BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008022
         (581 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
           OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
          Length = 659

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/581 (57%), Positives = 432/581 (74%), Gaps = 14/581 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI KL    ++D VQYLLQQMK++G  CSE +FISVI+ YR+VGLAE+A++MFYRI+EFG
Sbjct: 82  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+VKIYNH+LD LL ENR  MI  +Y +MKRDG EPNVFTYN+LLKALCKNN+VDGA 
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLLVEM NKGC PDAVSYTT++SS+C++G V+E RELA RF   VSVYNALINGLCKEH 
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHD 261

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            + AF L+ EMV++GI PNVI+YST+I+ LC+ G +E +   L QM  RGC+PNI++ +S
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321

Query: 241 LLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           L+KG  L G T +A DLWN+MIR  G  PNVVAY+TL+ G CS+G++ +AVSV   MEE 
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C PN+ TY +LI+GFAK G+L GA  IWN+M+++GC PNVV YT MV+ LC+++ F +A
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELLD 418
            SLIE M+ ENC P+  TFN FIKGLC  GR+DWA K+  QM +Q+ C PNI TYNELLD
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL + NR++EA+ L  EI   G++ +  TYNT+LHG C AG+   A QL+GKM+++G   
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIR-GGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           D IT N+II AYCKQGK   A Q+LD +  G  +W PD+ISYT+++WG+C S   ++  I
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 621

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
            L++M++ GI P+ ATW+VL+             +ILDDI+
Sbjct: 622 LLERMISAGIVPSIATWSVLIN-----------CFILDDIV 651



 Score =  167 bits (423), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 192/395 (48%), Gaps = 7/395 (1%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +  +I  L  + +++   +LL +M  +G   +   + ++IS    VG  E ++ +  ++ 
Sbjct: 79  FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             GC+P++  +  +L   L   R      ++  M R+GF PNV  Y+ L+  LC N  +D
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A  +  +M    C P+  +Y+ +I    + G +    ++  R       P V  Y  ++
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALI 253

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+ + +  A  L+ +M  +   PN ++++T I  LC  G+++ A   L QM +  C 
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTE-IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           PNI T + L+ G        +A +L  + I   G+Q N+V YNT++ G C  G +V+A  
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVS 373

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +   M   G   +  T+  +I  + K+G ++ A+ + +++   G   P+++ YT+++  +
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG-CCPNVVVYTNMVEAL 432

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C     +EA   ++ M  E   P+  T+N  ++ L
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467



 Score =  150 bits (378), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 176/345 (51%), Gaps = 7/345 (2%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F  +++   + G+      L  +M  +GF  +   + ++I      G  + AV + Y++
Sbjct: 78  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +E  C P+V  Y+ ++D       +     ++  M  +G  PNV  Y  ++K LC+NN  
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  L+ +M+ + C P+ V++ T I  +C  G V    +L ++ +     P ++ YN L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNAL 252

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++GL + +  K AFEL+ E+ + GI  N+++Y+T+++ +C +G +  AF  L +ML  G 
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T + ++     +G   +A+ L +++  G    P++++Y +L+ G C+ G + +A 
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYILDDIMAN 580
                M   G  PN  T+  L+   F+  G L G VYI + ++ +
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLING-FAKRGSLDGAVYIWNKMLTS 416



 Score = 99.4 bits (246), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 123/251 (49%), Gaps = 29/251 (11%)

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + +  M++ L  +        L+++M  +    +   F + I      G  + A+++  +
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           +K++ C P++  YN +LD LL  NR++  + +  ++++ G + N+ TYN +L  +C+   
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-------------- 506
           V  A +LL +M  +G   DA+++  +I + C+ G V    +L +R               
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256

Query: 507 ------RGGGEW---------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
                 +G  E          +P++ISY++L+  +CNSG ++ AF +L +ML  G  PN 
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316

Query: 552 ATWNVLVRSLF 562
            T + LV+  F
Sbjct: 317 YTLSSLVKGCF 327


>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
           SV=1
          Length = 730

 Score =  337 bits (863), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 187/567 (32%), Positives = 306/567 (53%), Gaps = 16/567 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           +I KLG   E   +  LL QMK EG+   E +FIS++  Y + G   Q  ++   +R  +
Sbjct: 117 LIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVY 176

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PT K YN +L+ L++ N   +   ++ +M    + P +FT+ +++KA C  N +D A
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL +M   GC P++V Y T++ S+ K  +V EA +L      M        +N +I G
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +I EA  ++  M+ RG  P+ ITY  +++ LC +G V+ +      +F R   P 
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPE 352

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           I  F +L+ G++  GR  +A  + + M+   G +P+V  Y++LI+G    G +  A+ V 
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           + M    C PNV +Y+ L+DGF K G +  A  + N M ++G  PN V + C++   C+ 
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           +   +A  +  +M  + C P+  TFN+ I GLC    +  A+ LL  M     + N  TY
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L++  LR   +KEA +LV E+   G  L+ +TYN+++ G+CRAG V +A  L  KML 
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR--IRGGGEWNPDIISYTSLLWGICNSGG 531
           +G     I+ NI+I   C+ G V  A++      +RG     PDI+++ SL+ G+C +G 
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS---TPDIVTFNSLINGLCRAGR 649

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLV 558
           +++     +K+  EGI P+  T+N L+
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLM 676



 Score =  241 bits (614), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 271/540 (50%), Gaps = 39/540 (7%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G + +  +Y  ++  L A   F  I+ +   MK +G+      +  +++   K       
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165

Query: 120 YKLLVEMGN-KGCAPDAVSYTTI----VSSIC-KLGQVEEARELAMRFGSGVSVYNALIN 173
            +L++EM N   C P   SY  +    VS  C K+        L+ +    +  +  ++ 
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
             C  ++I+ A  LL +M   G  PN + Y T+I SL     V  +L +L +MF+ GC P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN------------------------ 269
           +  +F  ++ G     R +EA+ + NRM+  GF P+                        
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345

Query: 270 -------VVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCPPNVTTYSALIDGFAKAGNL 321
                  +V ++TLIHG  ++G +D+A +V   M  +    P+V TY++LI G+ K G +
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A ++ + M + GC PNV +YT +V   C+     +A++++ +M+ +   PNTV FN  
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I   C   R+  A+++  +M +  C P++ T+N L+ GL  V+ +K A  L+ ++   G+
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N VTYNT+++   R G + EA +L+ +M+ +G+ LD IT+N +I   C+ G+V+ A  
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L +++   G   P  IS   L+ G+C SG ++EA  + ++M+  G  P+  T+N L+  L
Sbjct: 586 LFEKMLRDGH-APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644



 Score =  134 bits (337), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 150/290 (51%), Gaps = 8/290 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ID    +L +M  +G+  +   F  +I+++ +     +A+++F  +   G KP
Sbjct: 436 KLGK---IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  +N ++  L   +       +  +M  +G+  N  TYN L+ A  +   +  A KL+
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKE 178
            EM  +G   D ++Y +++  +C+ G+V++AR L    +R G   S    N LINGLC+ 
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             +EEA     EMV RG  P+++T++++I+ LC  G +E  L +  ++   G  P+  +F
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            +L+     GG  ++A  L +  I +GF+PN   +S L+  +    ++D 
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  129 bits (324), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 7/298 (2%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           + G+  +   Y  LI  L +NG       +  QM++       + + +++  + KAG   
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163

Query: 323 GASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             +++   M +   C P   +Y  ++++L   N    A ++   M     PP   TF   
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K  C    +D A+ LL  M ++ C+PN   Y  L+  L + NRV EA +L+ E+   G 
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             +  T+N ++ G+C+   + EA +++ +MLI G   D IT+  ++   CK G+V+ A  
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE-GICPNFATWNVLV 558
           L  RI       P+I+ + +L+ G    G + +A   L  M+   GI P+  T+N L+
Sbjct: 344 LFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396



 Score = 53.1 bits (126), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 73/155 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    E+D  + L ++M  +G + S      +IN   R G+ E+A++    +   G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  +N +++ L    R      ++  ++ +G+ P+  T+N L+  LCK   V  A 
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            LL E    G  P+  +++ ++ SI     ++  R
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724


>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
          Length = 754

 Score =  312 bits (799), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 182/603 (30%), Positives = 310/603 (51%), Gaps = 43/603 (7%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF-YRIREFGLK 62
           +LG     D ++ +L+ MK          F+ +I SY +  L ++ L +  + I EFGLK
Sbjct: 92  RLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLK 151

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    YN +L+ L+  N   ++   ++ M   G++P+V T+N+L+KALC+ +++  A  +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 123 LVEMGNKGCAPDAVSYTT-----------------------------------IVSSICK 147
           L +M + G  PD  ++TT                                   IV   CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 148 LGQVEEA----RELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            G+VE+A    +E++ +  F      +N L+NGLCK   ++ A  ++  M+  G DP+V 
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+++IS LC +G V+ ++ +L QM  R C+PN  ++ +L+       +  EA++L   +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G LP+V  +++LI GLC   +   A+ +  +M    C P+  TY+ LID     G L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +  +M  +GC+ +V+ Y  ++   C+ N   +A  + ++M       N+VT+NT 
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC   RV+ A +L+DQM      P+  TYN LL    R   +K+A ++V  +   G 
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + +IVTY T++ G+C+AG V  A +LL  + ++G  L    +N +I    ++ K   AI 
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           L   +    E  PD +SY  +  G+CN GG ++EA  +L ++L +G  P F++  +L   
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691

Query: 561 LFS 563
           L +
Sbjct: 692 LLT 694



 Score =  130 bits (328), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 145/301 (48%), Gaps = 3/301 (0%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           +  F P    Y  ++  L  +GS D+   +   M+ + C    +T+  LI+ +A+     
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135

Query: 323 GASQIWNRMISN-GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
               + + MI   G  P+   Y  M+ +L   N          KM+     P+  TFN  
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           IK LC   ++  A+ +L+ M  Y  +P+  T+  ++ G +    +  A  +  ++ + G 
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             + V+ N I+HG C+ G V +A   + +M   +G   D  TFN ++   CK G V +AI
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +++D +   G ++PD+ +Y S++ G+C  G ++EA   L +M+     PN  T+N L+ +
Sbjct: 316 EIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374

Query: 561 L 561
           L
Sbjct: 375 L 375



 Score =  108 bits (271), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 127/253 (50%), Gaps = 7/253 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K ++D    +L+QM++ G + S   + ++I+ + +     +A ++F  +   G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++D L    R      +   M  +G +P+ +TYN LL   C+   +  A 
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVSV----YNALINGL 175
            ++  M + GC PD V+Y T++S +CK G+VE A +L       G+++    YN +I GL
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620

Query: 176 CKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGN-VETSLGILGQMFVRGCNP 233
            ++ K  EA  L  EM+++    P+ ++Y  +   LC+ G  +  ++  L ++  +G  P
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680

Query: 234 NIHSFTSLLKGYL 246
              S   L +G L
Sbjct: 681 EFSSLYMLAEGLL 693


>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
           OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
          Length = 915

 Score =  291 bits (744), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 165/537 (30%), Positives = 281/537 (52%), Gaps = 7/537 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           G + +++NS  R GL ++  +++  + E  + P +  YN +++           N   S 
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           +   G++P+ FTY  L+   C+   +D A+K+  EM  KGC  + V+YT ++  +C   +
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303

Query: 151 VEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           ++EA +L ++         V  Y  LI  LC   +  EA  L+ EM + GI PN+ TY+ 
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I SLC     E +  +LGQM  +G  PN+ ++ +L+ GY   G   +A D+   M    
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PN   Y+ LI G C + ++ +A+ V  +M E    P+V TY++LIDG  ++GN   A 
Sbjct: 424 LSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ + M   G  P+   YT M+  LC++    +A  L + +  +   PN V +   I G 
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G+VD A  +L++M    CLPN  T+N L+ GL    ++KEA  L  ++ K G+Q  +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            T   ++H + + G    A+    +ML  GTK DA T+   I  YC++G++ +A  ++ +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +R  G  +PD+ +Y+SL+ G  + G    AF  L++M + G  P+  T+  L++ L 
Sbjct: 663 MRENG-VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718



 Score =  263 bits (671), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 169/630 (26%), Positives = 294/630 (46%), Gaps = 67/630 (10%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D ++ +  +M  + V  +   +  ++N Y ++G  E+A +   +I E GL P    Y  
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++              +++ M   G   N   Y  L+  LC   R+D A  L V+M +  
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318

Query: 131 CAPDAVSYTTIVSSIC-------KLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
           C P   +YT ++ S+C        L  V+E  E  ++    +  Y  LI+ LC + K E+
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK--PNIHTYTVLIDSLCSQCKFEK 376

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  LL +M+++G+ PNVITY+ +I+  C  G +E ++ ++  M  R  +PN  ++  L+K
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY      H+A  + N+M+    LP+VV Y++LI G C +G+ D A  +   M +    P
Sbjct: 437 GY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY+++ID   K+  +  A  +++ +   G +PNVV YT ++   C+     +AH ++
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           EKM  +NC PN++TFN  I GLC  G++  A  L ++M +    P ++T   L+  LL+ 
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
                A+    ++   G + +  TY T +   CR G +++A  ++ KM   G   D  T+
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGG--------------------------------- 510
           + +I  Y   G+ N A  +L R+R  G                                 
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735

Query: 511 ----EWN---------------PDIISYTSLLWGICNSGGMQEA---FIYLQKMLNEGIC 548
               E++               P+  SY  L+ GIC  G ++ A   F ++Q+  NEGI 
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR--NEGIS 793

Query: 549 PNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           P+   +N L+        H     ++DD++
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMI 823



 Score =  241 bits (615), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 258/494 (52%), Gaps = 16/494 (3%)

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
           NP Y +        +V++Y  LL  L  N  V   +K+ + M  K C  D+V     V  
Sbjct: 116 NPRYKH--------SVYSYASLLTLLINNGYVGVVFKIRLLMI-KSC--DSVGDALYVLD 164

Query: 145 ICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           +C+    +E  EL  +   G   YN L+N L +   ++E   +  EM++  + PN+ TY+
Sbjct: 165 LCRKMNKDERFELKYKLIIGC--YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +++  C +GNVE +   + ++   G +P+  ++TSL+ GY        A  ++N M  +
Sbjct: 223 KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   N VAY+ LIHGLC    +DEA+ +  +M+++ C P V TY+ LI     +     A
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             +   M   G  PN+  YT ++  LC    F +A  L+ +M  +   PN +T+N  I G
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G ++ A+ +++ M+  +  PN  TYNEL+ G  + N V +A  ++ ++ +  +  +
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPD 461

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +VTYN+++ G CR+G    A++LL  M   G   D  T+  +I + CK  +V  A  L D
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +   G  NP+++ YT+L+ G C +G + EA + L+KML++   PN  T+N L+  L ++
Sbjct: 522 SLEQKG-VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580

Query: 565 LGHLGPVYILDDIM 578
            G L    +L++ M
Sbjct: 581 -GKLKEATLLEEKM 593



 Score =  238 bits (608), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 288/579 (49%), Gaps = 24/579 (4%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           ++ ++D    +  +M ++G   +E  +  +I+        ++A+ +F ++++    PTV+
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  ++ +L    R S    +   M+  G++PN+ TY +L+ +LC   + + A +LL +M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKI 181
             KG  P+ ++Y  +++  CK G +E+A ++     + +       YN LI G CK + +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-V 443

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            +A  +L +M++R + P+V+TY+++I   C  GN +++  +L  M  RG  P+  ++TS+
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +       R  EA DL++ + ++G  PNVV Y+ LI G C  G +DEA  +  +M   +C
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  T++ALI G    G L  A+ +  +M+  G  P V   T ++  L ++  F  A+S
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
             ++M      P+  T+ TFI+  C  GR+  A  ++ +M++    P++ TY+ L+ G  
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG---------------VCRAGMVVE--- 463
            + +   AF+++  +   G + +  T+ +++                 +C    ++E   
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             +LL KM+      +A ++  +I   C+ G +  A ++ D ++     +P  + + +LL
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              C      EA   +  M+  G  P   +  VL+  L+
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842



 Score =  209 bits (531), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 253/534 (47%), Gaps = 25/534 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  +C+ +  + LL QM  +G+  +   + ++IN Y + G+ E A+ +   +    
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P  + YN ++      N    +  +   ++R  + P+V TYN L+   C++   D AY
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDSAY 482

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           +LL  M ++G  PD  +YT+++ S+CK  +VEEA +L            V +Y ALI+G 
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K++EA  +L +M+ +   PN +T++ +I  LC  G ++ +  +  +M   G  P +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            + T L+   L  G    A   + +M+  G  P+   Y+T I   C  G + +A  +  +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ--- 352
           M EN   P++ TYS+LI G+   G    A  +  RM   GC P+   +  ++K L +   
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722

Query: 353 -------------NNM--FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
                        +NM  F     L+EKM   +  PN  ++   I G+C  G +  A K+
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKV 782

Query: 398 LDQMKQYECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
            D M++ E + P+   +N LL    ++ +  EA ++V ++   G    + +   ++ G+ 
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           + G       +   +L  G   D + + III    KQG V    +L + +   G
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896



 Score =  137 bits (346), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 205/455 (45%), Gaps = 48/455 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +   ++    L   ++ +GV+ +  ++ ++I+ Y + G  ++A  M  ++    
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N ++  L A+ +      +   M + G++P V T  IL+  L K+   D AY
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
               +M + G  PDA +YTT + + C+ G++ +A +                        
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED------------------------ 658

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 ++ +M + G+ P++ TYS++I    D+G    +  +L +M   GC P+ H+F S
Sbjct: 659 ------MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+K +LL  +  +         ++G  P + A S ++         D  V +  +M E+S
Sbjct: 713 LIK-HLLEMKYGK---------QKGSEPELCAMSNMME-------FDTVVELLEKMVEHS 755

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN-GCSPNVVAYTCMVKVLCQNNMFHQA 359
             PN  +Y  LI G  + GNL  A ++++ M  N G SP+ + +  ++   C+    ++A
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             +++ M      P   +    I GL   G  +    +   + Q     +   +  ++DG
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 875

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           + +   V+  +EL   +EK G + +  TY+ ++ G
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
           SV=1
          Length = 619

 Score =  285 bits (730), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 282/535 (52%), Gaps = 6/535 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A+ +F  + +    PT   +N +  A+    ++ ++      M+ +G+E +++T  I++
Sbjct: 53  DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFG 162
              C+  ++  A+ +L      G  PD ++++T+V+  C  G+V EA     R + M+  
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +   + LINGLC + ++ EA  L+  MV+ G  P+ +TY  +++ LC  GN   +L +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M  R    ++  ++ ++      G   +A  L+N M  +G   +VV YS+LI GLC+
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           +G  D+   +  +M   +  P+V T+SALID F K G LL A +++N MI+ G +P+ + 
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++   C+ N  H+A+ + + M  + C P+ VT++  I   C   RVD  M+L  ++ 
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               +PN  TYN L+ G  +  ++  A EL  E+   G+  ++VTY  +L G+C  G + 
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A ++  KM      L    +NIII+  C   KV++A  L   +   G   PD+++Y  +
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVM 531

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           + G+C  G + EA +  +KM  +G  P+  T+N+L+R+     G +  V +++++
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586



 Score =  241 bits (614), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 250/492 (50%), Gaps = 5/492 (1%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M++ G+         +IN Y R      A  +  R  + G +P    ++ +++    E R
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
            S    +   M      P++ T + L+  LC   RV  A  L+  M   G  PD V+Y  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 141 IVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++ +CK G    A +L  +       + V  Y+ +I+ LCK+   ++A  L  EM  +G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I  +V+TYS++I  LC+ G  +    +L +M  R   P++ +F++L+  ++  G+  EA 
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L+N MI  G  P+ + Y++LI G C    + EA  +   M    C P++ TYS LI+ +
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            KA  +    +++  + S G  PN + Y  +V   CQ+   + A  L ++M     PP+ 
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+   + GLC  G ++ A+++ ++M++      I  YN ++ G+   ++V +A+ L   
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G++ ++VTYN ++ G+C+ G + EA  L  KM  +G   D  T+NI+I A+     
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575

Query: 496 VNNAIQLLDRIR 507
           + ++++L++ ++
Sbjct: 576 LISSVELIEEMK 587



 Score =  207 bits (528), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 228/461 (49%), Gaps = 5/461 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F +++N +   G   +A+ +  R+ E   +P +   + +++ L  + R S    +   M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G +P+  TY  +L  LCK+     A  L  +M  +      V Y+ ++ S+CK G  
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261

Query: 152 EEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A     E+ M+   + V  Y++LI GLC + K ++   +L EM+ R I P+V+T+S +
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I      G +  +  +  +M  RG  P+  ++ SL+ G+      HEA+ +++ M+ +G 
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++V YS LI+  C    +D+ + +  ++      PN  TY+ L+ GF ++G L  A +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M+S G  P+VV Y  ++  LC N   ++A  + EKM           +N  I G+C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +VD A  L   +      P++ TYN ++ GL +   + EA  L  ++++ G   +  
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           TYN ++        ++ + +L+ +M + G   D+ T  ++I
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602



 Score =  202 bits (515), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 219/419 (52%), Gaps = 6/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G    E  +  V+N   + G +  AL +F ++ E  +K +V  Y+ ++D+L 
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +  F     +++ M+  G++ +V TY+ L+  LC + + D   K+L EM  +   PD V
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +++ ++    K G++ EA+EL               YN+LI+G CKE+ + EA  +   M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G +P+++TYS +I+S C    V+  + +  ++  +G  PN  ++ +L+ G+   G+ 
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           + A +L+  M+  G  P+VV Y  L+ GLC NG +++A+ +  +M+++     +  Y+ +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G   A  +  A  ++  +   G  P+VV Y  M+  LC+     +A  L  KM  + C
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P+  T+N  I+   G   +  +++L+++MK      + +T   ++D +L   R+ ++F
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID-MLSDRRLDKSF 614



 Score =  182 bits (462), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 213/435 (48%), Gaps = 37/435 (8%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           +S    L NG+  + K+ +A  L   M+     P  I ++ + S++      +  LG   
Sbjct: 36  LSYKERLRNGIV-DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M + G   ++++ T ++  Y    +   A  +  R  + G+ P+ + +STL++G C  G
Sbjct: 95  GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN----- 339
            + EAV++  +M E    P++ T S LI+G    G +  A  + +RM+  G  P+     
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214

Query: 340 ------------------------------VVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
                                         VV Y+ ++  LC++  F  A SL  +M  +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               + VT+++ I GLC  G+ D   K+L +M     +P++ T++ L+D  ++  ++ EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL  E+   GI  + +TYN+++ G C+   + EA Q+   M+ +G + D +T++I+I +
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           YCK  +V++ ++L   I   G   P+ I+Y +L+ G C SG +  A    Q+M++ G+ P
Sbjct: 395 YCKAKRVDDGMRLFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453

Query: 550 NFATWNVLVRSLFSN 564
           +  T+ +L+  L  N
Sbjct: 454 SVVTYGILLDGLCDN 468


>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
           OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
          Length = 632

 Score =  281 bits (719), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 282/549 (51%), Gaps = 14/549 (2%)

Query: 25  GVSCSEGVFISVINSYRRVGL--------AEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           G  C E  F S    YR +           + A+ +F  + +    P++  +N +L A+ 
Sbjct: 35  GSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVA 94

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N+F ++  +   M+  G+  +++TY+I +   C+ +++  A  +L +M   G  PD V
Sbjct: 95  KMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV 154

Query: 137 SYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + +++++  C   ++ +A  L      M +      +  LI+GL   +K  EA  L+ +M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V RG  P+++TY T+++ LC  G+++ +L +L +M       ++  + +++ G       
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +L+  M  +G  P+V  YS+LI  LC+ G   +A  +   M E    PNV T+SAL
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ID F K G L+ A ++++ MI     P++  Y+ ++   C ++   +A  + E M  ++C
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT++T IKG C   RV+  M+L  +M Q   + N  TY  L+ G  +      A  
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++   G+  NI+TYN +L G+C+ G + +A  +   +     + D  T+NI+I   C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K GKV +  +L   +   G  +P++I+Y +++ G C  G  +EA   L+KM  +G  PN 
Sbjct: 515 KAGKVEDGWELFCNLSLKG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573

Query: 552 ATWNVLVRS 560
            T+N L+R+
Sbjct: 574 GTYNTLIRA 582



 Score =  279 bits (714), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 272/524 (51%), Gaps = 7/524 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +QM+  G+S     +   IN + R      AL +  ++ + G +P +   + +L+     
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R S    +   M   G +P+ FT+  L+  L  +N+   A  L+ +M  +GC PD V+Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 139 TTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T+V+ +CK G ++ A  L  +   G     V +YN +I+GLCK   +++A  L  EM +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +GI P+V TYS++IS LC+ G    +  +L  M  R  NPN+ +F++L+  ++  G+  E
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L++ MI+    P++  YS+LI+G C +  +DEA  +   M    C PNV TYS LI 
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF KA  +    +++  M   G   N V YT ++    Q      A  + ++M      P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N +T+N  + GLC  G++  AM + + +++    P+I TYN +++G+ +  +V++ +EL 
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +   G+  N++ YNT++ G CR G   EA  LL KM  +G   ++ T+N +I A  + 
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           G    + +L+  +R  G       S   L+  + + G + ++F+
Sbjct: 587 GDREASAELIKEMRSCGFAGD--ASTIGLVTNMLHDGRLDKSFL 628



 Score =  224 bits (570), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 211/430 (49%), Gaps = 5/430 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  ++ + G +P +  Y  +++ L 
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +   M++  +E +V  YN ++  LCK   +D A  L  EM NKG  PD  
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A  L       +    V  ++ALI+   KE K+ EA  L  EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TYS++I+  C    ++ +  +   M  + C PN+ ++++L+KG+    R 
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E  +L+  M + G + N V Y+TLIHG       D A  V  QM      PN+ TY+ L
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K G L  A  ++  +  +   P++  Y  M++ +C+         L   ++ +  
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN + +NT I G C  G  + A  LL +MK+   LPN  TYN L+   LR    + + E
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594

Query: 432 LVTEIEKCGI 441
           L+ E+  CG 
Sbjct: 595 LIKEMRSCGF 604



 Score =  221 bits (564), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 261/526 (49%), Gaps = 20/526 (3%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           R + L  + L + + ++  G  PTV  + ++  +   E  F+  +  Y  + R+ +   +
Sbjct: 3   RSISLTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDII 62

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
                         +VD A  L  +M      P  V +  ++S++ K+ + E    L  +
Sbjct: 63  --------------KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQ 108

Query: 161 FGS-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
             + G+S     Y+  IN  C+  ++  A  +L +M+  G +P+++T S++++  C    
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  ++ ++ QM   G  P+  +FT+L+ G  L  +  EA  L ++M++ G  P++V Y T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++GLC  G +D A+S+  +ME+     +V  Y+ +IDG  K  ++  A  ++  M + G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+V  Y+ ++  LC    +  A  L+  M      PN VTF+  I      G++  A 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           KL D+M +    P+I TY+ L++G    +R+ EA  +   +       N+VTY+T++ G 
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+A  V E  +L  +M   G   + +T+  +I+ + +    +NA  +  ++   G  +P+
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG-VHPN 467

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I++Y  LL G+C +G + +A +  + +    + P+  T+N+++  +
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513



 Score =  193 bits (491), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 206/397 (51%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K +K E    L  +M   GI  ++ TYS  I+  C    +  +L +L +M 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY    R  +A  L ++M+  G+ P+   ++TLIHGL  +    
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  QM +  C P++ TY  +++G  K G++  A  +  +M       +VV Y  ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L  +M  +   P+  T+++ I  LC  GR   A +LL  M + +  
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T++ L+D  ++  ++ EA +L  E+ K  I  +I TY+++++G C    + EA  +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    + +T++ +I  +CK  +V   ++L   +   G    + ++YT+L+ G  
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYTTLIHGFF 444

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +     A +  ++M++ G+ PN  T+N+L+  L  N
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481



 Score =  167 bits (422), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 203/403 (50%), Gaps = 2/403 (0%)

Query: 161 FGSGVSVYNALI-NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           F S    Y  ++ N L    K+++A  L  +MV     P+++ ++ ++S++  +   E  
Sbjct: 43  FASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV 102

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           + +  QM   G + ++++++  +  +    +   A  +  +M++ G+ P++V  S+L++G
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG 162

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C +  + +AV++  QM E    P+  T++ LI G         A  + ++M+  GC P+
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           +V Y  +V  LC+      A SL++KM       + V +NT I GLC    +D A+ L  
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFT 282

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M      P++ TY+ L+  L    R  +A  L++++ +  I  N+VT++ ++    + G
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +VEA +L  +M+      D  T++ +I  +C   +++ A  + + +    +  P++++Y
Sbjct: 343 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTY 401

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++L+ G C +  ++E     ++M   G+  N  T+  L+   F
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444



 Score =  160 bits (406), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 177/340 (52%), Gaps = 5/340 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M  +G+      + S+I+     G    A ++   + E  
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++DA + E +      +Y  M +  ++P++FTY+ L+   C ++R+D A 
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
            +   M +K C P+ V+Y+T++   CK  +VEE     RE++ R   G +V Y  LI+G 
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +    + A  +  +MV  G+ PN++TY+ ++  LC  G +  ++ +   +      P+I
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  +++G    G+  +  +L+  +  +G  PNV+AY+T+I G C  GS +EA S+  +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           M+E+   PN  TY+ LI    + G+   ++++   M S G
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603



 Score =  157 bits (396), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 181/371 (48%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ +ID    LL++M+   +     ++ ++I+   +    + AL +F  +   G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++  L    R+S  + + S+M    + PNV T++ L+ A  K  ++  A 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  EM  +   PD  +Y+++++  C   +++EA+ +     S      V  Y+ LI G 
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++EE   L  EM  RG+  N +TY+T+I       + + +  +  QM   G +PNI
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  LL G    G+  +A  ++  + R    P++  Y+ +I G+C  G +++   +   
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      PNV  Y+ +I GF + G+   A  +  +M  +G  PN   Y  +++   ++  
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588

Query: 356 FHQAHSLIEKM 366
              +  LI++M
Sbjct: 589 REASAELIKEM 599



 Score = 90.5 bits (223), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 6/209 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M   G+  +   + ++I+ + +    + A  +F ++   G+ P +  YN +LD L 
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + +    ++  ++R  MEP+++TYNI+++ +CK  +V+  ++L   +  KG +P+ +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++S  C+ G  EEA  L  +            YN LI    ++   E +  L+ EM
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSL 220
              G   +  T   + + L D G ++ S 
Sbjct: 600 RSCGFAGDASTIGLVTNMLHD-GRLDKSF 627


>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
           OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
          Length = 747

 Score =  280 bits (716), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/540 (30%), Positives = 274/540 (50%), Gaps = 60/540 (11%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR-FSMINPI 87
           +  VF  V+ SY R+ L ++AL + +  +  G  P V  YN +LDA +   R  S    +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           +  M    + PNVFTYNIL++  C    +D A  L  +M  KGC P+ V+Y T++   CK
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 148 LGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR-------- 194
           L ++++     R +A++     +  YN +INGLC+E +++E  ++L EM  R        
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 195 ---------------------------GIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
                                      G+ P+VITY+++I S+C  GN+  ++  L QM 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           VRG  PN  ++T+L+ G+   G  +EA  +   M   GF P+VV Y+ LI+G C  G M+
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A++V   M+E    P+V +YS ++ GF ++ ++  A ++   M+  G  P+ + Y+ ++
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           +  C+     +A  L E+M     PP+  T+   I   C  G ++ A++L ++M +   L
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 408 PNITTYNELLDGLLRVNRVKEAFELV----------------TEIEKCG-IQLNIVTYNT 450
           P++ TY+ L++GL + +R +EA  L+                T IE C  I+   V   +
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV--S 610

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G C  GM+ EA Q+   ML +  K D   +NI+I+ +C+ G +  A  L   +   G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670



 Score =  219 bits (558), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 257/528 (48%), Gaps = 21/528 (3%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L  +M+ +G   +   + ++I+ Y ++   +   K+   +   GL+P +  YN 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++ L  E R   ++ + + M R G   +  TYN L+K  CK      A  +  EM   G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNALINGLCKEHKIEEAF 185
             P  ++YT+++ S+CK G +  A E    MR          Y  L++G  ++  + EA+
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L EM D G  P+V+TY+ +I+  C  G +E ++ +L  M  +G +P++ S++++L G+
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA  +   M+ +G  P+ + YS+LI G C      EA  +  +M     PP+ 
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ALI+ +   G+L  A Q+ N M+  G  P+VV Y+ ++  L + +   +A  L+ K
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580

Query: 366 MAFENCPPNTVTFNT---------------FIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           + +E   P+ VT++T                IKG C  G +  A ++ + M      P+ 
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           T YN ++ G  R   +++A+ L  E+ K G  L+ VT   ++  + + G V E   ++  
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH 700

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           +L      +A    +++    ++G ++  + +L  +   G + P+ IS
Sbjct: 701 VLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG-FLPNGIS 747



 Score = 95.1 bits (235), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 2/194 (1%)

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR- 425
            ++ C   +  F+  +K       +D A+ ++   + +  +P + +YN +LD  +R  R 
Sbjct: 126 TYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN 185

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +  A  +  E+ +  +  N+ TYN ++ G C AG +  A  L  KM  +G   + +T+N 
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  YCK  K+++  +LL  +   G   P++ISY  ++ G+C  G M+E    L +M   
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKG-LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304

Query: 546 GICPNFATWNVLVR 559
           G   +  T+N L++
Sbjct: 305 GYSLDEVTYNTLIK 318


>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
           mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
           SV=1
          Length = 630

 Score =  279 bits (714), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 273/512 (53%), Gaps = 5/512 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L +QM+  G+S +   +  +IN + R      AL +  ++ + G
Sbjct: 87  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +   N +L+     NR S    +   M   G +P+ FT+N L+  L ++NR   A 
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            L+  M  KGC PD V+Y  +V+ +CK G ++ A  L  +   G     V +YN +I+ L
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    + +A  L  EM ++GI PNV+TY+++I  LC+ G    +  +L  M  R  NPN+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F++L+  ++  G+  EA  L++ MI+    P++  YS+LI+G C +  +DEA  +   
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PNV TY+ LI GF KA  +    +++  M   G   N V YT ++    Q   
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +   P+ +T++  + GLC  G+V+ A+ + + +++ +  P+I TYN 
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V++ ++L   +   G++ N+VTY T++ G CR G+  EA  L  +M  EG
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
              D+ T+N +I A+ + G    + +L+  +R
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598



 Score =  273 bits (697), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 278/540 (51%), Gaps = 13/540 (2%)

Query: 33  FISVINSYRRVGL-------AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           F  V   YR++ +        + A+ +F  + +    P++  ++ +L A+   N+F ++ 
Sbjct: 42  FSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVI 101

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            +   M+  G+  N++TY+IL+   C+ +++  A  +L +M   G  PD V+  ++++  
Sbjct: 102 SLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF 161

Query: 146 CKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C   ++ +A  L      M +      +N LI+GL + ++  EA  L+  MV +G  P++
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY  +++ LC  G+++ +L +L +M      P +  + +++         ++A +L+  
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  PNVV Y++LI  LC+ G   +A  +   M E    PNV T+SALID F K G 
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L+ A ++++ MI     P++  Y+ ++   C ++   +A  + E M  ++C PN VT+NT
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            IKG C   RVD  M+L  +M Q   + N  TY  L+ G  +      A  +  ++   G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +  +I+TY+ +L G+C  G V  A  +   +     + D  T+NI+I   CK GKV +  
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            L   +   G   P++++YT+++ G C  G  +EA    ++M  EG  P+  T+N L+R+
Sbjct: 522 DLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580



 Score =  224 bits (572), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 235/452 (51%), Gaps = 6/452 (1%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYN 169
           ++D A  L  +M      P  V ++ ++S+I K+ + +    L  +  + G+S     Y+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            LIN  C+  ++  A  +L +M+  G +P+++T +++++  C    +  ++ ++GQM   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  P+  +F +L+ G     R  EA  L +RM+ +G  P++V Y  +++GLC  G +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           +S+  +ME+    P V  Y+ +ID      N+  A  ++  M + G  PNVV Y  +++ 
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC    +  A  L+  M      PN VTF+  I      G++  A KL D+M +    P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TY+ L++G    +R+ EA  +   +       N+VTYNT++ G C+A  V E  +L  
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M   G   + +T+  +I+ + +  + +NA  +  ++   G   PDI++Y+ LL G+CN+
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSILLDGLCNN 479

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G ++ A +  + +    + P+  T+N+++  +
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511



 Score =  211 bits (536), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 206/428 (48%), Gaps = 5/428 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+   R   A +A+ +  R+   G +P +  Y  +++ L 
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +   M++  +EP V  YN ++ ALC    V+ A  L  EM NKG  P+ V
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +C  G+  +A  L       +    V  ++ALI+   KE K+ EA  L  EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TYS++I+  C    ++ +  +   M  + C PN+ ++ +L+KG+    R 
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E  +L+  M + G + N V Y+TLIHG       D A  V  QM  +   P++ TYS L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG    G +  A  ++  +  +   P++  Y  M++ +C+         L   ++ +  
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+ T + G C  G  + A  L  +MK+   LP+  TYN L+   LR      + E
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592

Query: 432 LVTEIEKC 439
           L+ E+  C
Sbjct: 593 LIREMRSC 600



 Score =  202 bits (513), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 218/419 (52%), Gaps = 6/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M V+G       +  V+N   + G  + AL +  ++ +  ++P V IYN I+DAL 
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                +    +++ M   G+ PNV TYN L++ LC   R   A +LL +M  +   P+ V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +++ ++ +  K G++ EA +L            +  Y++LING C   +++EA  +   M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +   PNV+TY+T+I   C    V+  + +  +M  RG   N  ++T+L+ G+      
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ +M+ +G LP+++ YS L+ GLC+NG ++ A+ V   ++ +   P++ TY+ +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  KAG +     ++  +   G  PNVV YT M+   C+  +  +A +L  +M  E  
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P++ T+NT I+     G    + +L+ +M+    + + +T   L+  +L   R+ ++F
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  201 bits (511), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 211/397 (53%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           ++ L++ + K +K +    L  +M + GI  N+ TYS +I+  C    +  +L +L +M 
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I +  SLL G+  G R  +A  L  +M+  G+ P+   ++TLIHGL  +    
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M    C P++ TY  +++G  K G++  A  +  +M      P VV Y  ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC     + A +L  +M  +   PN VT+N+ I+ LC  GR   A +LL  M + +  
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T++ L+D  ++  ++ EA +L  E+ K  I  +I TY+++++G C    + EA  +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    + +T+N +I  +CK  +V+  ++L   +   G    + ++YT+L+ G  
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG-NTVTYTTLIHGFF 442

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +     A I  ++M+++G+ P+  T+++L+  L +N
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479



 Score =  170 bits (431), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 194/383 (50%), Gaps = 1/383 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K+++A  L  +MV     P+++ +S ++S++  +   +  + +  QM   G + N+++++
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+  +    +   A  +  +M++ G+ P++V  ++L++G C    + +AVS+  QM E 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P+  T++ LI G  +      A  + +RM+  GC P++V Y  +V  LC+      A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL++KM      P  V +NT I  LC    V+ A+ L  +M      PN+ TYN L+  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L    R  +A  L++++ +  I  N+VT++ ++    + G +VEA +L  +M+      D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T++ +I  +C   +++ A  + + +    +  P++++Y +L+ G C +  + E     
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419

Query: 540 QKMLNEGICPNFATWNVLVRSLF 562
           ++M   G+  N  T+  L+   F
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFF 442



 Score = 59.7 bits (143), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 87/189 (46%), Gaps = 4/189 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    +  E D  Q + +QM  +GV      +  +++     G  E AL +F  ++   
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  YN +++ +    +      ++ ++   G++PNV TY  ++   C+    + A 
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA----LINGLC 176
            L  EM  +G  PD+ +Y T++ +  + G    + EL     S   V +A    L+  + 
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616

Query: 177 KEHKIEEAF 185
            + +++++F
Sbjct: 617 HDGRLDKSF 625


>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
           SV=2
          Length = 629

 Score =  278 bits (712), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 275/519 (52%), Gaps = 6/519 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  + +    P++  +N +L A+   N+F ++  +   M+   +  ++++YNIL
Sbjct: 62  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           +   C+ +++  A  +L +M   G  PD V+ +++++  C   ++ EA  L      M +
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 +N LI+GL   +K  EA  L+  MV RG  P++ TY T+++ LC  G+++ +L 
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M       ++  +T+++         ++A +L+  M  +G  PNVV Y++LI  LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           + G   +A  +   M E    PNV T+SALID F K G L+ A ++++ MI     P++ 
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++   C ++   +A  + E M  ++C PN VT+NT IKG C   RV+  M+L  +M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            Q   + N  TYN L+ GL +      A ++  ++   G+  +I+TY+ +L G+C+ G +
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  +   +     + D  T+NI+I   CK GKV +   L   +   G   P++I YT+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTT 540

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++ G C  G  +EA    ++M  +G  PN  T+N L+R+
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579



 Score =  261 bits (668), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 266/507 (52%), Gaps = 7/507 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN + R      AL +  ++ + G +P +   + +L+      R S    +   M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +PN  T+N L+  L  +N+   A  L+  M  +GC PD  +Y T+V+ +CK G ++ A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 156 ELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L  +   G     V +Y  +I+ LC    + +A  L  EM ++GI PNV+TY+++I  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C+ G    +  +L  M  R  NPN+ +F++L+  ++  G+  EA  L++ MI+    P++
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             YS+LI+G C +  +DEA  +   M    C PNV TY+ LI GF KA  +    +++  
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G   N V Y  +++ L Q      A  + +KM  +  PP+ +T++  + GLC  G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+ + + +++ +  P+I TYN +++G+ +  +V++ ++L   +   G++ N++ Y T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G CR G+  EA  L  +M  +GT  ++ T+N +I A  + G    + +L+  +R  G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFI 537
                  S  S++  + + G ++++++
Sbjct: 601 FVGD--ASTISMVINMLHDGRLEKSYL 625



 Score =  215 bits (548), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 208/429 (48%), Gaps = 5/429 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM V     +   F ++I+       A +A+ +  R+   G +P +  Y  +++ L 
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +   M++  +E +V  Y  ++ ALC    V+ A  L  EM NKG  P+ V
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +C  G+  +A  L       +    V  ++ALI+   KE K+ EA  L  EM
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TYS++I+  C    ++ +  +   M  + C PN+ ++ +L+KG+    R 
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E  +L+  M + G + N V Y+TLI GL   G  D A  +  +M  +  PP++ TYS L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K G L  A  ++  +  +   P++  Y  M++ +C+         L   ++ +  
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN + + T I G C  G  + A  L  +MK+   LPN  TYN L+   LR      + E
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591

Query: 432 LVTEIEKCG 440
           L+ E+  CG
Sbjct: 592 LIKEMRSCG 600



 Score =  197 bits (501), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 148 LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            G++ ++R L       +  +N L++ + K +K +    L   M +  I  ++ +Y+ +I
Sbjct: 68  FGEMVQSRPLP-----SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  C    +  +L +LG+M   G  P+I + +SLL GY  G R  EA  L ++M    + 
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN V ++TLIHGL  +    EAV++  +M    C P++ TY  +++G  K G++  A  +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
             +M       +VV YT ++  LC     + A +L  +M  +   PN VT+N+ I+ LC 
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GR   A +LL  M + +  PN+ T++ L+D  ++  ++ EA +L  E+ K  I  +I T
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y+++++G C    + EA  +   M+ +    + +T+N +I  +CK  +V   ++L   + 
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             G    + ++Y +L+ G+  +G    A    +KM+++G+ P+  T+++L+  L
Sbjct: 423 QRGLVG-NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475



 Score =  163 bits (412), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 193/383 (50%), Gaps = 1/383 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K+++A  L  EMV     P+++ ++ ++S++  +   +  + +  +M     + +++S+ 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+  +    +   A  +  +M++ G+ P++V  S+L++G C    + EAV++  QM   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PN  T++ LI G         A  + +RM++ GC P++  Y  +V  LC+      A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL++KM       + V + T I  LC    V+ A+ L  +M      PN+ TYN L+  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L    R  +A  L++++ +  I  N+VT++ ++    + G +VEA +L  +M+      D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T++ +I  +C   +++ A  + + +    +  P++++Y +L+ G C +  ++E     
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 540 QKMLNEGICPNFATWNVLVRSLF 562
           ++M   G+  N  T+N L++ LF
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLF 441



 Score =  158 bits (400), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 5/367 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L ++ +ID    LL++M+   +     ++ ++I++         AL +F  +   G++P 
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  YN ++  L    R+S  + + S+M    + PNV T++ L+ A  K  ++  A KL  
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
           EM  +   PD  +Y+++++  C   +++EA+ +     S      V  YN LI G CK  
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++EE   L  EM  RG+  N +TY+T+I  L   G+ + +  I  +M   G  P+I +++
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            LL G    G+  +A  ++  + +    P++  Y+ +I G+C  G +++   +   +   
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PNV  Y+ +I GF + G    A  ++  M  +G  PN   Y  +++   ++     +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589

Query: 360 HSLIEKM 366
             LI++M
Sbjct: 590 AELIKEM 596



 Score =  152 bits (383), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 171/354 (48%), Gaps = 36/354 (10%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L +  LL  +  +A DL+  M++   LP++V ++ L+  +      D  +S+  +M+   
Sbjct: 51  LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ +Y+ LI+ F +   L  A  +  +M+  G  P++V  + ++   C      +A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170

Query: 361 SLIEKMAFENCPPNTVTFNTFIK-----------------------------------GL 385
           +L+++M      PNTVTFNT I                                    GL
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G +D A+ LL +M++ +   ++  Y  ++D L     V +A  L TE++  GI+ N+
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYN+++  +C  G   +A +LL  M+      + +TF+ +I A+ K+GK+  A +L D 
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           +      +PDI +Y+SL+ G C    + EA    + M+++   PN  T+N L++
Sbjct: 351 MIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403



 Score = 60.1 bits (144), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 36/190 (18%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++D A+ L  +M Q   LP+I  +N+LL  + ++N+    F+LV  + +    L I    
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK----FDLVISLGERMQNLRI---- 111

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
                                        D  ++NI+I  +C++ ++  A+ +L ++   
Sbjct: 112 ---------------------------SYDLYSYNILINCFCRRSQLPLALAVLGKMMKL 144

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + PDI++ +SLL G C+   + EA   + +M      PN  T+N L+  LF +     
Sbjct: 145 G-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203

Query: 570 PVYILDDIMA 579
            V ++D ++A
Sbjct: 204 AVALIDRMVA 213


>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
           mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
           SV=1
          Length = 614

 Score =  277 bits (708), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 281/524 (53%), Gaps = 7/524 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++M++ GVS +   +  +IN   R      AL +  ++ + G  P++   N +L+     
Sbjct: 89  EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           NR S    +   M   G +P+  T+  L+  L ++N+   A  L+  M  KGC PD V+Y
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208

Query: 139 TTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVD 193
             +++ +CK G+ + A  L  +   G     V +Y+ +I+ LCK   +++A  L  EM +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +GI P+V TYS++IS LC+ G    +  +L  M  R  NPN+ +F SL+  +   G+  E
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L++ MI+    PN+V Y++LI+G C +  +DEA  +   M    C P+V TY+ LI+
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF KA  ++   +++  M   G   N V YT ++    Q +    A  + ++M  +   P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N +T+NT + GLC  G+++ AM + + +++ +  P+I TYN + +G+ +  +V++ ++L 
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +   G++ +++ YNT++ G C+ G+  EA+ L  KM  +G   D+ T+N +I A+ + 
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           G    + +L+  +R    +  D  +Y  L+  + + G + + F+
Sbjct: 569 GDKAASAELIKEMR-SCRFAGDASTY-GLVTDMLHDGRLDKGFL 610



 Score =  247 bits (631), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 253/508 (49%), Gaps = 6/508 (1%)

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G+   +  YN +++ L   ++ S    I   M + G  P++ T N LL   C  NR+  
Sbjct: 94  LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALIN 173
           A  L+ +M   G  PD V++TT+V  + +  +  EA  L  R         +  Y A+IN
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  + + A  LL +M    I+ +V+ YST+I SLC   +V+ +L +  +M  +G  P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ +++SL+      GR  +AS L + M+     PNVV +++LI      G + EA  + 
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M + S  PN+ TY++LI+GF     L  A QI+  M+S  C P+VV Y  ++   C+ 
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                   L   M+      NTVT+ T I G       D A  +  QM      PNI TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N LLDGL +  ++++A  +   ++K  ++ +I TYN +  G+C+AG V + + L   + +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G K D I +N +I  +CK+G    A  L  +++  G   PD  +Y +L+      G   
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKA 572

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +   +++M +     + +T+ ++   L
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score =  215 bits (548), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 213/440 (48%), Gaps = 5/440 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++++   +   A +A+ +  R+   G +P +  Y  +++ L 
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M++  +E +V  Y+ ++ +LCK   VD A  L  EM NKG  PD  
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A  L       +    V  +N+LI+   KE K+ EA  L  EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDPN++TY+++I+  C    ++ +  I   M  + C P++ ++ +L+ G+    + 
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +  +L+  M R G + N V Y+TLIHG       D A  V  QM  +   PN+ TY+ L
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K G L  A  ++  +  +   P++  Y  M + +C+         L   ++ +  
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ + +NT I G C  G  + A  L  +MK+   LP+  TYN L+   LR      + E
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576

Query: 432 LVTEIEKCGIQLNIVTYNTI 451
           L+ E+  C    +  TY  +
Sbjct: 577 LIKEMRSCRFAGDASTYGLV 596



 Score =  211 bits (536), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 226/451 (50%), Gaps = 33/451 (7%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALING 174
           ++D A  L  EM      P  V ++ ++S+I K+ + +    L + FG  + +       
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD----LVISFGEKMEIL------ 94

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
                               G+  N+ TY+ +I+ LC    +  +L ILG+M   G  P+
Sbjct: 95  --------------------GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPS 134

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +  SLL G+  G R  EA  L ++M+  G+ P+ V ++TL+HGL  +    EAV++  
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M    C P++ TY A+I+G  K G    A  + N+M       +VV Y+ ++  LC+  
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A +L  +M  +   P+  T+++ I  LC  GR   A +LL  M + +  PN+ T+N
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+D   +  ++ EA +L  E+ +  I  NIVTYN++++G C    + EA Q+   M+ +
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
               D +T+N +I  +CK  KV + ++L  D  R G   N   ++YT+L+ G   +    
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN--TVTYTTLIHGFFQASDCD 432

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            A +  ++M+++G+ PN  T+N L+  L  N
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463



 Score =  196 bits (497), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 217/419 (51%), Gaps = 6/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+++M V+G       + +VIN   + G  + AL +  ++ +  ++  V IY+ ++D+L 
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +++ M   G+ P+VFTY+ L+  LC   R   A +LL +M  +   P+ V
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ +++ +  K G++ EA +L            +  YN+LING C   +++EA  +   M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +   P+V+TY+T+I+  C    V   + +   M  RG   N  ++T+L+ G+      
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ +M+ +G  PN++ Y+TL+ GLC NG +++A+ V   ++++   P++ TY+ +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            +G  KAG +     ++  +   G  P+V+AY  M+   C+  +  +A++L  KM  +  
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P++ T+NT I+     G    + +L+ +M+      + +TY  + D +L   R+ + F
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRLDKGF 609



 Score =  159 bits (402), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 180/355 (50%), Gaps = 5/355 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M  +G+      + S+I+     G    A ++   + E  
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++DA   E +      ++  M +  ++PN+ TYN L+   C ++R+D A 
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQV----EEARELAMRFGSGVSV-YNALINGL 175
           ++   M +K C PD V+Y T+++  CK  +V    E  R+++ R   G +V Y  LI+G 
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +    + A  +  +MV  G+ PN++TY+T++  LC  G +E ++ +   +      P+I
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  + +G    G+  +  DL+  +  +G  P+V+AY+T+I G C  G  +EA ++  +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           M+E+   P+  TY+ LI    + G+   ++++   M S   + +   Y  +  +L
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score =  153 bits (386), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 181/371 (48%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ E D    LL +M+   +     ++ +VI+S  +    + AL +F  +   G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++  L    R+S  + + S+M    + PNV T+N L+ A  K  ++  A 
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  EM  +   P+ V+Y ++++  C   +++EA+++     S      V  YN LING 
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+ +   L  +M  RG+  N +TY+T+I       + + +  +  QM   G +PNI
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +LL G    G+  +A  ++  + +    P++  Y+ +  G+C  G +++   +   
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P+V  Y+ +I GF K G    A  ++ +M  +G  P+   Y  +++   ++  
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570

Query: 356 FHQAHSLIEKM 366
              +  LI++M
Sbjct: 571 KAASAELIKEM 581



 Score =  147 bits (372), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 161/318 (50%), Gaps = 1/318 (0%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L +  LL  +  EA DL+  M++    P++V +S L+  +      D  +S   +ME   
Sbjct: 36  LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              N+ TY+ +I+   +   L  A  I  +M+  G  P++V    ++   C  N   +A 
Sbjct: 96  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L+++M      P+TVTF T + GL    +   A+ L+++M    C P++ TY  +++GL
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +      A  L+ ++EK  I+ ++V Y+T++  +C+   V +A  L  +M  +G + D 
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T++ +I   C  G+ ++A +LL  +    + NP+++++ SL+      G + EA     
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334

Query: 541 KMLNEGICPNFATWNVLV 558
           +M+   I PN  T+N L+
Sbjct: 335 EMIQRSIDPNIVTYNSLI 352


>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
           SV=2
          Length = 630

 Score =  276 bits (707), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 285/542 (52%), Gaps = 7/542 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L +QM+  G+  +   +  +IN + R      AL +  ++ + G
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +   + +L+      R S    +   M   G +PN  T+N L+  L  +N+   A 
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  KGC PD V+Y  +V+ +CK G  + A  L       +   GV +YN +I+GL
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++A  L  EM  +GI PNV+TYS++IS LC+ G    +  +L  M  R  NP++
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F++L+  ++  G+  EA  L++ M++    P++V YS+LI+G C +  +DEA  +   
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P+V TY+ LI GF K   +    +++  M   G   N V Y  +++ L Q   
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +  PPN +T+NT + GLC  G+++ AM + + +++ +  P I TYN 
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V++ ++L   +   G++ ++V YNT++ G CR G   EA  L  +M  +G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           T  ++  +N +I A  + G    + +L+  +R  G +  D  S   L+  + + G + ++
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGD-ASTIGLVTNMLHDGRLDKS 624

Query: 536 FI 537
           F+
Sbjct: 625 FL 626



 Score =  274 bits (700), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 280/531 (52%), Gaps = 16/531 (3%)

Query: 42  RVGLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           R GL+E     A+ +F  + +    P++  ++ +L A+   N+F ++  +   M+  G+ 
Sbjct: 54  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            N +TY+IL+   C+ +++  A  +L +M   G  P+ V+ +++++  C   ++ EA  L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 158 AMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             +     +      +N LI+GL   +K  EA  L+  MV +G  P+++TY  +++ LC 
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G+ + +  +L +M      P +  + +++ G        +A +L+  M  +G  PNVV 
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS+LI  LC+ G   +A  +   M E    P+V T+SALID F K G L+ A ++++ M+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                P++V Y+ ++   C ++   +A  + E M  ++C P+ VT+NT IKG C   RV+
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             M++  +M Q   + N  TYN L+ GL +      A E+  E+   G+  NI+TYNT+L
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 453 HGVCRAGMVVEA---FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            G+C+ G + +A   F+ L +  +E T     T+NI+I   CK GKV +   L   +   
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           G   PD+++Y +++ G C  G  +EA    ++M  +G  PN   +N L+R+
Sbjct: 531 G-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580



 Score =  224 bits (571), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 256/512 (50%), Gaps = 14/512 (2%)

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN---- 114
           F +  T K + H   +L+     + ++P +S   R        +Y+   K L +N     
Sbjct: 5   FAIASTAKRFVH--RSLVVRGNAATVSPSFSFFWRRAFSGKT-SYDYREK-LSRNGLSEL 60

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYN 169
           ++D A  L  EM      P  + ++ ++S+I K+ + +    L  +  + G+      Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            LIN  C+  ++  A  +L +M+  G +PN++T S++++  C    +  ++ ++ QMFV 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN  +F +L+ G  L  +  EA  L +RM+ +G  P++V Y  +++GLC  G  D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
            ++  +ME+    P V  Y+ +IDG  K  ++  A  ++  M + G  PNVV Y+ ++  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC    +  A  L+  M      P+  TF+  I      G++  A KL D+M +    P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TY+ L++G    +R+ EA ++   +       ++VTYNT++ G C+   V E  ++  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M   G   + +T+NI+I    + G  + A ++   +   G   P+I++Y +LL G+C +
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKN 479

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G +++A +  + +    + P   T+N+++  +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511



 Score =  202 bits (515), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 210/397 (52%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           ++ L++ + K +K +    L  +M + GI  N  TYS +I+  C    +  +L +LG+M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  PNI + +SLL GY    R  EA  L ++M   G+ PN V ++TLIHGL  +    
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA+++  +M    C P++ TY  +++G  K G+   A  + N+M      P V+ Y  ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ T++ L+D  ++  ++ EA +L  E+ K  I  +IVTY+++++G C    + EA Q+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D +T+N +I  +CK  +V   +++   +   G    + ++Y  L+ G+ 
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLF 442

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +G    A    ++M+++G+ PN  T+N L+  L  N
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479



 Score =  177 bits (449), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 201/390 (51%), Gaps = 2/390 (0%)

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NGL  E K+++A  L  EMV     P++I +S ++S++  +   +  + +  QM   G  
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N ++++ L+  +    +   A  +  +M++ G+ PN+V  S+L++G C +  + EAV++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             QM      PN  T++ LI G         A  + +RM++ GC P++V Y  +V  LC+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A +L+ KM      P  + +NT I GLC    +D A+ L  +M+     PN+ T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+  L    R  +A  L++++ +  I  ++ T++ ++    + G +VEA +L  +M+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
                   +T++ +I  +C   +++ A Q+ + +     + PD+++Y +L+ G C    +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRV 412

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +E     ++M   G+  N  T+N+L++ LF
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLF 442


>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
           OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
          Length = 660

 Score =  276 bits (706), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 176/591 (29%), Positives = 296/591 (50%), Gaps = 62/591 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREF 59
           MIE      + D V+ LL ++++E     E  FI V  +Y +  L ++A+ +F+R + EF
Sbjct: 83  MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIY-----SNMKRDGMEPNVFTYNILLKALCKNN 114
             K +VK +N +L+ ++ E  +      Y     SNM  + + PN  ++N+++KALCK  
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNGLSFNLVIKALCKLR 201

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALING 174
            VD A ++   M  + C PD  +Y T                              L++G
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCT------------------------------LMDG 231

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCKE +I+EA  LL EM   G  P+ + Y+ +I  LC  G++     ++  MF++GC PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++ +L+ G  L G+  +A  L  RM+    +PN V Y TLI+GL       +AV +  
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            MEE     N   YS LI G  K G    A  +W +M   GC PN+V Y+ +V  LC+  
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             ++A  ++ +M    C PN  T+++ +KG    G  + A+++  +M +  C  N   Y+
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DGL  V RVKEA  + +++   GI+ + V Y++I+ G+C  G +  A +L  +ML +
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531

Query: 475 ---GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI----- 526
               ++ D +T+NI++   C Q  ++ A+ LL+ +   G  +PD+I+  + L  +     
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG-CDPDVITCNTFLNTLSEKSN 590

Query: 527 -CNSGG--MQEAFIYLQK-------------MLNEGICPNFATWNVLVRSL 561
            C+ G   ++E  + L K             ML + + P  +TW ++VR +
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREI 641



 Score =  177 bits (448), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 68/415 (16%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+ +   ++  G  P+  IYN ++D L  +   + +  +  NM   G  PN  TYN L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           +  LC   ++D A  LL  M +  C P+ V+Y T+++ + K  +  +A  L        +
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                +Y+ LI+GL KE K EEA  L  +M ++G  PN++ YS ++  LC  G    +  
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGY----------------------------------LL 247
           IL +M   GC PN ++++SL+KG+                                  L 
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 248 G-GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM---EENSCPP 303
           G GR  EA  +W++M+  G  P+ VAYS++I GLC  GSMD A+ + ++M   EE    P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC------------------ 345
           +V TY+ L+DG     ++  A  + N M+  GC P+V+  TC                  
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVI--TCNTFLNTLSEKSNSCDKGR 596

Query: 346 -----MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
                +V  L +      A +++E M  +   P T T+   ++ +C   +++ A+
Sbjct: 597 SFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651



 Score =  135 bits (340), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 177/366 (48%), Gaps = 6/366 (1%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           T S++I S  + G+ ++   +L ++ +        SF  + + Y       +A DL++RM
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138

Query: 262 IREGFLP-NVVAYSTLIHGLCSNGSMDEAVSV-SYQMEEN---SCPPNVTTYSALIDGFA 316
           + E     +V +++++++ + + G     +    Y +  N   +  PN  +++ +I    
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K   +  A +++  M    C P+   Y  ++  LC+     +A  L+++M  E C P+ V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +N  I GLC  G +    KL+D M    C+PN  TYN L+ GL    ++ +A  L+  +
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
                  N VTY T+++G+ +     +A +LL  M   G  L+   ++++I    K+GK 
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A+ L  ++   G   P+I+ Y+ L+ G+C  G   EA   L +M+  G  PN  T++ 
Sbjct: 379 EEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437

Query: 557 LVRSLF 562
           L++  F
Sbjct: 438 LMKGFF 443


>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
           PE=2 SV=1
          Length = 791

 Score =  274 bits (700), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 171/543 (31%), Positives = 270/543 (49%), Gaps = 46/543 (8%)

Query: 28  CSEGVFISVINSYRRVGLAEQAL----KMFYRIREFGLKPTVKIYNHILDALLAENRFS- 82
           C+ G+ I       R+ L   AL    K  +R+      P       +L  L A+ R S 
Sbjct: 88  CTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP-------LLKGLCADKRTSD 140

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK---GCAPDAVSYT 139
            ++ +   M   G  PNVF+YNILLK LC  NR   A +LL  M +    G  PD VSYT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 140 TIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           T+                              ING  KE   ++A+    EM+DRGI P+
Sbjct: 201 TV------------------------------INGFFKEGDSDKAYSTYHEMLDRGILPD 230

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY++II++LC    ++ ++ +L  M   G  P+  ++ S+L GY   G+  EA     
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           +M  +G  P+VV YS L+  LC NG   EA  +   M +    P +TTY  L+ G+A  G
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L+    + + M+ NG  P+   ++ ++    +     QA  +  KM  +   PN VT+ 
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I  LC  GRV+ AM   +QM      P    YN L+ GL   N+ + A EL+ E+   
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI LN + +N+I+   C+ G V+E+ +L   M+  G K + IT+N +I  YC  GK++ A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           ++LL  +   G   P+ ++Y++L+ G C    M++A +  ++M + G+ P+  T+N++++
Sbjct: 531 MKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589

Query: 560 SLF 562
            LF
Sbjct: 590 GLF 592



 Score =  249 bits (637), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 261/535 (48%), Gaps = 6/535 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + +VIN + + G +++A   ++ + + G+ P V  YN I+ AL           + + M 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           ++G+ P+  TYN +L   C + +   A   L +M + G  PD V+Y+ ++  +CK G+  
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 153 EAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EAR++            ++ Y  L+ G   +  + E   LL  MV  GI P+   +S +I
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +    G V+ ++ +  +M  +G NPN  ++ +++      GR  +A   + +MI EG  
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P  + Y++LIHGLC+    + A  +  +M +     N   ++++ID   K G ++ + ++
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M+  G  PNV+ Y  ++   C      +A  L+  M      PNTVT++T I G C 
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             R++ A+ L  +M+     P+I TYN +L GL +  R   A EL   I + G Q+ + T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN ILHG+C+  +  +A Q+   + +   KL+A TFNI+I A  K G+ + A  L     
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             G   P+  +Y  +   I   G ++E       M + G   +    N +VR L 
Sbjct: 679 SNG-LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732



 Score =  244 bits (622), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 255/516 (49%), Gaps = 9/516 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD---GMEPNVFTYNILLKALC 111
           R+ E G  P V  YN +L  L  ENR      +   M  D   G  P+V +Y  ++    
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS---- 166
           K    D AY    EM ++G  PD V+Y +I++++CK   +++A E L     +GV     
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN++++G C   + +EA   L +M   G++P+V+TYS ++  LC  G    +  I   M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG  P I ++ +LL+GY   G   E   L + M+R G  P+   +S LI      G +
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D+A+ V  +M +    PN  TY A+I    K+G +  A   + +MI  G SP  + Y  +
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC  N + +A  LI +M       NT+ FN+ I   C  GRV  + KL + M +   
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+ TYN L++G     ++ EA +L++ +   G++ N VTY+T+++G C+   + +A  
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L  +M   G   D IT+NII+    +  +   A +L  RI   G    ++ +Y  +L G+
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG-TQIELSTYNIILHGL 626

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           C +    +A    Q +    +     T+N+++ +L 
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662



 Score =  219 bits (558), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 219/422 (51%), Gaps = 14/422 (3%)

Query: 152 EEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGID---PNVITY 203
           E+AR +    +R G G S+Y  N  +  + ++     A      M   G D   P++ TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRMI 262
             +I   C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN---SCPPNVTTYSALIDGFAKAG 319
             G +PNV +Y+ L+ GLC      EA+ + + M ++     PP+V +Y+ +I+GF K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +   A   ++ M+  G  P+VV Y  ++  LC+     +A  ++  M      P+ +T+N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + + G C  G+   A+  L +M+     P++ TY+ L+D L +  R  EA ++   + K 
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++  I TY T+L G    G +VE   LL  M+  G   D   F+I+I AY KQGKV+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +  ++R  G  NP+ ++Y +++  +C SG +++A +Y ++M++EG+ P    +N L+ 
Sbjct: 391 MLVFSKMRQQG-LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 560 SL 561
            L
Sbjct: 450 GL 451



 Score =  207 bits (528), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 255/551 (46%), Gaps = 21/551 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L  M   GV      + S+++ Y   G  ++A+    ++R  G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++D L    R      I+ +M + G++P + TY  LL+       +   +
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
            LL  M   G  PD   ++ ++ +  K G+V++A  +   MR          Y A+I  L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++E+A     +M+D G+ P  I Y+++I  LC     E +  ++ +M  RG   N 
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F S++  +   GR  E+  L+  M+R G  PNV+ Y+TLI+G C  G MDEA+ +   
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TYS LI+G+ K   +  A  ++  M S+G SP+++ Y  +++ L Q   
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT---- 411
              A  L  ++          T+N  + GLC     D A+    QM Q  CL ++     
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEAR 652

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+N ++D LL+V R  EA +L       G+  N  TY  +   +   G++ E  QL   M
Sbjct: 653 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNA---IQLLDRIRGGGEWNPDIISYTSLLWGICN 528
              G  +D+   N I+    ++G++  A   + ++D      E      S  SL   + +
Sbjct: 713 EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA-----STASLFIDLLS 767

Query: 529 SGGMQEAFIYL 539
            G  QE + +L
Sbjct: 768 GGKYQEYYRFL 778



 Score =  121 bits (304), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 130/244 (53%), Gaps = 8/244 (3%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +P++  Y  ++   C+        + +  +  +    + + F   +KG
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV---TEIEKCG 440
           LC   R   AM + L +M +  C+PN+ +YN LL GL   NR +EA EL+    +    G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              ++V+Y T+++G  + G   +A+    +ML  G   D +T+N II A CK   ++ A+
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++L+ +   G   PD ++Y S+L G C+SG  +EA  +L+KM ++G+ P+  T+++L+  
Sbjct: 252 EVLNTMVKNGVM-PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310

Query: 561 LFSN 564
           L  N
Sbjct: 311 LCKN 314


>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
           OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
          Length = 763

 Score =  273 bits (698), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 296/572 (51%), Gaps = 8/572 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +IEKLG   + + ++ +L  M+   G    EGV++  + +Y R G  ++A+ +F R+  +
Sbjct: 46  VIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFY 105

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PTV  YN I+  L+    F   + +Y  M+  G+ P+V+++ I +K+ CK +R   A
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAA 165

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVSV----YNALING 174
            +LL  M ++GC  + V+Y T+V    +     E  EL  +   SGVS+    +N L+  
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRV 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK+  ++E   LL +++ RG+ PN+ TY+  I  LC  G ++ ++ ++G +  +G  P+
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +L+ G     +  EA     +M+ EG  P+   Y+TLI G C  G +  A  +  
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
               N   P+  TY +LIDG    G    A  ++N  +  G  PNV+ Y  ++K L    
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +A  L  +M+ +   P   TFN  + GLC  G V  A  L+  M      P+I T+N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G     +++ A E++  +   G+  ++ TYN++L+G+C+     +  +    M+ +
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   +  TFNI++ + C+  K++ A+ LL+ ++     NPD +++ +L+ G C +G +  
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS-VNPDAVTFGTLIDGFCKNGDLDG 584

Query: 535 AFIYLQKMLNE-GICPNFATWNVLVRSLFSNL 565
           A+   +KM     +  +  T+N+++ +    L
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616



 Score =  234 bits (596), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/562 (27%), Positives = 275/562 (48%), Gaps = 17/562 (3%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D    +  +M+  G++     F   + S+ +      AL++   +   G +  V  Y  
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++     EN  +    ++  M   G+   + T+N LL+ LCK   V    KLL ++  +G
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCKEHKIEEAF 185
             P+  +Y   +  +C+ G+++ A R +      G    V  YN LI GLCK  K +EA 
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L +MV+ G++P+  TY+T+I+  C  G V+ +  I+G     G  P+  ++ SL+ G 
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G T+ A  L+N  + +G  PNV+ Y+TLI GL + G + EA  ++ +M E    P V
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ L++G  K G +  A  +   MIS G  P++  +  ++           A  +++ 
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P+  T+N+ + GLC   + +  M+    M +  C PN+ T+N LL+ L R  +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA--ITF 483
           + EA  L+ E++   +  + VT+ T++ G C+ G +  A+ L  KM  E  K+ +   T+
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME-EAYKVSSSTPTY 605

Query: 484 NIIIYAYCKQGKVNNAIQL----LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
           NIII+A+ ++  V  A +L    +DR  G     PD  +Y  ++ G C +G +   + +L
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLG-----PDGYTYRLMVDGFCKTGNVNLGYKFL 660

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
            +M+  G  P+  T   ++  L
Sbjct: 661 LEMMENGFIPSLTTLGRVINCL 682



 Score =  226 bits (577), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/539 (25%), Positives = 259/539 (48%), Gaps = 7/539 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  +G   +   + +V+  +       +  ++F ++   G+   +  +N +L  L 
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        +   + + G+ PN+FTYN+ ++ LC+   +DGA +++  +  +G  PD +
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287

Query: 137 SYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++  +CK  + +EA   L      G+      YN LI G CK   ++ A  ++ + 
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G  P+  TY ++I  LC  G    +L +  +   +G  PN+  + +L+KG    G  
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L N M  +G +P V  ++ L++GLC  G + +A  +   M      P++ T++ L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G++    +  A +I + M+ NG  P+V  Y  ++  LC+ + F       + M  + C
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  TFN  ++ LC   ++D A+ LL++MK     P+  T+  L+DG  +   +  A+ 
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587

Query: 432 LVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           L  ++E+   +  +  TYN I+H       V  A +L  +M+      D  T+ +++  +
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           CK G VN   + L  +   G + P + +   ++  +C    + EA   + +M+ +G+ P
Sbjct: 648 CKTGNVNLGYKFLLEMMENG-FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705



 Score =  211 bits (537), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 248/551 (45%), Gaps = 68/551 (12%)

Query: 48  QALKMFYRIR-EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD-GMEPNVFTYNI 105
           +AL+MF  +R E G K T+  Y  +++ L    +F  +  +  +M+ + G       Y  
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
            +K   +  +V  A  +   M    C P   SY  I+S +   G  ++A ++ MR     
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR----- 136

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
                                    M DRGI P+V +++  + S C       +L +L  
Sbjct: 137 -------------------------MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNN 171

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +GC  N+ ++ +++ G+       E  +L+ +M+  G    +  ++ L+  LC  G 
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           + E   +  ++ +    PN+ TY+  I G  + G L GA ++   +I  G  P+V+ Y  
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+N+ F +A   + KM  E   P++ T+NT I G C  G V  A +++       
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +P+  TY  L+DGL        A  L  E    GI+ N++ YNT++ G+   GM++EA 
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411

Query: 466 QLLGK-----------------------------------MLIEGTKLDAITFNIIIYAY 490
           QL  +                                   M+ +G   D  TFNI+I+ Y
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
             Q K+ NA+++LD +   G  +PD+ +Y SLL G+C +   ++     + M+ +G  PN
Sbjct: 472 STQLKMENALEILDVMLDNG-VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530

Query: 551 FATWNVLVRSL 561
             T+N+L+ SL
Sbjct: 531 LFTFNILLESL 541



 Score =  201 bits (511), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 41/506 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   GVS     F  ++    + G  ++  K+  ++ + G+ P +  YN  +  L 
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +   +   G +P+V TYN L+  LCKN++   A   L +M N+G  PD+ 
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T+++  CK G V+ A  +        F      Y +LI+GLC E +   A  L  E 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +GI PNVI Y+T+I  L + G +  +  +  +M  +G  P + +F  L+ G    G  
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L   MI +G+ P++  ++ LIHG  +   M+ A+ +   M +N   P+V TY++L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ++G  K        + +  M+  GC+PN+  +  +++ LC+     +A  L+E+M  ++ 
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY--------------------------- 404
            P+ VTF T I G C  G +D A  L  +M++                            
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622

Query: 405 --------ECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                    CL P+  TY  ++DG  +   V   ++ + E+ + G   ++ T   +++ +
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAI 481
           C    V EA  ++ +M+ +G   +A+
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  170 bits (431), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 220/482 (45%), Gaps = 41/482 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +K ++   + LL ++   GV  +   +   I    + G  + A++M   + E G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  YN+++  L   ++F         M  +G+EP+ +TYN L+   CK   V  A 
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
           +++ +    G  PD  +Y +++  +C  G+   A  L     G G+     +YN LI GL
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG--------------------- 214
             +  I EA  L  EM ++G+ P V T++ +++ LC +G                     
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 215 --------------NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
                          +E +L IL  M   G +P+++++ SLL G     +  +  + +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+ +G  PN+  ++ L+  LC    +DEA+ +  +M+  S  P+  T+  LIDGF K G+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 321 LLGASQIWNRMI-SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           L GA  ++ +M  +   S +   Y  ++    +      A  L ++M      P+  T+ 
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + G C  G V+   K L +M +   +P++TT   +++ L   +RV EA  ++  + + 
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 440 GI 441
           G+
Sbjct: 702 GL 703



 Score =  161 bits (408), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 209/450 (46%), Gaps = 7/450 (1%)

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVS------VYNALINGLCKEHKIEEAFWLLCE 190
           +Y +++  +   G+ E   E+ +     V       VY   +    ++ K++EA  +   
Sbjct: 42  TYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M     +P V +Y+ I+S L D G  + +  +  +M  RG  P+++SFT  +K +    R
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            H A  L N M  +G   NVVAY T++ G        E   +  +M  +     ++T++ 
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+    K G++    ++ +++I  G  PN+  Y   ++ LCQ      A  ++  +  + 
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ +T+N  I GLC   +   A   L +M      P+  TYN L+ G  +   V+ A 
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            +V +    G   +  TY +++ G+C  G    A  L  + L +G K + I +N +I   
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
             QG +  A QL + +   G   P++ ++  L+ G+C  G + +A   ++ M+++G  P+
Sbjct: 402 SNQGMILEAAQLANEMSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             T+N+L+    + L     + ILD ++ N
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDN 490



 Score =  154 bits (390), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 205/461 (44%), Gaps = 51/461 (11%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L +M  EG+      + ++I  Y + G+ + A ++       G  P    Y  ++D L  
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           E   +    +++     G++PNV  YN L+K L     +  A +L  EM  KG  P+  +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428

Query: 138 YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           +  +V+ +CK+G V +A  L     +  +   +  +N LI+G   + K+E A  +L  M+
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           D G+DP+V TY+++++ LC     E  +     M  +GC PN+ +F  LL+      +  
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE-----NSCP----- 302
           EA  L   M  +   P+ V + TLI G C NG +D A ++  +MEE     +S P     
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608

Query: 303 --------------------------PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                                     P+  TY  ++DGF K GN+    +    M+ NG 
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++     ++  LC  +  ++A  +I +M  +   P  V  NT    +C   + + A  
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NT----ICDVDKKEVAAP 722

Query: 397 --LLDQMKQYECLPNITTYNELLDGLL-RVNRVKEAFELVT 434
             +L+ + +  C+     Y  L DGL  +  R K+ F +V 
Sbjct: 723 KLVLEDLLKKSCI-TYYAYELLFDGLRDKRLRKKKGFTVVA 762



 Score =  134 bits (336), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 138/274 (50%), Gaps = 9/274 (3%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G   + DG   L++ M  +G       F  +I+ Y      E AL++   + + G+ P
Sbjct: 438 KMGCVSDADG---LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  YN +L+ L   ++F  +   Y  M   G  PN+FT+NILL++LC+  ++D A  LL
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL------AMRFGSGVSVYNALINGLCK 177
            EM NK   PDAV++ T++   CK G ++ A  L      A +  S    YN +I+   +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           +  +  A  L  EMVDR + P+  TY  ++   C  GNV      L +M   G  P++ +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
              ++    +  R +EA+ + +RM+++G +P  V
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708


>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
           OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
          Length = 598

 Score =  270 bits (689), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 263/495 (53%), Gaps = 17/495 (3%)

Query: 80  RFSMINPIYSNMKRDGMEPNV--------FTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +F  ++  YSN   +G   +V           N  L+ + +   ++  +K L  M   G 
Sbjct: 74  KFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGN 133

Query: 132 APDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGLCKEHKIEEAFW 186
            PD +  TT++   C+LG+  +A + L +  GSG    V  YN +I+G CK  +I  A  
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +L  M    + P+V+TY+TI+ SLCD G ++ ++ +L +M  R C P++ ++T L++   
Sbjct: 194 VLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                  A  L + M   G  P+VV Y+ L++G+C  G +DEA+     M  + C PNV 
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T++ ++      G  + A ++   M+  G SP+VV +  ++  LC+  +  +A  ++EKM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
               C PN++++N  + G C   ++D A++ L++M    C P+I TYN +L  L +  +V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           ++A E++ ++   G    ++TYNT++ G+ +AG   +A +LL +M  +  K D IT++ +
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +    ++GKV+ AI+        G   P+ +++ S++ G+C S     A  +L  M+N G
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549

Query: 547 ICPNFATWNVLVRSL 561
             PN  ++ +L+  L
Sbjct: 550 CKPNETSYTILIEGL 564



 Score =  263 bits (673), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 244/470 (51%), Gaps = 8/470 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G  E+  K    +   G  P +     ++       +      I   ++  G  P+V 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TYN+++   CK   ++ A  +L  M     +PD V+Y TI+ S+C  G++++A E+  R 
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 162 -----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y  LI   C++  +  A  LL EM DRG  P+V+TY+ +++ +C  G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M   GC PN+ +   +L+     GR  +A  L   M+R+GF P+VV ++ L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+ LC  G +  A+ +  +M ++ C PN  +Y+ L+ GF K   +  A +   RM+S GC
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y  M+  LC++     A  ++ +++ + C P  +T+NT I GL   G+   A+K
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LLD+M+  +  P+  TY+ L+ GL R  +V EA +   E E+ GI+ N VT+N+I+ G+C
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           ++     A   L  M+  G K +  ++ I+I     +G    A++LL+ +
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  229 bits (584), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 232/446 (52%), Gaps = 8/446 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  + R+G   +A K+   +   G  P V  YN ++       +   IN   S + R 
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC---KAGEINNALSVLDRM 198

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            + P+V TYN +L++LC + ++  A ++L  M  + C PD ++YT ++ + C+   V  A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258

Query: 155 REL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            +L   MR       V  YN L+NG+CKE +++EA   L +M   G  PNVIT++ I+ S
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +C  G    +  +L  M  +G +P++ +F  L+      G    A D+  +M + G  PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            ++Y+ L+HG C    MD A+    +M    C P++ TY+ ++    K G +  A +I N
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           ++ S GCSP ++ Y  ++  L +     +A  L+++M  ++  P+T+T+++ + GL   G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +VD A+K   + ++    PN  T+N ++ GL +  +   A + +  +   G + N  +Y 
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEG 475
            ++ G+   GM  EA +LL ++  +G
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  178 bits (452), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 199/397 (50%), Gaps = 8/397 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI+    +L +M    VS     + +++ S    G  +QA+++  R+ +    P V  Y 
Sbjct: 187 EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A   ++       +   M+  G  P+V TYN+L+  +CK  R+D A K L +M + 
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           GC P+ +++  I+ S+C  G+  +A +L        F   V  +N LIN LC++  +  A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M   G  PN ++Y+ ++   C    ++ ++  L +M  RGC P+I ++ ++L  
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A ++ N++  +G  P ++ Y+T+I GL   G   +A+ +  +M      P+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TYS+L+ G ++ G +  A + ++     G  PN V +  ++  LC++    +A   + 
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            M    C PN  ++   I+GL   G    A++LL+++
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  173 bits (439), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 181/361 (50%), Gaps = 33/361 (9%)

Query: 9   CEIDGVQY---LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C   GV +   LL +M+  G +     +  ++N   + G  ++A+K    +   G +P V
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             +N IL ++ +  R+     + ++M R G  P+V T+NIL+  LC+   +  A  +L +
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           M   GC P+++SY                              N L++G CKE K++ A 
Sbjct: 370 MPQHGCQPNSLSY------------------------------NPLLHGFCKEKKMDRAI 399

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L  MV RG  P+++TY+T++++LC  G VE ++ IL Q+  +GC+P + ++ +++ G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+T +A  L + M  +   P+ + YS+L+ GL   G +DEA+   ++ E     PN 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T+++++ G  K+     A      MI+ GC PN  +YT +++ L    M  +A  L+ +
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579

Query: 366 M 366
           +
Sbjct: 580 L 580



 Score =  162 bits (410), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 40/365 (10%)

Query: 230 GCNPNIHSFTSLLKGYL-LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           G N     F +L  GY    G  H +S      +   F    V  +  +  +   G ++E
Sbjct: 67  GLNGRAQKFETLSSGYSNSNGNGHYSS------VNSSFALEDVESNNHLRQMVRTGELEE 120

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV- 347
                  M  +   P++   + LI GF + G    A++I   +  +G  P+V+ Y  M+ 
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180

Query: 348 -------------------------------KVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
                                          + LC +    QA  ++++M   +C P+ +
Sbjct: 181 GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+   I+  C    V  AMKLLD+M+   C P++ TYN L++G+ +  R+ EA + + ++
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
              G Q N++T+N IL  +C  G  ++A +LL  ML +G     +TFNI+I   C++G +
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             AI +L+++   G   P+ +SY  LL G C    M  A  YL++M++ G  P+  T+N 
Sbjct: 361 GRAIDILEKMPQHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419

Query: 557 LVRSL 561
           ++ +L
Sbjct: 420 MLTAL 424



 Score =  134 bits (336), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 5/264 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL  M  +G S S   F  +IN   R GL  +A+ +  ++ + G +P    YN +L 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +          M   G  P++ TYN +L ALCK+ +V+ A ++L ++ +KGC+P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
             ++Y T++  + K G+  +A +L     A         Y++L+ GL +E K++EA    
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E    GI PN +T+++I+  LC     + ++  L  M  RGC PN  S+T L++G    
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567

Query: 249 GRTHEASDLWNRMIREGFLPNVVA 272
           G   EA +L N +  +G +    A
Sbjct: 568 GMAKEALELLNELCNKGLMKKSSA 591



 Score =  130 bits (326), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 124/232 (53%), Gaps = 4/232 (1%)

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           ++ + +     +    +E M +    P+ +   T I+G C  G+   A K+L+ ++    
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++ TYN ++ G  +   +  A  +   +++  +  ++VTYNTIL  +C +G + +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L +ML      D IT+ I+I A C+   V +A++LLD +R  G   PD+++Y  L+ GI
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG-CTPDVVTYNVLVNGI 284

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           C  G + EA  +L  M + G  PN  T N+++RS+ S    +    +L D++
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336



 Score = 93.6 bits (231), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 92/164 (56%), Gaps = 4/164 (2%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N  L  ++R   ++E F+ +  +   G   +I+   T++ G CR G   +A ++L  +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G   D IT+N++I  YCK G++NNA+ +LDR+      +PD+++Y ++L  +C+SG ++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLK 221

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +A   L +ML     P+  T+ +L+ +   + G    + +LD++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265



 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 78/157 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  +++    +L Q+  +G S     + +VI+   + G   +A+K+   +R   
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    Y+ ++  L  E +       +   +R G+ PN  T+N ++  LCK+ + D A 
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
             LV M N+GC P+  SYT ++  +   G  +EA EL
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576


>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
           OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
          Length = 629

 Score =  267 bits (683), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 273/549 (49%), Gaps = 17/549 (3%)

Query: 25  GVSCSEGVFISVINSYRRVGL--------AEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           G  C E  F S    YR +           + A+ +F  + +    P++  +N +L A+ 
Sbjct: 35  GSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVA 94

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N+F ++  +   M+  G+  +++TY+I +   C+ +++  A  +L +M   G  PD V
Sbjct: 95  KMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV 154

Query: 137 SYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + +++++  C   ++ +A  L      M +      +  LI+GL   +K  EA  L+ +M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V RG  P+++TY T+++ LC  G+++ +L +L +M       N+  F +++         
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A DL+  M  +G  PNVV Y++LI+ LC+ G   +A  +   M E    PNV T++AL
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ID F K G L+ A ++   MI     P+ + Y  ++   C +N   +A  + + M  ++C
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  T+NT I G C C RV+  ++L  +M Q   + N  TY  ++ G  +      A  
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++    +  +I+TY+ +LHG+C  G +  A  +   +     +L+   +N +I   C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K GKV  A  L   +       PD+++Y +++ G+C+   +QEA    +KM  +G  PN 
Sbjct: 515 KAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570

Query: 552 ATWNVLVRS 560
            T+N L+R+
Sbjct: 571 GTYNTLIRA 579



 Score =  259 bits (662), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 268/524 (51%), Gaps = 10/524 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +QM+  G+S     +   IN + R      AL +  ++ + G +P +   + +L+     
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R S    +   M   G +P+ FT+  L+  L  +N+   A  L+ +M  +GC PD V+Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 139 TTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T+V+ +CK G ++ A  L     A R  + V ++N +I+ LCK   +E A  L  EM  
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +GI PNV+TY+++I+ LC+ G    +  +L  M  +  NPN+ +F +L+  +   G+  E
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L   MI+    P+ + Y+ LI+G C +  +DEA  +   M    C PN+ TY+ LI+
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF K   +    +++  M   G   N V YT +++   Q      A  + ++M     P 
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + +T++  + GLC  G++D A+ +   +++ E   NI  YN +++G+ +  +V EA++L 
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +    I+ ++VTYNT++ G+C   ++ EA  L  KM  +GT  ++ T+N +I A  + 
Sbjct: 527 CSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
                + +L+  +R  G       S  SL+  + + G + ++F+
Sbjct: 584 CDRAASAELIKEMRSSGFVGD--ASTISLVTNMLHDGRLDKSFL 625



 Score =  193 bits (490), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 206/430 (47%), Gaps = 8/430 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  ++ + G +P +  Y  +++ L 
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M+   ++ NV  +N ++ +LCK   V+ A  L  EM  KG  P+ V
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y ++++ +C  G+  +A       L  +    V  +NALI+   KE K+ EA  L  EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP+ ITY+ +I+  C    ++ +  +   M  + C PNI ++ +L+ G+    R 
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +  +L+  M + G + N V Y+T+I G    G  D A  V  QM  N  P ++ TYS L
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G    G L  A  I+  +  +    N+  Y  M++ +C+     +A  L   ++ +  
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK-- 532

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ VT+NT I GLC    +  A  L  +MK+   LPN  TYN L+   LR      + E
Sbjct: 533 -PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591

Query: 432 LVTEIEKCGI 441
           L+ E+   G 
Sbjct: 592 LIKEMRSSGF 601



 Score =  191 bits (484), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 210/420 (50%), Gaps = 11/420 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       + +V+N   + G  + AL +  ++    +K  V I+N I+D+L 
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +++ M+  G+ PNV TYN L+  LC   R   A +LL  M  K   P+ V
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++ +  K G++ EA +L               YN LING C  ++++EA  +   M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +   PN+ TY+T+I+  C    VE  + +  +M  RG   N  ++T++++G+   G  
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ +M+      +++ YS L+HGLCS G +D A+ +   ++++    N+  Y+ +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  KAG +    + W+   S    P+VV Y  M+  LC   +  +A  L  KM  +  
Sbjct: 510 IEGMCKAGKV---GEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566

Query: 372 PPNTVTFNTFIKG-LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            PN+ T+NT I+  L  C R   A +L+ +M+    + + +T + L+  +L   R+ ++F
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASA-ELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSF 624


>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
           SV=1
          Length = 637

 Score =  267 bits (682), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 274/543 (50%), Gaps = 19/543 (3%)

Query: 39  SYR---RVGL----AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           SYR   R GL    A+ A+ +F  +      PTV  ++ +  A+    ++ ++  +   M
Sbjct: 55  SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +  G+  N++T +I++   C+  ++  A+  + ++   G  P+ ++++T+++ +C  G+V
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA EL  R         +   N L+NGLC   K  EA  L+ +MV+ G  PN +TY  +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++ +C  G    ++ +L +M  R    +   ++ ++ G    G    A +L+N M  +G 
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             N++ Y+ LI G C+ G  D+   +   M +    PNV T+S LID F K G L  A +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   MI  G +P+ + YT ++   C+ N   +A+ +++ M  + C PN  TFN  I G C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R+D  ++L  +M     + +  TYN L+ G   + ++  A EL  E+    +  NIV
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY  +L G+C  G   +A ++  K+     +LD   +NIII+  C   KV++A  L   +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G   P + +Y  ++ G+C  G + EA +  +KM  +G  P+  T+N+L+R+      
Sbjct: 535 PLKG-VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA------ 587

Query: 567 HLG 569
           HLG
Sbjct: 588 HLG 590



 Score =  253 bits (646), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 276/533 (51%), Gaps = 7/533 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D V  L +QM+++G++ +      +IN + R      A     +I + G +P    ++
Sbjct: 103 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS 162

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  E R S    +   M   G +P++ T N L+  LC + +   A  L+ +M   
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+AV+Y  +++ +CK GQ   A EL  +            Y+ +I+GLCK   ++ A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EM  +GI  N+ITY+ +I   C+ G  +    +L  M  R  NPN+ +F+ L+  
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           ++  G+  EA +L   MI  G  P+ + Y++LI G C    +D+A  +   M    C PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ LI+G+ KA  +    +++ +M   G   + V Y  +++  C+    + A  L +
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M     PPN VT+   + GLC  G  + A+++ +++++ +   +I  YN ++ G+   +
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +V +A++L   +   G++  + TYN ++ G+C+ G + EA  L  KM  +G   D  T+N
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           I+I A+   G    +++L++ ++  G ++ D  S   ++  + + G ++++F+
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCG-FSVD-ASTIKMVIDMLSDGRLKKSFL 633



 Score =  141 bits (355), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 170/360 (47%), Gaps = 5/360 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G++ +   +  +I  +   G  +   K+   + +  
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D+ + E +      ++  M   G+ P+  TY  L+   CK N +D A 
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
           +++  M +KGC P+  ++  +++  CK  ++++  EL  +       +    YN LI G 
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  L  EMV R + PN++TY  ++  LCD G  E +L I  ++       +I
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A DL+  +  +G  P V  Y+ +I GLC  G + EA  +  +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE+   P+  TY+ LI      G+   + ++   +   G S +      ++ +L    +
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628


>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
           OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
          Length = 559

 Score =  264 bits (675), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 259/503 (51%), Gaps = 6/503 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A+    +F ++  +   M+R G+  N++TYNIL+   C+ +++  A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+ +++++  C   ++ +A  L      M +      +  LI+GL  
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV RG  PN++TY  +++ LC  G+++ +  +L +M       ++  
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F +++          +A +L+  M  +G  PNVV YS+LI  LCS G   +A  +   M 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PN+ T++ALID F K G  + A ++ + MI     P++  Y  ++   C ++   
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  + E M  ++C P+  T+NT IKG C   RV+   +L  +M     + +  TY  L+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            GL        A ++  ++   G+  +I+TY+ +L G+C  G + +A ++   M     K
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           LD   +  +I   CK GKV++   L   +   G   P++++Y +++ G+C+   +QEA+ 
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYA 486

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
            L+KM  +G  P+  T+N L+R+
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRA 509



 Score =  262 bits (669), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 273/513 (53%), Gaps = 5/513 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L ++M+  G+S +   +  +IN + R      AL +  ++ + G
Sbjct: 16  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P++   + +L+      R S    +   M   G  P+  T+  L+  L  +N+   A 
Sbjct: 76  YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  +GC P+ V+Y  +V+ +CK G ++ A  L     A +  + V ++N +I+ L
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++A  L  EM  +GI PNV+TYS++IS LC  G    +  +L  M  +  NPN+
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L+  ++  G+  EA  L + MI+    P++  Y++LI+G C +  +D+A  +   
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P++ TY+ LI GF K+  +   ++++  M   G   + V YT +++ L  +  
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +  PP+ +T++  + GLC  G+++ A+++ D M++ E   +I  Y  
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V + ++L   +   G++ N+VTYNT++ G+C   ++ EA+ LL KM  +G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
              D+ T+N +I A+ + G    + +L+  +R 
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528



 Score =  243 bits (621), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 247/481 (51%), Gaps = 6/481 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN 114
           +++  G+   +  YN +++     ++ S+   +   M + G EP++ T + LL   C   
Sbjct: 35  KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYN 169
           R+  A  L+ +M   G  PD +++TT++  +    +  EA  L  R         +  Y 
Sbjct: 95  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            ++NGLCK   I+ AF LL +M    I+ +V+ ++TII SLC   +V+ +L +  +M  +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN+ +++SL+      GR  +AS L + MI +   PN+V ++ LI      G   EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             +   M + S  P++ TY++LI+GF     L  A Q++  M+S  C P++  Y  ++K 
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C++        L  +M+      +TVT+ T I+GL   G  D A K+  QM      P+
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TY+ LLDGL    ++++A E+   ++K  I+L+I  Y T++ G+C+AG V + + L  
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            + ++G K + +T+N +I   C +  +  A  LL +++  G   PD  +Y +L+      
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLRD 513

Query: 530 G 530
           G
Sbjct: 514 G 514



 Score =  218 bits (555), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 5/428 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  R+ + G +P +  Y  +++ L 
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M+   +E +V  +N ++ +LCK   VD A  L  EM  KG  P+ V
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A +L       +    +  +NALI+   KE K  EA  L  +M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TY+++I+  C    ++ +  +   M  + C P++ ++ +L+KG+    R 
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            + ++L+  M   G + + V Y+TLI GL  +G  D A  V  QM  +  PP++ TYS L
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG    G L  A ++++ M  +    ++  YT M++ +C+         L   ++ +  
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+NT I GLC    +  A  LL +MK+   LP+  TYN L+   LR      + E
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521

Query: 432 LVTEIEKC 439
           L+ E+  C
Sbjct: 522 LIREMRSC 529



 Score =  211 bits (536), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 215/397 (54%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M   GI  N+ TY+ +I+  C    +  +L +LG+M 
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY  G R  +A  L ++M+  G+ P+ + ++TLIHGL  +    
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M +  C PN+ TY  +++G  K G++  A  + N+M +     +VV +  ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+N L+D  ++  +  EA +L  ++ K  I  +I TYN++++G C    + +A Q+
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D  T+N +I  +CK  +V +  +L   +   G    D ++YT+L+ G+ 
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLF 371

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + G    A    ++M+++G+ P+  T+++L+  L +N
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408



 Score =  183 bits (464), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N   + G  + A  +  ++    ++  V I+N I+D+L           ++  M+  G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV TY+ L+  LC   R   A +LL +M  K   P+ V++  ++ +  K G+  EA 
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L            +  YN+LING C   ++++A  +   MV +   P++ TY+T+I   
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    VE    +  +M  RG   +  ++T+L++G    G    A  ++ +M+ +G  P++
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + YS L+ GLC+NG +++A+ V   M+++    ++  Y+ +I+G  KAG +     ++  
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G  PNVV Y  M+  LC   +  +A++L++KM  +   P++ T+NT I+     G 
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              + +L+ +M+    + + +T   L+  +L   R+ ++F
Sbjct: 516 KAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 554



 Score =  168 bits (426), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 186/367 (50%), Gaps = 1/367 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P++  ++ ++S++  +   +  + +  +M   G + N++++  L+  +    +   A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             +M++ G+ P++V  S+L++G C    + +AV++  QM E    P+  T++ LI G   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
                 A  + +RM+  GC PN+V Y  +V  LC+      A +L+ KM       + V 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           FNT I  LC    VD A+ L  +M+     PN+ TY+ L+  L    R  +A +L++++ 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +  I  N+VT+N ++    + G  VEA +L   M+      D  T+N +I  +C   +++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A Q+ + +     + PD+ +Y +L+ G C S  +++     ++M + G+  +  T+  L
Sbjct: 308 KAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 558 VRSLFSN 564
           ++ LF +
Sbjct: 367 IQGLFHD 373



 Score =  140 bits (353), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 154/299 (51%), Gaps = 3/299 (1%)

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M++   LP++  ++ L+  +      D  +S+  +M+      N+ TY+ LI+ F +   
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  +  +M+  G  P++V  + ++   C       A +L+++M      P+T+TF T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GL    +   A+ L+D+M Q  C PN+ TY  +++GL +   +  AF L+ ++E   
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I+ ++V +NTI+  +C+   V +A  L  +M  +G + + +T++ +I   C  G+ ++A 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 501 QLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           QLL D I    + NP+++++ +L+      G   EA      M+   I P+  T+N L+
Sbjct: 241 QLLSDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297



 Score = 64.7 bits (156), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    + D  Q + +QM  +GV      +  +++     G  E+AL++F  +++  
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  + IY  +++ +    +      ++ ++   G++PNV TYN ++  LC    +  AY
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA----LINGLC 176
            LL +M   G  PD+ +Y T++ +  + G    + EL     S   V +A    L+  + 
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545

Query: 177 KEHKIEEAF 185
            + +++++F
Sbjct: 546 HDGRLDKSF 554


>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
           OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
          Length = 634

 Score =  264 bits (674), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 259/503 (51%), Gaps = 6/503 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A+    +F ++  +   M+R  +   ++TYNIL+   C+ +++  A  L
Sbjct: 83  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+ +++++  C   ++ +A  L      M +      +  LI+GL  
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV RG  PN++TY  +++ LC  G+ + +L +L +M       ++  
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F +++          +A +L+  M  +G  PNVV YS+LI  LCS G   +A  +   M 
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PN+ T++ALID F K G  + A ++++ MI     P++  Y  +V   C ++   
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  + E M  ++C P+ VT+NT IKG C   RV+   +L  +M     + +  TY  L+
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            GL        A ++  ++   G+  +I+TY+ +L G+C  G + +A ++   M     K
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           LD   +  +I   CK GKV++   L   +   G   P++++Y +++ G+C+   +QEA+ 
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYA 561

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
            L+KM  +G  PN  T+N L+R+
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRA 584



 Score =  258 bits (659), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 256/477 (53%), Gaps = 5/477 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN + R      AL +  ++ + G +P++   + +L+      R S    +   M   G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+  T+  L+  L  +N+   A  L+  M  +GC P+ V+Y  +V+ +CK G  + A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L     A +  + V ++N +I+ LCK   +++A  L  EM  +GI PNV+TYS++IS L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G    +  +L  M  +  NPN+ +F +L+  ++  G+  EA  L++ MI+    P++
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y++L++G C +  +D+A  +   M    C P+V TY+ LI GF K+  +   ++++  
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G   + V YT +++ L  +     A  + ++M  +  PP+ +T++  + GLC  G+
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+++ D M++ E   +I  Y  +++G+ +  +V + ++L   +   G++ N+VTYNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           ++ G+C   ++ EA+ LL KM  +G   ++ T+N +I A+ + G    + +L+  +R
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602



 Score =  218 bits (554), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 5/428 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  R+ + G +P +  Y  +++ L 
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M+   +E +V  +N ++ +LCK   VD A  L  EM  KG  P+ V
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A +L       +    +  +NALI+   KE K  EA  L  +M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TY+++++  C    ++ +  +   M  + C P++ ++ +L+KG+    R 
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            + ++L+  M   G + + V Y+TLI GL  +G  D A  V  QM  +  PP++ TYS L
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG    G L  A ++++ M  +    ++  YT M++ +C+         L   ++ +  
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+NT I GLC    +  A  LL +MK+   LPN  TYN L+   LR      + E
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596

Query: 432 LVTEIEKC 439
           L+ E+  C
Sbjct: 597 LIREMRSC 604



 Score =  205 bits (521), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 213/397 (53%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M    I   + TY+ +I+  C    +  +L +LG+M 
Sbjct: 88  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY  G R  +A  L ++M+  G+ P+ + ++TLIHGL  +    
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M +  C PN+ TY  +++G  K G+   A  + N+M +     +VV +  ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+N L+D  ++  +  EA +L  ++ K  I  +I TYN++++G C    + +A Q+
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D +T+N +I  +CK  +V +  +L   +   G    D ++YT+L+ G+ 
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLF 446

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + G    A    ++M+++G+ P+  T+++L+  L +N
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483



 Score =  189 bits (479), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 205/400 (51%), Gaps = 6/400 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N   + G  + AL +  ++    ++  V I+N I+D+L           ++  M+  G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV TY+ L+  LC   R   A +LL +M  K   P+ V++  ++ +  K G+  EA 
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L            +  YN+L+NG C   ++++A  +   MV +   P+V+TY+T+I   
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    VE    +  +M  RG   +  ++T+L++G    G    A  ++ +M+ +G  P++
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + YS L+ GLC+NG +++A+ V   M+++    ++  Y+ +I+G  KAG +     ++  
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G  PNVV Y  M+  LC   +  +A++L++KM  +   PN+ T+NT I+     G 
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              + +L+ +M+    + + +T   L+  +L   R+ ++F
Sbjct: 591 KAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 629



 Score =  172 bits (436), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 182/338 (53%), Gaps = 5/338 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++M+ +G+  +   + S+I+     G    A ++   + E  
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  +N ++DA + E +F     +Y +M +  ++P++FTYN L+   C ++R+D A 
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
           ++   M +K C PD V+Y T++   CK  +VE+     RE++ R   G +V Y  LI GL
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             +   + A  +  +MV  G+ P+++TYS ++  LC+ G +E +L +   M       +I
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           + +T++++G    G+  +  DL+  +  +G  PNVV Y+T+I GLCS   + EA ++  +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           M+E+   PN  TY+ LI    + G+   ++++   M S
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603



 Score =  157 bits (397), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 181/371 (48%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ + D    LL +M+   +     +F ++I+S  +    + AL +F  +   G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++  L +  R+S  + + S+M    + PN+ T+N L+ A  K  +   A 
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  +M  +   PD  +Y ++V+  C   ++++A+++     S      V  YN LI G 
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++E+   L  EM  RG+  + +TY+T+I  L   G+ + +  +  QM   G  P+I
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++ LL G    G+  +A ++++ M +     ++  Y+T+I G+C  G +D+   +   
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      PNV TY+ +I G      L  A  +  +M  +G  PN   Y  +++   ++  
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590

Query: 356 FHQAHSLIEKM 366
              +  LI +M
Sbjct: 591 KAASAELIREM 601



 Score = 62.8 bits (151), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    + D  Q + +QM  +GV      +  +++     G  E+AL++F  +++  
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  + IY  +++ +    +      ++ ++   G++PNV TYN ++  LC    +  AY
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA----LINGLC 176
            LL +M   G  P++ +Y T++ +  + G    + EL     S   V +A    L+  + 
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620

Query: 177 KEHKIEEAF 185
            + +++++F
Sbjct: 621 HDGRLDKSF 629


>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
           SV=2
          Length = 838

 Score =  264 bits (674), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 273/553 (49%), Gaps = 41/553 (7%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           +GVS    +F + IN++ + G  E+A+K+F ++ E G+ P V  +N ++D L    R+  
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                  M   GMEP + TY+IL+K L +  R+  AY +L EM  KG  P+ + Y  ++ 
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386

Query: 144 SICKLGQVEEARELA-MRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S  + G + +A E+  +    G+S+    YN LI G CK  + + A  LL EM+  G + 
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  +++++I  LC     +++L  +G+M +R  +P     T+L+ G    G+  +A +LW
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV--------------SVSY---------- 294
            + + +GF+ +    + L+HGLC  G +DEA                VSY          
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566

Query: 295 -----------QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
                      +M +    P+  TYS LI G      +  A Q W+    NG  P+V  Y
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           + M+   C+     +     ++M  +N  PNTV +N  I+  C  GR+  A++L + MK 
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               PN  TY  L+ G+  ++RV+EA  L  E+   G++ N+  Y  ++ G  + G +V+
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
              LL +M  +    + IT+ ++I  Y + G V  A +LL+ +R  G   PD I+Y   +
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG-IVPDSITYKEFI 805

Query: 524 WGICNSGGMQEAF 536
           +G    GG+ EAF
Sbjct: 806 YGYLKQGGVLEAF 818



 Score =  227 bits (578), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 278/538 (51%), Gaps = 8/538 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           AL +F  +   G+ P+    N +L +L+  N F      +  + + G+ P+V+ +   + 
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 281

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGV 165
           A CK  +V+ A KL  +M   G AP+ V++ T++  +   G+ +EA   +E  +  G   
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341

Query: 166 SV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           ++  Y+ L+ GL +  +I +A+++L EM  +G  PNVI Y+ +I S  + G++  ++ I 
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +G +    ++ +L+KGY   G+   A  L   M+  GF  N  +++++I  LCS+
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
              D A+    +M   +  P     + LI G  K G    A ++W + ++ G   +    
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+     +A  + +++    C  + V++NT I G CG  ++D A   LD+M +
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY+ L+ GL  +N+V+EA +   + ++ G+  ++ TY+ ++ G C+A    E
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             +   +M+ +  + + + +N +I AYC+ G+++ A++L + ++  G  +P+  +YTSL+
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLI 700

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G+     ++EA +  ++M  EG+ PN   +  L+   +  LG +  V  L   M +K
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG-YGKLGQMVKVECLLREMHSK 757



 Score =  217 bits (553), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 237/485 (48%), Gaps = 9/485 (1%)

Query: 104 NILLKALCKNNRVDGAY---KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           ++L++  C   + DG Y    +   + NKG  P   +   +++S+ +  + ++  E    
Sbjct: 205 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 264

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GVS    ++   IN  CK  K+EEA  L  +M + G+ PNV+T++T+I  L   G  
Sbjct: 265 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +     +M  RG  P + +++ L+KG     R  +A  +   M ++GF PNV+ Y+ L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I      GS+++A+ +   M         +TY+ LI G+ K G    A ++   M+S G 
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 444

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + N  ++T ++ +LC + MF  A   + +M   N  P      T I GLC  G+   A++
Sbjct: 445 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 504

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  Q      + +  T N LL GL    ++ EAF +  EI   G  ++ V+YNT++ G C
Sbjct: 505 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 564

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               + EAF  L +M+  G K D  T++I+I       KV  AIQ  D  +  G   PD+
Sbjct: 565 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-PDV 623

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +Y+ ++ G C +   +E   +  +M+++ + PN   +N L+R+ +   G L     L +
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA-YCRSGRLSMALELRE 682

Query: 577 IMANK 581
            M +K
Sbjct: 683 DMKHK 687



 Score =  193 bits (490), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 216/475 (45%), Gaps = 43/475 (9%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           + +  +   +R+G A   LK    + + G  P V +YN+++D+ +     +    I   M
Sbjct: 348 ILVKGLTRAKRIGDAYFVLK---EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--------------------- 130
              G+     TYN L+K  CKN + D A +LL EM + G                     
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464

Query: 131 --------------CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVSV----YNAL 171
                          +P     TT++S +CK G+  +A EL  +F   G  V     NAL
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++GLC+  K++EAF +  E++ RG   + ++Y+T+IS  C    ++ +   L +M  RG 
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+ ++++ L+ G     +  EA   W+   R G LP+V  YS +I G C     +E   
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              +M   +  PN   Y+ LI  + ++G L  A ++   M   G SPN   YT ++K + 
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
             +   +A  L E+M  E   PN   +   I G    G++     LL +M      PN  
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           TY  ++ G  R   V EA  L+ E+ + GI  + +TY   ++G  + G V+EAF+
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  151 bits (382), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D     + +M +  +S   G+  ++I+   + G   +AL+++++    G     +  N 
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L    +      I   +   G   +  +YN L+   C   ++D A+  L EM  +G
Sbjct: 524 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 583

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAF 185
             PD  +Y+ ++  +  + +VEEA +      R G    V  Y+ +I+G CK  + EE  
Sbjct: 584 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 643

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               EM+ + + PN + Y+ +I + C  G +  +L +   M  +G +PN  ++TSL+KG 
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 703

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            +  R  EA  L+  M  EG  PNV  Y+ LI G    G M +   +  +M   +  PN 
Sbjct: 704 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 763

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            TY+ +I G+A+ GN+  AS++ N M   G  P+ + Y
Sbjct: 764 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801



 Score =  107 bits (268), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 40/310 (12%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++D     L +M   G+      +  +I     +   E+A++ +   +  G+ P V  
Sbjct: 566 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 625

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y+ ++D      R       +  M    ++PN   YN L++A C++ R+  A +L  +M 
Sbjct: 626 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 685

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           +KG +P++ +YT+++  +  + +VEEA+                               L
Sbjct: 686 HKGISPNSATYTSLIKGMSIISRVEEAK------------------------------LL 715

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM   G++PNV  Y+ +I     +G +     +L +M  +  +PN  ++T ++ GY  
Sbjct: 716 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 775

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   EAS L N M  +G +P+ + Y   I+G    G + EA   S   EEN        
Sbjct: 776 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD--EEN-------- 825

Query: 308 YSALIDGFAK 317
           Y+A+I+G+ K
Sbjct: 826 YAAIIEGWNK 835


>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
           OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
          Length = 907

 Score =  264 bits (674), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 271/578 (46%), Gaps = 43/578 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ +M     S SE    S++   R+ G  E+AL +  R+ +FG+ P + +YN ++D+L 
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +F     ++  M + G+ PN  TY+IL+   C+  ++D A   L EM + G      
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438

Query: 137 SYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y ++++  CK G +  A          +    V  Y +L+ G C + KI +A  L  EM
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +GI P++ T++T++S L   G +  ++ +  +M      PN  ++  +++GY   G  
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +    M  +G +P+  +Y  LIHGLC  G   EA      + + +C  N   Y+ L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCS---------------------------------- 337
           + GF + G L  A  +   M+  G                                    
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678

Query: 338 -PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ V YT M+    +   F +A  + + M  E C PN VT+   I GLC  G V+ A  
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVN-RVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           L  +M+    +PN  TY   LD L +    +++A EL   I K G+  N  TYN ++ G 
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGF 797

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           CR G + EA +L+ +M+ +G   D IT+  +I   C++  V  AI+L + +   G   PD
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG-IRPD 856

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            ++Y +L+ G C +G M +A     +ML +G+ PN  T
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score =  250 bits (638), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 256/527 (48%), Gaps = 9/527 (1%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           +R  GLA   +++F  +   G++P V IY  ++ +L      S    + ++M+  G + N
Sbjct: 205 FRHFGLA---MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE--- 156
           +  YN+L+  LCK  +V  A  +  ++  K   PD V+Y T+V  +CK+ + E   E   
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321

Query: 157 --LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             L +RF    +  ++L+ GL K  KIEEA  L+  +VD G+ PN+  Y+ +I SLC   
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
               +  +  +M   G  PN  +++ L+  +   G+   A      M+  G   +V  Y+
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +LI+G C  G +  A     +M      P V TY++L+ G+   G +  A ++++ M   
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G +P++  +T ++  L +  +   A  L  +MA  N  PN VT+N  I+G C  G +  A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            + L +M +   +P+  +Y  L+ GL    +  EA   V  + K   +LN + Y  +LHG
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            CR G + EA  +  +M+  G  LD + + ++I    K         LL  +   G   P
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG-LKP 680

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D + YTS++     +G  +EAF     M+NEG  PN  T+  ++  L
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727



 Score =  233 bits (594), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 235/467 (50%), Gaps = 8/467 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P V T + LL  L K      A +L  +M + G  PD   YT ++ S+C+L  +  A+E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 158 -AMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
            A    +G  V    YN LI+GLCK+ K+ EA  +  ++  + + P+V+TY T++  LC 
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           V   E  L ++ +M     +P+  + +SL++G    G+  EA +L  R++  G  PN+  
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI  LC      EA  +  +M +    PN  TYS LID F + G L  A      M+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   +V  Y  ++   C+      A   + +M  +   P  VT+ + + G C  G+++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++L  +M      P+I T+  LL GL R   +++A +L  E+ +  ++ N VTYN ++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGE 511
            G C  G + +AF+ L +M  +G   D  ++  +I+  C  G+ + A   +D + +G  E
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            N   I YT LL G C  G ++EA    Q+M+  G+  +   + VL+
Sbjct: 610 LNE--ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654



 Score =  231 bits (590), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 260/543 (47%), Gaps = 6/543 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M   G+     ++  VI S   +    +A +M   +   G    +  YN ++D L 
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      I  ++    ++P+V TY  L+  LCK    +   +++ EM     +P   
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           + +++V  + K G++EEA  L  R    GVS    VYNALI+ LCK  K  EA  L   M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PN +TYS +I   C  G ++T+L  LG+M   G   +++ + SL+ G+   G  
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A      MI +   P VV Y++L+ G CS G +++A+ + ++M      P++ T++ L
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  +AG +  A +++N M      PN V Y  M++  C+     +A   +++M  +  
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+T ++   I GLC  G+   A   +D + +  C  N   Y  LL G  R  +++EA  
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  E+ + G+ L++V Y  ++ G  +       F LL +M   G K D + +  +I A  
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G    A  + D +   G   P+ ++YT+++ G+C +G + EA +   KM      PN 
Sbjct: 694 KTGDFKEAFGIWDLMINEG-CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752

Query: 552 ATW 554
            T+
Sbjct: 753 VTY 755



 Score =  199 bits (505), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 207/443 (46%), Gaps = 40/443 (9%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I   +  + +M  + +  +   + S++  Y   G   +AL++++ +   G+ P++  + 
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L           +++ M    ++PN  TYN++++  C+   +  A++ L EM  K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEA 184
           G  PD  SY  ++  +C  GQ  EA+        G        Y  L++G C+E K+EEA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  EMV RG+D +++ Y  +I       + +   G+L +M  RG  P+   +TS++  
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   EA  +W+ MI EG +PN V Y+ +I+GLC  G ++EA  +  +M+  S  PN
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751

Query: 305 -----------------------------------VTTYSALIDGFAKAGNLLGASQIWN 329
                                                TY+ LI GF + G +  AS++  
Sbjct: 752 QVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RMI +G SP+ + YT M+  LC+ N   +A  L   M  +   P+ V +NT I G C  G
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871

Query: 390 RVDWAMKLLDQMKQYECLPNITT 412
            +  A +L ++M +   +PN  T
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKT 894



 Score =  155 bits (392), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 188/417 (45%), Gaps = 48/417 (11%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K +I+    L  +M  +G++ S   F ++++   R GL   A+K+F  + E+ +KP    
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN +++    E   S        M   G+ P+ ++Y  L+  LC   +   A K+ V+  
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGL 603

Query: 128 NKG-CAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV----YNALINGLCKE 178
           +KG C  + + YT ++   C+ G++EEA    +E+  R   GV +    Y  LI+G  K 
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR---GVDLDLVCYGVLIDGSLKH 660

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              +  F LL EM DRG+ P+ + Y+++I +    G+ + + GI   M   GC PN  ++
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720

Query: 239 TSLLKGYLLGGRTHEASDLWNRM-----------------------------------IR 263
           T+++ G    G  +EA  L ++M                                   I 
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G L N   Y+ LI G C  G ++EA  +  +M  +   P+  TY+ +I+   +  ++  
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           A ++WN M   G  P+ VAY  ++   C      +A  L  +M  +   PN  T  T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score =  137 bits (346), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 163/361 (45%), Gaps = 37/361 (10%)

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           F  L++ Y+   R  +   ++  MI +   LP V   S L+HGL        A+ +   M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
                 P+V  Y+ +I    +  +L  A ++   M + GC  N+V Y  ++  LC+    
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC---------------------------- 388
            +A  + + +A ++  P+ VT+ T + GLC                              
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 389 -------GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
                  G+++ A+ L+ ++  +   PN+  YN L+D L +  +  EA  L   + K G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N VTY+ ++   CR G +  A   LG+M+  G KL    +N +I  +CK G ++ A  
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +  +    +  P +++YTSL+ G C+ G + +A     +M  +GI P+  T+  L+  L
Sbjct: 459 FMAEMI-NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517

Query: 562 F 562
           F
Sbjct: 518 F 518



 Score = 76.3 bits (186), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 7/192 (3%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           EG   +E  + +VIN   + G   +A  +  +++     P    Y   LD +L +    M
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDM 769

Query: 84  INPI-YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
              +   N    G+  N  TYN+L++  C+  R++ A +L+  M   G +PD ++YTT++
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829

Query: 143 SSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           + +C+   V++A EL       G+      YN LI+G C   ++ +A  L  EM+ +G+ 
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889

Query: 198 PNVITYSTIISS 209
           PN  T  T  S+
Sbjct: 890 PNNKTSRTTTSN 901


>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
           OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
          Length = 687

 Score =  263 bits (673), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 173/638 (27%), Positives = 302/638 (47%), Gaps = 79/638 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           ++ +L E   ++ V  +++ ++ +   C E V +SVI +Y +  + +QAL +F R+RE F
Sbjct: 49  ILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIF 108

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P ++ YN +L+A +   ++  +  +++  +  G+ PN+ TYN+L+K  CK    + A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALING 174
              L  M  +G  PD  SY+T+++ + K G++++A EL            V+ YN LI+G
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228

Query: 175 LCKE--HKIEEAFWLLCEMVDRGIDPNV-------------------------------- 200
             KE  HK     W    + D  + PNV                                
Sbjct: 229 FLKEKDHKTAMELWDRL-LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE 287

Query: 201 ---ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
               TYS++I  LCD GNV+ +  +  ++  R  + ++ ++ ++L G+   G+  E+ +L
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           W R++      N+V+Y+ LI GL  NG +DEA  +   M       + TTY   I G   
Sbjct: 348 W-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G +  A  +   + S+G   +V AY  ++  LC+     +A +L+++M+      N+  
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            N  I GL    R+  A   L +M +  C P + +YN L+ GL +  +  EA   V E+ 
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G + ++ TY+ +L G+CR   +  A +L  + L  G + D +  NI+I+  C  GK++
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586

Query: 498 NAIQLL--------------------------DRIRGGGEW--------NPDIISYTSLL 523
           +A+ ++                          D  R    W         PDIISY +++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C   G+  A  +     N GI P   TWN+LVR++
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684



 Score =  133 bits (335), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 151/292 (51%), Gaps = 4/292 (1%)

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++I     N   D+A+ V  +M E   C P + +Y+ L++ F +A   +    ++    +
Sbjct: 83  SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G +PN+  Y  ++K+ C+   F +A   ++ M  E   P+  +++T I  L   G++D 
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE-IEKCGIQLNIVTYNTIL 452
           A++L D+M +    P++T YN L+DG L+    K A EL    +E   +  N+ T+N ++
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+ + G V +  ++  +M     + D  T++ +I+  C  G V+ A  + + +    + 
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL-DERKA 321

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + D+++Y ++L G C  G ++E+ + L +++      N  ++N+L++ L  N
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKES-LELWRIMEHKNSVNIVSYNILIKGLLEN 372



 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 20/217 (9%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC-------LPNITTY--NELLDGLLRV- 423
           + V ++  ++ L     V+   ++++ ++  EC       L  I TY  N + D  L V 
Sbjct: 42  SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R++E F         G +  I +YNT+L+    A   V+   L       G   +  T+
Sbjct: 102 KRMREIF---------GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTY 152

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N++I   CK+ +   A   LD +   G + PD+ SY++++  +  +G + +A     +M 
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             G+ P+   +N+L+        H   + + D ++ +
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248



 Score = 37.7 bits (86), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 7/157 (4%)

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELV-TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            P   +   +L  L      + AF L  +     G   + V Y+ IL  +    MV    
Sbjct: 4   FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVS 63

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +++  +  +  K D      +I  Y K    + A+ +  R+R      P I SY +LL  
Sbjct: 64  RIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNA 123

Query: 526 ICNSG---GMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              +     ++  F Y +     G+ PN  T+NVL++
Sbjct: 124 FVEAKQWVKVESLFAYFE---TAGVAPNLQTYNVLIK 157


>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
           OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
          Length = 871

 Score =  263 bits (672), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 281/550 (51%), Gaps = 7/550 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++Q M+      +   + ++I ++  V  ++  L +F +++E G +PTV ++  ++    
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   MK   ++ ++  YN+ + +  K  +VD A+K   E+   G  PD V
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +YT+++  +CK  +++EA E+         V     YN +I G     K +EA+ LL   
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G  P+VI Y+ I++ L  +G V+ +L +  +M  +   PN+ ++  L+      G+ 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L + M + G  PNV   + ++  LC +  +DEA ++  +M+   C P+  T+ +L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A +++ +M+ + C  N + YT ++K    +      H + + M  +NC
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+    NT++  +   G  +    + +++K    +P+  +Y+ L+ GL++     E +E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   +++ G  L+   YN ++ G C+ G V +A+QLL +M  +G +   +T+  +I    
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  +++ A  L +  +       +++ Y+SL+ G    G + EA++ L++++ +G+ PN 
Sbjct: 634 KIDRLDEAYMLFEEAK-SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692

Query: 552 ATWNVLVRSL 561
            TWN L+ +L
Sbjct: 693 YTWNSLLDAL 702



 Score =  253 bits (646), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 291/586 (49%), Gaps = 9/586 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    ++  +D    LL +MK   +     ++   I+S+ +VG  + A K F+ I   G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    Y  ++  L   NR      ++ +++++   P  + YN ++       + D AY
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            LL     KG  P  ++Y  I++ + K+G+V+EA     E+       +S YN LI+ LC
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLC 388

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +  K++ AF L   M   G+ PNV T + ++  LC    ++ +  +  +M  + C P+  
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F SL+ G    GR  +A  ++ +M+      N + Y++LI    ++G  ++   +   M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
              +C P++   +  +D   KAG       ++  + +    P+  +Y+ ++  L +    
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           ++ + L   M  + C  +T  +N  I G C CG+V+ A +LL++MK     P + TY  +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +++R+ EA+ L  E +   I+LN+V Y++++ G  + G + EA+ +L +++ +G 
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+N ++ A  K  ++N A+     ++   +  P+ ++Y  L+ G+C      +AF
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMK-ELKCTPNQVTYGILINGLCKVRKFNKAF 747

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFS--NLGHLGPVYILDDIMAN 580
           ++ Q+M  +G+ P+  ++  ++  L    N+   G ++  D   AN
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF--DRFKAN 791



 Score =  171 bits (434), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 197/403 (48%), Gaps = 2/403 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           FG  V+    ++ G  K +K+ E + ++  M      P    Y+T+I +   V + +  L
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM   G  P +H FT+L++G+   GR   A  L + M       ++V Y+  I   
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              G +D A    +++E N   P+  TY+++I    KA  L  A +++  +  N   P  
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
            AY  M+        F +A+SL+E+   +   P+ + +N  +  L   G+VD A+K+ ++
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           MK+ +  PN++TYN L+D L R  ++  AFEL   ++K G+  N+ T N ++  +C++  
Sbjct: 369 MKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + EA  +  +M  +    D ITF  +I    K G+V++A ++ +++    +   + I YT
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML-DSDCRTNSIVYT 486

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           SL+    N G  ++     + M+N+   P+    N  +  +F 
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529



 Score =  164 bits (415), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 193/397 (48%), Gaps = 2/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN+L+  + +    +    +L EM   G  P+V T   ++        +     ++  M 
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
                P   ++T+L+  +     +     L+ +M   G+ P V  ++TLI G    G +D
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+S+  +M+ +S   ++  Y+  ID F K G +  A + ++ + +NG  P+ V YT M+
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
            VLC+ N   +A  + E +      P T  +NT I G    G+ D A  LL++ +    +
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++  YN +L  L ++ +V EA ++  E++K     N+ TYN ++  +CRAG +  AF+L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFEL 399

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M   G   +  T NI++   CK  K++ A  + + +       PD I++ SL+ G+ 
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLG 458

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             G + +A+   +KML+     N   +  L+++ F++
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495



 Score =  162 bits (411), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/519 (23%), Positives = 228/519 (43%), Gaps = 41/519 (7%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--- 158
           +YN LL  + +    D   ++L EM   G  P   +   +V    K  ++ E  ++    
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 159 --MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              +F    S Y  LI      +  +    L  +M + G +P V  ++T+I      G V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +++L +L +M     + +I  +   +  +   G+   A   ++ +   G  P+ V Y+++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC    +DEAV +   +E+N   P    Y+ +I G+  AG    A  +  R  + G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+V+AY C++  L +     +A  + E+M  ++  PN  T+N  I  LC  G++D A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L D M++    PN+ T N ++D L +  ++ EA  +  E++      + +T+ +++ G+ 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA---------------IQ 501
           + G V +A+++  KML    + ++I +  +I  +   G+  +                +Q
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518

Query: 502 LL----DRIRGGGE---------------WNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           LL    D +   GE               + PD  SY+ L+ G+  +G   E +     M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             +G   +   +N+++   F   G +   Y L + M  K
Sbjct: 579 KEQGCVLDTRAYNIVIDG-FCKCGKVNKAYQLLEEMKTK 616



 Score =  142 bits (357), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 168/335 (50%), Gaps = 9/335 (2%)

Query: 34  ISVINSYR----RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           + ++N+Y     + G  E+   MF  I+     P  + Y+ ++  L+     +    ++ 
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           +MK  G   +   YNI++   CK  +V+ AY+LL EM  KG  P  V+Y +++  + K+ 
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

Query: 150 QVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           +++EA  L     + R    V +Y++LI+G  K  +I+EA+ +L E++ +G+ PN+ T++
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +++ +L     +  +L     M    C PN  ++  L+ G     + ++A   W  M ++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+ ++Y+T+I GL   G++ EA ++  + + N   P+   Y+A+I+G +     + A
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
             ++      G   +      ++  L +N+   QA
Sbjct: 817 FSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  114 bits (286), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 9/289 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   MK +G       +  VI+ + + G   +A ++   ++  G +PTV  Y  ++D L 
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +R      ++   K   +E NV  Y+ L+    K  R+D AY +L E+  KG  P+  
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693

Query: 137 SYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           ++ +++ ++ K  ++ EA       +EL  +       Y  LINGLCK  K  +AF    
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKEL--KCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  +G+ P+ I+Y+T+IS L   GN+  +  +  +    G  P+   + ++++G   G 
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           R  +A  L+    R G   +      L+  L  N  +++A  V   + E
Sbjct: 812 RAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860



 Score = 96.3 bits (238), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 5/201 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++ K + +  +  ++ S+I+ + +VG  ++A  +   + + G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P +  +N +LDAL+     +     + +MK     PN  TY IL+  LCK  + + A+
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
               EM  +G  P  +SYTT++S + K G + EA  L  RF +   V     YNA+I GL
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807

Query: 176 CKEHKIEEAFWLLCEMVDRGI 196
              ++  +AF L  E   RG+
Sbjct: 808 SNGNRAMDAFSLFEETRRRGL 828


>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
           OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
          Length = 577

 Score =  262 bits (670), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 257/499 (51%), Gaps = 12/499 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A+    +F ++  +   M+R G+  N++TYNIL+   C+ +++  A  L
Sbjct: 83  PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+ +++++  C   ++ +A  L      M +      +  LI+GL  
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV RG  PN++TY  +++ LC  G+++ +  +L +M       N+  
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++++          +A +L+  M  +G  PNV+ YS+LI  LC+     +A  +   M 
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PNV T++ALID F K G L+ A ++++ MI     P++  Y+ ++   C ++   
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  + E M  ++C PN VT+NT I G C   R+D  ++L  +M Q   + N  TY  L+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA---FQLLGKMLIE 474
            G  +      A  +  ++   G+  NI+TYNT+L G+C+ G + +A   F+ L +  +E
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            T     T+NI+I   CK GKV +   L   +   G   PD+I Y +++ G C  G  +E
Sbjct: 503 PT---IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIIYNTMISGFCRKGLKEE 558

Query: 535 AFIYLQKMLNEGICPNFAT 553
           A    +KM  +G  P+  T
Sbjct: 559 ADALFRKMREDGPLPDSGT 577



 Score =  254 bits (649), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 257/487 (52%), Gaps = 5/487 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L ++M+  G+S +   +  +IN + R      AL +  ++ + G
Sbjct: 91  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P++   + +L+      R S    +   M   G  P+  T+  L+  L  +N+   A 
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  +GC P+ V+Y  +V+ +CK G ++ A  L     A +  + V +Y+ +I+ L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK    ++A  L  EM ++G+ PNVITYS++IS LC+      +  +L  M  R  NPN+
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L+  ++  G+  EA  L++ MI+    P++  YS+LI+G C +  +DEA  +   
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PNV TY+ LI+GF KA  +    +++  M   G   N V YT ++    Q   
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +   PN +T+NT + GLC  G+++ AM + + +++ +  P I TYN 
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V++ ++L   +   G++ +++ YNT++ G CR G+  EA  L  KM  +G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570

Query: 476 TKLDAIT 482
              D+ T
Sbjct: 571 PLPDSGT 577



 Score =  221 bits (562), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 235/464 (50%), Gaps = 6/464 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           Y  +L+    + ++D A  L   M      P    +  ++S+I K+ + +    L  +  
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 163 S-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
             G+S     YN LIN  C+  +I  A  LL +M+  G +P+++T S++++  C    + 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ ++ QM   G  P+  +FT+L+ G  L  +  EA  L +RM++ G  PN+V Y  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +GLC  G +D A ++  +ME      NV  YS +ID   K  +   A  ++  M + G  
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNV+ Y+ ++  LC    +  A  L+  M      PN VTFN  I      G++  A KL
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            D+M +    P+I TY+ L++G    +R+ EA  +   +       N+VTYNT+++G C+
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           A  + E  +L  +M   G   + +T+  +I+ + +    +NA  +  ++   G  +P+I+
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIM 471

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Y +LL G+C +G +++A +  + +    + P   T+N+++  +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515



 Score =  207 bits (527), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 213/397 (53%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M   GI  N+ TY+ +I+  C    +  +L +LG+M 
Sbjct: 88  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY  G R  +A  L ++M+  G+ P+ + ++TLIHGL  +    
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M +  C PN+ TY  +++G  K G++  A  + N+M +     NVV Y+ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L  +M  +   PN +T+++ I  LC   R   A +LL  M + +  
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+N L+D  ++  ++ EA +L  E+ K  I  +I TY+++++G C    + EA  +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    + +T+N +I  +CK  +++  ++L   +   G    + ++YT+L+ G  
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG-NTVTYTTLIHGFF 446

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +     A +  ++M+++G+ PN  T+N L+  L  N
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483



 Score =  168 bits (425), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 206/436 (47%), Gaps = 14/436 (3%)

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
           GN   AP ++     +  +C  G+          F SG   Y  ++       K+++A  
Sbjct: 25  GNPRIAPSSID----LCGMCYWGRA---------FSSGSGDYREILRNGLHSMKLDDAIG 71

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L   MV     P++  ++ ++S++  +   +  + +  +M   G + N++++  L+  + 
Sbjct: 72  LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              +   A  L  +M++ G+ P++V  S+L++G C    + +AV++  QM E    P+  
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T++ LI G         A  + +RM+  GC PN+V Y  +V  LC+      A +L+ KM
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                  N V ++T I  LC     D A+ L  +M+     PN+ TY+ L+  L    R 
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            +A  L++++ +  I  N+VT+N ++    + G +VEA +L  +M+      D  T++ +
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I  +C   +++ A  + + +    +  P++++Y +L+ G C +  + E     ++M   G
Sbjct: 372 INGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430

Query: 547 ICPNFATWNVLVRSLF 562
           +  N  T+  L+   F
Sbjct: 431 LVGNTVTYTTLIHGFF 446


>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
           OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
          Length = 729

 Score =  261 bits (667), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 280/559 (50%), Gaps = 7/559 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           ++ VF  +I +Y +     +A + F  +R  G   ++   N ++ +L+      +   +Y
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             + R G+  NV+T NI++ ALCK+ +++     L ++  KG  PD V+Y T++S+    
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 149 GQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G +EEA EL  AM    F  GV  YN +INGLCK  K E A  +  EM+  G+ P+  TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            +++   C  G+V  +  +   M  R   P++  F+S++  +   G   +A   +N +  
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G +P+ V Y+ LI G C  G +  A+++  +M +  C  +V TY+ ++ G  K   L  
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++N M      P+    T ++   C+      A  L +KM  +    + VT+NT + 
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G    G +D A ++   M   E LP   +Y+ L++ L     + EAF +  E+    I+ 
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            ++  N+++ G CR+G   +    L KM+ EG   D I++N +IY + ++  ++ A  L+
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643

Query: 504 DRI-RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++    G   PD+ +Y S+L G C    M+EA + L+KM+  G+ P+ +T+  ++    
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703

Query: 563 SNLGHLGPVYILDDIMANK 581
           S   +L   + + D M  +
Sbjct: 704 SQ-DNLTEAFRIHDEMLQR 721



 Score =  228 bits (580), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 262/537 (48%), Gaps = 43/537 (8%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           ++ +G + S     ++I S  R+G  E A  ++  I   G+   V   N +++AL  + +
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
              +    S ++  G+ P++ TYN L+ A      ++ A++L+  M  KG +P   +Y T
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310

Query: 141 IVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++ +CK G+ E A+E+ A    SG+S     Y +L+   CK+  + E   +  +M  R 
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+++ +S+++S     GN++ +L     +   G  P+   +T L++GY   G    A 
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP------------ 303
           +L N M+++G   +VV Y+T++HGLC    + EA  +  +M E +  P            
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490

Query: 304 -----------------------NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                                  +V TY+ L+DGF K G++  A +IW  M+S    P  
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           ++Y+ +V  LC      +A  + ++M  +N  P  +  N+ IKG C  G        L++
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--EKCGIQLNIVTYNTILHGVCRA 458
           M     +P+  +YN L+ G +R   + +AF LV ++  E+ G+  ++ TYN+ILHG CR 
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
             + EA  +L KM+  G   D  T+  +I  +  Q  +  A ++ D +   G ++PD
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG-FSPD 726



 Score =  220 bits (561), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 259/486 (53%), Gaps = 10/486 (2%)

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           +R  ++N + S     G   +VF  ++L++   +  ++  A++    + +KG      + 
Sbjct: 146 SRLEIVNSLDSTFSNCGSNDSVF--DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC 203

Query: 139 TTIVSSICKLGQVEEA----RELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMV 192
             ++ S+ ++G VE A    +E++ R G G++VY  N ++N LCK+ K+E+    L ++ 
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEIS-RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           ++G+ P+++TY+T+IS+    G +E +  ++  M  +G +P ++++ +++ G    G+  
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A +++  M+R G  P+   Y +L+   C  G + E   V   M      P++  +S+++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             F ++GNL  A   +N +   G  P+ V YT +++  C+  M   A +L  +M  + C 
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            + VT+NT + GLC    +  A KL ++M +    P+  T   L+DG  ++  ++ A EL
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++++  I+L++VTYNT+L G  + G +  A ++   M+ +      I+++I++ A C 
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +G +  A ++ D +       P ++   S++ G C SG   +   +L+KM++EG  P+  
Sbjct: 563 KGHLAEAFRVWDEMISKN-IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621

Query: 553 TWNVLV 558
           ++N L+
Sbjct: 622 SYNTLI 627



 Score =  203 bits (517), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 239/489 (48%), Gaps = 13/489 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  +++ V   L Q++ +GV      + ++I++Y   GL E+A ++   +   G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +++ L    ++     +++ M R G+ P+  TY  LL   CK   V    
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
           K+  +M ++   PD V +++++S   + G +++A    M F S           +Y  LI
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA---LMYFNSVKEAGLIPDNVIYTILI 417

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G C++  I  A  L  EM+ +G   +V+TY+TI+  LC    +  +  +  +M  R   
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+ ++ T L+ G+   G    A +L+ +M  +    +VV Y+TL+ G    G +D A  +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P   +YS L++     G+L  A ++W+ MIS    P V+    M+K  C+
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE--CLPNI 410
           +       S +EKM  E   P+ +++NT I G      +  A  L+ +M++ +   +P++
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN +L G  R N++KEA  ++ ++ + G+  +  TY  +++G      + EAF++  +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717

Query: 471 MLIEGTKLD 479
           ML  G   D
Sbjct: 718 MLQRGFSPD 726



 Score =  179 bits (454), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 204/420 (48%), Gaps = 2/420 (0%)

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
           GS  SV++ LI    +  K+ EA      +  +G   ++   + +I SL  +G VE + G
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  ++   G   N+++   ++      G+  +     +++  +G  P++V Y+TLI    
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           S G M+EA  +   M      P V TY+ +I+G  K G    A +++  M+ +G SP+  
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++   C+     +   +   M   +  P+ V F++ +      G +D A+   + +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           K+   +P+   Y  L+ G  R   +  A  L  E+ + G  +++VTYNTILHG+C+  M+
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA +L  +M       D+ T  I+I  +CK G + NA++L  +++       D+++Y +
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK-EKRIRLDVVTYNT 520

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           LL G    G +  A      M+++ I P   ++++LV +L S  GHL   + + D M +K
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK-GHLAEAFRVWDEMISK 579


>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
           SV=1
          Length = 644

 Score =  261 bits (667), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 267/529 (50%), Gaps = 12/529 (2%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+ A+ +F  + +    PTV  +N +  A+    ++ ++  +   M+  G+  +++T +I
Sbjct: 69  ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---- 161
           ++   C+  ++  A+  + ++   G  PD V + T+++ +C   +V EA EL  R     
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 162 -GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
               +   N L+NGLC   K+ +A  L+  MV+ G  PN +TY  +++ +C  G    ++
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L +M  R    +   ++ ++ G    G    A +L+N M  +GF  +++ Y+TLI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C+ G  D+   +   M +    PNV T+S LID F K G L  A Q+   M+  G +PN 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + Y  ++   C+ N   +A  +++ M  + C P+ +TFN  I G C   R+D  ++L  +
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M     + N  TYN L+ G  +  +++ A +L  E+    ++ +IV+Y  +L G+C  G 
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A ++ GK+     +LD   + III+  C   KV++A  L   +   G    D  +Y 
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG-VKLDARAYN 547

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
            ++  +C    + +A I  +KM  EG  P+  T+N+L+R+      HLG
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA------HLG 590



 Score =  257 bits (657), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 270/560 (48%), Gaps = 33/560 (5%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L +QM+ +G++ S      +IN + R      A     +I + G +P   I+N +L+
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L  E R S    +   M   G +P + T N L+  LC N +V  A  L+  M   G  P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           + V+Y  +++ +CK GQ   A E                              LL +M +
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAME------------------------------LLRKMEE 256

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I  + + YS II  LC  G+++ +  +  +M ++G   +I ++ +L+ G+   GR  +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
            + L   MI+    PNVV +S LI      G + EA  +  +M +    PN  TY++LID
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF K   L  A Q+ + MIS GC P+++ +  ++   C+ N       L  +M+      
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           NTVT+NT ++G C  G+++ A KL  +M      P+I +Y  LLDGL     +++A E+ 
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            +IEK  ++L+I  Y  I+HG+C A  V +A+ L   + ++G KLDA  +NI+I   C++
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             ++ A  L  ++   G   PD ++Y  L+           A   +++M + G   + +T
Sbjct: 557 DSLSKADILFRKMTEEGHA-PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615

Query: 554 WNVLVRSLFSNLGHLGPVYI 573
             +++  L S  G L   ++
Sbjct: 616 VKMVINMLSS--GELDKSFL 633



 Score =  180 bits (457), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 206/420 (49%), Gaps = 36/420 (8%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K ++A  L  +M+     P VI ++ + S++      E  L +  QM  +G   +I++ +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++  +    +   A     ++++ G+ P+ V ++TL++GLC    + EA+ +  +M E 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P + T + L++G    G +  A  + +RM+  G  PN V Y  ++ V+C++     A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 360 HSLIEKMAFENC-----------------------------------PPNTVTFNTFIKG 384
             L+ KM   N                                      + +T+NT I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  GR D   KLL  M + +  PN+ T++ L+D  ++  +++EA +L+ E+ + GI  N
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            +TYN+++ G C+   + EA Q++  M+ +G   D +TFNI+I  YCK  ++++ ++L  
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +   G    + ++Y +L+ G C SG ++ A    Q+M++  + P+  ++ +L+  L  N
Sbjct: 428 EMSLRGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486



 Score =  160 bits (404), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 179/346 (51%), Gaps = 4/346 (1%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+   L   L+G +  +A DL+  MI+   LP V+ ++ L   +      +  +++  QM
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           E      ++ T S +I+ F +   L  A     +++  G  P+ V +  ++  LC     
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L+++M      P  +T NT + GLC  G+V  A+ L+D+M +    PN  TY  +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L+ + +  +   A EL+ ++E+  I+L+ V Y+ I+ G+C+ G +  AF L  +M I+G 
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           K D IT+N +I  +C  G+ ++  +LL D I+   + +P++++++ L+      G ++EA
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIK--RKISPNVVTFSVLIDSFVKEGKLREA 352

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
              L++M+  GI PN  T+N L+   F     L     + D+M +K
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDG-FCKENRLEEAIQMVDLMISK 397



 Score =  147 bits (372), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 176/355 (49%), Gaps = 5/355 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G       + ++I  +   G  +   K+   + +  
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D+ + E +    + +   M + G+ PN  TYN L+   CK NR++ A 
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           +++  M +KGC PD +++  +++  CK  ++++     RE+++R   +    YN L+ G 
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+E A  L  EMV R + P++++Y  ++  LCD G +E +L I G++       +I
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A DL+  +  +G   +  AY+ +I  LC   S+ +A  +  +
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           M E    P+  TY+ LI       +   A+++   M S+G   +V     ++ +L
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623


>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
           OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
          Length = 621

 Score =  260 bits (665), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 288/588 (48%), Gaps = 53/588 (9%)

Query: 26  VSCSEGVFISVIN-----SYR---RVGLAE----QALKMFYRIREFGLKPTVKIYNHILD 73
           +SC   VF SV +     SYR   R G+ +     A+ +F  +     +P +  ++ +  
Sbjct: 21  LSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFS 80

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            +    ++ ++  +   M+  G+  N++T +I++   C+  ++  A+  + ++   G  P
Sbjct: 81  VVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLL 188
           D V+++T+++ +C  G+V EA EL  R         +   NAL+NGLC   K+ +A  L+
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200

Query: 189 CEMVDRGIDPNVIT-----------------------------------YSTIISSLCDV 213
             MV+ G  PN +T                                   YS II  LC  
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G+++ +  +  +M ++G   +I  +T+L++G+   GR  + + L   MI+    P+VVA+
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S LI      G + EA  +  +M +    P+  TY++LIDGF K   L  A+ + + M+S
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            GC PN+  +  ++   C+ N+      L  KM+      +TVT+NT I+G C  G+++ 
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +L  +M      P+I +Y  LLDGL      ++A E+  +IEK  ++L+I  YN I+H
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C A  V +A+ L   + ++G K D  T+NI+I   CK+G ++ A  L  ++   G  +
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH-S 559

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P+  +Y  L+      G   ++   ++++   G   + +T  ++V  L
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607



 Score =  235 bits (600), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 270/533 (50%), Gaps = 7/533 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D V  L +QM+++G++ +      +IN   R      A     +I + G +P    ++
Sbjct: 87  QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  E R S    +   M   G +P + T N L+  LC N +V  A  L+  M   
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  P+ V+Y  ++  +CK GQ   A EL  +            Y+ +I+GLCK+  ++ A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EM  +G   ++I Y+T+I   C  G  +    +L  M  R   P++ +F++L+  
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           ++  G+  EA +L   MI+ G  P+ V Y++LI G C    +D+A  +   M    C PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ LI+G+ KA  +    +++ +M   G   + V Y  +++  C+      A  L +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P+ V++   + GLC  G  + A+++ +++++ +   +I  YN ++ G+   +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +V +A++L   +   G++ ++ TYN ++ G+C+ G + EA  L  KM  +G   +  T+N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           I+I A+  +G    + +L++ I+  G ++ D  S   ++  + + G ++++F+
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCG-FSVD-ASTVKMVVDMLSDGRLKKSFL 617



 Score =  149 bits (375), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 172/360 (47%), Gaps = 5/360 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G      ++ ++I  +   G  +   K+   + +  
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D  + E +      ++  M + G+ P+  TY  L+   CK N++D A 
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            +L  M +KGC P+  ++  +++  CK   +++  EL  +       +    YN LI G 
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+E A  L  EMV R + P++++Y  ++  LCD G  E +L I  ++       +I
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A DL+  +  +G  P+V  Y+ +I GLC  GS+ EA  +  +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE+   PN  TY+ LI      G+   ++++   +   G S +      +V +L    +
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612


>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
           SV=1
          Length = 602

 Score =  255 bits (652), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 240/455 (52%), Gaps = 5/455 (1%)

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGS-GVS 166
           C++     +  LL  M  KG  PD +  T ++     L  + +A    E+  +FG   V 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNALING CK ++I++A  +L  M  +   P+ +TY+ +I SLC  G ++ +L +L Q+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
               C P + ++T L++  +L G   EA  L + M+  G  P++  Y+T+I G+C  G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A  +   +E   C P+V +Y+ L+      G      ++  +M S  C PNVV Y+ +
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC++    +A +L++ M  +   P+  +++  I   C  GR+D A++ L+ M    C
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           LP+I  YN +L  L +  +  +A E+  ++ + G   N  +YNT+   +  +G  + A  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           ++ +M+  G   D IT+N +I   C++G V+ A +LL  +R   E++P +++Y  +L G 
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR-SCEFHPSVVTYNIVLLGF 518

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C +  +++A   L+ M+  G  PN  T+ VL+  +
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  223 bits (568), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 210/407 (51%), Gaps = 5/407 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN + ++   + A ++  R+R     P    YN ++ +L +  +  +   + + +  D
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
             +P V TY IL++A      VD A KL+ EM ++G  PD  +Y TI+  +CK G V+ A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282

Query: 155 RELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            E+            V  YN L+  L  + K EE   L+ +M     DPNV+TYS +I++
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G +E ++ +L  M  +G  P+ +S+  L+  +   GR   A +    MI +G LP+
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+T++  LC NG  D+A+ +  ++ E  C PN ++Y+ +      +G+ + A  +  
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+SNG  P+ + Y  M+  LC+  M  +A  L+  M      P+ VT+N  + G C   
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           R++ A+ +L+ M    C PN TTY  L++G+       EA EL  ++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  214 bits (545), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 239/472 (50%), Gaps = 10/472 (2%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL+ M  +G +    +   +I  +  +    +A+++   + +FG +P V  YN +++  
Sbjct: 110 HLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGF 168

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              NR      +   M+     P+  TYNI++ +LC   ++D A K+L ++ +  C P  
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228

Query: 136 VSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++YT ++ +    G V+EA +L     +      +  YN +I G+CKE  ++ AF ++  
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           +  +G +P+VI+Y+ ++ +L + G  E    ++ +MF   C+PN+ +++ L+      G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L   M  +G  P+  +Y  LI   C  G +D A+     M  + C P++  Y+ 
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++    K G    A +I+ ++   GCSPN  +Y  M   L  +    +A  +I +M    
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ +T+N+ I  LC  G VD A +LL  M+  E  P++ TYN +L G  + +R+++A 
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            ++  +   G + N  TY  ++ G+  AG   EA +L   ++    ++DAI+
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV----RIDAIS 576



 Score =  191 bits (484), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 205/377 (54%), Gaps = 6/377 (1%)

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I    C  GN   SL +L  M  +G NP++   T L+KG+       +A  +   + + G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+V AY+ LI+G C    +D+A  V  +M      P+  TY+ +I      G L  A 
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ N+++S+ C P V+ YT +++         +A  L+++M      P+  T+NT I+G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--EKCGIQL 443
           C  G VD A +++  ++   C P++ +YN LL  LL   + +E  +L+T++  EKC    
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC--DP 331

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+VTY+ ++  +CR G + EA  LL  M  +G   DA +++ +I A+C++G+++ AI+ L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + +   G   PDI++Y ++L  +C +G   +A     K+   G  PN +++N +  +L+S
Sbjct: 392 ETMISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450

Query: 564 NLGHLGPVYILDDIMAN 580
           +   +  ++++ ++M+N
Sbjct: 451 SGDKIRALHMILEMMSN 467



 Score =  178 bits (451), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 203/403 (50%), Gaps = 5/403 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    +L +M+ +  S     +  +I S    G  + ALK+  ++     +PTV  Y 
Sbjct: 173 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYT 232

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A + E        +   M   G++P++FTYN +++ +CK   VD A++++  +  K
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC PD +SY  ++ ++   G+ EE  +L  +  S      V  Y+ LI  LC++ KIEEA
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M ++G+ P+  +Y  +I++ C  G ++ ++  L  M   GC P+I ++ ++L  
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A +++ ++   G  PN  +Y+T+   L S+G    A+ +  +M  N   P+
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+++I    + G +  A ++   M S    P+VV Y  ++   C+ +    A +++E
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
            M    C PN  T+   I+G+   G    AM+L + + + + +
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score =  174 bits (441), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 183/353 (51%), Gaps = 5/353 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L  + ++D    +L Q+  +    +   +  +I +    G  ++ALK+   +   G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  YN I+  +  E        +  N++  G EP+V +YNILL+AL    + +   
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           KL+ +M ++ C P+ V+Y+ +++++C+ G++EEA   L +    G++     Y+ LI   
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+E +++ A   L  M+  G  P+++ Y+T++++LC  G  + +L I G++   GC+PN 
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ ++       G    A  +   M+  G  P+ + Y+++I  LC  G +DEA  +   
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           M      P+V TY+ ++ GF KA  +  A  +   M+ NGC PN   YT +++
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551


>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
           SV=1
          Length = 987

 Score =  255 bits (651), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 245/492 (49%), Gaps = 18/492 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++MK  G+      +  +++S+ + GL EQA K F  +RE G  P V  Y  ++ A L
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + S  N ++  M  +G  PN+ TY+ L+   CK  +V+ A ++   M      PD  
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y           Q ++  E        V  Y AL++G CK H++EEA  LL  M   G 
Sbjct: 625 MY---------FKQYDDNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +PN I Y  +I  LC VG ++ +  +  +M   G    +++++SL+  Y    R   AS 
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + ++M+     PNVV Y+ +I GLC  G  DEA  +   MEE  C PNV TY+A+IDGF 
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
             G +    ++  RM S G +PN V Y  ++   C+N     AH+L+E+M   + P +T 
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +   I+G         ++ LLD++ Q +  P ++ Y  L+D L++  R++ A  L+ E+
Sbjct: 851 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908

Query: 437 EKCGIQL--NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
                 L     TYN+++  +C A  V  AFQL  +M  +G   +  +F  +I    +  
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968

Query: 495 KVNNAIQLLDRI 506
           K++ A+ LLD I
Sbjct: 969 KISEALLLLDFI 980



 Score =  242 bits (617), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 259/529 (48%), Gaps = 30/529 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN------ 113
           G  P+ KI+N ++ A       S    +   M + G  P    YNIL+ ++C +      
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVY 168
           + +D A K   EM   G   + ++ ++    +C  G+ E+A    RE+    F    S Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           + ++N LC   K+E AF L  EM   G+  +V TY+ ++ S C  G +E +     +M  
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC PN+ ++T+L+  YL   +   A++L+  M+ EG LPN+V YS LI G C  G +++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 289 AVSVSYQM----------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           A  +  +M                ++NS  PNV TY AL+DGF K+  +  A ++ + M 
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC PN + Y  ++  LC+     +A  +  +M+    P    T+++ I       R D
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A K+L +M +  C PN+  Y E++DGL +V +  EA++L+  +E+ G Q N+VTY  ++
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G    G +    +LL +M  +G   + +T+ ++I   CK G ++ A  LL+ ++    W
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTHW 845

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                 Y  ++ G   +    E+   L ++  +   P  + + +L+ +L
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892



 Score =  232 bits (591), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 172/624 (27%), Positives = 287/624 (45%), Gaps = 73/624 (11%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++   + +L  M +EG   S  +F S++++Y   G    A K+  ++ + G  P   +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409

Query: 68  YNHILDAL-------------LAENRFS-------MINPI-YSNMKR------------- 93
           YN ++ ++             LAE  +S       ++N I  S+  R             
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469

Query: 94  -------DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
                   G  P+  TY+ +L  LC  ++++ A+ L  EM   G   D  +YT +V S C
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529

Query: 147 KLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G +E+AR+    MR       V  Y ALI+   K  K+  A  L   M+  G  PN++
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGC--------------------NPNIHSFTSL 241
           TYS +I   C  G VE +     Q+F R C                     PN+ ++ +L
Sbjct: 590 TYSALIDGHCKAGQVEKAC----QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L G+    R  EA  L + M  EG  PN + Y  LI GLC  G +DEA  V  +M E+  
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           P  + TYS+LID + K      AS++ ++M+ N C+PNVV YT M+  LC+     +A+ 
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L++ M  + C PN VT+   I G    G+++  ++LL++M      PN  TY  L+D   
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +  A  L+ E+++     +   Y  ++ G  +    +E+  LL ++  + T     
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLS 883

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS-YTSLLWGICNSGGMQEAFIYLQ 540
            + ++I    K  ++  A++LL+ +        D  S Y SL+  +C +  ++ AF    
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
           +M  +G+ P   ++  L++ LF N
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRN 967



 Score =  205 bits (521), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 167/674 (24%), Positives = 275/674 (40%), Gaps = 137/674 (20%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILD 73
           Q  L+Q + +    SE + I V+   R +      +  F +  R+ G K T  +YN ++D
Sbjct: 120 QKFLRQFREK---LSESLVIEVL---RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVD 173

Query: 74  ALLAENRFSMINPIYSNMKRDGME-----------------------------------P 98
            ++ ++   +       ++ D  E                                   P
Sbjct: 174 LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRP 233

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL- 157
           +  TYN L++A  K +R+D A  +  EM       D  +      S+CK+G+  EA  L 
Sbjct: 234 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV 293

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
               F      Y  LI+GLC+    EEA   L  M      PNV+TYST++    +   +
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +L  M + GC P+   F SL+  Y   G    A  L  +M++ G +P  V Y+ L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413

Query: 277 IHG-----------------------------------------LCSNGSMDEAVSVSYQ 295
           I                                           LCS G  ++A SV  +
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473

Query: 296 MEENSCPPNVTTYSA-----------------------------------LIDGFAKAGN 320
           M      P+ +TYS                                    ++D F KAG 
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A + +N M   GC+PNVV YT ++    +      A+ L E M  E C PN VT++ 
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593

Query: 381 FIKGLCGCGRVDWAMKLLDQM-------------KQYEC---LPNITTYNELLDGLLRVN 424
            I G C  G+V+ A ++ ++M             KQY+     PN+ TY  LLDG  + +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           RV+EA +L+  +   G + N + Y+ ++ G+C+ G + EA ++  +M   G      T++
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  Y K  + + A ++L ++       P+++ YT ++ G+C  G   EA+  +Q M  
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772

Query: 545 EGICPNFATWNVLV 558
           +G  PN  T+  ++
Sbjct: 773 KGCQPNVVTYTAMI 786



 Score =  101 bits (252), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 9/309 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D  Q +  +M   G   +   + S+I+ Y +V   + A K+  ++ E  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V IY  ++D L    +      +   M+  G +PNV TY  ++       +++   
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +LL  MG+KG AP+ V+Y  ++   CK G ++ A  L        + +  + Y  +I G 
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM--FVRGCNP 233
            KE    E+  LL E+      P +  Y  +I +L     +E +L +L ++  F      
Sbjct: 860 NKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL++   L  +   A  L++ M ++G +P + ++ +LI GL  N  + EA+ + 
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977

Query: 294 YQMEENSCP 302
             +    CP
Sbjct: 978 DFISHMVCP 986



 Score = 67.0 bits (162), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 4/190 (2%)

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            N  ++  C  G    A++ L ++K +   P+ +TYN L+   L+ +R+  A  +  E+ 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
              ++++  T     + +C+ G   EA  L+     E    D + +  +I   C+     
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFE 319

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+  L+R+R      P++++Y++LL G  N   +      L  M+ EG  P+   +N L
Sbjct: 320 EAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378

Query: 558 VRSLFSNLGH 567
           V +  ++  H
Sbjct: 379 VHAYCTSGDH 388


>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
           OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
          Length = 874

 Score =  252 bits (643), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 162/580 (27%), Positives = 294/580 (50%), Gaps = 35/580 (6%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGL--KPTVKIYNHILDALLAENRFSMINPIYSN 90
            +SV++ + +    ++A   F  +R      KP+V +YN +L++ + E R   ++ +Y +
Sbjct: 78  LLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKD 137

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ P  +T+N+L++ALC ++ VD A +L  EM  KGC P+  ++  +V   CK G 
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197

Query: 151 VEEAREL--AMR-FG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            ++  EL  AM  FG      +YN +++  C+E + +++  ++ +M + G+ P+++T+++
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257

Query: 206 IISSLCDVGNVETSLGILGQM----FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            IS+LC  G V  +  I   M    ++    PN  ++  +LKG+   G   +A  L+  +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
                L ++ +Y+  + GL  +G   EA +V  QM +    P++ +Y+ L+DG  K G L
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  I   M  NG  P+ V Y C++   C       A SL+++M   NC PN  T N  
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +  L   GR+  A +LL +M +     +  T N ++DGL     + +A E+V  +   G 
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497

Query: 442 QL-----------------------NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
                                    +++TY+T+L+G+C+AG   EA  L  +M+ E  + 
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           D++ +NI I+ +CKQGK+++A ++L  +   G  +  + +Y SL+ G+     + E    
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG-CHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           + +M  +GI PN  T+N  ++ L           +LD++M
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMM 656



 Score =  230 bits (587), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 264/536 (49%), Gaps = 32/536 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D  + L  +M  +G   +E  F  ++  Y + GL ++ L++   +  FG
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IYN I+ +   E R      +   M+ +G+ P++ T+N  + ALCK  +V  A 
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNAL 171
           ++  +M          P++++Y  ++   CK+G +E+A+ L  ++R     + +  YN  
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GL +  K  EA  +L +M D+GI P++ +Y+ ++  LC +G +  +  I+G M   G 
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+  ++  LL GY   G+   A  L   M+R   LPN    + L+H L   G + EA  
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNL--------------------LGASQIW--- 328
           +  +M E     +  T + ++DG   +G L                    LG S I    
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + +I N C P+++ Y+ ++  LC+   F +A +L  +M  E   P++V +N FI   C  
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G++  A ++L  M++  C  ++ TYN L+ GL   N++ E   L+ E+++ GI  NI TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           NT +  +C    V +A  LL +M+ +    +  +F  +I A+CK    + A ++ +
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688



 Score =  195 bits (496), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 227/499 (45%), Gaps = 29/499 (5%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++  + +VGL E A  +F  IRE     +++ YN  L  L+   +F     +   M   G
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P++++YNIL+  LCK   +  A  ++  M   G  PDAV+Y  ++   C +G+V+ A+
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416

Query: 156 EL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L    MR     + Y  N L++ L K  +I EA  LL +M ++G   + +T + I+  L
Sbjct: 417 SLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476

Query: 211 CDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLKGYLL 247
           C  G ++ ++ I+  M V G                       C P++ ++++LL G   
Sbjct: 477 CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCK 536

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            GR  EA +L+  M+ E   P+ VAY+  IH  C  G +  A  V   ME+  C  ++ T
Sbjct: 537 AGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLET 596

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y++LI G      +     + + M   G SPN+  Y   ++ LC+      A +L+++M 
Sbjct: 597 YNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMM 656

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +N  PN  +F   I+  C     D A ++ +      C      Y+ + + LL   ++ 
Sbjct: 657 QKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLL 715

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A EL+  +   G +L    Y  ++  +C+   +  A  +L KM+  G   D      +I
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVI 775

Query: 488 YAYCKQGKVNNAIQLLDRI 506
               K G    A    D++
Sbjct: 776 DGLGKMGNKKEANSFADKM 794



 Score =  109 bits (273), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 154/344 (44%), Gaps = 26/344 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    +++ M+V G         ++ NSY  +GL + +L       E    P +  Y+
Sbjct: 481 ELDKAIEIVKGMRVHG----SAALGNLGNSY--IGLVDDSLI------ENNCLPDLITYS 528

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+ L    RF+    +++ M  + ++P+   YNI +   CK  ++  A+++L +M  K
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEA 184
           GC     +Y +++  +    Q+ E   L       G+S     YN  I  LC+  K+E+A
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM+ + I PNV ++  +I + C V + + +  +  +  V  C      ++ +   
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNE 707

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            L  G+  +A++L   ++  GF      Y  L+  LC    ++ A  + ++M +     +
Sbjct: 708 LLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM--------ISNGCSPNV 340
                 +IDG  K GN   A+   ++M        ++N   PN 
Sbjct: 768 PAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811



 Score = 99.8 bits (247), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 27/268 (10%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           E +GEK + D V Y               +FI   + + + G    A ++   + + G  
Sbjct: 549 EMMGEKLQPDSVAY--------------NIFI---HHFCKQGKISSAFRVLKDMEKKGCH 591

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
            +++ YN ++  L  +N+   I+ +   MK  G+ PN+ TYN  ++ LC+  +V+ A  L
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNL 651

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-------YNALINGL 175
           L EM  K  AP+  S+  ++ + CK+   + A+E+   F + VS+       Y+ + N L
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV---FETAVSICGQKEGLYSLMFNEL 708

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               ++ +A  LL  ++DRG +     Y  ++ SLC    +E + GIL +M  RG   + 
Sbjct: 709 LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            +   ++ G    G   EA+   ++M+ 
Sbjct: 769 AALMPVIDGLGKMGNKKEANSFADKMME 796



 Score = 41.6 bits (96), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 3/167 (1%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF-G 60
           I+ L E  +++    LL +M  + ++ +   F  +I ++ +V   + A ++F       G
Sbjct: 636 IQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            K    +Y+ + + LLA  +      +   +   G E   F Y  L+++LCK + ++ A 
Sbjct: 696 QKEG--LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV 167
            +L +M ++G   D  +   ++  + K+G  +EA   A +     SV
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASV 800


>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
           OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
          Length = 666

 Score =  251 bits (640), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 257/511 (50%), Gaps = 25/511 (4%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N ++   +  NR  +   +Y  M+   +  N++++NIL+K  C  +++  +     ++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAR------------ELAMRFGSGVSV--------Y 168
            G  PD V++ T++  +C   ++ EA             E    F   V +        +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LINGLC E ++ EA  L+ +MV +G+  +V+TY TI++ +C +G+ +++L +L +M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
               P++  +++++      G   +A  L++ M+ +G  PNV  Y+ +I G CS G   +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +   M E    P+V T++ALI    K G L  A ++ + M+     P+ V Y  M+ 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C++N F  A  + + MA     P+ VTFNT I   C   RVD  M+LL ++ +   + 
Sbjct: 410 GFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N TTYN L+ G   V+ +  A +L  E+   G+  + +T N +L+G C    + EA +L 
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             + +    LD + +NIII+  CK  KV+ A  L   +   G   PD+ +Y  ++ G C 
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPDVQTYNVMISGFCG 584

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              + +A +   KM + G  P+ +T+N L+R
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615



 Score =  225 bits (573), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 240/482 (49%), Gaps = 24/482 (4%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFS--------MIN-------PIYSNMKR 93
           +L  F ++ + G +P V  +N +L  L  E+R S        M+         ++  M  
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            G+ P V T+N L+  LC   RV  A  L+ +M  KG   D V+Y TIV+ +CK+G  + 
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279

Query: 154 ARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A  L  +         V +Y+A+I+ LCK+    +A +L  EM+++GI PNV TY+ +I 
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G    +  +L  M  R  NP++ +F +L+   +  G+  EA  L + M+     P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           + V Y+++I+G C +   D+A      M +    P+V T++ +ID + +A  +    Q+ 
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             +   G   N   Y  ++   C+ +  + A  L ++M      P+T+T N  + G C  
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            +++ A++L + ++  +   +   YN ++ G+ + ++V EA++L   +   G++ ++ TY
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N ++ G C    + +A  L  KM   G + D  T+N +I    K G+++ +I+L+  +R 
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635

Query: 509 GG 510
            G
Sbjct: 636 NG 637



 Score =  188 bits (478), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 199/411 (48%), Gaps = 20/411 (4%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N +I    + ++ + A  L  +M  R I  N+ +++ +I   CD   +  SL   G++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL---------------PNVVAY 273
            G  P++ +F +LL G  L  R  EA  L+  M+  GFL               P V+ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLI+GLC  G + EA ++  +M       +V TY  +++G  K G+   A  + ++M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               P+VV Y+ ++  LC++     A  L  +M  +   PN  T+N  I G C  GR   
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +LL  M + E  P++ T+N L+   ++  ++ EA +L  E+    I  + VTYN++++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C+     +A  +   M       D +TFN II  YC+  +V+  +QLL  I   G   
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG-LV 464

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +  +Y +L+ G C    +  A    Q+M++ G+CP+  T N+L+     N
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515



 Score =  180 bits (456), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 196/393 (49%), Gaps = 11/393 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  +G+      + +++N   ++G  + AL +  ++ E  +KP V IY+ I+D L 
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   S    ++S M   G+ PNVFTYN ++   C   R   A +LL +M  +   PD +
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367

Query: 137 SYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++  ++S+  K G++ EA +L         F   V+ YN++I G CK ++ ++A      
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT-YNSMIYGFCKHNRFDDA----KH 422

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M D    P+V+T++TII   C    V+  + +L ++  RG   N  ++ +L+ G+     
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            + A DL+  MI  G  P+ +  + L++G C N  ++EA+ +   ++ +    +   Y+ 
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I G  K   +  A  ++  +  +G  P+V  Y  M+   C  +    A+ L  KM    
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             P+  T+NT I+G    G +D +++L+ +M+ 
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635



 Score =  162 bits (411), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 197/444 (44%), Gaps = 44/444 (9%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRF----SMINP----------------- 86
           +A+ +F ++ E GL P V  +N +++ L  E R     +++N                  
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 87  --------------IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
                         + S M+   ++P+V  Y+ ++  LCK+     A  L  EM  KG A
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           P+  +Y  ++   C  G+  +A+ L            V  +NALI+   KE K+ EA  L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM+ R I P+ +TY+++I   C     + +      MF    +P++ +F +++  Y  
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCR 444

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             R  E   L   + R G + N   Y+TLIHG C   +++ A  +  +M  +   P+  T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
            + L+ GF +   L  A +++  +  +    + VAY  ++  +C+ +   +A  L   + 
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                P+  T+N  I G CG   +  A  L  +MK     P+ +TYN L+ G L+   + 
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 428 EAFELVTEIEKCGIQLNIVTYNTI 451
           ++ EL++E+   G   +  T   +
Sbjct: 625 KSIELISEMRSNGFSGDAFTIKMV 648



 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 169/342 (49%), Gaps = 9/342 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +       QYL  +M  +G++ +   +  +I+ +   G    A ++   + E  
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++ A + E +      +   M    + P+  TYN ++   CK+NR D A 
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            +   M     +PD V++ TI+   C+  +V+E     RE++ R   +  + YN LI+G 
Sbjct: 422 HMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +  A  L  EM+  G+ P+ IT + ++   C+   +E +L +   + +   + + 
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G   G +  EA DL+  +   G  P+V  Y+ +I G C   ++ +A  + ++
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           M++N   P+ +TY+ LI G  KAG +  + ++ + M SNG S
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639



 Score = 84.7 bits (208), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 70/324 (21%)

Query: 276 LIHGLCS---NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           LIHG  +     S+     V+++ EE         + +L D          A   ++ M+
Sbjct: 49  LIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDD----------AIDFFDYMV 98

Query: 333 SNGCSPNVVAYTC--MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
            +   P   A  C  ++ V  + N    A SL  KM     P N  +FN  IK  C C +
Sbjct: 99  RS--RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           + +++               +T+ +L                     K G Q ++VT+NT
Sbjct: 157 LSFSL---------------STFGKL--------------------TKLGFQPDVVTFNT 181

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDA----------------ITFNIIIYAYCKQG 494
           +LHG+C    + EA  L G M +E   L+A                ITFN +I   C +G
Sbjct: 182 LLHGLCLEDRISEALALFGYM-VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           +V  A  L++++ G G  + D+++Y +++ G+C  G  + A   L KM    I P+   +
Sbjct: 241 RVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 555 NVLVRSLFSNLGHLGPVYILDDIM 578
           + ++  L  +  H    Y+  +++
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEML 323



 Score = 53.9 bits (128), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 7/152 (4%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           EKL E  E      L + +++  +      +  +I+   +    ++A  +F  +   G++
Sbjct: 516 EKLEEALE------LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V+ YN ++     ++  S  N ++  MK +G EP+  TYN L++   K   +D + +L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           + EM + G + DA +   +V+ +   G+++++
Sbjct: 630 ISEMRSNGFSGDAFT-IKMVADLITDGRLDKS 660


>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
           SV=1
          Length = 974

 Score =  249 bits (635), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 287/579 (49%), Gaps = 13/579 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G++    ++   I    + G+ E+A  +F  +   GL P  + Y  +
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++    E        +   MK+  +  + +TY  ++K +C +  +DGAY ++ EM   GC
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 132 APDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
            P+ V YTT++ +  +  +  +A R L      G++     YN+LI GL K  +++EA  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L EMV+ G+ PN  TY   IS   +     ++   + +M   G  PN    T L+  Y 
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+  EA   +  M+ +G L +   Y+ L++GL  N  +D+A  +  +M      P+V 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y  LI+GF+K GN+  AS I++ M+  G +PNV+ Y  ++   C++    +A  L+++M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           + +   PN VT+ T I G C  G +  A +L D+MK    +P+   Y  L+DG  R+N V
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT-----KLDAI 481
           + A  +    +K G   +   +N +++ V + G      ++L + L++G+     K + +
Sbjct: 749 ERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNR-LMDGSFDRFGKPNDV 806

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I   CK+G +  A +L  +++      P +I+YTSLL G    G   E F    +
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNAN-LMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            +  GI P+   ++V++ +          + ++D + A 
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904



 Score =  228 bits (580), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 257/543 (47%), Gaps = 8/543 (1%)

Query: 26  VSCSEGVFISVINSYRRVGL-AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           V   + V       +R   L  + ALK+   +   GL P    Y+ ++D L    R    
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   M   G+  +  TY++L+  L K    D A  L+ EM + G       Y   +  
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           + K G +E+A+ L     A         Y +LI G C+E  + + + LL EM  R I  +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY T++  +C  G+++ +  I+ +M   GC PN+  +T+L+K +L   R  +A  +  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M  +G  P++  Y++LI GL     MDEA S   +M EN   PN  TY A I G+ +A 
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A +    M   G  PN V  T ++   C+     +A S    M  +    +  T+ 
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + GL    +VD A ++  +M+     P++ +Y  L++G  ++  +++A  +  E+ + 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G+  N++ YN +L G CR+G + +A +LL +M ++G   +A+T+  II  YCK G +  A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +L D ++  G   PD   YT+L+ G C    ++ A I +     +G   + A +N L+ 
Sbjct: 717 FRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALIN 774

Query: 560 SLF 562
            +F
Sbjct: 775 WVF 777



 Score =  216 bits (549), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 266/592 (44%), Gaps = 63/592 (10%)

Query: 29  SEGVFISVI-NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
            +GV   ++ + Y   G  E+A+ +F       L P +     +LDALL  NR  +   +
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNN---------------------RVDGAYKLLVEM 126
           Y  M    +  +V TY++L+ A C+                        VDGA KL   M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKI 181
             KG  P   +Y  ++  +CK+ ++E+A+ L +   S GVS+    Y+ LI+GL K    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  L+ EMV  GI+     Y   I  +   G +E +  +   M   G  P   ++ SL
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           ++GY       +  +L   M +   + +   Y T++ G+CS+G +D A ++  +M  + C
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV  Y+ LI  F +      A ++   M   G +P++  Y  ++  L +     +A S
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN------------ 409
            + +M      PN  T+  FI G         A K + +M++   LPN            
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 410 -----------------------ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
                                    TY  L++GL + ++V +A E+  E+   GI  ++ 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +Y  +++G  + G + +A  +  +M+ EG   + I +N+++  +C+ G++  A +LLD +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              G  +P+ ++Y +++ G C SG + EAF    +M  +G+ P+   +  LV
Sbjct: 689 SVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  201 bits (511), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 245/511 (47%), Gaps = 15/511 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++DG   ++++M   G   +  ++ ++I ++ +      A+++   ++E G+ P +  YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L    R          M  +G++PN FTY   +    + +    A K + EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSG-VSVYNALINGLCKEHKIEEA 184
           G  P+ V  T +++  CK G+V EA    R +  +   G    Y  L+NGL K  K+++A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  EM  +GI P+V +Y  +I+    +GN++ +  I  +M   G  PN+  +  LL G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G   +A +L + M  +G  PN V Y T+I G C +G + EA  +  +M+     P+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y+ L+DG  +  ++  A  I+      GC+ +   +  ++  + +         ++ 
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLN 790

Query: 365 KM---AFENC-PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           ++   +F+    PN VT+N  I  LC  G ++ A +L  QM+    +P + TY  LL+G 
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI-----EG 475
            ++ R  E F +  E    GI+ + + Y+ I++   + GM  +A  L+ +M       +G
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG 910

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            KL   T   ++  + K G++  A ++++ +
Sbjct: 911 CKLSISTCRALLSGFAKVGEMEVAEKVMENM 941



 Score =  172 bits (436), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 206/426 (48%), Gaps = 15/426 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E  E       +++M+  GV  ++ +   +IN Y + G   +A   +  + + G+    K
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  +++ L   ++      I+  M+  G+ P+VF+Y +L+    K   +  A  +  EM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKI 181
             +G  P+ + Y  ++   C+ G++E+A+EL               Y  +I+G CK   +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EAF L  EM  +G+ P+   Y+T++   C + +VE ++ I G    +GC  +   F +L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNAL 772

Query: 242 LKGYLLGGRTHEASDLWNRMIREGF----LPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +      G+T   +++ NR++   F     PN V Y+ +I  LC  G+++ A  + +QM+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             +  P V TY++L++G+ K G       +++  I+ G  P+ + Y+ ++    +  M  
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892

Query: 358 QAHSLIEKMAFEN-----CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +A  L+++M  +N     C  +  T    + G    G ++ A K+++ M + + +P+  T
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952

Query: 413 YNELLD 418
             EL++
Sbjct: 953 VIELIN 958



 Score = 97.8 bits (242), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 37/314 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI+  + LL +M V+G+  +   + ++I+ Y + G   +A ++F  ++  GL P   +Y 
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL-----------LKALCKNNRVDG 118
            ++D     N       I+   K+ G   +   +N L           LK    N  +DG
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALIN 173
           ++       ++   P+ V+Y  ++  +CK G +E A+EL  +  +      V  Y +L+N
Sbjct: 796 SF-------DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR---- 229
           G  K  +  E F +  E +  GI+P+ I YS II++    G    +L ++ QMF +    
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908

Query: 230 -GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC  +I +  +LL G+   G    A  +   M+R  ++P+      LI+  C       
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC------- 961

Query: 289 AVSVSYQMEENSCP 302
            +S + ++E ++ P
Sbjct: 962 -ISSNQRVEADAVP 974



 Score = 49.3 bits (116), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 34/240 (14%)

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCP-------------------PNTVTFNTFI 382
           +++ +   LC    F +A S++E+M   N P                    + V F    
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            G    G ++ A+ +       E +P ++    LLD LLR NR+   +++   + +  + 
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            ++ TY+ ++   CRAG V      LGK ++  T+ +  T  +          V+ A++L
Sbjct: 219 FDVKTYHMLIIAHCRAGNV-----QLGKDVLFKTEKEFRTATL---------NVDGALKL 264

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            + +   G   P   +Y  L+ G+C    +++A   L +M + G+  +  T+++L+  L 
Sbjct: 265 KESMICKG-LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323


>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
           mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
           SV=1
          Length = 507

 Score =  248 bits (634), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 243/460 (52%), Gaps = 12/460 (2%)

Query: 28  CSEGVFISVINSYRRV---GLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           C    +I   +SYR++   GL       AL +F R+      P++  +  +L  +   NR
Sbjct: 39  CGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR 98

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           + ++  ++  M+  G+ P + T NI++  +C +++   A   L +M   G  PD V++T+
Sbjct: 99  YDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTS 158

Query: 141 IVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++  C   ++E+A     + L M F   V  Y  LI  LCK   +  A  L  +M   G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
             PNV+TY+ +++ LC++G    +  +L  M  R   PN+ +FT+L+  ++  G+  EA 
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L+N MI+    P+V  Y +LI+GLC  G +DEA  + Y ME N C PN   Y+ LI GF
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K+  +    +I+  M   G   N + YT +++  C       A  +  +M+    PP+ 
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            T+N  + GLC  G+V+ A+ + + M++ E   NI TY  ++ G+ ++ +V++AF+L   
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +   G++ N++TY T++ G CR G++ EA  L  KM  +G
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498



 Score =  215 bits (548), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 223/459 (48%), Gaps = 6/459 (1%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---- 157
           +Y  +L+    N + + A  L   M +    P  + +T ++S I K+ + +    L    
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             +     +   N +++ +C   +   A   L +M+  G +P+++T++++++  C    +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E ++ +  Q+   G  PN+ ++T+L++        + A +L+N+M   G  PNVV Y+ L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + GLC  G   +A  +   M +    PNV T++ALID F K G L+ A +++N MI    
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+V  Y  ++  LC   +  +A  +   M    C PN V + T I G C   RV+  MK
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +  +M Q   + N  TY  L+ G   V R   A E+  ++       +I TYN +L G+C
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
             G V +A  +   M      ++ +T+ III   CK GKV +A  L   +   G   P++
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG-MKPNV 468

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           I+YT+++ G C  G + EA    +KM  +G  PN + + 
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  200 bits (508), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 208/422 (49%), Gaps = 5/422 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++   ++   +  + +F +++  G+ P +   N ++  +   ++    +     M 
Sbjct: 86  FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EP++ T+  LL   C  NR++ A  L  ++   G  P+ V+YTT++  +CK   + 
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205

Query: 153 EARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A EL  + G+      V  YNAL+ GLC+  +  +A WLL +M+ R I+PNVIT++ +I
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +   VG +  +  +   M      P++ ++ SL+ G  + G   EA  ++  M R G  
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN V Y+TLIHG C +  +++ + + Y+M +     N  TY+ LI G+   G    A ++
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +N+M S    P++  Y  ++  LC N    +A  + E M       N VT+   I+G+C 
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G+V+ A  L   +      PN+ TY  ++ G  R   + EA  L  ++++ G   N   
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505

Query: 448 YN 449
           Y 
Sbjct: 506 YK 507



 Score =  171 bits (434), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 199/398 (50%), Gaps = 1/398 (0%)

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
             S Y  ++       +  +A  L   MV     P++I ++ ++S +  +   +  + + 
Sbjct: 47  AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            QM + G  P + +   ++    L  +   AS    +M++ GF P++V +++L++G C  
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             +++A+++  Q+      PNV TY+ LI    K  +L  A +++N+M +NG  PNVV Y
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             +V  LC+   +  A  L+  M      PN +TF   I      G++  A +L + M Q
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P++ TY  L++GL     + EA ++   +E+ G   N V Y T++HG C++  V +
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             ++  +M  +G   + IT+ ++I  YC  G+ + A ++ +++       PDI +Y  LL
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM-SSRRAPPDIRTYNVLL 405

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C +G +++A +  + M    +  N  T+ ++++ +
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443



 Score =  148 bits (373), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 142/274 (51%), Gaps = 8/274 (2%)

Query: 9   CEID---GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           CEI       +LL+ M    +  +   F ++I+++ +VG   +A +++  + +  + P V
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y  +++ L           ++  M+R+G  PN   Y  L+   CK+ RV+   K+  E
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHK 180
           M  KG   + ++YT ++   C +G+ + A+E+     + R    +  YN L++GLC   K
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E+A  +   M  R +D N++TY+ II  +C +G VE +  +   +F +G  PN+ ++T+
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           ++ G+   G  HEA  L+ +M  +GFLPN   Y 
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  142 bits (358), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 171/363 (47%), Gaps = 36/363 (9%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+  +L+  L   + ++A DL+ RM+    LP+++ ++ L+  +      D  +S+  QM
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 297 EENSCPP-----------------------------------NVTTYSALIDGFAKAGNL 321
           +    PP                                   ++ T+++L++G+     +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  ++++++  G  PNVV YT +++ LC+N   + A  L  +M      PN VT+N  
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           + GLC  GR   A  LL  M +    PN+ T+  L+D  ++V ++ EA EL   + +  +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ TY ++++G+C  G++ EA Q+   M   G   + + +  +I+ +CK  +V + ++
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   +   G    + I+YT L+ G C  G    A     +M +    P+  T+NVL+  L
Sbjct: 350 IFYEMSQKGVV-ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 562 FSN 564
             N
Sbjct: 409 CCN 411



 Score =  130 bits (327), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 143/298 (47%), Gaps = 5/298 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM   G   +   + +++     +G    A  +   + +  ++P V  +  ++DA +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +Y+ M +  + P+VFTY  L+  LC    +D A ++   M   GC P+ V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            YTT++   CK  +VE+  ++          +    Y  LI G C   + + A  +  +M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             R   P++ TY+ ++  LC  G VE +L I   M  R  + NI ++T +++G    G+ 
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            +A DL+  +  +G  PNV+ Y+T+I G C  G + EA S+  +M+E+   PN + Y 
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507


>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
           OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
          Length = 761

 Score =  248 bits (634), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 273/550 (49%), Gaps = 15/550 (2%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C++  V +  + + V G     GVF ++ +    +G+ E+A++ F +++ F + P  +  
Sbjct: 175 CDVFDVLWSTRNVCVPGF----GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N +L       +   +   + +M   G  P VFTYNI++  +CK   V+ A  L  EM  
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290

Query: 129 KGCAPDAVSYTTIVSSICKLGQV-------EEARELAMRFGSGVSVYNALINGLCKEHKI 181
           +G  PD V+Y +++    K+G++       EE +++       V  YNALIN  CK  K+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE--PDVITYNALINCFCKFGKL 348

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
                   EM   G+ PNV++YST++ + C  G ++ ++     M   G  PN +++TSL
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +      G   +A  L N M++ G   NVV Y+ LI GLC    M EA  +  +M+    
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN+ +Y+ALI GF KA N+  A ++ N +   G  P+++ Y   +  LC       A  
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           ++ +M       N++ + T +      G     + LLD+MK+ +    + T+  L+DGL 
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588

Query: 422 RVNRVKEAFELVTEIE-KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           +   V +A +    I    G+Q N   +  ++ G+C+   V  A  L  +M+ +G   D 
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
             +  ++    KQG V  A+ L D++   G    D+++YTSL+WG+ +   +Q+A  +L+
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIG-MKLDLLAYTSLVWGLSHCNQLQKARSFLE 707

Query: 541 KMLNEGICPN 550
           +M+ EGI P+
Sbjct: 708 EMIGEGIHPD 717



 Score =  210 bits (535), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 244/508 (48%), Gaps = 6/508 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +  +  + D V+   + M   G   +   +  +I+   + G  E A  +F  ++  G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++D      R       +  MK    EP+V TYN L+   CK  ++    
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGL 175
           +   EM   G  P+ VSY+T+V + CK G +++A +  +   R G       Y +LI+  
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + +AF L  EM+  G++ NV+TY+ +I  LCD   ++ +  + G+M   G  PN+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ G++       A +L N +   G  P+++ Y T I GLCS   ++ A  V  +
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E     N   Y+ L+D + K+GN      + + M        VV +  ++  LC+N +
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592

Query: 356 FHQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             +A     +++ +     N   F   I GLC   +V+ A  L +QM Q   +P+ T Y 
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +   V EA  L  ++ + G++L+++ Y +++ G+     + +A   L +M+ E
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           G   D +    ++  + + G ++ A++L
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVEL 740



 Score =  209 bits (532), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 6/487 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P    ++ L   L     ++ A +   +M      P   S   ++    KLG+ ++ +  
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 158 AMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                G+G    V  YN +I+ +CKE  +E A  L  EM  RG+ P+ +TY+++I     
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           VG ++ ++    +M    C P++ ++ +L+  +   G+     + +  M   G  PNVV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YSTL+   C  G M +A+     M      PN  TY++LID   K GNL  A ++ N M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   NVV YT ++  LC      +A  L  KM      PN  ++N  I G      +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++LL+++K     P++  Y   + GL  + +++ A  ++ E+++CGI+ N + Y T++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
               ++G   E   LL +M     ++  +TF ++I   CK   V+ A+   +RI      
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
             +   +T+++ G+C    ++ A    ++M+ +G+ P+   +  L+   F   G++    
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ-GNVLEAL 668

Query: 573 ILDDIMA 579
            L D MA
Sbjct: 669 ALRDKMA 675



 Score =  171 bits (433), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 211/450 (46%), Gaps = 45/450 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIRE 58
           MI+  G+   +D      ++MK   + C   V  + ++IN + + G     L+ +  ++ 
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMK--DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            GLKP V  Y+ ++DA   E         Y +M+R G+ PN +TY  L+ A CK   +  
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALIN 173
           A++L  EM   G   + V+YT ++  +C   +++EA EL  +  +      ++ YNALI+
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G  K   ++ A  LL E+  RGI P+++ Y T I  LC +  +E +  ++ +M   G   
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540

Query: 234 NIHSFTSLLKGYLLGGRTHE-----------------------------------ASDLW 258
           N   +T+L+  Y   G   E                                   A D +
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600

Query: 259 NRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           NR+  + G   N   ++ +I GLC +  ++ A ++  QM +    P+ T Y++L+DG  K
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            GN+L A  + ++M   G   +++AYT +V  L   N   +A S +E+M  E   P+ V 
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             + +K     G +D A++L   + +++ L
Sbjct: 721 CISVLKKHYELGCIDEAVELQSYLMKHQLL 750



 Score =  158 bits (399), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 165/333 (49%), Gaps = 6/333 (1%)

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           C    +   S+LK  +L     +  D LW+   R   +P    +  L   L   G ++EA
Sbjct: 154 CARMYYDANSVLKEMVLSKADCDVFDVLWS--TRNVCVPGFGVFDALFSVLIDLGMLEEA 211

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           +    +M+     P   + + L+  FAK G      + +  MI  G  P V  Y  M+  
Sbjct: 212 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 271

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           +C+      A  L E+M F    P+TVT+N+ I G    GR+D  +   ++MK   C P+
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           + TYN L++   +  ++    E   E++  G++ N+V+Y+T++   C+ GM+ +A +   
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICN 528
            M   G   +  T+  +I A CK G +++A +L +  ++ G EWN  +++YT+L+ G+C+
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN--VVTYTALIDGLCD 449

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  M+EA     KM   G+ PN A++N L+   
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482


>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
           OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
          Length = 1096

 Score =  247 bits (631), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 270/572 (47%), Gaps = 42/572 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+  +I  Y R G+ + +L++F  +  +G  P+V   N IL +++       +      M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            +  + P+V T+NIL+  LC     + +  L+ +M   G AP  V+Y T++   CK G+ 
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A EL     S      V  YN LI+ LC+ ++I + + LL +M  R I PN +TY+T+
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+   + G V  +  +L +M   G +PN  +F +L+ G++  G   EA  ++  M  +G 
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 267 LPNVVAYSTL-----------------------------------IHGLCSNGSMDEAVS 291
            P+ V+Y  L                                   I GLC NG +DEAV 
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M ++   P++ TYSALI+GF K G    A +I  R+   G SPN + Y+ ++   C
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  + E M  E    +  TFN  +  LC  G+V  A + +  M     LPN  
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +++ L++G        +AF +  E+ K G      TY ++L G+C+ G + EA + L  +
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
                 +D + +N ++ A CK G +  A+ L   +       PD  +YTSL+ G+C  G 
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL-PDSYTYTSLISGLCRKGK 663

Query: 532 MQEAFIYLQKMLNEG-ICPNFATWNVLVRSLF 562
              A ++ ++    G + PN   +   V  +F
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695



 Score =  226 bits (576), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 261/560 (46%), Gaps = 6/560 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V   L++M    +      F  +IN     G  E++  +  ++ + G  PT+  YN +L 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               + RF     +  +MK  G++ +V TYN+L+  LC++NR+   Y LL +M  +   P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 134 DAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLL 188
           + V+Y T+++     G+V  A +L    + FG   +   +NALI+G   E   +EA  + 
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M  +G+ P+ ++Y  ++  LC     + + G   +M   G      ++T ++ G    
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   EA  L N M ++G  P++V YS LI+G C  G    A  +  ++      PN   Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LI    + G L  A +I+  MI  G + +   +  +V  LC+     +A   +  M  
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   PNTV+F+  I G    G    A  + D+M +    P   TY  LL GL +   ++E
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A + +  +      ++ V YNT+L  +C++G + +A  L G+M+      D+ T+  +I 
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C++GK   AI         G   P+ + YT  + G+  +G  +    + ++M N G  
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716

Query: 549 PNFATWNVLVRSLFSNLGHL 568
           P+  T N ++   +S +G +
Sbjct: 717 PDIVTTNAMIDG-YSRMGKI 735



 Score =  226 bits (575), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 274/620 (44%), Gaps = 75/620 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M   G+S +   F ++I+ +   G  ++ALKMFY +   GL P+   Y  +LD L 
Sbjct: 320 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               F +    Y  MKR+G+     TY  ++  LCKN  +D A  LL EM   G  PD V
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 439

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----------------------------- 166
           +Y+ +++  CK+G+ + A+E+  R +  G+S                             
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499

Query: 167 ----------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      +N L+  LCK  K+ EA   +  M   GI PN +++  +I+   + G  
Sbjct: 500 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +  +M   G +P   ++ SLLKG   GG   EA      +       + V Y+TL
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG- 335
           +  +C +G++ +AVS+  +M + S  P+  TY++LI G  + G  + A        + G 
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PN V YTC V  + +   +       E+M      P+ VT N  I G    G+++   
Sbjct: 680 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 739

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            LL +M      PN+TTYN LL G  +   V  +F L   I   GI  + +T ++++ G+
Sbjct: 740 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----- 510
           C + M+    ++L   +  G ++D  TFN++I   C  G++N A  L+  +   G     
Sbjct: 800 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 859

Query: 511 -----------------------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
                                          +P+   Y  L+ G+C  G ++ AF+  ++
Sbjct: 860 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 919

Query: 542 MLNEGICPNFATWNVLVRSL 561
           M+   ICP     + +VR+L
Sbjct: 920 MIAHKICPPNVAESAMVRAL 939



 Score =  218 bits (555), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 266/554 (48%), Gaps = 7/554 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+   +  +E  + ++IN +   G    A ++   +  FGL P    +N ++D  +
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +E  F     ++  M+  G+ P+  +Y +LL  LCKN   D A    + M   G     +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++  +CK G ++EA  L            +  Y+ALING CK  + + A  ++C +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PN I YST+I + C +G ++ ++ I   M + G   +  +F  L+      G+ 
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +    M  +G LPN V++  LI+G  ++G   +A SV  +M +    P   TY +L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  K G+L  A +    + +   + + V Y  ++  +C++    +A SL  +M   + 
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLLRVNRVKEAF 430
            P++ T+ + I GLC  G+   A+    + + +   LPN   Y   +DG+ +  + K   
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
               +++  G   +IVT N ++ G  R G + +   LL +M  +    +  T+NI+++ Y
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K+  V+ +  L   I   G   PD ++  SL+ GIC S  ++     L+  +  G+  +
Sbjct: 765 SKRKDVSTSFLLYRSIILNGIL-PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823

Query: 551 FATWNVLVRSLFSN 564
             T+N+L+    +N
Sbjct: 824 RYTFNMLISKCCAN 837



 Score =  218 bits (554), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 265/585 (45%), Gaps = 42/585 (7%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
            YL+Q+M+  G + +   + +V++ Y + G  + A+++   ++  G+   V  YN ++  
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-------- 126
           L   NR +    +  +M++  + PN  TYN L+       +V  A +LL EM        
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332

Query: 127 --------------GN-------------KGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
                         GN             KG  P  VSY  ++  +CK  + + AR   M
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392

Query: 160 RFG-SGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R   +GV V    Y  +I+GLCK   ++EA  LL EM   GIDP+++TYS +I+  C VG
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             +T+  I+ +++  G +PN   +++L+      G   EA  ++  MI EG   +   ++
Sbjct: 453 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            L+  LC  G + EA      M  +   PN  ++  LI+G+  +G  L A  +++ M   
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 572

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P    Y  ++K LC+     +A   ++ +       +TV +NT +  +C  G +  A
Sbjct: 573 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 632

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILH 453
           + L  +M Q   LP+  TY  L+ GL R  +   A     E E  G  L N V Y   + 
Sbjct: 633 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 692

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+ +AG          +M   G   D +T N +I  Y + GK+     LL  + G     
Sbjct: 693 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGG 751

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           P++ +Y  LL G      +  +F+  + ++  GI P+  T + LV
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796



 Score =  216 bits (549), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 240/485 (49%), Gaps = 27/485 (5%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           N   Y+IL++   +   +  + ++   MG  G  P   +   I+ S+ K G+        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 155 -RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
              L  +    V+ +N LIN LC E   E++ +L+ +M   G  P ++TY+T++   C  
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLL----------KGYLLGGRTHEASDLWNRMIR 263
           G  + ++ +L  M  +G + ++ ++  L+          KGYLL        D+  RMI 
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL------LRDMRKRMIH 295

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
               PN V Y+TLI+G  + G +  A  +  +M      PN  T++ALIDG    GN   
Sbjct: 296 ----PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++  M + G +P+ V+Y  ++  LC+N  F  A     +M         +T+   I 
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G +D A+ LL++M +    P+I TY+ L++G  +V R K A E+V  I + G+  
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N + Y+T+++  CR G + EA ++   M++EG   D  TFN+++ + CK GKV  A + +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             +   G   P+ +S+  L+ G  NSG   +AF    +M   G  P F T+  L++ L  
Sbjct: 532 RCMTSDGIL-PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 564 NLGHL 568
             GHL
Sbjct: 591 G-GHL 594



 Score =  185 bits (469), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 158/656 (24%), Positives = 278/656 (42%), Gaps = 78/656 (11%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            MI+ L +   +D    LL +M  +G+      + ++IN + +VG  + A ++  RI   G
Sbjct: 409  MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV---- 116
            L P   IY+ ++              IY  M  +G   + FT+N+L+ +LCK  +V    
Sbjct: 469  LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 117  --------DG-----------------------AYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                    DG                       A+ +  EM   G  P   +Y +++  +
Sbjct: 529  EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 146  CKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK G + EA +      A+       +YN L+  +CK   + +A  L  EMV R I P+ 
Sbjct: 589  CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY+++IS LC  G    ++    +   RG   PN   +T  + G    G+         
Sbjct: 649  YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +M   G  P++V  + +I G    G +++   +  +M   +  PN+TTY+ L+ G++K  
Sbjct: 709  QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            ++  +  ++  +I NG  P+ +    +V  +C++NM      +++         +  TFN
Sbjct: 769  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I   C  G ++WA  L+  M       +  T + ++  L R +R +E+  ++ E+ K 
Sbjct: 829  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM------------------LIEGTKLDAI 481
            GI      Y  +++G+CR G +  AF +  +M                  L +  K D  
Sbjct: 889  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 482  T-----------------FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            T                 F  +++  CK G V  A++L   +   G    D++SY  L+ 
Sbjct: 949  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG-LKLDLVSYNVLIT 1007

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN-LGHLGPVYILDDIMA 579
            G+C  G M  AF   ++M  +G   N  T+  L+R L +      G   IL D++A
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1063



 Score =  133 bits (334), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 158/330 (47%), Gaps = 1/330 (0%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           R CN N   +  L++ YL  G   ++ +++  M   GF P+V   + ++  +  +G    
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
             S   +M +    P+V T++ LI+     G+   +S +  +M  +G +P +V Y  ++ 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C+   F  A  L++ M  +    +  T+N  I  LC   R+     LL  M++    P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N  TYN L++G     +V  A +L+ E+   G+  N VT+N ++ G    G   EA ++ 
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M  +G     +++ +++   CK  + + A     R++  G      I+YT ++ G+C 
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR-ITYTGMIDGLCK 415

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +G + EA + L +M  +GI P+  T++ L+
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445


>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
           SV=1
          Length = 880

 Score =  247 bits (631), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 276/546 (50%), Gaps = 13/546 (2%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFY---RIRE-FGLKPTVKIYNHILDALLAENRFSMI 84
           +  V +++I    R    ++ LK+ Y    +RE FG +     Y+ +L +L   +   + 
Sbjct: 122 AHAVIVALIKECSRC--EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLA 179

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
              Y  M+ DG    +  Y  ++ ALCKN   + A   + ++   G   D+   T+++  
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239

Query: 145 ICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
            C+   + +A ++       V+       Y+ LI+GLC+  ++EEAF L  +M ++G  P
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           +  TY+ +I +LCD G ++ +  +  +M  RGC PN+H++T L+ G    G+  EA+ + 
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            +M+++   P+V+ Y+ LI+G C +G +  A  +   ME+ +C PNV T++ L++G  + 
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G    A  +  RM+ NG SP++V+Y  ++  LC+    + A+ L+  M   +  P+ +TF
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I   C  G+ D A   L  M +     +  T   L+DG+ +V + ++A  ++  + K
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             I     + N IL  + +   V E   +LGK+   G     +T+  ++    + G +  
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + ++L+ ++  G   P++  YT ++ G+C  G ++EA   L  M + G+ PN  T+ V+V
Sbjct: 600 SFRILELMKLSGCL-PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658

Query: 559 RSLFSN 564
           +   +N
Sbjct: 659 KGYVNN 664



 Score =  221 bits (562), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 252/514 (49%), Gaps = 9/514 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++M+ +G       + +++N+  + G  E A     +I + G      I   +L      
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243

Query: 79  NRFSMINPIYSNMKRD-GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                   ++  M ++    PN  +Y+IL+  LC+  R++ A+ L  +MG KGC P   +
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303

Query: 138 YTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           YT ++ ++C  G +++A  L            V  Y  LI+GLC++ KIEEA  +  +MV
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
              I P+VITY+ +I+  C  G V  +  +L  M  R C PN+ +F  L++G    G+ +
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A  L  RM+  G  P++V+Y+ LI GLC  G M+ A  +   M      P+  T++A+I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           + F K G    AS     M+  G S + V  T ++  +C+      A  ++E +      
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
               + N  +  L    +V   + +L ++ +   +P++ TY  L+DGL+R   +  +F +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           +  ++  G   N+  Y  I++G+C+ G V EA +LL  M   G   + +T+ +++  Y  
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663

Query: 493 QGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWG 525
            GK++ A++ +   +  G E N  I  Y+SLL G
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRI--YSSLLQG 695



 Score =  201 bits (511), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 257/548 (46%), Gaps = 37/548 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM  +G   S   +  +I +    GL ++A  +F  +   G KP V  Y  ++D L 
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +    N +   M +D + P+V TYN L+   CK+ RV  A++LL  M  + C P+  
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++  +C++G+  +A  L  R         +  YN LI+GLC+E  +  A+ LL  M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               I+P+ +T++ II++ C  G  + +   LG M  +G + +  + T+L+ G    G+T
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  +   +++   L    + + ++  L     + E +++  ++ +    P+V TY+ L
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  ++G++ G+ +I   M  +GC PNV  YT ++  LCQ     +A  L+  M     
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR------ 425
            PN VT+   +KG    G++D A++ +  M +     N   Y+ LL G +   +      
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707

Query: 426 ----------------VKEAFELVTEIEKC--GIQLNIVTYNTILHGVCRAGMVVEAFQL 467
                           + E   +V ++  C  G+ + +VT       +C+ G   E+  L
Sbjct: 708 ESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTR------LCKEGRTDESNDL 761

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           +  +L  G  L+    +II+ +YC + K    ++L+  +   G + P   S+  ++ G+ 
Sbjct: 762 VQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSG-FVPSFKSFCLVIQGLK 819

Query: 528 NSGGMQEA 535
             G  + A
Sbjct: 820 KEGDAERA 827



 Score =  148 bits (374), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/534 (22%), Positives = 244/534 (45%), Gaps = 31/534 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    +I+    + ++M  + +  S   + ++IN Y + G    A ++   + +  
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V+ +N +++ L    +      +   M  +G+ P++ +YN+L+  LC+   ++ AY
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVSVY----NALINGL 175
           KLL  M      PD +++T I+++ CK G+ + A   L +    G+S+       LI+G+
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K  +A ++L  +V   I     + + I+  L     V+  L +LG++   G  P++
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G +  G    +  +   M   G LPNV  Y+ +I+GLC  G ++EA  +   
Sbjct: 582 VTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK--VLCQN 353
           M+++   PN  TY+ ++ G+   G L  A +    M+  G   N   Y+ +++  VL Q 
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701

Query: 354 NMFHQAHSLIEKMAFENCPPNTVT-FNTFIKGLCGC---------------GRVDWAMKL 397
            + +   S +  +A     P  +    + ++ L GC               GR D +  L
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDL 761

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           +  + +          + +++      +  +  EL+T + K G   +  ++  ++ G+ +
Sbjct: 762 VQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC-----KQGKVNNAIQLLDRI 506
            G    A +L+ ++L     ++     ++ Y  C     + G  +  I L+D++
Sbjct: 821 EGDAERARELVMELLTSNGVVEK--SGVLTYVECLMEGDETGDCSEVIDLVDQL 872


>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
           mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
           SV=1
          Length = 602

 Score =  243 bits (621), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 272/532 (51%), Gaps = 8/532 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  +      P++  ++    A+    +F+++      ++ +G+  N++T NI+
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----- 161
           +   C+  +   AY +L ++   G  PD  ++ T++  +   G+V EA  L  R      
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN+++NG+C+      A  LL +M +R +  +V TYSTII SLC  G ++ ++ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G   ++ ++ SL++G    G+ ++ + L   M+    +PNV+ ++ L+    
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  +  +M      PN+ TY+ L+DG+     L  A+ + + M+ N CSP++V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +T ++K  C          +   ++      N VT++  ++G C  G++  A +L  +M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
             +  LP++ TY  LLDGL    ++++A E+  +++K  + L IV Y TI+ G+C+ G V
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A+ L   +  +G K + +T+ ++I   CK+G ++ A  LL ++   G   P+  +Y +
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNT 548

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           L+      G +  +   +++M + G   + ++  +++  L S  G L   ++
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS--GELDKSFL 598



 Score =  223 bits (569), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 244/474 (51%), Gaps = 5/474 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +Q+++ G++ +      +IN + R      A  +  ++ + G +P    +N ++  L  E
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            + S    +   M  +G +P+V TYN ++  +C++     A  LL +M  +    D  +Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 139 TTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           +TI+ S+C+ G ++ A    +E+  +   S V  YN+L+ GLCK  K  +   LL +MV 
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I PNVIT++ ++      G ++ +  +  +M  RG +PNI ++ +L+ GY +  R  E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+++ + M+R    P++V +++LI G C    +D+ + V   + +     N  TYS L+ 
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF ++G +  A +++  M+S+G  P+V+ Y  ++  LC N    +A  + E +       
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
             V + T I+G+C  G+V+ A  L   +      PN+ TY  ++ GL +   + EA  L+
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            ++E+ G   N  TYNT++    R G +  + +L+ +M   G   DA +  ++I
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  191 bits (484), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 208/402 (51%), Gaps = 1/402 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K ++A  L  EM+     P+++ +S   S++         L    Q+ + G   NI++  
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++  +    +T  A  +  ++++ G+ P+   ++TLI GL   G + EAV +  +M EN
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C P+V TY+++++G  ++G+   A  +  +M       +V  Y+ ++  LC++     A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL ++M  +    + VT+N+ ++GLC  G+ +    LL  M   E +PN+ T+N LLD 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
            ++  +++EA EL  E+   GI  NI+TYNT++ G C    + EA  +L  M+      D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +TF  +I  YC   +V++ +++   I   G    + ++Y+ L+ G C SG ++ A    
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRG-LVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           Q+M++ G+ P+  T+ +L+  L  N      + I +D+  +K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468



 Score =  189 bits (480), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 211/410 (51%), Gaps = 5/410 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G       + S++N   R G    AL +  ++ E  +K  V  Y+ I+D+L 
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++  M+  G++ +V TYN L++ LCK  + +    LL +M ++   P+ +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++    K G+++EA EL       G+S     YN L++G C ++++ EA  +L  M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V     P+++T++++I   C V  V+  + +   +  RG   N  +++ L++G+   G+ 
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L+  M+  G LP+V+ Y  L+ GLC NG +++A+ +   ++++     +  Y+ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  K G +  A  ++  +   G  PNV+ YT M+  LC+     +A+ L+ KM  +  
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            PN  T+NT I+     G +  + KL+++MK      + ++   ++D LL
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  170 bits (431), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 176/345 (51%), Gaps = 5/345 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L ++M+ +G+  S   + S++    + G       +   +    + P V  +N 
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +LD  + E +    N +Y  M   G+ PN+ TYN L+   C  NR+  A  +L  M    
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF 185
           C+PD V++T+++   C + +V++     R ++ R   +    Y+ L+ G C+  KI+ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EMV  G+ P+V+TY  ++  LCD G +E +L I   +     +  I  +T++++G 
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             GG+  +A +L+  +  +G  PNV+ Y+ +I GLC  GS+ EA  +  +MEE+   PN 
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            TY+ LI    + G+L  ++++   M S G S +  +   ++ +L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  154 bits (389), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 177/376 (47%), Gaps = 8/376 (2%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS-------FTSLLK 243
           M+ R I  N+     I   L   G++ T L      F   C  +  S       F   L+
Sbjct: 2   MIKRSITTNMKALRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLR 61

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
             ++  +  +A  L+  MIR   LP++V +S     +      +  +    Q+E N    
Sbjct: 62  SGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N+ T + +I+ F +      A  +  +++  G  P+   +  ++K L       +A  L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M    C P+ VT+N+ + G+C  G    A+ LL +M++     ++ TY+ ++D L R 
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +  A  L  E+E  GI+ ++VTYN+++ G+C+AG   +   LL  M+      + ITF
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N+++  + K+GK+  A +L   +   G  +P+II+Y +L+ G C    + EA   L  M+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 544 NEGICPNFATWNVLVR 559
                P+  T+  L++
Sbjct: 361 RNKCSPDIVTFTSLIK 376


>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
          Length = 1112

 Score =  243 bits (620), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 280/563 (49%), Gaps = 7/563 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L    +++ + Y+   M+   +      ++++  S    G  +QA     ++REFG
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                  YN ++  LL     +    +Y  M  +G  P++ TY+ L+  L K   +D   
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL EM   G  P+  ++T  +  + + G++ EA E+  R      G  V  Y  LI+ L
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   K++ A  +  +M      P+ +TY T++    D  ++++      +M   G  P++
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT L+      G   EA D  + M  +G LPN+  Y+TLI GL     +D+A+ +   
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME     P   TY   ID + K+G+ + A + + +M + G +PN+VA    +  L +   
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  +   +      P++VT+N  +K     G +D A+KLL +M +  C P++   N 
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++ L + +RV EA+++   +++  ++  +VTYNT+L G+ + G + EA +L   M+ +G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + ITFN +    CK  +V  A+++L ++   G   PD+ +Y ++++G+  +G ++EA
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-CVPDVFTYNTIIFGLVKNGQVKEA 662

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
             +  +M  + + P+F T   L+
Sbjct: 663 MCFFHQM-KKLVYPDFVTLCTLL 684



 Score =  214 bits (545), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/592 (26%), Positives = 262/592 (44%), Gaps = 80/592 (13%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            EID    LL +M   G      V  S+IN+  +    ++A KMF R++E  LKPTV  YN
Sbjct: 518  EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L  L    +      ++  M + G  PN  T+N L   LCKN+ V  A K+L +M + 
Sbjct: 578  TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637

Query: 130  GCA----------------------------------PDAVSYTTIVSSICKLGQVEEAR 155
            GC                                   PD V+  T++  + K   +E+A 
Sbjct: 638  GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAY 697

Query: 156  ELAMRF-----------------GS-------------------------GVSVYNALIN 173
            ++   F                 GS                         G S+   +I 
Sbjct: 698  KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757

Query: 174  GLCKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
              CK + +  A  L  +   D G+ P + TY+ +I  L +   +E +  +  Q+   GC 
Sbjct: 758  YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817

Query: 233  PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            P++ ++  LL  Y   G+  E  +L+  M       N + ++ +I GL   G++D+A+ +
Sbjct: 818  PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877

Query: 293  SYQ-MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
             Y  M +    P   TY  LIDG +K+G L  A Q++  M+  GC PN   Y  ++    
Sbjct: 878  YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937

Query: 352  QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
            +      A +L ++M  E   P+  T++  +  LC  GRVD  +    ++K+    P++ 
Sbjct: 938  KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997

Query: 412  TYNELLDGLLRVNRVKEAFELVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             YN +++GL + +R++EA  L  E++   GI  ++ TYN+++  +  AGMV EA ++  +
Sbjct: 998  CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057

Query: 471  MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            +   G + +  TFN +I  Y   GK  +A  +   +  GG ++P+  +Y  L
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG-FSPNTGTYEQL 1108



 Score =  199 bits (505), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 239/503 (47%), Gaps = 41/503 (8%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
           T N +L+AL  + +++    +   M  +    D  +Y TI  S+   G +++A   A+R 
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA-PYALRK 178

Query: 161 ---FGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              FG  ++ Y  N LI+ L K     EA  +   M+  G  P++ TYS+++  L    +
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +++ +G+L +M   G  PN+++FT  ++     G+ +EA ++  RM  EG  P+VV Y+ 
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI  LC+   +D A  V  +M+     P+  TY  L+D F+   +L    Q W+ M  +G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+VV +T +V  LC+   F +A   ++ M  +   PN  T+NT I GL    R+D A+
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +L   M+     P   TY   +D   +      A E   +++  GI  NIV  N  L+ +
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----- 510
            +AG   EA Q+   +   G   D++T+N+++  Y K G+++ AI+LL  +   G     
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538

Query: 511 -----------------------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
                                        +  P +++Y +LL G+  +G +QEA    + 
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           M+ +G  PN  T+N L   L  N
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKN 621



 Score =  134 bits (336), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 138/285 (48%), Gaps = 11/285 (3%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI---R 57
            +++  G+  +ID +  L ++M       +      VI+   + G  + AL ++Y +   R
Sbjct: 826  LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885

Query: 58   EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
            +F   PT   Y  ++D L    R      ++  M   G  PN   YNIL+    K    D
Sbjct: 886  DFS--PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943

Query: 118  GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALI 172
             A  L   M  +G  PD  +Y+ +V  +C +G+V+E     +EL        V  YN +I
Sbjct: 944  AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003

Query: 173  NGLCKEHKIEEAFWLLCEM-VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
            NGL K H++EEA  L  EM   RGI P++ TY+++I +L   G VE +  I  ++   G 
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063

Query: 232  NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             PN+ +F +L++GY L G+   A  ++  M+  GF PN   Y  L
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 96/188 (51%), Gaps = 1/188 (0%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
            T T N  ++ L   G+++    + D M++     +  TY  +   L     +K+A   +
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            ++ + G  LN  +YN ++H + ++    EA ++  +M++EG +    T++ ++    K+
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             +++ + LL  +   G   P++ ++T  +  +  +G + EA+  L++M +EG  P+  T
Sbjct: 237 RDIDSVMGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295

Query: 554 WNVLVRSL 561
           + VL+ +L
Sbjct: 296 YTVLIDAL 303


>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
           OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
          Length = 780

 Score =  243 bits (620), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 282/595 (47%), Gaps = 55/595 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L E    D     L+++K  GVS     F  +I++Y ++G+AE+A++ F R++EF 
Sbjct: 98  VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157

Query: 61  LKPTVKIYNHILDALLAENRFSMI------------------------------------ 84
            +P V  YN IL  ++ E  F M+                                    
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             ++ +M   G+ PN  TY IL+  LC+    D A KL  EM   G  PD+V++  ++  
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277

Query: 145 ICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            CKLG++ EA EL   F       G+  Y++LI+GL +  +  +AF L   M+ + I P+
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           +I Y+ +I  L   G +E +L +L  M  +G +P+ + + +++K     G   E   L  
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M      P+   ++ LI  +C NG + EA  +  ++E++ C P+V T++ALIDG  K+G
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTC----MVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            L  A  + ++M     +   +  +         + ++    +A+  +   A     P+ 
Sbjct: 458 ELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V++N  I G C  G +D A+KLL+ ++     P+  TYN L++GL RV R +EAF+L   
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF-- 575

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
             K   + +   Y +++   CR   V+ AF L  K L + + LD  T N I   + K+G+
Sbjct: 576 YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KEGE 634

Query: 496 VNNAIQL---LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              A++    LD  +      P    YT  L G+C SG   EA +    +  + I
Sbjct: 635 TERALRRLIELDTRKDELTLGP----YTIWLIGLCQSGRFHEALMVFSVLREKKI 685



 Score =  190 bits (483), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 247/536 (46%), Gaps = 62/536 (11%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           + +++  L ++N  D  ++ L E+ + G + D+  +  ++S+  K+G  E+A E   R  
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 163 S-----GVSVYNALINGLCKEHKIEEAFWLLC-----EMVDRGIDPNVITYSTIISSLCD 212
                  V  YN ++  + +E    E F++L      EM+     PN+ T+  ++  L  
Sbjct: 155 EFDCRPDVFTYNVILRVMMRE----EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G    +  +   M  RG +PN  ++T L+ G    G   +A  L+  M   G  P+ VA
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           ++ L+ G C  G M EA  +    E++     +  YS+LIDG  +A     A +++  M+
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                P+++ YT +++ L +      A  L+  M  +   P+T  +N  IK LCG G ++
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
               L  +M + E  P+  T+  L+  + R   V+EA E+ TEIEK G   ++ T+N ++
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450

Query: 453 HGVCRAGMVVEAFQLLGKMLI--------------------------------------- 473
            G+C++G + EA  LL KM +                                       
Sbjct: 451 DGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD 510

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G+  D +++N++I  +C+ G ++ A++LL+ ++  G  +PD ++Y +L+ G+   G  +
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKG-LSPDSVTYNTLINGLHRVGREE 569

Query: 534 EAF--IYLQKMLNE--GICPNFATWNVLVRSLFSN----LGHLGPVYILDDIMANK 581
           EAF   Y +        +  +  TW+   R +       + +L  +  LDD  AN+
Sbjct: 570 EAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE 625



 Score =  150 bits (378), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 236/514 (45%), Gaps = 16/514 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K      Q +   M   G+S +   +  +I+   + G A+ A K+FY ++  G
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N +LD      R      +    ++DG    +  Y+ L+  L +  R   A+
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           +L   M  K   PD + YT ++  + K G++E+A +L     S G+S     YNA+I  L
Sbjct: 324 ELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL 383

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    +EE   L  EM +    P+  T++ +I S+C  G V  +  I  ++   GC+P++
Sbjct: 384 CGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSV 443

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI--REGFLPNVVAYS--TLIHGLCSNGSMDEAVS 291
            +F +L+ G    G   EA  L ++M   R   L   +++S       +  +GS+ +A  
Sbjct: 444 ATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYR 503

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
                 +    P++ +Y+ LI+GF +AG++ GA ++ N +   G SP+ V Y  ++  L 
Sbjct: 504 DLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLH 563

Query: 352 QNNMFHQAHSLI-EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL-LDQMKQYECLPN 409
           +     +A  L   K  F + P     + + +   C   +V  A  L +  +K+  CL +
Sbjct: 564 RVGREEEAFKLFYAKDDFRHSP---AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDD 620

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
             T NE ++   +    + A   + E++    +L +  Y   L G+C++G   EA  +  
Sbjct: 621 -ETANE-IEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFS 678

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +  +   +   +   +I+  CK+ +++ AI++ 
Sbjct: 679 VLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712


>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
           SV=1
          Length = 741

 Score =  238 bits (608), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 267/534 (50%), Gaps = 13/534 (2%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC 111
           + Y  +++G  P  ++++     L+          ++  M   G+  +V + N+ L  L 
Sbjct: 164 LVYTYKDWGSDP--RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLS 221

Query: 112 KN-NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGV 165
           K+  +   A  +  E    G   +  SY  ++  +C+LG+++EA  L +      +   V
Sbjct: 222 KDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDV 281

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y+ ++NG C+  ++++ + L+  M  +G+ PN   Y +II  LC +  +  +     +
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +G  P+   +T+L+ G+   G    AS  +  M      P+V+ Y+ +I G C  G 
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           M EA  + ++M      P+  T++ LI+G+ KAG++  A ++ N MI  GCSPNVV YT 
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+      A+ L+ +M      PN  T+N+ + GLC  G ++ A+KL+ + +   
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
              +  TY  L+D   +   + +A E++ E+   G+Q  IVT+N +++G C  GM+ +  
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWNPDIISYTSLL 523
           +LL  ML +G   +A TFN ++  YC +  +  A  +   +  RG G   PD  +Y +L+
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG---PDGKTYENLV 638

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
            G C +  M+EA+   Q+M  +G   + +T++VL++        L    + D +
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692



 Score =  237 bits (604), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 240/467 (51%), Gaps = 5/467 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+ +F    E G+   V  YN ++  +    R    + +   M+  G  P+V +Y+ ++ 
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS---SICKLGQVEEARELAMRFG--S 163
             C+   +D  +KL+  M  KG  P++  Y +I+     ICKL + EEA    +R G   
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
              VY  LI+G CK   I  A     EM  R I P+V+TY+ IIS  C +G++  +  + 
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +MF +G  P+  +FT L+ GY   G   +A  + N MI+ G  PNVV Y+TLI GLC  
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G +D A  + ++M +    PN+ TY+++++G  K+GN+  A ++     + G + + V Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T ++   C++    +A  ++++M  +   P  VTFN  + G C  G ++   KLL+ M  
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               PN TT+N L+      N +K A  +  ++   G+  +  TY  ++ G C+A  + E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           A+ L  +M  +G  +   T++++I  + K+ K   A ++ D++R  G
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696



 Score =  217 bits (552), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 231/476 (48%), Gaps = 5/476 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           VI+   ++G  ++A  +   +   G  P V  Y+ +++          +  +   MKR G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           ++PN + Y  ++  LC+  ++  A +   EM  +G  PD V YTT++   CK G +  A 
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +      S      V  Y A+I+G C+   + EA  L  EM  +G++P+ +T++ +I+  
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G+++ +  +   M   GC+PN+ ++T+L+ G    G    A++L + M + G  PN+
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+++++GLC +G+++EAV +  + E      +  TY+ L+D + K+G +  A +I   
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+  G  P +V +  ++   C + M      L+  M  +   PN  TFN+ +K  C    
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A  +   M      P+  TY  L+ G  +   +KEA+ L  E++  G  +++ TY+ 
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           ++ G  +    +EA ++  +M  EG   D   F+       K  + +  +  +D I
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727



 Score =  216 bits (549), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 215/437 (49%), Gaps = 5/437 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            I    +LL  M+++G +     + +V+N Y R G  ++  K+   ++  GLKP   IY 
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+  L    + +     +S M R G+ P+   Y  L+   CK   +  A K   EM ++
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEA 184
              PD ++YT I+S  C++G + EA +L    F  G+      +  LING CK   +++A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F +   M+  G  PNV+TY+T+I  LC  G+++++  +L +M+  G  PNI ++ S++ G
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   EA  L       G   + V Y+TL+   C +G MD+A  +  +M      P 
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ L++GF   G L    ++ N M++ G +PN   +  +VK  C  N    A ++ +
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M      P+  T+   +KG C    +  A  L  +MK      +++TY+ L+ G L+  
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680

Query: 425 RVKEAFELVTEIEKCGI 441
           +  EA E+  ++ + G+
Sbjct: 681 KFLEAREVFDQMRREGL 697



 Score =  178 bits (451), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 187/398 (46%), Gaps = 5/398 (1%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C++   +    +M  +G+     V+ ++I+ + + G    A K FY +    + P V  Y
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             I+              ++  M   G+EP+  T+  L+   CK   +  A+++   M  
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEE 183
            GC+P+ V+YTT++  +CK G ++ A EL      +     +  YN+++NGLCK   IEE
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ E    G++ + +TY+T++ + C  G ++ +  IL +M  +G  P I +F  L+ 
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G+ L G   +   L N M+ +G  PN   +++L+   C   ++  A ++   M      P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY  L+ G  KA N+  A  ++  M   G S +V  Y+ ++K   +   F +A  + 
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           ++M  E    +   F+ F        R D  +  +D++
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727



 Score =  158 bits (399), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 171/344 (49%), Gaps = 5/344 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ +I        +M    ++     + ++I+ + ++G   +A K+F+ +   G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P    +  +++             ++++M + G  PNV TY  L+  LCK   +D A 
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           +LL EM   G  P+  +Y +IV+ +CK G +EEA +L   F +         Y  L++  
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A  +L EM+ +G+ P ++T++ +++  C  G +E    +L  M  +G  PN 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F SL+K Y +      A+ ++  M   G  P+   Y  L+ G C   +M EA  +  +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           M+      +V+TYS LI GF K    L A +++++M   G + +
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700


>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
           mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
           SV=1
          Length = 590

 Score =  238 bits (607), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 248/492 (50%), Gaps = 6/492 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L +QM+  G+S +   +   IN + R      AL +  ++ + G
Sbjct: 81  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P++   N +L+     NR S    +   M   G +P+  T+  L+  L ++N+   A 
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            L+  M  KGC PD V+Y  +++ +CK G+ + A  L  +   G     V +YN +I+GL
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++AF L  +M  +GI P+V TY+ +IS LC+ G    +  +L  M  +  NP++
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             F +L+  ++  G+  EA  L++ M++     P+VVAY+TLI G C    ++E + V  
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +     N  TY+ LI GF +A +   A  ++ +M+S+G  P+++ Y  ++  LC N 
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A  + E M   +   + VT+ T I+ LC  G+V+    L   +      PN+ TY 
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++ G  R    +EA  L  E+++ G   N  TYNT++    R G    + +L+ +M   
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560

Query: 475 GTKLDAITFNII 486
           G   DA TF ++
Sbjct: 561 GFAGDASTFGLV 572



 Score =  225 bits (573), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 259/513 (50%), Gaps = 12/513 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  ++ +L A+   N+F ++  +   M+  G+  N++TY+I +   C+ +++  A  +
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+  ++++  C   ++ EA  L      M +      +  L++GL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV +G  P+++TY  +I+ LC  G  + +L +L +M       ++  
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +++ G        +A DL+N+M  +G  P+V  Y+ LI  LC+ G   +A  +   M 
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI-SNGCSPNVVAYTCMVKVLCQNNMF 356
           E +  P++  ++ALID F K G L+ A ++++ M+ S  C P+VVAY  ++K  C+    
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +   +  +M+      NTVT+ T I G       D A  +  QM      P+I TYN L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           LDGL     V+ A  +   ++K  ++L+IVTY T++  +C+AG V + + L   + ++G 
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           K + +T+  ++  +C++G    A  L   ++  G   P+  +Y +L+      G    + 
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRARLRDGDEAASA 551

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
             +++M + G   + +T+      L +N+ H G
Sbjct: 552 ELIKEMRSCGFAGDASTF-----GLVTNMLHDG 579



 Score =  209 bits (532), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 254/511 (49%), Gaps = 8/511 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++++  ++   +  + +  +++  G+   +  Y+  ++     ++ S+   I   M 
Sbjct: 78  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G  P++ T N LL   C  NR+  A  L+ +M   G  PD V++TT+V  + +  +  
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197

Query: 153 EARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EA  L  R         +  Y A+INGLCK  + + A  LL +M    I+ +V+ Y+TII
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             LC   +++ +  +  +M  +G  P++ ++  L+      GR  +AS L + M+ +   
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           P++V ++ LI      G + EA  +  +M +   C P+V  Y+ LI GF K   +    +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M   G   N V YT ++    Q      A  + ++M  +   P+ +T+N  + GLC
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G V+ A+ + + M++ +   +I TY  +++ L +  +V++ ++L   +   G++ N+V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY T++ G CR G+  EA  L  +M  +G   ++ T+N +I A  + G    + +L+  +
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           R  G +  D  ++  L+  + + G + ++F+
Sbjct: 558 RSCG-FAGDASTF-GLVTNMLHDGRLDKSFL 586



 Score =  176 bits (447), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 179/347 (51%)

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ ++G+ G M      P+I  F+ LL       +      L  +M   G   N+  YS 
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            I+  C    +  A+++  +M +    P++ T ++L++GF     +  A  + ++M+  G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+ V +T +V  L Q+N   +A +L+E+M  + C P+ VT+   I GLC  G  D A+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            LL++M++ +   ++  YN ++DGL +   + +AF+L  ++E  GI+ ++ TYN ++  +
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C  G   +A +LL  ML +    D + FN +I A+ K+GK+  A +L D +       PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +++Y +L+ G C    ++E     ++M   G+  N  T+  L+   F
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402



 Score =  162 bits (410), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 200/389 (51%), Gaps = 2/389 (0%)

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           ++ K+++A  L  +MV     P+++ +S ++S++  +   +  + +  QM   G + N++
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +++  +  +    +   A  +  +M++ G+ P++V  ++L++G C    + EAV++  QM
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            E    P+  T++ L+ G  +      A  +  RM+  GC P++V Y  ++  LC+    
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A +L+ KM       + V +NT I GLC    +D A  L ++M+     P++ TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +  L    R  +A  L++++ +  I  ++V +N ++    + G +VEA +L  +M+    
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 477 KL-DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D + +N +I  +CK  +V   +++   +   G    + ++YT+L+ G   +     A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNA 410

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +  ++M+++G+ P+  T+N+L+  L +N
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNN 439



 Score =  161 bits (407), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 185/356 (51%), Gaps = 6/356 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ E D    LL +M+   +     ++ ++I+   +    + A  +F ++   G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V  YN ++  L    R+S  + + S+M    + P++  +N L+ A  K  ++  A 
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340

Query: 121 KLLVEM-GNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALING 174
           KL  EM  +K C PD V+Y T++   CK  +VEE     RE++ R   G +V Y  LI+G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             +    + A  +  +MV  G+ P+++TY+ ++  LC+ GNVET+L +   M  R    +
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I ++T++++     G+  +  DL+  +  +G  PNVV Y+T++ G C  G  +EA ++  
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           +M+E+   PN  TY+ LI    + G+   ++++   M S G + +   +  +  +L
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576


>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
           OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
          Length = 704

 Score =  237 bits (605), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 265/519 (51%), Gaps = 15/519 (2%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNH--ILDALLAENRFSMINPIYSNMKRDGMEP 98
           R+ G A   L +  + R F       +YNH  +L  L           +   M+R+ + P
Sbjct: 121 RKTGFAFGVLALMLK-RGFAFN----VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           +VF+YN +++  C+   ++ A +L  EM   GC+   V++  ++ + CK G+++EA    
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 155 RELA-MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           +E+  M   + + VY +LI G C   +++    L  E+++RG  P  ITY+T+I   C +
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G ++ +  I   M  RG  PN++++T L+ G    G+T EA  L N MI +   PN V Y
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + +I+ LC +G + +AV +   M++    P+  TY+ L+ G    G+L  AS++   M+ 
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 334 NG--CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +     P+V++Y  ++  LC+ N  HQA  + + +  +    + VT N  +      G V
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + AM+L  Q+   + + N  TY  ++DG  +   +  A  L+ ++    +Q ++  YN +
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L  +C+ G + +A++L  +M  +    D ++FNI+I    K G + +A  LL  +   G 
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG- 594

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            +PD+ +Y+ L+      G + EA  +  KM++ G  P+
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633



 Score =  234 bits (598), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 248/497 (49%), Gaps = 9/497 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M + G   NV+ +NILLK LC+N     A  LL EM      PD  SY T++   C+  +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 151 VEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +E+A ELA    GSG S     +  LI+  CK  K++EA   L EM   G++ +++ Y++
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   CD G ++    +  ++  RG +P   ++ +L++G+   G+  EAS+++  MI  G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNV  Y+ LI GLC  G   EA+ +   M E    PN  TY+ +I+   K G +  A 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN--CPPNTVTFNTFIK 383
           +I   M      P+ + Y  ++  LC      +A  L+  M  ++    P+ +++N  I 
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC   R+  A+ + D + +     +  T N LL+  L+   V +A EL  +I    I  
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N  TY  ++ G C+ GM+  A  LL KM +   +     +N ++ + CK+G ++ A +L 
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + ++    + PD++S+  ++ G   +G ++ A   L  M   G+ P+  T++ L+   F 
Sbjct: 553 EEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR-FL 610

Query: 564 NLGHLGPVYILDDIMAN 580
            LG+L       D M +
Sbjct: 611 KLGYLDEAISFFDKMVD 627



 Score =  208 bits (530), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 246/497 (49%), Gaps = 7/497 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+   +      + +VI  +      E+AL++   ++  G   ++  +  ++DA  
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +          MK  G+E ++  Y  L++  C    +D    L  E+  +G +P A+
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CKLGQ++EA E+       GV      Y  LI+GLC   K +EA  LL  M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++  +PN +TY+ II+ LC  G V  ++ I+  M  R   P+  ++  LL G    G  
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 252 HEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            EAS L   M+++     P+V++Y+ LIHGLC    + +A+ +   + E     +  T +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L++   KAG++  A ++W ++  +    N   YT M+   C+  M + A  L+ KM   
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+   +N  +  LC  G +D A +L ++M++    P++ ++N ++DG L+   +K A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L+  + + G+  ++ TY+ +++   + G + EA     KM+  G + DA   + ++  
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 490 YCKQGKVNNAIQLLDRI 506
              QG+ +   +L+ ++
Sbjct: 644 CISQGETDKLTELVKKL 660



 Score =  184 bits (467), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 210/410 (51%), Gaps = 7/410 (1%)

Query: 157 LAMRFGSGVSVYNA--LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           L ++ G   +VYN   L+ GLC+  +  +A  LL EM    + P+V +Y+T+I   C+  
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +E +L +  +M   GC+ ++ ++  L+  +   G+  EA      M   G   ++V Y+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +LI G C  G +D   ++  ++ E    P   TY+ LI GF K G L  AS+I+  MI  
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  PNV  YT ++  LC      +A  L+  M  ++  PN VT+N  I  LC  G V  A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTYNTIL 452
           +++++ MK+    P+  TYN LL GL     + EA +L+  + K       ++++YN ++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-E 511
           HG+C+   + +A  +   ++ +    D +T NI++ +  K G VN A++L  +I      
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            N D  +YT+++ G C +G +  A   L KM    + P+   +N L+ SL
Sbjct: 492 RNSD--TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539



 Score =  182 bits (463), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 200/393 (50%), Gaps = 1/393 (0%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L+  L +    E AF    +M++     N ++ S ++     +     + G+L  M  
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG   N+++   LLKG        +A  L   M R   +P+V +Y+T+I G C    +++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ ++ +M+ + C  ++ T+  LID F KAG +  A      M   G   ++V YT +++
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C      +  +L +++      P  +T+NT I+G C  G++  A ++ + M +    P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N+ TY  L+DGL  V + KEA +L+  + +   + N VTYN I++ +C+ G+V +A +++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD-RIRGGGEWNPDIISYTSLLWGIC 527
             M    T+ D IT+NI++   C +G ++ A +LL   ++     +PD+ISY +L+ G+C
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
               + +A      ++ +    +  T N+L+ S
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468



 Score =  153 bits (386), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 207/465 (44%), Gaps = 7/465 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +  ++D     L++MK  G+     V+ S+I  +   G  ++   +F  + E G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++       +    + I+  M   G+ PNV+TY  L+  LC   +   A 
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
           +LL  M  K   P+AV+Y  I++ +CK G V +A E+       R       YN L+ GL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 176 CKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           C +  ++EA  LL  M+      DP+VI+Y+ +I  LC    +  +L I   +  +    
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +   LL   L  G  ++A +LW ++     + N   Y+ +I G C  G ++ A  + 
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M  +   P+V  Y+ L+    K G+L  A +++  M  +   P+VV++  M+    + 
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A SL+  M+     P+  T++  I      G +D A+   D+M      P+    
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           + +L   +      +  ELV ++    I L+     T++  +C +
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682



 Score =  120 bits (302), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           A + L+  L  + + + A S   +M E     N  + S L++ + +      A  +   M
Sbjct: 74  AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALM 133

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +  G + NV  +  ++K LC+N    +A SL+ +M   +  P+  ++NT I+G C    +
Sbjct: 134 LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A++L ++MK   C  ++ T+  L+D   +  ++ EA   + E++  G++ ++V Y ++
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G C  G +     L  ++L  G    AIT+N +I  +CK G++  A ++ + +   G 
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG- 312

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             P++ +YT L+ G+C  G  +EA   L  M+ +   PN  T+N+++  L
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362


>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
           SV=1
          Length = 718

 Score =  236 bits (601), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 271/528 (51%), Gaps = 11/528 (2%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           Y +  +AE+ L  F ++   G  P+V+  N +L  L      +  + +Y  M   G+ P 
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA- 158
           V T+N +L +  K   ++   K+ +EM  +      V+Y  +++   K G++EEAR    
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 159 --MRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
              R G  V+ Y  N LI G CK+   ++A+ +  EM++ GI P   TY+  I +LCD G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ +  +L  M      P++ S+ +L+ GY+  G+  EAS L++ +      P++V Y+
Sbjct: 358 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI GLC +G+++ A  +  +M      P+V TY+ L+ GF K GNL  A+++++ M+  
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGCGRVDW 393
           G  P+  AYT       +     +A  L E+M A ++  P+   +N  I GLC  G +  
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A++   ++ +   +P+  TY  ++ G L   + K A  L  E+ +  +  +++TY  +++
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G  +AG + +AFQ   +M   G + + +T N ++Y  CK G ++ A + L ++   G   
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-IP 652

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P+  SYT L+   C+    +E     ++ML++ I P+  T   L + L
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700



 Score =  213 bits (541), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 250/490 (51%), Gaps = 3/490 (0%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           + M   G+  +   F ++++S  + G  E+  K++  ++   ++ +   YN +++     
Sbjct: 227 ETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKN 286

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +       + +M+R G     +++N L++  CK    D A+ +  EM N G  P   +Y
Sbjct: 287 GKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTY 346

Query: 139 TTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
              + ++C  G++++AREL     +  V  YN L++G  K  K  EA  L  ++    I 
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+++TY+T+I  LC+ GN+E +  +  +M  +   P++ ++T+L+KG++  G    A+++
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFA 316
           ++ M+R+G  P+  AY+T   G    G  D+A  +  +M   +   P++T Y+  IDG  
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K GNL+ A +   ++   G  P+ V YT +++   +N  F  A +L ++M  +   P+ +
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+   I G    GR++ A +   +MK+    PN+ T+N LL G+ +   + EA+  + ++
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ GI  N  +Y  ++   C      E  +L  +ML +  + D  T    ++ + ++   
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHR-ALFKHLEKDHE 705

Query: 497 NNAIQLLDRI 506
           +  ++ L+R+
Sbjct: 706 SREVEFLERL 715



 Score =  175 bits (444), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 215/458 (46%), Gaps = 10/458 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   +  +++ V  +  +MK   +  SE  +  +IN + + G  E+A +    +R  G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              T   +N +++    +  F     +   M   G+ P   TYNI + ALC   R+D A 
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGL 175
           +LL  M     APD VSY T++    K+G+  EA  L   +R G     +  YN LI+GL
Sbjct: 364 ELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +E A  L  EM  + I P+VITY+T++      GN+  +  +  +M  +G  P+ 
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +++T+   G L  G + +A  L   M+  +   P++  Y+  I GLC  G++ +A+    
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++      P+  TY+ +I G+ + G    A  +++ M+     P+V+ Y  ++    +  
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              QA     +M      PN +T N  + G+C  G +D A + L +M++    PN  +Y 
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            L+       + +E  +L  E+    I+ +  T+  + 
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697



 Score =  148 bits (373), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 168/383 (43%), Gaps = 5/383 (1%)

Query: 183 EAFWLLCE-MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E F L  E M+ +G  P+V   + ++  L D   +  +  +   M   G  P + +F ++
Sbjct: 185 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 244

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L      G       +W  M R     + V Y+ LI+G   NG M+EA      M  +  
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 304

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
                +++ LI+G+ K G    A  + + M++ G  P    Y   +  LC       A  
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+  MA     P+ V++NT + G    G+   A  L D ++  +  P+I TYN L+DGL 
Sbjct: 365 LLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
               ++ A  L  E+    I  +++TY T++ G  + G +  A ++  +ML +G K D  
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            +        + G  + A +L + +       PD+  Y   + G+C  G + +A  + +K
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           +   G+ P+  T+  ++R    N
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLEN 563


>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
           mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
           SV=1
          Length = 528

 Score =  233 bits (594), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 236/463 (50%), Gaps = 9/463 (1%)

Query: 42  RVGLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           R GL++     A+ +F  + +    P++  ++ +L A+   N+F ++      M+  G+ 
Sbjct: 51  RTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGIS 110

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            N++TYNIL+   C+ +R+  A  LL +M   G  PD V+  ++++  C   ++ +A  L
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170

Query: 158 A-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                 M +      +  LI+GL   +K  EA  L+  MV RG  P+++TY  +++ LC 
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G+ + +L +L +M       N+  +++++          +A +L+  M  +G  PNV+ 
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS+LI  LC+ G   +A  +   M E    PN+ T+SALID F K G L+ A +++  MI
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                PN+  Y+ ++   C  +   +A  ++E M  ++C PN VT+NT I G C   RVD
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             M+L  +M Q   + N  TY  L+ G  +      A  +  ++   G+  NI+TYN +L
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
            G+C+ G + +A  +   +     + D  T+NI+I   CK GK
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  216 bits (550), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 221/432 (51%), Gaps = 5/432 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V    ++M++ G+S +   +  +IN + R      AL +  ++ + G
Sbjct: 84  LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +   N +L+     NR S    +   M   G +P+  T+  L+  L  +N+   A 
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  +GC PD V+Y  +V+ +CK G  + A  L     A +  + V +Y+ +I+ L
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK    ++A  L  EM ++G+ PNVITYS++IS LC+ G    +  +L  M  R  NPN+
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F++L+  ++  G+  +A  L+  MI+    PN+  YS+LI+G C    + EA  +   
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PNV TY+ LI+GF KA  +    +++  M   G   N V YT ++    Q   
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M      PN +T+N  + GLC  G++  AM + + +++    P+I TYN 
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503

Query: 416 LLDGLLRVNRVK 427
           +++G+ +  + K
Sbjct: 504 MIEGMCKAGKWK 515



 Score =  210 bits (535), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 241/470 (51%), Gaps = 14/470 (2%)

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           + Y  +L+    +  +D A  L   M      P  + ++ ++S+I K+ + +    L + 
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD----LVIS 99

Query: 161 FGSGVSV---------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           FG  + +         YN LIN  C+  ++  A  LL +M+  G +P+++T +++++  C
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
               +  ++ ++ QM   G  P+  +FT+L+ G  L  +  EA  L +RM++ G  P++V
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 219

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y  +++GLC  G  D A+++  +ME      NV  YS +ID   K  +   A  ++  M
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            + G  PNV+ Y+ ++  LC    +  A  L+  M      PN VTF+  I      G++
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A KL ++M +    PNI TY+ L++G   ++R+ EA +++  + +     N+VTYNT+
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           ++G C+A  V +  +L  +M   G   + +T+  +I+ + +    +NA  +  ++   G 
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG- 458

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +P+I++Y  LL G+C +G + +A +  + +    + P+  T+N+++  +
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508



 Score = 57.4 bits (137), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 36/172 (20%)

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A+ L   M Q    P+I  +++LL  + ++N+         ++E  GI  N+ TYN 
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++  CR   +  A  LLGKM+  G                                   
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLG----------------------------------- 143

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            + PDI++  SLL G C+   + +A   + +M+  G  P+  T+  L+  LF
Sbjct: 144 -YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194


>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
           mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
           SV=2
          Length = 548

 Score =  231 bits (590), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 230/453 (50%), Gaps = 6/453 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---- 161
           L K   ++ +++ A  L  +M      P  V +  ++S+I KL + +    L  +     
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 162 -GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
             + +  +N +IN  C   ++  A  +L +M+  G +P+ +T  ++++  C    V  ++
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            ++ +M   G  P+I ++ +++       R ++A D +  + R+G  PNVV Y+ L++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C++    +A  +   M +    PNV TYSAL+D F K G +L A +++  M+     P++
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y+ ++  LC ++   +A+ + + M  + C  + V++NT I G C   RV+  MKL  +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M Q   + N  TYN L+ G  +   V +A E  ++++  GI  +I TYN +L G+C  G 
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A  +   M      LD +T+  +I   CK GKV  A  L   +   G   PDI++YT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-LKPDIVTYT 474

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           +++ G+C  G + E      KM  EG+  N  T
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  225 bits (574), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 224/418 (53%), Gaps = 5/418 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A++   ++ ++  +   M+  G+  +++T+NI++   C   +V  A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCK 177
           L +M   G  PD V+  ++V+  C+  +V +A  L  +     +   +  YNA+I+ LCK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             ++ +AF    E+  +GI PNV+TY+ +++ LC+      +  +L  M  +   PN+ +
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++LL  ++  G+  EA +L+  M+R    P++V YS+LI+GLC +  +DEA  +   M 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C  +V +Y+ LI+GF KA  +    +++  M   G   N V Y  +++   Q     
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A     +M F    P+  T+N  + GLC  G ++ A+ + + M++ E   +I TY  ++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            G+ +  +V+EA+ L   +   G++ +IVTY T++ G+C  G++ E   L  KM  EG
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500



 Score =  215 bits (547), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 215/394 (54%), Gaps = 1/394 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M   GI  ++ T++ +I+  C    V  +L ILG+M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+  +  SL+ G+    R  +A  L ++M+  G+ P++VAY+ +I  LC    ++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A     ++E     PNV TY+AL++G   +     A+++ + MI    +PNV+ Y+ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
               +N    +A  L E+M   +  P+ VT+++ I GLC   R+D A ++ D M    CL
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            ++ +YN L++G  +  RV++  +L  E+ + G+  N VTYNT++ G  +AG V +A + 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M   G   D  T+NI++   C  G++  A+ + + ++   E + DI++YT+++ G+C
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMC 446

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +G ++EA+     +  +G+ P+  T+  ++  L
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480



 Score =  199 bits (505), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 196/385 (50%), Gaps = 16/385 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++N + R      A+ +  ++ E G KP +  YN I+D+L    R +     +  ++R 
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ PNV TY  L+  LC ++R   A +LL +M  K   P+ ++Y+ ++ +  K G+V EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +EL      M     +  Y++LINGLC   +I+EA  +   MV +G   +V++Y+T+I+ 
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C    VE  + +  +M  RG   N  ++ +L++G+   G   +A + +++M   G  P+
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +  Y+ L+ GLC NG +++A+ +   M++     ++ TY+ +I G  K G +  A  ++ 
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT--------F 381
            +   G  P++V YT M+  LC   + H+  +L  KM  E    N  T +          
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 519

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYEC 406
           IK +  CG   +A  LL  +K   C
Sbjct: 520 IKKMLSCG---YAPSLLKDIKSGVC 541



 Score =  191 bits (486), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 219/461 (47%), Gaps = 38/461 (8%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L ++M+V G+      F  VIN +        AL +  ++ + G +P       +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++     NR S    +   M   G +P++  YN ++ +LCK  RV+ A+    E+  KG 
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            P+ V+YT +V                              NGLC   +  +A  LL +M
Sbjct: 222 RPNVVTYTALV------------------------------NGLCNSSRWSDAARLLSDM 251

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + + I PNVITYS ++ +    G V  +  +  +M     +P+I +++SL+ G  L  R 
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ +++ M+ +G L +VV+Y+TLI+G C    +++ + +  +M +     N  TY+ L
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF +AG++  A + +++M   G SP++  Y  ++  LC N    +A  + E M     
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + VT+ T I+G+C  G+V+ A  L   +      P+I TY  ++ GL     + E   
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           L T++++ G+  N  T +         G +  + +L+ KML
Sbjct: 492 LYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKML 524



 Score =  176 bits (445), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 205/399 (51%), Gaps = 1/399 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           SG  +   L     ++ K+ +A  L  +MV     P+++ ++ ++S++  +   +  + +
Sbjct: 48  SGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISL 107

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M V G   ++++F  ++  +    +   A  +  +M++ G+ P+ V   +L++G C 
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              + +AVS+  +M E    P++  Y+A+ID   K   +  A   +  +   G  PNVV 
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT +V  LC ++ +  A  L+  M  +   PN +T++  +      G+V  A +L ++M 
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    P+I TY+ L++GL   +R+ EA ++   +   G   ++V+YNT+++G C+A  V 
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +  +L  +M   G   + +T+N +I  + + G V+ A +   ++   G  +PDI +Y  L
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNIL 406

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L G+C++G +++A +  + M    +  +  T+  ++R +
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445



 Score =  152 bits (385), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 176/349 (50%), Gaps = 2/349 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I  F  LL   +   +      L  +M   G   ++  ++ +I+  C    +  A+S+
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P+  T  +L++GF +   +  A  + ++M+  G  P++VAY  ++  LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
               + A    +++  +   PN VT+   + GLC   R   A +LL  M + +  PN+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ LLD  ++  +V EA EL  E+ +  I  +IVTY+++++G+C    + EA Q+   M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G   D +++N +I  +CK  +V + ++L   +   G    + ++Y +L+ G   +G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG-LVSNTVTYNTLIQGFFQAGDV 381

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            +A  +  +M   GI P+  T+N+L+  L  N G L    ++ + M  +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDN-GELEKALVIFEDMQKR 429



 Score =  147 bits (371), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 180/346 (52%), Gaps = 13/346 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++      ++++ +G+  +   + +++N          A ++   + +  
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ +LDA +   +      ++  M R  ++P++ TY+ L+  LC ++R+D A 
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           ++   M +KGC  D VSY T+++  CK  +VE+     RE++ R   S    YN LI G 
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +++A     +M   GI P++ TY+ ++  LCD G +E +L I   M  R  + +I
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T++++G    G+  EA  L+  +  +G  P++V Y+T++ GLC+ G + E  ++  +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           M++     N  T S         G++  ++++  +M+S G +P+++
Sbjct: 496 MKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  140 bits (353), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 161/322 (50%), Gaps = 1/322 (0%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L K  L   + ++A DL++ M++    P++V ++ L+  +      D  +S+  +ME   
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ T++ +I+ F     +  A  I  +M+  G  P+ V    +V   C+ N    A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL++KM      P+ V +N  I  LC   RV+ A     ++++    PN+ TY  L++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
              +R  +A  L++++ K  I  N++TY+ +L    + G V+EA +L  +M+      D 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T++ +I   C   +++ A Q+ D +   G    D++SY +L+ G C +  +++     +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCL-ADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 541 KMLNEGICPNFATWNVLVRSLF 562
           +M   G+  N  T+N L++  F
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFF 376



 Score = 95.1 bits (235), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 106/192 (55%), Gaps = 1/192 (0%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +++ A+ L   M +    P+I  +N LL  ++++ +      L  ++E  GI+ ++ T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +++  C    V  A  +LGKML  G + D +T   ++  +C++ +V++A+ L+D++   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + PDI++Y +++  +C +  + +AF + +++  +GI PN  T+  LV  L ++     
Sbjct: 185 G-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 570 PVYILDDIMANK 581
              +L D++  K
Sbjct: 244 AARLLSDMIKKK 255


>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
           OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
          Length = 819

 Score =  231 bits (588), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/599 (24%), Positives = 289/599 (48%), Gaps = 42/599 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG++  +     +   ++ +G S     + S+I+++   G   +A+ +F ++ E G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238

Query: 61  LKPTVKIYNHILDAL-LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            KPT+  YN IL+        ++ I  +   MK DG+ P+ +TYN L+    + +    A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALING 174
            ++  EM   G + D V+Y  ++    K  + +EA     E+ +  F   +  YN+LI+ 
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             ++  ++EA  L  +M ++G  P+V TY+T++S     G VE+++ I  +M   GC PN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +F + +K Y   G+  E   +++ +   G  P++V ++TL+     NG   E   V  
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P   T++ LI  +++ G+   A  ++ RM+  G +P++  Y  ++  L +  
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG--------------------------- 387
           M+ Q+  ++ +M    C PN +T+ + +                                
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 388 -----CGRVDW---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
                C + D    A +   ++K+    P+ITT N ++    R   V +A  ++  +++ 
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   ++ TYN++++   R+    ++ ++L ++L +G K D I++N +IYAYC+  ++ +A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            ++   +R  G   PD+I+Y + +         +EA   ++ M+  G  PN  T+N +V
Sbjct: 719 SRIFSEMRNSG-IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776



 Score =  189 bits (479), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 262/581 (45%), Gaps = 48/581 (8%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           K E  S     F+  +  +++  LA +A   F + +++       +   I+  L  E R 
Sbjct: 130 KPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRV 189

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
           S    +++ ++ DG   +V++Y  L+ A   + R   A  +  +M   GC P  ++Y  I
Sbjct: 190 SSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVI 249

Query: 142 VSSICKLGQ--------VEEARELAMRFGSGVSVYNALINGLCKEHKI-EEAFWLLCEMV 192
           ++   K+G         VE+ +   +        YN LI   CK   + +EA  +  EM 
Sbjct: 250 LNVFGKMGTPWNKITSLVEKMKSDGI--APDAYTYNTLIT-CCKRGSLHQEAAQVFEEMK 306

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G   + +TY+ ++         + ++ +L +M + G +P+I ++ SL+  Y   G   
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA +L N+M  +G  P+V  Y+TL+ G    G ++ A+S+  +M    C PN+ T++A I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             +   G      +I++ +   G SP++V +  ++ V  QN M  +   + ++M      
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P   TFNT I     CG  + AM +  +M      P+++TYN +L  L R    +++ ++
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546

Query: 433 VTEIEKCGIQLNIVTYNTILHG----------------------------------VC-R 457
           + E+E    + N +TY ++LH                                   VC +
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
             ++ EA +   ++   G   D  T N ++  Y ++  V  A  +LD ++  G + P + 
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG-FTPSMA 665

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +Y SL++    S    ++   L+++L +GI P+  ++N ++
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706



 Score =  182 bits (462), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 240/534 (44%), Gaps = 40/534 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           +  L+++MK +G++     + ++I   +R  L ++A ++F  ++  G       YN +LD
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                +R      + + M  +G  P++ TYN L+ A  ++  +D A +L  +M  KG  P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNALINGLCKEHKIEEAFWLL 188
           D  +YTT++S   + G+VE A  +   MR       +  +NA I       K  E   + 
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E+   G+ P+++T++T+++     G      G+  +M   G  P   +F +L+  Y   
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   +A  ++ RM+  G  P++  Y+T++  L   G  +++  V  +ME+  C PN  TY
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562

Query: 309 SALIDGFA-----------------------------------KAGNLLGASQIWNRMIS 333
            +L+  +A                                   K   L  A + ++ +  
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G SP++     MV +  +  M  +A+ +++ M      P+  T+N+ +           
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           + ++L ++      P+I +YN ++    R  R+++A  + +E+   GI  +++TYNT + 
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
                 M  EA  ++  M+  G + +  T+N I+  YCK  + + A   ++ +R
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796



 Score =  151 bits (382), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 3/321 (0%)

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR   A++++N +  +GF  +V +Y++LI    ++G   EAV+V  +MEE+ C P + TY
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246

Query: 309 SALIDGFAKAGNLLGA-SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           + +++ F K G      + +  +M S+G +P+   Y  ++    + ++  +A  + E+M 
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                 + VT+N  +       R   AMK+L++M      P+I TYN L+    R   + 
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA EL  ++ + G + ++ TY T+L G  RAG V  A  +  +M   G K +  TFN  I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             Y  +GK    +++ D I   G  +PDI+++ +LL     +G   E     ++M   G 
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCG-LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485

Query: 548 CPNFATWNVLVRSLFSNLGHL 568
            P   T+N L+ S +S  G  
Sbjct: 486 VPERETFNTLI-SAYSRCGSF 505



 Score =  124 bits (312), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 182/400 (45%), Gaps = 9/400 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    + ++M+  G   +   F + I  Y   G   + +K+F  I   GL P +  +N
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L         S ++ ++  MKR G  P   T+N L+ A  +    + A  +   M + 
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEA 184
           G  PD  +Y T+++++ + G  E++ ++      G        Y +L++      +I   
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578

Query: 185 FWLLCEMVDRGIDPNVITYST--IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
             L  E+    I+P  +   T  ++ S CD+  +  +     ++  RG +P+I +  S++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL--LPEAERAFSELKERGFSPDITTLNSMV 636

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             Y       +A+ + + M   GF P++  Y++L++    +    ++  +  ++      
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P++ +Y+ +I  + +   +  AS+I++ M ++G  P+V+ Y   +     ++MF +A  +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           +  M    C PN  T+N+ + G C   R D A   ++ ++
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796



 Score =  122 bits (307), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/371 (22%), Positives = 171/371 (46%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            I+  G + +   +  +  ++ V G+S     + +++  + + G+  +   +F  ++  G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + +N ++ A      F     +Y  M   G+ P++ TYN +L AL +    + + 
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGL 175
           K+L EM +  C P+ ++Y +++ +     ++     LA    SGV      +   L+   
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   + EA     E+ +RG  P++ T ++++S       V  + G+L  M  RG  P++
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+  +       ++ ++   ++ +G  P++++Y+T+I+  C N  M +A  +  +
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   P+V TY+  I  +A       A  +   MI +GC PN   Y  +V   C+ N 
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784

Query: 356 FHQAHSLIEKM 366
             +A   +E +
Sbjct: 785 KDEAKLFVEDL 795


>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
           SV=1
          Length = 527

 Score =  229 bits (583), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 254/503 (50%), Gaps = 34/503 (6%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +AL +F  + E    P++  +  +L+ +    +F ++  +  +++  G+  +++T N+L+
Sbjct: 55  EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV 167
              C++++   A   L +M   G  PD V++T+                           
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTS--------------------------- 147

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
              LING C  +++EEA  ++ +MV+ GI P+V+ Y+TII SLC  G+V  +L +  QM 
Sbjct: 148 ---LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P++  +TSL+ G    GR  +A  L   M +    P+V+ ++ LI      G   
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A  +  +M   S  PN+ TY++LI+GF   G +  A Q++  M + GC P+VVAYT ++
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+      A  +  +M+ +    NT+T+ T I+G    G+ + A ++   M      
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384

Query: 408 PNITTYNELLDGLLRVNRVKEA---FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           PNI TYN LL  L    +VK+A   FE + + E  G+  NI TYN +LHG+C  G + +A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +   M      +  IT+ III   CK GKV NA+ L   +   G   P++++YT+++ 
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG-VKPNVVTYTTMIS 503

Query: 525 GICNSGGMQEAFIYLQKMLNEGI 547
           G+   G   EA +  +KM  +G+
Sbjct: 504 GLFREGLKHEAHVLFRKMKEDGV 526



 Score =  214 bits (545), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 232/452 (51%), Gaps = 9/452 (1%)

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALIN 173
           A  L   M      P  + +T +++ I K+ + +    L      M     +   N L+N
Sbjct: 56  ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
             C+  +   A   L +M+  G +P+++T++++I+  C    +E ++ ++ QM   G  P
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++  +T+++      G  + A  L+++M   G  P+VV Y++L++GLC++G   +A S+ 
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M +    P+V T++ALID F K G  L A +++N MI    +PN+  YT ++   C  
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  +   M  + C P+ V + + I G C C +VD AMK+  +M Q     N  TY
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA---FQLLGK 470
             L+ G  +V +   A E+ + +   G+  NI TYN +LH +C  G V +A   F+ + K
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
             ++G   +  T+N++++  C  GK+  A+ + + +R   E +  II+YT ++ G+C +G
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR-KREMDIGIITYTIIIQGMCKAG 474

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++ A      + ++G+ PN  T+  ++  LF
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506



 Score =  182 bits (461), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 185/358 (51%), Gaps = 8/358 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ QM   G+     ++ ++I+S  + G    AL +F ++  +G++P V +Y  +++ L 
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+   + +   M +  ++P+V T+N L+ A  K  +   A +L  EM     AP+  
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT++++  C  G V+EAR++     +      V  Y +LING CK  K+++A  +  EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G+  N ITY+T+I     VG    +  +   M  RG  PNI ++  LL      G+ 
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403

Query: 252 HEASDLWNRMIR---EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            +A  ++  M +   +G  PN+  Y+ L+HGLC NG +++A+ V   M +      + TY
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           + +I G  KAG +  A  ++  + S G  PNVV YT M+  L +  + H+AH L  KM
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521



 Score =  177 bits (450), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 206/397 (51%), Gaps = 5/397 (1%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L NGL    +  EA  L   MV+    P++I ++ +++ +  +   +  + +   + + G
Sbjct: 44  LRNGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            + ++++   L+  +    + + AS    +M++ GF P++V +++LI+G C    M+EA+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S+  QM E    P+V  Y+ +ID   K G++  A  ++++M + G  P+VV YT +V  L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C +  +  A SL+  M      P+ +TFN  I      G+   A +L ++M +    PNI
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY  L++G      V EA ++   +E  G   ++V Y ++++G C+   V +A ++  +
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M  +G   + IT+  +I  + + GK N A ++   +   G   P+I +Y  LL  +C +G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNG 401

Query: 531 GMQEA---FIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +++A   F  +QK   +G+ PN  T+NVL+  L  N
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438



 Score =  143 bits (361), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++  +L+  L   + +EA DL+  M+    LP+++ ++ L++ +      D  +++   +
Sbjct: 39  NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +      ++ T + L++ F ++     AS    +M+  G  P++V +T ++   C  N  
Sbjct: 99  QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A S++ +M      P+ V + T I  LC  G V++A+ L DQM+ Y   P++  Y  L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++GL    R ++A  L+  + K  I+ +++T+N ++    + G  ++A +L  +M+    
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+  +I  +C +G V+ A Q+   +   G + PD+++YTSL+ G C    + +A 
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAM 337

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
               +M  +G+  N  T+  L++      G +G   +  ++ ++
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQG----FGQVGKPNVAQEVFSH 377


>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
           SV=1
          Length = 504

 Score =  228 bits (580), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 228/453 (50%), Gaps = 6/453 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
           Y  +L+   +  ++D +  L   M      P    ++ ++S+I K+ + +    L     
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +     +   N L+N  C+  ++  A   L +M+  G +P+++T+ ++++  C    V 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +  QM   G  PN+  + +++ G     +   A DL NRM ++G  P+VV Y++LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GLCS+G   +A  +   M +    P+V T++ALID   K G +  A + +  MI     
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P++V Y+ ++  LC  +   +A  +   M  + C P+ VT++  I G C   +V+  MKL
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M Q   + N  TY  L+ G  R  ++  A E+   +  CG+  NI+TYN +LHG+C 
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G + +A  +L  M   G   D +T+NIII   CK G+V +A  +   +   G   PDI 
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG-LMPDIW 467

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           +YT+++ G+   G  +EA    +KM  +GI PN
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  223 bits (569), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 231/434 (53%), Gaps = 5/434 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + +L +F+ + +    P++  ++ +L A+    ++ ++  ++  M+  G+  N+ T NIL
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRF 161
           L   C+ +++  A   L +M   G  P  V++ ++++  C+  +V +A     + + M +
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V +YN +I+GLCK  +++ A  LL  M   GI P+V+TY+++IS LC  G    +  
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           ++  M  R   P++ +F +L+   +  GR  EA + +  MIR    P++V YS LI+GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +DEA  +   M    C P+V TYS LI+G+ K+  +    +++  M   G   N V
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT +++  C+    + A  +  +M F    PN +T+N  + GLC  G+++ A+ +L  M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           ++     +I TYN ++ G+ +   V +A+++   +   G+  +I TY T++ G+ + G+ 
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482

Query: 462 VEAFQLLGKMLIEG 475
            EA  L  KM  +G
Sbjct: 483 READALFRKMKEDG 496



 Score =  208 bits (530), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 217/400 (54%), Gaps = 1/400 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           ++ ++ L++ + K  K +   +L  +M   GI  N+ T + +++  C    +  +L  LG
Sbjct: 81  IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG 140

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M   G  P+I +F SLL G+  G R ++A  ++++M+  G+ PNVV Y+T+I GLC + 
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D A+ +  +ME++   P+V TY++LI G   +G    A+++ + M      P+V  + 
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++    +     +A    E+M   +  P+ VT++  I GLC   R+D A ++   M   
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C P++ TY+ L++G  +  +V+   +L  E+ + G+  N VTY  ++ G CRAG +  A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            ++  +M+  G   + IT+N++++  C  GK+  A+ +L  ++  G  + DI++Y  ++ 
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG-MDADIVTYNIIIR 439

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G+C +G + +A+     +  +G+ P+  T+  ++  L+  
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479



 Score =  192 bits (489), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 183/348 (52%), Gaps = 5/348 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F S++N + R      AL MF ++   G KP V IYN I+D L    +      + + M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           ++DG+ P+V TYN L+  LC + R   A +++  M  +   PD  ++  ++ +  K G+V
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA E     +       +  Y+ LI GLC   +++EA  +   MV +G  P+V+TYS +
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C    VE  + +  +M  RG   N  ++T L++GY   G+ + A +++ RM+  G 
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN++ Y+ L+HGLC NG +++A+ +   M++N    ++ TY+ +I G  KAG +  A  
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           I+  +   G  P++  YT M+  L +  +  +A +L  KM  +   PN
Sbjct: 453 IYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  191 bits (485), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 209/417 (50%), Gaps = 5/417 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++++  ++   +  + ++ +++  G+   +   N +L+     ++ S+       M 
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EP++ T+  LL   C+ +RV  A  +  +M   G  P+ V Y TI+  +CK  QV+
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203

Query: 153 EARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +L  R      G  V  YN+LI+GLC   +  +A  ++  M  R I P+V T++ +I
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +    G V  +     +M  R  +P+I +++ L+ G  +  R  EA +++  M+ +G  
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+VV YS LI+G C +  ++  + +  +M +     N  TY+ LI G+ +AG L  A +I
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           + RM+  G  PN++ Y  ++  LC N    +A  ++  M       + VT+N  I+G+C 
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            G V  A  +   +     +P+I TY  ++ GL +    +EA  L  ++++ GI  N
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  179 bits (453), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 205/401 (51%), Gaps = 2/401 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           + +G      L NG+ +  K++++  L   MV     P++  +S ++S++  +   +  +
Sbjct: 43  YSNGSDYREMLRNGI-RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI 101

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM + G   N+ +   LL  +    +   A     +MI+ G  P++V + +L++G 
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    + +A+ +  QM      PNV  Y+ +IDG  K+  +  A  + NRM  +G  P+V
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++  LC +  +  A  ++  M      P+  TFN  I      GRV  A +  ++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +    P+I TY+ L+ GL   +R+ EA E+   +   G   ++VTY+ +++G C++  
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           V    +L  +M   G   + +T+ I+I  YC+ GK+N A ++  R+   G  +P+II+Y 
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG-VHPNIITYN 400

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            LL G+C++G +++A + L  M   G+  +  T+N+++R +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441



 Score =  170 bits (431), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 181/348 (52%), Gaps = 1/348 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I  F+ LL       +      LW +M   G   N+   + L++  C    +  A+S 
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P++ T+ +L++GF +   +  A  ++++M+  G  PNVV Y  ++  LC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +     A  L+ +M  +   P+ VT+N+ I GLC  GR   A +++  M + E  P++ T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           +N L+D  ++  RV EA E   E+ +  +  +IVTY+ +++G+C    + EA ++ G M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G   D +T++I+I  YCK  KV + ++L   +   G    + ++YT L+ G C +G +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR-NTVTYTILIQGYCRAGKL 377

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             A    ++M+  G+ PN  T+NVL+  L  N      + IL D+  N
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425



 Score =  160 bits (406), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 163/332 (49%), Gaps = 11/332 (3%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           Y+  QM   G   +  ++ ++I+   +    + AL +  R+ + G+ P V  YN ++  L
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
            +  R+S    + S M +  + P+VFT+N L+ A  K  RV  A +   EM  +   PD 
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALINGLCKEHKIEEAFWL 187
           V+Y+ ++  +C   +++EA E+   FG  VS         Y+ LING CK  K+E    L
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEM---FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
            CEM  RG+  N +TY+ +I   C  G +  +  I  +M   G +PNI ++  LL G   
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G+  +A  +   M + G   ++V Y+ +I G+C  G + +A  +   +      P++ T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           Y+ ++ G  K G    A  ++ +M  +G  PN
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  151 bits (382), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 160/309 (51%), Gaps = 5/309 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D    LL +M+ +G+      + S+I+     G    A +M   + +  
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++DA + E R S     Y  M R  ++P++ TY++L+  LC  +R+D A 
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           ++   M +KGC PD V+Y+ +++  CK  +VE   +L               Y  LI G 
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  +   MV  G+ PN+ITY+ ++  LCD G +E +L IL  M   G + +I
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  +++G    G   +A D++  +  +G +P++  Y+T++ GL   G   EA ++  +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491

Query: 296 MEENSCPPN 304
           M+E+   PN
Sbjct: 492 MKEDGILPN 500



 Score = 90.1 bits (222), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 94/175 (53%), Gaps = 1/175 (0%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++D ++ L   M Q   LP+I  ++ LL  + ++ +      L  +++  GI  N+ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +L+  CR   +  A   LGKM+  G +   +TF  ++  +C+  +V +A+ + D++ G 
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G + P+++ Y +++ G+C S  +  A   L +M  +GI P+  T+N L+  L S+
Sbjct: 181 G-YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234


>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
           SV=2
          Length = 940

 Score =  226 bits (577), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 165/590 (27%), Positives = 278/590 (47%), Gaps = 46/590 (7%)

Query: 9   CE-IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFY-RIREFGLKPTVK 66
           CE + G    L  M   GV     ++ S+I+ +   GL    + + Y ++   G+ P V 
Sbjct: 73  CERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVF 132

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
             N ++ +     R S      S ++   +  +  TYN ++  LC++   D AY+ L EM
Sbjct: 133 ALNVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 189

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAF 185
              G  PD VSY T++   CK+G    A+ L        +  +  L++     H IEEA+
Sbjct: 190 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 249

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +MV  G DP+V+T+S+II+ LC  G V     +L +M      PN  ++T+L+   
Sbjct: 250 R---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 306

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                   A  L+++M+  G   ++V Y+ L+ GL   G + EA      + E++  PNV
Sbjct: 307 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 366

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+AL+DG  KAG+L  A  I  +M+     PNVV Y+ M+    +  M  +A SL+ K
Sbjct: 367 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 426

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  +N  PN  T+ T I GL   G+ + A++L  +M+      N    + L++ L R+ R
Sbjct: 427 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 486

Query: 426 VKEAFELVTEIEKCGIQL-----------------------------------NIVTYNT 450
           +KE   LV ++   G+ L                                   ++V+YN 
Sbjct: 487 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 546

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G+ + G V   +   G M  +G + D  TFNI++ +  KQG     ++L D+++  G
Sbjct: 547 LISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 605

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
              P ++S   ++  +C +G M+EA   L +M+   I PN  T+ + + +
Sbjct: 606 -IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 654



 Score =  196 bits (499), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/558 (24%), Positives = 261/558 (46%), Gaps = 10/558 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+   V  +   + ++++S  +  +   AL ++ ++   G+   + +Y  ++D L 
Sbjct: 283 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 342

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  +  D   PNV TY  L+  LCK   +  A  ++ +M  K   P+ V
Sbjct: 343 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 402

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +Y+++++   K G +EEA  L  +      V     Y  +I+GL K  K E A  L  EM
Sbjct: 403 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 462

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G++ N      +++ L  +G ++   G++  M  +G   +  ++TSL+  +  GG  
Sbjct: 463 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 522

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ-MEENSCPPNVTTYSA 310
             A      M   G   +VV+Y+ LI G+   G +      +Y+ M E    P++ T++ 
Sbjct: 523 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV--GADWAYKGMREKGIEPDIATFNI 580

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +++   K G+  G  ++W++M S G  P++++   +V +LC+N    +A  ++ +M    
Sbjct: 581 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 640

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+  F+       R D   K  + +  Y    +   YN L+  L ++   K+A 
Sbjct: 641 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 700

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++ ++E  G   + VT+N+++HG      V +A      M+  G   +  T+N II   
Sbjct: 701 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 760

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G +    + L  ++  G   PD  +Y +L+ G    G M+ +     +M+ +G+ P 
Sbjct: 761 SDAGLIKEVDKWLSEMKSRG-MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPK 819

Query: 551 FATWNVLVRSLFSNLGHL 568
            +T+NVL+ S F+N+G +
Sbjct: 820 TSTYNVLI-SEFANVGKM 836



 Score =  179 bits (453), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 250/553 (45%), Gaps = 44/553 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM V G+     V+  +++   + G   +A K F  + E    P V  Y  ++D L 
Sbjct: 318 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 377

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S    I + M    + PNV TY+ ++    K   ++ A  LL +M ++   P+  
Sbjct: 378 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 437

Query: 137 SYTTIVSSICKLGQVEEARELA--MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           +Y T++  + K G+ E A EL+  MR   GV     + +AL+N L +  +I+E   L+ +
Sbjct: 438 TYGTVIDGLFKAGKEEMAIELSKEMRL-IGVEENNYILDALVNHLKRIGRIKEVKGLVKD 496

Query: 191 MV-----------------------------------DRGIDPNVITYSTIISSLCDVGN 215
           MV                                   +RG+  +V++Y+ +IS +   G 
Sbjct: 497 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 556

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V       G M  +G  P+I +F  ++      G +     LW++M   G  P++++ + 
Sbjct: 557 VGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 615

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++  LC NG M+EA+ +  QM      PN+TTY   +D  +K        +    ++S G
Sbjct: 616 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 675

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
              +   Y  ++  LC+  M  +A  ++  M      P+TVTFN+ + G      V  A+
Sbjct: 676 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 735

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                M +    PN+ TYN ++ GL     +KE  + ++E++  G++ +  TYN ++ G 
Sbjct: 736 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 795

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            + G +  +  +  +M+ +G      T+N++I  +   GK+  A +LL  + G    +P+
Sbjct: 796 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM-GKRGVSPN 854

Query: 516 IISYTSLLWGICN 528
             +Y +++ G+C 
Sbjct: 855 TSTYCTMISGLCK 867



 Score =  171 bits (433), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 202/407 (49%), Gaps = 16/407 (3%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           ++++G   E+ G   L++ M  +GV+  +  + S+I+ + + G  E AL     ++E G+
Sbjct: 481 LKRIGRIKEVKG---LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 537

Query: 62  KPTVKIYNHILDALLAENRFSMINP--IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
              V  YN ++  +L   +F  +     Y  M+  G+EP++ T+NI++ +  K    +G 
Sbjct: 538 PWDVVSYNVLISGML---KFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 594

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALING 174
            KL  +M + G  P  +S   +V  +C+ G++EEA     + + M     ++ Y   ++ 
Sbjct: 595 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 654

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             K  + +  F     ++  GI  +   Y+T+I++LC +G  + +  ++G M  RG  P+
Sbjct: 655 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 714

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +F SL+ GY +G    +A   ++ M+  G  PNV  Y+T+I GL   G + E      
Sbjct: 715 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 774

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P+  TY+ALI G AK GN+ G+  I+  MI++G  P    Y  ++       
Sbjct: 775 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 834

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG-CGR--VDWAMKLL 398
              QA  L+++M      PNT T+ T I GLC  C    V+W  K +
Sbjct: 835 KMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAM 881



 Score =  155 bits (393), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 224/499 (44%), Gaps = 45/499 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   ++++ QM  + V  +   + S+IN Y + G+ E+A+ +  ++ +  
Sbjct: 372 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 431

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  ++D L    +  M   +   M+  G+E N +  + L+  L +  R+    
Sbjct: 432 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 491

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALIN 173
            L+ +M +KG   D ++YT+++    K G  E A       +E  M +   V  YN LI+
Sbjct: 492 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWD--VVSYNVLIS 549

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS------------------------ 209
           G+ K  K+  A W    M ++GI+P++ T++ +++S                        
Sbjct: 550 GMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 608

Query: 210 -----------LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
                      LC+ G +E ++ IL QM +   +PN+ ++   L       R        
Sbjct: 609 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH 668

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             ++  G   +   Y+TLI  LC  G   +A  V   ME     P+  T+++L+ G+   
Sbjct: 669 ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG 728

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
            ++  A   ++ M+  G SPNV  Y  +++ L    +  +    + +M      P+  T+
Sbjct: 729 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTY 788

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I G    G +  +M +  +M     +P  +TYN L+     V ++ +A EL+ E+ K
Sbjct: 789 NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 848

Query: 439 CGIQLNIVTYNTILHGVCR 457
            G+  N  TY T++ G+C+
Sbjct: 849 RGVSPNTSTYCTMISGLCK 867



 Score =  105 bits (262), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 144/303 (47%), Gaps = 18/303 (5%)

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP-----NVTTYSALIDGFAKAGN 320
           FL N  ++S++        S + ++S++ +  +    P      V+ +  L   +     
Sbjct: 17  FLSNCRSFSSIKRPQIPE-SEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCER 75

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI-EKMAFENCPPNTVTFN 379
           L GA++  + M + G  P+   +  ++     N + H   SLI  KM      P+    N
Sbjct: 76  LYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALN 135

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I   C  GR+ +A+ LL   +      +  TYN ++ GL       EA++ ++E+ K 
Sbjct: 136 VLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 192

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  + V+YNT++ G C+ G  V A  L+     E ++L+ IT  I++ +Y     +  A
Sbjct: 193 GILPDTVSYNTLIDGFCKVGNFVRAKALVD----EISELNLITHTILLSSYYNLHAIEEA 248

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +  D +  G  ++PD+++++S++  +C  G + E  + L++M    + PN  T+  LV 
Sbjct: 249 YR--DMVMSG--FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 304

Query: 560 SLF 562
           SLF
Sbjct: 305 SLF 307


>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
           SV=1
          Length = 816

 Score =  225 bits (574), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 247/516 (47%), Gaps = 6/516 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A  +F+ +R  G+ P+      +LD L+   +F +   ++ N+      P+ F Y   +
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 186

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFG 162
           +A  K + V    +L   M +    P    Y  ++  +CK  ++ +A +L     A R  
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +  YN LI+G CK    E++F +   M    I+P++IT++T++  L   G VE +  +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M   G  P+  +F+ L  GY    +   A  ++   +  G   N    S L++ LC 
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +++A  +  +       PN   Y+ +IDG+ + G+L+GA      M   G  P+ +A
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y C+++  C+      A   + KM  +   P+  T+N  I G       D    +L +M+
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               +PN+ +Y  L++ L + +++ EA  +  ++E  G+   +  YN ++ G C  G + 
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +AF+   +ML +G +L+ +T+N +I      GK++ A  LL  I   G   PD+ +Y SL
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG-LKPDVFTYNSL 605

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + G   +G +Q      ++M   GI P   T+++L+
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641



 Score =  223 bits (568), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 247/516 (47%), Gaps = 10/516 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           + L++F R++   + P+V IYN ++D L    R +    ++  M    + P++ TYN L+
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFG 162
              CK    + ++K+   M      P  +++ T++  + K G VE+A  +      + F 
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                ++ L +G     K E A  +    VD G+  N  T S ++++LC  G +E +  I
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           LG+   +G  PN   + +++ GY   G    A      M ++G  P+ +AY+ LI   C 
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G M+ A     +M+     P+V TY+ LI G+ +         I   M  NG  PNVV+
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++  LC+ +   +A  +   M      P    +N  I G C  G+++ A +   +M 
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +     N+ TYN L+DGL    ++ EA +L+ EI + G++ ++ TYN+++ G   AG V 
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
               L  +M   G K    T++++I    K+G     I+L +R+ G     PD++ Y  +
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLKPDLLVYNGV 671

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           L      G M++AF   ++M+ + I  +  T+N L+
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707



 Score =  179 bits (453), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 230/503 (45%), Gaps = 9/503 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  + +L++MK  G       F  + + Y     AE AL ++    + G+K      + 
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+AL  E +      I       G+ PN   YN ++   C+   + GA   +  M  +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
             PD ++Y  ++   C+LG++E A +   +         V  YN LI G  ++++ ++ F
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L EM D G  PNV++Y T+I+ LC    +  +  +   M  RG +P +  +  L+ G 
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+  +A      M+++G   N+V Y+TLI GL   G + EA  +  ++      P+V
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY++LI G+  AGN+     ++  M  +G  P +  Y  ++  LC          L  +
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGE 658

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M+ +   P+ + +N  +      G ++ A  L  QM +     + TTYN L+ G L+V +
Sbjct: 659 MSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + E   L+ E+    ++    TYN I+ G C     + A+    +M  +G  LD    N 
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775

Query: 486 IIYAYCKQGKVNNAIQLLDRIRG 508
           ++    ++ +   A  ++  + G
Sbjct: 776 LVSGLKEEWRSKEAEIVISEMNG 798



 Score =  162 bits (410), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 214/442 (48%), Gaps = 11/442 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ +I+  + +L +   +G+  +E ++ ++I+ Y R G    A      + + G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP    YN ++                + MK  G+ P+V TYNIL+    +    D  +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            +L EM + G  P+ VSY T+++ +CK  ++ EA    R++  R     V +YN LI+G 
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C + KIE+AF    EM+ +GI+ N++TY+T+I  L   G +  +  +L ++  +G  P++
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ GY   G       L+  M R G  P +  Y  LI  LC+     E + ++ +
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTK----EGIELTER 654

Query: 296 M-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +  E S  P++  Y+ ++  +A  G++  A  +  +MI      +   Y  ++    +  
Sbjct: 655 LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +  SLI++M      P   T+N  +KG C       A     +M++   L ++   N
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGN 774

Query: 415 ELLDGLLRVNRVKEAFELVTEI 436
           EL+ GL    R KEA  +++E+
Sbjct: 775 ELVSGLKEEWRSKEAEIVISEM 796


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.138    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,440,061
Number of Sequences: 539616
Number of extensions: 8887662
Number of successful extensions: 32609
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 17855
Number of HSP's gapped (non-prelim): 3541
length of query: 581
length of database: 191,569,459
effective HSP length: 123
effective length of query: 458
effective length of database: 125,196,691
effective search space: 57340084478
effective search space used: 57340084478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)