Your job contains 1 sequence.
>008019
MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG
YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVS
QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMM
GVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKA
GPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSG
VDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGP
TGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSP
SRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCEGNESILKTLWHHSDAVLCC
SLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQS
GICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008019
(581 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 2407 6.4e-250 1
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 2355 2.1e-244 1
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 1841 6.0e-190 1
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 1817 2.1e-187 1
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 1749 3.4e-180 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 156 1.0e-10 2
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 174 2.6e-10 2
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 127 4.3e-06 2
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 2407 (852.4 bits), Expect = 6.4e-250, P = 6.4e-250
Identities = 455/584 (77%), Positives = 520/584 (89%)
Query: 1 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 60
MQLYAPTTLAPARDFW+LRYTSV+EDGSLV+CERSLNNTQNGPSMP +PHFVRAE+LPSG
Sbjct: 255 MQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVRAEILPSG 314
Query: 61 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVS 120
YLIRPCEGGGSI+HIVDH DLEPWSVPEVLR LYESSTL+AQ+TTMAALR+LRQISQE+S
Sbjct: 315 YLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAALRYLRQISQEIS 374
Query: 121 QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMM 180
QP+VTGWGRRPAALRALSQRLS+GFNEA+NGF+DEGWS+LESDGIDDVT+ VNSSP+KMM
Sbjct: 375 QPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDVTLLVNSSPTKMM 434
Query: 181 GVQ-LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWXXXXXXXXXXXXVK 239
L + NG+ SM +AVLCAKASMLLQ+VPP+ILLRFLREHR EW +K
Sbjct: 435 MTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEWADNSIDAYSAAAIK 494
Query: 240 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 299
AGPCSLP+PR G+FGGQVILPLAHTIE+EEF+EVIKLE++ HY+EDM+MP+DIFLLQ+CS
Sbjct: 495 AGPCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKLESLGHYQEDMMMPADIFLLQMCS 554
Query: 300 GVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVG 359
GVDENAV +CAEL+FAPIDASFSDDAPIIPSGFRIIPLDS + SPNRTLDLASAL+VG
Sbjct: 555 GVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKSEGLSPNRTLDLASALDVG 614
Query: 360 PTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALS 419
++ +GDS G++KSV+TIAFQ AFEMH+QENVASMARQYVR +IASVQRVALALS
Sbjct: 615 ---SRTAGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVRSVIASVQRVALALS 671
Query: 420 PSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCEGNESILKTLWHHSDAVLC 479
PS +GLRPPP SPEAHTLARWI SYRCYLG +LLK G + +LK+LWHH DAV+C
Sbjct: 672 PSSH-QLSGLRPPPASPEAHTLARWISHSYRCYLGVDLLKPHGTD-LLKSLWHHPDAVMC 729
Query: 480 CSLKAL-PVFTFANQAGLDMLETTLVALQDITLEKIFDDS-GRKTLCSEFPQIMQQGFMC 537
CSLKAL PVFTFANQAGLDMLETTLVALQDITL+KIFD++ G+KTL SEFPQIMQQGFMC
Sbjct: 730 CSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKKTLSSEFPQIMQQGFMC 789
Query: 538 LQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 581
+ GIC+SSMGR ++YE+AV WKVLN++E+ HCICFMF+NWSF+
Sbjct: 790 MDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNWSFI 833
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 2355 (834.1 bits), Expect = 2.1e-244, P = 2.1e-244
Identities = 455/586 (77%), Positives = 501/586 (85%)
Query: 1 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 60
MQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL +TQNGPSMP +FVRAEML SG
Sbjct: 256 MQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEMLSSG 315
Query: 61 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVS 120
YLIRPC+GGGSIIHIVDHMDLE SVPEVLRPLYES ++AQKTTMAALR L+QI+QEV+
Sbjct: 316 YLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQIAQEVT 375
Query: 121 QP--SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSK 178
Q SV GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWS++ D +DDVT+ VNSSP K
Sbjct: 376 QTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSMDDVTITVNSSPDK 434
Query: 179 MMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWXXXXXXXXXXXXV 238
+MG+ L++ NGF +SN VLCAKASMLLQ+VPPAILLRFLREHRSEW V
Sbjct: 435 LMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYLAAAV 494
Query: 239 KAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLC 298
K GPCS R G FGGQVILPLAHTIEHEEF+EVIKLE + H ED I+P DIFLLQLC
Sbjct: 495 KVGPCSA---RVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIFLLQLC 551
Query: 299 SGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK-DTPSPNRTLDLASALE 357
SG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDS K + SPNRTLDLASALE
Sbjct: 552 SGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQEVSSPNRTLDLASALE 611
Query: 358 VGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALA 417
+G G KAS D S +SV+TIAF+F E H+QE+VASMARQYVRGII+SVQRVALA
Sbjct: 612 IGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIISSVQRVALA 671
Query: 418 LSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKC--EGNESILKTLWHHSD 475
LSPS S GLR P G+PEA TLARWICQSYR Y+G ELLK +GNESILK LWHH+D
Sbjct: 672 LSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTD 731
Query: 476 AVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGF 535
A++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRKTLCSEFPQIMQQGF
Sbjct: 732 AIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGF 791
Query: 536 MCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 581
CLQ GICLSSMGRP+SYERAVAWKVLNEEENAHCICF+FINWSFV
Sbjct: 792 ACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 837
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 1841 (653.1 bits), Expect = 6.0e-190, P = 6.0e-190
Identities = 366/590 (62%), Positives = 446/590 (75%)
Query: 2 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 61
Q+YAPTTLA ARDFW LRY++ LEDGS VVCERSL + GP+ P + +FVRAEM PSG+
Sbjct: 270 QMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFVRAEMKPSGF 329
Query: 62 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQ 121
LIRPC+GGGSI+HIVDH+DL+ WSVPEV+RPLYESS ++AQK T+AALRH+RQI+QE S
Sbjct: 330 LIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHVRQIAQETSG 389
Query: 122 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 181
G GR+PA LR SQRL RGFN+A+NGF D+GWS + SDG +DVTV +N SP K G
Sbjct: 390 EVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMINLSPGKFGG 449
Query: 182 VQLSYVNGF-PSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWXXXXXXXXXXXXVKA 240
Q Y N F PS + VLCAKASMLLQ+VPPA+L+RFLREHRSEW ++A
Sbjct: 450 SQ--YGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVDAYAAASLRA 507
Query: 241 GPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 299
P ++P RAG F QVILPLA T+EHEE LEV++LE A+ EDM + D++LLQLCS
Sbjct: 508 SPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLARDMYLLQLCS 567
Query: 300 GVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTP---SPNRTLDLASAL 356
GVDEN VG CA+LVFAPID SF+DDAP++PSGFRIIPL+ K TP S NRTLDLASAL
Sbjct: 568 GVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQ-KSTPNGASANRTLDLASAL 626
Query: 357 EVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVAL 416
E G T + +G++ + +SV+TIAFQF F+ H +++VASMARQYVR I+ S+QRVAL
Sbjct: 627 E-GST--RQAGEADPNGCNFRSVLTIAFQFTFDNHSRDSVASMARQYVRSIVGSIQRVAL 683
Query: 417 ALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCEGNES---ILKTLWHH 473
A++P R GSN P SPEA TL RWI +SY + GA+L + S +L LW+H
Sbjct: 684 AIAP-RPGSNISPISVPTSPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTLLHQLWNH 742
Query: 474 SDAVLCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIM 531
SDA+LCCSLK A PVFTFANQ GLDMLETTLVALQDI L+K D+ GRK LCSEFP+IM
Sbjct: 743 SDAILCCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIM 802
Query: 532 QQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 581
QQG+ L +G+C SSMGR +SYE+A WKVL ++E+ HC+ FMF+NWSFV
Sbjct: 803 QQGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV 852
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 1817 (644.7 bits), Expect = 2.1e-187, P = 2.1e-187
Identities = 358/594 (60%), Positives = 449/594 (75%)
Query: 1 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 60
MQ YAPTTLAPARDFW LRYT+ L++GS VVCERSL+ + GP+ A FVRAEML SG
Sbjct: 256 MQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSG 315
Query: 61 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVS 120
YLIRPC+GGGSIIHIVDH++LE WSVP+VLRPLYESS ++AQK T++ALR++RQ++QE +
Sbjct: 316 YLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQESN 375
Query: 121 QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMM 180
V G GR+PA LR SQRLSRGFN+A+NGF D+GWS + DG +D+ V +NS+
Sbjct: 376 GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTK---- 431
Query: 181 GVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWXXXXXXXXXXXXVKA 240
L+ ++ S VLCAKASMLLQ+VPPA+L+RFLREHRSEW +KA
Sbjct: 432 --HLNNISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAATLKA 489
Query: 241 GPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 299
G + P R F G Q+I+PL HTIEHEE LEV++LE + +ED M D+ LLQ+C+
Sbjct: 490 GSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICT 549
Query: 300 GVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDS--G--KDTPSPN-RTLDLAS 354
G+DENAVG C+EL+FAPI+ F DDAP++PSGFR+IP+D+ G +D + N RTLDL S
Sbjct: 550 GIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTS 609
Query: 355 ALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRV 414
+LEVGP+ ASG+S + S++ ++TIAFQF FE +LQENVA MA QYVR +I+SVQRV
Sbjct: 610 SLEVGPSPENASGNSFSS-SSSRCILTIAFQFPFENNLQENVAGMACQYVRSVISSVQRV 668
Query: 415 ALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCEG---NESILKTLW 471
A+A+SPS + G + PGSPEA TLA+WI QSY +LG+ELL + ++S+LK LW
Sbjct: 669 AMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDSVLKLLW 728
Query: 472 HHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIM 531
H DA+LCCSLK PVF FANQAGLDMLETTLVALQDITLEKIFD+SGRK +CS+F ++M
Sbjct: 729 DHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLM 788
Query: 532 QQGFMCLQSGICLSSMGRPISYERAVAWKVL--NEEEN--AHCICFMFINWSFV 581
QQGF CL SGIC+S+MGR +SYE+AVAWKV +EE N HC+ F F+NWSFV
Sbjct: 789 QQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 1749 (620.7 bits), Expect = 3.4e-180, P = 3.4e-180
Identities = 352/591 (59%), Positives = 440/591 (74%)
Query: 2 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 61
Q+YAPTTLA ARDFW LRY++ LEDGS VVCERSL + GP+ P + FVRA+ML SG+
Sbjct: 266 QIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGF 325
Query: 62 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQ 121
LIRPC+GGGSIIHIVDH+DL+ SVPEVLRPLYESS ++AQK T+AALRH+RQI+QE S
Sbjct: 326 LIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHVRQIAQETSG 385
Query: 122 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 181
GR+PA LR SQRL RGFN+A+NGF D+GWS + SDG +D+T+ +NSS +K G
Sbjct: 386 EVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMINSSSAKFAG 445
Query: 182 VQLSYVNGF-PSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWXXXXXXXXXXXXVKA 240
Q Y + F PS + VLCAKASMLLQ+VPP +L+RFLREHR+EW ++A
Sbjct: 446 SQ--YGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAYSAASLRA 503
Query: 241 GPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 299
P ++P R G F QVILPLA T+EHEEFLEV++L A+ EDM + D++LLQLCS
Sbjct: 504 TPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDMYLLQLCS 563
Query: 300 GVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD---SGKDTPSPNRTLDLASAL 356
GVDEN VG CA+LVFAPID SF+DDAP++PSGFR+IPLD + D S +RT DLAS+L
Sbjct: 564 GVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQKTNPNDHQSASRTRDLASSL 623
Query: 357 EVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVAL 416
+ G T DS T +++ V+TIAFQF F+ H ++NVA+MARQYVR ++ S+QRVAL
Sbjct: 624 D-GSTKT----DSET---NSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVVGSIQRVAL 675
Query: 417 ALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCE----GNESILKTLWH 472
A++P R GS P SPEA TL RWI +SY + GA+L + G +++LK LW
Sbjct: 676 AITP-RPGS----MQLPTSPEALTLVRWITRSYSIHTGADLFGADSQSCGGDTLLKQLWD 730
Query: 473 HSDAVLCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQI 530
HSDA+LCCSLK A PVFTFANQAGLDMLETTLVALQDI L+K DDSGR+ LCSEF +I
Sbjct: 731 HSDAILCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKI 790
Query: 531 MQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 581
MQQG+ L +GIC+SSMGRP+SYE+A WKV+++ E+ HC+ F ++WSFV
Sbjct: 791 MQQGYANLPAGICVSSMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV 841
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 156 (60.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 2 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 61
+ P+ L P R+ + +RY DG V + SL++ + P R+ PSG
Sbjct: 375 EFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGC 427
Query: 62 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVS 120
LI+ + G S + V+H++++ SV + +PL + K +A L R +++ ++
Sbjct: 428 LIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMA 487
Query: 121 Q--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 173
P+ +T R + L+ L++R+ F + T W+ L + G DDV V
Sbjct: 488 SNIPACDLSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDVRVMTR 546
Query: 174 SS---PSKMMGVQLSYVNGF 190
S P + G+ LS F
Sbjct: 547 KSMDDPGRPPGIVLSAATSF 566
Score = 77 (32.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 323 DDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSST-QCGSTKSVIT 381
D ++PSGF I+P D + + +E G GN ++T CG S++T
Sbjct: 663 DYVALLPSGFAILP-DGSARGGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGG--SLLT 719
Query: 382 IAFQFAFEMHLQENVASMARQYVRGII-ASVQRVALALS 419
+AFQ + ++ + V +I +V+R+ AL+
Sbjct: 720 VAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALA 758
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 174 (66.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 2 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 61
+ P+ L P R+ + +RY DGS V + SL++ + PS P +R PSG
Sbjct: 366 EFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR--PSTP----ILRTRRRPSGC 419
Query: 62 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVS 120
LI+ G S + ++HM+++ SV + +PL +S K +A L R +++ ++
Sbjct: 420 LIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMA 479
Query: 121 Q--PS----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNS 174
P +T R + L+ L++R+ F + T W+ + + G DDV V
Sbjct: 480 SNIPGDLSVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRK 538
Query: 175 S---PSKMMGVQLSYVNGF 190
S P + G+ LS F
Sbjct: 539 SMDDPGRPPGIVLSAATSF 557
Score = 54 (24.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 25/98 (25%), Positives = 43/98 (43%)
Query: 323 DDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITI 382
D ++PSGF I+P D N+ ++ S SS CG S++T+
Sbjct: 654 DYVALLPSGFAILP-DGSVGGGDGNQHQEMVSTT------------SSGSCGG--SLLTV 698
Query: 383 AFQFAFEMHLQENVASMARQYVRGII-ASVQRVALALS 419
AFQ + ++ + V +I +V+R+ A+S
Sbjct: 699 AFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVS 736
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 127 (49.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 60/234 (25%), Positives = 97/234 (41%)
Query: 2 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 61
+ P+ L P R+ + RY DGS V + SL++ Q P+ P R SG
Sbjct: 359 EFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQ--PNPP-----ARCRRRASGC 411
Query: 62 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ--- 117
LI+ G S + V+H++++ V + + + + K +A L R +++
Sbjct: 412 LIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMA 471
Query: 118 -EVSQPSV---TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 173
+S V T R + L+ L++R+ F ++ T W+ L G +DV V
Sbjct: 472 TNISSGEVGVITNQEGRRSMLK-LAERMVISFCAGVSASTAHTWTTLSGTGAEDVRVMTR 530
Query: 174 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 225
S G P VL A S + VPP + FLR+ R+EW
Sbjct: 531 KSVDDP---------GRPP--GIVLSAATSFWIP-VPPKRVFDFLRDENSRNEW 572
Score = 62 (26.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 37/147 (25%), Positives = 64/147 (43%)
Query: 276 LENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID--ASFSDDAPIIPSGFR 333
++ MAH + + LL++ S ++ N L + D ASF AP+
Sbjct: 581 VQEMAHIANGRDTGNCVSLLRVNSA--NSSQSNMLILQESCTDPTASFVIYAPVDIVAMN 638
Query: 334 IIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQ 393
I+ L+ G P+ L S + P GN SG G S++T+AFQ +
Sbjct: 639 IV-LNGG----DPDYVALLPSGFAILPDGNANSGAPG---GDGGSLLTVAFQILVDSVPT 690
Query: 394 ENVASMARQYVRGIIA-SVQRVALALS 419
++ + V +IA +V+R+ ++S
Sbjct: 691 AKLSLGSVATVNNLIACTVERIKASMS 717
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 581 569 0.00079 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 625 (66 KB)
Total size of DFA: 335 KB (2168 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.76u 0.19s 45.95t Elapsed: 00:00:02
Total cpu time: 45.76u 0.19s 45.95t Elapsed: 00:00:02
Start: Sat May 11 14:30:08 2013 End: Sat May 11 14:30:10 2013