIVLHIWD 541 (581)
Q Consensus 498 ~I~~~~~~e~ipaf~tiv-----~~pl-t---------~sI~~GI~~G~i~yvil~l~~ 541 (581)
+.|+++|+-.+..+-..+ ..|- . .=+.+|+..|.++.+++|...
T Consensus 369 ~~~~~~rn~~ivg~sl~~Glg~~~~p~~~~~~~P~~~~~~l~sgi~~g~l~AilLn~~~ 427 (433)
T PRK11412 369 QITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMENLI 427 (433)
T ss_pred hCCCCcccchhhHHHHHHHhhHHhCCHHHHHHChHHHHHHHcCcHHHHHHHHHHHHhhc
Confidence 667775543333321111 1120 1 125689999999999998775
No 11
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=100.00 E-value=5.9e-31 Score=294.58 Aligned_cols=356 Identities=16% Similarity=0.188 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHHHHHhCCcccc-ccCcccchhhhhhhhhccCCCC----chHHHHHHHHHHHHHHHHHHHhhhhHhhhhh
Q 008018 132 TVASSLIGCVIMGAFANLPLAL-APGMGTNAYFAYTVVGFHGSGN----VSYRSALTAVFMEGLIFLFISAIGFRSKLAK 206 (581)
Q Consensus 132 t~l~agigtLl~gl~a~lP~~l-~pgmGl~a~~a~~vv~~~G~~~----~~~~~algav~laGii~lllg~~~l~~~l~~ 206 (581)
.+.++.+..++.++++..|..+ ||.. ..+.....++..++... ..++.+..+++++|++++++|++|++ ++.+
T Consensus 46 GLysa~~~~iv~alfGss~~~i~Gp~a-~~sl~~~~~v~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrlG-~l~~ 123 (563)
T TIGR00815 46 GLYTSFVPPFIYALFGTSRDIAIGPVA-VMSLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLG-FLIE 123 (563)
T ss_pred hhHHHHHHHHHhheecCCCcccCCHHH-HHHHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHH
Confidence 4678999999999999988877 6643 34444445555554211 24677889999999999999999997 7999
Q ss_pred ccChhhhhhhhhhHHHHHHHHhhcccccccccccCc-cchh-hccCCccchhccccchhhccCCCcccCCCCCccCcccc
Q 008018 207 LVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSS-STLV-TLGACPRSARAALAPVVTAANGTASLIPGGTVSGDILC 284 (581)
Q Consensus 207 ~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~-~t~~-~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (581)
++|++|+.|+++|+|+.|+..|++++. |+-..++ ..+. .+. +.+.
T Consensus 124 ~is~~Vi~Gf~~g~a~~i~~~Ql~~~~--G~~~~~~~~~~~~~~~-------------------------------~~~~ 170 (563)
T TIGR00815 124 FLSHAVISGFMTGAAITIGLSQLKGLL--GISIFNTRTDTLGVVI-------------------------------STWA 170 (563)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHh--CCCCCCCCCChHHHHH-------------------------------HHHH
Confidence 999999999999999999999999984 5432111 1100 000 0000
Q ss_pred ccCC---CChhHHHHHHHHHHHHHHHH--hhccc-------hhHHHHHHHHHHHHHHhcCccccCCCCCcCCcccccccc
Q 008018 285 LRDR---MESPTFWLGVVGFVIIAYCL--VKNIK-------GAMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSAHKYFKK 352 (581)
Q Consensus 285 ~~~~---~~~p~~llglvgl~iiivl~--~~~v~-------gaiLigIi~gtila~~~G~~v~~~p~~~vg~~~~~~~~~ 352 (581)
..++ ++.++..++++.++++..+. .+|.| ...|+.+++++++++.++.+ +..-..+|+. +.
T Consensus 171 ~l~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~--~~~~~~~g~i----p~- 243 (563)
T TIGR00815 171 GLPNTHNWNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHK--KQGVSILGHI----PS- 243 (563)
T ss_pred HhhhccccchHHHHHHHHHHHHHHHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHccC--CCCeEEEeec----CC-
Confidence 1112 36666667776665554432 12221 23488899999888877431 1111112211 11
Q ss_pred ceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhhcC
Q 008018 353 VVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGALLG 432 (581)
Q Consensus 353 ~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivgglfG 432 (581)
++|.+. .+.+|++.+ ..+++..+++.++.++|++.+.++++++ ++++.|.|||++++|++|+++++||
T Consensus 244 --g~p~~~--~~~~~~~~~--~~l~~~a~~ia~v~~~e~l~~a~~~~~~------~~~~~d~n~El~a~G~~N~~~~~fg 311 (563)
T TIGR00815 244 --GLSFFP--PITLDWELL--PTLAPDAIAIAIVGLIESIAIARSFARM------TGYKIDANQELVAQGIANIVGSFFS 311 (563)
T ss_pred --CCCCCC--CCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH------hCCCCCCcHHHHHhhHHHHHHHHhC
Confidence 123222 234566544 2567788889999999999999998874 4567899999999999999999999
Q ss_pred CCccc-cchhhhhhhhcccccchhHHHHHHHHH-HHHHHHHHHhhcChHHHHHHHHHHHHHHH--HHhhccccccccchh
Q 008018 433 TSPVT-TFIESSTGIREGGRTGLTALTVAGYFF-LALFFTPLLASIPAWAVGPPLILVGVLMM--RSVVEIEWDDMRQAI 508 (581)
Q Consensus 433 ~~PvT-sf~eSaa~v~aGarTglsavv~g~~fl-l~lfl~Pli~~IP~aalagaLIlvG~~m~--~~l~~I~~~~~~e~i 508 (581)
++|.+ +++||+.|.++||||++++++++++++ +.+++.|+++++|.++++++++++++.|. +.++++...++.|.+
T Consensus 312 ~~p~~~s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~l~~~~~~~~~~~~~~~d~~ 391 (563)
T TIGR00815 312 CYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRGLIDYKELYKLWKADKMDFV 391 (563)
T ss_pred ccCCCCcchHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhcccCHHHHHHHHcCCHHHHH
Confidence 99999 789999999999999999999999987 45778999999999999999999999875 344555444577888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 509 PAFLTLILMPLTYSIAYGLIGGICTYIVLHIWDW 542 (581)
Q Consensus 509 paf~tiv~~plt~sI~~GI~~G~i~yvil~l~~~ 542 (581)
..++|++.+.+ +++..|+.+|++.+++..++..
T Consensus 392 i~~~~~~~~~~-~~~~~Gi~vGv~~s~~~~~~~~ 424 (563)
T TIGR00815 392 VWLVTFFGVVF-TSIEIGLLVGVALSAAFLLLRI 424 (563)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence 77777766544 5899999999998888777663
No 12
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=99.92 E-value=2.2e-23 Score=236.92 Aligned_cols=353 Identities=18% Similarity=0.213 Sum_probs=237.4
Q ss_pred HHHHHHHHHHHHHHHH-hCCccccccCcccchhhhhhhh---h----ccC---CCCchHHHHHHHHHHHHHHHHHHHhhh
Q 008018 131 ATVASSLIGCVIMGAF-ANLPLALAPGMGTNAYFAYTVV---G----FHG---SGNVSYRSALTAVFMEGLIFLFISAIG 199 (581)
Q Consensus 131 At~l~agigtLl~gl~-a~lP~~l~pgmGl~a~~a~~vv---~----~~G---~~~~~~~~algav~laGii~lllg~~~ 199 (581)
-.+-++.++.++..++ +-.++.+|| .+..+..+- . ... .....++.+...+|++|++|+++|++|
T Consensus 111 yGLYssf~~~~iY~~fGtsr~isiG~----~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt~l~Giiq~~mG~lr 186 (665)
T KOG0236|consen 111 YGLYSSFFPPLIYAIFGTSRHVSIGP----FAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLTFLTGIIQLILGLLR 186 (665)
T ss_pred HHHHHHHHHHHHheeccCCCcccccH----HHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456788888888865 346677666 333332221 1 111 013579999999999999999999999
Q ss_pred hHhhhhhccChhhhhhhhhhHHHHHHHHhhccccccccc-ccCccchhhccCCccchhccccchhhccCCCcccCCCCCc
Q 008018 200 FRSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLI-GYSSSTLVTLGACPRSARAALAPVVTAANGTASLIPGGTV 278 (581)
Q Consensus 200 l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Gii-v~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (581)
++ ++.+|+|+++..|++.|.++.|...|++... |+- ..........-.
T Consensus 187 LG-fl~~~lS~~~l~GFt~gaa~~I~~sQlk~ll--Gi~~~~~~~~~~~~~~---------------------------- 235 (665)
T KOG0236|consen 187 LG-FLVRFLSEPALSGFTTGAALHIVTSQLKVLL--GITSFPRHSGPGSIVF---------------------------- 235 (665)
T ss_pred cC-hHHHHccHHHHhHhhhhhhhhhhHHhhHhhc--cccccCCCCCceeEEE----------------------------
Confidence 95 8999999999999999999999999999984 554 111100000000
Q ss_pred cCccccccCCCC--hhHHHHHHHHHHHHHHHH--h----hccc----hhHHHHHHHHHHHHHHhcCccccCCCCCcCCcc
Q 008018 279 SGDILCLRDRME--SPTFWLGVVGFVIIAYCL--V----KNIK----GAMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSA 346 (581)
Q Consensus 279 ~~~~~~~~~~~~--~p~~llglvgl~iiivl~--~----~~v~----gaiLigIi~gtila~~~G~~v~~~p~~~vg~~~ 346 (581)
.+.....+.. .....++++.+++..... . ++.+ ..-++.++++|++++.+..+.. .....+++.
T Consensus 236 --~~~~~~~~~~~~~~~~~~~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~-~~~~~~~~i- 311 (665)
T KOG0236|consen 236 --IVFDLLANLPKTLATLVLSLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGR-YGPIIVGEI- 311 (665)
T ss_pred --eeHHhhhcccccchhhhhHHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccc-cCCeeeccC-
Confidence 0000000111 123445555544433322 1 1222 1348999999999999876311 111111221
Q ss_pred ccccccceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHH
Q 008018 347 HKYFKKVVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIV 426 (581)
Q Consensus 347 ~~~~~~~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlani 426 (581)
+ . ++|++. .+.+++.. ..+...+++.++.+.|++...++.+++ ++..-|.||||+|.|++|+
T Consensus 312 ---~-~--g~~~~~--lp~~~~~~----~~~~~~~~i~iva~~~~iai~k~fa~~------~~y~vd~nqELiAlG~~Ni 373 (665)
T KOG0236|consen 312 ---P-R--GFPPPS--LPPLSLTP----QVIPDAFAIAIVALLEHIAIGKSFASL------HGYKVDSNQELIALGISNI 373 (665)
T ss_pred ---C-C--CCCCCC--CCChhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHH------hCCeeCCChHHHHHHHHHH
Confidence 1 1 122221 22222222 234456667788899998888887764 4556788999999999999
Q ss_pred HhhhcCCCccc-cchhhhhhhhcccccchhHHHHHHHHHH-HHHHHHHHhhcChHHHHHHHHHHHHHHHHH---hhcccc
Q 008018 427 VGALLGTSPVT-TFIESSTGIREGGRTGLTALTVAGYFFL-ALFFTPLLASIPAWAVGPPLILVGVLMMRS---VVEIEW 501 (581)
Q Consensus 427 vgglfG~~PvT-sf~eSaa~v~aGarTglsavv~g~~fll-~lfl~Pli~~IP~aalagaLIlvG~~m~~~---l~~I~~ 501 (581)
+|++|+++|.| +|+||+.+.++|+||++++++.+++.++ .+++.|++++||.++++.+.+..+.-|+.. +++++.
T Consensus 374 ~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~~~~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~lwr 453 (665)
T KOG0236|consen 374 LSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVSAALVLLALLFLGPLFYYIPKCVLAAIIISALIGMLIQLEDLKPLWR 453 (665)
T ss_pred hhhhhceEcccchhhHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhhhee
Confidence 99999999998 7999999999999999999999999884 567899999999999998877666655544 444444
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 502 DDMRQAIPAFLTLILMPLTYSIAYGLIGGICTYIVLHIWD 541 (581)
Q Consensus 502 ~~~~e~ipaf~tiv~~plt~sI~~GI~~G~i~yvil~l~~ 541 (581)
.++.|.++.+.|.+.+ +.+++..|+.+|+...++.-+..
T Consensus 454 ~~k~D~~~~~~t~~~~-i~~~ve~Glligv~~s~~~ii~~ 492 (665)
T KOG0236|consen 454 LSKIDLLIWVVTFFTT-IFLSLEIGLLIGVAFSLFFIILR 492 (665)
T ss_pred CCHHHHHHHHHHhhee-eEehhhhhHHHHHHHHHHHHHHH
Confidence 5688888887777654 34588999999988877765554
No 13
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.91 E-value=2.2e-24 Score=220.36 Aligned_cols=260 Identities=22% Similarity=0.302 Sum_probs=178.0
Q ss_pred HHhhhhHhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccc-cCccchhhccCCccchhccccchhhccCCCcccC
Q 008018 195 ISAIGFRSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIG-YSSSTLVTLGACPRSARAALAPVVTAANGTASLI 273 (581)
Q Consensus 195 lg~~~l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv-~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~ 273 (581)
+|++|++ ++.|++|++|..|++.|+|++|+..|+++.. |+-. .+.......-
T Consensus 1 lGllrlG-~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~--G~~~~~~~~~~~~~~------------------------ 53 (280)
T PF00916_consen 1 LGLLRLG-FLVRFIPRPVISGFLAGIAILIIFSQLPNLL--GIPVVPSHEGLFSFI------------------------ 53 (280)
T ss_pred Ccccccc-HHHHHccHHHHHHHHHHHHHHHHHHHHHHHH--hcccccccccccchh------------------------
Confidence 3677885 7999999999999999999999999999884 4431 1111100000
Q ss_pred CCCCccCccccccCC-CChhHHHHHHHHHHHHHHH--Hh--------hccchhHHHHHHHHHHHHHHhcCccccCCCCCc
Q 008018 274 PGGTVSGDILCLRDR-MESPTFWLGVVGFVIIAYC--LV--------KNIKGAMIYGVVFVTVVSWFRNTKVTAFPDTDA 342 (581)
Q Consensus 274 ~~~~~~~~~~~~~~~-~~~p~~llglvgl~iiivl--~~--------~~v~gaiLigIi~gtila~~~G~~v~~~p~~~v 342 (581)
+++.+..++ .+.+...+++..+++.... .. ++.|. .++.+++++++++.++.+..+++. +
T Consensus 54 ------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~p~-~li~vv~~~~~~~~~~~~~~~v~~--~ 124 (280)
T PF00916_consen 54 ------RALFQLISTITNWPTLAIGLVALVFLLIIRLLPKRLPSRFWPPIPA-PLIVVVLGTLLSWLFLLDKYGVAI--V 124 (280)
T ss_pred ------hhhhhhhhhccchhhhhhhhHHHHHHhhhhhhhhhccccccccccc-cceeeehhhhhhhhhhhccccccc--c
Confidence 000111112 2444455555554443332 11 11233 478889999988887542212211 2
Q ss_pred CCccccccccceeccccchhhc--ccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhh
Q 008018 343 GNSAHKYFKKVVDVHVIESTAG--ALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMS 420 (581)
Q Consensus 343 g~~~~~~~~~~~~lP~~~~~~~--~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~Lia 420 (581)
++. +. .+|++. ++ ++|++.+. ..++..+++.++.++|++.+.++++++ ++++.|.|||+++
T Consensus 125 ~~i----~~---~lp~~~--~p~~~~~~~~~~--~~~~~a~~ia~v~~~~s~~~~~~~~~~------~~~~~d~n~El~a 187 (280)
T PF00916_consen 125 GEI----PS---GLPPPS--LPSFDISWSLIL--DLLPTALAIAIVGFIESLLIAKSIAKK------TGYRIDPNQELIA 187 (280)
T ss_pred ccc----cc---cCcccc--Cccccccccccc--ccchhHHHHHHHHHHHHHHhhhhhccc------ccccCCcHHHHHH
Confidence 322 11 244433 22 45555442 355667788889999999988887653 4566799999999
Q ss_pred hhHHHHHhhhcCCCccc-cchhhhhhhhcccccchhHHHHHHHHH-HHHHHHHHHhhcChHHHHHHHHHHHHHHH--HHh
Q 008018 421 DAMSIVVGALLGTSPVT-TFIESSTGIREGGRTGLTALTVAGYFF-LALFFTPLLASIPAWAVGPPLILVGVLMM--RSV 496 (581)
Q Consensus 421 dGlanivgglfG~~PvT-sf~eSaa~v~aGarTglsavv~g~~fl-l~lfl~Pli~~IP~aalagaLIlvG~~m~--~~l 496 (581)
+|++|+++++||++|.+ +++||+.|.++||||++++++++++.+ +.+++.|++++||.++++++++++|+.++ ..+
T Consensus 188 ~G~aNi~s~~~gg~p~~~s~srs~~~~~~Ga~t~~s~~~~~~~~l~~l~~~~~~l~~iP~~~La~ili~~~~~l~~~~~~ 267 (280)
T PF00916_consen 188 LGLANIVSGLFGGMPGSGSFSRSAVNYRAGARTRLSGLISALFVLLVLLFLAPLLAYIPKAVLAAILIVVGISLIDWSSL 267 (280)
T ss_pred hhhccccchhhcccccccccccchHHHhcCcceeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 99999999999999998 689999999999999999999999987 45678899999999999999999999975 345
Q ss_pred hccccccccch
Q 008018 497 VEIEWDDMRQA 507 (581)
Q Consensus 497 ~~I~~~~~~e~ 507 (581)
+++...++.|.
T Consensus 268 ~~~~~~~~~d~ 278 (280)
T PF00916_consen 268 RRLWRVSKADF 278 (280)
T ss_pred HHHhcCChhhe
Confidence 55433345553
No 14
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=99.83 E-value=1.8e-18 Score=185.35 Aligned_cols=358 Identities=17% Similarity=0.204 Sum_probs=238.5
Q ss_pred ccccccCCCchhHHHHHhHHHHHHHHHHHhhhhhhhhcc-CCCcccccccccCCCCCCCCCccCCCCCCccccCCCCcCC
Q 008018 31 RFKLKERNTTFTTELRAGTATFLTMAYILAVNASIIADS-GGTCTVSDCVALCSNPSVPLANCTTSDPAYRVVQPDESCK 109 (581)
Q Consensus 31 ~f~~~~r~~~~~~ei~aG~~tflam~yi~~vnp~il~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (581)
.|++++. .++...+..|+||.+.|.-.+++.|.+++++ +.. |
T Consensus 2 ~y~i~d~-P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g--------------------------------~---- 44 (510)
T KOG1292|consen 2 HYCINDN-PPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGG--------------------------------D---- 44 (510)
T ss_pred ccCCCCC-CCchHHHHhccchHHHHhhhhhhhhhhhcccccCC--------------------------------h----
Confidence 3667676 5888999999999999999999999999975 321 1
Q ss_pred CCCCCCCcchhhhhhh-hHHHHHHHHHHHHHHHHHHH-HhCCccccccCcccchhhhhhhhhc----cCC----CC----
Q 008018 110 FNPVNPGYQSCLEKLR-KDLIVATVASSLIGCVIMGA-FANLPLALAPGMGTNAYFAYTVVGF----HGS----GN---- 175 (581)
Q Consensus 110 ~~~~~~~~~~~~~~~~-~~li~At~l~agigtLl~gl-~a~lP~~l~pgmGl~a~~a~~vv~~----~G~----~~---- 175 (581)
+++ ..+++++++++|+.|++|.. ..|+|+.+||+ .||+.-..... ... .+
T Consensus 45 -------------~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S---fafl~p~~~i~~~~~~~~~~~~~~~~~~ 108 (510)
T KOG1292|consen 45 -------------EEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS---FAFLPPALAIISLPRFTCITTPHETDTE 108 (510)
T ss_pred -------------HHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc---eehhhHHHHHHhccccCCCCCcccchhH
Confidence 113 78999999999999999986 58999999998 55665332211 000 01
Q ss_pred ---chHHHHHHHHHHHHHHHHHHHhhhhHhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCc
Q 008018 176 ---VSYRSALTAVFMEGLIFLFISAIGFRSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACP 252 (581)
Q Consensus 176 ---~~~~~algav~laGii~lllg~~~l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p 252 (581)
-.++..-|+.++++.++.++|++++.+.+.|++.|....-..+-+|+-+.-.+.++. +.+
T Consensus 109 ~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l~~~~~~~~----------------~~~- 171 (510)
T KOG1292|consen 109 RFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGLFQDGFPKL----------------GKH- 171 (510)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhhHHhhhhhh----------------hhh-
Confidence 146778899999999999999999999999999999977776666655444333322 000
Q ss_pred cchhccccchhhccCCCcccCCCCCccCccccccCCCChhHHHHHHHHHHHHHHH--Hhhc------c----chhHHHHH
Q 008018 253 RSARAALAPVVTAANGTASLIPGGTVSGDILCLRDRMESPTFWLGVVGFVIIAYC--LVKN------I----KGAMIYGV 320 (581)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~llglvgl~iiivl--~~~~------v----~gaiLigI 320 (581)
+ ....|.. +-+++.... +.++ . +-+++++|
T Consensus 172 ----w------------------------------eI~l~~~----llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i 213 (510)
T KOG1292|consen 172 ----W------------------------------EISLPEI----LLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAI 213 (510)
T ss_pred ----e------------------------------eecHHHH----HHHHHHHHhhhcccccccccccchHhhccHHHHH
Confidence 0 0122211 111111111 1011 1 13678999
Q ss_pred HHHHHHHHHhcCccccC-CCCC--cCC-----cc-ccccccceeccccchhhc--ccccccchhhHHHHHHHHHHHHHHH
Q 008018 321 VFVTVVSWFRNTKVTAF-PDTD--AGN-----SA-HKYFKKVVDVHVIESTAG--ALSFKSMGKGYFWEAVVTFLYVDIL 389 (581)
Q Consensus 321 i~gtila~~~G~~v~~~-p~~~--vg~-----~~-~~~~~~~~~lP~~~~~~~--~fd~~~i~~~~~~~~i~~~~lV~~~ 389 (581)
.++.++++++-. .+. |.+. .+. .+ .-..++|+.+|-+.. ++ +||... ...++.-.++.++
T Consensus 214 ~ivW~~~~iLT~--tgay~~~~~~t~~~~RTD~~~vi~~apWi~vPyP~Q-wG~P~f~~~~------~f~m~aa~~va~i 284 (510)
T KOG1292|consen 214 AIVWLYCFILTI--TGAYPYKPTTTQSSCRTDRNGVISSAPWIRVPYPFQ-WGPPTFSAGL------VFAMMAASLVAMI 284 (510)
T ss_pred HHHHHHHHHHHh--ccccCCCccccCCcccccHhhhhccCCceeecCCCc-cCCCcccHHH------HHHHHHHHHHHHH
Confidence 998888887732 221 1100 000 00 001247999987643 22 344433 3456677788999
Q ss_pred HhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhhcCCC-ccccchhhhhhhhcccccchhH---HHHHHHHHH
Q 008018 390 DTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGALLGTS-PVTTFIESSTGIREGGRTGLTA---LTVAGYFFL 465 (581)
Q Consensus 390 etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivgglfG~~-PvTsf~eSaa~v~aGarTglsa---vv~g~~fll 465 (581)
|++|+..+.++.++. +.-..+.+||+...||++.+++|++|+- -.|+|+||++.+. .|++.| +-.++.|++
T Consensus 285 ES~G~y~a~ar~~~a--~ppP~~~inRgi~~eGig~lL~gl~G~gtG~Tt~~ENigll~---vTKVgSRrvvQ~aa~fmI 359 (510)
T KOG1292|consen 285 ESTGDYIACARLSSA--TPPPPSVLNRGIGWEGIGSLLAGLFGTGTGSTTSVENIGLLG---VTKVGSRRVVQIAAGFMI 359 (510)
T ss_pred HhcchHHHHHHHhcC--CCCChhhhhhhhhhhhHHHHHHHhhCCCccceeeccceeeEe---eeeeeeeeehhhhHHHHH
Confidence 999999999886431 2233467899999999999999999975 6678999987764 577654 444444443
Q ss_pred --HHH--HHHHHhhcChHHHHHHH-HHHHHHHH---HHhhccccccccchhhH
Q 008018 466 --ALF--FTPLLASIPAWAVGPPL-ILVGVLMM---RSVVEIEWDDMRQAIPA 510 (581)
Q Consensus 466 --~lf--l~Pli~~IP~aalagaL-IlvG~~m~---~~l~~I~~~~~~e~ipa 510 (581)
.++ |..+++.||.+.+|+.+ +++|++.. +.++.+|.+..++....
T Consensus 360 ~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf~dlns~RNl~Il 412 (510)
T KOG1292|consen 360 FFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQFVDLNSSRNLFIL 412 (510)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhheeeccccccchhhh
Confidence 333 78899999999999995 56666654 55566677666665443
No 15
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.82 E-value=2.9e-17 Score=175.75 Aligned_cols=320 Identities=15% Similarity=0.171 Sum_probs=204.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhCCccccccCcccchhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhHh
Q 008018 123 KLRKDLIVATVASSLIGCVIMGAFANLPLALAPGMGTNAYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISAIGFRS 202 (581)
Q Consensus 123 ~~~~~li~At~l~agigtLl~gl~a~lP~~l~pgmGl~a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~~~l~~ 202 (581)
++....+++..+.+|+.|+++.+..|+|+.++++.=--+... .. ..+++|.++.++.+++|++.+++|++|..+
T Consensus 54 aq~~swl~a~~~~~Gl~ti~lS~~~r~Pi~~awStPGaAll~----~~--~~~~~~~eavGAfiv~g~lilllGltG~f~ 127 (395)
T TIGR00843 54 AMIIGWITAIGIAAAVSGIFLSIRFKTPVLTAWSAPGAALLV----TG--FPGISLNEAIAAFITAAALIFLCGITGLFA 127 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeecCchHHHHHH----Hh--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347889999999999999999999999999987621122221 11 123789999999999999999999999999
Q ss_pred hhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhhccCCCcccCCCCCccCcc
Q 008018 203 KLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVTAANGTASLIPGGTVSGDI 282 (581)
Q Consensus 203 ~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (581)
|++|.||+++..++.+|+.+-...-.++..
T Consensus 128 rl~~~IP~~Va~amLAGIlL~f~l~~~~a~-------------------------------------------------- 157 (395)
T TIGR00843 128 KLLKIIPHGIAAAMLAGILFQFGLGAFAAL-------------------------------------------------- 157 (395)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence 999999999999999999765532211110
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHhhc-cc-hhHHHHHHHHHHHHHHhcCccccCCCCCcCCccccccccceeccccc
Q 008018 283 LCLRDRMESPTFWLGVVGFVIIAYCLVKN-IK-GAMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSAHKYFKKVVDVHVIE 360 (581)
Q Consensus 283 ~~~~~~~~~p~~llglvgl~iiivl~~~~-v~-gaiLigIi~gtila~~~G~~v~~~p~~~vg~~~~~~~~~~~~lP~~~ 360 (581)
.+.| +++ ..++..++..|| .| .++++++++|+++++.+|. .+.++. .. + +..|.+.
T Consensus 158 ------~~~p--ll~--~~mll~~l~~~r~~Pr~avl~aLlvG~iva~~~G~--~~~~~~--~~-------~-l~~p~~~ 215 (395)
T TIGR00843 158 ------DGLF--LIC--FSMLLCWLASKAFAPRYAMIAALICGIAFSFALGD--MNPTDL--DF-------K-IALPQFI 215 (395)
T ss_pred ------HHhH--HHH--HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcC--CCcccc--cc-------c-cccceee
Confidence 1122 122 112222333333 34 4689999999999999985 333221 10 0 1223332
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhhcCCCc-----
Q 008018 361 STAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGALLGTSP----- 435 (581)
Q Consensus 361 ~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivgglfG~~P----- 435 (581)
.++||+....+ ..+.++.+.+..- ++.+++.. ...|++++.++.+..+|++|+++++||+.+
T Consensus 216 --~P~fs~~a~~~-----l~lPl~~vtm~~q--nlpgiavl----~aaGy~~p~~~~~~~tGl~sll~ApfGg~~~nlaa 282 (395)
T TIGR00843 216 --APDFSFAHSLN-----LALPLFLVSLAGQ--FAPGIAAL----KAAGYNAPAKPIIAAAGLAALFAAFAGGISIGIAA 282 (395)
T ss_pred --CCCCCHHHHHH-----HHHHHHHHHHHhc--CchHHHHH----HHcCCCCCchHHHHHHHHHHHHHhccCCchhhhhH
Confidence 34566665432 2344444443222 43343332 124677788999999999999999999999
Q ss_pred -ccc-chhhhhhhhcccccchhHHHHHHHHHHHHHH----HHHHhhcChHHHHHH--HHHHHHHHHHHhhccccccccch
Q 008018 436 -VTT-FIESSTGIREGGRTGLTALTVAGYFFLALFF----TPLLASIPAWAVGPP--LILVGVLMMRSVVEIEWDDMRQA 507 (581)
Q Consensus 436 -vTs-f~eSaa~v~aGarTglsavv~g~~fll~lfl----~Pli~~IP~aalaga--LIlvG~~m~~~l~~I~~~~~~e~ 507 (581)
.++ |....++.+ .+|+..+++..|++.++.-++ ..+++.+|...+... |-+.|.++.+--.-. +|.++.
T Consensus 283 itaAic~G~~ah~d-~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~~~l~~a~--~~~~~r 359 (395)
T TIGR00843 283 ITAAICMGKDAHED-KDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIAGNIKIAL--HEDQER 359 (395)
T ss_pred HhHHHhcCcccccC-cCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHh--cCcchh
Confidence 332 444444444 788888999999998854444 448999998765544 556666654221222 334444
Q ss_pred hhHHHHHHHHH----HH--HHHHHHHHHHHHHHHH
Q 008018 508 IPAFLTLILMP----LT--YSIAYGLIGGICTYIV 536 (581)
Q Consensus 508 ipaf~tiv~~p----lt--~sI~~GI~~G~i~yvi 536 (581)
-++.+|++.+. +. -+-..|+..|.+.|.+
T Consensus 360 ~~a~~tflvtaSg~~~~gigaafWgl~~G~~~~~~ 394 (395)
T TIGR00843 360 DAALIAFLATASGLHFLGIGSAFWGLCAGGLAYFI 394 (395)
T ss_pred HHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHh
Confidence 45555555422 11 1345788888776653
No 16
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.50 E-value=3e-11 Score=128.14 Aligned_cols=317 Identities=18% Similarity=0.279 Sum_probs=196.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhCCccccc---cCcccchhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhh
Q 008018 123 KLRKDLIVATVASSLIGCVIMGAFANLPLALA---PGMGTNAYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISAIG 199 (581)
Q Consensus 123 ~~~~~li~At~l~agigtLl~gl~a~lP~~l~---pgmGl~a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~~~ 199 (581)
++...-+.+-.+..|+.|+...+..|.|+..+ || -++.. ... .+++|+++.++-+++|++.+++|+++
T Consensus 38 ~q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AWStPG---aAlL~----~~~--~~~~~~eavGAfl~~~~Li~l~G~tg 108 (378)
T PF03594_consen 38 AQIASWLFALYLGMGLTSILLSLRYRMPIVTAWSTPG---AALLA----TSL--PGYSFAEAVGAFLVAGALILLLGVTG 108 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcchHH---HHHHH----Hhc--cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667788888999999999999999999986 55 22222 111 23799999999999999999999999
Q ss_pred hHhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhhccCCCcccCCCCCcc
Q 008018 200 FRSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVTAANGTASLIPGGTVS 279 (581)
Q Consensus 200 l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (581)
..+|++|.||+++..++.+|+-+-. +++-. + .+
T Consensus 109 ~~~rl~~~IP~~ia~AMLAGvLl~f---~l~~f--------~-----a~------------------------------- 141 (378)
T PF03594_consen 109 LFGRLMRRIPPPIASAMLAGVLLPF---GLAAF--------T-----AL------------------------------- 141 (378)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHH---HHHHH--------H-----HH-------------------------------
Confidence 9999999999999999999985432 22211 0 00
Q ss_pred CccccccCCCChhHHHHHHHHHHHHHHHHhhc-c-chhHHHHHHHHHHHHHHhcCccccCCCCCcCCccccccccceecc
Q 008018 280 GDILCLRDRMESPTFWLGVVGFVIIAYCLVKN-I-KGAMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSAHKYFKKVVDVH 357 (581)
Q Consensus 280 ~~~~~~~~~~~~p~~llglvgl~iiivl~~~~-v-~gaiLigIi~gtila~~~G~~v~~~p~~~vg~~~~~~~~~~~~lP 357 (581)
-++|.. .+..+..++..|| . +.+++.+++.+.++++..|. .+.++. + ..+|
T Consensus 142 ---------~~~P~l----~~~ml~~~l~~~r~~pr~av~~al~~g~~~a~~~g~--~~~~~~-----------~-~~~~ 194 (378)
T PF03594_consen 142 ---------QADPLL----VGPMLAVFLLARRFSPRYAVLAALVAGVAVAALTGQ--LHPSAL-----------Q-LSLA 194 (378)
T ss_pred ---------HhHHHH----HHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHhcCC--CCcccc-----------c-cccc
Confidence 122322 1111222332232 2 34688889999998888875 332221 1 1233
Q ss_pred ccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhhcCCCccc
Q 008018 358 VIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGALLGTSPVT 437 (581)
Q Consensus 358 ~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivgglfG~~PvT 437 (581)
.+..+.++||++.+.+ ..+.++++.+.. -++.+++- +..+|-++..|+-+..-|+++++.++||+.+++
T Consensus 195 ~p~~~~P~Fs~~a~v~-----lalPL~ivtmas--QnlpG~aV----L~a~GY~~p~~~~~~~tGl~s~l~ApfGg~~~n 263 (378)
T PF03594_consen 195 HPVFTTPEFSWSALVS-----LALPLFIVTMAS--QNLPGIAV----LRAAGYQPPVNPLITVTGLASLLAAPFGGHAVN 263 (378)
T ss_pred eeEEECCcccHHHHHH-----HHHHHHHHHHHh--cchHHHHH----HHHcCCCCCchHHHHHHHHHHHHHhhhchhhhH
Confidence 3332356788887654 234444444322 12333332 223567888999999999999999999999887
Q ss_pred c-chhhh--hhhhcc---cccchhHHHHHHHHHHHHHH----HHHHhhcChHHHHHH--HHHHHHHHHHHhhcccccccc
Q 008018 438 T-FIESS--TGIREG---GRTGLTALTVAGYFFLALFF----TPLLASIPAWAVGPP--LILVGVLMMRSVVEIEWDDMR 505 (581)
Q Consensus 438 s-f~eSa--a~v~aG---arTglsavv~g~~fll~lfl----~Pli~~IP~aalaga--LIlvG~~m~~~l~~I~~~~~~ 505 (581)
- -+-++ .+-|++ .|--.+++..|++.++.-.| ..++...|.+.+... |-+.|.+..+ ++. .++|.+
T Consensus 264 lAaitaAIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~~s-l~~-A~~~~~ 341 (378)
T PF03594_consen 264 LAAITAAICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLGGS-LQT-AFSDEK 341 (378)
T ss_pred HHHHHHHHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HHH-HhcCcc
Confidence 3 33333 222344 23334678888888754444 348889998754433 4455555432 111 123433
Q ss_pred chhhHHHHHHHHH----HH--HHHHHHHHHHHHHHH
Q 008018 506 QAIPAFLTLILMP----LT--YSIAYGLIGGICTYI 535 (581)
Q Consensus 506 e~ipaf~tiv~~p----lt--~sI~~GI~~G~i~yv 535 (581)
+.-++++|++.+. +. -+-..|+..|.+++.
T Consensus 342 ~r~aAlvtFlvtaSGisl~gIgaafWgLv~G~~~~~ 377 (378)
T PF03594_consen 342 YREAALVTFLVTASGISLLGIGAAFWGLVAGLLVHL 377 (378)
T ss_pred hhHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHh
Confidence 3445666665422 10 134567777777654
No 17
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.12 E-value=6e-08 Score=101.75 Aligned_cols=320 Identities=19% Similarity=0.236 Sum_probs=193.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCCccccc---cCcccchhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhh
Q 008018 124 LRKDLIVATVASSLIGCVIMGAFANLPLALA---PGMGTNAYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISAIGF 200 (581)
Q Consensus 124 ~~~~li~At~l~agigtLl~gl~a~lP~~l~---pgmGl~a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~~~l 200 (581)
+...-+++-.+.-|+.|+.-.+.+|.|+..+ ||.- .++.+. .++++.++.++-+++|++.++.|++|.
T Consensus 54 q~aSwl~al~l~mGv~ti~Ls~~yR~Pv~~aWSTPG~a-------ll~asl--~g~s~~eaVGAfiVt~~li~l~G~~~~ 124 (402)
T COG3135 54 QIASWLTALGLAMGVSTLTLSLRYRVPVLTAWSTPGAA-------LLVASL--GGLSFAEAVGAFIVTGALIILCGLTGP 124 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccceeeeecCccHH-------HHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhhHH
Confidence 4667778888999999999999999999985 6621 122221 348999999999999999999999999
Q ss_pred HhhhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCCccchhccccchhhccCCCcccCCCCCccC
Q 008018 201 RSKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGACPRSARAALAPVVTAANGTASLIPGGTVSG 280 (581)
Q Consensus 201 ~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (581)
..|+++-||+++..++.+||=+ ..+++-. + .+
T Consensus 125 l~rl~~~IP~sla~AmlAGILL---~F~l~a~--------~-----a~-------------------------------- 156 (402)
T COG3135 125 LTRLMRIIPPSLAAAMLAGILL---RFGLKAF--------K-----AL-------------------------------- 156 (402)
T ss_pred HHHHHHhCChHHHHHHHHHHHH---HHHHHHH--------h-----cc--------------------------------
Confidence 9999999999999999998833 3344321 0 00
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHhcCccccCCCCCcCCccccccccceecccc
Q 008018 281 DILCLRDRMESPTFWLGVVGFVIIAYCLVKNIK-GAMIYGVVFVTVVSWFRNTKVTAFPDTDAGNSAHKYFKKVVDVHVI 359 (581)
Q Consensus 281 ~~~~~~~~~~~p~~llglvgl~iiivl~~~~v~-gaiLigIi~gtila~~~G~~v~~~p~~~vg~~~~~~~~~~~~lP~~ 359 (581)
-.+|...+ ..++..++.+...| .+++..+++|..++...|. ++.. . .......|.+
T Consensus 157 --------~~~p~l~l---pmv~~~ll~r~f~pr~aV~aalvvgv~va~~~G~----~~~~--~------~~~~~~~p~~ 213 (402)
T COG3135 157 --------PTQPLLVL---PMVLAYLLARVFAPRYAVIAALVVGVLVAALLGD----LHTA--L------VALEISTPTW 213 (402)
T ss_pred --------CCChHHHH---HHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhCc----cccc--c------cccccCccee
Confidence 01232211 11122222222233 4678888899999988874 2211 0 0111233443
Q ss_pred chhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhhhhHHHHHhhhcCCCccccc
Q 008018 360 ESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMSDAMSIVVGALLGTSPVTTF 439 (581)
Q Consensus 360 ~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~LiadGlanivgglfG~~PvTsf 439 (581)
- .++|++.++++ ..+.++++.+..- ++-+++ .++.+|-+++.+-.+.+-|+.+...+.||+..++--
T Consensus 214 v--~P~Fs~~A~l~-----lalPL~lvtmasQ--N~pGiA----vLka~gY~pp~~pl~~~TGl~sll~ApfG~~t~nLa 280 (402)
T COG3135 214 V--TPEFSFAAMLS-----LALPLFLVTMASQ--NLPGIA----VLKAAGYQPPPSPLIVATGLASLLSAPFGGHTVNLA 280 (402)
T ss_pred e--CCcccHHHHHH-----HhHHHHHHHHHhc--cCccce----eehhcCCCCCCchHHHHhHHHHHHhcccccceecHH
Confidence 2 44677876654 3444444444321 222222 234567778888889999999999999999988744
Q ss_pred hhhhhhhhcc------cccchhHHHHHHHHHHHHHHHH----HHhhcChHHHHHH--HHHHHHHHH---HHhhccccccc
Q 008018 440 IESSTGIREG------GRTGLTALTVAGYFFLALFFTP----LLASIPAWAVGPP--LILVGVLMM---RSVVEIEWDDM 504 (581)
Q Consensus 440 ~eSaa~v~aG------arTglsavv~g~~fll~lfl~P----li~~IP~aalaga--LIlvG~~m~---~~l~~I~~~~~ 504 (581)
.-|++-.... .|--.++++.|++.++.-.|.+ ++...|...+... |-+.|-++. ..+++- ++|
T Consensus 281 AItAAic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~lAGLALlg~~~~~l~~A~~~~--~~R 358 (402)
T COG3135 281 AITAAICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAALAGLALLGTLGNSLQAALKDE--RER 358 (402)
T ss_pred HHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHhcCc--ccc
Confidence 3344333222 3545578888888776544444 7888897643322 444454443 233322 223
Q ss_pred cchhhHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHH
Q 008018 505 RQAIPAFLTLIL-MPLT--YSIAYGLIGGICTYIVLH 538 (581)
Q Consensus 505 ~e~ipaf~tiv~-~plt--~sI~~GI~~G~i~yvil~ 538 (581)
.-++..|+...- ..+. -+-..|+..|.+.+.+.+
T Consensus 359 ~aAlvtF~VTaSG~tl~GIgaafWGLvaG~~~~~L~~ 395 (402)
T COG3135 359 EAALVTFLVTASGLTLFGIGAAFWGLVAGLLVLALLN 395 (402)
T ss_pred hhhhhheeehhccceeecccHHHHHHHHHHHHHHHHh
Confidence 333333332221 0000 134567777776665554
No 18
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.40 E-value=7.5e-05 Score=87.88 Aligned_cols=342 Identities=15% Similarity=0.127 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccccCcccchhhhh---hhhhccCCCCchH-HHHHHHHHHHHHHHHHHHhhhhHhhh
Q 008018 129 IVATVASSLIGCVIMGAFANLPLALAPGMGTNAYFAY---TVVGFHGSGNVSY-RSALTAVFMEGLIFLFISAIGFRSKL 204 (581)
Q Consensus 129 i~At~l~agigtLl~gl~a~lP~~l~pgmGl~a~~a~---~vv~~~G~~~~~~-~~algav~laGii~lllg~~~l~~~l 204 (581)
+.=+++++++++++.+++++.|+.+--..|-...|-+ .++...+ +.| +......+++.++.++++.+.. ..+
T Consensus 403 v~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~---~~yl~~~~WigiW~~~~~~lla~~~~-s~l 478 (900)
T TIGR00834 403 VSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESNG---LEYLVGRVWIGLWLVLLVLLLVATEG-SFL 478 (900)
T ss_pred HHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhcC---CchHHHHHHHHHHHHHHHHHHHHHhH-HHH
Confidence 3456788999999999999999998444565555543 3344444 332 3355578899999999999876 468
Q ss_pred hhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccc-hhhccCCccchhccccchhhccCCCcccCC------CCC
Q 008018 205 AKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSST-LVTLGACPRSARAALAPVVTAANGTASLIP------GGT 277 (581)
Q Consensus 205 ~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t-~~~lg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~ 277 (581)
+|++.+----.|.+-|+++-+.-+++.. +.+--..+.. .+....+-. | .+.|......+ -+.
T Consensus 479 vryiTRFTeEiFa~lIs~IFI~eai~~L--~~~f~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~ 547 (900)
T TIGR00834 479 VRYISRFTQEIFSFLISLIFIYETFSKL--IKIFQEHPLQVFYNTLFCVP-------P--KPQGPSVSALLEKDCSKLGG 547 (900)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHH--HHHHhcCCcccccccccccc-------c--cccccccccccccccccccc
Confidence 8999888888888888877776666543 1111011000 000000000 0 00000000000 000
Q ss_pred ccCcccccc-CCCChhHHHHHHHHHHHHHHHHh-hc-------cc-----hhHHHHHHHHHHHHHHhcCccccCCCCCcC
Q 008018 278 VSGDILCLR-DRMESPTFWLGVVGFVIIAYCLV-KN-------IK-----GAMIYGVVFVTVVSWFRNTKVTAFPDTDAG 343 (581)
Q Consensus 278 ~~~~~~~~~-~~~~~p~~llglvgl~iiivl~~-~~-------v~-----gaiLigIi~gtila~~~G~~v~~~p~~~vg 343 (581)
..+...|.. ++..-..+++++.++.+...+.. |+ ++ -++.++|++-+.+.+.++- ++.+.-.+.
T Consensus 548 ~~~~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~--v~~~kl~Vp 625 (900)
T TIGR00834 548 TLGGNNCRFQPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGD--TYTQKLSVP 625 (900)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhcc--CcccccCCC
Confidence 000001100 01111123344444444433321 11 11 2568899999988887762 222211010
Q ss_pred C-cccccc--ccceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCCCCccCcChhhhh
Q 008018 344 N-SAHKYF--KKVVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQNGDFEGQYFAFMS 420 (581)
Q Consensus 344 ~-~~~~~~--~~~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~g~~~~~~~~Lia 420 (581)
. -.++.+ .+|+ ++.+.. ...+.+..+. .++.++++ +.+.-++|+--|..=+.++...+ .+....+-.++.
T Consensus 626 ~~f~pt~p~~R~W~-i~p~~~-~~~~p~w~~~-~A~iPAll-l~ILiFmD~nIts~iv~~~e~kL---kKgsgyH~Dlll 698 (900)
T TIGR00834 626 SGLKVTNPSARGWF-IPPLGE-NRPFPWWMMF-AAALPALL-VFILIFMEQQITTLIVSKKERKL---KKGSGFHLDLLL 698 (900)
T ss_pred CCcCCCCCCCCCeE-Eccccc-cccccHHHHH-HHHHHHHH-HHHHHHHHhhhHHHHhcCccccC---CCCcccchHHHH
Confidence 0 001111 2444 221110 0001111100 12223322 33344778743333222211111 222356788999
Q ss_pred hhHHHHHhhhcCCCccc-cchhhhhhhhc----------cc--------ccchhHHHHHHHHHHHHHHHHHHhhcChHHH
Q 008018 421 DAMSIVVGALLGTSPVT-TFIESSTGIRE----------GG--------RTGLTALTVAGYFFLALFFTPLLASIPAWAV 481 (581)
Q Consensus 421 dGlanivgglfG~~PvT-sf~eSaa~v~a----------Ga--------rTglsavv~g~~fll~lfl~Pli~~IP~aal 481 (581)
-|+-|.++|++|-++.+ +.+||..++++ |- -+|+|+++.++++.+++++.|++..||.+|+
T Consensus 699 lg~~~~v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLiglsv~~~PvL~~IP~aVL 778 (900)
T TIGR00834 699 VVGMGGVAALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLVGLSILMEPILKRIPLAVL 778 (900)
T ss_pred HHHHHHHHHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 99999999999998776 44566654432 11 1678999999888788999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 008018 482 GPPLILVGVLMMR 494 (581)
Q Consensus 482 agaLIlvG~~m~~ 494 (581)
.|+..+.|+.-+.
T Consensus 779 ~GvFlYMGv~SL~ 791 (900)
T TIGR00834 779 FGIFLYMGVTSLS 791 (900)
T ss_pred HHHHHHHHHhhcc
Confidence 9999998887653
No 19
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=97.94 E-value=0.0043 Score=72.26 Aligned_cols=331 Identities=14% Similarity=0.160 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccCcccchhhh---hhhhhccCCCCchH-HHHHHHHHHHHHHHHHHHhhhhHh
Q 008018 127 DLIVATVASSLIGCVIMGAFANLPLALAPGMGTNAYFA---YTVVGFHGSGNVSY-RSALTAVFMEGLIFLFISAIGFRS 202 (581)
Q Consensus 127 ~li~At~l~agigtLl~gl~a~lP~~l~pgmGl~a~~a---~~vv~~~G~~~~~~-~~algav~laGii~lllg~~~l~~ 202 (581)
.-+.=+++++.+++++.+++++-|+.+-...|-...|= |.++...+ ..| +.-...+++..++.++++.+.. .
T Consensus 392 ~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~---~dyl~~r~wVglW~~~l~illaa~~a-s 467 (876)
T KOG1172|consen 392 IGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKDNG---LDYLAFRAWVGLWTAFLLILLAATNA-S 467 (876)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhhCC---CchhhHHHHHHHHHHHHHHHHHHhhh-h
Confidence 34566889999999999999999998843345443332 33344444 332 3356688999999999999986 4
Q ss_pred hhhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCccchhhccCC--ccchhccccchhhccCCCcccCCCCCccC
Q 008018 203 KLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSSTLVTLGAC--PRSARAALAPVVTAANGTASLIPGGTVSG 280 (581)
Q Consensus 203 ~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~t~~~lg~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (581)
.+++++.+.---.|.+-|.++.+.-+++.. +++....+ ...... |...+ -...+ .+.+.
T Consensus 468 ~lv~~~TRfteEiF~~LIs~iFi~eai~kl--~~i~~~~~---~~~~~~~~~~~~~--------~~~~~------~~~~~ 528 (876)
T KOG1172|consen 468 SLVKYITRFTEEIFGLLISLIFIYEAIKKL--IKIFKGLP---IEFDSKPNPGADW--------SGPEC------ESVSG 528 (876)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHH--HHHhhcCc---ccccccCCccccc--------ccccc------cccCc
Confidence 789999888888888888877776666632 11111110 000000 00000 00000 01100
Q ss_pred cccccc--CCCChhHHHHHHHHHHHHHHHH-hhccc------------hhHHHHHHHHHHHHHHhcC-ccccCCCCCcCC
Q 008018 281 DILCLR--DRMESPTFWLGVVGFVIIAYCL-VKNIK------------GAMIYGVVFVTVVSWFRNT-KVTAFPDTDAGN 344 (581)
Q Consensus 281 ~~~~~~--~~~~~p~~llglvgl~iiivl~-~~~v~------------gaiLigIi~gtila~~~G~-~v~~~p~~~vg~ 344 (581)
...+.. ++..-..+++.+.++.+...+. .|+.+ -++.++|++-+.+.++.+. ....++.. ...
T Consensus 529 ~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~~~~kl~vp-~~~ 607 (876)
T KOG1172|consen 529 TLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVFSLIDYFGGSVETPKLPVP-SVF 607 (876)
T ss_pred ccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHHHHHHhhccccCCCccccC-cCC
Confidence 000000 0111112222222222222221 11111 2567888888888887762 11111100 000
Q ss_pred cccc-cc-ccceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhccccCCC-CCccCcChhhhhh
Q 008018 345 SAHK-YF-KKVVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDQN-GDFEGQYFAFMSD 421 (581)
Q Consensus 345 ~~~~-~~-~~~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag~~d~~-g~~~~~~~~Liad 421 (581)
+++ .+ .+|+-.|. ++..+..+. .+++++++ +.+.-++|+--+..-+-++ +.+ .+....+-.++--
T Consensus 608 -~~t~~~~rgw~v~~~-----~~~P~~~~~-~A~ipall-l~iLiFmDqqIts~iv~rk----e~kLKKgsgyH~DLlll 675 (876)
T KOG1172|consen 608 -PPTWPFDRGWFVPPF-----GKNPWWYVF-AALIPALL-LTILIFMDQQITAVIVNRK----ENKLKKGSGYHLDLLLL 675 (876)
T ss_pred -CCCCcccCCeeeCCC-----CCCCHHHHH-HHHHHHHH-HHHHHHhcchHHHHHhhcc----cccCCCCcchhHHHHHH
Confidence 000 01 24433331 112222211 12223222 3334477874443322111 111 1223567789999
Q ss_pred hHHHHHhhhcCCCccc-cchhhhhhhhccc------------------ccchhHHHHHHHHHHHHHHHHHHhhcChHHHH
Q 008018 422 AMSIVVGALLGTSPVT-TFIESSTGIREGG------------------RTGLTALTVAGYFFLALFFTPLLASIPAWAVG 482 (581)
Q Consensus 422 GlanivgglfG~~PvT-sf~eSaa~v~aGa------------------rTglsavv~g~~fll~lfl~Pli~~IP~aala 482 (581)
|+-|.++|+||=++.. +..||...+++=+ -.|+++++.+++..++.++.|++..||++++-
T Consensus 676 gil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvgls~~~~pvL~~IP~~VL~ 755 (876)
T KOG1172|consen 676 GILTLICSLLGLPWSNAATVQSPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVGLSVLLLPVLKLIPMPVLY 755 (876)
T ss_pred HHHHHHHHhcCCCccccccccCHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 9999999999999776 5678887665421 15778888888888888899999999999999
Q ss_pred HHHHHHHHHHH
Q 008018 483 PPLILVGVLMM 493 (581)
Q Consensus 483 gaLIlvG~~m~ 493 (581)
|...+.|+--+
T Consensus 756 GvFlYMgv~SL 766 (876)
T KOG1172|consen 756 GVFLYMGVSSL 766 (876)
T ss_pred HHHHHHhhccC
Confidence 99777776544
No 20
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=96.76 E-value=0.00067 Score=75.95 Aligned_cols=346 Identities=16% Similarity=0.178 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCcccchhhh---hhhhhccCCCCchHHH-HHHHHHHHHHHHHHHHhhhhHhh
Q 008018 128 LIVATVASSLIGCVIMGAFANLPLALAPGMGTNAYFA---YTVVGFHGSGNVSYRS-ALTAVFMEGLIFLFISAIGFRSK 203 (581)
Q Consensus 128 li~At~l~agigtLl~gl~a~lP~~l~pgmGl~a~~a---~~vv~~~G~~~~~~~~-algav~laGii~lllg~~~l~~~ 203 (581)
-.+=+++++++++++.+++++.|+.+--..|-...|- |..+...+ ++|-. -....++.+++.++++.+.. ..
T Consensus 66 gv~e~l~~~~i~Gi~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~~~---~~fl~~~~wig~w~~~~~~~~~~~~~-s~ 141 (510)
T PF00955_consen 66 GVMEVLLSTAICGIIFSLFSGQPLTILGSTGPVLVFEKILYKFCKSYG---LDFLPFRAWIGIWTAIFLLVLAAFNA-SF 141 (510)
T ss_dssp -HHHHHHHHHHHHHHHHHCC------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccc-cc
Confidence 4466788999999999999999987633344433332 22333333 33322 34577888888888888876 46
Q ss_pred hhhccChhhhhhhhhhHHHHHHHHhhcccccccccccCcc--chhhccC----Cccchhcc-------c----cchh-hc
Q 008018 204 LAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYSSS--TLVTLGA----CPRSARAA-------L----APVV-TA 265 (581)
Q Consensus 204 l~~~iP~~V~~gi~aGIGL~Ia~iGL~~~~G~Giiv~~~~--t~~~lg~----~p~~~~~~-------~----~~~~-~~ 265 (581)
++|++-+-.-..+..-|.++.+.-+++.. ..+-...+- ....... .|+...+. + -.+. ..
T Consensus 142 lv~~~TRfTeEiF~~lIs~iFi~ea~~~l--~~~~~~~p~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (510)
T PF00955_consen 142 LVRYITRFTEEIFALLISIIFIYEAIKKL--VKIFKKYPLNSDYVTQYSCQCTPPENSNNSTLNPWTNLNNGSINWSNLS 219 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 78888888777777888877776666654 122111110 0000000 00000000 0 0000 00
Q ss_pred cCCCcccCCCCCccCccccc-----cCCCChhHHHHHHHHHHHHHHHHh-hc-------cc-----hhHHHHHHHHHHHH
Q 008018 266 ANGTASLIPGGTVSGDILCL-----RDRMESPTFWLGVVGFVIIAYCLV-KN-------IK-----GAMIYGVVFVTVVS 327 (581)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~llglvgl~iiivl~~-~~-------v~-----gaiLigIi~gtila 327 (581)
.+.|..+. ++... -.|. .++..-...++.+.++.+...+.. |+ ++ -++.++|++-+.+.
T Consensus 220 ~~~c~~~~--g~~~g-~~c~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~~vR~~isDf~v~iaI~~~~~~~ 296 (510)
T PF00955_consen 220 NSECENIN--GELVG-TSCDDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPRWVREIISDFGVPIAILIMTLVD 296 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccc--ccccc-cccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccHHHHHhHHhhHHHHHHHHHHHHH
Confidence 00010000 00000 0010 001111122233333333333321 11 11 25678888888887
Q ss_pred HHhcCccc--cCCCCCcCCcccccc--ccceeccccchhhcccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHhhhcc
Q 008018 328 WFRNTKVT--AFPDTDAGNSAHKYF--KKVVDVHVIESTAGALSFKSMGKGYFWEAVVTFLYVDILDTTGTLYSMARFAG 403 (581)
Q Consensus 328 ~~~G~~v~--~~p~~~vg~~~~~~~--~~~~~lP~~~~~~~~fd~~~i~~~~~~~~i~~~~lV~~~etiGtl~ava~~ag 403 (581)
+..+.++. ++|+.. .++.. .+|+--| + ...++.... .++.+++ .+.+.-++|.--+..=+.++..
T Consensus 297 ~~~~~~~~kL~vp~~f----~pt~~~~r~W~v~p-~----~~~p~w~~~-aA~~pal-ll~iL~F~DqnIts~ivn~~e~ 365 (510)
T PF00955_consen 297 YLFGVDTPKLNVPSSF----KPTSPGKRGWFVNP-F----GSLPWWAIF-AAIIPAL-LLTILFFMDQNITSLIVNRPEN 365 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcccccccCCCCCC----CCCCCCCCCeecCc-c----cCCCHHHHH-HHHHHHH-HHHHHHHHHHhHhHHHhCChhh
Confidence 76663211 122210 00000 1232111 1 111111110 0112221 1222336665222211111111
Q ss_pred ccCCCCCccCcChhhhhhhHHHHHhhhcCCCccc-cchhhhhhhhccc----------c--------cchhHHHHHHHHH
Q 008018 404 FTDQNGDFEGQYFAFMSDAMSIVVGALLGTSPVT-TFIESSTGIREGG----------R--------TGLTALTVAGYFF 464 (581)
Q Consensus 404 ~~d~~g~~~~~~~~LiadGlanivgglfG~~PvT-sf~eSaa~v~aGa----------r--------Tglsavv~g~~fl 464 (581)
+-.+....+-.+...|+-|.+.+++|-++.+ +..||..++++=. + +|++.++..+++.
T Consensus 366 ---kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe~~~i~~V~EqRvT~l~~~~Lig 442 (510)
T PF00955_consen 366 ---KLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAPGEKPKIVGVREQRVTGLLVHLLIG 442 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---ccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccCCCCCeeCeEEEecccHHHHHHHHH
Confidence 1122235567789999999999999988666 4667775544321 1 5667788888777
Q ss_pred HHHHHHHHHhhcChHHHHHHHHHHHHHHHHHh
Q 008018 465 LALFFTPLLASIPAWAVGPPLILVGVLMMRSV 496 (581)
Q Consensus 465 l~lfl~Pli~~IP~aalagaLIlvG~~m~~~l 496 (581)
+++++.|++..||.+++.|+..+.|+.-+.+.
T Consensus 443 ls~~l~pvL~~IP~~VL~GvFlymG~~sL~gn 474 (510)
T PF00955_consen 443 LSLFLLPVLKLIPMPVLYGVFLYMGVTSLSGN 474 (510)
T ss_dssp --------------------------------
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhheeeeecCc
Confidence 88899999999999999999999898777554
No 21
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=91.34 E-value=24 Score=38.62 Aligned_cols=49 Identities=20% Similarity=0.112 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHhhhhhccChhhhhhhhhhHHHHHHHHhhc
Q 008018 182 LTAVFMEGLIFLFISAIGFRSKLAKLVPKPVRISSSAGIGLFLAFIGLQ 230 (581)
Q Consensus 182 lgav~laGii~lllg~~~l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~ 230 (581)
++..++.|++-++++.+|-+.++++.-.+-|+.|...-.|..=...|++
T Consensus 145 Lalgilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~ 193 (492)
T PF11840_consen 145 LALGILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIK 193 (492)
T ss_pred HHHHHHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHH
Confidence 4556788999999999999999999999999988776666544444444
No 22
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=68.57 E-value=19 Score=40.38 Aligned_cols=67 Identities=19% Similarity=0.381 Sum_probs=42.8
Q ss_pred HHHhhcChHHHHHHHHHHHHHHHH-Hhhc----------cccccccchhhHHHHHHHHHH----------HHHHHHHHHH
Q 008018 471 PLLASIPAWAVGPPLILVGVLMMR-SVVE----------IEWDDMRQAIPAFLTLILMPL----------TYSIAYGLIG 529 (581)
Q Consensus 471 Pli~~IP~aalagaLIlvG~~m~~-~l~~----------I~~~~~~e~ipaf~tiv~~pl----------t~sI~~GI~~ 529 (581)
=+...+|..++|+++.++|..+++ .++. -+|.+..+...++.|++.+.+ .++|..|+..
T Consensus 129 ~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~g~~~~i~ILiGlv~ 208 (451)
T COG2233 129 RLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDFGSLENLGLALVTLLIILLINRFGKGFLRRIPILIGLVV 208 (451)
T ss_pred HHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCCCCcccCchhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 466689999999998888887763 2221 234455555556555544332 1568888888
Q ss_pred HHHHHHHH
Q 008018 530 GICTYIVL 537 (581)
Q Consensus 530 G~i~yvil 537 (581)
|-+.+..+
T Consensus 209 G~~la~~~ 216 (451)
T COG2233 209 GYLLALFM 216 (451)
T ss_pred HHHHHHHh
Confidence 87766655
No 23
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=58.73 E-value=90 Score=34.40 Aligned_cols=124 Identities=18% Similarity=0.329 Sum_probs=62.8
Q ss_pred cChhhhhhhHHHHHhhhcCCCc----c---cc--chhhhhhhhc--ccccchhH-HHHHHHHHH-HHHHHH-----HHhh
Q 008018 414 QYFAFMSDAMSIVVGALLGTSP----V---TT--FIESSTGIRE--GGRTGLTA-LTVAGYFFL-ALFFTP-----LLAS 475 (581)
Q Consensus 414 ~~~~LiadGlanivgglfG~~P----v---Ts--f~eSaa~v~a--GarTglsa-vv~g~~fll-~lfl~P-----li~~ 475 (581)
....+++-|++|++=++....| . ++ |.--...+.. |-.+-+.+ ++.|+++.+ ...+.. +...
T Consensus 43 i~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~ 122 (415)
T TIGR00801 43 VSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKL 122 (415)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 4556778888888877665544 1 01 1110000111 11111222 344444442 233233 3788
Q ss_pred cChHHHHHHHHHHHHHHH-HHhhcc----------ccccccchhhHHHHHHHHHHH----------HHHHHHHHHHHHHH
Q 008018 476 IPAWAVGPPLILVGVLMM-RSVVEI----------EWDDMRQAIPAFLTLILMPLT----------YSIAYGLIGGICTY 534 (581)
Q Consensus 476 IP~aalagaLIlvG~~m~-~~l~~I----------~~~~~~e~ipaf~tiv~~plt----------~sI~~GI~~G~i~y 534 (581)
+|..+.++++..+|+.+. ..++.. +|.+..+....+++++.+.+. +++..|+..|.+.+
T Consensus 123 ~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~~~~~~~~~~~vg~~~l~~~vl~~~~~~g~~~~~aiLigiv~g~i~a 202 (415)
T TIGR00801 123 FPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSSATYGSLENLGVAFVVLALIILLNRFGKGFLKSISILIGILVGYILA 202 (415)
T ss_pred CCchhHHHhHHHHHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999999888888775 233322 222333344444444433221 36666777776666
Q ss_pred HHH
Q 008018 535 IVL 537 (581)
Q Consensus 535 vil 537 (581)
..+
T Consensus 203 ~~l 205 (415)
T TIGR00801 203 LFM 205 (415)
T ss_pred HHc
Confidence 544
No 24
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=54.70 E-value=86 Score=34.69 Aligned_cols=84 Identities=14% Similarity=0.227 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccccCcccchhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHhh-hhHhhhhhcc
Q 008018 130 VATVASSLIGCVIMGAFANLPLALAPGMGTNAYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISAI-GFRSKLAKLV 208 (581)
Q Consensus 130 ~At~l~agigtLl~gl~a~lP~~l~pgmGl~a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~~-~l~~~l~~~i 208 (581)
...+.++|+++++.+.+.+.++-++. .+-+++.++. ...+-..=.++.+..|++++++|++ +..-.+...+
T Consensus 257 ~~~~~~tGl~sll~ApfGg~~~nlaa-------itaAic~G~~-ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~ 328 (395)
T TIGR00843 257 KPIIAAAGLAALFAAFAGGISIGIAA-------ITAAICMGKD-AHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAAL 328 (395)
T ss_pred hHHHHHHHHHHHHHhccCCchhhhhH-------HhHHHhcCcc-cccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 55567889999999888888766532 0122333221 1111222346688999999999998 6556788999
Q ss_pred ChhhhhhhhhhHHH
Q 008018 209 PKPVRISSSAGIGL 222 (581)
Q Consensus 209 P~~V~~gi~aGIGL 222 (581)
|+.++. ..+|+.+
T Consensus 329 P~~li~-~laGlAl 341 (395)
T TIGR00843 329 PKELIA-ALAGLAL 341 (395)
T ss_pred CHHHHH-HHHHHHH
Confidence 999964 3455554
No 25
>PRK10720 uracil transporter; Provisional
Probab=52.76 E-value=38 Score=37.54 Aligned_cols=47 Identities=17% Similarity=0.177 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhhhhHhhhhhccChhhhhhhhhhHHHHHHHHhhcc
Q 008018 185 VFMEGLIFLFISAIGFRSKLAKLVPKPVRISSSAGIGLFLAFIGLQN 231 (581)
Q Consensus 185 v~laGii~lllg~~~l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~~ 231 (581)
..++|++.+++++++-...+...+|++|..|.....=-.+...|++.
T Consensus 305 ~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~Gi~~ 351 (428)
T PRK10720 305 IGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGASGIRV 351 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34588888888887444578999999999888775555566666654
No 26
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=48.09 E-value=1.5e+02 Score=32.40 Aligned_cols=37 Identities=27% Similarity=0.547 Sum_probs=24.5
Q ss_pred HHHHHHHHH-HHHHHHHHhhcChHHHHHHHHHHHHHHH
Q 008018 457 LTVAGYFFL-ALFFTPLLASIPAWAVGPPLILVGVLMM 493 (581)
Q Consensus 457 vv~g~~fll-~lfl~Pli~~IP~aalagaLIlvG~~m~ 493 (581)
++.|+++++ ...+--+.+.+|..++|..+.++|....
T Consensus 90 ~v~Gii~illg~~~~~l~~~iPp~v~G~~i~~IGl~l~ 127 (406)
T TIGR03173 90 IVAGLFVILLAPFFSKLVRFFPPVVTGTVITLIGLSLM 127 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHH
Confidence 445555443 3233448889998888887778887665
No 27
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=47.40 E-value=51 Score=36.78 Aligned_cols=89 Identities=15% Similarity=0.108 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccccCcccchhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhHhhhhhccC
Q 008018 130 VATVASSLIGCVIMGAFANLPLALAPGMGTNAYFAYTVVGFHGSGNVSYRSALTAVFMEGLIFLFISAIGFRSKLAKLVP 209 (581)
Q Consensus 130 ~At~l~agigtLl~gl~a~lP~~l~pgmGl~a~~a~~vv~~~G~~~~~~~~algav~laGii~lllg~~~l~~~l~~~iP 209 (581)
.-++.+-|++|++.|++...|..- .+-| ..++...| ..+ =-....+|++.+++|+++-...+...+|
T Consensus 278 ~rgi~~dGi~s~laglfg~~p~tt---~sqN----vGvi~~Tg--V~S----R~v~~~aa~ilillgl~PK~~alia~IP 344 (433)
T PRK11412 278 RRSFVATGFMTLITVPLAVIPFSP---FVSS----IGLLTQTG--DYR----RRSFIYGSVMCLLVALIPALTRLFCSIP 344 (433)
T ss_pred ccchhhccHHHHHHHhcCCCCCCc---hhhh----hhhhhhcC--Cch----hHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 335677777777777776666421 1111 11222222 011 1245678888999999855567899999
Q ss_pred hhhhhhhhhhHHHHHHHHhhcc
Q 008018 210 KPVRISSSAGIGLFLAFIGLQN 231 (581)
Q Consensus 210 ~~V~~gi~aGIGL~Ia~iGL~~ 231 (581)
.+|..|...-.=-.++..|++.
T Consensus 345 ~pVlGg~~~~~Fg~I~~~Gi~~ 366 (433)
T PRK11412 345 LPVSSAVMLVSYLPLLGSALVF 366 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887766555566666654
No 28
>PF06157 DUF973: Protein of unknown function (DUF973); InterPro: IPR009321 This family consists of several hypothetical archaeal proteins of unknown function.
Probab=39.33 E-value=2e+02 Score=30.37 Aligned_cols=49 Identities=16% Similarity=0.333 Sum_probs=25.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHH------HhhcChHHHHHHHHHHHHHHH-HHhhcc
Q 008018 451 RTGLTALTVAGYFFLALFFTPL------LASIPAWAVGPPLILVGVLMM-RSVVEI 499 (581)
Q Consensus 451 rTglsavv~g~~fll~lfl~Pl------i~~IP~aalagaLIlvG~~m~-~~l~~I 499 (581)
+||..=+..|.++.+.-+..++ +...+....+.++.++|.++. .++.++
T Consensus 84 ~tG~~Lilig~il~iig~i~~i~~~~~~~~~~~l~~ig~il~~IG~ILlgi~~yrl 139 (285)
T PF06157_consen 84 KTGATLILIGYILIIIGAILAIISLFSILAGLILLLIGAILAFIGYILLGIGLYRL 139 (285)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5565545555544432222222 333444455566778888876 455565
No 29
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=37.32 E-value=2.5e+02 Score=30.50 Aligned_cols=69 Identities=25% Similarity=0.384 Sum_probs=41.1
Q ss_pred HHHhhcChHHHHHHHHHHHHHHH-HHhhcc--ccc--------cccchhhHHHHHHHHHH----------HHHHHHHHHH
Q 008018 471 PLLASIPAWAVGPPLILVGVLMM-RSVVEI--EWD--------DMRQAIPAFLTLILMPL----------TYSIAYGLIG 529 (581)
Q Consensus 471 Pli~~IP~aalagaLIlvG~~m~-~~l~~I--~~~--------~~~e~ipaf~tiv~~pl----------t~sI~~GI~~ 529 (581)
-+...+|..+.+++++.+|..+. ..++.. .|. +..+..+.+.+++.+.+ .+++..|+..
T Consensus 114 ~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ailigi~~ 193 (389)
T PF00860_consen 114 RLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDGLLVGDGKNLGLAVLTLLFILLLSLFLKGFLRKGAILIGIIA 193 (389)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT-B---HHHHHHHHHHHHHHHHHHHSSSTTTTTHHHHHHHHH
T ss_pred HHHHHhChhheEeeEeeehhhhhhhHhhccccccccccccccccccccccccccchhhhhhhhhhhhhcccccchhhhhh
Confidence 47889999999999999998876 344433 221 11222334433332221 2678889999
Q ss_pred HHHHHHHHHH
Q 008018 530 GICTYIVLHI 539 (581)
Q Consensus 530 G~i~yvil~l 539 (581)
|.+.|.++..
T Consensus 194 g~i~~~~~g~ 203 (389)
T PF00860_consen 194 GWIVAAILGV 203 (389)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhhhcccc
Confidence 9888877753
No 30
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=32.82 E-value=1e+02 Score=34.24 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhhhhHhhhhhccChhhhhhhhhhHHHHHHHHhhc
Q 008018 184 AVFMEGLIFLFISAIGFRSKLAKLVPKPVRISSSAGIGLFLAFIGLQ 230 (581)
Q Consensus 184 av~laGii~lllg~~~l~~~l~~~iP~~V~~gi~aGIGL~Ia~iGL~ 230 (581)
....++++.+++++++-...+...+|++|..|.....=-.|+..|++
T Consensus 324 v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~ 370 (429)
T TIGR03616 324 VFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGAR 370 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888998854457899999999988877555556666665
No 31
>PRK11660 putative transporter; Provisional
Probab=30.37 E-value=1.8e+02 Score=33.40 Aligned_cols=125 Identities=12% Similarity=0.093 Sum_probs=75.6
Q ss_pred CcChhhhhhhHHHHHhhhcCCCccc-cchhhhhhhhcccccch-hHHHHHHH--HHH-HHHHHHHHhhcChHHHHHHHHH
Q 008018 413 GQYFAFMSDAMSIVVGALLGTSPVT-TFIESSTGIREGGRTGL-TALTVAGY--FFL-ALFFTPLLASIPAWAVGPPLIL 487 (581)
Q Consensus 413 ~~~~~LiadGlanivgglfG~~PvT-sf~eSaa~v~aGarTgl-savv~g~~--fll-~lfl~Pli~~IP~aalagaLIl 487 (581)
++.-.=+++=++.+.|++-++.-.+ +-....+|.+. .-+++ ++++..+. ++. .+-..|....=+.-...+.-+
T Consensus 316 EL~a~G~aNi~~~~fgg~p~~~s~srSa~n~~aGarT-~la~iv~a~~~ll~ll~l~~ll~~iP~~vLa~ili~~~~~m- 393 (568)
T PRK11660 316 ELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATS-PISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWNM- 393 (568)
T ss_pred HHHHHhHHHHHHHHhCcccccchHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh-
Confidence 3444446788899999988876543 33332333332 24454 34444333 332 334556444433333344422
Q ss_pred HHH-HHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 488 VGV-LMMRSVVEIEWDDMRQAIPAFLTLILMPLTYSIAYGLIGGICTYIVLHI 539 (581)
Q Consensus 488 vG~-~m~~~l~~I~~~~~~e~ipaf~tiv~~plt~sI~~GI~~G~i~yvil~l 539 (581)
+-. ....-.++.+++|....+..+++.++..+..++..|+.+.++.++....
T Consensus 394 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~Gi~~s~~~~~~~~~ 446 (568)
T PRK11660 394 SEAHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIA 446 (568)
T ss_pred hhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 222 2334456678888888998888888889999999999999998775443
No 32
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=28.91 E-value=4.1e+02 Score=30.51 Aligned_cols=129 Identities=15% Similarity=0.182 Sum_probs=78.4
Q ss_pred cCCCCCccCcChhhhhhhHHHHHhhhcCCCcc--ccchhhhhhhhcccccch-hHHHHHHHHH-H--HHHHHH--HHhhc
Q 008018 405 TDQNGDFEGQYFAFMSDAMSIVVGALLGTSPV--TTFIESSTGIREGGRTGL-TALTVAGYFF-L--ALFFTP--LLASI 476 (581)
Q Consensus 405 ~d~~g~~~~~~~~LiadGlanivgglfG~~Pv--Tsf~eSaa~v~aGarTgl-savv~g~~fl-l--~lfl~P--li~~I 476 (581)
.|.|+| +.-.=+++-++..+|++=++... |.....+ |.+. ..+++ ++++..+.++ + .+-..| .++.+
T Consensus 291 ~d~n~E---l~a~G~~N~~~~~fg~~p~~~s~srs~~~~~~-G~~t-~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~i 365 (563)
T TIGR00815 291 IDANQE---LVAQGIANIVGSFFSCYPATGSLSRTAVNAKA-GCRT-QLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAI 365 (563)
T ss_pred CCCcHH---HHHhhHHHHHHHHhCccCCCCcchHHHHHHhc-CCcc-hHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 455544 33334678888999988776433 3333222 2222 23444 4444433333 2 233445 34444
Q ss_pred ChHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 477 PAWAVGPPLILVGVLMMRSVVEIEWDDMRQAIPAFLTLILMPLTYSIAYGLIGGICTYIVLHIWD 541 (581)
Q Consensus 477 P~aalagaLIlvG~~m~~~l~~I~~~~~~e~ipaf~tiv~~plt~sI~~GI~~G~i~yvil~l~~ 541 (581)
-.. .+.- +.-+.-...+++.++.|....+..+++.++..+..++..|+.++++.++......
T Consensus 366 li~--~~~~-l~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~Gi~vGv~~s~~~~~~~~~~p 427 (563)
T TIGR00815 366 IIS--AVRG-LIDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSAAFLLLRIARP 427 (563)
T ss_pred HHH--HHhc-ccCHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 332 2221 3345555677788888988888888888888999999999999999988876554
No 33
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=27.98 E-value=63 Score=27.82 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHhCCcccc-cc
Q 008018 132 TVASSLIGCVIMGAFANLPLAL-AP 155 (581)
Q Consensus 132 t~l~agigtLl~gl~a~lP~~l-~p 155 (581)
.+.++.++.++.++++..|... +|
T Consensus 48 GLy~a~~~~liyalfG~s~~~~~Gp 72 (84)
T PF13792_consen 48 GLYAAIIPPLIYALFGSSRHMIVGP 72 (84)
T ss_pred eeHHHHHHHHHHhhccCCCccccCh
Confidence 3467888888899888877765 55
No 34
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=26.35 E-value=5.6e+02 Score=25.49 Aligned_cols=50 Identities=18% Similarity=0.194 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhceeeec-CCCCCCCCcccccccCCC
Q 008018 522 SIAYGLIGGICTYIVLHIWDWGHKSLVKIGVVKK-KSSGVSGAPQQIREGDGN 573 (581)
Q Consensus 522 sI~~GI~~G~i~yvil~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 573 (581)
++...-.+-.++|+++-++. ..-++++..+.+ +++-++.-||+.+.|+..
T Consensus 135 ~~s~s~~~~ti~yIiL~iLf--~~Ya~nl~~~~~~~~~~~~~C~r~~~~g~k~ 185 (189)
T PF05313_consen 135 SVSGSSGAYTISYIILAILF--CIYAFNLTGRSRIRSSSSTKCPREVYAGNKY 185 (189)
T ss_pred hhhHhHHHHHHHHHHHHHHH--HHheeeccchhhcccCchhhchhhccCcccc
Confidence 44444556667777765554 233344444433 577777888888887643
No 35
>PF03356 Pox_LP_H2: Viral late protein H2; InterPro: IPR005023 This entry represents the late protein H2 found in Vaccinia and other poxviruses. This protein is a highly conserved viral membrane protein found in all sequenced poxviruses, containing an N-terminal transmembrane domain and four conserved cysteines thought to be involved in the formation of intramolecular disulphide bonds []. H2 has been shown to be necessary for entry into the host cell and virus-induced cell-cell fusion, but is not required for virus morphogenesis or the attachment of virus particles to cells. It is part of an entry-fusion complex composed of eight viral membrane proteins [].
Probab=24.65 E-value=28 Score=34.09 Aligned_cols=19 Identities=53% Similarity=0.908 Sum_probs=10.7
Q ss_pred CCcccccccCCCC----Cccccc
Q 008018 562 GAPQQIREGDGNG----KANEIE 580 (581)
Q Consensus 562 ~~~~~~~~~~~~~----~~~~~~ 580 (581)
=-||.||.|+|+| ||+++.
T Consensus 119 fLPqaIrRG~GDgWmvkKA~kvD 141 (189)
T PF03356_consen 119 FLPQAIRRGDGDGWMVKKAAKVD 141 (189)
T ss_pred ccHHHHhcCCCCceeEeeccccC
Confidence 3466666666665 455543
No 36
>PF07613 DUF1576: Protein of unknown function (DUF1576); InterPro: IPR011470 This small family is found in several undescribed proteins. The alignment is distinguished by the frequent occurrence of conserved glycine and aromatic residues.
Probab=23.82 E-value=4.9e+02 Score=25.84 Aligned_cols=84 Identities=19% Similarity=0.299 Sum_probs=47.4
Q ss_pred ccchhHHHHHHHHHHHHH-HH--HHHhhcChHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHH--H----
Q 008018 451 RTGLTALTVAGYFFLALF-FT--PLLASIPAWAVGPPLILVGVLMMRSVVEIEWDDMRQAIPAFLTLILMPLT--Y---- 521 (581)
Q Consensus 451 rTglsavv~g~~fll~lf-l~--Pli~~IP~aalagaLIlvG~~m~~~l~~I~~~~~~e~ipaf~tiv~~plt--~---- 521 (581)
|..+..-+.+.++.++-| +. -+...+|. +.|+...+-+++.+.++ ..++++.-..+-|+. +
T Consensus 58 ~~~lnGp~iaaiftv~GFs~FGKn~~Ni~PI--------~lGv~Lys~~~~~~~~~--~il~aLFgT~LAPi~s~~~f~~ 127 (183)
T PF07613_consen 58 KGKLNGPTIAAIFTVVGFSAFGKNIKNIWPI--------ILGVYLYSKLSKEPFSS--YILIALFGTALAPIVSEFAFGL 127 (183)
T ss_pred CCCCCcHHHHHHHHHHHHHHcCCcHHHHhHH--------HHHHHHHHHHcCCChHH--HHHHHHHHhhHHHHHHHHHHhc
Confidence 344555555555543222 11 27888885 67888877666655544 233333333333544 4
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHH
Q 008018 522 -------SIAYGLIGGICTYIVLHIWDWGH 544 (581)
Q Consensus 522 -------sI~~GI~~G~i~yvil~l~~~~~ 544 (581)
++..|+..|++...+.+-..+.+
T Consensus 128 ~~~~~~lG~~~Gi~~Gfi~~~la~~~~~~H 157 (183)
T PF07613_consen 128 GLPLPILGILIGIIAGFIHPPLASNFGKLH 157 (183)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 67788888887776665444444
No 37
>COG4392 Predicted membrane protein [Function unknown]
Probab=23.56 E-value=3e+02 Score=25.07 Aligned_cols=66 Identities=18% Similarity=0.262 Sum_probs=41.1
Q ss_pred HHhhcChHHHHHHHHHHHHHHHHHhhcccccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 472 LLASIPAWAVGPPLILVGVLMMRSVVEIEWDD-MRQAIPAFLTLILMPLTYSIAYGLIGGICTYIVLHIW 540 (581)
Q Consensus 472 li~~IP~aalagaLIlvG~~m~~~l~~I~~~~-~~e~ipaf~tiv~~plt~sI~~GI~~G~i~yvil~l~ 540 (581)
.++.+|.++ -.|++.=.+.+-. ...|++- ....+....++++.-+|-|....+..|+.++.+++.+
T Consensus 40 ~L~fvP~a~-ltAL~~p~vl~~~--~g~~~s~~~p~llA~lvav~la~lTrnll~~il~Gm~~~~~lr~~ 106 (107)
T COG4392 40 FLSFVPVAI-LTALIAPDVLMPH--GGLDPSWNNPYLLAGLVAVALAILTRNLLATILVGMASFALLRLF 106 (107)
T ss_pred HHhhccHHH-HHHHHhhhHhccC--CCcchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577788644 3334433333332 2233332 2234455666777678899999999999999988765
No 38
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=21.64 E-value=8.1e+02 Score=26.19 Aligned_cols=121 Identities=14% Similarity=0.123 Sum_probs=58.5
Q ss_pred cCcChhhhhhhHHHHHhhhcCCCccccchhh-hhhhhccc--ccc--hhHHHHHHHHHHHHHHHHHHhhcChHHHHHHH-
Q 008018 412 EGQYFAFMSDAMSIVVGALLGTSPVTTFIES-STGIREGG--RTG--LTALTVAGYFFLALFFTPLLASIPAWAVGPPL- 485 (581)
Q Consensus 412 ~~~~~~LiadGlanivgglfG~~PvTsf~eS-aa~v~aGa--rTg--lsavv~g~~fll~lfl~Pli~~IP~aalagaL- 485 (581)
-+.+++++--++.+++|+++.+..++..+++ ....+.-. ... ...+..+.+-.....+.--..-+|...+=.+.
T Consensus 19 l~~~~A~ila~i~~~lGa~l~G~~V~~ti~~~iv~~~~~~~~~~~~~~~~~~~al~~a~iw~~i~t~~glPvStThalvG 98 (326)
T PF01384_consen 19 LTPRQALILAAIFNFLGALLFGTAVAETIGKGIVDPSYFTVDDPQILMIGMLAALLAAAIWLLIATWLGLPVSTTHALVG 98 (326)
T ss_pred cCHHHHHHHHHHHHHhHHHHhhHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 3567889999999999999988777644433 22222110 001 11122222111222333345567865433221
Q ss_pred HHHHHHHH-HHhhcccccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008018 486 ILVGVLMM-RSVVEIEWDD-MRQAIPAFLTLILMPLTYSIAYGLIGGICTYIVLHIW 540 (581)
Q Consensus 486 IlvG~~m~-~~l~~I~~~~-~~e~ipaf~tiv~~plt~sI~~GI~~G~i~yvil~l~ 540 (581)
-++|.-+. .+...++|++ ... ++.+...+-..+..++.+.|.+++.+
T Consensus 99 al~G~~l~~~g~~~v~w~~~~~~--------I~~~wv~sPlia~~~a~~l~~~~~~~ 147 (326)
T PF01384_consen 99 ALIGAGLASGGFSAVNWSKGLLK--------IVLSWVISPLIAFILAYILYRLIRRI 147 (326)
T ss_pred HHHHHHHHHhhhhhchHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 14444443 2456788872 211 11122234444555565555554433
Done!