Query 008023
Match_columns 580
No_of_seqs 232 out of 391
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 16:16:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008023.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008023hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7y_A E3 ubiquitin-protein li 97.8 0.00033 1.1E-08 63.2 13.4 124 334-464 21-153 (153)
2 2dmh_A Myoferlin; beta-sandwic 97.7 0.00067 2.3E-08 60.1 13.4 122 334-468 8-137 (140)
3 1v27_A Regulating synaptic mem 97.4 0.0013 4.4E-08 58.1 12.1 105 334-448 22-137 (141)
4 2d8k_A Synaptotagmin VII; exoc 97.4 0.0013 4.5E-08 58.6 11.1 105 335-448 28-139 (141)
5 3m7f_B E3 ubiquitin-protein li 97.4 0.002 6.7E-08 59.8 12.7 126 334-465 9-142 (176)
6 2b3r_A Phosphatidylinositol-4- 97.3 0.002 6.9E-08 57.3 11.8 103 335-446 22-132 (134)
7 3kwu_A MUNC13-1; calcium bindi 97.3 0.0057 1.9E-07 54.7 14.6 122 333-463 17-146 (148)
8 1rlw_A Phospholipase A2, CALB 97.3 0.0041 1.4E-07 53.9 12.9 111 335-464 5-125 (126)
9 3n5a_A Synaptotagmin-7; calciu 97.3 0.0013 4.5E-08 57.7 9.8 105 334-444 17-138 (138)
10 3f04_A Synaptotagmin-1; C2A, c 97.2 0.002 6.8E-08 57.4 10.6 101 335-444 36-142 (143)
11 3fbk_A RGS3, RGP3, regulator o 97.2 0.0015 5.1E-08 59.3 9.9 106 335-447 29-140 (153)
12 1a25_A CALB, protein kinase C 97.2 0.0021 7.3E-08 57.8 10.8 101 335-445 33-140 (149)
13 3fdw_A Synaptotagmin-like prot 97.2 0.00098 3.3E-08 60.0 8.2 108 335-451 25-141 (148)
14 2cm5_A Rabphilin-3A; protein t 97.2 0.0018 6.2E-08 59.4 10.1 106 335-447 39-162 (166)
15 1w15_A Synaptotagmin IV; metal 97.2 0.0015 5E-08 59.1 9.3 105 334-445 31-153 (153)
16 1wfj_A Putative elicitor-respo 97.1 0.0017 6E-08 57.1 9.1 117 334-465 11-131 (136)
17 2ep6_A MCTP2 protein; beta san 97.1 0.0054 1.8E-07 54.0 12.2 114 335-462 15-130 (133)
18 1tjx_A Similar to synaptotagmi 97.1 0.0028 9.5E-08 57.7 10.1 105 334-445 26-148 (159)
19 3pyc_A E3 ubiquitin-protein li 97.0 0.0073 2.5E-07 53.0 12.1 124 333-461 5-130 (132)
20 3rdl_A Protein kinase C alpha 97.0 0.004 1.4E-07 54.6 10.3 103 335-447 18-127 (137)
21 1rsy_A Synaptotagmin I; calciu 97.0 0.0041 1.4E-07 56.2 10.6 99 335-444 44-150 (152)
22 2enp_A B/K protein; C2 type 1, 97.0 0.0036 1.2E-07 56.0 10.1 103 334-447 27-144 (147)
23 1gmi_A Protein kinase C, epsil 97.0 0.0068 2.3E-07 53.7 11.7 115 334-464 7-133 (136)
24 2dmg_A KIAA1228 protein; beta- 97.0 0.003 1E-07 56.1 9.2 107 335-448 26-139 (142)
25 2fk9_A Protein kinase C, ETA t 96.9 0.0052 1.8E-07 57.2 10.6 103 334-445 30-146 (157)
26 2q3x_A Regulating synaptic mem 96.9 0.0027 9.3E-08 58.9 8.7 106 334-448 31-143 (171)
27 2bwq_A Regulating synaptic mem 96.9 0.0052 1.8E-07 53.4 10.0 98 335-442 20-128 (129)
28 2r83_A Synaptotagmin-1; C2A-C2 96.9 0.015 5.2E-07 57.3 14.4 123 334-465 20-148 (284)
29 2nq3_A Itchy homolog E3 ubiqui 96.7 0.0082 2.8E-07 56.3 10.5 105 334-446 37-144 (173)
30 1ugk_A Synaptotagmin IV, KIAA1 96.7 0.018 6E-07 50.9 12.1 105 335-447 24-136 (138)
31 2z0u_A WW domain-containing pr 96.6 0.01 3.6E-07 54.5 10.1 102 335-444 45-155 (155)
32 1rh8_A Piccolo protein; beta-s 96.6 0.008 2.8E-07 53.2 9.0 106 334-447 19-141 (142)
33 2chd_A Rabphilin-3A, exophilin 96.3 0.034 1.2E-06 49.2 11.1 101 335-444 31-140 (142)
34 2r83_A Synaptotagmin-1; C2A-C2 96.2 0.018 6.1E-07 56.8 9.7 105 334-445 151-273 (284)
35 1wfm_A Synaptotagmin XIII; C2 95.8 0.061 2.1E-06 47.7 10.5 101 335-447 28-135 (138)
36 1dqv_A Synaptotagmin III; beta 95.1 0.011 3.8E-07 59.2 3.6 107 334-447 153-278 (296)
37 2cjt_A UNC-13 homolog A, MUNC1 94.3 0.5 1.7E-05 41.9 11.8 95 334-443 6-103 (131)
38 1dqv_A Synaptotagmin III; beta 94.2 0.38 1.3E-05 48.0 12.3 121 334-465 21-150 (296)
39 2cjs_A UNC-13 homolog A, MUNC1 91.6 0.69 2.4E-05 43.0 9.0 82 334-430 15-100 (167)
40 3jzy_A Intersectin 2; C2 domai 91.3 0.64 2.2E-05 49.5 9.6 107 331-445 385-495 (510)
41 3l9b_A Otoferlin; C2-domain, b 91.0 1.1 3.6E-05 41.6 9.4 118 332-466 20-142 (144)
42 1cjy_A CPLA2, protein (cytosol 88.3 1.3 4.4E-05 50.8 9.4 101 333-445 18-127 (749)
43 1djx_A PLC-D1, phosphoinositid 86.5 4.4 0.00015 45.3 12.2 121 328-462 492-622 (624)
44 3bxj_A RAS GTPase-activating p 85.3 0.15 5.3E-06 55.1 -0.3 99 335-445 13-117 (483)
45 3nsj_A Perforin-1; pore formin 84.0 20 0.00068 39.5 15.8 123 332-476 393-518 (540)
46 3pfq_A PKC-B, PKC-beta, protei 78.4 5 0.00017 44.8 8.7 103 335-447 174-283 (674)
47 3ohm_B 1-phosphatidylinositol- 24.1 4.2E+02 0.014 30.9 11.8 113 334-465 726-848 (885)
48 3qr0_A Phospholipase C-beta (P 23.2 3.6E+02 0.012 31.1 10.9 111 333-461 650-770 (816)
49 2zkm_X 1-phosphatidylinositol- 22.6 4.6E+02 0.016 30.0 11.6 96 334-447 679-783 (799)
No 1
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=97.78 E-value=0.00033 Score=63.19 Aligned_cols=124 Identities=18% Similarity=0.182 Sum_probs=82.7
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccC-CCccccccceeee---eeccccceeEEEEee-ccccEEEEEEecCCCC
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQ-PDIFFNAKQKLTI---LSKSGMKQVASFQCE-ATGELLFELVSHSTSK 407 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q-~d~~~~~~~~~~i---~s~s~~~~~~~lqCE-~t~~lvlElr~~~~~~ 407 (580)
.+.|.|++++||+... ....+-||.++... .+.... ..+..+ +.++.|++.+.|... ....|.|+|.-+..
T Consensus 21 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~-- 97 (153)
T 3b7y_A 21 IVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLT-SVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENR-- 97 (153)
T ss_dssp EEEEEEEEEESCC-------CCEEEEEEEEETTTEEEE-EEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccce-eeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCC--
Confidence 4778889999998542 12367899998652 221011 111111 456799999999887 45689999887654
Q ss_pred cccCCCcccceeEEeecccccCCCCcc--e-EEEEEeeccCCCCCCCCCeeEEEEEeecC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPISKL--A-VEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~L--s-~E~w~~L~~~~~~~~~~p~~lrva~S~Tp 464 (580)
+++...||.++|+++++....... . .++|+.|.+.++ .+...=.|+|.+++.|
T Consensus 98 ---~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~-~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 98 ---LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSH-KSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ---SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSST-TCCCCSEEEEEEEECC
T ss_pred ---CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccC-CCCcceEEEEEEEEeC
Confidence 567889999999999998754321 2 259999988753 2233458888888776
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.67 E-value=0.00067 Score=60.13 Aligned_cols=122 Identities=16% Similarity=0.231 Sum_probs=83.6
Q ss_pred EEEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEee-----ccccEEEEEEecCCCCc
Q 008023 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHSTSKI 408 (580)
Q Consensus 334 ev~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~lqCE-----~t~~lvlElr~~~~~~l 408 (580)
.+.|.|++++||+.......+-||.++... .+ .+.+ ...=+.++.|++.+.|.+. ....|.|++..+..
T Consensus 8 ~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~-~~-~kT~-v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~--- 81 (140)
T 2dmh_A 8 MLRVIVESASNIPKTKFGKPDPIVSVIFKD-EK-KKTK-KVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET--- 81 (140)
T ss_dssp EEEEEEEEEESCCCCSSSCCCEEEEEECSS-CE-EECC-CCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC---
T ss_pred EEEEEEEEeeCCCCCCCCCCCeEEEEEECC-Ee-EEee-eecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC---
Confidence 377888999999865323368899998552 11 1110 1111346799999999986 25788999887655
Q ss_pred ccCCCcccceeEEeecccccCCCCcceEEEEEe---eccCCCCCCCCCeeEEEEEeecCCccc
Q 008023 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFD---LVPRSGNVSSKPISLRIAVSFTIPTLA 468 (580)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~---L~~~~~~~~~~p~~lrva~S~TpPvqA 468 (580)
+++..+||.+.|++++|... -..+.|+. |...++. ...=.|+|.+++.||...
T Consensus 82 --~~~~~~lG~~~i~l~~l~~~---~~~~~w~~l~~l~~~~~~--~~~G~l~l~~~~~p~~~~ 137 (140)
T 2dmh_A 82 --IGQNKLIGTATVALKDLTGD---QSRSLPYKLISLLNEKGQ--DTGATIDLVIGYDPPSGP 137 (140)
T ss_dssp --SSSCCCCEEEEEEGGGTCSS---SCEEEEEEEEEEECTTCC--EEEEEEEEEEEECCCBSS
T ss_pred --CCCCceEEEEEEEHHHhccC---CCceeEEeeeeccCCCCC--CCCCEEEEEEEEECCCCC
Confidence 56678999999999999753 46788988 5443321 222488899999887653
No 3
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=97.45 E-value=0.0013 Score=58.11 Aligned_cols=105 Identities=15% Similarity=0.209 Sum_probs=72.6
Q ss_pred EEEEEEEeecCCCCCcc-CCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee-----ccccEEEEEEecC
Q 008023 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-----ATGELLFELVSHS 404 (580)
Q Consensus 334 ev~l~iv~~knl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE-----~t~~lvlElr~~~ 404 (580)
.+.|.|++++||+.... ...+-||+++... |..-....+..+ +.++.|++.+.|.+- ....|.|++..+.
T Consensus 22 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 100 (141)
T 1v27_A 22 QLIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 100 (141)
T ss_dssp EEEEEEEEEESCCCCSSSCCCCEEEECCCSS-CCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBC
T ss_pred EEEEEEEEccCCCCcCCCCCCCCEEEEEEec-CCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECC
Confidence 37778899999986522 2358899998642 210000112222 456799999999852 3468999988776
Q ss_pred CCCcccCCC--cccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 008023 405 TSKIPMTGA--SKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (580)
Q Consensus 405 ~~~l~~~~~--sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (580)
. +++ ..+||.+.|++.++... . .+.|++|.+.+..
T Consensus 101 ~-----~~~~~~~~lG~~~i~l~~l~~~--~--~~~W~~L~~~~~g 137 (141)
T 1v27_A 101 R-----VREEESEFLGEILIELETALLD--D--EPHWYKLQTHDSG 137 (141)
T ss_dssp S-----SSSCCBCCCEEEEEEGGGCCCS--S--EEEEEECBCCSSC
T ss_pred C-----CcCCCCceEEEEEEEccccCCC--C--CCceEECcccccC
Confidence 5 333 78999999999999864 3 7899999887554
No 4
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.36 E-value=0.0013 Score=58.56 Aligned_cols=105 Identities=16% Similarity=0.183 Sum_probs=73.3
Q ss_pred EEEEEEeecCCCCCc-cCCCceEEEEeccCCCc-cccccceeeeeeccccceeEEEEee-----ccccEEEEEEecCCCC
Q 008023 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHSTSK 407 (580)
Q Consensus 335 v~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~-~~~~~~~~~i~s~s~~~~~~~lqCE-----~t~~lvlElr~~~~~~ 407 (580)
+.|.|++++||+... ....+-||.++....+. ....+ ...=+.++.|++.+.|..- ....|.|+|..+..
T Consensus 28 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~-v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~-- 104 (141)
T 2d8k_A 28 LTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETK-VKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR-- 104 (141)
T ss_dssp EEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECC-CCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS--
T ss_pred EEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCc-eEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC--
Confidence 678889999998652 22357899998652111 11100 1111456799999888742 24678999887654
Q ss_pred cccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (580)
+++..+||.+.|++.++... -..+.|++|.+.+..
T Consensus 105 ---~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~~~~~~ 139 (141)
T 2d8k_A 105 ---FSRNDPIGEVSIPLNKVDLT---QMQTFWKDLKPSGPS 139 (141)
T ss_dssp ---SSSCEEEEEEEEETTTSCTT---SCEEEEECCEECCCC
T ss_pred ---CCCCcEEEEEEEEhhhhcCC---CCccEEEECcCCCCC
Confidence 56778999999999999864 268999999987654
No 5
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=97.36 E-value=0.002 Score=59.85 Aligned_cols=126 Identities=19% Similarity=0.220 Sum_probs=78.2
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccCC-Cccccccceeee--eeccccceeEEEEeec-cccEEEEEEecCCCCc
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQP-DIFFNAKQKLTI--LSKSGMKQVASFQCEA-TGELLFELVSHSTSKI 408 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~-d~~~~~~~~~~i--~s~s~~~~~~~lqCE~-t~~lvlElr~~~~~~l 408 (580)
.+.|.|++++||+... ....+-||.++.... +......++-.+ +.++.|++.+.|...+ ...|.|+|.-+..
T Consensus 9 ~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~--- 85 (176)
T 3m7f_B 9 VVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENR--- 85 (176)
T ss_dssp EEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC----
T ss_pred EEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCC---
Confidence 3677889999998542 123688999986532 111000111111 4567899999999884 4588999886544
Q ss_pred ccCCCcccceeEEeecccccCCCCcce---EEEEEeeccCCCCCCCCCeeEEEEEeecCC
Q 008023 409 PMTGASKTMGTASLSLQNFISPISKLA---VEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (580)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls---~E~w~~L~~~~~~~~~~p~~lrva~S~TpP 465 (580)
+.+..+||.+.|++.++......+. ...|+.|.+.++. +...=.|+|.++++|.
T Consensus 86 --~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 86 --LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHK-SRVKGYLRLKMTYLPK 142 (176)
T ss_dssp -----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTT-CCCCSEEEEEEEECC-
T ss_pred --CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCC-CccCEEEEEEEEEEeC
Confidence 4567899999999999987532211 1289999886442 2233588888888764
No 6
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=97.32 E-value=0.002 Score=57.33 Aligned_cols=103 Identities=17% Similarity=0.333 Sum_probs=71.0
Q ss_pred EEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceeee---eeccccceeEEEE-eec----cccEEEEEEecCCC
Q 008023 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQ-CEA----TGELLFELVSHSTS 406 (580)
Q Consensus 335 v~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lq-CE~----t~~lvlElr~~~~~ 406 (580)
+.|.|++++||+.......+-||+++.. +|..-..+.+..+ +.++.|++.+.|. +.. ...|.|+|.-+..
T Consensus 22 L~V~V~~a~~L~~~~~g~~DPyv~v~l~-~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~- 99 (134)
T 2b3r_A 22 LFIMVMHIKDLVTEDGADPNPYVKTYLL-PDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAES- 99 (134)
T ss_dssp EEEEEEEEECCCCTTSCCCCEEEEEEEE-SCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCS-
T ss_pred EEEEEEEeeCCCCCCCCCCCeEEEEEEE-cCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCC-
Confidence 7788899999986422336889999865 2310000112222 4567899999998 652 4688899887654
Q ss_pred CcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCC
Q 008023 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRS 446 (580)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~ 446 (580)
+++..+||.++|++.++... =..+.|++|.+.+
T Consensus 100 ----~~~~~~lG~~~i~l~~l~~~---~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 100 ----LRENFFLGGITLPLKDFNLS---KETVKWYQLTAAT 132 (134)
T ss_dssp ----SSCCEEEEEEEEEGGGSCTT---SCEEEEEECBC--
T ss_pred ----CCCCcEEEEEEEEhhhccCC---CCcceeEECCCcc
Confidence 56678999999999999753 3578999998753
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=97.30 E-value=0.0057 Score=54.70 Aligned_cols=122 Identities=11% Similarity=0.239 Sum_probs=79.8
Q ss_pred EEEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEee-ccccEEEEEEecCCCCc--
Q 008023 333 VEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTSKI-- 408 (580)
Q Consensus 333 ~ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~lqCE-~t~~lvlElr~~~~~~l-- 408 (580)
-.+.|.|++++||+... ....+-||.++.. +.....+ ...=+.++.|++.+.|.+. +...|.|++.-+...-.
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~--~~~~kT~-~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVG--KTKKRTK-TIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEET--TEEEECC-CCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHH
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC--CEEEECC-ccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCcccc
Confidence 45888899999998642 2336889998862 2111110 1111356799999999997 56789999887665300
Q ss_pred --c--cCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEeec
Q 008023 409 --P--MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFT 463 (580)
Q Consensus 409 --~--~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~T 463 (580)
. ...+...||.+.|+++++. -..+.|++|.+.++.. ...=.|+|.++++
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~-----~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLS-----GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCC-----SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCc-----CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 0 0267889999999999983 2468999998754321 1223566666543
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=97.27 E-value=0.0041 Score=53.90 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=77.0
Q ss_pred EEEEEEeecCCCCC----ccCCCceEEEEeccCC-Cccccccceeee---eeccccceeEEEEee--ccccEEEEEEecC
Q 008023 335 VFVEIVAVKNLPED----HKDKGDLFVFFSKSQP-DIFFNAKQKLTI---LSKSGMKQVASFQCE--ATGELLFELVSHS 404 (580)
Q Consensus 335 v~l~iv~~knl~~~----~~~~~~lfVr~~~~q~-d~~~~~~~~~~i---~s~s~~~~~~~lqCE--~t~~lvlElr~~~ 404 (580)
+.|.|++++||+.. .....+-||.++.... .... +..+ +.++.|++.+.|... ....|.|++.-+.
T Consensus 5 L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~----kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 5 FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRK----RTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp EEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCE----ECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred EEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceE----EccccCCCCCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 67889999999962 1123688999996532 1111 1222 346799999999985 3467888887765
Q ss_pred CCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEeecC
Q 008023 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (580)
Q Consensus 405 ~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~Tp 464 (580)
. ++ ..+||.+.|++.+|.. .-..+.|++|.+.+ -..+++.+..+|
T Consensus 81 ~-----~~-~~~iG~~~i~l~~l~~---~~~~~~~~~L~~~~------~g~i~~~le~~~ 125 (126)
T 1rlw_A 81 Y-----VM-DETLGTATFTVSSMKV---GEKKEVPFIFNQVT------EMVLEMSLEVAS 125 (126)
T ss_dssp S-----SC-CEEEEEEEEEGGGSCT---TCEEEEEEEETTTE------EEEEEEEEECCC
T ss_pred C-----CC-CceeEEEEEEHHHccC---CCcEEEEEEcCCCc------eEEEEEEEEeCC
Confidence 3 33 7799999999999974 46889999998732 255666555443
No 9
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=97.26 E-value=0.0013 Score=57.72 Aligned_cols=105 Identities=17% Similarity=0.273 Sum_probs=70.5
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee--eeccccceeEEEEeecc----ccEEEEEEecCCC
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI--LSKSGMKQVASFQCEAT----GELLFELVSHSTS 406 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i--~s~s~~~~~~~lqCE~t----~~lvlElr~~~~~ 406 (580)
.+.|.|++++||+... ....+-||.++....+......++-.+ +.++.|++.+.|.+... ..|.|++..+..
T Consensus 17 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~- 95 (138)
T 3n5a_A 17 SIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK- 95 (138)
T ss_dssp EEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS-
T ss_pred eEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC-
Confidence 3778889999998642 223688999986532221111111111 35678999999998642 478888877654
Q ss_pred CcccCCCcccceeEEeecc----------cccCCCCcceEEEEEeecc
Q 008023 407 KIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVP 444 (580)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~----------dll~~~~~Ls~E~w~~L~~ 444 (580)
+++...||.+.|+++ +|+.. |.-.+++|..|.|
T Consensus 96 ----~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~-~~~~~~~Wh~L~p 138 (138)
T 3n5a_A 96 ----LSRNDVIGKIYLSWKSGPGEVKHWKDMIAR-PRQPVAQWHQLKA 138 (138)
T ss_dssp ----SSCCEEEEEEEESSSSCHHHHHHHHHHHHS-TTCCEEEEEECBC
T ss_pred ----CCCCcEEEEEEEccccCChHHHHHHHHHhC-CCCeEEEEeecCC
Confidence 567789999999987 55553 5677888887765
No 10
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=97.22 E-value=0.002 Score=57.37 Aligned_cols=101 Identities=14% Similarity=0.180 Sum_probs=70.5
Q ss_pred EEEEEEeecCCCCCc-cCCCceEEEEeccCCCc-cccccceeeeeeccccceeEEEEeec----cccEEEEEEecCCCCc
Q 008023 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSKI 408 (580)
Q Consensus 335 v~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~-~~~~~~~~~i~s~s~~~~~~~lqCE~----t~~lvlElr~~~~~~l 408 (580)
+.|.|++++||+... ....+-||+++....+. .... ....=+.++.|++.+.|.... ...|.|++..+..
T Consensus 36 L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT-~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~--- 111 (143)
T 3f04_A 36 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFET-KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR--- 111 (143)
T ss_dssp EEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEEC-CCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS---
T ss_pred EEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEEC-ccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC---
Confidence 677889999998652 22368899998642221 1110 111114567899999998763 2678888876554
Q ss_pred ccCCCcccceeEEeecccccCCCCcceEEEEEeecc
Q 008023 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (580)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~ 444 (580)
+++..+||.+.|++.++.. .-..+.|++|.|
T Consensus 112 --~~~~~~iG~~~i~l~~l~~---~~~~~~W~~L~~ 142 (143)
T 3f04_A 112 --FSKHDIIGEFKVPMNTVDF---GHVTEEWRDLQS 142 (143)
T ss_dssp --SSCCEEEEEEEEEGGGCCT---TSCEEEEEECBC
T ss_pred --CCCCceEEEEEEEHHHccC---CCCcceEEECcC
Confidence 5677899999999999864 346789999876
No 11
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=97.21 E-value=0.0015 Score=59.27 Aligned_cols=106 Identities=17% Similarity=0.286 Sum_probs=71.9
Q ss_pred EEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee---ccccEEEEEEecCCCCc
Q 008023 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE---ATGELLFELVSHSTSKI 408 (580)
Q Consensus 335 v~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE---~t~~lvlElr~~~~~~l 408 (580)
+.|.|++++||+.......+-||+++......... ..+..+ +.++.|++.+.|... ....|.|+|.-....
T Consensus 29 L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~-- 105 (153)
T 3fbk_A 29 LLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLR-HQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQ-- 105 (153)
T ss_dssp EEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTT-CEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSS--
T ss_pred EEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCcc-EEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCC--
Confidence 67788999999865323368899998653211111 112222 456789999999873 335688888765441
Q ss_pred ccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 008023 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
.++...||.+.|++.+|..+ .-.++.|+.|.+...
T Consensus 106 --~~~d~~lG~~~i~l~~l~~~--~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 106 --SRQSGLIGCMSFGVKSLLTP--DKEISGWYYLLGEHL 140 (153)
T ss_dssp --GGGCEEEEEEEEEHHHHTC----CCEEEEEECBCTTG
T ss_pred --CCCCcEEEEEEEEHHHhcCC--CCccccEEECCChhh
Confidence 23478999999999999864 467899999988754
No 12
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=97.21 E-value=0.0021 Score=57.80 Aligned_cols=101 Identities=21% Similarity=0.264 Sum_probs=71.9
Q ss_pred EEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec---cccEEEEEEecCCCC
Q 008023 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA---TGELLFELVSHSTSK 407 (580)
Q Consensus 335 v~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~---t~~lvlElr~~~~~~ 407 (580)
+.|.|++++||+... ....+-||+++......... ..+..+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 33 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~-- 109 (149)
T 1a25_A 33 LIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSES-KQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-- 109 (149)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSS-CEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcc-eEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC--
Confidence 788899999998552 22368999998653111111 111111 4567999999999873 3578888887654
Q ss_pred cccCCCcccceeEEeecccccCCCCcceEEEEEeeccC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~ 445 (580)
+++..+||.+.|++.+|... ..+.|++|.+.
T Consensus 110 ---~~~~~~iG~~~i~l~~l~~~----~~~~W~~L~~~ 140 (149)
T 1a25_A 110 ---TSRNDFMGSLSFGISELQKA----GVDGWFKLLSQ 140 (149)
T ss_dssp ---SSCCEEEEEEEEEHHHHTTC----CEEEEEECBCH
T ss_pred ---CCCCCEEEEEEEEHHHhCcC----ccCCeEEccCC
Confidence 56778999999999999864 38999999775
No 13
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=97.18 E-value=0.00098 Score=59.97 Aligned_cols=108 Identities=16% Similarity=0.222 Sum_probs=70.9
Q ss_pred EEEEEEeecCCCCCc--cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 008023 335 VFVEIVAVKNLPEDH--KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (580)
Q Consensus 335 v~l~iv~~knl~~~~--~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~ 405 (580)
+.|.|++++||+... ....+-||+++.. ++.....+.+..+ +.++.|++.+.|.... ...|.|++.-+..
T Consensus 25 L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~-~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~ 103 (148)
T 3fdw_A 25 LVVHVKECHQLAYADEAKKRSNPYVKTYLL-PDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR 103 (148)
T ss_dssp EEEEEEEEESCCCSBTTTTBCCEEEEEEEE-TCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG
T ss_pred EEEEEEEecCCCCcccCCCCCCeEEEEEEE-cCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC
Confidence 677889999998432 2236889999865 3321111112222 3567899999998763 3358888876544
Q ss_pred CCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCC
Q 008023 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSS 451 (580)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~ 451 (580)
+++..+||.+.|++.++... =..+.|++|.+++..+++
T Consensus 104 -----~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~~~~~~~~~ 141 (148)
T 3fdw_A 104 -----FGRNTFLGEAEIQMDSWKLD---KKLDHCLPLHGKISAESE 141 (148)
T ss_dssp -----GGCEEEEEEEEEEHHHHHHH---CCSEEEEECBCC------
T ss_pred -----CcCCcEEEEEEEEccccccc---CCccceEECcCccccccc
Confidence 56788999999999999753 256799999998765443
No 14
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=97.17 E-value=0.0018 Score=59.42 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=71.2
Q ss_pred EEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCCC
Q 008023 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (580)
Q Consensus 335 v~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~~ 406 (580)
+.|.|++++||+... ....+-||.++....+.... ..+..+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 39 L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~- 116 (166)
T 2cm5_A 39 LIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKA-KHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI- 116 (166)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CC-EEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS-
T ss_pred EEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccc-eEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC-
Confidence 677789999998652 22368899998653211111 111222 4567999999999864 4588899887654
Q ss_pred CcccCCCcccceeEEeeccc----------ccCCCCcceEEEEEeeccCCC
Q 008023 407 KIPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~d----------ll~~~~~Ls~E~w~~L~~~~~ 447 (580)
+++..+||.++|++.+ |+.. +.-.++.|..|.+.+.
T Consensus 117 ----~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~-~~~~~~~Wh~L~~~~~ 162 (166)
T 2cm5_A 117 ----GKSNDYIGGCQLGISAKGERLKHWYECLKN-KDKKIERWHQLQNENH 162 (166)
T ss_dssp ----SSCCEEEEEEEEETTCCHHHHHHHHHHHHC-TTCCEEEEEECBC---
T ss_pred ----CCCCcEEEeEEEecccCCchhHHHHHHHhC-CCCcceEeeECCCccc
Confidence 5677899999999665 4554 5678899999887544
No 15
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=97.17 E-value=0.0015 Score=59.06 Aligned_cols=105 Identities=12% Similarity=0.223 Sum_probs=70.1
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeecc----ccEEEEEEecCC
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEAT----GELLFELVSHST 405 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~t----~~lvlElr~~~~ 405 (580)
.+.|.|++++||+... ....+-||.++......... +.+..+ +.++.|++.+.|.+... ..|.|+|..+..
T Consensus 31 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~ 109 (153)
T 1w15_A 31 TLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRIS-KKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER 109 (153)
T ss_dssp EEEEEEEEEESCC------CCCEEEEEEEEETTEEEE-EEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT
T ss_pred EEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEec-eEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC
Confidence 3777889999998642 22368899998653211110 111111 44679999999988743 568888876653
Q ss_pred CCcccCCCcccceeEEeeccc----------ccCCCCcceEEEEEeeccC
Q 008023 406 SKIPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVPR 445 (580)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~d----------ll~~~~~Ls~E~w~~L~~~ 445 (580)
+++..+||.+.|++.+ |+.. |...+++|..|.++
T Consensus 110 -----~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~-p~~~~~~Wh~L~~~ 153 (153)
T 1w15_A 110 -----GSRNEVIGRLVLGATAEGSGGGHWKEICDF-PRRQIAKWHMLCDG 153 (153)
T ss_dssp -----TSCCEEEEEEEESTTCCSHHHHHHHHHHHS-TTCCEEEEEECBCC
T ss_pred -----CCCCcEEEEEEECCCCCchHHHHHHHHHhC-CCCeeeeccccccC
Confidence 5677899999998766 7764 67889999988763
No 16
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=97.12 E-value=0.0017 Score=57.15 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=81.0
Q ss_pred EEEEEEEeecCCCCCcc-CCCceEEEEeccCCCccccccceee--eeeccccceeEEEEee-ccccEEEEEEecCCCCcc
Q 008023 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLT--ILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIP 409 (580)
Q Consensus 334 ev~l~iv~~knl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~--i~s~s~~~~~~~lqCE-~t~~lvlElr~~~~~~l~ 409 (580)
.+.|.|++++||+.... ...+-||.++... ++ ++ .+.. =+.++.|++.+.|... ....|.|++..+..
T Consensus 11 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~-~k--T~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~---- 82 (136)
T 1wfj_A 11 TLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-QD-QK--SNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDV---- 82 (136)
T ss_dssp EEEEEEEEEEECSSCCSSCSSCCCEEEESSS-CE-EE--CCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSS----
T ss_pred EEEEEEEeccCCCCcccCCCcCceEEEEECC-cc-ce--eEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCC----
Confidence 36778899999986522 2367899988542 22 11 1111 1346799999999988 46788888876643
Q ss_pred cCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEeecCC
Q 008023 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (580)
Q Consensus 410 ~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpP 465 (580)
+.+..+||.+.|++++++.. .-..+.|++|.+. + ...=.|++.+++.|-
T Consensus 83 -~~~d~~lG~~~i~l~~l~~~--~~~~~~w~~L~~~-~---~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 -GTEDDAVGEATIPLEPVFVE--GSIPPTAYNVVKD-E---EYKGEIWVALSFKPS 131 (136)
T ss_dssp -CTTTCCSEEEEEESHHHHHH--SEEEEEEEEEEET-T---EEEEEEEEEEEEEEC
T ss_pred -CCCCceEEEEEEEHHHhccC--CCCCcEEEEeecC-C---ccCEEEEEEEEEEeC
Confidence 56788999999999999754 3457899999832 1 222477777777664
No 17
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=97.11 E-value=0.0054 Score=53.97 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=77.8
Q ss_pred EEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEee-ccccEEEEEEecCCCCcccCC
Q 008023 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPMTG 412 (580)
Q Consensus 335 v~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~lqCE-~t~~lvlElr~~~~~~l~~~~ 412 (580)
+.|.|++++||+... ....+-||.++.. +++ ...+ ...=+.++.|++.+.|... +...|.|++..+.. ++
T Consensus 15 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~-~~~-~kT~-~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~-----~~ 86 (133)
T 2ep6_A 15 LQVKVLKAADLLAADFSGKSDPFCLLELG-NDR-LQTH-TVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDG-----DK 86 (133)
T ss_dssp EEEEEEEEESCCCSSSSSCCCEEEEEEET-TEE-EECC-CCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEET-----TE
T ss_pred EEEEEEeeECCCCCCCCCCcCeEEEEEEC-CEE-EEee-eecCCCCCccccEEEEEecCCCCEEEEEEEECCC-----CC
Confidence 667789999998552 2236789999854 222 1111 1111356799999999987 56789999987765 45
Q ss_pred CcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEee
Q 008023 413 ASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSF 462 (580)
Q Consensus 413 ~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~ 462 (580)
+...||.+.|++.++... .+.|++|...++. +...=.|+|.+++
T Consensus 87 ~~~~lG~~~i~l~~l~~~-----~~~w~~L~~~~~~-~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDG-----QPNCYVLKNKDLE-QAFKGVIYLEMDL 130 (133)
T ss_dssp EEEECCBCEEEGGGCCSS-----CCEECCCBCSCTT-SCCSSEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCC-----CceEEEeecCCCC-CccceEEEEEEEE
Confidence 678999999999999753 2589999876542 2233366666664
No 18
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=97.06 E-value=0.0028 Score=57.65 Aligned_cols=105 Identities=18% Similarity=0.266 Sum_probs=72.5
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~ 405 (580)
.+.|.|++++||+... ....+-||.++....+.... ..+..+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 26 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 104 (159)
T 1tjx_A 26 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLK-KKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 104 (159)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred EEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceec-eeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC
Confidence 3677789999998552 22367899998653221111 111212 4567999999999863 3568888887654
Q ss_pred CCcccCCCcccceeEEeecc----------cccCCCCcceEEEEEeeccC
Q 008023 406 SKIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVPR 445 (580)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~----------dll~~~~~Ls~E~w~~L~~~ 445 (580)
+++..+||.+.|+.. +|+.. +.-.+++|+.|.+.
T Consensus 105 -----~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~-~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 105 -----IGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQVE 148 (159)
T ss_dssp -----SSCCEEEEEEEEETTCCHHHHHHHHHHHHS-TTCCEEEEEECBCH
T ss_pred -----CCCCceEEEEEECCCCCCcHHHHHHHHHHC-CCCeeeeEEECcCc
Confidence 567789999999987 56654 56788999999774
No 19
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=97.02 E-value=0.0073 Score=53.04 Aligned_cols=124 Identities=10% Similarity=0.068 Sum_probs=78.3
Q ss_pred EEEEEEEEeecCCCCC-ccCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEeeccccEEEEEEecCCCCcccC
Q 008023 333 VEVFVEIVAVKNLPED-HKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMT 411 (580)
Q Consensus 333 ~ev~l~iv~~knl~~~-~~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~lqCE~t~~lvlElr~~~~~~l~~~ 411 (580)
..+.|.|++++||+.. .....+-||.++.......... ....=+.++.|++.+.|.+.....|.|++.-+.... ..
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT-~v~~~t~nP~wne~f~f~v~~~~~l~~~v~d~d~~~--~~ 81 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHST-DTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIH--KK 81 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEEC-CCCSSCSSCEEEEEEEEEEETTCCEEEEEEEGGGTT--SS
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEEC-CccCCCCCCCccCEEEEEeCCCCEEEEEEEECCCCC--CC
Confidence 4577889999999754 2223688999986432222111 011113467899999999986667999998765521 11
Q ss_pred CCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCC-CCCeeEEEEEe
Q 008023 412 GASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVS-SKPISLRIAVS 461 (580)
Q Consensus 412 ~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~-~~p~~lrva~S 461 (580)
.....||.+.|++.++.+.. -....|++|...++... ...=.|.|.+|
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~--~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLK--DTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHT--TSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhccc--ccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 23689999999999885432 23347899987643322 22335555554
No 20
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=97.00 E-value=0.004 Score=54.64 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=71.0
Q ss_pred EEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec-c--ccEEEEEEecCCCC
Q 008023 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA-T--GELLFELVSHSTSK 407 (580)
Q Consensus 335 v~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~-t--~~lvlElr~~~~~~ 407 (580)
+.|.|++++||+... ....+-||.++......... ..+..+ +.++.|++.+.|.... . ..|.|++..+..
T Consensus 18 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~-~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~-- 94 (137)
T 3rdl_A 18 LHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNES-KQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR-- 94 (137)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCC-CEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCe-eecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC--
Confidence 778889999998642 22368899998642110000 111222 4567899999998763 2 468888877644
Q ss_pred cccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
+++..+||.++|++.++... . .+.|+.|.+.+.
T Consensus 95 ---~~~~~~iG~~~i~l~~l~~~--~--~~~W~~L~~~~~ 127 (137)
T 3rdl_A 95 ---TTRNDFMGSLSFGVSELMKM--P--ASGWYKLLNQEE 127 (137)
T ss_dssp ---SSCCEEEEEEEEEHHHHHHS--C--EEEEEECBCHHH
T ss_pred ---CCCCceEEEEEEeHHHhccC--c--cCceEECcCccc
Confidence 56788999999999999874 2 799999987643
No 21
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.99 E-value=0.0041 Score=56.17 Aligned_cols=99 Identities=14% Similarity=0.181 Sum_probs=70.5
Q ss_pred EEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCCC
Q 008023 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (580)
Q Consensus 335 v~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~~ 406 (580)
+.|.|++++||+... ....+-||+++....+.. ..+..+ +.++.|++.+.|.... ...|.|+|..+..
T Consensus 44 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~- 119 (152)
T 1rsy_A 44 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKK---KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR- 119 (152)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCS---CEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS-
T ss_pred EEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCc---eEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC-
Confidence 677889999998652 223678999986522211 111222 3567999998888752 4689999887654
Q ss_pred CcccCCCcccceeEEeecccccCCCCcceEEEEEeecc
Q 008023 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (580)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~ 444 (580)
+++..+||.+.|++.++... -.++.|++|.+
T Consensus 120 ----~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~~ 150 (152)
T 1rsy_A 120 ----FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQS 150 (152)
T ss_dssp ----SSCCEEEEEEEEEGGGCCCS---SCEEEEEECBC
T ss_pred ----CCCCcEEEEEEEEchhccCC---CCcceEEECCC
Confidence 56778999999999998642 36899999876
No 22
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.99 E-value=0.0036 Score=56.04 Aligned_cols=103 Identities=16% Similarity=0.240 Sum_probs=71.5
Q ss_pred EEEEEEEeecCCCCC--cc------CCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEE
Q 008023 334 EVFVEIVAVKNLPED--HK------DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLF 398 (580)
Q Consensus 334 ev~l~iv~~knl~~~--~~------~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvl 398 (580)
.+.|.|++++||+.. .. ...+-||+++....+.. ..+..+ +.++.|++.+.|.... ...|.|
T Consensus 27 ~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 27 HLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKN---SKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp EEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSS---CEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred EEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCc---ceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 377788999999863 10 12678999986532211 111222 3467999999998763 358888
Q ss_pred EEEecCCCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 008023 399 ELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 399 Elr~~~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
+|.-+.. +++..+||.+.|++.++.... ..+.|+.|.|++.
T Consensus 104 ~V~d~d~-----~~~~~~iG~~~i~l~~l~~~~---~~~~w~~L~~~~~ 144 (147)
T 2enp_A 104 TVVDFDK-----FSRHCVIGKVSVPLCEVDLVK---GGHWWKALIPSGP 144 (147)
T ss_dssp EEECCST-----TCCSCCCEEEEEETTTSCTTT---CCCEEECCBCCCC
T ss_pred EEEECCC-----CcCCcEEEEEEEechhcCCCC---CccEEEEeecCCC
Confidence 8887654 566789999999999997542 3478999998754
No 23
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=96.99 E-value=0.0068 Score=53.70 Aligned_cols=115 Identities=8% Similarity=0.132 Sum_probs=76.5
Q ss_pred EEEEEEEeecCCCCCcc------------CCCceEEEEeccCCCccccccceeeeeeccccceeEEEEeeccccEEEEEE
Q 008023 334 EVFVEIVAVKNLPEDHK------------DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELV 401 (580)
Q Consensus 334 ev~l~iv~~knl~~~~~------------~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~lqCE~t~~lvlElr 401 (580)
.+.|.|++++||+.... ...+-||.++... ...... ....=+.++.|++.+.|.-.....|.|++.
T Consensus 7 ~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-~~~~~T-~~~~~t~nP~WnE~f~f~v~~~~~L~~~V~ 84 (136)
T 1gmi_A 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-SRIGQT-ATKQKTNSPAWHDEFVTDVCNGRKIELAVF 84 (136)
T ss_dssp EEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-EEEEEC-CCCSSCSSCEEEEEEEEEEEEECEEEEEEE
T ss_pred EEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-eEeeee-eEECCCcCCccCCEEEEEecCCCEEEEEEE
Confidence 36778899999985411 1157899987521 111100 001113467899988888764488889987
Q ss_pred ecCCCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEeecC
Q 008023 402 SHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (580)
Q Consensus 402 ~~~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~Tp 464 (580)
-+.. +.+..+||.++|+++++... +.-.++.|++|.|.+ .|+|.+++++
T Consensus 85 d~d~-----~~~dd~iG~~~i~l~~l~~~-~~~~~~~w~~L~~~G--------~i~l~l~~~~ 133 (136)
T 1gmi_A 85 HDAP-----IGYDDFVANCTIQFEELLQN-GSRHFEDWIDLEPEG--------KVYVIIDLSG 133 (136)
T ss_dssp ECCS-----SSSCEEEEEEEEEHHHHTST-TCSEEEEEEECBSSC--------EEEEEEEEEE
T ss_pred eCCC-----CCCCCEEEEEEEEHHHhccc-CCCCccEEEEcCCCe--------EEEEEEEEEe
Confidence 6543 56678999999999999975 345679999998742 4666666543
No 24
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.96 E-value=0.003 Score=56.12 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=72.2
Q ss_pred EEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCCCC
Q 008023 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (580)
Q Consensus 335 v~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~~~ 407 (580)
+.|.|++++||+.....+.+-||.++....+.... ..+..+ +.++.|++.+.|.... ...|.|+|..+....
T Consensus 26 L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~ 104 (142)
T 2dmg_A 26 LIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSG-RRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL 104 (142)
T ss_dssp EEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSS-CEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS
T ss_pred EEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCC-cccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc
Confidence 67778999999865332268899998753222111 112222 3467899988888753 358999998765411
Q ss_pred cccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (580)
.+...+||.+.|++.++... . ..+.|++|.+.++.
T Consensus 105 ---~~~~~~iG~~~i~l~~~~~~--~-~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 105 ---SKDKGLLGKVLVALASEELA--K-GWTQWYDLTEDSGP 139 (142)
T ss_dssp ---CCSCCCCEEEEEECCCSTTT--T-CBCCBCCCBCSCSC
T ss_pred ---ccCCcEEEEEEEeccccccc--c-cccceeeccCCCCC
Confidence 11235899999999998754 2 67899999987543
No 25
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=96.91 E-value=0.0052 Score=57.25 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=70.9
Q ss_pred EEEEEEEeecCCCCCc-----------cCCCceEEEEeccCCCccccccceeee--eeccccceeEEEEeeccccEEEEE
Q 008023 334 EVFVEIVAVKNLPEDH-----------KDKGDLFVFFSKSQPDIFFNAKQKLTI--LSKSGMKQVASFQCEATGELLFEL 400 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-----------~~~~~lfVr~~~~q~d~~~~~~~~~~i--~s~s~~~~~~~lqCE~t~~lvlEl 400 (580)
.+.|.|++++||+..- ....+-||.++... ....+ +..+ +.++.|++.+.|.-.....|.|++
T Consensus 30 ~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-~~~~k---T~v~~ktlnP~WNE~F~f~v~~~~~L~~~V 105 (157)
T 2fk9_A 30 YLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-VRVGQ---TSTKQKTNKPTYNEEFCANVTDGGHLELAV 105 (157)
T ss_dssp EEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-EEEEE---CCCCSSCSSCEEEEEEEEEEEEECEEEEEE
T ss_pred EEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-EeeEE---eeecCCCCCCccCcEEEEEcCCCCEEEEEE
Confidence 3778889999998542 01257899987531 11111 1112 456899999888876666788888
Q ss_pred EecCCCCcccCCCcccceeEEeecccccCCC-CcceEEEEEeeccC
Q 008023 401 VSHSTSKIPMTGASKTMGTASLSLQNFISPI-SKLAVEQWFDLVPR 445 (580)
Q Consensus 401 r~~~~~~l~~~~~sk~lG~~sisw~dll~~~-~~Ls~E~w~~L~~~ 445 (580)
.-... +.+...||+++|+++++.... +.-..+.|++|.+.
T Consensus 106 ~D~d~-----~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~~ 146 (157)
T 2fk9_A 106 FHETP-----LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEPE 146 (157)
T ss_dssp EECCS-----SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBSS
T ss_pred EECCC-----CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCCC
Confidence 75433 466789999999999998630 23578999999773
No 26
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=96.90 E-value=0.0027 Score=58.91 Aligned_cols=106 Identities=19% Similarity=0.193 Sum_probs=72.6
Q ss_pred EEEEEEEeecCCCCCc--cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee-ccccEEEEEE-ecCCC
Q 008023 334 EVFVEIVAVKNLPEDH--KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-ATGELLFELV-SHSTS 406 (580)
Q Consensus 334 ev~l~iv~~knl~~~~--~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE-~t~~lvlElr-~~~~~ 406 (580)
.+.|.|++++||+... ....+-||.++......... ..+..+ +.++.|++.+.|... ....|.|+|. -+..
T Consensus 31 ~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~- 108 (171)
T 2q3x_A 31 QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIA-KKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR- 108 (171)
T ss_dssp EEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST-
T ss_pred EEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCcccc-ceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC-
Confidence 3778889999998542 23368899998653111111 111112 346789998888876 4568888887 4332
Q ss_pred CcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 008023 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (580)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (580)
+++...||.+.|++.++... -..+.|++|.+.+..
T Consensus 109 ----~~~d~~iG~~~i~l~~l~~~---~~~~~W~~L~~~~~~ 143 (171)
T 2q3x_A 109 ----MDHKCFMGVAQILLEELDLS---SMVIGWYKLFPPSSL 143 (171)
T ss_dssp ----TCSSEEEEEEEECGGGSCTT---SCEEEEEECBCGGGG
T ss_pred ----CCCCCEEEEEEEEHHHcccC---CCcceeEECCCcccc
Confidence 56778999999999999753 258999999887553
No 27
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.90 E-value=0.0052 Score=53.45 Aligned_cols=98 Identities=16% Similarity=0.216 Sum_probs=65.2
Q ss_pred EEEEEEeecCCCCCcc-CCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee-----ccccEEEEEEecCC
Q 008023 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-----ATGELLFELVSHST 405 (580)
Q Consensus 335 v~l~iv~~knl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE-----~t~~lvlElr~~~~ 405 (580)
+.|.|++++||+.... ...+-||.++... |..-....+..+ +.++.|++.+.|.+. ....|.|++..+..
T Consensus 20 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~ 98 (129)
T 2bwq_A 20 LIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR 98 (129)
T ss_dssp EEEEEEEEESCCCCTTSCCBCEEEEEEEES-SCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC--
T ss_pred EEEEEEEeeCCCCCCCCCCCCCEEEEEEec-CCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc
Confidence 7788899999986522 2357899998642 210000111222 456789999999852 24688888887655
Q ss_pred CCcccCC--CcccceeEEeecccccCCCCcceEEEEEee
Q 008023 406 SKIPMTG--ASKTMGTASLSLQNFISPISKLAVEQWFDL 442 (580)
Q Consensus 406 ~~l~~~~--~sk~lG~~sisw~dll~~~~~Ls~E~w~~L 442 (580)
++ +...||.+.|++.++... . .+.|++|
T Consensus 99 -----~~~~~~~~lG~~~i~l~~l~~~--~--~~~W~~L 128 (129)
T 2bwq_A 99 -----VREEESEFLGEILIELETALLD--D--EPHWYKL 128 (129)
T ss_dssp ----------CEEEEEEEEEGGGCCCS--S--CEEEEEC
T ss_pred -----CcCcCCceeEEEEEEccccCCC--c--CCccEEC
Confidence 33 378999999999999864 3 7899987
No 28
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=96.88 E-value=0.015 Score=57.31 Aligned_cols=123 Identities=13% Similarity=0.156 Sum_probs=81.5
Q ss_pred EEEEEEEeecCCCCC-ccCCCceEEEEeccCCC-ccccccceeeeeeccccceeEEEEeec----cccEEEEEEecCCCC
Q 008023 334 EVFVEIVAVKNLPED-HKDKGDLFVFFSKSQPD-IFFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (580)
Q Consensus 334 ev~l~iv~~knl~~~-~~~~~~lfVr~~~~q~d-~~~~~~~~~~i~s~s~~~~~~~lqCE~----t~~lvlElr~~~~~~ 407 (580)
.+.|.|++++||+.. .....+-||.++....+ .....+ ...=+.++.|++.+.|.... ...|.|++..+..
T Consensus 20 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~-~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~-- 96 (284)
T 2r83_A 20 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETK-VHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR-- 96 (284)
T ss_dssp EEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECC-CCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCC-cccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC--
Confidence 377888999999854 22236889999864211 111110 11113467999999888753 3578888876554
Q ss_pred cccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEeecCC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpP 465 (580)
+++...||.+.|++.++... -..+.|++|.+..+......=.+.+.+...|+
T Consensus 97 ---~~~~~~lG~~~i~l~~l~~~---~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~ 148 (284)
T 2r83_A 97 ---FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQSAEKEEQEKLGDICFSLRYVPT 148 (284)
T ss_dssp ---SSCCCEEEEEEEEGGGCCCS---SCEEEEEECBCCSSCCCCCCCEEEEEEEEETT
T ss_pred ---CCCCceeEEEEEcchhcccC---CcceeEEEeeccccccccccccEEEEEEecCc
Confidence 56778999999999999753 36799999987654322233356666666654
No 29
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=96.71 E-value=0.0082 Score=56.27 Aligned_cols=105 Identities=17% Similarity=0.136 Sum_probs=72.8
Q ss_pred EEEEEEEeecCCC-CCccCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEeeccccEEEEEEecCCCCcccCC
Q 008023 334 EVFVEIVAVKNLP-EDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMTG 412 (580)
Q Consensus 334 ev~l~iv~~knl~-~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~lqCE~t~~lvlElr~~~~~~l~~~~ 412 (580)
.+.|.|++++||+ .....+.+-||.++... ...+.+ ...=+.++.|++.+.|.+.+...|.|+|.-+.. ++
T Consensus 37 ~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~--~~~kT~-v~~~tlnP~Wne~f~f~v~~~~~L~~~V~D~d~-----~~ 108 (173)
T 2nq3_A 37 QLQITVISAKLKENKKNWFGPSPYVEVTVDG--QSKKTE-KCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQT-----LK 108 (173)
T ss_dssp EEEEEEEEEEECCCC--CCCCCEEEEEEETT--EEEECC-CCSSCSSCEEEEEEEEEECTTCEEEEEEEECCS-----SS
T ss_pred EEEEEEEEeECCCCcccCCCCCeEEEEEECC--EEeEcc-ccCCCCCCeECCEEEEEeCCCCEEEEEEEECCC-----CC
Confidence 3777889999998 33222368899988542 111110 111134679999999999888899999987654 56
Q ss_pred CcccceeEEeecccccCCCC-cc-eEEEEEeeccCC
Q 008023 413 ASKTMGTASLSLQNFISPIS-KL-AVEQWFDLVPRS 446 (580)
Q Consensus 413 ~sk~lG~~sisw~dll~~~~-~L-s~E~w~~L~~~~ 446 (580)
+..+||.+.|++++++...+ .. .++.|+.|...+
T Consensus 109 ~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~ 144 (173)
T 2nq3_A 109 SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK 144 (173)
T ss_dssp CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS
T ss_pred CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC
Confidence 77899999999999986422 12 357899998864
No 30
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=96.71 E-value=0.018 Score=50.94 Aligned_cols=105 Identities=11% Similarity=0.126 Sum_probs=70.5
Q ss_pred EEEEEEeecCCCCCcc--CCCceEEEEeccCCCc-cccccceeeeeeccccceeEEEE-ee----ccccEEEEEEecCCC
Q 008023 335 VFVEIVAVKNLPEDHK--DKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQ-CE----ATGELLFELVSHSTS 406 (580)
Q Consensus 335 v~l~iv~~knl~~~~~--~~~~lfVr~~~~q~d~-~~~~~~~~~i~s~s~~~~~~~lq-CE----~t~~lvlElr~~~~~ 406 (580)
+.|.|++++||+.... ...+-||.++....+. .... ....=+.++.|++.+.|+ .. ....|.|+|..+..
T Consensus 24 L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT-~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~- 101 (138)
T 1ugk_A 24 FVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKT-RVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR- 101 (138)
T ss_dssp EEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEEC-CCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS-
T ss_pred EEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEec-CcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC-
Confidence 6778899999986432 2367899998652111 1110 011114467899999986 33 24588888887654
Q ss_pred CcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 008023 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
+++...||.+.|+++++.... =..+-|++|.+.++
T Consensus 102 ----~~~~~~lG~~~i~l~~l~~~~--~~~~~~~~l~~~~~ 136 (138)
T 1ugk_A 102 ----FSRDDIIGEVLIPLSGIELSE--GKMLMNREIISGPS 136 (138)
T ss_dssp ----SCCCCCCEEEEEECTTCCCTT--CCEEEEEECBSSSS
T ss_pred ----CCCCcEEEEEEEehhHccCCC--CcchhhhhhhcCCC
Confidence 567789999999999997642 34577899987643
No 31
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=96.60 E-value=0.01 Score=54.52 Aligned_cols=102 Identities=13% Similarity=0.214 Sum_probs=71.3
Q ss_pred EEEEEEeecCCCCC-ccCCCceEEEEeccCC--Cc--cccccceeeeeeccccceeEEEEeec----cccEEEEEEecCC
Q 008023 335 VFVEIVAVKNLPED-HKDKGDLFVFFSKSQP--DI--FFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHST 405 (580)
Q Consensus 335 v~l~iv~~knl~~~-~~~~~~lfVr~~~~q~--d~--~~~~~~~~~i~s~s~~~~~~~lqCE~----t~~lvlElr~~~~ 405 (580)
+.|.|++++||+.. .....+-||+++.... ++ ..+.+ ...=+.++.|++.+.|.... ...|.|++.-+..
T Consensus 45 L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~-v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~ 123 (155)
T 2z0u_A 45 FAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTR-PLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR 123 (155)
T ss_dssp EEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECC-CEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT
T ss_pred EEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCC-cCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC
Confidence 67788999999854 2233688999997643 32 11111 11113467999999888653 4578899887654
Q ss_pred CCcccCCCcccceeEEeecccccCCCCcceEEEEEeecc
Q 008023 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (580)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~ 444 (580)
+++..+||.+.|+++++... .-..+.|++|.|
T Consensus 124 -----~~~~d~iG~~~i~l~~l~~~--~~~~~~W~~L~~ 155 (155)
T 2z0u_A 124 -----SHLEECLGGAQISLAEVCRS--GERSTRWYNLLS 155 (155)
T ss_dssp -----TSCEEEEEEEEEECTTSCTT--CCCEEEEEEEBC
T ss_pred -----CCCCcEEEEEEEEHHHccCC--CCccccceEccC
Confidence 56788999999999999642 346789999864
No 32
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.59 E-value=0.008 Score=53.22 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=72.8
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccc--------cccceeee---eeccccceeEEEE-ee----ccccE
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFF--------NAKQKLTI---LSKSGMKQVASFQ-CE----ATGEL 396 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~--------~~~~~~~i---~s~s~~~~~~~lq-CE----~t~~l 396 (580)
.+.|.|++++||+... ....+-||.++....+..+ ....+..+ +.++.|++.+.|. .. ....|
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l 98 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTL 98 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEE
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEE
Confidence 3778899999998652 2236889999966432110 00011111 4567999988886 22 35689
Q ss_pred EEEEEecCCCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 008023 397 LFELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 397 vlElr~~~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
.|+|.-+.. +++...||.+.|++.++... -..++|++|.+.++
T Consensus 99 ~i~V~d~d~-----~~~~~~lG~~~i~l~~l~~~---~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 99 EVTVWDYDR-----FSSNDFLGEVLIDLSSTSHL---DNTPRWYPLKEQTE 141 (142)
T ss_dssp EEEEEEECS-----SSCEEEEEEEEEETTSCGGG---TTCCEEEECBCCCC
T ss_pred EEEEEECCC-----CCCCceEEEEEEeccccccC---CCCCeEEECCccCC
Confidence 999987765 56778999999999998753 24679999988654
No 33
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=96.26 E-value=0.034 Score=49.19 Aligned_cols=101 Identities=14% Similarity=0.112 Sum_probs=68.4
Q ss_pred EEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEe--ec---cccEEEEEEecCC
Q 008023 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQC--EA---TGELLFELVSHST 405 (580)
Q Consensus 335 v~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqC--E~---t~~lvlElr~~~~ 405 (580)
+.|.|++++||+... ....+-||+++......... ..+..+ +.++.|++.+.|.. .. ...|.|+|..+..
T Consensus 31 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 109 (142)
T 2chd_A 31 LQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSN-KLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK 109 (142)
T ss_dssp EEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGG-EEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT
T ss_pred EEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcc-eeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC
Confidence 677889999998652 22368899999763211111 111222 44678999988872 21 3689999987754
Q ss_pred CCcccCCCcccceeEEeecccccCCCCcceEEEEEeecc
Q 008023 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (580)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~ 444 (580)
+++...||.++|+++++... =..+-|++|..
T Consensus 110 -----~~~d~~iG~~~i~l~~l~~~---~~~~~~~~L~~ 140 (142)
T 2chd_A 110 -----FGHNEFIGETRFSLKKLKAN---QRKNFNICLER 140 (142)
T ss_dssp -----TSCEEEEEEEEEEGGGCCTT---CCEEEEEECBC
T ss_pred -----CCCCcEEEEEEEEHHHcCCC---CccEEEEeccc
Confidence 45678999999999999864 25777777654
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=96.18 E-value=0.018 Score=56.82 Aligned_cols=105 Identities=18% Similarity=0.266 Sum_probs=71.9
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~ 405 (580)
.+.|.|++++||+... ....+-||+++......... +.+..+ +.++.|++.+.|.+.. ...|.|+|.-+..
T Consensus 151 ~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 229 (284)
T 2r83_A 151 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLK-KKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 229 (284)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCS
T ss_pred ceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEee-eeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCC
Confidence 3677889999998542 22368899998653221111 111222 3467899999998863 3468888887654
Q ss_pred CCcccCCCcccceeEEeecc----------cccCCCCcceEEEEEeeccC
Q 008023 406 SKIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVPR 445 (580)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~----------dll~~~~~Ls~E~w~~L~~~ 445 (580)
+++..+||.+.|+.+ +|+.. |.-.+++|+.|.+.
T Consensus 230 -----~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~-~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 230 -----IGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQVE 273 (284)
T ss_dssp -----SSCCCEEEEEEEETTCCHHHHHHHHHHHHS-TTSCEEEEEECBCH
T ss_pred -----CCCCcEEEEEEECCCCCCcHHHHHHHHHHC-CCCchheeeecCCc
Confidence 567889999999965 45654 56788999999875
No 35
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=95.80 E-value=0.061 Score=47.75 Aligned_cols=101 Identities=17% Similarity=0.162 Sum_probs=69.2
Q ss_pred EEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCCCC
Q 008023 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (580)
Q Consensus 335 v~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~~~ 407 (580)
+.|.|+++++...... .+-||+++....+..-. .+..+ +.++.|++.+.|.... ...|.|+|.-+..
T Consensus 28 L~V~v~~a~~~d~~g~--sDPyv~v~l~~~~~~~~--~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~-- 101 (138)
T 1wfm_A 28 LFVTRLEAVTSNHDGG--CDCYVQGSVANRTGSVE--AQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR-- 101 (138)
T ss_dssp EEEEEEEEECCCCSSC--CCEEEEEEEEETTEEEE--EECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS--
T ss_pred EEEEEEEEEcCCCCCC--cceEEEEEEEcCCCccc--EecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC--
Confidence 6777889887554444 78899998753222110 11222 3467899999998653 3578888877643
Q ss_pred cccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
+++..+||.+.|++.++... -..+.|++|.+...
T Consensus 102 ---~~~dd~lG~~~i~l~~l~~~---~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 102 ---FSRHSVAGELRLGLDGTSVP---LGAAQWGELKTSGP 135 (138)
T ss_dssp ---SCTTSCSEEEEEESSSSSSC---TTCCEEEECCCCSC
T ss_pred ---CCCCcEEEEEEEEcccccCc---ccccceeeCcCCCc
Confidence 56778999999999998532 35689999987543
No 36
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=95.11 E-value=0.011 Score=59.20 Aligned_cols=107 Identities=19% Similarity=0.263 Sum_probs=71.9
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~ 405 (580)
.+.|.|++++||+... ....+-||+++......... +.+..+ +.++.|++.+.|.... ...|.|+|.-+..
T Consensus 153 ~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 231 (296)
T 1dqv_A 153 LLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLK-KRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDC 231 (296)
T ss_dssp EEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTS-CEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCS
T ss_pred eeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCcc-ceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCC
Confidence 4677789999997542 22358999999763222111 112222 3457899988887653 2468899887654
Q ss_pred CCcccCCCcccceeEEee-----------cccccCCCCcceEEEEEeeccCCC
Q 008023 406 SKIPMTGASKTMGTASLS-----------LQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 406 ~~l~~~~~sk~lG~~sis-----------w~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
+++..+||.+.|+ |.+|+.. |.-.+++|..|.+..+
T Consensus 232 -----~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~-~~~~~~~w~~L~~~~~ 278 (296)
T 1dqv_A 232 -----IGHNEVIGVCRVGPEAADPHGREHWAEMLAN-PRKPVEHWHQLVEEKT 278 (296)
T ss_dssp -----SSCCEEEEECCCSSCTTCHHHHHHHHTSSSS-SSSCSCSCCCCBBCC-
T ss_pred -----CCCCceEEEEEECCccCCchhHHHHHHHHhC-CCCceeEeeeccCccc
Confidence 5677899999988 5566654 5778888888887655
No 37
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=94.25 E-value=0.5 Score=41.87 Aligned_cols=95 Identities=17% Similarity=0.108 Sum_probs=64.9
Q ss_pred EEEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceee--eeeccccceeEEEEee-ccccEEEEEEecCCCCccc
Q 008023 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLT--ILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPM 410 (580)
Q Consensus 334 ev~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~--i~s~s~~~~~~~lqCE-~t~~lvlElr~~~~~~l~~ 410 (580)
.++|.|+++++++...+ .+-||.++ .+. . +.+.. =+.++.|++.+.|... +...|.|++.-+.
T Consensus 6 ~L~V~V~~A~~l~~~g~--~DPYv~v~-~~~--~---kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d------ 71 (131)
T 2cjt_A 6 LLCVGVKKAKFDGAQEK--FNTYVTLK-VQN--V---KSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG------ 71 (131)
T ss_dssp EEEEEEEEEECSSCGGG--CEEEEEEE-ETT--E---EEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC------
T ss_pred EEEEEEEEeECCCCCCC--cCeEEEEE-ecC--E---EEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC------
Confidence 37788899999975444 68999998 221 1 11111 1346799999999887 5567999988764
Q ss_pred CCCcccceeEEeecccccCCCCcceEEEEEeec
Q 008023 411 TGASKTMGTASLSLQNFISPISKLAVEQWFDLV 443 (580)
Q Consensus 411 ~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~ 443 (580)
+.+...||.+.|+++++.... .-....|.++.
T Consensus 72 ~~~dd~iG~~~i~l~~l~~~~-~~~~~~~~~~~ 103 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQSN-EEGPGEWLTLD 103 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCBCS-SCCCCEEEECB
T ss_pred CCCCCeEEEEEEEHHHhhhcC-CCCccccEEcc
Confidence 245789999999999997643 12222455553
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=94.25 E-value=0.38 Score=47.98 Aligned_cols=121 Identities=15% Similarity=0.209 Sum_probs=77.9
Q ss_pred EEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 008023 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (580)
Q Consensus 334 ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE~----t~~lvlElr~~~~ 405 (580)
++.|.|++++||+... ....+-||+++.. +|..- ..+..+ +.++.|++.+.|.... ...|.|+|.-+..
T Consensus 21 ~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~-~~~~~--~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 21 QLVVRILQALDLPAKDSNGFSDPYVKIYLL-PDRKK--KFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR 97 (296)
T ss_dssp EEEEEEEEEECCCCCSTTSCCCEEEEEECT-TSTTS--CEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS
T ss_pred EEEEEEEEeECCCCcCCCCCcCeEEEEEEE-cCCCe--eEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC
Confidence 4788889999998652 2236789999975 33111 111222 3567999999999863 3489999887654
Q ss_pred CCcccCCCcccceeEEee-cccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEeecCC
Q 008023 406 SKIPMTGASKTMGTASLS-LQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (580)
Q Consensus 406 ~~l~~~~~sk~lG~~sis-w~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpP 465 (580)
+++..+||.+.|+ +.++... .-..+.|++|.+..+.. ...-.+.+.++..|+
T Consensus 98 -----~~~~~~iG~~~i~~l~~~~~~--~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 98 -----FSRHDLIGQVVLDNLLELAEQ--PPDRPLWRDILEGGSEK-ADLGELNFSLCYLPT 150 (296)
T ss_dssp -----SSCCCEEEEEECCCTTGGGSS--CSSCCCCEECBCCSSCC-SCCCEEEEEEEEETT
T ss_pred -----CCCCceEEEEEeccccccccC--Cccceeeeccccccccc-cccceEEEEEEeccc
Confidence 5677899999995 5455542 23467899997754321 122356666665554
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=91.60 E-value=0.69 Score=42.97 Aligned_cols=82 Identities=18% Similarity=0.103 Sum_probs=60.4
Q ss_pred EEEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee-ccccEEEEEEecCCCCcc
Q 008023 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-ATGELLFELVSHSTSKIP 409 (580)
Q Consensus 334 ev~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~lqCE-~t~~lvlElr~~~~~~l~ 409 (580)
-++|.|+++++++...+ .+-||.++ .|. . + +..+ ..++.|++.+.|... ....|.|+|.-+.
T Consensus 15 ~L~V~V~~A~~l~~~g~--~DPYV~v~-~~~--~---k-t~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d----- 80 (167)
T 2cjs_A 15 LLCVGVKKAKFDGAQEK--FNTYVTLK-VQN--V---E-STTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG----- 80 (167)
T ss_dssp EEEEEEEEEECSSCGGG--CEEEEEEE-ETT--E---E-EECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-----
T ss_pred EEEEEEEEEECCCCCCC--CCeEEEEE-ecc--e---E-EEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-----
Confidence 37778899999975444 68999998 221 1 1 1112 346799999999987 5678999988764
Q ss_pred cCCCcccceeEEeecccccCC
Q 008023 410 MTGASKTMGTASLSLQNFISP 430 (580)
Q Consensus 410 ~~~~sk~lG~~sisw~dll~~ 430 (580)
+.+..+||.+.|+++++...
T Consensus 81 -~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 -LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp -SSCCEEEEEEEEEGGGSCBC
T ss_pred -CCCCceEEEEEEEHHHhccc
Confidence 24578999999999999764
No 40
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=91.32 E-value=0.64 Score=49.55 Aligned_cols=107 Identities=11% Similarity=0.146 Sum_probs=72.2
Q ss_pred eEEEEEEEEEeecCCCCCc-cCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEeec--cccEEEEEEecCCCC
Q 008023 331 KIVEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEA--TGELLFELVSHSTSK 407 (580)
Q Consensus 331 ~~~ev~l~iv~~knl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~lqCE~--t~~lvlElr~~~~~~ 407 (580)
.+-.+.|.|++++||+... ....+-||.++.. +.+ ...+ ...=+.++.|++.+.|.... ...|.|+|.-+..
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~-~~~-~~T~-~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~-- 459 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMG-SQS-YTTR-TIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ-- 459 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-TEE-EECC-CCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS--
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEEC-Cee-ccCC-ccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC--
Confidence 3345788899999997552 2336789999853 211 1110 11113567999999998873 3468888876554
Q ss_pred cccCCCcccceeEEeecccccCCC-CcceEEEEEeeccC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPI-SKLAVEQWFDLVPR 445 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~-~~Ls~E~w~~L~~~ 445 (580)
+++...||.+++++.++.... +.-.++.|+.|...
T Consensus 460 ---~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~ 495 (510)
T 3jzy_A 460 ---FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV 495 (510)
T ss_dssp ---SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS
T ss_pred ---CCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC
Confidence 567789999999999998532 12347899998765
No 41
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=91.00 E-value=1.1 Score=41.61 Aligned_cols=118 Identities=16% Similarity=0.234 Sum_probs=71.3
Q ss_pred EEEEEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceee-eeeccccceeEEEEeec----cccEEEEEEecCCC
Q 008023 332 IVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLT-ILSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (580)
Q Consensus 332 ~~ev~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~-i~s~s~~~~~~~lqCE~----t~~lvlElr~~~~~ 406 (580)
-|.+.|-|..++|+|-.+. .-.-|.|+ +.++. .+.++ -.-++-|++++.+-=-+ ...|.++|..+..
T Consensus 20 ~msL~V~l~~a~~Lpg~~D--p~akv~FR---g~k~k--Tkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~- 91 (144)
T 3l9b_A 20 HMALIVHLKTVSELRGRAD--RIAKVTFR---GQSFY--SRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK- 91 (144)
T ss_dssp CEEEEEEEEEEESCCSCEE--EEEEEEET---TEEEE--CCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT-
T ss_pred cEEEEEEEEEecCCCCCCC--CeEEEEEe---cccee--eEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc-
Confidence 3566777789999995443 12223332 22211 12232 23456778866553222 3456666666555
Q ss_pred CcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEeecCCc
Q 008023 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPT 466 (580)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpPv 466 (580)
+.+.++||++.+++++|..+ +.|++. ..|...++.... ..+-+.++-.||-
T Consensus 92 ----v~~nrlIG~~~i~Lq~lv~~-~~l~l~--~~LvD~n~~~~~--a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 92 ----VFSNKLIGTFRMVLQKVVEE-NRVEVS--DTLIDDNNAIIK--TSLSMEVRYQAAD 142 (144)
T ss_dssp ----TSCCEEEEEEEEESHHHHHH-SEEEEE--EEEECTTSCEEE--EEEEEEEEEEETT
T ss_pred ----ccCCCEEEEEEEEhHHhccC-CeEEEe--ecccCCCCCccc--cEEEEEEEecCCC
Confidence 55789999999999999997 577765 577666553211 4666777767764
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=88.29 E-value=1.3 Score=50.83 Aligned_cols=101 Identities=16% Similarity=0.109 Sum_probs=71.3
Q ss_pred EEEEEEEEeecCCCC---C-ccCCCceEEEEeccC-CCccccccceeee--eeccccceeEEEEeec--cccEEEEEEec
Q 008023 333 VEVFVEIVAVKNLPE---D-HKDKGDLFVFFSKSQ-PDIFFNAKQKLTI--LSKSGMKQVASFQCEA--TGELLFELVSH 403 (580)
Q Consensus 333 ~ev~l~iv~~knl~~---~-~~~~~~lfVr~~~~q-~d~~~~~~~~~~i--~s~s~~~~~~~lqCE~--t~~lvlElr~~ 403 (580)
-.+.|.|++++||+. . .....+-||.++... +....+ +-.+ +.++.|++.+.|.+.. ...|.|+|.-+
T Consensus 18 g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~k---Tkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 18 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKR---TRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp EEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEE---CCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred cEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEe---cceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 347788899999987 2 112368899998652 111111 1111 3567999999999883 56888888876
Q ss_pred CCCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccC
Q 008023 404 STSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (580)
Q Consensus 404 ~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~ 445 (580)
.. ++ ...||.+.|++.+|.. .-..+.|++|.+.
T Consensus 95 D~-----~~-ddfIG~v~I~L~~L~~---g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NY-----VM-DETLGTATFTVSSMKV---GEKKEVPFIFNQV 127 (749)
T ss_dssp CS-----SS-CEEEEEECCBSTTSCT---TCCCCEEEEETTT
T ss_pred CC-----CC-CceeEEEEEEHHHcCC---CCceEEEEecCCC
Confidence 54 45 7899999999999964 3457899999875
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=86.46 E-value=4.4 Score=45.35 Aligned_cols=121 Identities=14% Similarity=0.162 Sum_probs=78.3
Q ss_pred CCceEEEEEEEEEeecCCCCCc---cCCCceEEEEeccC-C-Cccccccceeee--e-eccccceeEEEEee-cc-ccEE
Q 008023 328 PDLKIVEVFVEIVAVKNLPEDH---KDKGDLFVFFSKSQ-P-DIFFNAKQKLTI--L-SKSGMKQVASFQCE-AT-GELL 397 (580)
Q Consensus 328 ~~~~~~ev~l~iv~~knl~~~~---~~~~~lfVr~~~~q-~-d~~~~~~~~~~i--~-s~s~~~~~~~lqCE-~t-~~lv 397 (580)
+.+....+.|.|++++|||... ....+-||.+.... + |... .++-.+ . .++.|++.+.|.+. +. .-|.
T Consensus 492 ~~~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~--~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~ 569 (624)
T 1djx_A 492 PWWRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGS--RQTAVITNNGFNPRWDMEFEFEVTVPDLALVR 569 (624)
T ss_dssp TTCCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEE--EECCCCTTCSSSCEEEEEEEEEESCGGGCEEE
T ss_pred CCccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcce--eecccccCCCCCCccCceEEEEEecCCCCEEE
Confidence 3344556889999999998553 23467899998642 2 2111 111222 2 46789999999887 43 4677
Q ss_pred EEEEecCCCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEee
Q 008023 398 FELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSF 462 (580)
Q Consensus 398 lElr~~~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~ 462 (580)
|+|.-+.. +.+...||.+.|++.+|.. . .+|++|...+|..- ...+|.|-++|
T Consensus 570 ~~V~D~D~-----~~~dd~iG~~~ipl~~L~~-G-----~r~v~L~d~~g~~~-~~~~L~v~i~~ 622 (624)
T 1djx_A 570 FMVEDYDS-----SSKNDFIGQSTIPWNSLKQ-G-----YRHVHLLSKNGDQH-PSATLFVKISI 622 (624)
T ss_dssp EEEEECCS-----SSCCEEEEEEEEEGGGBCC-E-----EEEEEEECTTSCEE-EEEEEEEEEEE
T ss_pred EEEEEcCC-----CCCCceeEEEEEEHHHcCC-C-----cEEEeCCCCCcCCC-CceEEEEEEEE
Confidence 88876643 4667899999999999864 2 37999977665311 12355555544
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=85.26 E-value=0.15 Score=55.08 Aligned_cols=99 Identities=13% Similarity=0.194 Sum_probs=11.6
Q ss_pred EEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceeee--e---eccccceeEEEEee-ccccEEEEEEecCCCCc
Q 008023 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI--L---SKSGMKQVASFQCE-ATGELLFELVSHSTSKI 408 (580)
Q Consensus 335 v~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i--~---s~s~~~~~~~lqCE-~t~~lvlElr~~~~~~l 408 (580)
+.|.|++++||+... +-||.++... .... ++..+ + .++.|++.+.|.+. +...|.++|..+....
T Consensus 13 L~V~VieAk~L~~~d----dpYv~v~l~~-~~~~---kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~- 83 (483)
T 3bxj_A 13 LKLWIIEARELPPKK----RYYCELCLDD-MLYA---RTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK- 83 (483)
T ss_dssp C-----------------------------------------------------CCEECC--------------------
T ss_pred EEEEEEEcCCcCCCC----CCeEEEEECC-eEEe---eeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc-
Confidence 677889999998543 4577766421 1111 11222 2 47899999999987 3567777776532100
Q ss_pred ccCCCcccceeEEeecccccCCCCcceEEEEEeeccC
Q 008023 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (580)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~ 445 (580)
..+.+...||.+.|+.+++... -..+.|++|...
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~---~~~~~W~~L~~~ 117 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGR---HFTEQWYPVTLP 117 (483)
T ss_dssp --------------------------CCEECC-----
T ss_pred ccCCCCceEEEEEEEHHHhcCC---CCCCeEEECCCC
Confidence 0145667899999999999853 358999999543
No 45
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=84.01 E-value=20 Score=39.46 Aligned_cols=123 Identities=11% Similarity=0.030 Sum_probs=86.1
Q ss_pred EEEEEEEEEeecCCCCCccCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEe-e--ccccEEEEEEecCCCCc
Q 008023 332 IVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQC-E--ATGELLFELVSHSTSKI 408 (580)
Q Consensus 332 ~~ev~l~iv~~knl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~lqC-E--~t~~lvlElr~~~~~~l 408 (580)
+-.+.|.|++++||+.+.....+-||.++... ...+-+ .+.=+.++.|++.+.|.- + ....|.|||.-...
T Consensus 393 ~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~--~~~kTk-vik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~--- 466 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWGDYTTATDAYLKVFFGG--QEFRTG-VVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY--- 466 (540)
T ss_dssp EEEEEEEEEEEESCCCSSCSCCCEEEEEEETT--EEEECC-CBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS---
T ss_pred ccEEEEEEEEccCCCcccCCCcCeEEEEEECC--Eeeeee-eecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC---
Confidence 55678889999999864222368899998642 112111 111134679999998874 3 46789999866544
Q ss_pred ccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCeeEEEEEeecCCcccchhhcccc
Q 008023 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPTLAPHLLRMVR 476 (580)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpPvqApy~l~~v~ 476 (580)
+++..+||.+.++++ + =+++.|+.|.. |. +.+++-+.+-|=.+.++=+.-+|
T Consensus 467 --~~~dD~LG~~~~~L~----~---g~~~~~~~l~~--G~-----l~~~~~~~c~p~l~g~~c~~y~~ 518 (540)
T 3nsj_A 467 --GWDDDLLGSCDRSPH----S---GFHEVTCELNH--GR-----VKFSYHAKCLPHLTGGTCLEYAP 518 (540)
T ss_dssp --SSCCEEEEEEEECCC----S---EEEEEEEECSS--SE-----EEEEEEEEECTTEESTTSCEECC
T ss_pred --CCCCCEEEEEEEEee----C---CcEEEEEEcCC--eE-----EEEEEEEEECCCCCCChhhhcCC
Confidence 356679999999985 2 24788998653 22 88888888888888888888888
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=78.40 E-value=5 Score=44.77 Aligned_cols=103 Identities=22% Similarity=0.291 Sum_probs=69.5
Q ss_pred EEEEEEeecCCCCC-ccCCCceEEEEeccCCCccccccceee-e--eeccccceeEEEEeec---cccEEEEEEecCCCC
Q 008023 335 VFVEIVAVKNLPED-HKDKGDLFVFFSKSQPDIFFNAKQKLT-I--LSKSGMKQVASFQCEA---TGELLFELVSHSTSK 407 (580)
Q Consensus 335 v~l~iv~~knl~~~-~~~~~~lfVr~~~~q~d~~~~~~~~~~-i--~s~s~~~~~~~lqCE~---t~~lvlElr~~~~~~ 407 (580)
+.|.++.++||+.. .....+-||.++... +.....+.+.. + +.++.|++.+.|+-.. ...|.+|+.-...
T Consensus 174 L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p-~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~-- 250 (674)
T 3pfq_A 174 LIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-- 250 (674)
T ss_dssp EEEEEEEEESCCCCSTTSSCCEEEEEEEES-CSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS--
T ss_pred eeeeeecccccCCCCcccccCccccccccc-CccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc--
Confidence 56678899998754 223468899998642 21111111121 2 3466899988887652 3468888876543
Q ss_pred cccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 008023 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
+.+..+||.++|+.+++... ..+.|+.|.....
T Consensus 251 ---~~~dd~iG~~~i~l~~l~~~----~~~~w~~Lls~~~ 283 (674)
T 3pfq_A 251 ---TSRNDFMGSLSFGISELQKA----GVDGWFKLLSQEE 283 (674)
T ss_dssp ---SSCCEECCBCCCBTTHHHHC----CEEEEEECBCTTG
T ss_pred ---ccccccccccccchhhhccC----Ccccceeeccccc
Confidence 56788999999999999974 2489999977644
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=24.13 E-value=4.2e+02 Score=30.89 Aligned_cols=113 Identities=13% Similarity=0.069 Sum_probs=72.7
Q ss_pred EEEEEEEeecCCCCCccCCCceEEEEeccC--CCccccccceeeee---eccccce-eEEEE-ee-c-cccEEEEEEecC
Q 008023 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ--PDIFFNAKQKLTIL---SKSGMKQ-VASFQ-CE-A-TGELLFELVSHS 404 (580)
Q Consensus 334 ev~l~iv~~knl~~~~~~~~~lfVr~~~~q--~d~~~~~~~~~~i~---s~s~~~~-~~~lq-CE-~-t~~lvlElr~~~ 404 (580)
.+.|.|+.+.||+... .+-||.+.... .|..-.. ++-.+. -++.|++ .+.|. +. + ..-|.|+|.-+.
T Consensus 726 ~L~V~Visaq~L~~~~---~DPYV~V~l~g~p~D~~~k~-kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d 801 (885)
T 3ohm_B 726 ALRVKVISGQFLSDRK---VGIYVEVDMFGLPVDTRRKY-RTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG 801 (885)
T ss_dssp EEEEEEEEEESCCSSC---CCEEEEEEEESSTTTCBCCC-CCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT
T ss_pred EEEEEEEEeccCcccC---CCcEEEEEEeCCCcccccce-eeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC
Confidence 4778889999998642 57899988552 2321111 122332 3578998 78998 53 3 346888888753
Q ss_pred CCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCC-CCCCeeEEEEEeecCC
Q 008023 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNV-SSKPISLRIAVSFTIP 465 (580)
Q Consensus 405 ~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~-~~~p~~lrva~S~TpP 465 (580)
...||.+.|++..|.. . .++++|...+|.. ..--+-|+|.+.--+|
T Consensus 802 ---------ddfiG~~~lpL~~L~~-G-----yR~vpL~~~~g~~l~~atLfv~i~~~~~~~ 848 (885)
T 3ohm_B 802 ---------GKFVGHRILPVSAIRS-G-----YHYVCLRNEANQPLCLPALLIYTEASDYIP 848 (885)
T ss_dssp ---------TEEEEEEEEETTTCCC-E-----EEEEEEECTTSCEEEEEEEEEEEEEEECCC
T ss_pred ---------ccEEeeEEEEHHHcCC-C-----ceEEEecCCCCCccCceEEEEEEEEEecCC
Confidence 4679999999988763 2 6789998776642 2223556666653333
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=23.21 E-value=3.6e+02 Score=31.11 Aligned_cols=111 Identities=11% Similarity=0.054 Sum_probs=71.4
Q ss_pred EEEEEEEEeecCCCCCccCCCceEEEEeccC--CCccccccceeeee---ecccccee-EEEE-ee-c-cccEEEEEEec
Q 008023 333 VEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ--PDIFFNAKQKLTIL---SKSGMKQV-ASFQ-CE-A-TGELLFELVSH 403 (580)
Q Consensus 333 ~ev~l~iv~~knl~~~~~~~~~lfVr~~~~q--~d~~~~~~~~~~i~---s~s~~~~~-~~lq-CE-~-t~~lvlElr~~ 403 (580)
..+.|.|+.++||+.. + .+-||.+.... .|..-.-.++-.+. .++.|++. +.|. .. + ..-|.|+|.-+
T Consensus 650 ~~L~V~Visaq~L~~~-~--~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~ 726 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK-Q--ISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEE 726 (816)
T ss_dssp EEEEEEEEEEECCCSS-C--CCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEcccCCCC-C--CCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEec
Confidence 3478889999999864 2 57899988542 23100000122232 35789986 8887 43 3 24678888875
Q ss_pred CCCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCC-CCCeeEEEEEe
Q 008023 404 STSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVS-SKPISLRIAVS 461 (580)
Q Consensus 404 ~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~-~~p~~lrva~S 461 (580)
. ...||.+.|+++.|.. . .++++|...+|..- .--+-++|.+.
T Consensus 727 d---------ddfiG~~~ipL~~L~~-G-----yR~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 727 N---------GKFIGHRVMPLDGIKP-G-----YRHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp T---------SCEEEEEEEESTTCCC-E-----EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred C---------CCeeeEEEEEHHHcCC-c-----ceEEEEeCCCCCCCCceEEEEEEEEE
Confidence 3 4679999999988774 2 58899988766422 23356677666
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=22.59 E-value=4.6e+02 Score=30.03 Aligned_cols=96 Identities=16% Similarity=0.117 Sum_probs=64.1
Q ss_pred EEEEEEEeecCCCCCccCCCceEEEEeccC-C-Cccccccceeeee---eccccce-eEEE-Eee-c-cccEEEEEEecC
Q 008023 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ-P-DIFFNAKQKLTIL---SKSGMKQ-VASF-QCE-A-TGELLFELVSHS 404 (580)
Q Consensus 334 ev~l~iv~~knl~~~~~~~~~lfVr~~~~q-~-d~~~~~~~~~~i~---s~s~~~~-~~~l-qCE-~-t~~lvlElr~~~ 404 (580)
.+.|.|+.++|||.+. .+-||.+.... | |..-..+.++.+. .++.|++ .+.| ... + ..-|.|+|.-+.
T Consensus 679 ~L~V~Visa~~L~~~~---~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d 755 (799)
T 2zkm_X 679 TLSITVISGQFLSERS---VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG 755 (799)
T ss_dssp EEEEEEEEEESCCSSC---CCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT
T ss_pred eEEEEEEeccccCccC---CCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC
Confidence 3678889999999643 57899998642 2 4211112221342 4678998 7888 543 3 236778887763
Q ss_pred CCCcccCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 008023 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (580)
Q Consensus 405 ~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (580)
...||.+.|+++.|.. . .+|++|...+|
T Consensus 756 ---------~d~iG~~~ipl~~L~~-G-----~r~v~L~~~~g 783 (799)
T 2zkm_X 756 ---------NKFLGHRIIPINALNS-G-----YHHLCLHSESN 783 (799)
T ss_dssp ---------TEEEEEEEEEGGGBCC-E-----EEEEEEECTTC
T ss_pred ---------CCccceEeeehhhcCC-C-----cEEEeccCCCC
Confidence 4679999999998863 2 57999976655
Done!