BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008025
(580 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225456155|ref|XP_002282402.1| PREDICTED: translocon at the outer membrane of chloroplasts 64
[Vitis vinifera]
gi|297734325|emb|CBI15572.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/589 (78%), Positives = 521/589 (88%), Gaps = 10/589 (1%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MAS SANLWVLLGLGLAG+LLMT+KLKK I++DFGAF+++LQLLPPPQP PPKAPHPLT
Sbjct: 1 MASSSANLWVLLGLGLAGVLLMTRKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTN 60
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
LSFAVSD+FDIEGYVTGFG+P+WARTH ASRTS VVS LVEGGATC GKTVVDE AYSI
Sbjct: 61 LSFAVSDVFDIEGYVTGFGNPDWARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSI 120
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
NG NKHY TPTNPAAPS++PGGSSSGAAVAVAA+ VDFSLG+DTVGGVRVP+AFCG++GF
Sbjct: 121 NGENKHYGTPTNPAAPSRIPGGSSSGAAVAVAANFVDFSLGLDTVGGVRVPAAFCGVIGF 180
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RPS+GAVSHMGII +S+SLDTVGWFA+DP ILR VGHVLLQL +A QRSPRQII ADDCF
Sbjct: 181 RPSHGAVSHMGIIHVSSSLDTVGWFAKDPSILRRVGHVLLQLTYAVQRSPRQIIFADDCF 240
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH--KTNGELKN--- 295
+ L+IP DRV QVV+KSTEKLFGRQVLK ENL Y DSKVPSLK FH KTNGE +N
Sbjct: 241 QSLRIPVDRVYQVVLKSTEKLFGRQVLKRENLENYLDSKVPSLKAFHSQKTNGETRNSLI 300
Query: 296 -----VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
+M +QR+EFK+NH EWI SVKP LD IS+++ ++LE+++T IENC+S R E+R
Sbjct: 301 RSLVKIMHCLQRHEFKHNHEEWINSVKPILDASISSQLHDVLEVADTEIENCQSSRMEIR 360
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
SA++SLLKDDGILV PT A PPPKLGGKE LSE+YQNR LLSIAS+SGCCQVTVPLG
Sbjct: 361 SALNSLLKDDGILVIPTVADPPPKLGGKESLSEEYQNRTLGLLSIASMSGCCQVTVPLGL 420
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
YDK P SVSF+ARHGGDRFLLDTVQ MYASLQEQADIA KSKLS+N +++ SAEIAKEK
Sbjct: 421 YDKYPVSVSFMARHGGDRFLLDTVQTMYASLQEQADIAAKSKLSSNAVDRETSAEIAKEK 480
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQA+KDKQW KA+ FYTEAIKL+GNNATYYSNRAAAYLE GSFLQAEADCT+AINLDKK
Sbjct: 481 GNQAFKDKQWQKAVGFYTEAIKLSGNNATYYSNRAAAYLEMGSFLQAEADCTEAINLDKK 540
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
NVKAYLRRGTAREMLGYYK+AIEDF YALVLEPTNKRASLSADRL+K+F
Sbjct: 541 NVKAYLRRGTAREMLGYYKDAIEDFRYALVLEPTNKRASLSADRLKKLF 589
>gi|255579275|ref|XP_002530483.1| amidase, putative [Ricinus communis]
gi|223529980|gb|EEF31906.1| amidase, putative [Ricinus communis]
Length = 589
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/589 (76%), Positives = 516/589 (87%), Gaps = 11/589 (1%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
M S ANLWVLLGLG+AGILL+TKKLKK I++DFGAF++KLQLLPPP P PPKAPHPLTG
Sbjct: 1 MGSNPANLWVLLGLGIAGILLVTKKLKKVIREDFGAFVQKLQLLPPPPPAPPKAPHPLTG 60
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FAVSD+FDIEGYVTGFGHP+WARTH AAS+TS VVS LVEGGATCIGKTVVDE AYSI
Sbjct: 61 LTFAVSDVFDIEGYVTGFGHPDWARTHEAASQTSLVVSALVEGGATCIGKTVVDELAYSI 120
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
NG N+HY TPTNPA P+++PGGSSSGAAVAVAA+LVDFSLG+DTVGGVRVP+ FCGI+GF
Sbjct: 121 NGENEHYGTPTNPAVPARVPGGSSSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCGIIGF 180
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RPSYGA+ + GI+PIS SLDTVGWFARDP ++R VGH+LLQLPF QR+P+QIIIADDCF
Sbjct: 181 RPSYGAIPNTGILPISASLDTVGWFARDPNVIRRVGHLLLQLPFGVQRNPKQIIIADDCF 240
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH--KTNGELK---- 294
+LLKIP DR+ QVVIKSTEK+FGRQVL+HE L + S+V SLK H KTNGEL+
Sbjct: 241 QLLKIPVDRIAQVVIKSTEKIFGRQVLRHEILEDVLFSRVRSLKLLHDQKTNGELRTSSI 300
Query: 295 ----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
N+MRL+ RYEF++NH EWI KP +D +ISA+I E+++I +T IE KSIR EMR
Sbjct: 301 RLLANIMRLLHRYEFRHNHEEWINIEKPNVDHNISAQIHEIVDIPDTEIEIFKSIRQEMR 360
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
+AI+SLLKDDGILV PTTA+ PPKLGGK+MLSEDYQ FSLLSIAS+SGCCQVT+PLG
Sbjct: 361 AAINSLLKDDGILVIPTTAHLPPKLGGKDMLSEDYQILLFSLLSIASLSGCCQVTIPLGL 420
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
Y+KCP SVSFIARHGGDRFL+DTVQNMY+SLQEQ D+ K K T+ NQ++SAE+AKEK
Sbjct: 421 YEKCPVSVSFIARHGGDRFLMDTVQNMYSSLQEQVDMLAKPKSHTSD-NQERSAEMAKEK 479
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQAYK+KQW KAIS+YTEAIKLNG NATYYSNRAAAYLE GSFLQAEADCTKAINLDKK
Sbjct: 480 GNQAYKEKQWQKAISYYTEAIKLNGKNATYYSNRAAAYLELGSFLQAEADCTKAINLDKK 539
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
NVKAYLRRGTAREM+GYYKEAIEDF YALVLEPTNKRA+LSA+RLRK+F
Sbjct: 540 NVKAYLRRGTAREMIGYYKEAIEDFQYALVLEPTNKRAALSAERLRKMF 588
>gi|224135565|ref|XP_002322105.1| amidase family protein [Populus trichocarpa]
gi|222869101|gb|EEF06232.1| amidase family protein [Populus trichocarpa]
Length = 592
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/589 (75%), Positives = 511/589 (86%), Gaps = 11/589 (1%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MAS ANLWVLLGLGLAGI L TKK KK +++DFGAFI KLQLLPPPQP PPKAPHPLTG
Sbjct: 1 MASNPANLWVLLGLGLAGIFLFTKKFKKVLREDFGAFIHKLQLLPPPQPAPPKAPHPLTG 60
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FAVSDLFDIEGYVTGFGHP+WA+TH AASRTS VVSTLVEGGATC+GKTV+DE AYSI
Sbjct: 61 LTFAVSDLFDIEGYVTGFGHPDWAKTHEAASRTSVVVSTLVEGGATCVGKTVIDELAYSI 120
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G NKHY TPTNP P+++PGGSSSGAAVAVAA+LVDFSLG+DTVGGVRVP+ FCGI+GF
Sbjct: 121 TGENKHYGTPTNPVEPARVPGGSSSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCGIIGF 180
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RPSYGA+S +G++P+S SLDTVGWFA+DP ILR VGHVLLQ F QRSPRQII+ADDCF
Sbjct: 181 RPSYGAISKIGVLPVSVSLDTVGWFAKDPNILRRVGHVLLQSAFGGQRSPRQIIMADDCF 240
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH--KTNGELK---- 294
+LLKIP DR+ QVV+KSTEK FGRQ+LKHE L Y +SKVPSLK FH KTNGE+K
Sbjct: 241 QLLKIPVDRIAQVVVKSTEKHFGRQLLKHEILDVYLNSKVPSLKEFHNKKTNGEVKTSSI 300
Query: 295 ----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
NVM+L+ RYEF++NH EWI +VKP L+P++SA++ E++E+S+ IE CKSIR EMR
Sbjct: 301 RLLANVMQLLHRYEFRSNHEEWINTVKPILEPNLSAQMNEIMELSDAEIELCKSIREEMR 360
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
SAI+SLLKDDGILV PTTAY PPKLGGKE+LSE+YQ+ +F LLSIAS+SGCCQVTVPLGY
Sbjct: 361 SAINSLLKDDGILVVPTTAYLPPKLGGKEILSEEYQSSSFGLLSIASLSGCCQVTVPLGY 420
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
Y+KCP SVS IARHG DRFLLDTVQ MY +LQEQA+ SK S+N +++ SAE+AKEK
Sbjct: 421 YNKCPVSVSLIARHGSDRFLLDTVQTMYKTLQEQAETYVNSK-SSNKDSRENSAEMAKEK 479
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQA+K++QW KAIS+Y EAIKLN NATYYSNRAAAYLE GSF AEADC+ AINLDKK
Sbjct: 480 GNQAFKEQQWQKAISYYNEAIKLNDKNATYYSNRAAAYLELGSFQHAEADCSNAINLDKK 539
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
NVKAYLRRGTAREMLGYYK+AIEDF YALVLEPTNKRASLSA+RL+KVF
Sbjct: 540 NVKAYLRRGTAREMLGYYKDAIEDFKYALVLEPTNKRASLSAERLQKVF 588
>gi|224118646|ref|XP_002317872.1| amidase family protein [Populus trichocarpa]
gi|222858545|gb|EEE96092.1| amidase family protein [Populus trichocarpa]
Length = 593
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/590 (75%), Positives = 509/590 (86%), Gaps = 12/590 (2%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNI-KQDFGAFIEKLQLLPPPQPLPPKAPHPLT 59
MAS SANLWVLLGLGLAGILLMTKK KK+I +QDFGAFIEKL L+PPPQP PPKAPHPLT
Sbjct: 1 MASNSANLWVLLGLGLAGILLMTKKFKKSIIRQDFGAFIEKLLLVPPPQPPPPKAPHPLT 60
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
L+FAVSDLF+IEGYV+GFGHPEWA+TH AASRTS VVSTLV+GGATC+GKTV+DE AYS
Sbjct: 61 ALTFAVSDLFEIEGYVSGFGHPEWAKTHQAASRTSLVVSTLVDGGATCVGKTVIDELAYS 120
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
I+G NKHY TP NP P+++PGGS SGAAVAVAA+LVDFSLG+DTVGGVRVP+ FCG++G
Sbjct: 121 IHGENKHYGTPINPVVPARVPGGSCSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCGVIG 180
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
FRPSYGA+S G++P+S SLDTVGWFA+DP ILR VGHVLLQ F QRSPRQII+A+DC
Sbjct: 181 FRPSYGAISKTGVLPVSASLDTVGWFAKDPNILRRVGHVLLQPAFGGQRSPRQIIMAEDC 240
Query: 240 FELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH--KTNGELK--- 294
F+LLKIP DRV QVV+ STEK FGRQVLKHE L Y +SKVPSLK FH K NG++K
Sbjct: 241 FQLLKIPVDRVAQVVVNSTEKHFGRQVLKHEILDVYLNSKVPSLKEFHNKKKNGDVKTSS 300
Query: 295 -----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
+VM+L+ RYEF++NH EWI + KP L+PD SA++ E+++ISE IE CKSIR EM
Sbjct: 301 IRLLAHVMQLLHRYEFRSNHEEWINTEKPILEPDFSAQMNEIMKISEAEIELCKSIREEM 360
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
R AI+SLLKDDGILV PT AY PPKL GKE+LSE+Y++ +FSLLSIAS+SGCCQVTVPLG
Sbjct: 361 RLAINSLLKDDGILVVPTMAYLPPKLDGKEILSEEYKSSSFSLLSIASLSGCCQVTVPLG 420
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKE 469
YYDKCP SVS IARHG DRFLLDT+Q MYASLQEQA+ KSK S NT + + SAE+AKE
Sbjct: 421 YYDKCPVSVSLIARHGNDRFLLDTLQTMYASLQEQAETHVKSK-SRNTDSGENSAEMAKE 479
Query: 470 KGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDK 529
KGNQA+K+KQW KAIS+Y EAIKLN NATYYSNRAAAYLE GSF QAEADC+KAINLDK
Sbjct: 480 KGNQAFKEKQWKKAISYYNEAIKLNDKNATYYSNRAAAYLELGSFHQAEADCSKAINLDK 539
Query: 530 KNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
KNVKAYLRRGTAREMLGYYK+AIEDF YALVLEPTNKRASLSA+RLRKVF
Sbjct: 540 KNVKAYLRRGTAREMLGYYKDAIEDFKYALVLEPTNKRASLSAERLRKVF 589
>gi|449497473|ref|XP_004160411.1| PREDICTED: translocon at the outer membrane of chloroplasts 64-like
[Cucumis sativus]
Length = 591
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/589 (74%), Positives = 506/589 (85%), Gaps = 10/589 (1%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MAS SANLWVLLGLGLAGILLMTKKLKK I++DFGAFIEK QLLPPPQP PPKAPHPLTG
Sbjct: 1 MASNSANLWVLLGLGLAGILLMTKKLKKAIREDFGAFIEKFQLLPPPQPAPPKAPHPLTG 60
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FAVSD+F+IEG+VTGFGHP+WA+TH AASRTS VVS LVEGGATCIGKTV +E + I
Sbjct: 61 LTFAVSDVFEIEGHVTGFGHPDWAKTHDAASRTSPVVSALVEGGATCIGKTVTNELSMGI 120
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
+G NK+Y+TPTNPA+ S++PGGSSSGAAVAVAA+LVDFSLGIDTVG VR+P++FCGILGF
Sbjct: 121 SGENKYYETPTNPASHSKVPGGSSSGAAVAVAANLVDFSLGIDTVGDVRIPASFCGILGF 180
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RPS+G+VS +GI+P+S SLDTVG FA+DP +LR VGHVLLQLP+A QR+PRQIIIADDCF
Sbjct: 181 RPSHGSVSQVGIVPVSLSLDTVGMFAKDPNVLRRVGHVLLQLPYAVQRNPRQIIIADDCF 240
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--HKTNGELK---- 294
+LLKIP DR+ Q V KSTEKLFGRQ LKHENLG Y SKVP+LK KTNG L
Sbjct: 241 QLLKIPVDRITQAVTKSTEKLFGRQALKHENLGSYLSSKVPNLKELIGKKTNGNLNSASI 300
Query: 295 ----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
N+M+ ++R EFK NH EWI+SVKP LD + ++ E LEIS+T+IE KS+RNEMR
Sbjct: 301 RVLANLMQTVERIEFKGNHGEWIDSVKPDLDSALMEQLNEKLEISDTMIEKFKSVRNEMR 360
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
AI+SLLKDDG+LV PTT PPPKLGGKE+ SE+YQ R FS LSIAS+SGCCQVT+PLG+
Sbjct: 361 MAINSLLKDDGVLVIPTTVDPPPKLGGKEIFSEEYQTRVFSSLSIASISGCCQVTLPLGF 420
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
+D CP SVSF+ARHG DRFLLD VQ MY SLQE+A+ A+KSK S N +Q+QSAEIAKEK
Sbjct: 421 HDSCPVSVSFLARHGADRFLLDIVQTMYKSLQEEAEAASKSKFSKNAVSQEQSAEIAKEK 480
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQAYK+KQW KAI YTEAIKLN NATYYSNRAAAYLE G F QAEADC+KAI+LDKK
Sbjct: 481 GNQAYKEKQWEKAIGCYTEAIKLNSRNATYYSNRAAAYLELGRFHQAEADCSKAIDLDKK 540
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
NVK+YLRRGTAREMLG+YKEAIEDFS+ALVLEPTNKRAS+SA+RLRK+F
Sbjct: 541 NVKSYLRRGTAREMLGFYKEAIEDFSHALVLEPTNKRASISAERLRKLF 589
>gi|357521651|ref|XP_003631114.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|355525136|gb|AET05590.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
Length = 594
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/589 (72%), Positives = 497/589 (84%), Gaps = 11/589 (1%)
Query: 2 ASQSAN-LWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
+SQS+N LWVLLGLGLAGI ++T+KLK+ +K+D GAFI+KLQLLPPP P PPKAPHPLT
Sbjct: 6 SSQSSNNLWVLLGLGLAGIYVLTRKLKQTVKEDLGAFIQKLQLLPPPPPAPPKAPHPLTS 65
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FA+SDLFDIEG+V+ FGHPEWARTH AS TS VSTLV+ GATCI TV+D +Y I
Sbjct: 66 LTFAISDLFDIEGHVSTFGHPEWARTHEPASSTSPAVSTLVQSGATCIATTVLDNLSYGI 125
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
+G NKH+ TP+NPA P+++PGGSSSGAAVAVAA+ VDFSLG+DT GGVRVP+ FCGILGF
Sbjct: 126 SGENKHFGTPSNPAIPARVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPAGFCGILGF 185
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RPS+GAVSH GIIP+STSLDTVGWFA+DP ILR VGH+LLQ PF QRSPRQIIIADDCF
Sbjct: 186 RPSHGAVSHGGIIPVSTSLDTVGWFAKDPDILRRVGHILLQAPFVMQRSPRQIIIADDCF 245
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--HKTNGELK---- 294
+ L +P DR QVVIK+TEKLFG+QVLKH NL Y SKVPSLK K NGELK
Sbjct: 246 QHLNVPLDRSSQVVIKATEKLFGKQVLKHINLEGYIRSKVPSLKACSGQKANGELKSSSL 305
Query: 295 ----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
N+M+ +QR+EF + H+EW+ VKP L P +SA++ E ++SE +EN KS+R+EMR
Sbjct: 306 ILLANIMQFLQRHEFGHMHDEWMSIVKPDLHPAVSAQLHEKFDVSEVEMENSKSVRSEMR 365
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
A++SLLKD+GILV PT A PPPKLGGKE+LS+DYQ+RAFSLLSIAS+SGCCQVTVPLG+
Sbjct: 366 VAVNSLLKDEGILVIPTVADPPPKLGGKEILSQDYQSRAFSLLSIASISGCCQVTVPLGF 425
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
YDK P SVS IAR+GGDRFLLDT++ MY SLQEQADIA SK S N +++QSAEIAKEK
Sbjct: 426 YDKYPVSVSLIARYGGDRFLLDTLKTMYTSLQEQADIAATSKASRNVVSKEQSAEIAKEK 485
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQAYKDKQW KAI FYTEAIKL GNNATYYSNRA AYLE GS+LQAEADCTKAI+LDKK
Sbjct: 486 GNQAYKDKQWQKAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEADCTKAISLDKK 545
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
+VKAY RRGTAREMLGYYKEAI+DF YALVLEPTNKRA+ +A+RLRK+F
Sbjct: 546 SVKAYFRRGTAREMLGYYKEAIDDFKYALVLEPTNKRAASAAERLRKLF 594
>gi|449439139|ref|XP_004137345.1| PREDICTED: LOW QUALITY PROTEIN: translocon at the outer membrane of
chloroplasts 64-like [Cucumis sativus]
Length = 585
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/589 (73%), Positives = 499/589 (84%), Gaps = 16/589 (2%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MAS SANLWVLLGLGLAGILLMTKKLKK I++DFGAFIEK QLLPPPQP PPKAPHPLTG
Sbjct: 1 MASNSANLWVLLGLGLAGILLMTKKLKKAIREDFGAFIEKFQLLPPPQPAPPKAPHPLTG 60
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FAVSD+F+IEG+VTGFGHP+WA+TH AA S LVEGGATCIGKTV +E + I
Sbjct: 61 LTFAVSDVFEIEGHVTGFGHPDWAKTHDAAX------SALVEGGATCIGKTVTNELSMGI 114
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
+G NKHY+TPTNPA+ S++PGGSSSGAAVAVAA+LVDFSLGIDTVG VR+P++FCGILGF
Sbjct: 115 SGENKHYETPTNPASHSKVPGGSSSGAAVAVAANLVDFSLGIDTVGDVRIPASFCGILGF 174
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RPS+G+VS +GI+P+S SLDTVG FA+DP +LR VGHVLLQLP+A QR+PRQIIIADDCF
Sbjct: 175 RPSHGSVSQVGIVPVSLSLDTVGMFAKDPNVLRRVGHVLLQLPYAVQRNPRQIIIADDCF 234
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--HKTNGELK---- 294
+LLKIP DR+ Q V KSTEKLFGRQ LKHENLG Y SKVP+LK KTNG L
Sbjct: 235 QLLKIPVDRITQAVTKSTEKLFGRQALKHENLGSYLSSKVPNLKELIGKKTNGNLNSASI 294
Query: 295 ----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
N+M+ ++R EFK NH EWI+SVKP LD + ++ E LEIS+T+IE KS+RNEMR
Sbjct: 295 RVLANLMQTVERIEFKGNHGEWIDSVKPDLDSALMEQLNEKLEISDTMIEKFKSVRNEMR 354
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
AI+SLLKDDG+LV PTT PPKLGGKE+ SE+YQ R FS LSIAS+SGCCQVT+PLG+
Sbjct: 355 MAINSLLKDDGVLVIPTTVDSPPKLGGKEIFSEEYQTRVFSSLSIASISGCCQVTLPLGF 414
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
+D CP SVSF+ARHG DRFLLD VQ MY SLQE+A+ A+KSK S N +Q+QSAEIAKEK
Sbjct: 415 HDSCPVSVSFLARHGADRFLLDIVQTMYRSLQEEAEAASKSKFSKNAVSQEQSAEIAKEK 474
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQAYK+KQW KAI YTEAIKLN NATYYSNRAAAYLE G F QAEADC+KAI+LDKK
Sbjct: 475 GNQAYKEKQWEKAIGCYTEAIKLNSRNATYYSNRAAAYLELGRFHQAEADCSKAIDLDKK 534
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
NVK+YLRRGTAREMLG+YKEAIEDFS+ALVLEPTNKRAS+SA+RLRK+F
Sbjct: 535 NVKSYLRRGTAREMLGFYKEAIEDFSHALVLEPTNKRASISAERLRKLF 583
>gi|356512970|ref|XP_003525187.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 587
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/568 (70%), Positives = 480/568 (84%), Gaps = 10/568 (1%)
Query: 22 MTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHP 81
+T+KL K++++DFGAFI KLQLLPPPQP PPKAPHPLT L+FA+SDLF I G+V FGHP
Sbjct: 19 ITRKLNKSVREDFGAFIHKLQLLPPPQPSPPKAPHPLTSLTFALSDLFHIHGHVPSFGHP 78
Query: 82 EWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPG 141
+WARTH +S T+ VS LVEGGATC+ TV+D+ A I G NKH+ TPTNPA P+++PG
Sbjct: 79 DWARTHEPSSSTAPAVSALVEGGATCVATTVLDDLALGIGGENKHFGTPTNPAVPARVPG 138
Query: 142 GSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDT 201
GSSSGAAVAVAA+ VDF+LGIDT GGVRVP+ FCGILGFRPS+GAVSHMGIIPISTSLDT
Sbjct: 139 GSSSGAAVAVAANFVDFALGIDTTGGVRVPAGFCGILGFRPSHGAVSHMGIIPISTSLDT 198
Query: 202 VGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKL 261
VGWFA+DP ILR VGH+LLQ PF QRSPRQI+IADDCF+ + +P DR QVV+K+TEKL
Sbjct: 199 VGWFAKDPNILRRVGHILLQAPFVMQRSPRQIVIADDCFQHINVPLDRSSQVVVKATEKL 258
Query: 262 FGRQVLKHENLGEYFDSKVPSLKGF--HKTNGELK--------NVMRLIQRYEFKNNHNE 311
FGRQVLKH NLG+Y S+VPSLKG K NGE+K ++M+ +QR+EF+ H++
Sbjct: 259 FGRQVLKHINLGDYLSSRVPSLKGCSGQKPNGEVKASSLKLLAHIMQFLQRHEFRLKHDD 318
Query: 312 WIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYP 371
W+ +VKP L P +SA++ E E+S+ IEN KS+R+EMR+A++SLLKD+GILV PT A P
Sbjct: 319 WMNTVKPDLHPGVSAQLHEKFEVSDAEIENSKSVRSEMRAAVNSLLKDEGILVIPTVADP 378
Query: 372 PPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
PPKLGGKE+LSEDYQ+RAFSLLSIAS+SGCCQV++PLG+YDK P SVS IARHGGDRFLL
Sbjct: 379 PPKLGGKEILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSVSLIARHGGDRFLL 438
Query: 432 DTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAI 491
DT+Q +Y +LQEQADIA+KSK S N +++QSAEIAKEKGNQAYKDKQW KAI FYTEAI
Sbjct: 439 DTLQTVYTTLQEQADIASKSKSSGNVVSKEQSAEIAKEKGNQAYKDKQWQKAIGFYTEAI 498
Query: 492 KLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEA 551
KL G+NATYYSNRA AYLE S+LQA DCTKAI+LDKKNVKAY RRGTAR+MLGYYKEA
Sbjct: 499 KLCGDNATYYSNRAQAYLELESYLQAVEDCTKAISLDKKNVKAYFRRGTARQMLGYYKEA 558
Query: 552 IEDFSYALVLEPTNKRASLSADRLRKVF 579
I+DF +ALVLEPTNKRA+ +A+RLRK+F
Sbjct: 559 IDDFKHALVLEPTNKRAASAAERLRKLF 586
>gi|356524688|ref|XP_003530960.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 591
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/568 (72%), Positives = 486/568 (85%), Gaps = 10/568 (1%)
Query: 22 MTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHP 81
+T+KLKK++++D GAFIEKLQLLPPPQP PPKAPHPLT L+FA+SDLFDIEG+V+ FGHP
Sbjct: 23 ITRKLKKSVRKDLGAFIEKLQLLPPPQPAPPKAPHPLTALTFALSDLFDIEGHVSTFGHP 82
Query: 82 EWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPG 141
EWARTH AS T+ VS LVEGGATC+ TV+D+ A I G NKHY TPTNPA P+++PG
Sbjct: 83 EWARTHEPASSTAPAVSALVEGGATCVATTVLDDLALGIGGENKHYGTPTNPAVPARVPG 142
Query: 142 GSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDT 201
GSSSGAAVAVAAD VDF+LGIDTVGGVRVP+ FCGILGFRPS+GAVSH+GIIPISTSLDT
Sbjct: 143 GSSSGAAVAVAADFVDFALGIDTVGGVRVPAGFCGILGFRPSHGAVSHLGIIPISTSLDT 202
Query: 202 VGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKL 261
VGWFA+DP ILR VGH+LLQ PFA QRSPRQI+IADDCF+ + +P DR QVV+K+TEKL
Sbjct: 203 VGWFAKDPNILRRVGHILLQAPFAMQRSPRQIVIADDCFQHINVPLDRSSQVVVKTTEKL 262
Query: 262 FGRQVLKHENLGEYFDSKVPSLKGF--HKTNGELK--------NVMRLIQRYEFKNNHNE 311
FGRQVLKH NLG+Y S+VPSLKG KTNGE+K N+M+ +QR+EF+ H+E
Sbjct: 263 FGRQVLKHINLGDYLSSRVPSLKGCSGQKTNGEVKASALKLLANIMQSLQRHEFRLKHDE 322
Query: 312 WIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYP 371
W+ +VKP L P +SA++ E E+S+ IEN KS+R+EM +A++SLLKD+GILV PT A P
Sbjct: 323 WMNTVKPELHPGVSAQLHEKFEVSDAEIENSKSVRSEMCAAVNSLLKDEGILVIPTVADP 382
Query: 372 PPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
PPKLGGKE+LSEDYQ+RAFSLLSIAS+SGCCQV++PLG+YDK P SVS IARHGGDRFLL
Sbjct: 383 PPKLGGKEILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSVSLIARHGGDRFLL 442
Query: 432 DTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAI 491
DT+Q +Y +LQEQADIA+KSK S N +++QSAEIAKEKGNQAYKDKQW KAI FYTEAI
Sbjct: 443 DTLQTVYTTLQEQADIASKSKSSGNAVSKEQSAEIAKEKGNQAYKDKQWQKAIGFYTEAI 502
Query: 492 KLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEA 551
KL G+NATYYSNRA AYL GS+LQA DCTKAI+LDKKNVKAY RRGTAREMLGYYKEA
Sbjct: 503 KLCGDNATYYSNRAQAYLGLGSYLQAVEDCTKAISLDKKNVKAYFRRGTAREMLGYYKEA 562
Query: 552 IEDFSYALVLEPTNKRASLSADRLRKVF 579
I+DF +ALVLEPTNKRA+ +A+RLRK+F
Sbjct: 563 IDDFKHALVLEPTNKRAASAAERLRKLF 590
>gi|75336680|sp|Q9MUK5.1|TOC64_PEA RecName: Full=Translocon at the outer membrane of chloroplasts 64
gi|7453538|gb|AAF62870.1|AF179282_1 Toc64 [Pisum sativum]
Length = 593
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/589 (70%), Positives = 491/589 (83%), Gaps = 10/589 (1%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MAS S+ +WV+LGLGLAGI ++T+KL + +K+DFGAF+ KL+LLPPP P PPKAPHPL+
Sbjct: 4 MASPSSQIWVILGLGLAGIYVLTRKLTQAVKEDFGAFLLKLKLLPPPPPAPPKAPHPLSS 63
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FA+SD+FDIEG+V+ FGHPEWARTH AS T++ VS LVE GATCIG TVVDE AY I
Sbjct: 64 LNFAISDIFDIEGHVSTFGHPEWARTHEPASSTASAVSALVESGATCIGTTVVDELAYGI 123
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
+G NKH+ TPTNPA P+++PGGSSSGAAVAVAA+ VDFSLG+DT GGVRVP+ FCGILGF
Sbjct: 124 SGENKHFGTPTNPAVPNRVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPAGFCGILGF 183
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RPS+GAVSH+GIIP+STSLDTVGWFA+DP +LR VGH+LLQ PF QR+PRQIIIADDCF
Sbjct: 184 RPSHGAVSHVGIIPVSTSLDTVGWFAKDPDVLRRVGHILLQAPFVMQRNPRQIIIADDCF 243
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG--FHKTNGELK---- 294
+ L +P DR QVVIK+TEKLFG+QVLKH N +Y SKV SLK K+NG LK
Sbjct: 244 QHLNVPLDRTSQVVIKATEKLFGKQVLKHINFEDYISSKVSSLKACSIQKSNGVLKSSSL 303
Query: 295 ----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
NVM+ +QR+EF++ H+EW+ VKP L P +SA++ E E+SE IEN KS+R+E+R
Sbjct: 304 KLLANVMQSLQRHEFEHTHSEWMSIVKPDLHPAVSAQLHEKFEVSELEIENSKSVRSELR 363
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
A++SLLKD+G+LV PT A PPPKLGGKE LS DYQ+RA SLLSIAS+SGCCQVTVPLG+
Sbjct: 364 VAVNSLLKDEGVLVIPTVADPPPKLGGKEFLSHDYQSRALSLLSIASISGCCQVTVPLGF 423
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
+DK P SVS IARHGGDRFLLDT++ MY LQEQADIA SK S + +++QSAEI+KEK
Sbjct: 424 FDKNPVSVSLIARHGGDRFLLDTLKTMYTVLQEQADIAAPSKSSKSVVSKEQSAEISKEK 483
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQAYKDKQW KAI FYTEAIKL GNNATYYSNRA AYLE GS+LQAE DCT AI+ DKK
Sbjct: 484 GNQAYKDKQWQKAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEEDCTTAISFDKK 543
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
NVKAY RRGTAREMLGYYKEAI+DF YALVLEPTNKRA+ SA+RLRK+F
Sbjct: 544 NVKAYFRRGTAREMLGYYKEAIDDFKYALVLEPTNKRAASSAERLRKLF 592
>gi|30684733|ref|NP_188424.2| translocon at the outer membrane of chloroplasts 64-III
[Arabidopsis thaliana]
gi|75335547|sp|Q9LVH5.1|OE64C_ARATH RecName: Full=Outer envelope protein 64, chloroplastic; AltName:
Full=Translocon at the outer membrane of chloroplasts
64-III
gi|9294499|dbj|BAB02718.1| unnamed protein product [Arabidopsis thaliana]
gi|332642509|gb|AEE76030.1| translocon at the outer membrane of chloroplasts 64-III
[Arabidopsis thaliana]
Length = 589
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/587 (72%), Positives = 491/587 (83%), Gaps = 10/587 (1%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MASQ+ANLWVLLGLGLAGIL++TKKLKK +++DFGAFI+KL LLPPPQP PPKAPHPLTG
Sbjct: 1 MASQAANLWVLLGLGLAGILMLTKKLKKTVREDFGAFIDKLMLLPPPQPAPPKAPHPLTG 60
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FAVSD+FDI GYVTGFGHP+W RTH AAS TS VVSTLVEGGATC+GKTVVDEFA+SI
Sbjct: 61 LTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFSI 120
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
+G NKHYD+PTNPAAP+++PGG+ SGAAVAVA + VDF+LGIDTVGGVRVP+ +CG+LGF
Sbjct: 121 SGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVLGF 180
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+ SYGA+S+ GIIP+S+SLD+VGWFARDP LR VGHVLLQLPFA QR+PRQII+ADDCF
Sbjct: 181 KSSYGAISNTGIIPVSSSLDSVGWFARDPNTLRRVGHVLLQLPFATQRNPRQIILADDCF 240
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG--------- 291
+LLKIP DR+ QVV KS EKLFGRQ+LKH+NL YF++KVPSLK F +T
Sbjct: 241 QLLKIPVDRITQVVTKSAEKLFGRQLLKHQNLETYFETKVPSLKEFARTKAIANTKVSTS 300
Query: 292 -ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
L NVM+L+QR+EF NH +WI +VKPA+DP I +++ E E++ EN +IRNE R
Sbjct: 301 RLLANVMQLLQRHEFLQNHGDWINTVKPAIDPVILSQVCENPELTNEETENLNAIRNETR 360
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
AI SLLKDDGILV PT PPKLG KE+ SEDYQNRA SLLSIAS+SGCCQVTVPLG+
Sbjct: 361 VAIGSLLKDDGILVIPTLPAVPPKLGSKEITSEDYQNRASSLLSIASISGCCQVTVPLGH 420
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
++KCP SVSFI RHGGDRFLLDTVQ MY SLQE + I T K S +++SAEIAKEK
Sbjct: 421 HEKCPISVSFIGRHGGDRFLLDTVQTMYPSLQEYSSIVTDPKSSKKAITKEESAEIAKEK 480
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQA+K+K W KAI Y+EAIKL+ NNATYYSNRAAAYLE G FLQAE DCTKAI LDKK
Sbjct: 481 GNQAFKEKLWQKAIGLYSEAIKLSDNNATYYSNRAAAYLELGGFLQAEEDCTKAITLDKK 540
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
NVKAYLRRGTAREMLG K AIEDF YALVLEP NKRASLSA+RLRK
Sbjct: 541 NVKAYLRRGTAREMLGDCKGAIEDFRYALVLEPNNKRASLSAERLRK 587
>gi|115454865|ref|NP_001051033.1| Os03g0707900 [Oryza sativa Japonica Group]
gi|13937285|gb|AAK50116.1|AC087797_1 chloroplast protein-translocon-like protein [Oryza sativa Japonica
Group]
gi|108710681|gb|ABF98476.1| chloroplast outer membrane translocon subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|108710682|gb|ABF98477.1| chloroplast outer membrane translocon subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|113549504|dbj|BAF12947.1| Os03g0707900 [Oryza sativa Japonica Group]
gi|218193613|gb|EEC76040.1| hypothetical protein OsI_13214 [Oryza sativa Indica Group]
Length = 586
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/586 (60%), Positives = 451/586 (76%), Gaps = 11/586 (1%)
Query: 2 ASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGL 61
+S +ANLWVLLGLG+AG+LL K+L++ + D GAFI +L+LLPPPQP PP+A HPLTGL
Sbjct: 3 SSTAANLWVLLGLGIAGVLLAAKRLRRPARPDNGAFIARLELLPPPQPPPPQARHPLTGL 62
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
FA++D F + GY+T FG EWA+TH AA++TS VVS+LV+GGA C+GKTV+DE A+SI+
Sbjct: 63 CFAIADAFHVTGYITSFGSLEWAKTHDAATQTSLVVSSLVDGGAMCVGKTVIDEMAFSIH 122
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFR 181
G NKH+ TPTNPAAP ++PGG SSG+AVAVAA +VDFSLGIDT+GGVRVP ++CG+L FR
Sbjct: 123 GENKHFGTPTNPAAPDRVPGGCSSGSAVAVAAGIVDFSLGIDTIGGVRVPGSYCGVLAFR 182
Query: 182 PSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFE 241
PS+ V + G+IP++ SLD +GWFARDP +LR VGH+LL+LP+A R PR IADDCFE
Sbjct: 183 PSHAVVPNNGVIPVAPSLDAIGWFARDPSVLRRVGHLLLRLPYADIRQPRHFYIADDCFE 242
Query: 242 LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE--------L 293
+ K+ A R+ QVV KS EKLFGRQVL H NL Y S++PSL+ +G+ L
Sbjct: 243 MSKVHARRLTQVVTKSVEKLFGRQVLGHVNLENYLASRIPSLRNNSNGHGDSKFSSLLAL 302
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
M+ + ++EFK+ H EWI SVKPA+D I +G + + E+ I N + R E+R+A+
Sbjct: 303 SRAMQFLHKHEFKDQHMEWINSVKPAVDACI---VGNLSDDGESTINNSQDARKEVRAAL 359
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+LLKDDGILV PT PPKL +E+ S+DY + L S+AS+SGCCQVTVPLG +DK
Sbjct: 360 GALLKDDGILVIPTVLGCPPKLNARELSSQDYNVQTSCLTSLASMSGCCQVTVPLGTHDK 419
Query: 414 CPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQ 473
CP SVS IARHGGDRFLLDT+Q +YA++QEQ D KS +S+ +++AE AKEKGN
Sbjct: 420 CPVSVSLIARHGGDRFLLDTIQTIYATIQEQVDALAKSNVSSKQAMSEEAAEAAKEKGNI 479
Query: 474 AYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVK 533
A+K+KQW KAI+FYTEAIKLN ATYYSNRAAA+LE S+ QAEADCT AI++D K VK
Sbjct: 480 AFKEKQWQKAINFYTEAIKLNNKVATYYSNRAAAFLELASYRQAEADCTSAIDIDPKIVK 539
Query: 534 AYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
AYLRRGTAREMLGYYKEA++DFS+ALVLEP NK A ++ +RL+K+F
Sbjct: 540 AYLRRGTAREMLGYYKEAVDDFSHALVLEPMNKTAGVAINRLKKLF 585
>gi|222625649|gb|EEE59781.1| hypothetical protein OsJ_12287 [Oryza sativa Japonica Group]
Length = 586
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/586 (60%), Positives = 451/586 (76%), Gaps = 11/586 (1%)
Query: 2 ASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGL 61
+S +ANLWVLLGLG+AG+LL K+L++ + + GAFI +L+LLPPPQP PP+A +PLTGL
Sbjct: 3 SSTAANLWVLLGLGIAGVLLAAKRLRRPARPENGAFIARLELLPPPQPPPPQARNPLTGL 62
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
FA++D F + GY+T FG EWA+TH AA++TS VVS+LV+GGA C+GKTV+DE A+SI+
Sbjct: 63 CFAIADAFHVTGYITSFGSLEWAKTHDAATQTSLVVSSLVDGGAMCVGKTVIDEMAFSIH 122
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFR 181
G NKH+ TPTNPAAP ++PGG SSG+AVAVAA +VDFSLGIDT+GGVRVP ++CG+L FR
Sbjct: 123 GENKHFGTPTNPAAPDRVPGGCSSGSAVAVAAGIVDFSLGIDTIGGVRVPGSYCGVLAFR 182
Query: 182 PSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFE 241
PS+ V + G+IP++ SLD +GWFARDP +LR VGH+LL+LP+A R PR IADDCFE
Sbjct: 183 PSHAVVPNNGVIPVAPSLDAIGWFARDPSVLRRVGHLLLRLPYADIRQPRHFYIADDCFE 242
Query: 242 LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE--------L 293
+ K+ A R+ QVV KS EKLFGRQVL H NL Y S++PSL+ +G+ L
Sbjct: 243 MSKVHARRLTQVVTKSVEKLFGRQVLGHVNLENYLASRIPSLRNNSNGHGDSKFSSLLAL 302
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
M+ + ++EFK+ H EWI SVKPA+D I +G + + E+ I N + R E+R+A+
Sbjct: 303 SRAMQFLHKHEFKDQHMEWINSVKPAVDACI---VGNLSDDGESTINNSQDARKEVRAAL 359
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+LLKDDGILV PT PPKL +E+ S+DY + L S+AS+SGCCQVTVPLG +DK
Sbjct: 360 GALLKDDGILVIPTVLGCPPKLNARELSSQDYNVQTSCLTSLASMSGCCQVTVPLGTHDK 419
Query: 414 CPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQ 473
CP SVS IARHGGDRFLLDT+Q +YA++QEQ D KS +S+ +++AE AKEKGN
Sbjct: 420 CPVSVSLIARHGGDRFLLDTIQTIYATIQEQVDALAKSNVSSKQAMSEEAAEAAKEKGNI 479
Query: 474 AYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVK 533
A+K+KQW KAI+FYTEAIKLN ATYYSNRAAA+LE S+ QAEADCT AI++D K VK
Sbjct: 480 AFKEKQWQKAINFYTEAIKLNNKVATYYSNRAAAFLELASYRQAEADCTSAIDIDPKIVK 539
Query: 534 AYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
AYLRRGTAREMLGYYKEA++DFS+ALVLEP NK A ++ +RL+K+F
Sbjct: 540 AYLRRGTAREMLGYYKEAVDDFSHALVLEPMNKTAGVAINRLKKLF 585
>gi|326531444|dbj|BAJ97726.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 588
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/588 (58%), Positives = 447/588 (76%), Gaps = 13/588 (2%)
Query: 2 ASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGL 61
+S +ANLWVLLGLG+AG+LL K+LK+ + D GAF+ +L+LLPPPQP PP+A HPLT L
Sbjct: 3 SSTAANLWVLLGLGIAGVLLAAKRLKRPARPDHGAFVSRLELLPPPQPPPPQARHPLTDL 62
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
FA++D F + GY+T FG EWA+TH A++TS VVSTLV+GGA C+GKTV+DE AYSI+
Sbjct: 63 CFAIADAFHVSGYITSFGSLEWAKTHDEATQTSLVVSTLVDGGAICVGKTVIDEMAYSIH 122
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFR 181
G NKH+ TPTNPAA ++PGG SSG+AVAVA +VDF+LGID++GGVRVP +CG+L FR
Sbjct: 123 GENKHFGTPTNPAASDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRVPGGYCGVLAFR 182
Query: 182 PSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFE 241
PS+ +S+ G+IP++ SLDT+GWFARDP +LR VGH+LL+L + R PR IADDCFE
Sbjct: 183 PSHAVISNSGVIPVAPSLDTIGWFARDPIVLRRVGHLLLKLSYTDIRLPRHFYIADDCFE 242
Query: 242 LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH--KTNGE------- 292
+ KIPA R+ QVV KS EKL+GRQVL H NLG Y SK+PSL+ + + NG+
Sbjct: 243 ISKIPARRLTQVVTKSVEKLYGRQVLSHVNLGNYLASKIPSLRNYSNGQKNGDSKFSSLQ 302
Query: 293 -LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
L + M+L+ ++EF++ HNEWI S K ++D I +G + + ++ I + +R E+R
Sbjct: 303 ALSSAMQLLHKHEFRDQHNEWINSAKSSVDASI---VGNLSDDGDSTINIIQDVRKEVRL 359
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
A+++LLKDDGILV PT PPK+ +E+ S Y L S++S+SGCCQVTVP+G +
Sbjct: 360 ALNTLLKDDGILVIPTALGCPPKINARELSSTSYNAETLYLQSLSSMSGCCQVTVPIGTH 419
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKG 471
DKCP SVSFIARHGGDRFLLDT Q +YA++QEQ +I KS S+ +++AE AKEKG
Sbjct: 420 DKCPISVSFIARHGGDRFLLDTTQAIYATIQEQVEILAKSNASSKEAMNEEAAEAAKEKG 479
Query: 472 NQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKN 531
N A+K+KQW KAI+ YTEAIKLNG ATYYSNRAAA+LE ++ QAE DCT AI++D K
Sbjct: 480 NSAFKEKQWQKAINLYTEAIKLNGKVATYYSNRAAAFLELANYRQAETDCTSAIDIDPKI 539
Query: 532 VKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
VKAYLRRGTAREMLGYYKEA++DFS+ALVLEP NK A ++ +RL+K+F
Sbjct: 540 VKAYLRRGTAREMLGYYKEAVDDFSHALVLEPMNKTAGVAINRLKKLF 587
>gi|226493135|ref|NP_001152345.1| LOC100285985 [Zea mays]
gi|195655363|gb|ACG47149.1| toc64 [Zea mays]
Length = 588
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/592 (60%), Positives = 455/592 (76%), Gaps = 18/592 (3%)
Query: 1 MASQ--SANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
MAS +ANLWVLLGLG+AG+LL ++L++ + D GAF+ +L+LLPPPQP PP+APHPL
Sbjct: 1 MASSGAAANLWVLLGLGIAGVLLAARRLRRPARPDHGAFVARLELLPPPQPPPPQAPHPL 60
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
TGL FA++D + GY+T FG EWA+TH+A TS+VVS LV+GGA C+GKTV+DE AY
Sbjct: 61 TGLCFAIADALHVSGYITSFGSLEWAKTHNAEVLTSSVVSALVDGGAICVGKTVIDEMAY 120
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
SI+G N+++DTPTNPAAP ++PGG SSG+AVAVA +VDF+LGID++GGVR+P A+CG+L
Sbjct: 121 SIHGENRYFDTPTNPAAPDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRIPGAYCGVL 180
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
FRPS+ VS+ G+IP++ SLDT+GWFA+DP +L VGH+LL+LP+A R PR IADD
Sbjct: 181 AFRPSHAVVSNSGVIPVAPSLDTIGWFAKDPSVLHRVGHLLLRLPYAGIRQPRIFYIADD 240
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF---HKTNGE--- 292
CFEL KIPA R+ QVV KS EKLFGRQV +H NL Y S++ SL + HK NG+
Sbjct: 241 CFELSKIPARRLTQVVTKSVEKLFGRQV-RHVNLENYLSSRISSLGNYSNGHK-NGDSKF 298
Query: 293 -----LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
L N M + + EFK+ H EWI SVKPA+D I + ++ E ++ I+ C+++R
Sbjct: 299 PLLLALCNSMISLHKQEFKDKHMEWINSVKPAVDARI---VSDLSEDGDSDIDGCQNVRK 355
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVP 407
E RSA+S LLKDDGILV PT PPKL KE+ SE Y ++ LLS+AS+SGCCQV++P
Sbjct: 356 EARSALSGLLKDDGILVIPTALGCPPKLNAKELSSESYNSQTLRLLSLASMSGCCQVSIP 415
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIA 467
LG +DKCP SVS IARHGGDRFLLDT Q MY ++QEQ +I KS +S+ +++AE A
Sbjct: 416 LGTHDKCPISVSLIARHGGDRFLLDTTQTMYTTIQEQVEILAKSSVSSKQAMNEEAAEAA 475
Query: 468 KEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINL 527
KEKGN A+K+KQW KA++FYTEAIKLNG ATYYSNRAAA+LE S+ QAEADCT AI L
Sbjct: 476 KEKGNAAFKEKQWQKAVNFYTEAIKLNGKVATYYSNRAAAFLELTSYRQAEADCTSAIEL 535
Query: 528 DKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
D K+VKAYLRRGTAREMLGYYKEA++DF++ALVLEP NK A ++ +RL+K+F
Sbjct: 536 DSKSVKAYLRRGTAREMLGYYKEAVDDFNHALVLEPMNKTAGVAINRLKKLF 587
>gi|242033249|ref|XP_002464019.1| hypothetical protein SORBIDRAFT_01g010650 [Sorghum bicolor]
gi|241917873|gb|EER91017.1| hypothetical protein SORBIDRAFT_01g010650 [Sorghum bicolor]
Length = 588
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/592 (59%), Positives = 447/592 (75%), Gaps = 18/592 (3%)
Query: 1 MASQ--SANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
MAS +ANLWVLLGLG+AG+ L ++L++ + D GAFI +L+LLPPPQP PP+APHPL
Sbjct: 1 MASSGAAANLWVLLGLGIAGVFLAARRLRRPARPDHGAFIARLELLPPPQPPPPQAPHPL 60
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
TGL FA++D + GY+T FG EWA+TH A +TS VVS LV+ GA C+GKTV+DE AY
Sbjct: 61 TGLCFAIADALHVSGYITSFGSLEWAKTHDAEVQTSPVVSALVDSGAICVGKTVIDEMAY 120
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
SI+G NK++DTPTNPA P ++PGG SSG+AVAVA +VDF+LGID++GGVRVP A+CG+L
Sbjct: 121 SIHGENKYFDTPTNPATPDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRVPGAYCGVL 180
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
FRPS+ VS G+IP++ SLDT+GWFARDP +L VGH+LL+LP+A R PR IADD
Sbjct: 181 AFRPSHAVVSSSGVIPVAPSLDTIGWFARDPSVLHRVGHLLLRLPYAGIRQPRNFYIADD 240
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF---HKTNGELK- 294
CF L KIP R+ QVV KS EKLFGRQV +H NL Y S++ L + HK NG+ K
Sbjct: 241 CFGLSKIPVRRLTQVVTKSVEKLFGRQV-RHVNLENYLSSRISGLSNYSNGHK-NGDSKF 298
Query: 295 -------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
N MR + + EFK+ H EWI SVKPA+D I + ++ E ++ I+ C+ R
Sbjct: 299 PLLLALCNAMRSLHKREFKDQHMEWINSVKPAVDARI---VSDLSEDGDSDIDGCQDARK 355
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVP 407
E RSA+S LLKDDGILV PT PPKL KE+ SE Y ++ LLS+AS+SGCCQV++P
Sbjct: 356 EARSALSELLKDDGILVIPTALGCPPKLNAKELSSESYNSQTLGLLSLASMSGCCQVSIP 415
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIA 467
LG +DKCP SVS IARHGGDRFLLDT Q MY ++QEQ +I KS +S+ +++AE A
Sbjct: 416 LGTHDKCPISVSLIARHGGDRFLLDTTQTMYTTIQEQVEILAKSSVSSKQAMNEEAAEAA 475
Query: 468 KEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINL 527
KEKGN A+K+KQW KA++FYTEAIKLNG ATYYSNRAAA+LE S+ QAEADCT AI+L
Sbjct: 476 KEKGNAAFKEKQWQKAVNFYTEAIKLNGKVATYYSNRAAAFLELTSYRQAEADCTSAIDL 535
Query: 528 DKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
D K+VKAYLRRGTAREMLGYYK+A++DF++ALVLEP NK A ++ +RL+K+F
Sbjct: 536 DPKSVKAYLRRGTAREMLGYYKDAVDDFNHALVLEPMNKTAGVAINRLKKLF 587
>gi|357117973|ref|XP_003560735.1| PREDICTED: uncharacterized protein LOC100846161 [Brachypodium
distachyon]
Length = 588
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/588 (59%), Positives = 445/588 (75%), Gaps = 13/588 (2%)
Query: 2 ASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGL 61
+S +ANLWVLLGLG+AG+LL K+L++ + D GAFI +L+LLPPPQP PP+A HPLT L
Sbjct: 3 SSTAANLWVLLGLGIAGVLLAAKRLRRPARPDSGAFISRLELLPPPQPPPPQARHPLTDL 62
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
FAV+D F I Y+T FG EWA+TH AA++TS VVS+LV+GGA C+GKTV+DE AYSI+
Sbjct: 63 CFAVADAFHISSYITSFGSLEWAKTHDAATQTSLVVSSLVDGGAICVGKTVIDEMAYSIH 122
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFR 181
G NKH+ TP NPAA ++PGG SSG+AVAVAA +VDF+LGID+VGGVRVP +CG+L FR
Sbjct: 123 GENKHFGTPRNPAASDRVPGGCSSGSAVAVAAGMVDFALGIDSVGGVRVPGGYCGVLAFR 182
Query: 182 PSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFE 241
PS+ + + G+IP++ SLDT+GWFARDP +LR VGH+LL+L + R PR IADDCFE
Sbjct: 183 PSHAVIPNSGVIPVAPSLDTIGWFARDPIVLRRVGHLLLRLSYTEIRLPRNFYIADDCFE 242
Query: 242 LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH--KTNGE------- 292
L KIPA R+ QVV KS EKL+GRQVL H NLG Y S++PSL+ + + NG+
Sbjct: 243 LSKIPARRLTQVVTKSAEKLYGRQVLSHVNLGNYLASRMPSLRNYSNGQKNGDSKSCSLL 302
Query: 293 -LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
L + M+L+ ++EF++ HNEWI SVK A+D I +G + + + I+ C+ +R E RS
Sbjct: 303 ALSSAMQLLHKHEFRDQHNEWINSVKSAVDACI---VGNLSDNGASTIDLCQDVRKEARS 359
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
A+++LLKDDGILV PT PPK+ +E+ S Y L S++S+SGCCQVT+P+G +
Sbjct: 360 ALNALLKDDGILVIPTALGCPPKVNSRELSSASYNAETLCLSSLSSMSGCCQVTIPVGTH 419
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKG 471
DKCP SVSFIARHGGDRFLLDT Q MY ++QEQ +I S S+ +++AE AKEKG
Sbjct: 420 DKCPISVSFIARHGGDRFLLDTTQAMYGTIQEQVEILATSNASSKQAMIEEAAEAAKEKG 479
Query: 472 NQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKN 531
N A+K+KQW KAI+ YTEAIKLN ATYYSNRAAA+LE S+ QAE DCT AI++D K
Sbjct: 480 NIAFKEKQWQKAINLYTEAIKLNDKVATYYSNRAAAFLELASYRQAETDCTSAIDIDPKI 539
Query: 532 VKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
VKAYLRRGTAREMLGYYKEA++DFS+ALVLEP NK A ++ +RL+K+F
Sbjct: 540 VKAYLRRGTAREMLGYYKEAVDDFSHALVLEPMNKTAGIAINRLKKLF 587
>gi|44662989|gb|AAS47585.1| chloroplast Toc64-2 [Physcomitrella patens]
Length = 585
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/583 (56%), Positives = 433/583 (74%), Gaps = 16/583 (2%)
Query: 7 NLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVS 66
++ VLLGLG+AG ++ + LK + K+D GAFI +LLPPP P PP AP PL+GL+FAV
Sbjct: 10 SIGVLLGLGIAGFFILRRTLKSSSKKDNGAFIYYFELLPPPPPPPPSAPLPLSGLTFAVK 69
Query: 67 DLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKH 126
D+FD+EG++TGFG+P WA TH A+ T+ V LVE GA C+GK +DE AYSING NKH
Sbjct: 70 DIFDVEGFITGFGNPVWAETHEPATVTAPAVKVLVEAGAKCVGKLHMDELAYSINGENKH 129
Query: 127 YDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGA 186
Y TP NPAAP+++PGGSSSG+AVAVAA+ VDFSLG DT G VRVP+AFCGILGFRPS+GA
Sbjct: 130 YGTPVNPAAPNRIPGGSSSGSAVAVAANCVDFSLGTDTGGSVRVPAAFCGILGFRPSHGA 189
Query: 187 VSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIP 246
+S G++P++ S DTVGWFA+DPK LR VGH LLQLP++ + PR+++IADDCF+L IP
Sbjct: 190 ISVSGVLPMAQSFDTVGWFAKDPKTLRQVGHALLQLPYSDSKQPRRVLIADDCFKLSLIP 249
Query: 247 ADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHK--TNGE-------LKNVM 297
+ VV VI+S +KL GRQVL++ NLG++ VPSLK K +NG L+ M
Sbjct: 250 NEDVVGAVIRSVQKLLGRQVLQYINLGDFIRRNVPSLKELEKEISNGSPIGALTLLRTAM 309
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
+L+QR+EFK NH EW+E+ KP L DI+A + L++ + + IRNE R AI+ LL
Sbjct: 310 QLLQRWEFKENHQEWLENAKPDLSSDIAARVQAALDMKGDQVSLVQQIRNEARFAINDLL 369
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
K+D ILV PT PPKLG K ++++ RAF LLS++ +SGCCQV+VP+G Y+ PT+
Sbjct: 370 KNDTILVMPTVPDIPPKLGIKADFPDEFRARAFDLLSVSGMSGCCQVSVPVGEYNNVPTA 429
Query: 418 VSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKD 477
VS +A+ G DRFLLDTV Y ++QE+A K +++ F+ ++AE+AKEKGN ++K+
Sbjct: 430 VSLLAKRGSDRFLLDTVLTAYPTIQEEA------KGASDRFS-AEAAEMAKEKGNASFKE 482
Query: 478 KQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLR 537
K + KAIS YT+AI+++ NNAT+Y+NRA AYL+ SF +AEADCTKA+ LDKK+VKAYLR
Sbjct: 483 KDYKKAISHYTDAIRMDENNATFYNNRAMAYLQLCSFQEAEADCTKALGLDKKSVKAYLR 542
Query: 538 RGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVFM 580
RGTARE LGYYKEA +DF A +LEPTNK AS + RL+K+ +
Sbjct: 543 RGTAREFLGYYKEANDDFRQAQILEPTNKTASEALARLKKLLI 585
>gi|225448253|ref|XP_002268888.1| PREDICTED: outer envelope protein 64, mitochondrial [Vitis
vinifera]
gi|296086830|emb|CBI32979.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/587 (54%), Positives = 418/587 (71%), Gaps = 16/587 (2%)
Query: 9 WVLLGLGLAGILLMTKKLKKN------IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLS 62
W+++ G+AGI+++ + ++ ++ GAF+E+ +LLP PQP PP + L+G
Sbjct: 20 WIVIAAGVAGIVILVETRRRKRRAALLTREGLGAFVERFELLPFPQPPPPASRLLLSGFK 79
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
FAV+D+FD++GYVTGFG W RTH A++T+ V+ L++ GATC+GKTV+DE ++ I G
Sbjct: 80 FAVTDIFDVKGYVTGFGSTSWKRTHEEATKTAVAVTALLKNGATCVGKTVLDELSFGITG 139
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N + +P NP PS +PGGSSSG+AVAVA+ LVDF++G DT+GGVRVP++FCGILG+RP
Sbjct: 140 ENMDFGSPANPVLPSHIPGGSSSGSAVAVASQLVDFAIGTDTIGGVRVPASFCGILGYRP 199
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+GAVS +G++P S SLDTVGWFARDP IL VGH+LLQ+ R R ++IADD F+L
Sbjct: 200 SHGAVSTIGVLPSSQSLDTVGWFARDPSILHRVGHILLQINPVEPRRVRNLMIADDLFQL 259
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN------- 295
K+P + V VV K E L G Q KH N G+Y S VPSLKGFH+ + +KN
Sbjct: 260 SKVPKQKTVHVVNKVAENLSGYQPPKHVNFGQYIASNVPSLKGFHEQSINVKNGISALKA 319
Query: 296 ---VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
VM +QR EFK NH EW++SVKP L P++S + + + I+ +R EMR+A
Sbjct: 320 LSSVMISLQRCEFKTNHEEWVKSVKPRLGPEVSDRVLAAINTTHENIKIFYKVRTEMRAA 379
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
+ SLLKDDGILV PT A PP KL K+ + ++ +RAF+LLSIAS+SGCCQVTVPLG ++
Sbjct: 380 LHSLLKDDGILVIPTVADPPLKLNSKKAVFSEFHDRAFTLLSIASMSGCCQVTVPLGKHE 439
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGN 472
P SVSFIA HG D+FLLDTV +MY SLQEQA I + S +T ++E+ KEKGN
Sbjct: 440 DFPISVSFIAFHGADKFLLDTVLDMYPSLQEQASITSNSLPLPDTNGDMDASELLKEKGN 499
Query: 473 QAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNV 532
A+K +QW KA+++YTEAIKLN NATYY NRAAAYLE G F QA DC+KAI LDKKNV
Sbjct: 500 AAFKGRQWNKAVNYYTEAIKLNETNATYYCNRAAAYLELGCFQQAVEDCSKAILLDKKNV 559
Query: 533 KAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
KAYLRRGTARE L YKEA +DF +ALVLEP NK A+L+ RLRK+
Sbjct: 560 KAYLRRGTARESLLCYKEAAQDFKHALVLEPQNKVANLAEKRLRKLM 606
>gi|449438199|ref|XP_004136877.1| PREDICTED: outer envelope protein 64, mitochondrial-like [Cucumis
sativus]
Length = 606
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/589 (53%), Positives = 415/589 (70%), Gaps = 17/589 (2%)
Query: 8 LWVLLGLGLAGILLM--TKKLKKNIK----QDFGAFIEKLQLLPPPQPLPPKAPHPLTGL 61
LW+L+G+G+AG++++ T++ +N K +DFGAFI++ +L P PQP PP A L GL
Sbjct: 17 LWILIGVGVAGVVILAETRRRGRNGKVLQGEDFGAFIQRFELRPFPQPSPPAARQSLAGL 76
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
+FAV D+FD++ YVTGFG+P+W RTH A +T +V+ L++ GA C+GKTV+DE + I
Sbjct: 77 TFAVKDVFDVKDYVTGFGNPDWKRTHDVAEKTDEMVTLLLKNGAACVGKTVMDELGFGIT 136
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFR 181
G NK Y TP NP S +PGGSSSG+AVAVA +LVDF+LG DTVG +R+P++FCGI FR
Sbjct: 137 GENKQYGTPINPKLSSFVPGGSSSGSAVAVAGELVDFALGTDTVGCIRIPASFCGIFAFR 196
Query: 182 PSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFE 241
PS+G + ++ S SLDTVGWFARDP L VGHVLL+L R R+++IADD F+
Sbjct: 197 PSHGVIPMNRVLSNSPSLDTVGWFARDPSTLHRVGHVLLKLNSVEPRRMRRLVIADDLFQ 256
Query: 242 LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK------- 294
L K+P + V VV K+ E L G Q KH N GEY S VPSLKGFH + L+
Sbjct: 257 LSKVPLQKTVHVVEKAIENLSGYQSPKHMNFGEYLASNVPSLKGFHNQSPTLQKGITILK 316
Query: 295 ---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+VM L+QR EFK NH EWI+SVKP L + S ++ ++ S I+ +R E R
Sbjct: 317 ALSSVMILLQRSEFKINHEEWIKSVKPKLGSNASEDVLAAIKTSYDDIKTLYKVRMETRI 376
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
A+ SLLKDDGILV PT A PPPK K+ ++ ++++R F+L SI+S+SGCC+V VPLG
Sbjct: 377 ALKSLLKDDGILVIPTVADPPPKFSTKKGIASEFRDRTFALSSISSMSGCCEVAVPLGKQ 436
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLS-TNTFNQKQSAEIAKEK 470
D CP S+S I HG D+FLLDTV +++++LQEQ +A+ + L +T ++E+ KEK
Sbjct: 437 DDCPISISLITFHGADKFLLDTVLDIFSALQEQVGVASNNLLPFADTNGDMDASELLKEK 496
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GN A+K +QW KA+++YT+AIKLNG NATYY NRAAAYLE G F QAE DC+KAI LDKK
Sbjct: 497 GNAAFKGRQWNKAVNYYTDAIKLNGTNATYYCNRAAAYLELGCFQQAEDDCSKAILLDKK 556
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
VKAYLRRGTARE L YKEAI+DF +ALVLEP NK A+L+ RL+K+
Sbjct: 557 TVKAYLRRGTARESLLLYKEAIKDFKHALVLEPQNKVANLAEKRLQKLI 605
>gi|255569802|ref|XP_002525865.1| amidase, putative [Ricinus communis]
gi|223534870|gb|EEF36559.1| amidase, putative [Ricinus communis]
Length = 607
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 320/590 (54%), Positives = 415/590 (70%), Gaps = 18/590 (3%)
Query: 8 LWVLLGLGLAGILLMTKKLKKNIK--------QDFGAFIEKLQLLPPPQPLPPKAPHPLT 59
+W+++G+ +AGI+++ + +++ K +DFGAFIEK ++LP PQ PP A PL+
Sbjct: 17 VWLVIGVTVAGIIVVAETRRRSRKAALMMIKREDFGAFIEKFEILPFPQAPPPAAKQPLS 76
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
GLSFA+ D+FD++ YVTGFG+P+W RTH A + + V+ L++ GATC+GKT++DE
Sbjct: 77 GLSFAIKDIFDVKDYVTGFGNPDWRRTHEVAEKMAVAVTALLKNGATCVGKTIMDELGLG 136
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
I+G N HY TP NP PS +PGGSSSG+AV VAA+LVDF+LG DT+G +R+P+AFCGI G
Sbjct: 137 ISGENLHYGTPMNPIMPSFVPGGSSSGSAVTVAAELVDFALGTDTIGCIRIPAAFCGIFG 196
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
+RPS+G VS +G IP + SLDTVGW ARDP ILR VGH LL+L R R+II ADD
Sbjct: 197 YRPSHGTVSMIGAIPNAQSLDTVGWLARDPSILRCVGHALLKLNAVEARKARRIIFADDL 256
Query: 240 FELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN---- 295
F+L K+P + V+ K+ E L G Q KH N G+Y S VPSLKGF + +G L++
Sbjct: 257 FQLCKVPKQKTEYVISKAIENLSGYQSPKHLNFGQYIASNVPSLKGFLEQSGNLQSGTSA 316
Query: 296 ------VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
VM +QRYEFK NH EW++SVKP L PD+S + + + ++ IR+EM
Sbjct: 317 LKALSSVMVSLQRYEFKTNHEEWVKSVKPKLAPDVSNRVLAAINATYENVKVLYKIRSEM 376
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
R+A SLLKDDGILV PT A PP KL K+ S + +R L SIAS+SGCCQV VPLG
Sbjct: 377 RAATQSLLKDDGILVIPTVADPPLKLNTKKGYSPESHDRVIILSSIASMSGCCQVAVPLG 436
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKE 469
+D CP SVSFI+ HG D+FLLDT+ +MY SLQ Q I + S L +T ++E+ KE
Sbjct: 437 KHDDCPISVSFISFHGADKFLLDTIVDMYLSLQAQISIVSNSPLLPDTNGNMDASELLKE 496
Query: 470 KGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDK 529
KGN A+K +W KA+ +YTEAIKLNG+NAT+Y NRAAAYLE G F QAE DC+ AI+LDK
Sbjct: 497 KGNAAFKGGKWNKAVDYYTEAIKLNGSNATFYCNRAAAYLELGCFQQAEEDCSMAISLDK 556
Query: 530 KNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
KNVKAYLRRGTA+E L YYKEA +DF +ALVLEP NK A + +RLRK+
Sbjct: 557 KNVKAYLRRGTAKESLLYYKEAAQDFKHALVLEPHNKAAREAEERLRKLM 606
>gi|44662987|gb|AAS47584.1| chloroplast Toc64-1 [Physcomitrella patens]
Length = 592
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 330/582 (56%), Positives = 423/582 (72%), Gaps = 10/582 (1%)
Query: 7 NLWVLLGLGLAGILLMTKKL-KKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAV 65
+L VL GLGLAGI ++ + L + +D GAFIE +LLPPP P PP APHPL+GL+FA+
Sbjct: 10 SLGVLFGLGLAGIFILRRNLFRLTGGKDNGAFIEYFELLPPPPPPPPSAPHPLSGLTFAI 69
Query: 66 SDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNK 125
D+FDIEG+VTGFG+P+WA TH A+RT+ V LVE GATCIGK ++DE AYSI G NK
Sbjct: 70 KDIFDIEGFVTGFGNPDWASTHEPATRTAAAVKVLVEAGATCIGKLIMDELAYSIIGDNK 129
Query: 126 HYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYG 185
HY TP NPAAP+++PGGSSSG+ VAVAADLVDFSLG DT G VRVP+AFCGILGFRPS+G
Sbjct: 130 HYGTPVNPAAPNRIPGGSSSGSGVAVAADLVDFSLGTDTAGSVRVPAAFCGILGFRPSHG 189
Query: 186 AVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKI 245
AVS +G+ P++ SLDTVG FARDP ILR VGH+LLQLP+ R PR+ IADDCF++ I
Sbjct: 190 AVSTVGVTPMAQSLDTVGCFARDPAILRQVGHILLQLPYMDVRQPRRFFIADDCFKISLI 249
Query: 246 PADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE--------LKNVM 297
P + + V+KS +KL GRQVL+H NLG+Y VPSLK K + L+ M
Sbjct: 250 PTELSLGTVVKSIQKLLGRQVLQHINLGDYVARTVPSLKELQKEISDSNLGSLALLRTAM 309
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
+++QR+EFK NH EW+ +VKP L P ++A LE S ++ + I++E R AIS LL
Sbjct: 310 QILQRWEFKLNHEEWLTTVKPDLAPALAARTKLALETSSNLVPLLQKIKDETRYAISELL 369
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
K+D +LV PT PPKL K E ++N+ L+ +A +S CCQVT+P G +D P +
Sbjct: 370 KNDSLLVMPTVPDIPPKLNTKAEALEVFRNKTLDLICVAGMSSCCQVTMPAGNHDGVPMA 429
Query: 418 VSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKD 477
VS +A+ G DRFLLDTV +Y+++QE+ +A S + +AE+AKEKGN A+K+
Sbjct: 430 VSLLAKQGSDRFLLDTVLAIYSTVQEEDKVAADQP-SIVSDGNSAAAELAKEKGNAAFKE 488
Query: 478 KQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLR 537
K + KA+ FYT+AI+LNGNNATYY+NRA AYL+ SF +AE+DCTKA+NLDK++VKAYLR
Sbjct: 489 KDYKKAVGFYTDAIRLNGNNATYYNNRAMAYLQLCSFSEAESDCTKALNLDKRSVKAYLR 548
Query: 538 RGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
RGTARE LGYYKEA EDF AL+ EPTNK AS + RL+K+
Sbjct: 549 RGTAREFLGYYKEADEDFRQALIFEPTNKTASEALSRLKKLL 590
>gi|30682691|ref|NP_196504.2| translocon at the outer membrane of chloroplasts 64-V [Arabidopsis
thaliana]
gi|357580466|sp|F4KCL7.1|OE64M_ARATH RecName: Full=Outer envelope protein 64, mitochondrial; AltName:
Full=Mitochondrial outer membrane protein 64;
Short=mtOM64; AltName: Full=Translocon at the outer
membrane of chloroplasts 64-V; Short=AtTOC64-V
gi|332004008|gb|AED91391.1| translocon at the outer membrane of chloroplasts 64-V [Arabidopsis
thaliana]
Length = 603
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 315/585 (53%), Positives = 412/585 (70%), Gaps = 15/585 (2%)
Query: 8 LWVLLGLGLAGILLMTKKLKKNIK----QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSF 63
+WV++G+ +AGI+++ + K+ I+ +DFGAF+++ +LLP P P PP A L+GL+F
Sbjct: 17 VWVVIGVTVAGIVILAETRKRRIRALREEDFGAFLDRFELLPFPPPPPPAAKQSLSGLTF 76
Query: 64 AVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGT 123
++SD FD++ Y+TGFG P+W +TH AA +T+ VV+TL++ GATC+GKT++DE + I G
Sbjct: 77 SISDAFDVKDYITGFGCPQWKKTHEAAEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGE 136
Query: 124 NKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPS 183
NKHY TP NP P +PGG SSG+AV+V A+LVDFSLGIDT GGVRVP+AFCGILGFRPS
Sbjct: 137 NKHYGTPINPLMPDNVPGGCSSGSAVSVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPS 196
Query: 184 YGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELL 243
G VS +G++P S SL+TVGWFA DP +L VGH LL L R R +I ADD FEL
Sbjct: 197 QGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAVTHRRQRSLIFADDLFELS 256
Query: 244 KIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN-------- 295
IP + VQVV K+ E L G + KH N+G+Y S VPSL F + +G+ +N
Sbjct: 257 DIPKQKSVQVVRKAIENLSGYKTPKHVNVGQYVASNVPSLAEFCEQSGKSQNSASTLRAL 316
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
VM IQR+EFK NH EW ++ K L P S ++ L+ I++ ++NEMR+ I
Sbjct: 317 SSVMLAIQRHEFKTNHEEWWQTCKSFLGPRFSNDVVTALKSKNESIKSLYRVKNEMRATI 376
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLS-EDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
SLLK+DGILV PT A PPP+L K S ++ +R ++L IAS+SGCCQVT+PLG +
Sbjct: 377 QSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSCIASMSGCCQVTIPLGEHG 436
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGN 472
P SVS + +GGD+FLLDT ++YASLQ+QA +A+ ++T +++E+ KEKGN
Sbjct: 437 DRPISVSLLTYYGGDKFLLDTTLDVYASLQDQAKLASNLAPVSDTNGNMEASEVMKEKGN 496
Query: 473 QAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNV 532
AYK KQW KA++FYTEAIKLNG NATYY NRAAA+LE F QAE DCTKA+ +DKKNV
Sbjct: 497 AAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCFQQAEQDCTKAMLIDKKNV 556
Query: 533 KAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
KAYLRRGTARE L YKEA DF +ALVLEP NK A ++ RLRK
Sbjct: 557 KAYLRRGTARESLVRYKEAAADFRHALVLEPQNKTAKVAEKRLRK 601
>gi|356512046|ref|XP_003524732.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 603
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 315/586 (53%), Positives = 412/586 (70%), Gaps = 14/586 (2%)
Query: 8 LWVLLGLGLAGILLMTKKLK-----KNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLS 62
LW+++G+G+AGI+++ + + K KQDFGAF+E+ +LLP PQP PP A L+ L+
Sbjct: 17 LWLVIGIGVAGIVVLVETRRRTRRGKTHKQDFGAFVERFELLPFPQPPPPAAKQSLSALT 76
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
FA++D FD++ YVTGFG+ W TH AA +T+ VV+ L+ GATC+GKTVVDEF++ I+G
Sbjct: 77 FAINDTFDVKDYVTGFGNSTWKSTHKAAEKTAVVVTALLMSGATCVGKTVVDEFSFGISG 136
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
NK+Y TPT+P PS GGSS G+AVAVAA LVDF++G DT G VR+P++FCGI GFRP
Sbjct: 137 ENKYYGTPTHPQMPSCKLGGSSCGSAVAVAAGLVDFAVGTDTTGCVRIPASFCGIFGFRP 196
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+GAVS +G++P + SLDT+GWFARDP IL VGHVLLQL + R I ADD F+L
Sbjct: 197 SHGAVSTIGVLPNAQSLDTIGWFARDPSILHRVGHVLLQLNSVETKRSRHFIFADDLFQL 256
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK----GFHKTN-----GEL 293
KIP + V+ K+ E + G Q KH NL +Y DS+VPSL+ H+ N L
Sbjct: 257 SKIPTQNTIYVIGKAIENMSGYQAPKHLNLCQYIDSRVPSLRLHQQSTHQQNETSILKTL 316
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+VM +Q YEFK NH EW++S+K L +S + + + I+ +R EMR A
Sbjct: 317 SSVMLSLQGYEFKTNHEEWVKSLKYKLGCGVSDHVIAAINTTYDNIKALYKVRTEMRGAF 376
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
SLLKDDGILV PT A KL K+ S ++ +R F+L SIASVSGCCQVT+PLGY+D
Sbjct: 377 QSLLKDDGILVIPTVAGSQLKLNTKKGFSSEFHDRTFALSSIASVSGCCQVTIPLGYHDD 436
Query: 414 CPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQ 473
C SVSFI+ HG D+FLLDT+ ++Y++LQEQ + + S N ++++E+ KEKGN
Sbjct: 437 CSLSVSFISFHGADKFLLDTILDIYSTLQEQVSVGSYSLPLPNINGNRETSELLKEKGNA 496
Query: 474 AYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVK 533
A+K++QW KA+S+Y+EAIKLNG N TYY NRAAA+L+ G F QA DC KAI LDKKNVK
Sbjct: 497 AFKERQWSKALSYYSEAIKLNGTNTTYYCNRAAAHLKLGCFQQAAEDCGKAILLDKKNVK 556
Query: 534 AYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
AYLRRGTARE L Y+EA+EDF +ALVLEP NK ASL+ RLRK+
Sbjct: 557 AYLRRGTARESLLCYEEALEDFKHALVLEPQNKDASLAEKRLRKLM 602
>gi|297806973|ref|XP_002871370.1| hypothetical protein ARALYDRAFT_325494 [Arabidopsis lyrata subsp.
lyrata]
gi|297317207|gb|EFH47629.1| hypothetical protein ARALYDRAFT_325494 [Arabidopsis lyrata subsp.
lyrata]
Length = 621
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 315/603 (52%), Positives = 413/603 (68%), Gaps = 34/603 (5%)
Query: 8 LWVLLGLGLAGILLMTKKLKKNIK----QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSF 63
+WV++G+ +AGI+++ + K+ IK +DFGAF+++ +LLP P P PP A L+ L+F
Sbjct: 17 VWVVIGVTVAGIVILAETRKRRIKALREEDFGAFLDRFELLPFPPPPPPAAKQSLSALTF 76
Query: 64 AVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGT 123
++SD FD++ Y+TGFG P+W +TH AA +T+ VV+TL++ GATC+GKT++DE + I G
Sbjct: 77 SISDAFDVKDYITGFGSPQWKKTHEAAEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGE 136
Query: 124 NKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPS 183
NKHY TP NP PS +PGG SSG+AV+V A+LVDFSLGIDT GGVR+P+AFCGILGFRPS
Sbjct: 137 NKHYGTPINPLMPSNVPGGCSSGSAVSVGAELVDFSLGIDTTGGVRIPAAFCGILGFRPS 196
Query: 184 YGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELL 243
G VS +G++P S SL+TVGWFA DP +L VGH LL L A R R +I ADD FEL
Sbjct: 197 QGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAVAHRRQRSLIFADDLFELS 256
Query: 244 KIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN-------- 295
IP + V VV K+ E L G Q KH N+G+Y S VPSL F + +G+ +N
Sbjct: 257 DIPKQKSVHVVRKAIENLSGYQTPKHVNVGQYVASNVPSLAEFCEQSGKSQNSASTLKAL 316
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
VM IQR+EFK NH EW ++ K L P S ++ L+ I++ ++ EMR+ I
Sbjct: 317 SSVMLAIQRHEFKTNHEEWSQTCKSFLGPRFSNDVVTALKSRNESIKSLYRVKTEMRATI 376
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLS-EDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
SLLK+DGILV PT A PPPKL K S ++ +R ++L SIAS+SGCCQVT+PLG +
Sbjct: 377 QSLLKEDGILVIPTVADPPPKLNTKNKNSLNEFLDRTYALSSIASMSGCCQVTIPLGQHG 436
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGN 472
P SVSF+ +GGD+FLLDT+ ++YASLQ+QA +A+ ++T +++E+ KEKGN
Sbjct: 437 DRPISVSFLTYYGGDKFLLDTILDVYASLQDQAKLASNLAPVSDTNGNMEASEVMKEKGN 496
Query: 473 QAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNV 532
AYK +QW KA++FYTEAIKLNG NATY+ NRAAA+LE G F QAE DCT+A+ +DKKNV
Sbjct: 497 AAYKGRQWNKAVNFYTEAIKLNGANATYFCNRAAAFLELGCFQQAEQDCTEAMLIDKKNV 556
Query: 533 KAYLRRGTAREMLGYYKEAI-------------------EDFSYALVLEPTNKRASLSAD 573
KAYLRRGTARE L YKEA DF +ALVLEP NK A +
Sbjct: 557 KAYLRRGTARESLVRYKEAAAESTLSGTVLERNIWFIISADFRHALVLEPQNKTAKAAEK 616
Query: 574 RLR 576
RLR
Sbjct: 617 RLR 619
>gi|9955529|emb|CAC05468.1| putative subunit of TOC complex [Arabidopsis thaliana]
Length = 616
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 315/598 (52%), Positives = 412/598 (68%), Gaps = 28/598 (4%)
Query: 8 LWVLLGLGLAGILLMTKKLKKNIK----QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSF 63
+WV++G+ +AGI+++ + K+ I+ +DFGAF+++ +LLP P P PP A L+GL+F
Sbjct: 17 VWVVIGVTVAGIVILAETRKRRIRALREEDFGAFLDRFELLPFPPPPPPAAKQSLSGLTF 76
Query: 64 AVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGT 123
++SD FD++ Y+TGFG P+W +TH AA +T+ VV+TL++ GATC+GKT++DE + I G
Sbjct: 77 SISDAFDVKDYITGFGCPQWKKTHEAAEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGE 136
Query: 124 NKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPS 183
NKHY TP NP P +PGG SSG+AV+V A+LVDFSLGIDT GGVRVP+AFCGILGFRPS
Sbjct: 137 NKHYGTPINPLMPDNVPGGCSSGSAVSVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPS 196
Query: 184 YGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELL 243
G VS +G++P S SL+TVGWFA DP +L VGH LL L R R +I ADD FEL
Sbjct: 197 QGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAVTHRRQRSLIFADDLFELS 256
Query: 244 KIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN-------- 295
IP + VQVV K+ E L G + KH N+G+Y S VPSL F + +G+ +N
Sbjct: 257 DIPKQKSVQVVRKAIENLSGYKTPKHVNVGQYVASNVPSLAEFCEQSGKSQNSASTLRAL 316
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
VM IQR+EFK NH EW ++ K L P S ++ L+ I++ ++NEMR+ I
Sbjct: 317 SSVMLAIQRHEFKTNHEEWWQTCKSFLGPRFSNDVVTALKSKNESIKSLYRVKNEMRATI 376
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLS-EDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
SLLK+DGILV PT A PPP+L K S ++ +R ++L IAS+SGCCQVT+PLG +
Sbjct: 377 QSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSCIASMSGCCQVTIPLGEHG 436
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGN 472
P SVS + +GGD+FLLDT ++YASLQ+QA +A+ ++T +++E+ KEKGN
Sbjct: 437 DRPISVSLLTYYGGDKFLLDTTLDVYASLQDQAKLASNLAPVSDTNGNMEASEVMKEKGN 496
Query: 473 QAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNV 532
AYK KQW KA++FYTEAIKLNG NATYY NRAAA+LE F QAE DCTKA+ +DKKNV
Sbjct: 497 AAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCFQQAEQDCTKAMLIDKKNV 556
Query: 533 KAYLRRGTAREMLGYYKEAI-------------EDFSYALVLEPTNKRASLSADRLRK 577
KAYLRRGTARE L YKEA DF +ALVLEP NK A ++ RLRK
Sbjct: 557 KAYLRRGTARESLVRYKEAAAGYWSVTLWLIISADFRHALVLEPQNKTAKVAEKRLRK 614
>gi|168058781|ref|XP_001781385.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667196|gb|EDQ53832.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 603
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 317/593 (53%), Positives = 411/593 (69%), Gaps = 28/593 (4%)
Query: 10 VLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLF 69
+L+GLGLAG ++ + L+ +K+D GAFIE +L PP P AP PL+GL+FAV D+F
Sbjct: 14 ILIGLGLAGFFVLRRALRLAVKRDNGAFIEYFEL--PPATSPSSAPQPLSGLTFAVKDIF 71
Query: 70 DIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDT 129
D+EG+VTGFG+P+WA TH A+RT+ V LV+ GATC+GK +DE AYSI G NKHY T
Sbjct: 72 DVEGFVTGFGNPDWAATHEPATRTALAVKYLVDSGATCVGKLHMDELAYSIIGDNKHYGT 131
Query: 130 PTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSH 189
P NPAAP+++PGGSSSG+ VAVAADLVDFSLG DT G VRVP+AFCGILGFRPS+GAV
Sbjct: 132 PVNPAAPTRVPGGSSSGSGVAVAADLVDFSLGTDTAGSVRVPAAFCGILGFRPSHGAVPV 191
Query: 190 MGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADR 249
+G+IP++ S DTVG FA+DP ILR VGH+LLQL + R P++ +IADDCFEL IP +
Sbjct: 192 IGVIPMAQSFDTVGCFAKDPTILRQVGHILLQLSYTDVRKPQRFLIADDCFELSLIPNEA 251
Query: 250 VVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE-------LKNVMRLIQR 302
V VI+S +KLFGR+ L+H NLG+Y S VPSLK K G L+ M++IQR
Sbjct: 252 SVGAVIRSIQKLFGRKALQHINLGDYVASAVPSLKVLQKEIGSDMGAISLLRTAMQMIQR 311
Query: 303 YEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGI 362
+EFK NH W+ + P L P +A LE + ++ + I++E R AI+ LLKDD +
Sbjct: 312 WEFKVNHEGWLTTANPNLGPATAARTKAALETTSHLLPLLQRIKDEARYAINDLLKDDML 371
Query: 363 LVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIA 422
LV PT PPKL K E+++NRA L+ IA +SGCCQVT+P G +D P +VS +A
Sbjct: 372 LVLPTVPDIPPKLNTKPESLEEFRNRAMDLICIAGMSGCCQVTMPAGEHDDVPMAVSLLA 431
Query: 423 RHGGDRFLLDTVQNMYASLQ--EQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQW 480
R G DRFLLDT+ +YA++Q ++AD ++ LS F+ +AE+AKEKGN A+K +
Sbjct: 432 RQGSDRFLLDTLLALYATVQVEDKADANQRASLSNGHFD---AAELAKEKGNAAFKRNDF 488
Query: 481 LKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGT 540
AIS YT+AI++ GNN TYY+NRA AYL+ S+ +AEADCTKA+ LDK +VKAYLRRGT
Sbjct: 489 KNAISHYTDAIRIRGNNPTYYNNRAMAYLQLRSYSEAEADCTKALILDKNSVKAYLRRGT 548
Query: 541 AREMLGYYKEAIED--------------FSYALVLEPTNKRASLSADRLRKVF 579
ARE +GYY EA E F ALV EP+NK AS + RL+K+
Sbjct: 549 ARESMGYYNEADEGHKRLPPATALPCAYFRQALVYEPSNKTASEALSRLKKLL 601
>gi|224054324|ref|XP_002298203.1| amidase family protein [Populus trichocarpa]
gi|222845461|gb|EEE83008.1| amidase family protein [Populus trichocarpa]
Length = 599
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 308/586 (52%), Positives = 408/586 (69%), Gaps = 14/586 (2%)
Query: 8 LWVL-LGLGLAGILLM---TKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSF 63
+WVL +G+ +A ++ T++ K K+DFGAF+++ Q+LP PQP PP A L GL+F
Sbjct: 13 VWVLVIGVTVAVGMVAAAETRRRKAKFKEDFGAFVQRFQILPFPQPPPPAAKQTLAGLTF 72
Query: 64 AVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGT 123
A++D+F++E YVTGFG+P+WARTH AA +T+ V+ L++ GA C+GKTV+ E + ++G
Sbjct: 73 AINDIFELEDYVTGFGNPDWARTHEAAEKTAVTVTALLKNGAVCVGKTVMGELGFGVSGE 132
Query: 124 NKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPS 183
N HY TP NP P+ +PGGSSSG+AVAVAA LVDF+LG DT+G +R+P+AFCG+L +RPS
Sbjct: 133 NIHYGTPINPEMPAHVPGGSSSGSAVAVAAGLVDFALGTDTIGCIRIPAAFCGLLSYRPS 192
Query: 184 YGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELL 243
+GAVS +GI+P S SLDTVGW ARDP IL VGH LL+L R R++I ADD F+L
Sbjct: 193 HGAVSTIGILPNSQSLDTVGWLARDPSILLRVGHTLLKLNTVEPRRARRLIFADDLFQLS 252
Query: 244 KIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN-------- 295
K+P + V+ K+ E L G Q +H N G++ VPSLKGF + ++N
Sbjct: 253 KVPKQKAEVVINKAIENLSGYQPQQHINFGQHISLNVPSLKGFLDQSTNMQNGISNLKAL 312
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
M +QR+EFK NH +W++SV+P L D+S + + + I+ IR E+R+ +
Sbjct: 313 SSAMVSLQRHEFKTNHEDWVKSVEPKLALDVSDNLLTAINTTHENIKALCDIRKELRACM 372
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
LLKDDGILV PT A PP KL K+ + + NRA L SIAS+SGCCQVT+PLG D
Sbjct: 373 QILLKDDGILVIPTVADPPSKLNSKKRDTVESHNRALILSSIASMSGCCQVTIPLGKNDG 432
Query: 414 CPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQ 473
CP SVSFI HGGD+FLLDTV +MY+SL+EQ + + + ++E+ KEKGN
Sbjct: 433 CPISVSFITFHGGDKFLLDTVLDMYSSLKEQINFLSNPAPLKDANENFDASELLKEKGNA 492
Query: 474 AYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVK 533
AYK KQW KA+++Y+EAIKLNG NATYYSNRAAAYL+ G F +AE DC AI+LDKKNVK
Sbjct: 493 AYKGKQWNKAVNYYSEAIKLNGKNATYYSNRAAAYLQLGCFQKAEEDCNMAISLDKKNVK 552
Query: 534 AYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
AYLRRGTARE L +YK+A +DF +ALVLEP NK A + RLRK+
Sbjct: 553 AYLRRGTARESLLFYKDAAQDFKHALVLEPQNKVARHAEKRLRKLM 598
>gi|356525874|ref|XP_003531546.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 598
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/585 (53%), Positives = 414/585 (70%), Gaps = 19/585 (3%)
Query: 8 LWVLLGLGLAGILLMT----KKLKKNI-KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLS 62
LW+L+G+GLAG +++ ++ +N+ K+DFGAF+E+++LLP PQP L+ L+
Sbjct: 15 LWLLIGIGLAGAVVVVAETRRRRHRNLPKEDFGAFVERIELLPIPQP---NQTQTLSALT 71
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
FA+ D+FD++GYVTGFG+P+W +TH A +T+ V++ L+ GATC+GKTV+DEF++ I+G
Sbjct: 72 FAIKDIFDVKGYVTGFGNPQWKKTHGEAGKTAIVITALLSDGATCVGKTVMDEFSFGISG 131
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
NK Y TPTNP PS +PGGSSSG+AVAVAA LVDF++G DT G VR+P+AFCGILGFRP
Sbjct: 132 ENKFYGTPTNPQMPSSIPGGSSSGSAVAVAARLVDFAIGTDTTGCVRIPAAFCGILGFRP 191
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+G +S +G++P + SLDTVGWFARDP +L VG VLL L + R+II ADD F+L
Sbjct: 192 SHGVISTIGVLPNAQSLDTVGWFARDPSVLHRVGLVLLPLTSVELKRTRRIIFADDLFQL 251
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH-----KTNG-----E 292
K P+ + ++ K+ E L G Q L+H NL +Y S VPSLKGFH + NG
Sbjct: 252 SKAPSQKTAYIIGKAIENLSGYQSLQHMNLCQYIASNVPSLKGFHEKLTQQQNGLSILKA 311
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
L +VM +Q YEFK NH EW++SVKP L +S + + + I+ +R EMR A
Sbjct: 312 LTSVMFSLQGYEFKTNHEEWVKSVKPRLGRGVSERVNAAMNATHDNIKTLYKVRTEMRGA 371
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
LLKDDGILV PT A P KL ++ S ++ +RAF+L SIAS+SGCCQV +PLG ++
Sbjct: 372 FQHLLKDDGILVIPTVADYPLKLNTEKGFSSEFHDRAFALSSIASISGCCQVAIPLGCHN 431
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGN 472
C S+S I+ HG D+FLL+TV +MY++LQEQ +A L +T +++E+ KEKGN
Sbjct: 432 DCCASISLISAHGVDKFLLNTVLDMYSTLQEQVSVAYALPL-LDTNGSMETSELLKEKGN 490
Query: 473 QAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNV 532
A+K + W KA+ +YTEAI LNG NATYYSNRAAAYLE G F +AE DC AI DKKNV
Sbjct: 491 TAFKGRLWNKAVDYYTEAINLNGTNATYYSNRAAAYLELGCFQEAEEDCNMAILHDKKNV 550
Query: 533 KAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
KAYLRRGTARE+L YKEA++DF +ALVLEP NK ASL+ RLRK
Sbjct: 551 KAYLRRGTAREVLLCYKEALKDFQHALVLEPQNKTASLAEKRLRK 595
>gi|356557561|ref|XP_003547084.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 665
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 310/585 (52%), Positives = 406/585 (69%), Gaps = 19/585 (3%)
Query: 8 LWVLLGLGLAGILLMTKK-----LKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLS 62
LW+L+G+GL G +++ + +K K DFGAF+E+ +LLP PQP L+ L+
Sbjct: 82 LWLLIGIGLVGAVVVVAETRRRRRRKLPKPDFGAFVERFELLPIPQP---NQTQTLSALT 138
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
FA+ D+FD++GYVTGFG+P+W + H+ A +T+ V++ L+ GATC+GKTV+DEF++ I+G
Sbjct: 139 FAIKDIFDVKGYVTGFGNPQWKKMHNEAGKTAIVITALLSNGATCVGKTVMDEFSFGISG 198
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
NK Y TPTNP PS +PGGSSSG+AVAVAA LVDF++G DT G VR+P+AFCGILGFRP
Sbjct: 199 ENKFYGTPTNPQMPSSIPGGSSSGSAVAVAARLVDFAMGTDTTGCVRIPAAFCGILGFRP 258
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+G +S +G++P + SLDTVGWFARDP +L VG VLL L + R+II ADD F+L
Sbjct: 259 SHGVISTIGVLPNAQSLDTVGWFARDPSVLHRVGLVLLPLNSVELKRTRRIIFADDLFQL 318
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF-----HKTNG-----E 292
K P+ + V ++ K+ E L G Q +H NL +Y S VPSLK F H+ NG
Sbjct: 319 CKAPSQKTVYIIGKAIENLSGYQFPQHMNLCQYIASNVPSLKEFREKFTHQQNGVSILKA 378
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
L +VM +Q YEFK NH EW++SVKP L +S + + + I+ +R EM A
Sbjct: 379 LTSVMFYLQGYEFKTNHEEWVKSVKPRLGRGMSERVNAAMNATHDNIKTLYKVRTEMWGA 438
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
LLKDDGILV PT A P KL ++ S ++ +RAF+L SIAS+SGCCQV +PLG ++
Sbjct: 439 FQHLLKDDGILVIPTVADYPLKLNTEKGFSSEFGDRAFALSSIASISGCCQVAIPLGCHN 498
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGN 472
C SVS I+ HG D+FLL+TV +MY++LQEQ +A L +T ++E+ KEKGN
Sbjct: 499 DCCASVSLISAHGADKFLLNTVLDMYSTLQEQVSVAYALPLP-DTNGSMGTSELLKEKGN 557
Query: 473 QAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNV 532
A+K + W KA+ +YTEAI LNG NATYYSNRAAAYLE G F +AE DC AI DKKNV
Sbjct: 558 AAFKGRLWNKAVDYYTEAINLNGTNATYYSNRAAAYLELGCFQEAEEDCNMAILHDKKNV 617
Query: 533 KAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
KAYLRRGTARE+L YKEA++DF +ALVLEP NK ASL+ RLRK
Sbjct: 618 KAYLRRGTARELLLRYKEALKDFQHALVLEPQNKTASLAEKRLRK 662
>gi|357138060|ref|XP_003570616.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Brachypodium distachyon]
Length = 609
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 292/588 (49%), Positives = 404/588 (68%), Gaps = 19/588 (3%)
Query: 9 WVLLGLGLAGILLMTK---------KLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLT 59
W++ G+ +AG++++ + + K + D GAF E+L+L PPPQP PP A L+
Sbjct: 19 WIVAGIAVAGVIVVAEAARRRRRWLRGKCTVPADSGAFCERLELAPPPQPPPPAARQLLS 78
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
GL+FA SD F+IEGYV GFG+P+W RTH AASRT+ V+ L++ GATC+G+TV+DE +
Sbjct: 79 GLTFAASDNFEIEGYVAGFGNPDWKRTHKAASRTAVAVTMLLKQGATCVGRTVMDELGFG 138
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N H TP NP +P+ +PGGS SG+AVAV+A LVDF+LG DT G +R+P++FCG+L
Sbjct: 139 VTGENLHCGTPINPVSPTVVPGGSCSGSAVAVSAQLVDFALGTDTTGDLRIPASFCGLLC 198
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
FRPS+G VS +G I S SLDT+GWFARDP++L VG VLL + +Q++ ADDC
Sbjct: 199 FRPSHGVVSTLGTIANSQSLDTIGWFARDPRVLHRVGDVLLPAASGGLKEKKQLVFADDC 258
Query: 240 FELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN---- 295
FELLK+P + + ++ + L G Q KH N+G+Y S VPSLK F + +L+
Sbjct: 259 FELLKVPKQKTMHIIENAVHTLPGYQPPKHINIGQYISSNVPSLKEFCQHATKLQGGISA 318
Query: 296 ------VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
VM L+QRYEFK NH +W+ +VKP L DIS + + + ++ I++ +RNE
Sbjct: 319 LKALCAVMLLLQRYEFKANHEDWVNTVKPKLGLDISTRVLQAVNFTDDNIKSLYIVRNEW 378
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
R+A+ +LLKD GILV PT A P K ++ LS ++++R ++ + IA++SGCCQ TVPLG
Sbjct: 379 RAALKNLLKDTGILVLPTMAGYPLKRNSRKRLSPEFEDRMYAFVCIAALSGCCQATVPLG 438
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKE 469
+ P S+SF+A HG D+FLL + +MY+++QEQ A+K L N ++E+ KE
Sbjct: 439 NHSDHPISLSFVAPHGSDKFLLRAILDMYSTIQEQLVFASKLALRPVINNDIGASELLKE 498
Query: 470 KGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDK 529
KGN ++K K+W KAI FY+EAIKLN NA YYSNRAAAYLE G F QAEADC KA+ LDK
Sbjct: 499 KGNNSFKIKEWSKAIEFYSEAIKLNDTNAAYYSNRAAAYLELGRFKQAEADCDKALLLDK 558
Query: 530 KNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
KNVKAYLRRGTA+E++ Y+EA++DF +AL LEP N+ A + RL+K
Sbjct: 559 KNVKAYLRRGTAKEVVLNYQEALQDFRHALALEPQNRAALAAEKRLQK 606
>gi|224285989|gb|ACN40706.1| unknown [Picea sitchensis]
Length = 458
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 285/456 (62%), Positives = 359/456 (78%), Gaps = 12/456 (2%)
Query: 5 SANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFA 64
+ + VLLGLGLAGI L +++ KK IK+DFGAF E++QLLPPPQP PP++P+PLTGL+FA
Sbjct: 3 ATKICVLLGLGLAGIFLASRRRKKEIKEDFGAFTERIQLLPPPQPSPPESPYPLTGLTFA 62
Query: 65 VSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTN 124
+ ++FDIEGYVTGFG+P+W +TH A++T+ VV+ +V+GGATC+G+TV+DE AYSING N
Sbjct: 63 IKEIFDIEGYVTGFGNPDWQQTHEPAAQTAPVVTFVVQGGATCVGRTVMDEMAYSINGEN 122
Query: 125 KHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSY 184
KHY TPTNPAAPS++PGGSSSG+AVAVAA+LVDF+LG DT G VRVP++FCGILGFRPS+
Sbjct: 123 KHYGTPTNPAAPSRIPGGSSSGSAVAVAAELVDFALGTDTGGSVRVPASFCGILGFRPSH 182
Query: 185 GAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLK 244
GAVS +G++P++ S DTVG F RDP ILRHVGH+LLQLPF R PR IIIADDCF+L K
Sbjct: 183 GAVSTVGVVPMAQSFDTVGLFTRDPNILRHVGHILLQLPFMEYRQPRGIIIADDCFQLTK 242
Query: 245 IPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT----NGE-------- 292
IP D+ V VV +STEKLFGRQVL H +LGEY ++VPSLK F +GE
Sbjct: 243 IPNDQTVNVVTRSTEKLFGRQVLNHISLGEYIATEVPSLKYFQNEEESRDGECGISALKA 302
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
L + +RL+QRYEFK NH EWI SVKP L P IS + LE + IE+C ++E R A
Sbjct: 303 LCSALRLLQRYEFKMNHEEWINSVKPDLGPGISGRVRAALETNNENIEHCLKAKDEAREA 362
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
++SLLKDD IL+ PTT P PKL KEML E+++ RAF+LL I+ +SGCCQV++P+G +D
Sbjct: 363 VNSLLKDDAILIIPTTPGPAPKLNMKEMLLEEFRIRAFTLLCISGMSGCCQVSIPVGQHD 422
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIA 448
KCP +VS +ARHGGDRFLLDTV+ MY +LQE+ IA
Sbjct: 423 KCPLAVSMMARHGGDRFLLDTVRAMYPTLQEEVKIA 458
>gi|326497425|dbj|BAK05802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 292/595 (49%), Positives = 402/595 (67%), Gaps = 20/595 (3%)
Query: 3 SQSANLWVLLGLGLAGILLMTK---------KLKKNIKQDFGAFIEKLQLLPPPQPLPPK 53
S + W++ G+ +AG++++ + + K + GAF ++L+L PPPQP PP
Sbjct: 12 SSNPRAWIVAGVAVAGVIVLAEVARRPRRWLRGKSSPPPYSGAFCDRLELAPPPQPPPPA 71
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A L L+FAVSD FDIEG+V GFG+P+W RTH AAS T+ V L++ GATC+G+TV+
Sbjct: 72 ARQQLLDLAFAVSDNFDIEGHVAGFGNPDWKRTHKAASHTAVAVKVLLKQGATCVGRTVM 131
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DE + + G N H TP NPA+PS +PGGS SGAAVAV+A LV+F+LG DT G +R+P++
Sbjct: 132 DELGFGVTGENLHCGTPINPASPSVLPGGSCSGAAVAVSAQLVEFALGTDTTGDLRIPAS 191
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCG+LGFR S+G VS +G +P S SLDT+GW ARDP IL VG LL + + RQ+
Sbjct: 192 FCGVLGFRSSHGVVSTLGTLPNSHSLDTIGWLARDPHILSRVGDALLPVAACGLKGKRQL 251
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKL-FGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+ ADDCFELLKIP + V V+ + L G Q KH N+G+Y S VPSLK F + + +
Sbjct: 252 VFADDCFELLKIPNQKTVDVIENAVHTLPGGYQPPKHINIGQYISSNVPSLKEFCEPSTK 311
Query: 293 LK----------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
L+ VM L+QRYEFK+NH +W+ +VKP L ++S + + + ++ I++
Sbjct: 312 LQEGKSALKALCTVMLLLQRYEFKSNHEDWVNTVKPKLGLEVSTRVLQAVNFTDDNIKSL 371
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCC 402
+R E R+A+ +LLKD GILV PT A P K K+ LS +++++ ++ +SIA++SGCC
Sbjct: 372 YIVRTEWRAALKNLLKDTGILVLPTMAGHPLKRNSKQRLSSEFEDKMYAFVSIAALSGCC 431
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQ 462
Q TVPLG ++ P S+SF+A HG D+FLL + +MY+++QEQ +A+K L
Sbjct: 432 QATVPLGNHNDHPISISFVAAHGSDKFLLRAILDMYSTIQEQIVLASKLTLPPVIDRDVD 491
Query: 463 SAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCT 522
++E+ KEKGN ++K KQW KAI FY+ AIKLN NATYY NRAAAYLE G F QAEADC
Sbjct: 492 ASELLKEKGNNSFKRKQWSKAIEFYSGAIKLNETNATYYCNRAAAYLELGRFKQAEADCD 551
Query: 523 KAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
+A+ LDKKNVKAYLRRGTA+E Y+EA++DF +AL LEP NK A + RL+K
Sbjct: 552 QALLLDKKNVKAYLRRGTAKESCMNYQEALQDFRHALALEPQNKTALAAERRLQK 606
>gi|302811504|ref|XP_002987441.1| hypothetical protein SELMODRAFT_42040 [Selaginella moellendorffii]
gi|300144847|gb|EFJ11528.1| hypothetical protein SELMODRAFT_42040 [Selaginella moellendorffii]
Length = 593
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 298/603 (49%), Positives = 401/603 (66%), Gaps = 45/603 (7%)
Query: 10 VLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLF 69
VL+G+G+AG+L+ +++ +K ++ GAFI+ L+L PPP P PP+AP PL GL+FAV D+F
Sbjct: 1 VLVGIGIAGLLIFSRRQRKGVRAGNGAFIQYLELNPPPAPPPPRAPPPLAGLTFAVKDIF 60
Query: 70 DIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDT 129
DIEG++TGFG+P+W +TH A++T+ VV LV GA CIGKT +DE AYSING NKHY T
Sbjct: 61 DIEGFITGFGNPDWLKTHGPATQTAFVVQLLVRAGAACIGKTHMDELAYSINGENKHYGT 120
Query: 130 PTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSH 189
P NPA+P+++PGGSSSG+AVAVAA LVDF+LG DT G VRVP+AFCGI+GFRPS+G +S
Sbjct: 121 PINPASPNRVPGGSSSGSAVAVAAGLVDFALGTDTGGSVRVPAAFCGIIGFRPSHGTIST 180
Query: 190 MGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADR 249
G+IP++ S DTVGWFA++P +LR VG+ LLQ PF R P+++I+ADDCF L P +R
Sbjct: 181 SGVIPMAQSFDTVGWFAKEPNVLRQVGYALLQQPFMEPRQPQRVIMADDCFSLSSAPPER 240
Query: 250 VVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE-----LKNVMRLIQRY- 303
VV + E++ G++ + + ++G Y SK PSL+ F L + LIQRY
Sbjct: 241 TKAVVARCFERVLGKKTMSNMDIGPYLLSKSPSLQAFCDETASSPLVGLSKALSLIQRYC 300
Query: 304 --------------EFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
EFK NH W+ V P L P I + L+ + I S++ E+
Sbjct: 301 FLATASFIACHLRFEFKTNHEAWLSGVNPDLGPGILERVRAALKTTAEEIVLAMSVKAEV 360
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
L+DD +LV PTT PPPKL K +DY+ +AF+LL+IA +SGCCQV++P+G
Sbjct: 361 A------LQDDVLLVLPTTPGPPPKLNTKGKALDDYREKAFALLAIAGMSGCCQVSMPVG 414
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKE 469
+D P + S +AR GGDRFLLD V ++ ++E D+ + N + +AE AKE
Sbjct: 415 TFDDAPLAFSVMARQGGDRFLLDAVLALHVMVKE--DLKNSALPLVNA--KTNAAEAAKE 470
Query: 470 KGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDK 529
KGN A+K+K + KA+S Y+EAI+L+ N+TYY+NRA A+L SFLQ E DC+KAI+LDK
Sbjct: 471 KGNLAFKNKDYHKAVSHYSEAIRLDPLNSTYYNNRAVAHLSMCSFLQVEEDCSKAIDLDK 530
Query: 530 KNVKAYLRRGTAREMLGYYKEA---------------IEDFSYALVLEPTNKRASLSADR 574
KNVKAYLRRGTARE LG Y EA + DF ALVLEPTN+ A + R
Sbjct: 531 KNVKAYLRRGTAREALGSYHEAHDARRCSCFHLLWFFLIDFRQALVLEPTNRTALDAVKR 590
Query: 575 LRK 577
L+K
Sbjct: 591 LKK 593
>gi|413938943|gb|AFW73494.1| hypothetical protein ZEAMMB73_808672 [Zea mays]
Length = 614
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 282/593 (47%), Positives = 393/593 (66%), Gaps = 22/593 (3%)
Query: 8 LWVLLGLGLAGILLMTK---------KLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
+W++ + +AG+L++ + + D G+F ++ +L PP QP PP A H L
Sbjct: 22 VWIVASIAVAGVLVLAEVARRRRRWLRGMSGTAPDAGSFCDRFELHPPAQPPPPAARHIL 81
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+GL+FA SD F+IEGYV GFG+P+W +TH A T+ V+ L + GATC+G+T++DE +
Sbjct: 82 SGLTFAASDNFEIEGYVAGFGNPDWKKTHETARHTAVAVTMLRKQGATCVGRTIMDELGF 141
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N H+ TP NP + S +PGGS SG+AVAVAA L+DF++G DT+G VR+P++FCG+L
Sbjct: 142 GVTGENLHHGTPANPVSSSLVPGGSCSGSAVAVAAQLIDFAIGTDTIGDVRIPASFCGLL 201
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
FRPSYG +S +G I S SLDT+GWFARDP IL VG VLL + RQ + ADD
Sbjct: 202 CFRPSYGVISTLGTIANSQSLDTIGWFARDPCILHRVGEVLLPAAVGGLKQTRQFVFADD 261
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK---- 294
CF+LLK+ + V + + + L G Q KH N+G+Y S VPSLK F + +L+
Sbjct: 262 CFQLLKVSNQKTVHAIKNAVQALRGYQPPKHINIGQYIYSNVPSLKEFCEPATKLEEGTS 321
Query: 295 ------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
VM L+QRYEFK NH EW+ +VKP L DIS + + + + I++ +IRNE
Sbjct: 322 ALKAISTVMLLLQRYEFKANHEEWVNTVKPKLGLDISTRVLQAVNFARENIKSLYAIRNE 381
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+R A+ +LLKD GILV PTTA P K KE LS +++R + + +A++SGCC+VT+P+
Sbjct: 382 LRVALKNLLKDTGILVLPTTAGYPLKRNSKERLSSGFEDRMYKFVGVAALSGCCEVTIPM 441
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLS--TNTFNQKQSAEI 466
D S+SF+A HG D+FLL + + Y+ +Q+Q +A+K + + TN ++E+
Sbjct: 442 ENLDH-HVSLSFVAAHGSDKFLLRNILDTYSLIQDQVVLASKLETAPVTNVDVDVNASEL 500
Query: 467 AKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAIN 526
KEKGN A+K +QW+KAI FY+EAI L+ NATYY NRAAAYLE G F QAEADC +A+
Sbjct: 501 LKEKGNSAFKRRQWIKAIEFYSEAISLSDTNATYYCNRAAAYLELGRFKQAEADCDRALL 560
Query: 527 LDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
LD+KNVKAYLRRG ARE+ YKEA++DF +AL LEP NK A + RL+K+
Sbjct: 561 LDRKNVKAYLRRGFAREVTLNYKEALQDFRHALALEPQNKTALAAERRLQKLL 613
>gi|218191602|gb|EEC74029.1| hypothetical protein OsI_08982 [Oryza sativa Indica Group]
Length = 613
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 286/593 (48%), Positives = 389/593 (65%), Gaps = 25/593 (4%)
Query: 8 LWVLLGLGLAGILLMTK---------KLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
+W++ G+ +AG ++ + + + + DFGAF + ++ P PQP PP A L
Sbjct: 20 VWIVAGVAIAGAIVFVEAARRRRRWLRDRSEVPPDFGAFCYRFEIAPAPQPPPPAARQLL 79
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+GL+FA SD F+IEGYV GFG+P+W RTH AA+RT+ V+ L + G T +G TV+DE +
Sbjct: 80 SGLTFAASDNFEIEGYVAGFGNPDWKRTHKAATRTAVPVTMLQKQGGTYVGSTVMDELGF 139
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
++G N H TP NPA+PS PGGS SG+AVAV+A LVDF+LG DT G VR+P+ FCG+L
Sbjct: 140 GVSGGNLHNGTPINPASPSLFPGGSCSGSAVAVSAQLVDFALGTDTTGDVRIPACFCGVL 199
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
F+ S+G VS +G I S SLDT+GWFARDP +L VG VLL RQ+ ADD
Sbjct: 200 CFKSSHGVVSTLGTIANSQSLDTIGWFARDPSVLHRVGDVLLPAATGGLTQTRQLFFADD 259
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE------ 292
CF+LLK+P ++ V V+ + + L G Q KH N+GEY S VPSLK F + E
Sbjct: 260 CFQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLKDFCEPTVEMLEGMS 319
Query: 293 ----LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L VM L+QRYEFK NH +W+ +VKP L PD S + + + I++ +RNE
Sbjct: 320 ALKALSTVMLLLQRYEFKTNHEDWVNTVKPKLGPDTSTRVLQAVNSKSDNIKSLYIVRNE 379
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+R+A+ +LLKD GILV PTTA P K ++ LS +++R + + IA++SGCCQ +PL
Sbjct: 380 LRAALKTLLKDTGILVLPTTAGYPLKRNARQRLSPGFEDRMSAFVGIATLSGCCQAVIPL 439
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQ----SA 464
G ++ P S+S +A HG D+FLL V M++S++EQ +A SKL T + +A
Sbjct: 440 GSHNDDPISLSLLAAHGSDKFLLRNVLYMFSSIKEQVVLA--SKLVTAPIINRDADFGAA 497
Query: 465 EIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKA 524
E+ KEKGN A+K ++W KA+ FY++AIKLNG NATYYSNRAAAYLE + QAEADC +A
Sbjct: 498 ELLKEKGNSAFKGRKWSKAVEFYSDAIKLNGTNATYYSNRAAAYLELSRYKQAEADCEQA 557
Query: 525 INLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
+ LDKKNVKAYLRRG ARE ++EA++D +AL LEP NK L+ RL+K
Sbjct: 558 LLLDKKNVKAYLRRGIAREAALNHQEALQDIRHALALEPQNKAGLLAERRLQK 610
>gi|115448751|ref|NP_001048155.1| Os02g0754500 [Oryza sativa Japonica Group]
gi|46805946|dbj|BAD17240.1| putative Toc64 [Oryza sativa Japonica Group]
gi|113537686|dbj|BAF10069.1| Os02g0754500 [Oryza sativa Japonica Group]
gi|215697708|dbj|BAG91702.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623695|gb|EEE57827.1| hypothetical protein OsJ_08425 [Oryza sativa Japonica Group]
Length = 613
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 284/592 (47%), Positives = 391/592 (66%), Gaps = 23/592 (3%)
Query: 8 LWVLLGLGLAGILLMTK---------KLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
+W++ G+ +AG ++ + + + + DFGAF + ++ P PQP PP A L
Sbjct: 20 VWMVAGVAIAGAIVFVEAARRRRRWLRDRSEVPPDFGAFCYRFEIAPAPQPPPPAARQLL 79
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+GL+FA SD F+IEGYV GFG+P+W RTH AA+RT+ V+ L + G T +G TV+DE +
Sbjct: 80 SGLTFAASDNFEIEGYVAGFGNPDWKRTHKAATRTAVPVTMLQKQGGTYVGSTVMDELGF 139
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
++G N H TP NPA+PS PGGS SG+AVAV+A LVDF+LG DT G VR+P+ FCG+L
Sbjct: 140 GVSGGNLHNGTPINPASPSLFPGGSCSGSAVAVSAQLVDFALGTDTTGDVRIPACFCGVL 199
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
F+ S+G VS +G I S SLDT+GWFARDP +L VG VLL RQ+ ADD
Sbjct: 200 CFKSSHGVVSTLGTIANSQSLDTIGWFARDPSVLHRVGDVLLPAATGGLTQTRQLFFADD 259
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE------ 292
CF+LLK+P ++ V V+ + + L G Q KH N+GEY S VPSLK F + E
Sbjct: 260 CFQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLKDFCEPTVEMLEGMS 319
Query: 293 ----LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L VM L+QRYEFK NH +W+ +VKP L D S + + + I++ +RNE
Sbjct: 320 ALKALSTVMLLLQRYEFKTNHEDWVNTVKPKLGLDTSTRVLQAVNSKSDNIKSLYIVRNE 379
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+R+A+ +LLKD GILV PTTA P K ++ LS +++R + + IA++SGCCQ +PL
Sbjct: 380 LRAALKNLLKDTGILVLPTTAGYPLKRNARQRLSPGFEDRMSAFVGIATLSGCCQAVIPL 439
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQ---SAE 465
G ++ P S+S +A HG D+FLL V M++S++EQ +A+K ++ N+ +AE
Sbjct: 440 GSHNDHPISLSLLAAHGSDKFLLRNVLYMFSSIKEQVVLASK-LVTAPVINRDADFGAAE 498
Query: 466 IAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAI 525
+ KEKGN A+K ++W KA+ FY++AIKLNG NATYYSNRAAAYLE G + QAEADC +A+
Sbjct: 499 LLKEKGNSAFKGRKWSKAVEFYSDAIKLNGTNATYYSNRAAAYLELGRYKQAEADCEQAL 558
Query: 526 NLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
LDKKNVKAYLRRG ARE + ++EA++D +AL LEP NK L+ RL+K
Sbjct: 559 LLDKKNVKAYLRRGIAREAVLNHQEALQDIRHALALEPQNKAGLLAERRLQK 610
>gi|226491410|ref|NP_001148185.1| LOC100281793 [Zea mays]
gi|195609838|gb|ACG26749.1| amidase [Zea mays]
gi|195614940|gb|ACG29300.1| amidase [Zea mays]
gi|195616542|gb|ACG30101.1| amidase [Zea mays]
Length = 587
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/544 (46%), Positives = 358/544 (65%), Gaps = 22/544 (4%)
Query: 8 LWVLLGLGLAGILLMTK---------KLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
+W++ + +AG+L++ + + D G+F ++ +L PP QP PP A H L
Sbjct: 22 VWIVASIAVAGVLVLAEVARRRRRWLRGMSGTPADAGSFCDRFELHPPAQPPPPAARHIL 81
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+GL+FA SD F+IEGYV GFG+P+W +TH A T+ V+ L + GATC+G+T++DE +
Sbjct: 82 SGLTFAASDNFEIEGYVAGFGNPDWKKTHETARHTAVAVTMLRKQGATCVGRTIMDELGF 141
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N H+ TP NP + S +PGGS SG+AVAVAA LVDF++G DT+G VR+P++FCG+L
Sbjct: 142 GVTGENLHHGTPANPVSSSLVPGGSCSGSAVAVAAQLVDFAIGTDTIGDVRIPASFCGLL 201
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
FRPSYG +S +G I S SLDT+GWFARDP IL VG VLL + RQ + ADD
Sbjct: 202 CFRPSYGVISTLGTIANSQSLDTIGWFARDPCILHRVGEVLLPAAVGGLKQTRQFVFADD 261
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK---- 294
CF+LLK+ + V + + + L G Q KH N+G+Y S VPSLK F + +L+
Sbjct: 262 CFQLLKVSNQKTVHAIKNAVQALHGYQPPKHINIGQYIYSNVPSLKEFCEPATKLEEGTS 321
Query: 295 ------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
VM L+QRYEFK NH EW+ +VKP L DIS + + + + I++ +IRNE
Sbjct: 322 ALKAISTVMLLLQRYEFKANHEEWVNTVKPKLGLDISTRVLQAVNFARENIKSLYAIRNE 381
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+R+A+ +LLKD GILV PTTA P K KE LS +++R + + +A++SGCC+VT+P+
Sbjct: 382 LRAALKNLLKDTGILVLPTTAGYPLKRNSKERLSSGFEDRMYKFVGVAALSGCCEVTIPM 441
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLS--TNTFNQKQSAEI 466
D S+SF+A HG D+FLL + + Y+ +Q+Q +A+K + + TN ++E+
Sbjct: 442 ENLDH-HVSLSFVAAHGSDKFLLRNILDTYSLIQDQVVLASKLETAPVTNVDVDVNASEL 500
Query: 467 AKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAIN 526
KEKGN A+K +QW+KAI FY+EAI L+ NATYY NRAAAYLE G F QAEADC +A+
Sbjct: 501 LKEKGNSAFKRRQWIKAIEFYSEAISLSDTNATYYCNRAAAYLELGRFKQAEADCDRALL 560
Query: 527 LDKK 530
LD+K
Sbjct: 561 LDRK 564
>gi|413938944|gb|AFW73495.1| amidase [Zea mays]
Length = 587
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/546 (46%), Positives = 358/546 (65%), Gaps = 22/546 (4%)
Query: 8 LWVLLGLGLAGILLMTK---------KLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
+W++ + +AG+L++ + + D G+F ++ +L PP QP PP A H L
Sbjct: 22 VWIVASIAVAGVLVLAEVARRRRRWLRGMSGTAPDAGSFCDRFELHPPAQPPPPAARHIL 81
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+GL+FA SD F+IEGYV GFG+P+W +TH A T+ V+ L + GATC+G+T++DE +
Sbjct: 82 SGLTFAASDNFEIEGYVAGFGNPDWKKTHETARHTAVAVTMLRKQGATCVGRTIMDELGF 141
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N H+ TP NP + S +PGGS SG+AVAVAA L+DF++G DT+G VR+P++FCG+L
Sbjct: 142 GVTGENLHHGTPANPVSSSLVPGGSCSGSAVAVAAQLIDFAIGTDTIGDVRIPASFCGLL 201
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
FRPSYG +S +G I S SLDT+GWFARDP IL VG VLL + RQ + ADD
Sbjct: 202 CFRPSYGVISTLGTIANSQSLDTIGWFARDPCILHRVGEVLLPAAVGGLKQTRQFVFADD 261
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK---- 294
CF+LLK+ + V + + + L G Q KH N+G+Y S VPSLK F + +L+
Sbjct: 262 CFQLLKVSNQKTVHAIKNAVQALRGYQPPKHINIGQYIYSNVPSLKEFCEPATKLEEGTS 321
Query: 295 ------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
VM L+QRYEFK NH EW+ +VKP L DIS + + + + I++ +IRNE
Sbjct: 322 ALKAISTVMLLLQRYEFKANHEEWVNTVKPKLGLDISTRVLQAVNFARENIKSLYAIRNE 381
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+R A+ +LLKD GILV PTTA P K KE LS +++R + + +A++SGCC+VT+P+
Sbjct: 382 LRVALKNLLKDTGILVLPTTAGYPLKRNSKERLSSGFEDRMYKFVGVAALSGCCEVTIPM 441
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLS--TNTFNQKQSAEI 466
D S+SF+A HG D+FLL + + Y+ +Q+Q +A+K + + TN ++E+
Sbjct: 442 ENLDH-HVSLSFVAAHGSDKFLLRNILDTYSLIQDQVVLASKLETAPVTNVDVDVNASEL 500
Query: 467 AKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAIN 526
KEKGN A+K +QW+KAI FY+EAI L+ NATYY NRAAAYLE G F QAEADC +A+
Sbjct: 501 LKEKGNSAFKRRQWIKAIEFYSEAISLSDTNATYYCNRAAAYLELGRFKQAEADCDRALL 560
Query: 527 LDKKNV 532
LD+K +
Sbjct: 561 LDRKVI 566
>gi|147801313|emb|CAN77023.1| hypothetical protein VITISV_015334 [Vitis vinifera]
Length = 433
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/430 (55%), Positives = 301/430 (70%), Gaps = 15/430 (3%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
D+GAF+E+ L QP PL GL+FAV D+FD++GYVTGFG+P+WARTH AA
Sbjct: 6 DYGAFMERFIL----QPSSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAML 61
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
T+ V +++GGATC+GKTV+DE AYSING NKHY TPTNP AP ++PGGSSSG+AVAV
Sbjct: 62 TAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAVAVG 121
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A LVDFSLG DT G VRVP+++CGI G RPS+G VS G+IP++ S DTVGWFARDP+IL
Sbjct: 122 AMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDPEIL 181
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
VGHVLL P P QIII +DCF LL IP DRV QV+IKS EKLFG ++KH +L
Sbjct: 182 NRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKHVSL 241
Query: 273 GEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKPALD 321
G+Y + KV SLK F + L MRL+QRYEFKNNH EW+ +V+P L
Sbjct: 242 GDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVRAVQPDLG 301
Query: 322 PDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
P I + E L ++ I+ C+S++ E RSA++ LL D G+LV PT PPPKL
Sbjct: 302 PGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTDPTT 361
Query: 382 SEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
E ++ RAFSLLSIA VSG CQV++PLG YD P +VS +A+HG D FLL+ VQ +Y S+
Sbjct: 362 LESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLYGSI 421
Query: 442 QEQADIATKS 451
+EQ ++A K+
Sbjct: 422 KEQVEVAEKT 431
>gi|359487733|ref|XP_002284823.2| PREDICTED: amidase 1-like [Vitis vinifera]
gi|296088312|emb|CBI36757.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/430 (55%), Positives = 300/430 (69%), Gaps = 15/430 (3%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
++GAF+E+ L QP PL GL+FAV D+FD++GYVTGFG+P+WARTH AA
Sbjct: 6 NYGAFMERFIL----QPSSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAML 61
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
T+ V +++GGATC+GKTV+DE AYSING NKHY TPTNP AP ++PGGSSSG+AVAV
Sbjct: 62 TAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAVAVG 121
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A LVDFSLG DT G VRVP+++CGI G RPS+G VS G+IP++ S DTVGWFARDP+IL
Sbjct: 122 AMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDPEIL 181
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
VGHVLL P P QIII +DCF LL IP DRV QV+IKS EKLFG ++KH +L
Sbjct: 182 NRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKHVSL 241
Query: 273 GEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKPALD 321
G+Y + KV SLK F + L MRL+QRYEFKNNH EW+ V+P L
Sbjct: 242 GDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVREVQPDLG 301
Query: 322 PDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
P I + E L ++ I+ C+S++ E RSA++ LL D G+LV PT PPPKL
Sbjct: 302 PGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTDPTT 361
Query: 382 SEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
E ++ RAFSLLSIA VSG CQV++PLG YD P +VS +A+HG D FLL+ VQ +Y S+
Sbjct: 362 LESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLYGSI 421
Query: 442 QEQADIATKS 451
+EQ ++A K+
Sbjct: 422 KEQVEVAEKT 431
>gi|242065922|ref|XP_002454250.1| hypothetical protein SORBIDRAFT_04g027530 [Sorghum bicolor]
gi|241934081|gb|EES07226.1| hypothetical protein SORBIDRAFT_04g027530 [Sorghum bicolor]
Length = 572
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/593 (43%), Positives = 362/593 (61%), Gaps = 64/593 (10%)
Query: 8 LWVLLGLGLAGILLMTK---------KLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
+W++ G+ +AG++++ + + D G+F ++ +L PPPQP PP A H L
Sbjct: 22 VWIVAGIAVAGVIVLAEVARRRRRWLRGMSGTPPDAGSFCDRFELHPPPQPPPPAARHLL 81
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+GL+FA SD F++EGYV GFG+P+W TH AA T+ V+ L + GATC+G+T++DE +
Sbjct: 82 SGLTFAASDNFEVEGYVAGFGNPDWKNTHEAARHTAVAVTMLRKQGATCVGRTIMDELGF 141
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N H+ TP NP +PS +PGGS SG+AVAVAA LVDF+
Sbjct: 142 GVTGENLHHGTPANPVSPSLVPGGSCSGSAVAVAAQLVDFA------------------- 182
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
+GWFARDP IL VG VLL + RQI+ ADD
Sbjct: 183 -----------------------IGWFARDPCILHRVGEVLLPTAAGGLKQTRQIVFADD 219
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK---- 294
CF+LLK+ + V + + + L G Q KH N+G+Y S VPSLK F + +L+
Sbjct: 220 CFQLLKVSNQKTVHAIKNAVQALRGYQPPKHINIGQYICSNVPSLKEFCEPATKLQEGTS 279
Query: 295 ------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
VM L+QRYEFK NH EW+ +VKP L DIS + + + + I++ ++RNE
Sbjct: 280 ALKAISTVMLLLQRYEFKANHEEWVNTVKPKLGLDISTRVLQAVNFAHENIKSLYAVRNE 339
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+R+A+ +LLKD GILV PTTA P K KE LS +++R + + IA++SGCC+VT+P+
Sbjct: 340 LRAALKNLLKDTGILVLPTTAGYPLKRNSKERLSSGFEDRMYKFVGIAALSGCCEVTIPM 399
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLS--TNTFNQKQSAEI 466
D S+SF+A HG D+FLL TV + Y+ +Q+Q +A+K + + TN ++E+
Sbjct: 400 ENLDH-HVSLSFVAAHGLDKFLLHTVLDTYSLIQDQVVLASKLETAPVTNVDIDVNASEL 458
Query: 467 AKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAIN 526
KEKGN A+K +QW KAI FY+EAI L+ NATYY NRAAAYLE G Q E DC +A+
Sbjct: 459 LKEKGNSAFKRRQWSKAIEFYSEAISLSDTNATYYCNRAAAYLELGRLKQVEGDCDRALL 518
Query: 527 LDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
LD+KNVKAYLRRG ARE+ YKEA++DF +AL LEP NK A + RL+K+
Sbjct: 519 LDRKNVKAYLRRGCAREVTLNYKEALQDFRHALALEPQNKTALAAERRLQKLL 571
>gi|356576771|ref|XP_003556503.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 433
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/434 (54%), Positives = 299/434 (68%), Gaps = 17/434 (3%)
Query: 32 QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
D+GAF+EK L PP P PL L+FAV ++FD+EGYVTGFG+P+WARTH+ A+
Sbjct: 5 SDYGAFMEKFTL--PPNSAPSL---PLNSLTFAVKEIFDVEGYVTGFGNPDWARTHTVAT 59
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
T+ V L+ GATC+GKTV+DE AYSING N HY TP NP AP ++PGGSSSG+AVAV
Sbjct: 60 STAPTVLALLRAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAPDRVPGGSSSGSAVAV 119
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
A+LVDFSLG DT G VRVP+++CGI GFRPS+GA+S G+IP+S S DTVGWFARDP I
Sbjct: 120 GAELVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAISESGVIPMSQSFDTVGWFARDPMI 179
Query: 212 LRHVGHVLLQLP-FAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHE 270
L VG V+LQLP A P IIIA+DCF+L P D V VI++ EKL+G VLKHE
Sbjct: 180 LSRVGGVILQLPDVAPPIRPTCIIIAEDCFQLSSTPFDVVTGTVIQAVEKLYGGDVLKHE 239
Query: 271 NLGEYFDSKVPSLKGF-HKTNGE----------LKNVMRLIQRYEFKNNHNEWIESVKPA 319
LG+Y + VPSLK F K N + L + MRL+QRYEFKNNH EWI +VKP
Sbjct: 240 ILGDYVKTNVPSLKHFMSKENTDQIYSIPSLAALSSAMRLLQRYEFKNNHGEWISAVKPD 299
Query: 320 LDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
L P IS + + L + I+ C SI+ E+ A+++LL D G L+ PT PPPKL
Sbjct: 300 LGPGISERVSDALRTTGENIDICYSIKKELHDALAALLGDFGALMIPTVPGPPPKLQTNT 359
Query: 380 MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
E ++ RAFSLLSIA VSG CQV++PLG Y+ P S+S +ARHG DRFLL V+++Y
Sbjct: 360 SDLEIFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSISLVARHGADRFLLHLVESLYD 419
Query: 440 SLQEQADIATKSKL 453
S++++ T+ KL
Sbjct: 420 SIKDRKQHITEHKL 433
>gi|255542602|ref|XP_002512364.1| amidase, putative [Ricinus communis]
gi|223548325|gb|EEF49816.1| amidase, putative [Ricinus communis]
Length = 500
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/426 (52%), Positives = 298/426 (69%), Gaps = 15/426 (3%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
I D+GAF+EK L +P PL L+FAV D+FD++GYVTGFG+P+WARTHSA
Sbjct: 75 ISPDYGAFMEKFVL----KPSSSSDQLPLHSLTFAVKDIFDVDGYVTGFGNPDWARTHSA 130
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
A+ T+ V ++ GGATC+GK ++DE AYSING N HY TPTNP+AP ++PGGSSSG+AV
Sbjct: 131 ATATAPAVLAVLRGGATCVGKVIMDEMAYSINGENAHYGTPTNPSAPDRVPGGSSSGSAV 190
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AV A LVDFSLG DT G VRVP+++CGILGFRPS+G VS G+IP++ S DTVGWF+R+P
Sbjct: 191 AVGAKLVDFSLGSDTGGSVRVPASYCGILGFRPSHGVVSVSGVIPMAQSFDTVGWFSRNP 250
Query: 210 KILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKH 269
IL+HVG +LLQLP + P QI IA+DCF+L IP RV QV++KS EKLFG ++KH
Sbjct: 251 VILKHVGRLLLQLPDVDRTKPNQIFIAEDCFQLSSIPKKRVSQVLVKSVEKLFGGDIVKH 310
Query: 270 ENLGEYFDSKVPSLKGFHKTN-----------GELKNVMRLIQRYEFKNNHNEWIESVKP 318
NLG+Y + KVPSL+ F L + MR++QRYEFK NH EW+ +VKP
Sbjct: 311 VNLGDYVEDKVPSLRHFMSKEIKEQEYNIAPLAALSSAMRMLQRYEFKTNHGEWVTTVKP 370
Query: 319 ALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGK 378
P + I E + +E I+ +S+R E+R+A+++LL++ GI+ PT PPKL
Sbjct: 371 DFGPGLKERIWEAVRSTEENIDAFQSVRTELRAALTNLLEEFGIIAIPTVPGVPPKLNTD 430
Query: 379 EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
E ++ +AFSLLSI VSG CQV++PLG +D P S+S +A+HG D FLL+ V+ +Y
Sbjct: 431 PTTLEIFRAKAFSLLSITGVSGFCQVSIPLGMHDGLPVSISLLAKHGSDVFLLNVVETLY 490
Query: 439 ASLQEQ 444
+LQE+
Sbjct: 491 DTLQEE 496
>gi|224125294|ref|XP_002319550.1| amidase family protein [Populus trichocarpa]
gi|222857926|gb|EEE95473.1| amidase family protein [Populus trichocarpa]
Length = 427
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/429 (52%), Positives = 294/429 (68%), Gaps = 18/429 (4%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
D+GAF++K L +P PL GL+FAV D+ EGYVTGFGHP+WARTHSAA+
Sbjct: 6 DYGAFMDKFVL----EPTSSAHDQPLHGLTFAVKDM---EGYVTGFGHPDWARTHSAATS 58
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
T+ V ++ GGATC+GKT++DE AYSING N HY TP NP AP ++PGGSSSG+AVAV
Sbjct: 59 TAPAVLAVLRGGATCVGKTIMDEMAYSINGENIHYGTPINPCAPDRVPGGSSSGSAVAVG 118
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A +VDFSLG DT G VRVP+++CGILGFRPS+ AV G+IP++ S DTVGWFARDP IL
Sbjct: 119 AKIVDFSLGTDTGGSVRVPASYCGILGFRPSHDAVPSAGVIPMAQSFDTVGWFARDPVIL 178
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
VGH+LLQ P P Q+IIA+DCF+L IP DR+ QV++KS EK++G +LKH L
Sbjct: 179 SRVGHILLQSPVMDPIKPSQVIIAEDCFQLSNIPNDRLGQVLVKSVEKIYGGHILKHTVL 238
Query: 273 GEYFDSKVPSLKGFHKTN-----------GELKNVMRLIQRYEFKNNHNEWIESVKPALD 321
G+Y KVPSLK F L N MR ++RYEFK+NH EWI +VKP L
Sbjct: 239 GDYVKEKVPSLKHFMSNEIKELEHNIPSLAALSNAMRSLERYEFKDNHGEWITAVKPELG 298
Query: 322 PDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
P IS + E + + ++ C S++ E+ +A+++LL+D GIL PT + PPKL
Sbjct: 299 PAISERVWEAVRTTGENVDACHSVKTELHAALATLLQDFGILAIPTVSGLPPKLQADPTT 358
Query: 382 SEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
+ ++ +AF LLSIA VSG CQV++PLG YD P SVS +A+ G D FLL+ V+++Y +L
Sbjct: 359 LKIFRAKAFGLLSIAGVSGFCQVSIPLGMYDNLPVSVSLLAKQGSDAFLLNVVESLYGTL 418
Query: 442 QEQADIATK 450
+EQ +I K
Sbjct: 419 KEQVEITEK 427
>gi|357441631|ref|XP_003591093.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|355480141|gb|AES61344.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|388518579|gb|AFK47351.1| unknown [Medicago truncatula]
Length = 423
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/422 (54%), Positives = 296/422 (70%), Gaps = 15/422 (3%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
D+GAF+EK +LPP P PL L+FAV D+FD++GYV GFG+P+WARTH AA+
Sbjct: 6 DYGAFMEKF-ILPPNSSSPD---FPLNSLTFAVKDIFDVKGYVAGFGNPDWARTHQAATS 61
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
T+ V ++ GATC+GKTV+DE AYSING N HY TP NP A ++PGGSSSG+AVAV
Sbjct: 62 TAPTVLAILSAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAEDRVPGGSSSGSAVAVG 121
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A LVDFSLG DT G VRVP+++CGI GFRPS+G +S G++P++ S DTVGWFARDPKIL
Sbjct: 122 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGRISKSGVVPMAQSFDTVGWFARDPKIL 181
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
VGHVLLQ P P QIIIA+DCF+L +P D V ++VIK+ +KL+G +L++E L
Sbjct: 182 SAVGHVLLQSPRITPIRPTQIIIAEDCFQLSSVPFDVVSRIVIKAIQKLYGDGLLRYEFL 241
Query: 273 GEYFDSKVPSLKGF---HKTN--------GELKNVMRLIQRYEFKNNHNEWIESVKPALD 321
GEY ++VP LK F KT+ L + MRL+QRYEFKNNH EWI +VKP L
Sbjct: 242 GEYVKAQVPGLKHFMSQEKTDQIYNIPSLAALSSAMRLLQRYEFKNNHGEWINAVKPELG 301
Query: 322 PDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
P IS + + L +E I+ C+SI E+R A++SLL D G+L+ PT PPPKL
Sbjct: 302 PGISERVSDALRTTEENIDICRSIIRELRDALTSLLGDFGVLMIPTVPGPPPKLQTNSSD 361
Query: 382 SEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
E ++ RAFSLLSI VSG CQV++PLG Y+ P SVS +AR+G D FLL V+++Y ++
Sbjct: 362 LEIFRARAFSLLSIVGVSGFCQVSIPLGMYNDLPASVSLVARNGADEFLLHLVESIYDNI 421
Query: 442 QE 443
++
Sbjct: 422 EK 423
>gi|449435683|ref|XP_004135624.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 428
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/424 (52%), Positives = 297/424 (70%), Gaps = 15/424 (3%)
Query: 32 QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
Q +GAF+EK L QP P PLTGL+FAV D+FD++G+VTGFG+PEW RTH A+
Sbjct: 4 QCYGAFMEKFLL----QPSSPSDQLPLTGLTFAVKDIFDMDGHVTGFGNPEWLRTHPPAN 59
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
T+ VST++ GGATCIG+T++DE AYSING N HY TP NP A ++PGGSSSG+AVAV
Sbjct: 60 HTAPTVSTILRGGATCIGRTIMDEMAYSINGENFHYGTPQNPCASDRVPGGSSSGSAVAV 119
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
A+LVDFSLG DT G VRVP+++CGILGFRPS+GAVS G++P++ S+DTVGWFARDP +
Sbjct: 120 GANLVDFSLGTDTGGSVRVPASYCGILGFRPSHGAVSTSGVVPMAQSMDTVGWFARDPVV 179
Query: 212 LRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
L+ VG +LLQ P + PRQ++IA+DCF+L IP++R+ Q + S +KLFG +K +
Sbjct: 180 LKKVGWLLLQQPEVEHQKPRQVLIAEDCFKLSSIPSERLTQAFVNSVKKLFGGHPIKEVS 239
Query: 272 LGEYFDSKVPSLKGFH-----------KTNGELKNVMRLIQRYEFKNNHNEWIESVKPAL 320
LG Y + KVPSLK F + L ++L+QRYEFK NH EW+ + P L
Sbjct: 240 LGNYVEEKVPSLKHFMIEGNAGNEHSIPSLAALARSLQLLQRYEFKINHEEWVRTYNPHL 299
Query: 321 DPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
P IS + E + ++ I+ C SIR E+R A+++LL+D G+L PT PPPKL
Sbjct: 300 GPGISERVSEAMRATDENIDLCHSIRIELRKALAALLEDFGVLAIPTVPGPPPKLNTDVS 359
Query: 381 LSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
+D++ +AFSLLSIA VSG CQV++PLG Y+ P S+S +A HG D FLL+ V ++Y +
Sbjct: 360 ELQDFRAKAFSLLSIAGVSGFCQVSIPLGLYNGLPVSISLVANHGSDGFLLNVVHSLYNT 419
Query: 441 LQEQ 444
L+E+
Sbjct: 420 LEEE 423
>gi|449518011|ref|XP_004166037.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 428
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/424 (52%), Positives = 297/424 (70%), Gaps = 15/424 (3%)
Query: 32 QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
Q +GAF+EK L QP P PLTGL+FAV D+FD++G+VTGFG+PEW RTH A+
Sbjct: 4 QCYGAFMEKFLL----QPSSPSDQLPLTGLTFAVKDIFDMDGHVTGFGNPEWLRTHPPAN 59
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
T+ VST++ GGATCIG+T++DE AYSING N HY TP NP A ++PGGSSSG+AVAV
Sbjct: 60 HTAPTVSTILRGGATCIGRTIMDEMAYSINGENFHYGTPQNPCASDRVPGGSSSGSAVAV 119
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
A+LVDFSLG DT G VRVP+++CGILGFRPS+GAVS G++P++ S+DTVGWFARDP +
Sbjct: 120 GANLVDFSLGTDTGGSVRVPASYCGILGFRPSHGAVSTSGVVPMAQSMDTVGWFARDPVV 179
Query: 212 LRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
L+ VG +LLQ P + PRQ++IA+DCF+L IP++R+ Q + S +KLFG +K +
Sbjct: 180 LKKVGWLLLQQPEVEHQKPRQVLIAEDCFKLSSIPSERLTQAFVNSVKKLFGGHPIKEVS 239
Query: 272 LGEYFDSKVPSLKGFH-----------KTNGELKNVMRLIQRYEFKNNHNEWIESVKPAL 320
LG Y + KVPSLK F + L ++L+QRYEFK NH EW+ + P L
Sbjct: 240 LGNYVEEKVPSLKHFMIEGNAGNEHSIPSLAALARSLQLLQRYEFKINHEEWVRTYNPHL 299
Query: 321 DPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
P IS + E + ++ I+ C SIR E+R A+++LL+D G+L PT PPPKL
Sbjct: 300 GPGISERVSEAMRATDENIDLCHSIRIELRKALAALLEDFGVLAIPTVPGPPPKLNTDVS 359
Query: 381 LSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
+D++ +AFSLLSIA VSG CQV++PLG Y+ P S+S +A HG D FLL+ V ++Y +
Sbjct: 360 ELQDFRAKAFSLLSIAGVSGFCQVSIPLGLYNGLPVSISLVANHGSDGFLLNVVHSLYNT 419
Query: 441 LQEQ 444
L+E+
Sbjct: 420 LEEE 423
>gi|356535097|ref|XP_003536085.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 433
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/434 (53%), Positives = 291/434 (67%), Gaps = 17/434 (3%)
Query: 32 QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
D+GAF EK L PP P PL L+FAV ++FD EGYVTGFG+P+WARTH A+
Sbjct: 5 SDYGAFTEKFTL--PPNSAPAL---PLKSLTFAVKEIFDTEGYVTGFGNPDWARTHPVAT 59
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
T+ L+ GATC+GKTV+DE AYSING N HY TP NP AP ++PGGSSSG+AVAV
Sbjct: 60 STAPTALALLRAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAPDRVPGGSSSGSAVAV 119
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
A LVDFSLG DT G VRVP+++CGI GFRPS+GAVS G+IP+S S DTVGWFARDP I
Sbjct: 120 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSESGVIPMSQSFDTVGWFARDPMI 179
Query: 212 LRHVGHVLLQLP-FAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHE 270
L VG V+LQLP A P IIIA+DCF+L P D V VIK+ EKL+G VLK E
Sbjct: 180 LSRVGGVILQLPDVAPPIRPTSIIIAEDCFQLSSTPFDVVTGTVIKAVEKLYGGDVLKPE 239
Query: 271 NLGEYFDSKVPSLKGFHKTN-----------GELKNVMRLIQRYEFKNNHNEWIESVKPA 319
LG+Y + VPSLK F + L + MRL+QR+EFKNNH EWI +VKP
Sbjct: 240 ILGDYVKTNVPSLKHFMSKDNTDQIYNIPSLAALSSAMRLLQRFEFKNNHGEWISAVKPD 299
Query: 320 LDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
L P IS + + L + I+ C SI+ E+ A+S+LL D G+L+ PT PPPKL
Sbjct: 300 LGPGISERVSDALRTTGENIDICYSIKRELHDALSALLGDFGVLMIPTVPGPPPKLQTNT 359
Query: 380 MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
E ++ RAFSLLSIA VSG CQV++PLG Y+ P S+S +ARHG D+FLL V+++Y
Sbjct: 360 SDLEIFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSISLVARHGADKFLLHLVESLYD 419
Query: 440 SLQEQADIATKSKL 453
S++++ + KL
Sbjct: 420 SIEDRKQHIIEHKL 433
>gi|215272285|dbj|BAG84637.1| indole-3-acetamide hydrolase [Nicotiana tabacum]
Length = 425
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/424 (51%), Positives = 294/424 (69%), Gaps = 16/424 (3%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPH-PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
++GA IEK L QP+ + PL GL+FAV D+FD+EG++TGFG+P+WA+THSAA+
Sbjct: 5 EYGALIEKFTL----QPICSSSEQLPLNGLTFAVKDIFDVEGHITGFGNPDWAKTHSAAT 60
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
T+T V TL++ GATCI KTV+DE AYSING N HY TP NP +P ++PGGSSSG+AVAV
Sbjct: 61 STATTVLTLLKAGATCIAKTVMDEMAYSINGENVHYGTPVNPVSPDRVPGGSSSGSAVAV 120
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
A LVDFSLG DT G VRVP+++CGI G RPS+G VS +G+ P++ S DTVGWFARDP I
Sbjct: 121 GAKLVDFSLGTDTGGSVRVPASYCGIYGIRPSHGVVSTVGVTPMAQSFDTVGWFARDPLI 180
Query: 212 LRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
L+ VG VLLQ P P IIIA+DCF+LL ++++++V++ S EKL+G ++K+ +
Sbjct: 181 LKQVGRVLLQSPQVNSVHPTNIIIAEDCFKLLDSKSNQLIEVLVSSVEKLYGSHMIKYAS 240
Query: 272 LGEYFDSKVPSLKGFHKT---NGE--------LKNVMRLIQRYEFKNNHNEWIESVKPAL 320
+G+ + VPSLK F N E L MRL+QRYEFK NH EW+ +VKP+L
Sbjct: 241 VGDCIEGNVPSLKKFMTLGTGNDESYIPSLLALSAAMRLLQRYEFKENHGEWVSTVKPSL 300
Query: 321 DPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
P I+ + E L+ ++ I+ C S++ E+R+A+++LL D GIL PT PPPKL
Sbjct: 301 GPGIAERVWEALKATDENIDVCHSVKAELRAALTALLGDSGILAIPTVPGPPPKLRTDTS 360
Query: 381 LSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
E ++ +AFSLLSIA VSG CQV++PLG D P SVS + +HG D LLD V+ ++
Sbjct: 361 ALEGFRVKAFSLLSIAGVSGFCQVSIPLGMQDNLPISVSLLGKHGSDWLLLDAVEAIHNV 420
Query: 441 LQEQ 444
L+ Q
Sbjct: 421 LKGQ 424
>gi|297843692|ref|XP_002889727.1| hypothetical protein ARALYDRAFT_888131 [Arabidopsis lyrata subsp.
lyrata]
gi|297335569|gb|EFH65986.1| hypothetical protein ARALYDRAFT_888131 [Arabidopsis lyrata subsp.
lyrata]
Length = 425
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/424 (52%), Positives = 287/424 (67%), Gaps = 19/424 (4%)
Query: 31 KQDFGAFIEKLQLLPPP-QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
DFGAFIEK+ + P LPP L GL+FA+ D+FD+EG VTGFG+P+W RTH+A
Sbjct: 4 NNDFGAFIEKVTISPTSTSSLPPS----LQGLTFAIKDIFDVEGRVTGFGNPDWLRTHTA 59
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
A+ T+ VVS+L+E GAT +G T++DE AYSING N HY TP NP A ++PGGSSSG+AV
Sbjct: 60 ATSTAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAV 119
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
VAA LVDFS+G DT G VRVP+++CGI GFRPS+GAVS +G+ P++ S DTVGWFARD
Sbjct: 120 VVAARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGVTPMAQSFDTVGWFARDT 179
Query: 210 KILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLF-GRQVLK 268
L+ VG VLLQ P Q+IIADDCF+L +P D +VQ ++ S EK F G V+K
Sbjct: 180 ATLKRVGCVLLQQDHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVK 239
Query: 269 HENLGEYFDSKVPSLKGFHKTNG-------------ELKNVMRLIQRYEFKNNHNEWIES 315
NLGEY + VPSLK F ++ L + MRL+QR+EFK NH WI
Sbjct: 240 EVNLGEYIEQNVPSLKHFMTSDDVTTQQELCIPSLMALSSSMRLLQRHEFKINHGAWISL 299
Query: 316 VKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL 375
VKP P ISA I E + SE I+ C+S+++E+ +A+S+LL + G+LV PT PPP L
Sbjct: 300 VKPEFGPGISARIEEAIRTSEEKIDLCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHL 359
Query: 376 GGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
E +++RAFSLLSIA VSG CQV++PLG ++ P SVS +A++G D FLL V
Sbjct: 360 QANVAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFLLSLVD 419
Query: 436 NMYA 439
++ A
Sbjct: 420 SLAA 423
>gi|18390964|ref|NP_563831.1| amidase 1 [Arabidopsis thaliana]
gi|75262859|sp|Q9FR37.1|AMI1_ARATH RecName: Full=Amidase 1; Short=AtAMI1; AltName: Full=Translocon at
the outer membrane of chloroplasts 64-I; Short=AtTOC64-I
gi|11493702|gb|AAG35612.1|AF202077_1 amidase [Arabidopsis thaliana]
gi|14335038|gb|AAK59783.1| At1g08980/F7G19_15 [Arabidopsis thaliana]
gi|28416539|gb|AAO42800.1| At1g08980/F7G19_15 [Arabidopsis thaliana]
gi|332190257|gb|AEE28378.1| amidase 1 [Arabidopsis thaliana]
Length = 425
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 286/423 (67%), Gaps = 17/423 (4%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
DFGAFIEK+ + +P L GL+FA+ D+FD+EG VTGFG+P+W RTHSAA
Sbjct: 4 NNDFGAFIEKVTIS---PTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAA 60
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ T+ VVS+L+E GAT +G T++DE AYSING N HY TP NP A ++PGGSSSG+AVA
Sbjct: 61 TSTAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVA 120
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VAA LVDFS+G DT G VRVP+++CGI GFRPS+GAVS +G+ P++ S DTVGWFARD
Sbjct: 121 VAARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTA 180
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLF-GRQVLKH 269
L+ VG VLLQ P Q+IIADDCF+L +P D +VQ ++ S EK F G V+K
Sbjct: 181 TLKRVGCVLLQQHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVKK 240
Query: 270 ENLGEYFDSKVPSLKGFHKTNG-------------ELKNVMRLIQRYEFKNNHNEWIESV 316
NLGEY VPSLK F ++ L + MRL+QR+EFK NH WI SV
Sbjct: 241 VNLGEYIGQNVPSLKHFMTSDDVTTQQEFCIPSLMALSSSMRLLQRHEFKINHGAWISSV 300
Query: 317 KPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG 376
KP P IS I E + S+ I++C+S+++E+ +A+S+LL + G+LV PT PPP L
Sbjct: 301 KPEFGPGISERIEEAIRTSDEKIDHCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHLQ 360
Query: 377 GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQN 436
E +++RAFSLLSIA VSG CQV++PLG ++ P SVS +A++G D FLL V +
Sbjct: 361 ANVAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFLLSLVDS 420
Query: 437 MYA 439
+ A
Sbjct: 421 LAA 423
>gi|449435685|ref|XP_004135625.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 430
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/427 (51%), Positives = 291/427 (68%), Gaps = 17/427 (3%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
D+GAFIEK L Q P PL+GL+FAV D+FDIEGYV GFG+PEW RTH A++
Sbjct: 5 DYGAFIEKFLL----QMSSPSDKLPLSGLTFAVKDIFDIEGYVAGFGNPEWLRTHPPANQ 60
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
T+ V T++ GGATCIGKT++DE A+SING N HY TP NP A ++PGGSSSG+ VAVA
Sbjct: 61 TAPAVLTILRGGATCIGKTIMDEMAFSINGENFHYGTPQNPHASDRIPGGSSSGSGVAVA 120
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A LVDFSLG DT G VRVP+++CGILGFRPS+G VS G+IP++ S DTVGWFARD IL
Sbjct: 121 AKLVDFSLGTDTGGSVRVPASYCGILGFRPSHGVVSTSGVIPMTQSFDTVGWFARDSAIL 180
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELL-KIPADRVVQVVIKSTEKLFGRQVLKHEN 271
+ VG +LLQ P P ++ IA+DCF+LL I ++R+ Q + S EKLFG ++K +
Sbjct: 181 KRVGWLLLQEPEIEHYKPTKVFIAEDCFKLLSNITSERLTQAFVSSVEKLFGGHLIKQIS 240
Query: 272 LGEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKPAL 320
LG+Y + KVPSLK F + L R +QR+EF NH EW+ S L
Sbjct: 241 LGKYVEDKVPSLKHFMIEENDGYKHSIPSLAALVRSKRFLQRHEFNINHGEWVRSYHSHL 300
Query: 321 DPDISAEIGEML-EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
P IS I E + E+++ I+ +SI+ E+R A+++LL+D G+L PT PPPKL
Sbjct: 301 GPGISERILEFIREVTDENIDLSRSIQIELREALAALLEDFGVLAIPTVPGPPPKLNTDI 360
Query: 380 MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
D++ +AFSLL+IA+VSG CQV+VPLG Y+ P S+S +A+HG D FLL+ V ++Y+
Sbjct: 361 SEQYDFRAKAFSLLTIAAVSGVCQVSVPLGLYNGLPVSISLLAKHGADGFLLNLVDSLYS 420
Query: 440 SLQEQAD 446
+L+E+ +
Sbjct: 421 TLKEEVE 427
>gi|449518013|ref|XP_004166038.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 430
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/427 (50%), Positives = 291/427 (68%), Gaps = 17/427 (3%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
D+GAFIEK L Q P PL+GL+FAV D+FDIEGYV GFG+PEW RTH A++
Sbjct: 5 DYGAFIEKFLL----QMSSPSDKLPLSGLTFAVKDIFDIEGYVAGFGNPEWLRTHPPANQ 60
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
T+ V T++ GGATCIGKT++DE A+SING N HY TP NP A ++PGGSSSG+ VAVA
Sbjct: 61 TAPAVLTILRGGATCIGKTIMDEMAFSINGENFHYGTPQNPHASDRIPGGSSSGSGVAVA 120
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A LVDFSLG DT G VRVP+++CGILGFRPS+G VS G+IP++ S DTVGWFARD IL
Sbjct: 121 AKLVDFSLGTDTGGSVRVPASYCGILGFRPSHGVVSTSGVIPMTQSFDTVGWFARDSAIL 180
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELL-KIPADRVVQVVIKSTEKLFGRQVLKHEN 271
+ VG +LLQ P P ++ IA+DCF+LL I ++R+ Q + S EKLFG ++K +
Sbjct: 181 KRVGWLLLQEPEIEHYKPTKVFIAEDCFKLLSNITSERLTQAFVSSVEKLFGGHLIKQIS 240
Query: 272 LGEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKPAL 320
LG+Y + KVPSLK F + L R +QR+EF NH EW+ S L
Sbjct: 241 LGKYVEDKVPSLKHFMIEENDGYKHSIPSLAALVRSKRFLQRHEFNINHGEWVRSYHSHL 300
Query: 321 DPDISAEIGEML-EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
P IS I E + E+++ I+ +SI+ E+R A+++L++D G+L PT PPPKL
Sbjct: 301 GPGISERILEFIREVTDENIDLSRSIQIELREALAALVEDFGVLAIPTVPGPPPKLNTDI 360
Query: 380 MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
D++ +AFSLL+IA+VSG CQV+VPLG Y+ P S+S +A+HG D FLL+ V ++Y+
Sbjct: 361 SEQYDFRAKAFSLLTIAAVSGVCQVSVPLGLYNGLPVSISLLAKHGADGFLLNLVDSLYS 420
Query: 440 SLQEQAD 446
+L+E+ +
Sbjct: 421 TLKEEVE 427
>gi|242046326|ref|XP_002461034.1| hypothetical protein SORBIDRAFT_02g039510 [Sorghum bicolor]
gi|241924411|gb|EER97555.1| hypothetical protein SORBIDRAFT_02g039510 [Sorghum bicolor]
Length = 437
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 271/424 (63%), Gaps = 16/424 (3%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
D+GAF+EK +LLPP + PL GL+FA+ D+FDI G VTGFG+P+WARTH+ A
Sbjct: 6 DYGAFMEKFELLPPQS----QQHLPLHGLTFAIKDIFDISGRVTGFGNPDWARTHAPAGA 61
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
TS VV + GA IGKTV+DE AYSING N HY TPTNP AP ++PGGSSSG+AVAV
Sbjct: 62 TSPVVLATLAAGAISIGKTVMDEMAYSINGENAHYGTPTNPCAPDRVPGGSSSGSAVAVG 121
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A LVDF+LG DT G VRVP+A+CGI G RPS+G VS +IP+S DTVGWFARD L
Sbjct: 122 AKLVDFALGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMSQMFDTVGWFARDLSTL 181
Query: 213 RHVGHVLLQLPFAAQ-RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
V +VLL LP + P I DCFE+L D+ Q++ S K FG + + N
Sbjct: 182 SRVSNVLLPLPADNTIKRPTHFKIPKDCFEILGSLNDQTYQILNASVAKRFGNDAVDNRN 241
Query: 272 LGEYFDSKVPS----LKGFHKTNGE-------LKNVMRLIQRYEFKNNHNEWIESVKPAL 320
LGE+ S VP+ + F ++ + VMR +QR EFK NH EW+ +V+P L
Sbjct: 242 LGEFVSSNVPTVGKFISDFSRSEAPSVPALSVISYVMRCLQRSEFKANHAEWVNTVRPNL 301
Query: 321 DPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
P I + E + + +E+ ++ E + A+S+L+KDDGILV PT PPKL + +
Sbjct: 302 GPGIRERVYEAIASEDGPMEDFHVLKTEFKLALSALIKDDGILVIPTVPGSPPKLRMEAV 361
Query: 381 LSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
E+++ RAFSLLSIA +SG CQ+++PLG P SVS +A HG DRFLL Q +Y +
Sbjct: 362 ALENFRARAFSLLSIAGLSGFCQLSIPLGVRGGVPVSVSLVACHGADRFLLSVAQELYET 421
Query: 441 LQEQ 444
L+E+
Sbjct: 422 LKEE 425
>gi|293337129|ref|NP_001170670.1| uncharacterized protein LOC100384731 [Zea mays]
gi|238006782|gb|ACR34426.1| unknown [Zea mays]
gi|414590908|tpg|DAA41479.1| TPA: hypothetical protein ZEAMMB73_492598 [Zea mays]
Length = 444
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 278/430 (64%), Gaps = 26/430 (6%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPH----PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHS 88
++GAF+EK ++LP ++ H PL GL+FA+ D+FDI G VTGFG+P+WARTH+
Sbjct: 9 EYGAFMEKFKMLPS------QSQHQQQLPLHGLTFAIKDIFDIGGRVTGFGNPDWARTHA 62
Query: 89 AASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAA 148
A TS VV + GA IGKTV+DE AYSING N HY TPTNP AP ++PGGSSSG+A
Sbjct: 63 PAGATSPVVLAALAAGAISIGKTVMDEMAYSINGENAHYGTPTNPCAPDRVPGGSSSGSA 122
Query: 149 VAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
VAVAA LVDF+LG DT G VRVP+A+CGI G RPS+G VS +IP+S DTVGWFARD
Sbjct: 123 VAVAAKLVDFALGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMSQMFDTVGWFARD 182
Query: 209 PKILRHVGHVLLQLPFAAQ---RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQ 265
+L V +VL LP AA + P + I DCFE+L +D+ Q++ S K FG
Sbjct: 183 LSMLSCVSNVL--LPLAADNTIKQPTHVTIPKDCFEILGSLSDQTYQILNASVAKRFGND 240
Query: 266 VLKHENLGEYFDSKVPS----LKGFHKTNGE-------LKNVMRLIQRYEFKNNHNEWIE 314
+ + NLGE+ + VP+ + F ++ + VMR +QR EFK NH EW++
Sbjct: 241 AVDNRNLGEFVSANVPTVGKFISDFSRSEAPSVPALSVISYVMRCLQRSEFKANHGEWVK 300
Query: 315 SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPK 374
+VKP L P I + E + + +E+ ++ E +SA+S+L+KDDGIL PT PPK
Sbjct: 301 TVKPNLGPGIRERVHEAIASEDGPMEDFHVLKTEFKSALSALIKDDGILAIPTVPGSPPK 360
Query: 375 LGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTV 434
L + + E+++ RAFSLLSIA +SG CQ+++PLG P SVS +A HG DRFLL
Sbjct: 361 LRMEAVALENFRARAFSLLSIAGLSGFCQLSIPLGVRHGVPVSVSLVACHGADRFLLSVA 420
Query: 435 QNMYASLQEQ 444
Q +Y +L+++
Sbjct: 421 QELYGTLKQE 430
>gi|115456912|ref|NP_001052056.1| Os04g0118100 [Oryza sativa Japonica Group]
gi|32451277|emb|CAE01284.1| OSJNBa0020P07.1 [Oryza sativa Japonica Group]
gi|113563627|dbj|BAF13970.1| Os04g0118100 [Oryza sativa Japonica Group]
Length = 435
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/427 (48%), Positives = 278/427 (65%), Gaps = 17/427 (3%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
+ D+GAF+E+ L PP PL GL+FA+ D+FDI G VTGFG+P+WARTH+ A
Sbjct: 8 RGDYGAFMERFVLP-----PPPSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPA 62
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ TS VV + GAT +G T++DE AYSING N HY TPTNP AP ++PGGSSSG+AVA
Sbjct: 63 AATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAVA 122
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VAA+LVDFSLG DT G VRVP+A+CGI G RPS+G VS +IP++ DTVGWF+RD
Sbjct: 123 VAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLS 182
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHE 270
L V VLL LP + P Q+ I DCF++L DR Q++ S K F Q+L +
Sbjct: 183 TLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLDDRTYQIINASVAKRFDSQILDNR 242
Query: 271 NLGEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKPA 319
NLG++ VPS+ F E + +VMR +QR +FK NH EW+ +VKP
Sbjct: 243 NLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPN 302
Query: 320 LDPDISAEIGEMLEISET-VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGK 378
L P + I E + + +E+ ++IR E +SA+++LLKD GIL PT PPPK+G +
Sbjct: 303 LGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGME 362
Query: 379 EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
E+++ RAFSLLSIA +SG CQV++PLG + P SVS +ARHG D FLL+ V+ +Y
Sbjct: 363 AAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELY 422
Query: 439 ASLQEQA 445
+L ++A
Sbjct: 423 QTLIDEA 429
>gi|125547023|gb|EAY92845.1| hypothetical protein OsI_14646 [Oryza sativa Indica Group]
Length = 435
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/427 (48%), Positives = 278/427 (65%), Gaps = 17/427 (3%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
+ D+GAF+E+ L PP PL GL+FA+ D+FDI G VTGFG+P+WARTH+ A
Sbjct: 8 RGDYGAFMERFVLP-----PPPSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPA 62
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ TS VV + GAT +G T++DE AYSING N HY TPTNP AP ++PGGSSSG+AVA
Sbjct: 63 AATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAVA 122
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VAA+LVDFSLG DT G VRVP+A+CGI G RPS+G VS +IP++ DTVGWF+RD
Sbjct: 123 VAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLS 182
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHE 270
L V VLL LP + P Q+ I DCF++L DR Q++ S K F Q++ +
Sbjct: 183 TLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLNDRTYQIINASVAKRFDSQIIDNR 242
Query: 271 NLGEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKPA 319
NLG++ VPS+ F E + +VMR +QR +FK NH EW+ +VKP
Sbjct: 243 NLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPN 302
Query: 320 LDPDISAEIGEMLEISET-VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGK 378
L P + I E + + +E+ ++IR E +SA+++LLKD GIL PT PPPK+G +
Sbjct: 303 LGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGME 362
Query: 379 EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
E+++ RAFSLLSIA +SG CQV++PLG + P SVS +ARHG D FLL+ V+ +Y
Sbjct: 363 AAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELY 422
Query: 439 ASLQEQA 445
+L ++A
Sbjct: 423 QTLIDEA 429
>gi|116308869|emb|CAH66005.1| H0613H07.3 [Oryza sativa Indica Group]
Length = 435
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/427 (48%), Positives = 278/427 (65%), Gaps = 17/427 (3%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
+ D+GAF+E+ L PP PL GL+FA+ D+FDI G VTGFG+P+WARTH+ A
Sbjct: 8 RGDYGAFMERFVLP-----PPPSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPA 62
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ TS VV + GAT +G T++DE AYSING N HY TPTNP AP ++PGGSSSG+AVA
Sbjct: 63 AATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAVA 122
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VAA+LVDFSLG DT G VRVP+A+CGI G RPS+G VS +IP++ DTVGWF+RD
Sbjct: 123 VAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLS 182
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHE 270
L V VLL LP + P Q+ I DCF++L DR Q++ S K F Q++ +
Sbjct: 183 TLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLNDRTYQIINASVAKRFDSQIIDNR 242
Query: 271 NLGEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKPA 319
NLG++ VPS+ F E + +VMR +QR +FK NH EW+ +VKP
Sbjct: 243 NLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPN 302
Query: 320 LDPDISAEIGEMLEISET-VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGK 378
L P + I E + + +E+ ++IR E +SA+++LLKD GIL PT PPPK+G +
Sbjct: 303 LGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGME 362
Query: 379 EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
E+++ RAFSLLSIA +SG CQV++PLG + P SVS +ARHG D FLL+ V+ +Y
Sbjct: 363 AAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELY 422
Query: 439 ASLQEQA 445
+L ++A
Sbjct: 423 QTLIDEA 429
>gi|357166870|ref|XP_003580892.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Brachypodium distachyon]
Length = 440
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/429 (47%), Positives = 277/429 (64%), Gaps = 15/429 (3%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
K D GAF+EK LLP P P + PL GL+FA+ D+FDI G VTGFG+P+W+RTH A
Sbjct: 5 KGDHGAFMEKFLLLPLP-PTEEQQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWSRTHGPA 63
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ T+ V L+ GA +G+TV+DE AYSING N HY TP NP AP ++PGGSSSG+AVA
Sbjct: 64 AATAPAVLALLAAGAAAVGRTVMDEMAYSINGENAHYGTPANPCAPDRVPGGSSSGSAVA 123
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VAA L DFSLG DT G VRVP+A+CGI G RPS+G VS +IP++ DTVGWFARD
Sbjct: 124 VAASLADFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMAQMFDTVGWFARDLA 183
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPA-DRVVQVVIKSTEKLFGRQVLKH 269
L V +VLL LP R P +++I DCFE+L D +++ S K+FG + +
Sbjct: 184 TLSRVSNVLLPLPADEGRRPSRVMIPADCFEILGSSVDDHTYEILNASAAKIFGSDAVDN 243
Query: 270 ENLGEYFDSKVPSLKGFHKTNGE------------LKNVMRLIQRYEFKNNHNEWIESVK 317
NLG++ S +PS+ F + + +VMR +QR EFK NH EW+ +VK
Sbjct: 244 RNLGDFVSSNIPSIGKFMSSAASVDEATCVPALSAISHVMRCLQRSEFKANHAEWVNTVK 303
Query: 318 PALDPDISAEIGEML-EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG 376
P L I + E + E V+E+ ++R E ++A+++LLK++GIL PT PPKL
Sbjct: 304 PNLGLGIRERVEEAIASADEPVMEDLHAVRTEFKTALAALLKENGILAIPTVPGAPPKLR 363
Query: 377 GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQN 436
+ + E++++RAFSLLSIA +SG CQV++PLG D P SVS +ARHG D FL+ Q
Sbjct: 364 MEAVKLENFRSRAFSLLSIAGLSGFCQVSIPLGTRDGVPVSVSLLARHGADHFLIGVAQE 423
Query: 437 MYASLQEQA 445
+Y SL+++A
Sbjct: 424 LYDSLRDEA 432
>gi|148909975|gb|ABR18072.1| unknown [Picea sitchensis]
Length = 274
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/272 (65%), Positives = 218/272 (80%)
Query: 308 NHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPT 367
NH EWI SVKP L P ISA + LE + I +C ++E R A+++LLKDD IL PT
Sbjct: 2 NHEEWINSVKPDLGPGISARVRAALETNNENIGHCLKAKDEAREALNALLKDDAILFIPT 61
Query: 368 TAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGD 427
T P PKL K+ L +D+ RAF+LLSIA +SGCCQV++P+G +DKCP +VS +ARHGGD
Sbjct: 62 TPGPAPKLNMKQNLLDDFHIRAFTLLSIAGMSGCCQVSIPVGQHDKCPLAVSLMARHGGD 121
Query: 428 RFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFY 487
RFLLDTV+ MY +LQE+ IA+ ++ +T+ + ++A+IAKEKGN AYKDKQW KAI+FY
Sbjct: 122 RFLLDTVRAMYPTLQEEVKIASSTQPTTSVNGKIEAADIAKEKGNAAYKDKQWQKAINFY 181
Query: 488 TEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGY 547
+EAIKLNG NATYYSNRAAAYLE GSF QAE DCT AI+LDKKNVKA+LRRGTAREMLGY
Sbjct: 182 SEAIKLNGKNATYYSNRAAAYLELGSFAQAEEDCTAAIDLDKKNVKAHLRRGTAREMLGY 241
Query: 548 YKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
YKEAIEDF YALVLEPTNK A+L+A+RLRK+F
Sbjct: 242 YKEAIEDFQYALVLEPTNKAANLAANRLRKLF 273
>gi|297602073|ref|NP_001052054.2| Os04g0117800 [Oryza sativa Japonica Group]
gi|116308868|emb|CAH66004.1| H0613H07.2 [Oryza sativa Indica Group]
gi|125547022|gb|EAY92844.1| hypothetical protein OsI_14645 [Oryza sativa Indica Group]
gi|125589165|gb|EAZ29515.1| hypothetical protein OsJ_13589 [Oryza sativa Japonica Group]
gi|215769387|dbj|BAH01616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675132|dbj|BAF13968.2| Os04g0117800 [Oryza sativa Japonica Group]
Length = 434
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 270/430 (62%), Gaps = 16/430 (3%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
+ +DFGAF+E+ + PP P P PL GL+FA+ D+FDI G VTGFG+P+WARTH+
Sbjct: 1 MAEDFGAFMERF--VLPPPPPPSSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAP 58
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
A+ TS VV + GAT +G T++DE AYSI G N HY TP NP AP ++PGGSSSG+AV
Sbjct: 59 AAATSPVVLAALAAGATSLGTTIMDEMAYSIYGENAHYGTPANPCAPGRVPGGSSSGSAV 118
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AVAA+LVDFSLG DT G VRVP+A+CGI G R S+G VS +IP++ DTVGWFARD
Sbjct: 119 AVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRTSHGLVSAQNVIPMAQMFDTVGWFARDL 178
Query: 210 KILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKH 269
L V VLL LP + P + I DCF++L P D Q+V S K FG + +
Sbjct: 179 STLSRVTKVLLPLPDDTVKHPTHVTIPMDCFQILGSPDDHTYQIVNASVAKKFGSHAIDN 238
Query: 270 ENLGEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKP 318
NLG++ VPS+ F E + +VM + R +FK NH EW+ SVKP
Sbjct: 239 ANLGDFVSDNVPSIGKFIADFSESELPSVPALSVISHVMFSLLRSQFKANHAEWVNSVKP 298
Query: 319 ALDPDISAEI-GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGG 377
L P + I G + + +E ++R E +SA+++LLKD GIL PT PPP +G
Sbjct: 299 NLGPGLRENIHGAVASGDDEPLEEFLAVRAEFKSALAALLKDHGILAIPTVPGPPPMVGI 358
Query: 378 KEMLS--EDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
+ + ++YQ RAFSLL IA VSG CQV++PLG + P SVS +ARHG D FLL+ +
Sbjct: 359 QAQAAPLDNYQARAFSLLDIAVVSGFCQVSIPLGKRNGLPVSVSLVARHGADHFLLNVAE 418
Query: 436 NMYASLQEQA 445
+Y +L ++A
Sbjct: 419 ELYQTLIDEA 428
>gi|222628276|gb|EEE60408.1| hypothetical protein OsJ_13590 [Oryza sativa Japonica Group]
Length = 416
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/427 (46%), Positives = 265/427 (62%), Gaps = 36/427 (8%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
+ D+GAF+E+ L PP PL GL+FA+ D+FDI G VTGFG+P+WARTH+ A
Sbjct: 8 RGDYGAFMERFVLP-----PPPSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPA 62
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ TS VV +ING N HY TPTNP AP ++PGGSSSG+AVA
Sbjct: 63 AATSPVVLA-------------------AINGENTHYGTPTNPCAPGRVPGGSSSGSAVA 103
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VAA+LVDFSLG DT G VRVP+A+CGI G RPS+G VS +IP++ DTVGWF+RD
Sbjct: 104 VAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLS 163
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHE 270
L V VLL LP + P Q+ I DCF++L DR Q++ S K F Q+L +
Sbjct: 164 TLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLDDRTYQIINASVAKRFDSQILDNR 223
Query: 271 NLGEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKPA 319
NLG++ VPS+ F E + +VMR +QR +FK NH EW+ +VKP
Sbjct: 224 NLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPN 283
Query: 320 LDPDISAEIGEMLEISET-VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGK 378
L P + I E + + +E+ ++IR E +SA+++LLKD GIL PT PPPK+G +
Sbjct: 284 LGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGME 343
Query: 379 EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
E+++ RAFSLLSIA +SG CQV++PLG + P SVS +ARHG D FLL+ V+ +Y
Sbjct: 344 AAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELY 403
Query: 439 ASLQEQA 445
+L ++A
Sbjct: 404 QTLIDEA 410
>gi|414872364|tpg|DAA50921.1| TPA: toc64 isoform 1 [Zea mays]
gi|414872365|tpg|DAA50922.1| TPA: toc64 isoform 2 [Zea mays]
Length = 281
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/280 (61%), Positives = 218/280 (77%), Gaps = 3/280 (1%)
Query: 300 IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKD 359
+ + EFK+ H EWI SVKPA+D I + ++ E ++ I+ C+++R E RSA+S LLKD
Sbjct: 4 LHKQEFKDKHMEWINSVKPAVDARI---VSDLSEDGDSDIDGCQNVRKEARSALSGLLKD 60
Query: 360 DGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVS 419
DGILV PT PPKL KE+ SE Y ++ LLS+AS+SGCCQV++PLG +DKCP SVS
Sbjct: 61 DGILVIPTALGCPPKLNAKELSSESYNSQTLRLLSLASMSGCCQVSIPLGTHDKCPISVS 120
Query: 420 FIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQ 479
IARHGGDRFLLDT Q MY ++QEQ +I KS +S+ +++AE AKEKGN A+K+KQ
Sbjct: 121 LIARHGGDRFLLDTTQTMYTTIQEQVEILAKSSVSSKQAMNEEAAEAAKEKGNAAFKEKQ 180
Query: 480 WLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRG 539
W KA++FYTEAIKLNG ATYYSNRAAA+LE S+ QAEADCT AI LD K+VKAYLRRG
Sbjct: 181 WQKAVNFYTEAIKLNGKVATYYSNRAAAFLELTSYRQAEADCTSAIELDSKSVKAYLRRG 240
Query: 540 TAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
TAREMLGYYKEA++DF++ALVLEP NK A ++ +RL+K+F
Sbjct: 241 TAREMLGYYKEAVDDFNHALVLEPMNKTAGVAINRLKKLF 280
>gi|308809489|ref|XP_003082054.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri]
gi|116060521|emb|CAL55857.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri]
Length = 612
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 207/561 (36%), Positives = 298/561 (53%), Gaps = 22/561 (3%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA-S 91
+ GAF+E + + + PL G+ FAV D+FD+ G GFG P + T
Sbjct: 48 ELGAFVESER----DATMDGRESGPLRGMKFAVKDIFDVRGRRCGFGSPAFEATAGETPK 103
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
R + V ++ GA+ IG T +DE AY++NG N HY TP NP A + +PGGSSSG+AVA
Sbjct: 104 RNAECVDDVLNAGASAIGMTTMDELAYAVNGENPHYRTPINPRARNLIPGGSSSGSAVAC 163
Query: 152 AADL--VDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
A L DF+LG DT G VR+P+++CG+ G R S+G VS G+ ++ S DTVGWFAR
Sbjct: 164 AGALRGCDFALGTDTGGSVRIPASYCGVFGIRTSHGLVSMRGVQALAPSFDTVGWFARSI 223
Query: 210 KILRHVGHVLLQLPFAAQRSPRQ----IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQ 265
+LR VG VLL P A + +P + ++ D + P + V + R
Sbjct: 224 DVLRRVGDVLL--PSADEHAPTKPSAWYLLEDSVSDKRSSPHAQCAAVAAVAALNEIDRG 281
Query: 266 VLKHENLGEYFDSKVP---SLKGFHKTNGE--LKNVMRLIQRYEFKNNHNEWIESVKPAL 320
+ NL E+ P +L G + G L+ V+R+ E N W + +P L
Sbjct: 282 KFRRMNLTEHLLVGCPKFQALVGRREDCGLDCLREVLRVTMGAEIWENLGPWYKKEQPVL 341
Query: 321 DPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
DP + + ++S T +E K IR E+R + LL + +LV PTT P+ G E
Sbjct: 342 DPAVEGRLEAAAKLSPTQVELFKEIREEVRETMDRLLDNGVVLVLPTTPGKAPERGLGEK 401
Query: 381 LSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD-KCPTSVSFIARHGGDRFLLDTVQNMYA 439
+E+++ + F L IAS+ G QV++PL + + P +S I + DR L+D +++
Sbjct: 402 ATEEWRKKCFELTCIASLCGLPQVSIPLIAPNVEGPQGLSLIGGYQTDRMLMDAARDLVV 461
Query: 440 SLQEQ-ADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNA 498
L + DI L N + AE K KGN+A K ++ AI +Y AI N N
Sbjct: 462 ELVDAYPDILEAELLRLNPPREPGDAE--KAKGNEALKKGKYQDAIEYYGVAIGKNPKNP 519
Query: 499 TYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYA 558
Y +NRA A+L+ G++ E DCT AI LD+K KAYLRR TAR + G Y EA+ DF A
Sbjct: 520 VYVANRAMAHLKLGNYELCEDDCTTAIKLDRKYTKAYLRRATARSVGGNYLEALMDFEEA 579
Query: 559 LVLEPTNKRASLSADRLRKVF 579
L LEP N A +R++K+
Sbjct: 580 LRLEPNNSDAKREVNRMKKII 600
>gi|223973013|gb|ACN30694.1| unknown [Zea mays]
Length = 292
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/266 (63%), Positives = 216/266 (81%), Gaps = 2/266 (0%)
Query: 1 MASQ--SANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPL 58
MAS +ANLWVLLGLG+AG+LL ++L++ + D GAF+ +L+LLPPPQP PP+APHPL
Sbjct: 1 MASSGAAANLWVLLGLGIAGVLLAARRLRRPARPDHGAFVARLELLPPPQPPPPQAPHPL 60
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
TGL FA++D + GY+T FG EWA+TH+A TS+VVS LV+GGA C+GKTV+DE AY
Sbjct: 61 TGLCFAIADALHVSGYITSFGSLEWAKTHNAEVLTSSVVSALVDGGAICVGKTVIDEMAY 120
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
SI+G N+++DTPTNPAAP ++PGG SSG+AVAVA +VDF+LGID++GGVR+P A+CG+L
Sbjct: 121 SIHGENRYFDTPTNPAAPDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRIPGAYCGVL 180
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
FRPS+ VS+ G+IP++ SLDT+GWFA+DP +L VGH+LL+LP+A R PR IADD
Sbjct: 181 AFRPSHAVVSNSGVIPVAPSLDTIGWFAKDPSVLHRVGHLLLRLPYAGIRQPRIFYIADD 240
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGR 264
CFEL KIPA R+ QVV KS EKLFGR
Sbjct: 241 CFELSKIPARRLTQVVTKSVEKLFGR 266
>gi|168031234|ref|XP_001768126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680564|gb|EDQ66999.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 239/396 (60%), Gaps = 19/396 (4%)
Query: 69 FDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYD 128
+D+E VTGFG +W +TH+ A++T+ + ++++ GA GK +D+F S+ G N
Sbjct: 4 YDVESVVTGFGSYDWEQTHAPATQTAVAIDSVIKAGAVSTGKQTMDDFGLSMFGRNWRDG 63
Query: 129 TPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVS 188
NP AP GG++SG+ VAVA++ VDF+L ID++GGVR+P+AFCGI G+R S+G +S
Sbjct: 64 PAENPVAPKHFSGGAASGSGVAVASNAVDFALAIDSIGGVRIPAAFCGIFGYRASHGVIS 123
Query: 189 HMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPAD 248
G+ ++ SLD VG F+RDP +L V VLL+ P SP +++IADDCF L I +
Sbjct: 124 TAGVTAVAPSLDVVGVFSRDPYVLHQVVKVLLKQPELEWGSPAEVLIADDCFGLSTISSV 183
Query: 249 RVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--------------HKTNGELK 294
R ++ ++ GR ++ H NLG + S VP+L+ F + T L+
Sbjct: 184 RTADLLARAVSDTIGRSLIHHVNLGTHIASNVPTLRNFLMEEERLLQQDTSRYSTYDGLR 243
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIG-EMLEISETVIENCKSIRNEMRSAI 353
+ M LI R EFK H +W E V P L PD+ + M + + +++E R+A+
Sbjct: 244 DAMILILREEFKEKHRKWFEDVNPELAPDVDVRVKFAMAPHLDGLHRLALKVKDETRAAM 303
Query: 354 SSLLKDDGILVTPTT-AYPPPKLG-GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ LL D +LV P+T + PP K GKE+ E +++RA S+LSIAS+SGCCQVTVP+G
Sbjct: 304 NELLLTDTLLVIPSTPSLPPSKAARGKEL--EFFESRALSILSIASMSGCCQVTVPIGDV 361
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADI 447
P SVS +AR GGD FLLD++ + LQ + D+
Sbjct: 362 RGIPISVSLMARCGGDLFLLDSLIKLNPKLQLEVDV 397
>gi|168042567|ref|XP_001773759.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674874|gb|EDQ61376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 402
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 236/396 (59%), Gaps = 19/396 (4%)
Query: 69 FDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYD 128
FD+E +TGFG +W +TH+ A++T+ + +++ GA C GK +DEF S+ G NK
Sbjct: 4 FDVESAITGFGSQDWEQTHAPATQTAVAIGRILQSGAACTGKQTMDEFGLSMFGRNKRDG 63
Query: 129 TPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVS 188
NP P GG++SG+ VAVA++ DF+L +DT+GGVR P++FCGI G+R S+ A+S
Sbjct: 64 IAENPVVPKYFAGGAASGSGVAVASNTCDFALALDTIGGVRNPASFCGIFGYRASHEAIS 123
Query: 189 HMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPAD 248
+G+ P+S SLD VG +RD +L V +LLQ P + P +++ADDCF I
Sbjct: 124 TVGVTPVSPSLDAVGVLSRDVHVLHQVVKLLLQQPDLERGLPSSVLVADDCFSQSSISTV 183
Query: 249 RVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--------------HKTNGELK 294
R ++ ++ + GR ++ H NLG S VP+L+ F + T L+
Sbjct: 184 RTADLIARAVSETLGRSLVHHVNLGALIASSVPTLRNFLMEEERLLKQDTSRYTTFDGLR 243
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIG-EMLEISETVIENCKSIRNEMRSAI 353
+ M LI RY+F++ H +W + V P L D+ + M + + + I+ E R+A+
Sbjct: 244 DAMLLILRYKFRDKHRKWFKDVDPELSSDVDVRVKFAMAPYIDGLHKMALKIKEETRAAM 303
Query: 354 SSLLKDDGILVTPTTAYPPP--KLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ +L D +LV P+T PP + GKE+ E +++RA S+LS+AS+SGCCQVTVPLG
Sbjct: 304 NEILLMDSLLVMPSTPSLPPLKEAKGKEL--EIFESRALSMLSLASMSGCCQVTVPLGSA 361
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADI 447
P SVS +ARHGGD FLL+++ + A +Q + D+
Sbjct: 362 RGIPISVSVLARHGGDMFLLESLMELNARIQMEVDV 397
>gi|145352000|ref|XP_001420347.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580581|gb|ABO98640.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 576
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/549 (36%), Positives = 287/549 (52%), Gaps = 47/549 (8%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS-----RTSTVVSTLVEGGATCIGK 110
PL + F V D+FDIEG GFG P + RT R + V TL+E GA+ +G
Sbjct: 38 RPLKNVKFVVKDIFDIEGRRCGFGSPAFKRTGGKGGTAGAKRHARCVRTLLEAGASAVGM 97
Query: 111 TVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADL--VDFSLGIDTVGGV 168
T +DE AY+ING N HY TP NP A + +PGGSSSG+AVA AA L +F+LG DT G V
Sbjct: 98 TTMDELAYAINGENAHYGTPINPRARALVPGGSSSGSAVACAAALRGCEFALGTDTGGSV 157
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLP--FAA 226
RVP+++CG+ G R S+G+VS G+ ++ S DTVGWFAR +L+ VG VLL P A
Sbjct: 158 RVPASYCGVYGIRTSHGSVSMRGVQALAPSFDTVGWFARSIDVLQRVGDVLLPEPDKHAP 217
Query: 227 QRSPRQIIIADDCFE------LLKI-PADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSK 279
R +++ D C L +I PAD K NL E+
Sbjct: 218 TEPSRWLLLEDACAAVAAVTALHEIAPAD------------------FKRMNLTEHLLVG 259
Query: 280 VPSLKGFHKTNGE-------LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML 332
P + NG L+ ++R++ E N +W KP L + A +
Sbjct: 260 CPKFRSL--VNGREDYGLDCLREMVRVLMGAEIWENLGKWYTEEKPKLGAAVKARMEAAS 317
Query: 333 EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSL 392
++ +E K +R E+R + +L I + PTT PK G + +E ++ + F L
Sbjct: 318 KLDADEVERLKEVREEVREEVDRILDGGAIFILPTTPGKAPKRGQSDQATESWRRKCFEL 377
Query: 393 LSIASVSGCCQVTVPLGYYD-KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKS 451
L IAS+ G QV++PL + + P +S IA + D+ L+ + + +L E ++
Sbjct: 378 LCIASLCGLPQVSIPLEAPNIEGPQGLSLIAGYQMDKMLIGAARQIVPALVEAYPDILEA 437
Query: 452 KLSTNTFNQKQS-AEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLE 510
+L N ++ E K KGN+A K ++ AI +Y+ AI N + + +NRA A+L+
Sbjct: 438 EL--ERLNPPEAPGESEKTKGNEALKQGKYQDAIEYYSVAIGKNPKSKIFVANRAMAHLK 495
Query: 511 SGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASL 570
G++ AE DCT+AI LD + VKAYLRR AR + G Y EA+ D+ AL EP N A
Sbjct: 496 LGNYQLAEDDCTEAIKLDARYVKAYLRRAAARSVAGNYLEALMDYEEALRFEPNNSDAKR 555
Query: 571 SADRLRKVF 579
R++K+
Sbjct: 556 EVYRMKKII 564
>gi|449534001|ref|XP_004173958.1| PREDICTED: outer envelope protein 64, mitochondrial-like, partial
[Cucumis sativus]
Length = 269
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 140/259 (54%), Positives = 180/259 (69%)
Query: 43 LLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVE 102
L P PQP PP A L GL+FAV D+FD++ YVTGFG+P+W RTH A +T +V+ L++
Sbjct: 1 LRPFPQPSPPAARQSLAGLTFAVKDVFDVKDYVTGFGNPDWKRTHDVAEKTDEMVTLLLK 60
Query: 103 GGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGI 162
GA C+GKTV+DE + I G NK Y TPTNP S +PGGSSSG+AVAVA +LVDF+LG
Sbjct: 61 NGAACVGKTVMDELGFGITGENKQYGTPTNPKLSSFVPGGSSSGSAVAVAGELVDFALGT 120
Query: 163 DTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL 222
DTVG +R+P++FCGI FRPS+G + ++ S SLDTVGWFARDP L VGHVLL+L
Sbjct: 121 DTVGCIRIPASFCGIFAFRPSHGVIPMNRVLSNSPSLDTVGWFARDPSTLHRVGHVLLKL 180
Query: 223 PFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS 282
R R+++IADD F+L K+P + V VV K+ E L G Q KH N GEY S VPS
Sbjct: 181 NSVEPRRMRRLVIADDLFQLSKVPLQKTVHVVEKAIENLSGYQSPKHMNFGEYLASNVPS 240
Query: 283 LKGFHKTNGELKNVMRLIQ 301
LKGFH + L+ + +++
Sbjct: 241 LKGFHNQSPTLQKGITILK 259
>gi|412987786|emb|CCO19182.1| amidase [Bathycoccus prasinos]
Length = 669
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 202/613 (32%), Positives = 300/613 (48%), Gaps = 69/613 (11%)
Query: 27 KKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGY------VTGFGH 80
KK +K D GAF+E + +P P P L L F + D+F++ G GFG
Sbjct: 41 KKKVK-DCGAFVEIVD-IPCPPPPEKHVVRKLANLKFVLKDIFEVSGRKGENDSSCGFGS 98
Query: 81 PEWARTHSAAS---------------RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNK 125
P+W + + ++ L++ GA+ +G T +DE AYSI+G N+
Sbjct: 99 PKWKEFMKEKRENSNSNGNNAGVHRVKNAAIMDMLLKNGASLVGITHMDELAYSIDGQNE 158
Query: 126 HYDTPTNPAAPSQMPGGSSSGAAVAVAADL--VDFSLGIDTVGGVRVPSAFCGILGFRPS 183
HY TP NPAA ++PGGSSSG+AVAVA+ L DF +G D+ G VRVP+A+CG+ GFRPS
Sbjct: 159 HYGTPINPAADKRLPGGSSSGSAVAVASRLRDCDFGIGTDSAGSVRVPAAYCGVYGFRPS 218
Query: 184 YGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ---RSPRQIIIADDCF 240
+G VS G + + DTVGWFA+ K L+ VG VLL+ + + P+Q I D
Sbjct: 219 HGMVSTKGCQDFAKTFDTVGWFAKGSKTLKDVGDVLLKPADDEKYGIKEPKQFAILTDLM 278
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQ-----VLKHENLGEYFDSKVPSLK--GFHKTNGEL 293
+L AD + S K FG + +LGE PSL+ KT EL
Sbjct: 279 KL----ADPQGSAAVASALKAFGYDDRYAGKVSKLDLGERLKMLCPSLRTDTSGKTGLEL 334
Query: 294 -KNVMRLIQRYEFKNNHNEWIESVKPALDPD--------------------------ISA 326
++ M +E E++ ++ D +
Sbjct: 335 IRDKMHATMGFEIHEALKEFLAFLEKQDGSDQATATATATISNKTTTTTTTSGLGKFTAQ 394
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTT-AYPPPKLGGKEMLSEDY 385
I +I+E EN +R E+R + ++ + +L+ PT P + G E + +
Sbjct: 395 RIENAKKITEQDYENLMKVRGEIREVMDQIMDNGTVLIFPTVPGVAPMREGRSEEEVQAW 454
Query: 386 QNRAFSLLSIASVSGCCQVTVPLGYYD-KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+ + F L+IAS G QV +PL Y D + P SVS + D+ LL+ A +QE
Sbjct: 455 RMKTFQFLAIASFCGLPQVAIPLRYPDAEGPHSVSLLGGFQTDKMLLECAFRYSAQMQEH 514
Query: 445 ADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNR 504
+++ + K E K GN+A+ + ++ AIS+Y +A++ A YY+NR
Sbjct: 515 FPNYVITEMMKSNPAPKVPGEEEKVNGNKAFAEGKYEDAISWYDKALEKKKLPA-YYANR 573
Query: 505 AAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPT 564
A YL+ G + E DCT+A+ +D K VKAYLRR AR +LG + EA D+ AL LEPT
Sbjct: 574 ALVYLKMGKMEEVEKDCTEALEMDGKYVKAYLRRAKARMILGSFLEAAMDYEEALRLEPT 633
Query: 565 NKRASLSADRLRK 577
N+ A ++K
Sbjct: 634 NREARSEMANMQK 646
>gi|38344119|emb|CAE01726.2| OSJNBb0050O03.16 [Oryza sativa Japonica Group]
Length = 345
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/341 (46%), Positives = 211/341 (61%), Gaps = 14/341 (4%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
+ +DFGAF+E+ + PP P P PL GL+FA+ D+FDI G VTGFG+P+WARTH+
Sbjct: 1 MAEDFGAFMERF--VLPPPPPPSSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAP 58
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
A+ TS VV + GAT +G T++DE AYSI G N HY TP NP AP ++PGGSSSG+AV
Sbjct: 59 AAATSPVVLAALAAGATSLGTTIMDEMAYSIYGENAHYGTPANPCAPGRVPGGSSSGSAV 118
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AVAA+LVDFSLG DT G VRVP+A+CGI G R S+G VS +IP++ DTVGWFARD
Sbjct: 119 AVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRTSHGLVSAQNVIPMAQMFDTVGWFARDL 178
Query: 210 KILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKH 269
L V VLL LP + P + I DCF++L P D Q+V S K FG + +
Sbjct: 179 STLSRVTKVLLPLPDDTVKHPTHVTIPMDCFQILGSPDDHTYQIVNASVAKKFGSHAIDN 238
Query: 270 ENLGEYFDSKVPSLKGFHKTNGE-----------LKNVMRLIQRYEFKNNHNEWIESVKP 318
NLG++ VPS+ F E + +VM + R +FK NH EW+ SVKP
Sbjct: 239 ANLGDFVSDNVPSIGKFIADFSESELPSVPALSVISHVMFSLLRSQFKANHAEWVNSVKP 298
Query: 319 ALDPDISAEI-GEMLEISETVIENCKSIRNEMRSAISSLLK 358
L P + I G + + +E ++R E +SA+++LLK
Sbjct: 299 NLGPGLRENIHGAVASGDDEPLEEFLAVRAEFKSALAALLK 339
>gi|317127613|ref|YP_004093895.1| amidase [Bacillus cellulosilyticus DSM 2522]
gi|315472561|gb|ADU29164.1| Amidase [Bacillus cellulosilyticus DSM 2522]
Length = 390
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 145/382 (37%), Positives = 214/382 (56%), Gaps = 20/382 (5%)
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
+FAV D+FDI+G G+P+W ++H A+ + VV L+ GA +G T+ DE YS+N
Sbjct: 24 TFAVKDVFDIKGIPASAGNPDWLKSHEPANSNAPVVEQLLAEGAALLGTTITDELMYSLN 83
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFR 181
G N HY TP NP +++PGGSSSG+AVAVAA++VDFSLG DT G +R+P+A+CG GFR
Sbjct: 84 GENMHYGTPVNPVEHTRVPGGSSSGSAVAVAANMVDFSLGTDTGGSIRIPAAYCGNFGFR 143
Query: 182 PSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFE 241
P++G+V G IP+++S DTVGW +DP +L VG V+++ ++ + + +DC+E
Sbjct: 144 PTHGSVRIDGAIPLASSFDTVGWMTKDPALLHLVGQVIVKGDEHRNQAFDHVFLGEDCWE 203
Query: 242 LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG--ELKNVMRL 299
L+ ++ + Y +S++ + G G E NV R
Sbjct: 204 LVSKGMVHALKPYV------------------HYVESELTATTGNVAKEGLMEWSNVFRT 245
Query: 300 IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKD 359
+Q E H EWIE V+P PDI A + ++ E + +R E+ A+ LL D
Sbjct: 246 LQGLEIWKTHGEWIEKVQPEFAPDIRARFQWASALDPSLKEPNERMREEITEAMQQLLGD 305
Query: 360 DGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVS 419
IL+ PTT PKL E ED + + L IA ++ QVT+PLG+ D PTS+S
Sbjct: 306 HTILLIPTTPDIAPKLHLSENELEDRRTKTMQLTCIAGLAKLPQVTLPLGHTDGIPTSLS 365
Query: 420 FIARHGGDRFLLDTVQNMYASL 441
+A G D LL V+ + +L
Sbjct: 366 VVAGQGMDLPLLKWVKKHWPAL 387
>gi|2342685|gb|AAB70409.1| Contains similarity to Rhodococcus amidase (gb|D16207). ESTs
gb|T20504,gb|H36650,gb|N97423,gb|H36595 come from this
gene [Arabidopsis thaliana]
Length = 273
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 185/274 (67%), Gaps = 14/274 (5%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
DFGAFIEK+ + +P L GL+FA+ D+FD+EG VTGFG+P+W RTHSAA
Sbjct: 4 NNDFGAFIEKVTIS---PTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAA 60
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ T+ VVS+L+E GAT +G T++DE AYSING N HY TP NP A ++PGGSSSG+AVA
Sbjct: 61 TSTAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVA 120
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VAA LVDFS+G DT G VRVP+++CGI GFRPS+GAVS +G+ P++ S DTVGWFARD
Sbjct: 121 VAARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTA 180
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHE 270
L+ VG VLLQ P Q+IIADDCF+L +P D +VQ + + K F + +
Sbjct: 181 TLKRVGCVLLQQHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLNVPSLKHF----MTSD 236
Query: 271 NLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYE 304
++ + +PSL L + MRL+QRY
Sbjct: 237 DVTTQQEFCIPSLMA-------LSSSMRLLQRYN 263
>gi|255086029|ref|XP_002508981.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226524259|gb|ACO70239.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 582
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 269/541 (49%), Gaps = 41/541 (7%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
L A PL G+ F++ D+FD++G VT G P WA TH+ A+R + V++L GA CIG
Sbjct: 48 LKGNAKGPLRGIRFSIQDVFDVQGRVTSLGSPAWAATHAPATRDAPAVASLRAAGADCIG 107
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA--DLVDFSLGIDTVGG 167
T +DE SI G + P NP A ++PGGSSSGAAV+VA VD +L +D+ GG
Sbjct: 108 VTRMDELGCSITGCDAVDGAPINPVARDKIPGGSSSGAAVSVAGAPKEVDMALAVDSSGG 167
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
VRV +A CG+ R ++G V+ G + SL GW +RDP ++ L+ LP Q
Sbjct: 168 VRVSAAHCGLYAIRTTHGTVALDGASSTTGSLAAAGWMSRDPDVIAATATALIPLP-KDQ 226
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH 287
S ++++ +D +L A V + F + NLG++ PSL+
Sbjct: 227 ISVSRVMVLEDAIDLCDDIASCGVATACMLLKDAFKNGGISRLNLGKHLLMACPSLREMQ 286
Query: 288 KTNGE-----LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML----EISETV 338
+ L+N +RLI+ E + W + K P+ A+ E L +I+
Sbjct: 287 NKDCATGLDVLRNCLRLIEGEEVWSQIGGWYSAEK----PETGAKAKEYLLGASKIATDS 342
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASV 398
+ K R E+R+A+ LL + + PTT PP + + ++ + L ++S+
Sbjct: 343 LRVIKQAREEVRAAVDLLLDGVTVFLLPTTPCAPPPMNAGAEATATWERKVLQLTCLSSL 402
Query: 399 SGCCQVTVPLGYYD-KCPTSVSFIARHGGDRFLLDTVQNMYASLQE------QADIATKS 451
+G Q+T+PL Y + P +S +A D ++ + A L+E QA++ T+
Sbjct: 403 TGTPQLTIPLTYEQAEGPYGLSVVAGRKQDYMCIEFARMFGAQLREAFPDVVQAEL-TRL 461
Query: 452 KLSTNTFNQKQSA-----EIAKEKGNQAYKDKQWLKAISFYTEAIKLNGN---------- 496
K N A E K +GN+ +K + +AI YTEA+ G
Sbjct: 462 KDEENGGKDDSDAVPSMCEELKAQGNKEFKAGNFNEAIVKYTEALTALGPPPNMRPDPHR 521
Query: 497 --NATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIED 554
+ SNRA L+ G + AE DCT A+ L++KNVKAYLRRG AR + G Y EAI+D
Sbjct: 522 AWKSVVLSNRAMTNLKLGVYNDAEDDCTAALKLNEKNVKAYLRRGAARSVSGNYLEAIDD 581
Query: 555 F 555
F
Sbjct: 582 F 582
>gi|452991628|emb|CCQ97050.1| Amidase 1 [Clostridium ultunense Esp]
Length = 401
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/415 (37%), Positives = 223/415 (53%), Gaps = 22/415 (5%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
D+ AF+++ ++ P + L GL+FAV D+F I+GY G G+P+W RTH A +
Sbjct: 4 DWNAFVQEDVIIEPYKD------GRLRGLTFAVKDVFAIKGYTNGAGNPDWLRTHKPAEK 57
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
+ VV L+ GA G T DE +S+NG N HY TP NP AP +PGGSSSG+AVAVA
Sbjct: 58 NAVVVDLLLAQGARLKGITHTDELMFSLNGENYHYGTPINPKAPGCIPGGSSSGSAVAVA 117
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
+ VDF+LG DT G VR+PSA+CGI GFRP++G+V G+IP++ S DTVGW ARD K L
Sbjct: 118 SGSVDFALGTDTGGSVRIPSAYCGIYGFRPTHGSVPLDGVIPLAQSFDTVGWMARDAKTL 177
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
VG L + +QI+ D +E+++ + K F + + E +
Sbjct: 178 LRVGEALFDGMEDTEGEFQQILFGRDAWEMVE-----------EDCRKSFFKSIPLFERM 226
Query: 273 GEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML 332
E + + +G EL R IQ YE +NH +WI P PDI+
Sbjct: 227 TEKNEWITVAPQGLP----ELFKTFRTIQGYEIWSNHGKWIRDENPRFGPDIAERFAWTS 282
Query: 333 EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSL 392
+S++ E + ++ + RS + LL + +LV PT++ PPK G ED + R L
Sbjct: 283 TLSDSEYEKARPLQEQFRSYMHELLGSNRLLVIPTSSCTPPKRGLTGDQVEDRRTRTLQL 342
Query: 393 LSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY-ASLQEQAD 446
IA +S QVT+P+ + P +S IA + D LL V + A L E+ +
Sbjct: 343 TCIAGLSELPQVTLPMEDEEGLPFGISIIAGYRQDLKLLSWVHEKWSAPLTEKGE 397
>gi|374324241|ref|YP_005077370.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Paenibacillus terrae
HPL-003]
gi|357203250|gb|AET61147.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Paenibacillus terrae
HPL-003]
Length = 391
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 207/392 (52%), Gaps = 18/392 (4%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P L+GLSF V D+F + G G+P W +TH A+ + +S L++ GA G T
Sbjct: 16 PTGQGTLSGLSFMVKDVFAVRDNTNGAGNPCWLQTHGPAAEHAETLSLLLQQGARLTGTT 75
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
DE +S+NG N HY TP NP AP ++PGGSSSG+AVAVAA L DF+LG DT G VRVP
Sbjct: 76 HTDELMFSLNGENVHYGTPVNPKAPDRIPGGSSSGSAVAVAAGLADFALGTDTGGSVRVP 135
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP- 230
S++CG+ G RP+ G VS G+IP++ S DTVGW ARDP+ L VG VL LP A S
Sbjct: 136 SSYCGVYGMRPTQGIVSENGVIPLAPSFDTVGWMARDPETLCRVGKVL--LPQTASGSGF 193
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
+++I +D +EL AD + + S +L HE + +P
Sbjct: 194 SRVLIGEDAWEL----ADTESKDALASCLELLCGLAESHEAV-RIAPQGLP--------- 239
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
E + R IQ YE H WIE +P PDI+ I E R E+R
Sbjct: 240 -EWMAMFRTIQGYEIWQEHGAWIEREQPVFGPDIAGRFSWAGTIERADQEKEVERRLEVR 298
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
++ LL D +LV PTT PKLG L E+ + + L IA +SG Q+T+P
Sbjct: 299 KHMADLLGTDAVLVIPTTTGVAPKLGLNGPLIEERRVQTMRLTCIAGLSGLPQLTIPAAE 358
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
CP +S I G DR LL+ ++ +++
Sbjct: 359 VLGCPVGISLIVGPGQDRRLLEWAASLVPAVK 390
>gi|56965491|ref|YP_177224.1| amidase [Bacillus clausii KSM-K16]
gi|56911736|dbj|BAD66263.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 388
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 207/383 (54%), Gaps = 23/383 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G +FAV D+F ++GY G+P+W +T A S ++ L+ GA G V DE
Sbjct: 23 LAGKTFAVKDVFAVKGYTNSAGNPDWLKTAQPADADSPSIAKLLAAGADLRGMAVTDELM 82
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP NP ++PGGSSSG+AVAVAA+L DF++G DT G +R+PS++CGI
Sbjct: 83 YSLNGENVHYGTPVNPYGADRVPGGSSSGSAVAVAAELTDFAIGTDTGGSIRIPSSYCGI 142
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
GFRPS+GAV G+IP++ S DTVGW ARD ++L+ +G VLL + + Q++I +
Sbjct: 143 YGFRPSHGAVDISGVIPLAESFDTVGWMARDVELLKDIGTVLLGDQTVEEEAGEQLLIDE 202
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLK--HENLGEYFDSKVPSLKGFHKTNGELKN 295
L+ I V +V+++ ++L + + + + + E F++
Sbjct: 203 ---ALVGIAEPNVQALVLQAADRLGAKPISRWTSDRIDEGFET----------------- 242
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R +Q E H EW+++ KPA DI A + + + K + M+ A ++
Sbjct: 243 -FRHLQAREIWRQHGEWVQAAKPAFAADIGARFQWASTLPQQELPLYKDKQTAMKRAFAA 301
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
+ I++ PT A P PK GG E + + L SIA ++GC Q+T+P + P
Sbjct: 302 DFAPNDIVLLPTAAGPAPKRGGSGQELEAIRAKTMKLTSIAGLAGCPQITIPFASVEGLP 361
Query: 416 TSVSFIARHGGDRFLLDTVQNMY 438
+S I G D FLL ++
Sbjct: 362 IGLSAIGCPGQDLFLLSWANRLF 384
>gi|402300179|ref|ZP_10819713.1| amidase [Bacillus alcalophilus ATCC 27647]
gi|401724661|gb|EJS98002.1| amidase [Bacillus alcalophilus ATCC 27647]
Length = 396
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 214/401 (53%), Gaps = 32/401 (7%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P L+G SFAV D+FD++G VTG G+P+W +TH A+ + VV L+ GA +G T
Sbjct: 18 PNKKGALSGASFAVKDVFDVKGVVTGAGNPDWEQTHLPATTHAKVVEQLINQGAKLVGTT 77
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
DE +S+NG N HY TP NP AP ++PGGSSSG+AV VAA+LVDF++G DT G VR+P
Sbjct: 78 HTDELMFSLNGENVHYGTPVNPKAPERIPGGSSSGSAVVVAAELVDFAIGTDTGGSVRIP 137
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVG-HVLLQL----PFAA 226
S++CG+ G RP++GAVS G+IP++ DTVGW AR P++L VG H+L Q+ PF+
Sbjct: 138 SSYCGVFGIRPTHGAVSMNGVIPLARYYDTVGWMARTPELLYEVGTHLLDQVENTNPFSK 197
Query: 227 QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
P+ ++ D E LK P +V E F + +
Sbjct: 198 VIIPQDVLALVD--EKLKDPFANIV----------------------EQFQQSINQVDYI 233
Query: 287 HKTNGELKNVM---RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCK 343
G L+N + R +Q + +H WIE V P DI+ ++E E +
Sbjct: 234 TLAEGNLQNWLTTFRTLQGFGVWESHGNWIEKVNPNFGSDIAERFKWASTVTEEEAEEAR 293
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQ 403
R ++R + LL +D +++ PT P L + E +N+ + I+ ++G +
Sbjct: 294 LKREKIRQHVLELLGEDNVILMPTAPGVAPLLQTEGEGLEVQRNKTLQMTCISGLTGFPE 353
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
VT+PL + P +S IA G D LL+ V+N EQ
Sbjct: 354 VTLPLLNINGTPVGLSIIAGPGQDLRLLNWVKNNITQQSEQ 394
>gi|384249168|gb|EIE22650.1| amidase [Coccomyxa subellipsoidea C-169]
Length = 405
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 209/389 (53%), Gaps = 15/389 (3%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL GL+FA DL+D+E YVTGFG+P W TH A+ T+ V L+ GA+ +GKT +
Sbjct: 20 AEGPLQGLTFAAKDLYDVENYVTGFGNPTWKETHEPATATAPAVQALLSAGASLVGKTHM 79
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DE AYS+NG N HY TP NPA P ++PGGSSSG+ VAVA + VD +LG DT G VRVP++
Sbjct: 80 DELAYSLNGENFHYGTPVNPACPDRIPGGSSSGSVVAVANESVDIALGSDTGGSVRVPAS 139
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
+CG G RP++G VS G ++ S DT G+FAR+ ++LR G VLL + ++
Sbjct: 140 YCGAWGIRPTHGRVSLEGACTLAASYDTGGFFARNAELLRRAGDVLLDPATRSDVQFKRW 199
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP---SLKGFHKTN 290
++A D F+L AD ++E +F ++ L Y +P + K +
Sbjct: 200 LVAKDAFDL----ADDA------TSEAIFRVGLIDLVFLDSYHRFSLPVACTTKTASCSE 249
Query: 291 G-ELK-NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
G EL V R+ Q E EW++S +P L P +++ + +R
Sbjct: 250 GFELACCVFRVSQGAEVWEALGEWVQSAQPQLGPGTKERFEMASQLTTEEVARANELRAR 309
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+ + LL +DG+L P+ P P L + + ++ R SL IA +SG QV++P+
Sbjct: 310 ITQHLEQLLGEDGVLAVPSAPGPAPFLNTPQQDLDTFRKRLISLTCIAGLSGLPQVSLPV 369
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+ CP + I G D LL + +
Sbjct: 370 AKVEGCPVGLGLIGPRGSDEALLRLTEQL 398
>gi|384048378|ref|YP_005496395.1| peptidase M22, glycoprotease [Bacillus megaterium WSH-002]
gi|345446069|gb|AEN91086.1| Peptidase M22, glycoprotease [Bacillus megaterium WSH-002]
Length = 399
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 205/389 (52%), Gaps = 22/389 (5%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+PP L LSFA+ D+FD++G+++ G+P+W TH AS + VV+ L++ GA G
Sbjct: 15 VPPTGTGMLNNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVVAALLKEGAALKG 74
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
T DE Y +NG N HY TP NP + ++PGGSSSG+AVAVAA + DF++G DT G VR
Sbjct: 75 VTHTDELMYGLNGENAHYGTPVNPKSADRIPGGSSSGSAVAVAAGITDFAIGTDTGGSVR 134
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+PS++CGI G+RPS+G +S G+IP++ S DTVG ARD L+ VG VLL
Sbjct: 135 IPSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGSVLLNSTSLVSGF 194
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQ---VLKHENLGEYFDSKVPSLKGF 286
R + + D EL+ + + + IK K F V+ + Y ++
Sbjct: 195 TR-LYVPTDVMELVDEQSMQALAPPIKHVMKSFSTTEEIVIAPQGFSTYMET-------- 245
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
RL+Q E H EWI+ P DI + ++ + + R
Sbjct: 246 ----------FRLLQGKEIWQMHGEWIQKENPTFGDDIGSRFQWASTLTLLNMNYIEEKR 295
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
E+R + S L +DGILV PT+ P P K E+ + R + IA +SG QVT+
Sbjct: 296 RELRYFMYSQLGEDGILVLPTSPGPAPVKDAKGPELENRRLRTLQMTCIAGLSGLPQVTI 355
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
P G D P +SFIA + D LL+ V+
Sbjct: 356 PAGELDGLPIGLSFIAGYNQDEKLLNWVK 384
>gi|294497803|ref|YP_003561503.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
QM B1551]
gi|294347740|gb|ADE68069.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
QM B1551]
Length = 399
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 204/386 (52%), Gaps = 16/386 (4%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+PP L LSFA+ D+FD++G+++ G+P+W TH AS + VV+ L++ GA G
Sbjct: 15 VPPTGTGMLNNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVVAALLKEGAVLKG 74
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
T DE Y +NG N HY TP NP + ++PGGSSSG+AVAVAA + DF++G DT G VR
Sbjct: 75 VTHTDELMYGLNGENAHYGTPINPKSADRIPGGSSSGSAVAVAAGITDFAIGTDTGGSVR 134
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+PS++CGI G+RPS+G +S G+IP++ S DTVG ARD L+ VG VLL A
Sbjct: 135 IPSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGAVLLNSTSRASGF 194
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
R + + D EL+ + R + I + F + + +GF
Sbjct: 195 TR-LYVPTDVMELVDEQSMRALAPSINHVMESF-----------STIEEIAIAPQGFST- 241
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
RL+Q E H EWI+ P DI + ++ + + R E+
Sbjct: 242 ---YMETFRLLQGKEIWQTHGEWIQKENPTFGEDIGSRFQWASTLTLLNMNYIEEKRREL 298
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
R + S L ++GILV PT P P K + E+ + R + IA +SG QVT+P G
Sbjct: 299 RYFMYSQLGEEGILVLPTAPGPAPVKDTKGLELENRRLRTLQMTCIAGLSGLPQVTIPAG 358
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQ 435
D P +SFIA + D LL+ V+
Sbjct: 359 ELDGLPIGLSFIAGYSQDEKLLNWVK 384
>gi|402774032|ref|YP_006593569.1| amidase [Methylocystis sp. SC2]
gi|401776052|emb|CCJ08918.1| Amidase [Methylocystis sp. SC2]
Length = 391
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 205/387 (52%), Gaps = 20/387 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G SF V + D+ G V+ GHP+WA TH+ A R + VV L++ GA +G+T +DE A
Sbjct: 22 LSGASFVVKENIDVAGNVSTNGHPKWAATHAPAERDAPVVDRLLDAGARLVGRTQMDEMA 81
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ G N HY TP NPAA ++ PGGSSSG+AVAVAA LV+F++G DT G R P+AFCG+
Sbjct: 82 YSLLGANPHYGTPINPAAQNRHPGGSSSGSAVAVAAGLVNFAIGTDTAGSCRAPAAFCGV 141
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP-RQIIIA 236
GFR S+GAV+ GIIP++ S D +GWFARD ++ VG L LP A+ + ++ ++
Sbjct: 142 FGFRASHGAVAMDGIIPLAPSFDAIGWFARDIGVMASVGEAL--LPANAENAELKEAVLL 199
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D F + + + L + LG+ F F G +N
Sbjct: 200 TDAFSGVGM---DFASAAAGPVDALKTSGPWREATLGDDF---------FKTALGHFRN- 246
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
+Q +E +H WI + P + +I+ + ++ R++ R I +L
Sbjct: 247 ---MQAFEAWASHGAWISANSPTFGKGVEQRFAYAAKITPDQKKAAEAFRDDARKKIDAL 303
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L G LV+PT + P L E + + + L IAS G Q+++PL D P
Sbjct: 304 LGSQGFLVSPTAPFRAPLLTESEETLDAKRYQMMRLFLIASFFGLPQISIPLPTTD-APV 362
Query: 417 SVSFIARHGGDRFLLDTVQNMYASLQE 443
++SFI R G D L+ Q A +++
Sbjct: 363 ALSFIGRRGSDHALIALAQRFCAQMKK 389
>gi|297582895|ref|YP_003698675.1| amidase [Bacillus selenitireducens MLS10]
gi|297141352|gb|ADH98109.1| Amidase [Bacillus selenitireducens MLS10]
Length = 391
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 206/380 (54%), Gaps = 22/380 (5%)
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
+FAV D+F IEG+ G+P W ++H+ A T+ + L++ GAT G TV DE YS++
Sbjct: 28 TFAVKDVFHIEGHRNTAGNPHWLQSHAPAKATAPALVHLLQAGATLKGTTVTDEMMYSLH 87
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFR 181
G N HY TP NP S +PGGSSSG+AVA A L DF++G DT G VR+P+++CG+ GFR
Sbjct: 88 GENVHYGTPVNPFDKSLIPGGSSSGSAVATGAGLRDFAIGTDTGGSVRIPASYCGLFGFR 147
Query: 182 PSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFE 241
PS+G VS G+IP++ S DTVGWF R+ +L VG VL+ ++ +IA D F
Sbjct: 148 PSHGKVSLEGVIPLADSFDTVGWFTRNAALLEDVGEVLIGDSMPDAPDFKRAVIARDAFS 207
Query: 242 LLKIPADRVVQVVIKSTE---KLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + ++S K Q + +++LG++ D + R
Sbjct: 208 LLTDTQHNALMSAVRSCSSKVKSHEEQRITNDDLGDWVD------------------IFR 249
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLK 358
+IQ YE NH EW+++ +P P I +I E + + + ++ A + +++
Sbjct: 250 VIQGYEIWLNHGEWVKAHEPDFGPGIRERFHMAEQIKEADVAEARRRQLMIQDATADIMQ 309
Query: 359 DDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT-S 417
D +++ PT A PP +G + + R L +IA ++G QVT+P+ P +
Sbjct: 310 PDTLMIIPTIAGEPPAVGLPPEEVDKIRQRTMKLTAIAGLNGLPQVTIPVKRGGGLPPLA 369
Query: 418 VSFIARHGGDRFLLDTVQNM 437
+S +A G DR LL V ++
Sbjct: 370 ISILAPKGRDRDLLSFVTSL 389
>gi|295703180|ref|YP_003596255.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
DSM 319]
gi|294800839|gb|ADF37905.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
DSM 319]
Length = 399
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 209/386 (54%), Gaps = 16/386 (4%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+PP L LSFA+ D+FD++G+++ G+P+W TH AS + VV+ L++ GA G
Sbjct: 15 VPPTGTGMLNNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVVAALLKEGAALKG 74
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
T DE Y +NG N HY TP NP + ++PGGSSSG+AVAVAA + DF++G DT G VR
Sbjct: 75 VTHTDELMYGLNGENAHYGTPVNPKSADRIPGGSSSGSAVAVAAGITDFAIGTDTGGSVR 134
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+PS++CGI G+RPS+G +S G+IP++ S DTVG ARD L+ VG VLL S
Sbjct: 135 IPSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGAVLLN-------S 187
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
++ F L +P D V+++V + + + + ++ E F S + + +
Sbjct: 188 TSRV----SGFTRLYVPTD-VMELVDEQSMRALAPSI---NHVMESF-STIEEIAIAPQG 238
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
RL+Q E H EWI+ P DI + ++ + + R E+
Sbjct: 239 FSTYMETFRLLQGKEIWQTHGEWIQKENPMFGEDIGSRFQWASTLTLLNMNYIEEKRREL 298
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
R + S L ++GIL+ PT P P K E+ + R + IA +SG QVT+P G
Sbjct: 299 RYFMYSQLGEEGILILPTAPGPAPVKDAKGPELENRRLRTLQMTFIAGLSGLPQVTIPAG 358
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQ 435
D P +SFIA + D LL+ V+
Sbjct: 359 ELDGLPVGLSFIAGYNQDEKLLNWVK 384
>gi|403068359|ref|ZP_10909691.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oceanobacillus sp.
Ndiop]
Length = 391
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 204/384 (53%), Gaps = 19/384 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+F+V D+ I+G+ G G+P+W +H A R + V+ L++ GA G T DE
Sbjct: 23 LDGLTFSVKDVIAIKGHTNGAGNPDWLASHDEAGRHAPVIERLLQHGARLHGVTHTDEIM 82
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP NP AP ++PGGSSSG+AVAV+ VDF+LG DT G VR+PSA+CGI
Sbjct: 83 YSLNGENYHYGTPVNPKAPDRIPGGSSSGSAVAVSGGSVDFALGTDTGGSVRIPSAYCGI 142
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
GFRP++GA+S G+IP++ S DT+GW AR P I+R VG+ LL + I
Sbjct: 143 FGFRPTHGAMSMEGVIPLAQSFDTIGWMARSPAIMRKVGNALLDEADQNDAGKTEFIFLK 202
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
+E L V+ EKL G + + +L ++ N
Sbjct: 203 QAWEFLDEDTSNVLSAFTPIFEKL-GSKSIASASLSDW------------------ANAF 243
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
R IQ E H +WI +PA PDI+A +++ E +R E+ ++ L
Sbjct: 244 RYIQGIEIWQEHGKWIRQTRPAFGPDIAARFEWASTLNKDGAEKEFELRKELWKTLAEEL 303
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
++G+ V PTT PKL E+ +N+ L IA ++G QVT+P D P
Sbjct: 304 GNNGVFVIPTTPGTAPKLNLASKELEERRNKTMQLTCIAGLAGLPQVTIPAAEIDGMPVG 363
Query: 418 VSFIARHGGDRFLLDTVQNMYASL 441
+S IA DR LL V+ ++ ++
Sbjct: 364 LSIIANRNQDRRLLMLVEKIFETI 387
>gi|168046070|ref|XP_001775498.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673168|gb|EDQ59695.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 306
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 181/305 (59%), Gaps = 15/305 (4%)
Query: 69 FDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYD 128
FD+E +TGFG P+W +H A +T+ V+ L + GATCIGKT++DE + + G N+
Sbjct: 1 FDVEKKITGFGSPDWENSHEPAIKTAPVLVKLRKAGATCIGKTIMDEMGFCLLGANRWLG 60
Query: 129 TPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVS 188
TP NP + S++ GGSSSGAAV+V + +VDF++GIDTVG VRVP+A CG+LGFR S+GA+S
Sbjct: 61 TPENPFSTSRICGGSSSGAAVSVGSKVVDFAIGIDTVGDVRVPAACCGVLGFRSSHGAIS 120
Query: 189 HMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPAD 248
G IP+++S D VGWFAR+ +LR VG L + P++ +A D F+L +
Sbjct: 121 LEGTIPVASSFDAVGWFARNAGLLRLVGRQLCPHVVMDGKGPKRFYMAHDVFKLSAVSHL 180
Query: 249 RVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE-------------LKN 295
R V+ +S ++ GR L + N EY + P+++ F K L+
Sbjct: 181 RTADVLARSVQRTVGRHTLCNLNFIEYLEDHAPAIQTFKKELERMGLDSSQYTALDVLRE 240
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGE--MLEISETVIENCKSIRNEMRSAI 353
M L QR+EFK NH EWI KP L + + + + +L SE + +R E+ S +
Sbjct: 241 SMLLFQRHEFKGNHGEWIAKAKPYLTRTVESRVHKAVLLPDSEALRVIAIQVREEISSLM 300
Query: 354 SSLLK 358
++LLK
Sbjct: 301 NNLLK 305
>gi|402300440|ref|ZP_10819942.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
alcalophilus ATCC 27647]
gi|401724419|gb|EJS97783.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
alcalophilus ATCC 27647]
Length = 390
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 218/391 (55%), Gaps = 15/391 (3%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
L P A L+G SFAV D+F IEGY + G+P W TH A T+ V++ L GA IG
Sbjct: 15 LEPLATGILSGKSFAVKDVFAIEGYTSTAGNPNWFATHKPAEETAEVITILRNNGAKMIG 74
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
T+ DE YS+NG N HY TP NP AP+++PGGSSSG+A VAA LVDF++G DT G VR
Sbjct: 75 TTITDELMYSLNGENIHYGTPVNPKAPTRIPGGSSSGSASVVAAGLVDFAIGTDTGGSVR 134
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+PS++CGI GFRP++GAVS G+IP++ S DTVGW D K+L + +L+ ++ S
Sbjct: 135 IPSSYCGIYGFRPTHGAVSVDGLIPLAKSFDTVGWMTEDKKLLIEIARLLISSQEKSESS 194
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
R+++ +D + L+ + ++K+ EK+ ++V+ L ++ + +
Sbjct: 195 FRKLLFPEDAWALVDKETN---GELLKTIEKV--KEVMPTHELIMLEENGLST------- 242
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
K + R+IQ YE H EW+ + P P I +I+E + ++ +
Sbjct: 243 ---WKEIFRIIQGYEIWQEHGEWVSATNPQFGPGIKERFAMASKITEEEFKQMAKLQAVI 299
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
+ + +L +D +L+ PT P L E E+ +++ L +IA ++G QVT+P+
Sbjct: 300 KERLFRILTEDTLLIVPTVPGVAPLLNLPEDQVEERRSKTLQLSAIAGLAGLPQVTIPID 359
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
+ P SVS IA D LL+ V + A+
Sbjct: 360 TNLEAPISVSIIAGPSQDIRLLEWVNKLEAN 390
>gi|251799861|ref|YP_003014592.1| amidase [Paenibacillus sp. JDR-2]
gi|247547487|gb|ACT04506.1| Amidase [Paenibacillus sp. JDR-2]
Length = 395
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/396 (40%), Positives = 213/396 (53%), Gaps = 31/396 (7%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
+ AF+E LPP PL GL+FAV D+F I+GY +G G+P+W RTHS +T
Sbjct: 5 YKAFVEPE------LELPPVGEGPLRGLTFAVKDVFAIKGYTSGAGNPDWLRTHSPWEKT 58
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
++ +S L+ GA G T DE YSING N HY TP NP AP ++PGGSSSG+AVAVAA
Sbjct: 59 ASSISKLLASGARLTGTTHTDELMYSINGQNDHYGTPVNPKAPDRIPGGSSSGSAVAVAA 118
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
VDF+LG DT G VRVP+A+CGI GFRP++ VS G+IP++ S DTVGW ARD +LR
Sbjct: 119 GAVDFALGTDTGGSVRVPAAYCGIYGFRPTHDFVSIDGVIPLAPSYDTVGWMARDISLLR 178
Query: 214 HVGHVLLQLPFAAQRSPRQ----IIIADDCFELLKIPADRVVQVVIKSTEKLFGR---QV 266
VG VLL A+ +PRQ +I A++ +E + S K G Q+
Sbjct: 179 QVGDVLLPGTTDAE-TPRQDFRRLIFAEEAWEKAE-----------PSCRKALGSVCIQL 226
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
++ E + + + S P +G + + R Q E H EWI KP I A
Sbjct: 227 VQTEGMTQEWRSVAP--EGLEAWS----HAFRTTQGREIWQTHGEWIVREKPVFGESIGA 280
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
IS E ++R +R + LL DDG+L+ PT P E+ +
Sbjct: 281 RFASASTISGAEAERDGALREIIRKRLRELLGDDGLLIIPTIPGTAPSRTIHGPAVEERR 340
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIA 422
R L IA +SG QVT+P G D P ++S IA
Sbjct: 341 FRTMQLSCIAGLSGLPQVTIPAGEVDGAPIALSVIA 376
>gi|433461543|ref|ZP_20419152.1| peptidase M22, glycoprotease [Halobacillus sp. BAB-2008]
gi|432190043|gb|ELK47094.1| peptidase M22, glycoprotease [Halobacillus sp. BAB-2008]
Length = 410
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 206/381 (54%), Gaps = 26/381 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+F V D+ + G+ G+P+W TH+ A + V+ L+E GA G T DE
Sbjct: 20 LDGLTFGVKDVISVAGHTNAAGNPDWLNTHAPAQYNAPVIDRLLEEGALLHGMTHTDELM 79
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP NP +P+ +PGGSSSG+A A + V F+LG DT G VR+PS++CGI
Sbjct: 80 YSLNGENVHYGTPINPKSPACIPGGSSSGSAAAASGGEVHFALGTDTGGSVRIPSSYCGI 139
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR--QIII 235
GFRP++GA+ G+IP++ S DT+GW A DP IL VG + + + SPR +I I
Sbjct: 140 YGFRPTHGAIDVQGVIPLAPSFDTIGWMADDPVILSRVGDIFFR---RGKGSPRLEKIKI 196
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQ---VLKHENLGEYFDSKVPSLKGFHKTNGE 292
A D +ELL + ++ + +F + +L + LG++ D+
Sbjct: 197 ASDLWELLDPDLHKCYAAPLRQVKAMFKEEETRLLSEDGLGKWADT-------------- 242
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
R++Q E H WI V+P DI + IS + K+ RN++++
Sbjct: 243 ----FRVLQAQEIWQEHGGWITDVRPRFAYDIYRRLLWARSISGQDMTERKAYRNKIKAW 298
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
++ + DDG+L+ PTT PPK G ED + + L IA ++G QVT+PL
Sbjct: 299 TNAWIGDDGVLLLPTTPAGPPKRGTPASRLEDIRTKTMKLSCIAGLAGLPQVTIPLPSTV 358
Query: 413 KCPTSVSFIARHGGDRFLLDT 433
+ P S+S IA G D LL+T
Sbjct: 359 EGPVSISLIAAKGQDLKLLET 379
>gi|86749206|ref|YP_485702.1| amidase [Rhodopseudomonas palustris HaA2]
gi|86572234|gb|ABD06791.1| Amidase [Rhodopseudomonas palustris HaA2]
Length = 399
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 199/364 (54%), Gaps = 16/364 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+FAV D FD+ G TG G PEW TH +++S VV L G T +GKT DE A
Sbjct: 28 LAGLTFAVKDFFDVAGLPTGAGSPEWLATHPVPTQSSPVVDRLFAAGGTMVGKTHTDEMA 87
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+S+NG N HY TP NPAAP ++PGGSSSG+A A A LVDF++G DT G VR+P+++CG+
Sbjct: 88 WSLNGENAHYGTPINPAAPGRIPGGSSSGSAAATAGGLVDFAIGSDTGGSVRLPASYCGV 147
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G R ++G + G +P++ S DTVGWF+R ++ VG VLL A R P++++IA
Sbjct: 148 YGIRTTHGRIPLDGAVPLAPSYDTVGWFSRSAALMARVGEVLLDG-VRAPRRPKRVLIAR 206
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
D F L+ RVV+V+ +L +L E + P+ +N
Sbjct: 207 DLFAALE---PRVVEVLQPGLAQL--AAMLGEPEPVEVAGDQRPA----------WRNAF 251
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
R++Q E H W+ +VKPA P + + + K++R+ + + + +LL
Sbjct: 252 RVLQSAEAWAAHGAWVNAVKPAFGPGVKERFAAAAVLDPAEVVAAKALRDTITATMRTLL 311
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
+DD +L+ PT P E ++ R+ LL A +G Q+++PL D CP
Sbjct: 312 QDDAVLIAPTAPGIAPLRNSTGEALETFRARSLELLCPAGHAGLPQLSLPLATLDDCPIG 371
Query: 418 VSFI 421
+S I
Sbjct: 372 LSLI 375
>gi|298293565|ref|YP_003695504.1| amidase [Starkeya novella DSM 506]
gi|296930076|gb|ADH90885.1| Amidase [Starkeya novella DSM 506]
Length = 401
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 217/415 (52%), Gaps = 40/415 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
FGAF + + P PL+GLSFA+ D+FD+ G TGFGHP W TH+AA++T
Sbjct: 14 FGAFCHENHVAGPA-----IGDGPLSGLSFAIKDVFDVAGSCTGFGHPTWLATHTAATQT 68
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ V+ L+ GA G+T+ DE YS++G N HY P NPAA ++PGGSSSG+AVAVAA
Sbjct: 69 AAAVTRLLSTGAALRGRTISDELCYSLSGENFHYGMPVNPAARERLPGGSSSGSAVAVAA 128
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
VDF++G D G VRVP+++CG+ G RP++G VS G+ + DTVGWFARD +L+
Sbjct: 129 GQVDFAIGTDCGGSVRVPASYCGLFGLRPTHGRVSLEGVSRFAPRFDTVGWFARDAALLK 188
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG 273
VG VLL A + ++++A D FE A +++ K+ E+L L +G
Sbjct: 189 RVGEVLLG--STAPQGFDRVLVATDAFEQCDPQARALLE---KAVERLGSPSPLHLSPIG 243
Query: 274 --EYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
+ D+ R +Q +E + WI +P+ + +
Sbjct: 244 LDRWLDT------------------FRTLQAWEVWQSLGGWINQTRPSFGDGVGQRLAAA 285
Query: 332 LEI----SETVIENCKSIRNEMRSAISSLLKDDGILVTPTT-AYPPPKLGGKEMLSEDYQ 386
++ +E + +I E+ AI DG+++ PTT PP + + Y+
Sbjct: 286 EQVGRADAEAARQRADAIALELDEAIG-----DGLVLLPTTPGAPPLRATASTEIENAYR 340
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
RA LL A + G Q+T+P+G D P +S +AR G D L+D +A L
Sbjct: 341 YRAMQLLCPAGLGGLPQLTIPVGTVDGAPVGLSIMARRGKDMDLMDLAAKAFADL 395
>gi|381166975|ref|ZP_09876188.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Phaeospirillum molischianum DSM 120]
gi|380684027|emb|CCG41000.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Phaeospirillum molischianum DSM 120]
Length = 409
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 192/384 (50%), Gaps = 21/384 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+FA D+FDI GYVTG G+P+W R A +T+ VS L+E GA +GKT DE
Sbjct: 41 PLAGLTFAAKDVFDIAGYVTGAGNPDWRRLAEPARQTAWAVSALLESGARLVGKTHTDEL 100
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
I G N HY TP NP AP +PGGSSSG+AVAVA L D +LG DT G RVP++FCG
Sbjct: 101 TRGIFGDNSHYGTPENPRAPGHVPGGSSSGSAVAVAGGLADMALGTDTAGSTRVPASFCG 160
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP+ G + G++ S + DTVG A DP +L +G VLL+ Q R +++
Sbjct: 161 VFGLRPTLGLIPMDGVLGQSNTFDTVGLLAADPDVLARMGEVLLRKKVGNQHPARAVVL- 219
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
+D E AD V I++ L ++ P ++G + L +
Sbjct: 220 EDTMEA----ADPEVAAAIEAV-------------LPRIAETVAPVVRGTRISPVPLPDW 262
Query: 297 MR---LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+ IQ E +WI P +++ ++ + + + R R +
Sbjct: 263 IEPQNAIQGREAWEVFGDWINRSNPRFGFEVADNFLRGSRVANRTLSSSRGFRLRARRWV 322
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
L+ +LV PTT P + D ++R SL +IA ++GC Q+++PL +
Sbjct: 323 LDALEGHAVLVLPTTPVTAPPVQSPRSEMWDIRSRIISLTTIAGMAGCPQISLPLCTVNG 382
Query: 414 CPTSVSFIARHGGDRFLLDTVQNM 437
P VS I GGD LL + +
Sbjct: 383 RPVGVSLIGPRGGDSLLLAAARRI 406
>gi|226226445|ref|YP_002760551.1| putative amidase [Gemmatimonas aurantiaca T-27]
gi|226089636|dbj|BAH38081.1| putative amidase [Gemmatimonas aurantiaca T-27]
Length = 404
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 202/380 (53%), Gaps = 22/380 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+F + D FD+ G+ TGFG P+W RTH A + + V+ TL+ GA +GKT +E
Sbjct: 32 PLVGLTFGLKDNFDVAGHRTGFGSPDWFRTHPPAMQNTPVLDTLLAAGARMVGKTHTEEM 91
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
+S+ G N HY TP NPAAP ++PGGSSSG+A AVA LVDF++G DT G VR P++FCG
Sbjct: 92 TFSLTGENAHYGTPINPAAPDRVPGGSSSGSASAVAGGLVDFAIGSDTGGSVRAPASFCG 151
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-PRQIII 235
I G RP++G +S G P++ DT GWFARDP++LR VG VL A + P ++
Sbjct: 152 IYGLRPTHGRISLAGACPLAPMFDTCGWFARDPELLRRVGQVLFASSGAHESGEPGALLY 211
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFG--RQV-LKHENLGEYFDSKVPSLKGFHKTNGE 292
A D F D + + + + G R V + + L +++
Sbjct: 212 ASDAFAHTMPGVDDALMPAVSAVSGVLGALRPVTVSPDGLPAWYE--------------- 256
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
V R++Q E H W+ ++P I+ +++ +E + R ++
Sbjct: 257 ---VFRVLQFGEIWKTHGGWVRQMRPTFGAQIAPRFEAASKVTVPEVEAMTAERVRIQQR 313
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
+ +LL D+ ++V PT P+ G + + R+ +LL IA + G Q+++PL +
Sbjct: 314 LDALLADNAVMVLPTVPDCAPRRGLPLPETVTVRERSLALLCIAGLGGLPQLSMPLAKVE 373
Query: 413 KCPTSVSFIARHGGDRFLLD 432
P +S IA G D LLD
Sbjct: 374 GGPIGLSLIAARGNDELLLD 393
>gi|375265374|ref|YP_005022817.1| amidase [Vibrio sp. EJY3]
gi|369840695|gb|AEX21839.1| amidase [Vibrio sp. EJY3]
Length = 393
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 199/398 (50%), Gaps = 29/398 (7%)
Query: 47 PQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGAT 106
P LP L GLSF DLFD+EGYVTG G+P+W THS A TS ++ +L+ GA
Sbjct: 13 PDYLPALKQGSLNGLSFVFKDLFDVEGYVTGAGNPKWLETHSKAESTSLLIISLLNAGAE 72
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
C G+ DE AYS+NG N HY TP NP AP +PGGSSSG+AVAVA VDFS+G DT G
Sbjct: 73 CKGRVQTDELAYSLNGINVHYGTPVNPLAPDCLPGGSSSGSAVAVAKGDVDFSIGTDTGG 132
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA 226
VRVP+++CG+ G RP+ G +S ++ S DT G F+RD L +V + L A
Sbjct: 133 SVRVPASYCGLFGLRPTLGQLSLESSFTLAESFDTAGVFSRDLSTLENV-YACLGPETQA 191
Query: 227 QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
Q + +I+ +S K G + L E L ++ DS L+
Sbjct: 192 QTVAKTLILD-------------------QSLSKTLGNERL--EELKQWADSANIQLEYS 230
Query: 287 HKTN------GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIE 340
+ GEL + R IQ YE + H+ W++ + L P I + IS
Sbjct: 231 NALQDAGYDLGELSALFRTIQGYEIIDRHSAWLDEWQHTLAPAIQERVVWARTISAQDYR 290
Query: 341 NCKSIRNEMRSAISSLLKD-DGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVS 399
K + + S ++ L D D + V PTT PKL + +Y++ L S+A +S
Sbjct: 291 KGKEQQAKFTSWLAEQLADKDTLWVLPTTPGKSPKLTTPDADLAEYRSDLMGLTSLAGLS 350
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
G Q+ +P+ P VS + + L+ T ++
Sbjct: 351 GFPQLHIPMNNVTNGPCGVSLLGSANSEYDLIATASSL 388
>gi|296446117|ref|ZP_06888065.1| Amidase [Methylosinus trichosporium OB3b]
gi|296256311|gb|EFH03390.1| Amidase [Methylosinus trichosporium OB3b]
Length = 397
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 198/391 (50%), Gaps = 20/391 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL F V D++G V+ GHP WA TH A + V L+ GA +GK +DE
Sbjct: 25 PLASARFVVKQNIDVDGVVSSNGHPTWAATHGPAPIAAPAVDRLLAAGAHLVGKAHMDEM 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ G N HY P NPAAP + PGGSSSG+AVAVAA L DF+LG DT G R P++FCG
Sbjct: 85 AYSLLGANAHYGAPLNPAAPDRHPGGSSSGSAVAVAAGLADFALGTDTAGSCRAPASFCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GFRPS+GAVS G+IP++ SLDT+GWFARD +L VG VL LP P + ++A
Sbjct: 145 VYGFRPSHGAVSSNGVIPLAQSLDTIGWFARDVDMLARVGAVL--LPEDLCDGPFERVVA 202
Query: 237 -DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
++ F + + ++ +++ + LGE F S+ SL F
Sbjct: 203 LEEAFAQSDAETNEAARPAREALARMYS---VGEARLGEDFWSQ--SLHCF--------- 248
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R +Q +E + WIE P P ++ +++ + + R R +
Sbjct: 249 --RNLQAFEAWSAQGAWIERAAPRFGPGVAERFALAAKVTASEKAEADAFRRAARMRVDE 306
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
+L + +LV PTT + P L E + + F AS G Q+++PL P
Sbjct: 307 ILPPNAVLVVPTTPFVSPLLTESEEELDRKRYLMFRTFLFASFFGLPQISIPLPRAPGAP 366
Query: 416 T-SVSFIARHGGDRFLLDTVQNMYASLQEQA 445
+S I DR L++ + + A L E+A
Sbjct: 367 PLGISLIGPRWSDRRLIEAARGLAARLAERA 397
>gi|336113566|ref|YP_004568333.1| amidase [Bacillus coagulans 2-6]
gi|335366996|gb|AEH52947.1| Amidase [Bacillus coagulans 2-6]
Length = 394
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 205/412 (49%), Gaps = 21/412 (5%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
++ + AFI+ P L PK L G +FAV D+F ++G+ G+P+W H A
Sbjct: 1 MEDKWNAFID------PAVTLWPKRNGLLDGYTFAVKDVFAVKGHRNAAGNPDWYDFHPA 54
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
A + V+ L+ GA G T DE YS+NG N HY TP NP ++PGGSSSG+AV
Sbjct: 55 AGENAPVIEWLLNEGARLTGMTHTDELMYSLNGENFHYGTPVNPVLKDRIPGGSSSGSAV 114
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AVAA DF++G DT G VR+PSA+CGI GFRPS+G + G+IP++ S DT+GW ++DP
Sbjct: 115 AVAAGCTDFAIGTDTGGSVRIPSAYCGIFGFRPSHGVIKMKGVIPLAPSFDTIGWMSKDP 174
Query: 210 KILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKH 269
IL VG VL + + I A+D +EL A + +++S + ++H
Sbjct: 175 GILYKVGQVLFKPDQDIRPQFESIFFAEDAWEL----AGEETRKLLESKWHHLLKNRVQH 230
Query: 270 ENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIG 329
D + S + RL+Q E H WIE +P PDI+
Sbjct: 231 VVRTAIADQTLKS----------WSHAFRLLQGREVWKTHGAWIEHARPQFGPDIAERFK 280
Query: 330 EMLEISE-TVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNR 388
I+E + E +R +R + LL G+LV PTT P P G E +
Sbjct: 281 WASTITEDSHWEKANQLRLNIRDKLRGLLGSSGLLVLPTTPGPAPATGRSMEEIEKTREH 340
Query: 389 AFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
L IA ++G Q+T+P P +S +A + D LL V+ + S
Sbjct: 341 TMQLSCIAGLAGLPQLTIPFLTATGEPIGLSVVAGYRQDVKLLAWVEELMLS 392
>gi|307106484|gb|EFN54730.1| hypothetical protein CHLNCDRAFT_35982 [Chlorella variabilis]
Length = 449
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 197/392 (50%), Gaps = 20/392 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTGL+ V D FD+ G+ T G P W TH A R + V L++ GAT IG V+DE
Sbjct: 72 PLTGLTAVVKDCFDVAGHRTSNGSPAWLETHPPAQRNAAAVQALLDAGATIIGTNVMDEM 131
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ G N HY TP NPAAP ++PGGSSSG A AVAA D LG DT G VRVP+ CG
Sbjct: 132 AYSLAGENAHYGTPANPAAPGRIPGGSSSGTAAAVAAGDADLGLGGDTGGSVRVPACHCG 191
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP---RQI 233
ILG RP++G VS G +P++ S DT GWFARD +LR VG VLL R P R++
Sbjct: 192 ILGIRPTHGRVSLQGAVPLAPSFDTGGWFARDAGVLRAVGGVLLD---GGSRRPAQLRRL 248
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
++A D F L + +T+ L+ K + + SK ++ T G
Sbjct: 249 LVAADAFGLAE----------EATTKALYDALSPKIDQVAALL-SKPQEVEVGSSTGGLS 297
Query: 294 K---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
+ N R+ Q +E H W+ +P P I +S E R R
Sbjct: 298 QAWFNAFRVHQAHEIWQQHGAWVTEHRPNFGPGIRERFQMAEGVSRKQYEEAAQQRGAAR 357
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
++ LL DG+L+ PT P P L + ++ SL IA +SG QV VP+
Sbjct: 358 QRLAELLGGDGVLMLPTAPAPAPLLNTPSDQLDAFRTSLISLTCIAGLSGFPQVNVPIAD 417
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
+ P + I G D LL+ + + A L+
Sbjct: 418 VEGLPVGLGLIGPPGSDEDLLELTEQLLAVLR 449
>gi|255074227|ref|XP_002500788.1| predicted protein [Micromonas sp. RCC299]
gi|226516051|gb|ACO62046.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 385
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 194/389 (49%), Gaps = 23/389 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT-STVVSTLVEGGATCIGKTVVDE 115
PL GL+FAV D D+ G+ TG G P W TH +R + V++L+ GA C+GKT +DE
Sbjct: 6 PLAGLTFAVKDNLDVAGHRTGCGQPTWLDTHPEPARQHAPPVASLLAAGAACVGKTQMDE 65
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A+++ G N HY TP NPAAP ++PGGSSSG+AVAVAA D +LG DT G VRVP+++C
Sbjct: 66 LAWALQGENHHYGTPINPAAPERVPGGSSSGSAVAVAAGYADVALGTDTAGSVRVPASYC 125
Query: 176 GILGFRPSYGAV-SHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI- 233
G+ GFRP++G V + G +P++ S D VGWFARD + G VLL P+ A + +
Sbjct: 126 GLCGFRPTHGRVDATRGCVPLAPSFDVVGWFARDATTMLRCGSVLLP-PWGAWDTAFDLR 184
Query: 234 ---IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
IA D FEL D + ++ + LGE V G +
Sbjct: 185 FDGAIARDAFELC----DEETRATLREAVA----RACGPGPLGEAGGGTVEVDVGGGGST 236
Query: 291 ---GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
E NV R+IQ E H W+ +P P + +++ R+
Sbjct: 237 PPLTEWWNVFRVIQANEVWRAHGAWVSEHQPRFGPGVKERFEGAGGVTDAEAAEASKTRD 296
Query: 348 EMRSAISSLLKD-----DGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCC 402
+ +++ S + D D L PT+ PP G E ++NR L + A ++
Sbjct: 297 AIAASMESTMVDEATGKDRFLFLPTSPGPPLASGADAQTVESFRNRQLRLTAAAGLARLP 356
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
Q TVP+ P +S + G D LL
Sbjct: 357 QATVPVPRRSGPPLGLSVVGPRGTDEALL 385
>gi|323137392|ref|ZP_08072470.1| Amidase [Methylocystis sp. ATCC 49242]
gi|322397379|gb|EFX99902.1| Amidase [Methylocystis sp. ATCC 49242]
Length = 389
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 202/388 (52%), Gaps = 19/388 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG +FAV + D+ G V+ GHP+WA TH+AA + VV L+ GA +GKT +DE
Sbjct: 21 PLTGATFAVKENIDVAGQVSTNGHPQWAATHAAAHANAPVVDRLLAAGARLVGKTHMDEM 80
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ G N H+ TP NPAA ++ PGGSSSG+AVAVAA LV F+LG DT G R P+AFCG
Sbjct: 81 AYSLLGANPHFGTPINPAAQNRHPGGSSSGSAVAVAAGLVSFALGTDTAGSCRAPAAFCG 140
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I GFR S+GA+ G+IP++ SLD +GWFARD + VG VLL + R+ ++
Sbjct: 141 IFGFRSSHGAIPIDGVIPLAPSLDVIGWFARDLDRMVDVGDVLLPAD-SDDGEFREAVLL 199
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D F ++ I + R+ + E+F + +
Sbjct: 200 SDAFHGVETEFAASAAPAIDQLKSAPWREGRLDD---EFFKTALAHF------------- 243
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
R +Q +E +H WI + P + + +++ ++ E R + ++
Sbjct: 244 -RNLQAHEAWTSHGGWIAAHHPTFGKGVEERLAIASKVTLEQKRAAEAFGAEARKKVDAM 302
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L DDG +V+PTT + P L + + + + L IAS G Q+ +PL D P
Sbjct: 303 LGDDGFIVSPTTPFRAPLLADSDEQLDAKRYQMMRLFLIASYFGLPQIALPLPSSD-APV 361
Query: 417 SVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+SFI R G DR LL + A ++ +
Sbjct: 362 GLSFIGRRGSDRKLLAFARRFCAKMKAR 389
>gi|407781884|ref|ZP_11129100.1| amidase [Oceanibaculum indicum P24]
gi|407206923|gb|EKE76867.1| amidase [Oceanibaculum indicum P24]
Length = 392
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 206/393 (52%), Gaps = 35/393 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL+FA DLFDIEG+VTG G+P+W TH+ A+ T++ V L++ GA+ GKT+ DE
Sbjct: 25 PLSGLTFAAKDLFDIEGHVTGAGNPDWLATHAPATATASSVRKLLDAGASLYGKTITDEL 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ G N HY TP NPA P ++PGGSSSG+A AVA LVD +LG DT G +RVP+ CG
Sbjct: 85 AYSLAGVNMHYGTPVNPAGPDRLPGGSSSGSASAVAGGLVDTALGTDTGGSIRVPANNCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ---- 232
+ G R ++G V+ G++P++ S DTVGWF RD + + +G VLL PR+
Sbjct: 145 LYGIRTTHGRVAKDGLVPLADSFDTVGWFTRDARTMARIGEVLL--------GPRESFPD 196
Query: 233 --IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQ---VLKHENLGEYFDSKVPSLKGFH 287
++IA DCF+L+ ++ ++ G + L + +F +
Sbjct: 197 GRLVIATDCFDLVSADVRAALKPLVDRLIAAVGPRHYATLNPDGFDVWFAA--------- 247
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
R IQ +E H EWI KP + P+I+ +++ + +R
Sbjct: 248 ---------FRQIQGHEAWQAHGEWIAKTKPKMAPEIAERFNLGRQVTAEQVAEAGKVRE 298
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVP 407
+ R ++++L+ +L P ++ P P Y+ L ++G Q+T+P
Sbjct: 299 KARQRLAAMLQPGDVLCLPASSGPAPLKSMSGAAEGAYRAAMLKLTCTGGLTGMPQMTLP 358
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
L D CP +S G D LLD + + A+
Sbjct: 359 LAKLDGCPLGISIAGLPGSDWMLLDLAEKLEAA 391
>gi|420248045|ref|ZP_14751419.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398069433|gb|EJL60788.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 400
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 198/408 (48%), Gaps = 19/408 (4%)
Query: 35 GAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTS 94
GAF+ P PP+ L GL AV D+FDI G TG G+ W A+RT+
Sbjct: 12 GAFVADGFDALPAAARPPRTGDKLAGLRLAVKDVFDIAGLRTGSGNLAWRDQQPVAARTA 71
Query: 95 TVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAAD 154
V L+E GA IGKTV DE YS+ G N HY TP NPA P+++PGGSSSG+ VAVAA
Sbjct: 72 LAVRGLLEEGAQWIGKTVTDELTYSLAGVNAHYGTPVNPADPARIPGGSSSGSVVAVAAG 131
Query: 155 LVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRH 214
D +LG D G VR+P+++CG+ G RP++G ++ G + ++ S DTVGWFARD + L
Sbjct: 132 HADIALGTDCGGSVRLPASYCGVWGMRPTHGRIATDGCLTLAHSFDTVGWFARDGRTLAD 191
Query: 215 VGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE 274
+ VL R +++A D L +P + + V ++ R + LG+
Sbjct: 192 IFEVLA----------RSVVMAGDGPFALHVPRNLLACV----DAQVAARFEASLQVLGD 237
Query: 275 YFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
P + + R +Q E + W + PD+ A L I
Sbjct: 238 VVTFVAP-----EASLADWAQAFRALQAAEIAQRYGPWAREHAASFGPDVGARFAMSLTI 292
Query: 335 SETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS 394
+ I + + +R E A++ L + PT P+ ++ + R+ +L
Sbjct: 293 TPEQIADAQRVRVEAIRAMADALPQGSYWLVPTVPGVAPRADASAQTVDNTRARSQQMLC 352
Query: 395 IASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
+A ++G QV +P +D P +S I G D +L T + ++ +++
Sbjct: 353 VAGLAGLPQVNMPWMSFDGAPVGLSLIGARGADEGVLRTARAVHEAMR 400
>gi|374711333|ref|ZP_09715767.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Sporolactobacillus
inulinus CASD]
Length = 389
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 201/382 (52%), Gaps = 19/382 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G FA D+F + G+VT G P WA TH AA + VV +L+E GA G TV DE
Sbjct: 25 LNGTVFAAKDVFAVRGHVTSAGQPLWASTHPAAEAHAPVVKSLLECGARLRGMTVTDELM 84
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ G N HY NP P GGSSSG+AVA A++ VDF++G DT G VR+PS++CG+
Sbjct: 85 YSLKGDNIHYPPTINPRVPDAYSGGSSSGSAVATASEAVDFAIGTDTGGSVRIPSSYCGL 144
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RPS+GAVS G++P++ S DTVGW AR ++L VG L LP A S ++
Sbjct: 145 FGIRPSHGAVSLEGVVPLAPSFDTVGWMARSAELLERVGSCL--LPEKASASFQRFYQLK 202
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
+ + + P+ V++S R +K E+L D K+ + EL
Sbjct: 203 EAWAQIDHPS------VLQSL-----RAFIK-EHLS---DLKIEPTQLPLAKPAELAETF 247
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI-SETVIENCKSIRNEMRSAISSL 356
R++Q YE +H WIE P D+ ++ + + + + + I +
Sbjct: 248 RVLQGYEAWQSHGLWIEQNHPHFARDVGGRFEAASKMKKDKAYQQAAATKQQFTEKIRAF 307
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L DG+L+ PTT P PK G S+ + R L IA VSG QVTVP+ P
Sbjct: 308 LGSDGLLIIPTTYGPAPKRGSGAEESDKVRARTMQLTCIAGVSGLPQVTVPI-LELAAPI 366
Query: 417 SVSFIARHGGDRFLLDTVQNMY 438
+SFI+ +G DR LL V+N++
Sbjct: 367 GLSFISGYGTDRQLLAFVRNVF 388
>gi|260770441|ref|ZP_05879374.1| amidase [Vibrio furnissii CIP 102972]
gi|260615779|gb|EEX40965.1| amidase [Vibrio furnissii CIP 102972]
Length = 393
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 203/397 (51%), Gaps = 25/397 (6%)
Query: 47 PQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGAT 106
P LP A L+G F DLFD+EGY TG G+P W +TH A+ TS +++ L+ GA
Sbjct: 13 PDTLPATAQGTLSGTRFVFKDLFDVEGYATGAGNPTWLKTHQMATATSPLITALLGQGAE 72
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
C+G+ DE AYS+NG N HY TP NP AP+ +PGGSSSG+AVAVA + DF++G DT G
Sbjct: 73 CVGRVQTDELAYSLNGQNSHYGTPINPKAPNCIPGGSSSGSAVAVAKNDCDFAIGTDTGG 132
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA 226
+RVP+++CG+ G RP+ G + ++ S DT G F RD +++R V VL+ +
Sbjct: 133 SIRVPASYCGLFGLRPTLGTLDLSHCFELAKSFDTAGIFTRDLRLMRDVWSVLVARHQSG 192
Query: 227 QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+R R + D Q V+ + Q + + E V + G+
Sbjct: 193 ERVTRVYL-------------DAQCQAVMSAARLERLSQQCQRAGI-EIIQGNVLAQNGW 238
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVI----ENC 342
T+ L + R IQ +E +H+ W+ +LDP IGE +E + T+ ++
Sbjct: 239 SLTD--LSLLFRTIQGFEIIEHHDAWLTQYGDSLDP----AIGERVEWARTITCEQYDHA 292
Query: 343 KSIRNEMRSAISSLLKDDGIL-VTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC 401
K + + + I + LK L PTT PP L Y+++ L SIA +SG
Sbjct: 293 KGRQQDFQQQILTHLKQQRCLWAIPTTPSGPPSLTMPAGELAVYRSQLMGLTSIAGLSGL 352
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
Q+ +P+ + P +S + + LL T + +Y
Sbjct: 353 PQLHLPMEELLEGPCGISLMGLPHQEETLLVTGEAVY 389
>gi|407697710|ref|YP_006822498.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Alcanivorax
dieselolei B5]
gi|407255048|gb|AFT72155.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Alcanivorax
dieselolei B5]
Length = 389
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 200/385 (51%), Gaps = 27/385 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+FAV D+FDI G VTG G P W + A TS ++ TL+ GA +GKT DE
Sbjct: 22 PLQGLTFAVKDVFDIAGTVTGVGQPSWRASQPPARHTSPMIETLLAAGAELVGKTHTDEL 81
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
YS+ G N HY TP NPA P +PGGSSSG+A VAA LVDF+LG DT G VRVP+++CG
Sbjct: 82 TYSLAGQNAHYGTPPNPAVPGAVPGGSSSGSASVVAAALVDFALGSDTGGSVRVPASYCG 141
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G RP++G V + ++ S DT+GWFARD +++ +G +L LP + +PR++++
Sbjct: 142 IHGLRPTHGVVDYRHCAHLAKSFDTLGWFARDARLMARIGRIL--LPAGDRPAPRRLLLV 199
Query: 237 DDCFELLKIPADRVVQVVIKSTEKL----FGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
++ L + AD V Q+ + L FG + NL YF
Sbjct: 200 EEA--LAQSDADVVSQLEARVGNGLPGVTFGGSI-SVGNLDTYF---------------- 240
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
N R +Q YE WIE+ +P P + IS E+ + +R+
Sbjct: 241 --NAFRPLQAYEAWARFGSWIETEQPVFGPGVKERFEAASRISAAEAEDAREQCQALRTR 298
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
I +LL +D +L PTT L E ED + R + ++A +G Q+++PL +
Sbjct: 299 IRALLGEDTLLCLPTTPTSALPLQADEARVEDIRGRTLRMTALAGTTGLPQLSLPLLHDR 358
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNM 437
P +S I D+ LLD +
Sbjct: 359 DGPVGLSLIGPASSDQQLLDLAARL 383
>gi|390567075|ref|ZP_10247425.1| amidase [Burkholderia terrae BS001]
gi|389941018|gb|EIN02797.1| amidase [Burkholderia terrae BS001]
Length = 400
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 201/410 (49%), Gaps = 23/410 (5%)
Query: 35 GAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTS 94
GAF+ P PP+ L GL AV D+FDI G TG G+ W A+RT+
Sbjct: 12 GAFVADGFDALPAAARPPRTGDKLAGLRLAVKDVFDIAGLRTGSGNLAWRDQQPVAARTA 71
Query: 95 TVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAAD 154
V L+E GA IGKTV DE YS+ G N HY TP NPA P+++PGGSSSG+ VAVAA
Sbjct: 72 LAVRGLLEEGAQWIGKTVTDELTYSLAGVNAHYGTPVNPADPARIPGGSSSGSVVAVAAG 131
Query: 155 LVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRH 214
D +LG D G VR+P+++CG+ G RP++G ++ G + ++ S DTVGWFARD + L
Sbjct: 132 HADIALGTDCGGSVRLPASYCGVWGMRPTHGRIATDGCLTLAHSFDTVGWFARDGRTLAD 191
Query: 215 VGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE 274
+ VL R +++A D L +P + + V ++ R + LG+
Sbjct: 192 IFEVL----------ARSVVMAGDEPFALHVPRNLLACV----DTQVAARFEASLQVLGD 237
Query: 275 Y--FDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML 332
F + V SL + R +Q E + W + + D+ A L
Sbjct: 238 VVTFVAPVASLA-------DWAQAFRALQAAEIAQRYGPWARAHAASFGLDVGARFAMSL 290
Query: 333 EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSL 392
I+ I + + +R E A++ L + PT P+ ++ + R+ +
Sbjct: 291 TITPDQIADAQRVRIEAIRAMADALPQGSYWLVPTVPGVAPRADASAQTVDNTRARSQQM 350
Query: 393 LSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
L +A ++G QV +P +D P +S I G D +L T + ++ +++
Sbjct: 351 LCVAGLAGLPQVNMPWTSFDGAPVGLSLIGARGADEGVLRTARAVHEAMR 400
>gi|404330636|ref|ZP_10971084.1| Amidase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 395
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 207/415 (49%), Gaps = 42/415 (10%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
D+GAFI+ + PL GL FAV D+F ++GY G+P W AS
Sbjct: 6 DYGAFIDH------SLHISSGNSGPLGGLHFAVKDVFSVKGYKNTAGNPTWLEHAKRASE 59
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
+ V L+ GA +G TV DE YS+ G NKH+ NP A + GGSSSG+AVAVA
Sbjct: 60 NADAVDRLLTEGAALVGTTVTDELMYSLKGDNKHFPPTINPKAQNCYTGGSSSGSAVAVA 119
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
+ DF++G DT G VRVPS++CGI G RPS+G +S G+IP++ S DTV W + L
Sbjct: 120 SHQTDFAMGTDTGGSVRVPSSYCGIFGMRPSHGRISMKGVIPLAPSFDTVSWMSGSADTL 179
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPAD-----RVVQVVIKSTEKLFGRQVL 267
VG L LP + R + I + FEL++ P D R+++ +IK KL ++
Sbjct: 180 SKVG--LSLLPNQPVHTYRHLFIFNKAFELVQDPDDFTDFTRLLR-LIKERYKLQSVDLM 236
Query: 268 KHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAE 327
+ + EL R++Q E +H +WI+ A PD +
Sbjct: 237 QDHSF------------------EELTECFRILQGREAWLSHGKWIQ----ACHPDFGKD 274
Query: 328 IGEMLEISETVIEN-----CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLS 382
I E E + + E+ S++ E + + LL D +++ PTT P+ GG + +
Sbjct: 275 IAERFESASKIKEDEAYSQMLSLKREFTAEMRKLLGTDSMVLIPTTPGTAPERGGDFVTA 334
Query: 383 EDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
E +++ L +A +SG Q+T P K P +SFI+ + DR LL V +
Sbjct: 335 EQLRSKTMKLTCLAGLSGVPQITAPF-RQSKKPLGLSFISGYNTDRQLLSFVTEI 388
>gi|398837197|ref|ZP_10594507.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
gi|398209188|gb|EJM95869.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
Length = 393
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 200/376 (53%), Gaps = 17/376 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL AV D+FD+ GY TG G+P +R++ V L++ GA +GK DE
Sbjct: 23 PLAGLRLAVKDIFDVAGYPTGCGNPHMLAMSGIKTRSAPAVQALLDAGARFVGKVHTDEL 82
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+NG N H+ TP N AAP ++PGGSSSG+A AV+ DL D +LG DT G VR P++ CG
Sbjct: 83 AFSMNGRNAHFGTPRNGAAPDRIPGGSSSGSAAAVSNDLADIALGTDTGGSVRTPASHCG 142
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFAAQRSPRQIII 235
++G RP++G +S ++P+S + DT GWFARDP + VG VLL + +PR ++
Sbjct: 143 LIGLRPTHGRISLADVMPLSPTFDTCGWFARDPGVFARVGEVLLGEDSVVLPENPRAMVA 202
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
AD +L + A RV V + ++ G LG K S+ + L
Sbjct: 203 AD----VLALLAPRVQAVFCATLDRFAG-------VLGTPQPVKTASV-----SFEALFW 246
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R IQ Y+ +H E I L P ++ ++ ++ ++R R +
Sbjct: 247 AFRFIQGYQAWQSHGEHIRRHDFQLGPGVAERFAWSATVTPQQMQQHSAVRWSFRDDFAR 306
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
LL DG+L+ PT P+L E EDY+N+A +L +A +SG Q+++PL D P
Sbjct: 307 LLGADGVLLLPTVPDIAPRLIDPEPALEDYRNQAVRMLCLAGLSGLPQISLPLMRLDDAP 366
Query: 416 TSVSFIARHGGDRFLL 431
+S I G DR L+
Sbjct: 367 FGLSLIGPPGSDRSLV 382
>gi|317127954|ref|YP_004094236.1| amidase [Bacillus cellulosilyticus DSM 2522]
gi|315472902|gb|ADU29505.1| Amidase [Bacillus cellulosilyticus DSM 2522]
Length = 395
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 207/405 (51%), Gaps = 35/405 (8%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR 92
DF AF L + Q L G++ A+ D+F I+G + G G+P+W RTH A +
Sbjct: 2 DFNAFNRSLNIHRSNQ-------GRLKGVTVAIKDVFSIKGLIAGAGNPDWERTHEPAQK 54
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
+ VV L+E G T G T DE +S+NG N HY TP NP A ++PGGSSSG+AVAV+
Sbjct: 55 NAEVVEQLLEEGVTITGTTHTDELMFSLNGENYHYGTPVNPTAQERVPGGSSSGSAVAVS 114
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A LVD +G DT G VR+PS++CGI GFRP++GAVS G+IP+++ DTVGW + ++L
Sbjct: 115 AGLVDVGIGTDTGGSVRIPSSYCGIYGFRPTHGAVSTEGLIPLASQFDTVGWMTKSSELL 174
Query: 213 RHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGR------QV 266
VG L+ P + S ++I+ +D ++ + D + K + + G
Sbjct: 175 YDVGLTLINQP-DYKTSFTKLIVPED---IVSLANDECTETFTKHLDGMKGNFDKVITTT 230
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
L E + +F N R +Q YE H +WI+ P PDI
Sbjct: 231 LATEGIETWF------------------NTFRTLQGYEVWQTHGDWIKETNPKFGPDIED 272
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
I E +E + R ++++ + L+ D I++ PT P L G+ + E+ +
Sbjct: 273 RFNWASTIKEEDVEKARLKRAQIQNRVQELIDQDSIVLMPTAPGVAPYLNGRGEVLENQR 332
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
R + I+ + G Q+++P+ + + P +S IA D LL
Sbjct: 333 KRMLLMTCISGLLGYPQLSLPVMHINGIPVGISMIAAKNQDLKLL 377
>gi|377807550|ref|YP_004978742.1| amidase [Burkholderia sp. YI23]
gi|357938747|gb|AET92304.1| Amidase [Burkholderia sp. YI23]
Length = 401
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 192/404 (47%), Gaps = 19/404 (4%)
Query: 35 GAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTS 94
GAF+ PP LPP+ L L AV D+FDI G TG G+P W A+RT+
Sbjct: 13 GAFVADGFGSLPPAALPPRTGDRLATLRLAVKDVFDIGGLRTGGGNPVWRDQQPVAARTA 72
Query: 95 TVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAAD 154
V L+E GA +GKTV DE YS+ G N HY TP NPA P++MPGGSSSG+ VAVAA
Sbjct: 73 LAVRALLEEGAQWVGKTVTDELTYSLAGVNAHYGTPVNPADPARMPGGSSSGSVVAVAAR 132
Query: 155 LVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRH 214
D +LG D G VR+P+++CG+ G RP++G ++ G + ++ S DTVGWFARDP L
Sbjct: 133 HADVALGTDCGGSVRLPASYCGVWGMRPTHGRIATDGCLTLAHSFDTVGWFARDPHTLAL 192
Query: 215 VGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE 274
+ VL Q ++ DD + +P + ++ + + R E LGE
Sbjct: 193 MFEVLAQ----------SVVGPDDDAFAVHVPRN----LLACADAPVAARFEASLEALGE 238
Query: 275 YFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
P + + R++Q E + W + D+ A L I
Sbjct: 239 RASFVAP-----RASLPDWAQAFRVLQAGEIAQRYGAWAREHSASFGADVGARFAMSLTI 293
Query: 335 SETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS 394
+ I + +R E A++ L + PT P+ + + RA +L
Sbjct: 294 TREQIAEAQRVRIEAIHAMAEALPHGTYWLVPTVPGAAPRTDASAETVDHTRARAQQMLC 353
Query: 395 IASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
+A ++G QV++P P VS I G D +L + ++
Sbjct: 354 VAGLAGLPQVSMPWTRIGGAPVGVSVIGARGADEGVLRVARAVH 397
>gi|375132337|ref|YP_005048745.1| amidase [Vibrio furnissii NCTC 11218]
gi|315181512|gb|ADT88425.1| Amidase [Vibrio furnissii NCTC 11218]
Length = 393
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 203/397 (51%), Gaps = 25/397 (6%)
Query: 47 PQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGAT 106
P+ LP A L+G F DLFD+EGY TG G+P W +TH A+ TS +++ L+ GA
Sbjct: 13 PETLPATAQGTLSGTRFVFKDLFDVEGYATGAGNPTWLKTHQIATATSPLITALLGQGAE 72
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
C+G+ DE AYS+NG N HY TP NP AP+ +PGGSSSG+AVAVA + DF++G DT G
Sbjct: 73 CVGRVQTDELAYSLNGQNSHYGTPINPKAPNCIPGGSSSGSAVAVANEECDFAIGTDTGG 132
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA 226
+RVP+++CG+ G RP+ G + ++ S DT G F RD +++R V VL+ +
Sbjct: 133 SIRVPASYCGLFGLRPTLGTLDLSHCFELAKSFDTAGIFTRDLRLMRDVWSVLVARRQSG 192
Query: 227 QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+R R + D Q V+ + Q + + E + + G+
Sbjct: 193 ERVTR-------------VYLDAQCQAVMSAARLECLSQQCQRAGI-EIIQGHILAQNGW 238
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVI----ENC 342
T+ L + R IQ +E +H+ W+ +LDP IGE +E + T+ ++
Sbjct: 239 SLTD--LSLLFRTIQGFEIIEHHDMWLTQYGDSLDPS----IGERVEWARTITCEQYDHA 292
Query: 343 KSIRNEMRSAISSLLKDDGIL-VTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC 401
K + + + I + LK L PTT PP L Y+++ L SIA +SG
Sbjct: 293 KGRQQDFQQQILTHLKQQRCLWAIPTTPSGPPSLTMPADELAVYRSQLMGLTSIAGLSGL 352
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
Q+ + + + P +S + + LL T + ++
Sbjct: 353 PQLHLSMEELLEGPCGISLMGLPHQEETLLVTGEAVH 389
>gi|91779038|ref|YP_554246.1| amidase [Burkholderia xenovorans LB400]
gi|91691698|gb|ABE34896.1| Putative amidase [Burkholderia xenovorans LB400]
Length = 405
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 197/409 (48%), Gaps = 19/409 (4%)
Query: 35 GAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTS 94
GAF+ P LPP+ L G S AV D+FDI G TG G+ W A+RT+
Sbjct: 13 GAFVADGFNALPAAALPPRTGTRLVGRSLAVKDVFDIAGLRTGSGNLAWRAAQPVAARTA 72
Query: 95 TVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAAD 154
V L+E GA IGKT+ DE YS+ G N HY TP NPA P+++PGGSSSG+AVAVAA
Sbjct: 73 LAVRALLEEGAQWIGKTLTDELTYSLAGVNAHYGTPVNPADPARIPGGSSSGSAVAVAAQ 132
Query: 155 LVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRH 214
D ++G D G VR+P+++CGI G R ++G ++ G + ++ S DTVGWFARD L
Sbjct: 133 HADIAIGTDCGGSVRLPASYCGIWGIRATHGRIAGDGCLTLAHSFDTVGWFARDAHTLAD 192
Query: 215 VGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE 274
V VL R I+ DD L +P ++ + E++ R + LG+
Sbjct: 193 VFEVL----------ARSIVTWDDEPFTLHVPR----HLLACADEEVATRFEASLQALGD 238
Query: 275 YFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
P + + R++Q E + W + D+ A L I
Sbjct: 239 NVSFVSPD-----ASLAQWAQAFRVLQAAEIAQRYGHWAREHASSFGADVGARFAASLTI 293
Query: 335 SETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS 394
+ + + + +R + A++ L + PT P+ + + R+ +L
Sbjct: 294 TREQVADAQRVRVQANRAMAEALAPGTYWLVPTVPGVAPRADASAQAVDHTRARSQQMLC 353
Query: 395 IASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
+A ++G QV++P D P +S I G D +L + ++ ++++
Sbjct: 354 VAGLAGLPQVSMPWTTIDGAPVGMSVIGGRGTDEGVLRVARTVHEAMRK 402
>gi|409407551|ref|ZP_11256002.1| hypothetical protein GWL_31560 [Herbaspirillum sp. GW103]
gi|386433302|gb|EIJ46128.1| hypothetical protein GWL_31560 [Herbaspirillum sp. GW103]
Length = 412
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 196/389 (50%), Gaps = 22/389 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL FA DLFD+ G+ TG G+P+W R+H R++ +V L++ GAT +GKT+ DE
Sbjct: 40 PLAGLRFAAKDLFDVAGHPTGAGNPDWLRSHPIPMRSNALVGQLLQAGATLVGKTLTDEL 99
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYSI+G N HY TP N AAP ++PGGSSSG+A AVAA L DF+LG DT G RVP+++CG
Sbjct: 100 AYSIHGDNHHYGTPVNSAAPDRVPGGSSSGSAAAVAARLCDFALGTDTGGSTRVPASYCG 159
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G R S+G +S + P+ S DT W A DP VG VL LP R++++
Sbjct: 160 VWGLRTSFGLLSTASMAPLCPSFDTATWLAHDPDTFERVGQVL--LPKTGSLQVRKVLLP 217
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL-KN 295
D EL + VVQ V + L+ E GE+ GEL K
Sbjct: 218 FDLLELAEPEFQPVVQRVYDA---------LRSELPGEHMR--------MSGEEGELEKW 260
Query: 296 VMRLIQRYEFK--NNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
M I+ F H WI S +P + A IS + ++ +R +
Sbjct: 261 RMAYIKASAFDAWQCHGAWISSARPVFGSAVQARWDMAQHISADTARAAREKQDLVRHRV 320
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
SLL DG+ V P+ + P ++ + R F L +A ++G QV++P
Sbjct: 321 RSLLGADGVAVMPSASSVAPLRDASAAAIDEVRARTFGLTCVAGLAGLPQVSMPFTTPAG 380
Query: 414 CPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
P VS + G D L+ ++ +LQ
Sbjct: 381 LPIGVSLLGPAGSDLALIGLATRLWRNLQ 409
>gi|326793479|ref|YP_004311299.1| amidase [Marinomonas mediterranea MMB-1]
gi|326544243|gb|ADZ89463.1| Amidase [Marinomonas mediterranea MMB-1]
Length = 401
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 192/377 (50%), Gaps = 25/377 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ AV DLF I G T G+P W TH S+T++ V TL + GA GKT+ DE
Sbjct: 34 PLTGMRLAVKDLFHIAGLPTSAGNPTWLATHETPSQTASSVQTLFDNGACFCGKTITDEL 93
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+NG N HY TP NP P ++PGGS+SG+AVAVA+D D LG DT G +RVP+++ G
Sbjct: 94 AYSLNGQNIHYGTPCNPTNPDRLPGGSTSGSAVAVASDFADIGLGTDTGGSIRVPASYNG 153
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP--RQII 234
+ G RP++G ++ G++P++ S DTVGW A+D L + LL A++ S ++I+
Sbjct: 154 LFGLRPTHGVIAVDGLVPLAPSFDTVGWLAQDLDHLEATANALL----ASKHSETIQKIL 209
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
IAD+ ++Q V + + Q+ N E +S L + +
Sbjct: 210 IADN-----------LIQSVEHANQ--IQTQLDTWLNNSEKTESLEIDLDAWKAS----- 251
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
R +Q E H EW+ P + PDI IS ++ R+ I
Sbjct: 252 ETFRTLQGAEILEQHGEWLAEHNPIIAPDIRMRFNWCKSISSDDQKHAAIQRDTFTRWID 311
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
S LK IL+ PTT P L + DY+ +L +IA ++G Q+ +P+ D
Sbjct: 312 SELK-GAILIIPTTPGRSPLLSTPDDELADYRIHLMNLTAIAGLAGLPQLHLPVCNIDGA 370
Query: 415 PTSVSFIARHGGDRFLL 431
P +S I D L+
Sbjct: 371 PCGLSLIGPKNSDLQLI 387
>gi|333909465|ref|YP_004483051.1| Amidase [Marinomonas posidonica IVIA-Po-181]
gi|333479471|gb|AEF56132.1| Amidase [Marinomonas posidonica IVIA-Po-181]
Length = 397
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 204/388 (52%), Gaps = 30/388 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
LTGL AV DLF ++G T G+P W TH + T+ V TL+ GA +GKT+ DE A
Sbjct: 30 LTGLRLAVKDLFHMQGLPTTAGNPTWLATHPTPNSTAPSVVTLMANGAEFVGKTITDELA 89
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP NP P+++PGGS+SG+AVAV+ L D LG DT G +RVP+++ G+
Sbjct: 90 YSLNGQNIHYGTPENPVTPNRLPGGSTSGSAVAVSLGLADIGLGTDTGGSIRVPASYQGL 149
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLP---FAAQRSPRQII 234
G RP++GA+S ++ ++ S DTVGW + +L VLL L ++ + ++++
Sbjct: 150 FGLRPTHGAISAEHLVALAPSFDTVGWVTKHLDVLEKTAQVLLPLSTSDWSKNNTFKRVL 209
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--HKTNGE 292
+ D+ F ++ + +Q V+ + +H D K+ S + F +
Sbjct: 210 VVDNLFR--QVAHQQALQDVLAA---------WRH-------DGKLSSEERFVIDTDKWQ 251
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
R +Q E + H +WI V DPD + +I + + +T+ E +S R+
Sbjct: 252 TSATFRTLQGREIQREHGQWIAEV----DPDFATDIAQRFDWCQTLSEADESAALRQRAL 307
Query: 353 ISSLLKD--DG-ILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
+ L D DG +L+ PTT P E +Y+++ L +IA ++G Q+ +P+
Sbjct: 308 FTEWLTDALDGAVLLLPTTPGLAPLFSASEEDLAEYRHQLMDLTAIAGLAGLPQLHLPVC 367
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+ P +S + G D L++ +++
Sbjct: 368 ELEGAPCGLSLVGPKGSDLALIEYAKSL 395
>gi|145589367|ref|YP_001155964.1| amidase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047773|gb|ABP34400.1| Amidase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 392
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 195/381 (51%), Gaps = 23/381 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL L+F V D+FDI T FG P W +H + T+T +S+LV+ GA+ +GKT DE
Sbjct: 28 PLKDLTFGVKDIFDIANIPTAFGSPAWLNSHPIPTETATFISSLVDAGASLVGKTHTDEL 87
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
YSI G N HY TP N AP+++PGGSSSG+A AVAA+LVDF++G DT G VR P++FCG
Sbjct: 88 TYSILGMNAHYGTPLNTVAPNRVPGGSSSGSASAVAANLVDFAIGSDTGGSVRAPASFCG 147
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I GFRP++G +S P++ S DT+GWFARDP+IL VG VL S +
Sbjct: 148 IYGFRPTHGRISLERARPLAKSFDTLGWFARDPEILLKVGEVLFNESRTRNASASYFFL- 206
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN- 295
+ F+LL + Q I GR + +G N ELK+
Sbjct: 207 KEAFDLLPPSLSKQAQEAISLR---LGRTQIPTVEIG----------------NCELKDW 247
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
R+IQ E H W + P + I+E +S R ++ + +
Sbjct: 248 AETFRIIQAGEIWEQHGNWASEHLSEMGPGVKDRFEAARSITEDQKIKARSDREKVIAKM 307
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ LL ++ L+ PT P+L +D++ +F LL IA + G QVT+PL
Sbjct: 308 AQLLSENTYLILPTVFDIAPRLDSSAKEFDDFRKNSFQLLCIAGLCGLPQVTLPLLTIQD 367
Query: 414 CPTSVSFIARHGGDRFLLDTV 434
P VS +A+ D LL +
Sbjct: 368 APFGVSILAKQNMDMSLLGEI 388
>gi|192360244|ref|YP_001981097.1| amidase [Cellvibrio japonicus Ueda107]
gi|190686409|gb|ACE84087.1| amidase [Cellvibrio japonicus Ueda107]
Length = 393
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 186/386 (48%), Gaps = 28/386 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+GL V DLF I G T G+P+W RTH +TS VV L+ GA IGKT DE A
Sbjct: 24 LSGLRLGVKDLFHIAGLPTAAGNPDWLRTHPVPRQTSPVVEALLAAGAQLIGKTQTDELA 83
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY P NP P ++PGGSSSG+AVAVAA +D LG DT G +RVP+++ G+
Sbjct: 84 YSLNGLNSHYGAPRNPVTPERLPGGSSSGSAVAVAAQEIDIGLGTDTGGSIRVPASYNGL 143
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
LG R S+G + ++P++ + DTVGW RD + L+ VG VLL
Sbjct: 144 LGIRTSHGIIPSDHMVPLAPAFDTVGWLTRDAQTLQAVGEVLLP---------------- 187
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF------HKTNG 291
L + A + +V + E L ++ DS+ P L+ F
Sbjct: 188 ---PSLSVSARKPWRVSLLLPE--MNGAALWTSAHQQWLDSQ-PVLQVFKPLFVKQAWLA 241
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
R++Q YE H WI+ +P PDI A ++++ + + +R ++
Sbjct: 242 RASETFRVLQGYEIWCTHGVWIQQQQPRFAPDIQARFQWCSQLTQDQQQQAEQMRVQLCR 301
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
I ++V PTT P P LG + Y+ + L S A ++ Q+ +P+
Sbjct: 302 EIEHWFDQVDLVVMPTTPGPAPLLGADAAWMDAYRRQLMGLTSPAGLARLPQIHLPVLQQ 361
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNM 437
P VS + H D+ LL +
Sbjct: 362 QGAPVGVSLLGPHRSDKALLQVATEL 387
>gi|388256728|ref|ZP_10133909.1| amidase [Cellvibrio sp. BR]
gi|387940428|gb|EIK46978.1| amidase [Cellvibrio sp. BR]
Length = 397
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 190/378 (50%), Gaps = 23/378 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL V DLF I G T G+P+W +H +TS VV+ L+ G +GKT DE A
Sbjct: 28 LAGLRLGVKDLFHIAGLPTAAGNPDWLASHPTPEQTSPVVTQLLNAGTELVGKTQTDELA 87
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY P NPA P +PGGSSSG+AVAVAA +D LG DT G +RVP+++ G+
Sbjct: 88 YSLNGLNIHYGAPINPACPECLPGGSSSGSAVAVAAGDIDIGLGTDTGGSIRVPASYNGL 147
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G R S+G +S ++P++ DTVGW RD + L VG VLL A + R + A
Sbjct: 148 FGIRTSHGLISSEQMVPLAPLFDTVGWLTRDAETLAQVGEVLLPAELAPRFPHRSLRAA- 206
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL---K 294
L +P + V+ S E + LK + L +P++K + L
Sbjct: 207 -----LLLP---LQNGVLWSPEH---QAWLKQQTL-------LPAVKPILLNSDWLTRAS 248
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
R +Q H EWI + +P PDI +++ ++ R +++ I
Sbjct: 249 QCFRTLQGRAIWQTHGEWITANQPTFAPDIHTRFQWCATLTDADQTAAETERASLQADIE 308
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK- 413
D +++ PTT P P LG + Y+++ L + A ++G QV +P+ ++
Sbjct: 309 GWFTDVDLILLPTTPGPAPLLGADSQWMDSYRSQLMGLTAPAGLAGLPQVHLPVLRDEQG 368
Query: 414 CPTSVSFIARHGGDRFLL 431
P VS + R G D+ LL
Sbjct: 369 APYGVSLLGRRGDDKALL 386
>gi|88798441|ref|ZP_01114026.1| amidase [Reinekea blandensis MED297]
gi|88778881|gb|EAR10071.1| amidase [Reinekea sp. MED297]
Length = 404
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 194/396 (48%), Gaps = 50/396 (12%)
Query: 56 HP---LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
HP L G+ AV DLF + GY G+P+W RTH A++T+ V L++ G+ G T
Sbjct: 25 HPKGALAGVRLAVKDLFAVAGYTNTAGNPDWLRTHGPATKTADAVQRLMDAGSVFCGFTQ 84
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
DE AY++ G N+H+ NP P GGSS G+A AV + D LG DT G +RVP+
Sbjct: 85 TDELAYALEGNNEHFGKSENPKLPGHACGGSSMGSAAAVGSRWADVGLGTDTGGSIRVPA 144
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
++CG+ G RPS+G VS G+I ++ DTVGWFA D +LR VG VLL
Sbjct: 145 SYCGLYGLRPSHGVVSTDGLIGLAPRFDTVGWFAGDAALLRQVGEVLL------------ 192
Query: 233 IIIADDCFELLKIPADRVV-QVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG-FHKTN 290
PADR V + S + Q L H GE ++ + L G F +T
Sbjct: 193 -------------PADRPVGKPDTLSVDPYLMSQALGH--CGEALNTVIDRLSGVFGQTR 237
Query: 291 ----------GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIE 340
L +V R++Q + H +W+ + +P I+ + L +++ +E
Sbjct: 238 TVDLGLQQRFANLNDVFRVLQGRAIAHYHGDWLNATQPTFSKPITERLRMALALTDAEVE 297
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG 400
+S R + + L DDG+L+ PTT PKLG E SE + + +L +I+ ++G
Sbjct: 298 QAESQRQAFHAHVQEQLGDDGVLLLPTTPSTAPKLG--EDTSE-LRPKLLTLTAISGLTG 354
Query: 401 CCQVTVPL-----GYYDKCPTSVSFIARHGGDRFLL 431
QV +PL ++ P S + G D LL
Sbjct: 355 SAQVHLPLMPLARKHHPSRPYGFSLLMPSGQDHTLL 390
>gi|154247978|ref|YP_001418936.1| amidase [Xanthobacter autotrophicus Py2]
gi|154162063|gb|ABS69279.1| Amidase [Xanthobacter autotrophicus Py2]
Length = 393
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 200/399 (50%), Gaps = 26/399 (6%)
Query: 32 QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
+ GAFI +L P P PL GL+FAV D+ D+ G TG GHP+W TH A+
Sbjct: 5 EALGAFIPGPRLARPGAPA-----GPLAGLTFAVKDVMDVAGTSTGNGHPDWLTTHPPAA 59
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
R++ V L++ GA+ GKT+ DE YS+ G N HY TP NPAAP ++PGGSSSG+A A
Sbjct: 60 RSAVAVDRLLDAGASLAGKTIADELCYSLTGENVHYGTPLNPAAPDRVPGGSSSGSASAT 119
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
A +VDF+LG D G VRVPS++CG+ G RP++G + G+ P + S D VGWFARD +
Sbjct: 120 AGSVVDFALGTDCGGSVRVPSSYCGLFGMRPTHGRIPLEGVAPFAPSFDCVGWFARDAGL 179
Query: 212 LRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
L VG VLL A +P ++ L P + + ++ L L E
Sbjct: 180 LERVGRVLL-----ADAAPAPLLTR------LLAPREAFAMLSPEAAAALAPALRLAQET 228
Query: 272 L--GEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIG 329
+ G L + T R +Q E + WIE+V+PA P +
Sbjct: 229 IAPGAEIALAPDGLDAWSAT-------FRTLQAAEIWASVGPWIEAVRPAFGPGVKERFD 281
Query: 330 EMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDY-QNR 388
IS + +E + R +R+ + LL+ + PT P P G E ++
Sbjct: 282 AARTISPSAVEVACAHRAAIRARLDDLLQPGTAFLMPTVPRPAPLRGMATAQVEVVTRHL 341
Query: 389 AFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGD 427
A +LL IA + G QV++PL + P +S + G D
Sbjct: 342 AMNLLCIAGLGGLPQVSLPLARLEGVPFGLSLVGPAGSD 380
>gi|215272287|dbj|BAG84638.1| indole-3-acetamide hydrolase [Nicotiana tabacum]
Length = 167
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/167 (59%), Positives = 129/167 (77%), Gaps = 5/167 (2%)
Query: 33 DFGAFIEKLQLLPPPQPLPPKAPH-PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
++GA IEK L QP+ + PL GL+FAV D+FD+EG++TGFG+P+WA+THSAA+
Sbjct: 5 EYGALIEKFTL----QPICSSSEQLPLNGLTFAVKDIFDVEGHITGFGNPDWAKTHSAAT 60
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
T+T V TL++ GATCI KTV+DE AYSING N HY TP NP +P ++PGGSSSG+AVAV
Sbjct: 61 STATTVLTLLKAGATCIAKTVMDEMAYSINGENVHYGTPVNPVSPDRVPGGSSSGSAVAV 120
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTS 198
A LVDFSLG DT G VRVP+++CGI G RPS+G VS +G+ P++ S
Sbjct: 121 GAKLVDFSLGTDTGGSVRVPASYCGIYGIRPSHGVVSTVGVTPMAQS 167
>gi|385205231|ref|ZP_10032101.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
gi|385185122|gb|EIF34396.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
Length = 405
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 193/410 (47%), Gaps = 31/410 (7%)
Query: 35 GAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTS 94
GAF+ P LPP+ L G S AV D+FDI G TG G+ W A+RT+
Sbjct: 13 GAFVADGFDALPAAALPPRTGTKLVGRSLAVKDVFDIAGLRTGSGNLAWRAAQPVAARTA 72
Query: 95 TVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAAD 154
VV L+E G IGKT+ DE YS+ G N HY TP NPA +++PGGSSSG+AVAVAA
Sbjct: 73 LVVRALLEEGVQWIGKTLTDELTYSLAGVNAHYGTPVNPADAARIPGGSSSGSAVAVAAQ 132
Query: 155 LVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRH 214
D ++G D G VR+P+++CGI G R ++G ++ G + ++ S DTVGWFARD + L
Sbjct: 133 HADIAMGTDCGGSVRLPASYCGIWGMRATHGRIAGDGCLTLAHSFDTVGWFARDARTLAD 192
Query: 215 VGHVLLQLPFAAQRSPRQIIIADDCFELLKIP------ADRVVQVVIKSTEKLFGRQVLK 268
V VL R I+ D L +P AD V +++ + G V
Sbjct: 193 VFEVL----------ARSIVTWDGEPFTLHVPRNLLACADAEVATRFEASLQALGDNV-- 240
Query: 269 HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
F S SL + R++Q E + W + D+ A
Sbjct: 241 ------SFVSPDASLA-------QWAQAFRVLQAAEIAQRYGHWAREHASSFGADVGARF 287
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNR 388
L ++ I + + +R E A++ L + PT P+ + + R
Sbjct: 288 AASLTVTREQIADAQRVRVEANRAMAEALAPGTYWLVPTVPGVAPRADASAQAVDHTRAR 347
Query: 389 AFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
+ +L +A ++G QV++P +D P +S I G D +L + ++
Sbjct: 348 SQQMLCVAGLAGLPQVSMPWTTFDGAPVGMSVIGGRGTDEGVLRVARIVH 397
>gi|187919949|ref|YP_001888980.1| amidase [Burkholderia phytofirmans PsJN]
gi|187718387|gb|ACD19610.1| Amidase [Burkholderia phytofirmans PsJN]
Length = 399
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 201/392 (51%), Gaps = 22/392 (5%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL GL FAV DL D+ G TG G+P+W TH+AA + V L+ GAT GKT+
Sbjct: 16 ASGPLDGLRFAVKDLIDVAGEPTGGGNPDWLSTHAAARVHAPCVDALLAAGATLDGKTIT 75
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DE AYS+ G N HY TP NP P +PGGSSSG+A AVA VDF+LG DT G VRVP+A
Sbjct: 76 DELAYSLEGENHHYGTPLNPRWPQALPGGSSSGSASAVANGDVDFALGTDTGGSVRVPAA 135
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCG+ G RPS+GA++ G++P + DTVGWFAR +L+ VG VLL +
Sbjct: 136 FCGLFGMRPSHGAIALDGVLPFAPCFDTVGWFARSIAVLQAVGDVLL-----------PV 184
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG-FHKTNGE 292
+ D L + V + E+ + L E ++ SL+ F
Sbjct: 185 MSRGDGASLNRPVRLTRVAEAFAARERNEPDDAARLTALAESLGAQ--SLRNVFSGGGAR 242
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
+ +Q E + EWI S +P P I+ + + +++ E+RSA
Sbjct: 243 WLACYQAVQDLEIDASLGEWIRSTQPRFGPSIAPRFARLETLDRQRATQWRTVLQELRSA 302
Query: 353 ISSLLKDD--GILVTPTTAYPPPKLGGKEMLSE---DYQNRAFSLLSIASVSGCCQVTVP 407
+ SL K++ +LV PTT P L K+ E + + ++ S+A+ G Q+T+P
Sbjct: 303 LDSLFKEEENTVLVMPTT---PVSLLRKDASGEAIGRFYEDSLTMNSLAAFGGLPQITLP 359
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
P ++S I G DR LL +++Y+
Sbjct: 360 FNDALDRPLALSLIGARGSDRALLSLARDLYS 391
>gi|119946077|ref|YP_943757.1| amidase [Psychromonas ingrahamii 37]
gi|119864681|gb|ABM04158.1| Amidase [Psychromonas ingrahamii 37]
Length = 398
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 195/392 (49%), Gaps = 17/392 (4%)
Query: 47 PQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGAT 106
PQ L P + L+G +F DLFD++GYVTG G+P W TH+ A +TS ++ L+ GA
Sbjct: 17 PQRLLPISEGLLSGYTFVFKDLFDVKGYVTGAGNPTWLETHNMAEQTSPLILALLSQGAN 76
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
C+G+ DE AYS+NG N HY TP NP AP+ +PGGSSSG+AVAVA+ DFS+G DT G
Sbjct: 77 CVGRVQSDELAYSLNGQNIHYGTPVNPIAPNCLPGGSSSGSAVAVASKDADFSIGTDTGG 136
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA 226
VRVP+++CG+ G RP+ + ++ S DT G F RD ++ V VL P
Sbjct: 137 SVRVPASYCGLYGLRPTLAKFNLEHCFELAKSFDTAGIFTRDLDLMHKVFEVLNGAPVKG 196
Query: 227 QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+ + Q + D ++ R+ ++ + E G +L + L +Y
Sbjct: 197 ESA--QTLYLDKTLA-AQLSDQRLKRLQVCCIEA--GITLLNGDFLAKY----------- 240
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
H + + + R +Q YE H EW+ +L+P I + IS K +
Sbjct: 241 HLSLEAISLLFRTVQGYEIIAKHREWLAEFGHSLEPSIYQRVEWSRTISAEQYTQAKKRQ 300
Query: 347 NEMR-SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
+ R L + G+ + PTT PP L Y++ L SIA +SG Q+
Sbjct: 301 TDFRLQLTVLLQQQGGLWLVPTTPSGPPSLSLAGDQLAKYRSNLMGLTSIAGLSGFPQLH 360
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+P+ ++ P +S + + L T Q +
Sbjct: 361 LPIKGLEEGPCGISLLGLPDSEGDLFATAQQL 392
>gi|170694812|ref|ZP_02885962.1| Amidase [Burkholderia graminis C4D1M]
gi|170140172|gb|EDT08350.1| Amidase [Burkholderia graminis C4D1M]
Length = 405
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 194/404 (48%), Gaps = 31/404 (7%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P LP + L G AV D+FD+ G TG G+ W A+RT+ V L+E GA
Sbjct: 24 PAAALPLRTGGKLVGERLAVKDVFDVAGLRTGSGNLAWRDEQPVATRTALAVRALLEEGA 83
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKTV DE YS+ G N HY TP NP+ P+++PGGSSSG+ VAVAA D +LG D
Sbjct: 84 QWLGKTVTDELTYSLAGVNAHYGTPVNPSDPARIPGGSSSGSVVAVAAGHADIALGTDCG 143
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR+P+++CG+ G RP++G ++ G + ++ S DTVGWFARD ++L VL
Sbjct: 144 GSVRLPASYCGVWGMRPTHGRIAADGCLTLAHSFDTVGWFARDARLLADTFEVL------ 197
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
R ++ AD L +P + + V ++ F++ +P+L
Sbjct: 198 ----ARSLVPADQAAFALHVPRNLLACV---------------DPDVAARFEASLPALGE 238
Query: 286 FHK------TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVI 339
+ + + R++Q E + +W + D+ A L I+ I
Sbjct: 239 RARFVAPEASLADWAQAFRVLQAAEIAQRYGQWAREHAASFGADVGARFAMSLGITREQI 298
Query: 340 ENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVS 399
+ + IR E A++ L + + PT P+ + + R+ +L A ++
Sbjct: 299 ADAQRIRAEAIRAMAHALPERTYWLVPTVPGVAPRADASAQTLDHVRARSQQMLCAAGLA 358
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
G QV++P +D P +S I G D +L + ++ +++
Sbjct: 359 GLPQVSMPWTRFDGVPVGLSVIGARGADEGVLAAARAVHDVMRD 402
>gi|423683871|ref|ZP_17658710.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
licheniformis WX-02]
gi|383440645|gb|EID48420.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
licheniformis WX-02]
Length = 392
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 208/415 (50%), Gaps = 26/415 (6%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
++ D+ AFI + + PP A L LSFAV D+F +EG+ G+P+W RTH
Sbjct: 1 MEHDWSAFINRDLTVDPPS-----AEGSLKKLSFAVKDVFAVEGHANAAGNPDWLRTHEP 55
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
A + + V L+ GA G DE YS++G N HY TP NP A ++PGGSSSG+AV
Sbjct: 56 AEKNAEAVDLLLREGARLKGAAHTDELMYSLDGENVHYGTPVNPCAMDKIPGGSSSGSAV 115
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
A A+ + DF+LG DT G VR+PS++CGI GFRP++G VS G+IP++ S DTVGW ++D
Sbjct: 116 AAASGMTDFALGTDTGGSVRIPSSYCGIFGFRPTHGEVSVDGVIPLAKSFDTVGWMSKDI 175
Query: 210 KILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKH 269
+L G VLL A ++ + + LL+ +DR QV + + G
Sbjct: 176 GVLHAAGRVLLSGQEEAGACFNRVYFEKEAWSLLE-ESDR-TQVYAYALGLIDGE----- 228
Query: 270 ENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA--E 327
FD V + G E R++Q E H WIE P P I+ E
Sbjct: 229 ------FDWCVAADGGL----AEWAETFRVLQGLEIWEEHGAWIERTNPVFGPGIAERFE 278
Query: 328 IGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN 387
L IS+ V K R R +S L +DG+LV PT PPP G E + +
Sbjct: 279 WASSLVISDHVQAFMK--REAARKRLSEWLGEDGLLVIPTAPGPPPLRGLPENELNERRA 336
Query: 388 RAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
R L IA + G Q+TVPL + P +SFIA D LL + S Q
Sbjct: 337 RTMKLTCIAGLGGLPQITVPLPAKNGEPLGLSFIAGCKQDLKLLAWTEKHVLSPQ 391
>gi|399020129|ref|ZP_10722269.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398096139|gb|EJL86468.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 400
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 200/382 (52%), Gaps = 25/382 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+G+ FAV D+FD+ G+ TG G+P + ++ V L + GA +GKT DE
Sbjct: 26 PLSGIRFAVKDIFDVAGFPTGCGNPHMLAMSGVKTASAPSVVALAQAGARFVGKTYTDEL 85
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+NG N H+ TP N AP ++PGGSSSG+A AV+ L D +LG DT G VR P++ CG
Sbjct: 86 AFSMNGKNAHFGTPRNGGAPDRIPGGSSSGSASAVSNGLADVALGTDTGGSVRAPASHCG 145
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ-----LPFAAQRSPR 231
++G RP++ VS G + ++ S DT GWFARD VG VLL+ LP A P
Sbjct: 146 LIGLRPTHARVSLKGCMDLAPSFDTCGWFARDIDSFSRVGEVLLREDTCLLPDGAPSMP- 204
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSK--VPSLKGFHKT 289
Q+++A D LL+ RV V +++ E+L G +G K PS + +
Sbjct: 205 QVLVAADVLALLE---PRVQAVFMQTLERLAG-------VIGTPLPVKTATPSFEALYWA 254
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
R IQ YE +H E I L P ++ +I+ +E ++R+
Sbjct: 255 -------FRYIQGYEAWQSHGETIVRHDLQLGPGVAERFAWSSQITPQQMEEHSNVRDRF 307
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
R LL D ++V PT P L E + E+Y+N+A +L +A +SGC Q+++PL
Sbjct: 308 REDFLRLLGSDRVIVLPTMPDVAPLLSESEQVLENYRNQAVRMLCLAGLSGCPQISLPLM 367
Query: 410 YYDKCPTSVSFIARHGGDRFLL 431
D P S I G D+ L+
Sbjct: 368 TLDGAPFGFSIIGPLGSDQALI 389
>gi|351731780|ref|ZP_08949471.1| amidase [Acidovorax radicis N35]
Length = 394
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 197/375 (52%), Gaps = 17/375 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL FA DLFD+ GY TG G+P +RT+ V L++ GA +GKTV DE
Sbjct: 25 PLSGLCFAAKDLFDVAGYPTGGGNPVVLALSGTKTRTAPTVQKLLDAGARFVGKTVTDEL 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+NG N H+ P N AAP ++ GGSSSG+A AV++ L DF+LG DT G VR P+ CG
Sbjct: 85 AFSMNGNNAHFGAPLNGAAPDRITGGSSSGSAAAVSSGLCDFALGTDTGGSVRAPANHCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR-QIII 235
+ G RP++G VS G + ++ SLDT GWFARD + V VLL AA PR ++++
Sbjct: 145 LYGLRPTHGRVSLEGAMDLAPSLDTCGWFARDVQTFARVADVLLG-DDAAPLPPRVRLLL 203
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
D + LL +Q + L G + L E FD+ +
Sbjct: 204 PTDVWALLDPTVVGALQGATQQVTDLLGPSQPANAVL-ESFDT--------------MYW 248
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R +Q E IE P L P ++ ++++ + + ++ R+ R+ +++
Sbjct: 249 NFRYVQGREAWMTDGPLIERYAPPLGPGVAERFAWSRDVTDGQVASARAFRDRYRAHLAA 308
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
LL DG+L+ PT P E EDY+NRA +L IA +SG Q+++PL D P
Sbjct: 309 LLGRDGVLLLPTMPDIAPLRTAPESSLEDYRNRAIQMLCIAGLSGFPQLSMPLARRDGAP 368
Query: 416 TSVSFIARHGGDRFL 430
+S + G DR L
Sbjct: 369 LGLSLLGPAGSDRSL 383
>gi|339627640|ref|YP_004719283.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfobacillus
acidophilus TPY]
gi|379007997|ref|YP_005257448.1| amidase [Sulfobacillus acidophilus DSM 10332]
gi|339285429|gb|AEJ39540.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfobacillus
acidophilus TPY]
gi|361054259|gb|AEW05776.1| Amidase [Sulfobacillus acidophilus DSM 10332]
Length = 399
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 215/414 (51%), Gaps = 29/414 (7%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
+K + AFI+ P LPP PL+G FA D+F ++GY T G+P+W RTH
Sbjct: 1 MKDTWHAFID------PSCTLPPIQDGPLSGTRFAAKDVFAVKGYPTSGGNPDWFRTHPP 54
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
+ T+ + L++ GA GKT DE Y +NG N HY TP NP AP ++PGGSSSG+AV
Sbjct: 55 ETTTAPAILALLKAGAALDGKTHTDELMYGLNGENVHYGTPVNPKAPDRIPGGSSSGSAV 114
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AV+A +VDF++G DT G VR+P+++ GI G RP+ G + G+IP+S + DTVGWF+RDP
Sbjct: 115 AVSAGMVDFAIGTDTGGSVRIPASYTGIFGMRPTVGRTTLTGVIPLSQTFDTVGWFSRDP 174
Query: 210 KILRHVGHVLLQLPFAAQRSP---RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV 266
+L VG VLL + P R++IIA D + L++ P ++Q + + F QV
Sbjct: 175 GLLALVGSVLL----SGHSRPAQFRRVIIASDAWALMEPPYRPMLQSWVDRIVQRF-EQV 229
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ E D +GF R+IQ Y+ N EWI KP P
Sbjct: 230 EEEPIAPEGLDQWA---QGF-----------RVIQGYDIWQNFGEWITHTKPRFGPGFRE 275
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
I+ + + R +S ++ L D I++ PT P P+ + ++
Sbjct: 276 RFAWTATITVEERDMWNAKRQIWQSNLAERLGTDTIILLPTAPGPAPQRNTPLPILNAFR 335
Query: 387 NRAFSLLSIASVSGCCQVTVP-LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
+R L +IA + G Q+++P + + P +S I G D L++ VQ A
Sbjct: 336 DRVLQLTAIAGLGGLPQISLPGVVSPEGYPLGLSVIGGSGTDEALMEWVQQQMA 389
>gi|146341317|ref|YP_001206365.1| amidase [Bradyrhizobium sp. ORS 278]
gi|146194123|emb|CAL78142.1| putative amidase [Bradyrhizobium sp. ORS 278]
Length = 400
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 203/416 (48%), Gaps = 38/416 (9%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPH---PLTGLSFAVSDLFDIEGYVTGFGHPEWART 86
++ GAF+ P + ++PH PL+GLSFAV DLFD+ G VTG G+P+WA
Sbjct: 2 VQDPLGAFL--------PNAIMRRSPHRSGPLSGLSFAVKDLFDVAGDVTGCGNPDWAAC 53
Query: 87 HSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSG 146
H R + V + GAT GKT+ DE + + G N+ Y TP NP AP ++PGGSSSG
Sbjct: 54 HDTPERDAWAVDAMCCAGATLTGKTITDEISLGLLGINRFYGTPLNPRAPDRVPGGSSSG 113
Query: 147 AAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+A AVA LVD +LG D+ G VR P++FCGI G RP++G +S G++ + S DTVG+F
Sbjct: 114 SASAVAGGLVDVALGTDSGGSVRTPASFCGIYGLRPTHGRISVAGLMTQAPSFDTVGYFT 173
Query: 207 RDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV 266
RD VG VLL P A P I+IA DCF L P +Q V+
Sbjct: 174 RDALTFGRVGSVLLAEPIADGLQP-DIVIASDCFALADEPVRAALQPVVARLR------- 225
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGEL---KNVMRLIQRYEFKNNHNEWIESVKPALDPD 323
S P+ + +GEL R++Q+ EF +WI+ V P +
Sbjct: 226 -----------SVAPATEA-ALADGELLAWGRHQRVLQKSEFHATFRDWIDRVNPRFSSE 273
Query: 324 ISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPP--PKLGGKEML 381
++ + I+ + + R + +L +L PTT P G EM
Sbjct: 274 VAGAFADDGRIAPQDLATAEVFRAAASKRLDDVLDGRRMLCLPTTPILPIARDAGLSEMR 333
Query: 382 SEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+ +R L IA ++G QV +P+ P +S I GGD LL Q +
Sbjct: 334 TA--VHRIVDLTCIAGLTGLPQVNLPVATSGAVPVGLSLIGWRGGDASLLAAAQTL 387
>gi|335421114|ref|ZP_08552141.1| amidase [Salinisphaera shabanensis E1L3A]
gi|334892696|gb|EGM30925.1| amidase [Salinisphaera shabanensis E1L3A]
Length = 404
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 206/400 (51%), Gaps = 33/400 (8%)
Query: 47 PQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGAT 106
P L P L+GL FAV D+FDI G TGFG P+W +H A + + L+ G
Sbjct: 16 PAALAPTGEGVLSGLLFAVKDVFDIAGTRTGFGQPQWLASHPPADTNADCIDRLLAAGGE 75
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
+G+T+ DE YS+ G N HY P N ++ GGSSSG+A AV A LVDF+LG D G
Sbjct: 76 LVGRTISDELCYSLTGDNIHYGAPANSWGLGRLAGGSSSGSAAAVCAGLVDFALGTDCGG 135
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA 226
VRVPS++CG+LG R ++G V+ G++ ++ D +GWFARD I VG VL LP A
Sbjct: 136 SVRVPSSYCGLLGLRTTHGRVATRGLLRFASQFDCIGWFARDAHIFERVGRVL--LPDAR 193
Query: 227 QRSP-RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-------LKHENLGEYFDS 278
++ ++++IA D FE + + + + E L G Q L + L E+F++
Sbjct: 194 EQGAFKRVLIATDAFEAVDT---EIAAAFLPALETL-GAQADRMQEIQLAEDGLAEWFET 249
Query: 279 KVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV 338
R+IQ + + +W+ +P L P + I + +I+
Sbjct: 250 ------------------FRIIQAADVWDALGDWVAQTRPTLGPGVRERIEQAGQINAAQ 291
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGG-KEMLSEDYQNRAFSLLSIAS 397
+ ++ R E+ + +L+ +D ++V PTT P P G E L Y+ +A SLL A
Sbjct: 292 LREAQAHRAEIVKRLDALIGEDDVVVLPTTPRPAPPRGATDEALETTYRYQAMSLLCSAG 351
Query: 398 VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
++G Q+ +PL D P +S + R GD L++ + +
Sbjct: 352 LAGLPQMNLPLAMKDGLPLGLSIMTRRNGDMRLIELARRV 391
>gi|395007398|ref|ZP_10391148.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
gi|394314606|gb|EJE51487.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
Length = 407
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 189/397 (47%), Gaps = 32/397 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL FA D+FD+ G TG G+P W +H +R S +V L++ GAT GK V DE
Sbjct: 34 PLAGLRFAAKDVFDVAGQPTGAGNPAWLASHPVPARHSALVQQLLDVGATLCGKLVTDEL 93
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYSI+G N HY P N AAP ++PGGSSSG+ AVAA LVDF+LG DT G RVP+++CG
Sbjct: 94 AYSIHGHNLHYGMPLNSAAPERIPGGSSSGSVAAVAARLVDFALGTDTGGSTRVPASYCG 153
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFAAQRSPRQIII 235
+ G R ++G VS G++P+ S DT WFA DP V LL PFAA R+
Sbjct: 154 VWGLRTTHGLVSRAGLVPLHESFDTATWFAHDPTTFERVAQALLPATPFAALRA------ 207
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
VQ+ + E L +GE + +P +G +
Sbjct: 208 ---------------VQLQDAAAEADAEVAALL-PRVGEVLATLLP--QGVGTATAAQGS 249
Query: 296 VMRLIQR-------YEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
+ +R +E H WI + P + I+ E++ ++
Sbjct: 250 ALEDWRRHYVAWGAHEAWQAHGAWISANAPGFEAAIAGRWQAASEVTAEAAGAARAAGLA 309
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
R+ + +L+ +LV P+ A P + + + R + IA ++G QV++PL
Sbjct: 310 ARAQVRALVGSGTVLVLPSAASVAPLRSAEGAEIDAIRARTLRICCIAGLAGLPQVSLPL 369
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQA 445
P VS I G D L+ ++ +LQ+ A
Sbjct: 370 ATAGGLPAGVSLIGPAGSDLALVRLAVRVWQALQDGA 406
>gi|410621287|ref|ZP_11332136.1| amidase [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159291|dbj|GAC27510.1| amidase [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 403
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 184/387 (47%), Gaps = 19/387 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL + AV DLFDI+G T G+P+W RTH S T++ V++L++ GA GKT+ DE
Sbjct: 33 PLQNMKLAVKDLFDIKGIPTAAGNPDWLRTHPLPSNTNSTVASLIKHGAAYEGKTLTDEL 92
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+NG N HY T NP P ++PGGSSSG+AVAVAA+L D LG DT G +RVP+++ G
Sbjct: 93 AYSLNGQNIHYPTLINPVNPERLPGGSSSGSAVAVAAELADIGLGTDTGGSIRVPASYNG 152
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G R S+G + ++ ++ S DT+GW R+ L V VLL A + +
Sbjct: 153 LFGLRTSHGLIPTDNMVSLAPSFDTIGWMCRNIDDLEKVAKVLLPKESANATTHETVKF- 211
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLK--HENLGEYFDSKVPSLKGFHKTNGELK 294
C I + K E L LK EN+ + + ++
Sbjct: 212 --CIATNLISCSEQADHIEKMVEGLKSATALKLVQENI--------------NTSTYKIS 255
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
+ R +Q +E H EWI P DI I+ K + I+
Sbjct: 256 DTFRTLQGFEIWQQHGEWITRTHPTFADDIQQRFDWCKTITLQDYNIAKQQQQSFTKYIN 315
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
S L+ +++ PTT P L +Y+N +IA ++G Q+ +PL +
Sbjct: 316 SRLQKHDVILLPTTPGRAPLLSTAANQLGEYRNNLIKFTAIAGLAGLPQIHLPLFTINNA 375
Query: 415 PTSVSFIARHGGDRFLLDTVQNMYASL 441
P +S IA D L++ + + L
Sbjct: 376 PCGISLIAPKNQDLRLINIAKKLMKHL 402
>gi|402850118|ref|ZP_10898330.1| hypothetical protein A33M_3273 [Rhodovulum sp. PH10]
gi|402499607|gb|EJW11307.1| hypothetical protein A33M_3273 [Rhodovulum sp. PH10]
Length = 399
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 187/380 (49%), Gaps = 24/380 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+ AV D++D+ G TG G P W H A R + +V L+ GAT +GKTV DEF
Sbjct: 25 PLAGLTAAVKDMYDVAGTRTGGGSPAWLAAHPPAERNAGLVEKLLGAGATIVGKTVCDEF 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
YS+ GTN HY TP NP AP ++PGGSSSG+A A A+ + D +LG DT G VR+P+AFCG
Sbjct: 85 FYSVAGTNAHYGTPVNPRAPGRIPGGSSSGSASAAASGVCDVALGSDTGGSVRIPAAFCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP-RQIII 235
+ G RP+ G + G + ++ S D GW A P + VG VLL +A R+P ++I+
Sbjct: 145 LYGLRPTLGRMDLSGAMAMAPSFDVPGWMAAGPGVFAKVGDVLLS--GSAARTPVDKVIV 202
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQV--LKHENLG-EYFDSKVPSLKGFHKTNGE 292
DD F AD V ++ T G + + H + E FD
Sbjct: 203 LDDAFAQ----ADPEVAAFLEETLAAMGDALPKMSHGAIAPEGFDV-------------- 244
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
+ R++Q +E ++ES PA P + +I+ + + ++
Sbjct: 245 WREAFRVVQAFEVWKTFGAFVESKNPAFGPGVRERFETAAKITAEEADAARVVKRNATEW 304
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
I + +L PT P+ E ++ R L A +SG QVT+P G
Sbjct: 305 IHGVAAPGTVLALPTAPCIAPRADEPADYMESFRVRVMRLTCTAGISGLPQVTIPAGTIS 364
Query: 413 KCPTSVSFIARHGGDRFLLD 432
CP +SFI G D LL+
Sbjct: 365 GCPIGLSFIGWPGADEILLE 384
>gi|404329658|ref|ZP_10970106.1| Amidase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 412
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 210/424 (49%), Gaps = 30/424 (7%)
Query: 19 ILLMTKKLKKNIKQD-FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTG 77
IL+M + QD FGAFI+ QL + PK+ L L FA D+F + G+
Sbjct: 10 ILIMGDD---TMTQDPFGAFIQD-QLF-----IKPKSSGMLDHLIFAAKDVFAVSGHRNS 60
Query: 78 FGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPS 137
G+P+W +TH A R + V+ L+ GAT G TV DE YS+ G N HY NP P
Sbjct: 61 AGNPDWEKTHRPAVRNAQVIDRLLRSGATLRGMTVTDELMYSLRGDNIHYPPTINPRLPD 120
Query: 138 QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPIST 197
GGSSSG+AVAVA L DF++G DT G VR+PS++CG+ G RPS+G+VS G+IP++
Sbjct: 121 AFSGGSSSGSAVAVAGGLADFAIGTDTGGSVRIPSSYCGLFGMRPSHGSVSLDGVIPLAP 180
Query: 198 SLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKS 257
S DTVGW A +L+ +G LL P Q I F LL+ D V + +
Sbjct: 181 SFDTVGWMAGSSGLLQEIGQCLL---------PEQEIGTFRHFYLLREAWDLVASSTVGT 231
Query: 258 TEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVK 317
+ +E + YF S + + + L R++Q E +H WIE
Sbjct: 232 ---------VLNEAVFRYFPSGLEVCTLPYSSPELLSETFRILQGREAWQSHGAWIEKNH 282
Query: 318 PALDPDISAEIGEMLEI-SETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG 376
P DI+ ++ + V + ++ A+S LL DG++V PTT P P
Sbjct: 283 PRFGSDIAGRFEAASQMKQDDVWRHAAEVKRHFAEAMSRLLGQDGLIVLPTTFGPAPART 342
Query: 377 GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQN 436
+ + L IA V+G Q+T+P + P +SFI+ G DR LL V +
Sbjct: 343 DSAAAGGRVRAQTMKLTCIAGVAGLPQITIPFADQGR-PVGLSFISGAGTDRQLLAFVHD 401
Query: 437 MYAS 440
+ A+
Sbjct: 402 LPAN 405
>gi|332528635|ref|ZP_08404617.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041951|gb|EGI78295.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 412
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 198/386 (51%), Gaps = 13/386 (3%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P P L G+ AV DL D+ G +TG G+P+WA +H A+ + V+ L GA +GKT
Sbjct: 27 PTGPGRLAGVRLAVKDLIDVGGTITGGGNPDWASSHGEAAADAPCVAALRAAGARVVGKT 86
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
V DE A+S+ G N + TP +P P ++PGGSSSG+AVAVA D +LG DT G VRVP
Sbjct: 87 VTDELAFSLEGENAFFGTPVHPLDPGRLPGGSSSGSAVAVAWGEADLALGTDTGGSVRVP 146
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ--RS 229
++FCG+ RP++G ++ G++P + SLDTVGWFARD +LR G VLL A R+
Sbjct: 147 ASFCGLHALRPTHGRIALSGVLPFAPSLDTVGWFARDAALLRDAGQVLLGGSSAPTPVRA 206
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL--GE-YFDSKVPSLKGF 286
P ++ IA D L + + V + ++ R L+ E L GE D+ V +G
Sbjct: 207 PLRLCIAQDT---LALASPEVREALLDWAR----RAGLREERLAFGEGEGDAAVAQEQGT 259
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
L L Q E + + WI + +P P I+ L + E++ ++ R
Sbjct: 260 APWRDWLTAYATL-QGLEIRTHLGPWIRARRPRFGPAIAPRFAGALALDESIGARWRAWR 318
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
+ A+ L D + P G + + A +L ++A ++G Q+ +
Sbjct: 319 TDAARALRERLGQDEAWLVPAAPTVALHRGADAATRNAFYDHALALGALAGLAGLPQLVL 378
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLD 432
PL + P +SFI+ G D LLD
Sbjct: 379 PLRHTQGLPIGLSFISAPGHDERLLD 404
>gi|389693422|ref|ZP_10181516.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
gi|388586808|gb|EIM27101.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
Length = 397
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 198/397 (49%), Gaps = 19/397 (4%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P+P PL+GL+FA DLFD+ GY T G P SRT+ V L++ GA
Sbjct: 15 PAVPVPHAPSGPLSGLTFAAKDLFDVAGYPTSAGSPHMLAMSGIKSRTAPTVQKLLDAGA 74
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT+ DE A+S++G N H+ TP N AP ++PGGSSSG+A AV+ DF+LG DT
Sbjct: 75 RLVGKTITDELAFSMSGKNAHFGTPVNGGAPDRIPGGSSSGSAAAVSNGSCDFALGTDTG 134
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P++ CG+ G RP++G VS G ++ S DT G+F RD VG VLL P +
Sbjct: 135 GSVRAPASHCGLFGIRPTHGRVSLEGCHDLAPSFDTCGYFTRDGATFVRVGEVLLG-PDS 193
Query: 226 A--QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSL 283
A +SPR +++A D F LLK + ++ E G+ V +
Sbjct: 194 APLPQSPR-VLLAQDAFGLLKREVRDALAPALRRAEAALGQPVPADV-----------AP 241
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCK 343
+GF L MR IQ E N IE P L P ++ +++ + +
Sbjct: 242 EGFTA----LYWAMRYIQSREAWNVDGPMIERYHPPLGPGVADRFEFSKAVTDAQVAEAQ 297
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQ 403
IR R S+LL D +L+ P+ P L + DY+N A +LL ++ +SG Q
Sbjct: 298 VIRAAFRKRFSALLADGAVLILPSMPDIAPLLAESDASLNDYRNNALNLLCLSVLSGLPQ 357
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
V++PL P +S + G D L+ + S
Sbjct: 358 VSIPLASRSGAPLGLSIMGPAGSDLSLVALADRIAGS 394
>gi|307107250|gb|EFN55493.1| hypothetical protein CHLNCDRAFT_9137, partial [Chlorella
variabilis]
Length = 373
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 180/379 (47%), Gaps = 28/379 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTST------VVSTLVEGGATCIGK 110
PL GL+FA D +++ GY TG G+P WAR H A T+ + L++ GA GK
Sbjct: 2 PLAGLAFAAKDSYNVAGYATGLGNPSWARDHPPAKTTAPARKSPRCLQALLDAGANLAGK 61
Query: 111 TVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ E AY +G N HY TP N AAP MPGGSSSG A VA+ V F+LG DT G VRV
Sbjct: 62 AAMSELAYDFSGQNYHYGTPPNTAAPCHMPGGSSSGCAALVASGEVAFALGGDTAGSVRV 121
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P++FCG+ RPS+G VS G +P++ S DT GWFARD ++L VG LL A +P
Sbjct: 122 PASFCGVFSCRPSHGRVSLEGSVPLAPSFDTAGWFARDAELLSAVGKTLL-----AGSAP 176
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
+ D + L+ V ++ + H + P
Sbjct: 177 GPAV---DSWNLVTATTPARVACLLAGACGESELCLFPHLLAAATYQCCWP--------- 224
Query: 291 GELKNVMRLIQRYEFKNNHNEWIES-VKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
+ +Q E W+ KPA+ I+ + +S+ + + +
Sbjct: 225 ---LPLPLALQSKEVNEVLGPWVSGPTKPAVSAGIAQRLKAASLVSKQAAAAARQQADAI 281
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
+ + SLL +L+ PTT +P P LG D R +L SIAS++G QV++PL
Sbjct: 282 TTRLDSLLGTSSVLLLPTTPFPAPPLGSDLEAQPDNVGRLMALTSIASLAGLPQVSMPLA 341
Query: 410 YY-DKCPTSVSFIARHGGD 427
D P VS I G D
Sbjct: 342 TLEDGLPVGVSIIGPRGSD 360
>gi|83310767|ref|YP_421031.1| amidase [Magnetospirillum magneticum AMB-1]
gi|82945608|dbj|BAE50472.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Magnetospirillum magneticum AMB-1]
Length = 391
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 189/381 (49%), Gaps = 15/381 (3%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+FA D+FD+ GYVTG G+P+W R A T+ + TL+E GA +GKT DE
Sbjct: 23 PLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPAKHTAWAIGTLLESGARLVGKTHTDEL 82
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
I G N HY TP NP AP +PGGSSSG+A AVA L +LG DT G RVP++FCG
Sbjct: 83 TRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLCSMALGTDTAGSTRVPASFCG 142
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP+ G + G++ S + DTVG A DP+IL +G LL+ R P Q+++
Sbjct: 143 VFGLRPTLGTIPMDGVLSQSNTFDTVGLLADDPEILAKMGEALLRKKIKDTR-PAQVVVL 201
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
+D E ++ + ++ +++ L S VP N
Sbjct: 202 EDALEASDPAVAAAIEAALPRIKEAVA-PIVRGRKL-----SPVPLADWVEHQNA----- 250
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
IQ E EWI + P +++ ++S+ + + R + +
Sbjct: 251 ---IQGREAWETFGEWINNSNPRFGFEVADNFLRGSKVSQRTLSAARGFRLRAKRWVQEA 307
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L+ + +LV PTT P + + + ++R SL +IA ++GC Q+++PL D P
Sbjct: 308 LEGNAMLVLPTTPVTAPPVHSPRSVMWEIRHRIVSLTTIAGMAGCPQISLPLCKVDGLPV 367
Query: 417 SVSFIARHGGDRFLLDTVQNM 437
+S I G D LL Q +
Sbjct: 368 GLSLIGPRGSDALLLAAAQRI 388
>gi|186473369|ref|YP_001860711.1| amidase [Burkholderia phymatum STM815]
gi|184195701|gb|ACC73665.1| Amidase [Burkholderia phymatum STM815]
Length = 400
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 195/414 (47%), Gaps = 31/414 (7%)
Query: 35 GAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTS 94
GAF+ P PP+ L GL AV D+FDI G TG G+ W RT+
Sbjct: 12 GAFVADGFDALPAAARPPRVGDKLAGLRLAVKDVFDIAGLRTGSGNLAWRDEQPVGLRTA 71
Query: 95 TVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAAD 154
V L+E A IGKTV DE YS+ G N HY TP NPA P+++PGGSSSG+AVAVAA
Sbjct: 72 LAVRALLEEDARWIGKTVTDELTYSLAGVNAHYGTPVNPADPARIPGGSSSGSAVAVAAG 131
Query: 155 LVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRH 214
D +LG D G VR+P+++CG+ G RP++G V+ G + ++ S DTVGWFARD + L
Sbjct: 132 HADIALGTDCGGSVRLPASYCGVWGMRPTHGRVASDGCLTLAHSFDTVGWFARDARRLAD 191
Query: 215 VGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE 274
V VL R I++ D L +P +S VL
Sbjct: 192 VFEVL----------ARSIVMERDEPINLHVP---------RSLLACVDAPVLA------ 226
Query: 275 YFDSKVPSLKG---FHKTNGELKN---VMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
F++ +P+L F + L + R++Q E + W + D+ A
Sbjct: 227 CFEASLPALGDAVTFVEPKASLVDWAQAFRVLQAAEIAQRYGVWAYEHAASFGRDVGARF 286
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNR 388
I+ I + + +R E ++ L D + PT P+ + + R
Sbjct: 287 AMSRTITCEQIADAQRVRVEAIRTMADALAQDTYWIVPTVPGVAPRADASAETVDHTRAR 346
Query: 389 AFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
+ +L +A ++G QV++P + P +S I G D +L + ++A+++
Sbjct: 347 SQQMLCVAGLAGLPQVSMPWTRIEGAPVGLSLIGARGTDEGVLRAARAVHAAMR 400
>gi|332528853|ref|ZP_08404827.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041712|gb|EGI78064.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 395
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 188/375 (50%), Gaps = 15/375 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GLSF V DLFD+ GY TG G+P +RT+ V L++ GA GKTV DE
Sbjct: 25 PLAGLSFGVKDLFDVAGYPTGGGNPIVLALSGLKTRTAPTVQKLLDAGARFAGKTVTDEL 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+NG N H+ P N AAP ++ GGSSSG+A AV++ L DF+LG DT G VR P+ CG
Sbjct: 85 AFSMNGNNAHFGAPINGAAPDRITGGSSSGSASAVSSRLCDFALGTDTGGSVRAPANHCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP++G VS G + ++ S DT GWFARD V VLL + +++
Sbjct: 145 LYGIRPTHGRVSLEGALDLAPSQDTCGWFARDVMTFARVADVLLDTDPQPLPARVRLLRP 204
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D + LL + ++ E L G H L + FD+ S
Sbjct: 205 TDVWALLVPEVTAALSPAVQRVETLLGTCSPVHAVL-DSFDAMYWSF------------- 250
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
R IQ E IE P L P ++ E+++ ++ + R R ++ L
Sbjct: 251 -RHIQGREAWTTDGPLIERYAPPLGPGVAERFAWAREVTDAQVQAATTFRTRFRQHLTQL 309
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L +D +L+ PT P E EDY+NRA +L IA ++G Q+++PL + P
Sbjct: 310 LGNDAVLLMPTMPDIAPLRSTSESALEDYRNRAIQMLCIAGLAGFPQLSMPLAQREGAPL 369
Query: 417 SVSFIARHGGDRFLL 431
+S + G DR L+
Sbjct: 370 GLSLLGPAGSDRALI 384
>gi|109898372|ref|YP_661627.1| amidase [Pseudoalteromonas atlantica T6c]
gi|109700653|gb|ABG40573.1| Amidase [Pseudoalteromonas atlantica T6c]
Length = 405
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 182/380 (47%), Gaps = 25/380 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+S AV DLF I+G T G+P+W +H A +TS V+ L+ GA+ +GKT+ DE A
Sbjct: 37 LNGVSLAVKDLFHIKGLPTTAGNPDWLASHPAPQQTSPAVNALLHAGASLVGKTITDELA 96
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP N +AP ++PGGSSSG+AVAV LG DT G +RVP+++ G+
Sbjct: 97 YSLNGQNIHYGTPFNISAPDRLPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 156
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++G VS ++ ++ S DTVGW RD L V VLL D
Sbjct: 157 FGLRPTHGRVSCEHMVSLAPSFDTVGWITRDLSTLDKVAQVLLN--------------KD 202
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP-----SLKGFHKTNGE 292
D + P V I E+L Q + LG ++ V S +
Sbjct: 203 D--DQTPCP---VKDAKIGFAEEL-AAQCEYSDTLGTAYNRMVKRQCTLSSGLSSDLLTQ 256
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
R++Q YE H +WI +KP PDI I+E +N K + E S
Sbjct: 257 ASGTFRILQGYEIWQTHGQWITELKPTFAPDIQERFEWCATITEDQQQNAKKKQKEFISH 316
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
I L ++ PTT P + Y+N +L IA + G Q+ +PL
Sbjct: 317 IQHLFSQCDVIFLPTTPGAAPLINTPSEQLATYRNTLMNLTCIAGLCGLPQLHIPLAINP 376
Query: 413 KCPTSVSFIARHGGDRFLLD 432
+ P S I + D+ L++
Sbjct: 377 QAPIGFSLIGQKNHDKQLIE 396
>gi|420253617|ref|ZP_14756664.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398051850|gb|EJL44161.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 383
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 196/390 (50%), Gaps = 33/390 (8%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL FAV DL D+ G TG G+P+W THS A+R + V+ L++ GA+ GKT+ DE A
Sbjct: 20 LDGLRFAVKDLIDVAGTTTGGGNPDWLATHSPAARHAPCVAKLLDAGASVDGKTITDELA 79
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ G N HY TP NP P +PGGSSSG+A AVA+ VDF+LG DT G VRVP+AFCG+
Sbjct: 80 YSLEGVNAHYGTPLNPRWPFALPGGSSSGSASAVASGEVDFALGTDTGGSVRVPAAFCGL 139
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++ AVS G++P + DTVGWF ++L V VLL
Sbjct: 140 WGIRPTHNAVSLEGVLPFAPCFDTVGWFTATGEMLARVADVLLD---------------- 183
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLK---HENLGEYFDSKVPSLKGFHKTNGELK 294
+PA +++ E R + + LGE F + ++
Sbjct: 184 ------GVPAVDAPSALVRCKEAFDARATNEPGDAQRLGELFATH-DEIEVIADDRARWL 236
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
+V + +Q + WI++ KP DI+A + +E C+ +R+ I
Sbjct: 237 HVYQQLQDDAIGASLGAWIDATKPHFGADIAARFARLKTHDAAEVERCRVMRDAFAQRID 296
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSED---YQNRAFSLLSIASVSGCCQVTVPLGYY 411
++ D ++V PT P L K E + A ++ +IA+ G QVTVP+
Sbjct: 297 GIVG-DALIVLPTA---PRSLLSKHETPERTDAFYRDALTMNAIAAFGGLPQVTVPVANE 352
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
+ P ++S I G DR L+ + ++ +L
Sbjct: 353 SERPLALSIIGPRGSDRALIARARQLFPTL 382
>gi|385204948|ref|ZP_10031818.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
gi|385184839|gb|EIF34113.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
Length = 399
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 202/394 (51%), Gaps = 26/394 (6%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL GL FAV DL D+ TG G+P W +H+AA + V TL+ GA GKT+
Sbjct: 16 ASGPLNGLRFAVKDLIDVASVTTGGGNPGWLASHAAARAHARCVDTLLAAGAALDGKTIT 75
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DE AYS+ G N HY TP NP P +PGGSSSG+A AVA VDF+LG DT G VRVP+A
Sbjct: 76 DELAYSLEGENHHYGTPLNPRWPHALPGGSSSGSASAVANGEVDFALGTDTGGSVRVPAA 135
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL------PFAAQ 227
FCG+ G RPS+ A+ G++P + DTVGWFAR +L VG VLL + +A+
Sbjct: 136 FCGLFGMRPSHDAIPLDGVLPFAPCFDTVGWFARSIDVLAAVGDVLLPVAPSASTAYASG 195
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH 287
R+ R +A+ + AD ++ + E+L R SL F
Sbjct: 196 RAVRLTRVAEAFAARERNEADDAARLTALA-ERLGART----------------SLDVFA 238
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
+ +Q E + WI S +P P I+ + + +++ +
Sbjct: 239 GNQARWLACYQAVQDLEIDASLGAWIRSAQPRFGPGIAPRFARLDTLDRQQAAQWRTVLH 298
Query: 348 EMRSAISSLLK-DDGILVTPTTAYP-PPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
E+RSA+++L + D +LV PTT PK + + Y++ + ++ SIA+ G Q+T
Sbjct: 299 ELRSALNTLFEIDRTVLVMPTTPVALLPKNASGDTIGRFYED-SLTMNSIAAFGGLPQIT 357
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
+P P ++S I G DR LL +++Y+
Sbjct: 358 LPFADELDRPLALSLIGARGSDRALLSLARDLYS 391
>gi|409408484|ref|ZP_11256919.1| Amidase [Herbaspirillum sp. GW103]
gi|386431806|gb|EIJ44634.1| Amidase [Herbaspirillum sp. GW103]
Length = 396
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 200/392 (51%), Gaps = 26/392 (6%)
Query: 47 PQPLPPKAPH----PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVE 102
P P P+ PH PL G+ AV D+FD+ GY TG G+P + ++ V L++
Sbjct: 13 PYPFVPQ-PHASSGPLAGVRLAVKDIFDVAGYPTGCGNPHMLALSGIKTDSAPAVQALLQ 71
Query: 103 GGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGI 162
GA +GK DE A+S+NG N H+ TP N AP ++PGGSSSG+A AV+ L D +LG
Sbjct: 72 AGAQFVGKVYTDELAFSMNGKNAHFGTPRNGGAPDRIPGGSSSGSASAVSNGLADLALGT 131
Query: 163 DTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-- 220
DT G VRVP++ CG++G RP++G V ++ ++ S DT GWFARD + G VLL
Sbjct: 132 DTGGSVRVPASHCGLIGLRPTHGRVWLERVMELAGSFDTCGWFARDMDVFSRAGAVLLGE 191
Query: 221 -QLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSK 279
P AQ PR ++ AD V+ ++ + FG+ + + L +
Sbjct: 192 DSAPLPAQ--PRVLVAAD------------VLALLAPRVQAQFGQLL---DRLDGVLGTP 234
Query: 280 VPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVI 339
P +K + L R IQ YE H E I L P ++ I+ +
Sbjct: 235 QP-VKAAGPSFDALYWAFRHIQGYEAWRAHGENISRHGFQLGPGVAERFAWSSTITPQQM 293
Query: 340 ENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVS 399
E ++R R + + LL DG+L+ P+ P L E EDY+N+A +L ++ +S
Sbjct: 294 EEHSAVRRTFRESFTRLLGQDGVLLLPSAPDVAPLLTDSEQSLEDYRNQAVRMLCLSGLS 353
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
G Q+++PL D P +S IA G DR L+
Sbjct: 354 GFPQISLPLMQLDGAPFGLSLIAPPGSDRSLI 385
>gi|398808822|ref|ZP_10567680.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
gi|398086831|gb|EJL77438.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
Length = 392
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 194/392 (49%), Gaps = 15/392 (3%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P+P A PL LSFA DLFD+ GY TG G+P +RT+ V L++ GA
Sbjct: 14 PDAPVPRAATGPLVDLSFAAKDLFDVAGYPTGGGNPIVLAMSGIKTRTAPTVQKLLDAGA 73
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
GKTV DE A+S+NG N H+ P N AP ++ GGSSSG+A AV+++L DF+LG DT
Sbjct: 74 RFAGKTVTDELAFSMNGNNAHFGAPVNGGAPLRIAGGSSSGSASAVSSNLCDFALGTDTG 133
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P+ CG+ G RP++G VS G + ++ S DT GWFARD V VLL A
Sbjct: 134 GSVRAPANHCGLYGLRPTHGRVSLEGALDLAPSFDTCGWFARDVGTFARVADVLLGADAA 193
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
+++ DD + L A +Q + L G L E FD+
Sbjct: 194 TLPERVRLLRPDDVWALAVPAAADALQGAAGRVQDLLGPAQGTTVAL-ESFDAMY----- 247
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+H R +Q E IE P L P ++ E+++ + +
Sbjct: 248 WH---------FRYLQSREAWLTDGPLIERYAPPLGPGVAERFAWSREVTDAQVTTARIF 298
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
R R+ ++ LL DG+L+ PT P E EDY+NRA +L IA ++G Q++
Sbjct: 299 RTAFRAHLTHLLGTDGVLLLPTMPDIAPLRSDSEASMEDYRNRAIRMLCIAGLAGFPQLS 358
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+PL + P +S + G DR L+ Q +
Sbjct: 359 IPLATREGAPLGISLLGPAGSDRSLVALAQRI 390
>gi|312198777|ref|YP_004018838.1| amidase [Frankia sp. EuI1c]
gi|311230113|gb|ADP82968.1| Amidase [Frankia sp. EuI1c]
Length = 574
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 192/378 (50%), Gaps = 28/378 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+ AV DLF ++G+ TG G+P W + R + V+ L+ GA G DE
Sbjct: 195 PLRGLTVAVKDLFAVQGHRTGAGNPTWLAEAAPEPRHAPAVAALLAAGADVAGIAQTDEL 254
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS++GTN HY TP NP AP +PGGS+SG A AVA LVD LG DT G VRVP+++CG
Sbjct: 255 AYSLSGTNVHYGTPPNPTAPGVVPGGSTSGPASAVALGLVDVGLGTDTGGSVRVPASYCG 314
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP++GAVS G++P++ S DTVGW RD L VG VLL AA +P ++++A
Sbjct: 315 LFGIRPTHGAVSAAGVVPLAPSFDTVGWLTRDADTLAQVGAVLLPADPAAG-APTRLLVA 373
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN- 295
DD + + V+ + G +H VP + G G L +
Sbjct: 374 DDLVAAAEPEVGAALAAVLPALAAAVGLPT-RH----------VPRVAG-----GRLDDW 417
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
R Q +E H W+ + L P ++A ++E + + +R ++R +
Sbjct: 418 VTAFRQNQGWEANATHGAWVAAHPGTLGPGVAARFAAAAAVTEGQLRTAQRVRTQVRDIL 477
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNR----AFSLLSIASVSGCCQVTVPLG 409
+ L +LV P ++ P P++ L+ D ++R +L S A ++G V +P+
Sbjct: 478 GAALAGGTVLVAPASSSPAPRMD----LAVDVKDRVRAATLTLTSGAGLAGLPVVVLPML 533
Query: 410 YYDKCPTSVSFIARHGGD 427
P V+ I G D
Sbjct: 534 RVRDRPVGVALIGAAGTD 551
>gi|410628301|ref|ZP_11339024.1| amidase [Glaciecola mesophila KMM 241]
gi|410152165|dbj|GAC25793.1| amidase [Glaciecola mesophila KMM 241]
Length = 401
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 177/375 (47%), Gaps = 15/375 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+S AV DLF I+G T G+P+W +H +TS V L+ GA+ +GKT+ DE A
Sbjct: 33 LNGVSLAVKDLFHIKGIPTTAGNPDWLASHPTPEQTSPAVDALLHAGASLVGKTITDELA 92
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP N +AP ++PGGSSSG+AVAV LG DT G +RVP+++ G+
Sbjct: 93 YSLNGQNIHYGTPFNISAPERLPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 152
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++G +S ++ ++ S DTVGW RD L V VLL +++P + A
Sbjct: 153 FGLRPTHGRISCEHMVSLAPSFDTVGWITRDLSTLDKVAQVLLNK--DDEQTPYPVKDAK 210
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
F + + K+ RQ + L +
Sbjct: 211 IGFAEELAAQCEYSDALSSAYNKMVKRQCILSSGLSSDLLIQA-------------SGTF 257
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
R++Q YE H +WI KP PDI I+E +N K + E S I L
Sbjct: 258 RILQGYEIWQTHGQWITKQKPTFAPDIQERFEWCATITEKQQQNAKKKQKEFISHIHYLF 317
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
++ PTT P + Y+N+ +L IA + G Q+ +PL P
Sbjct: 318 SQCDVIFLPTTPGAAPLINTPSEQLATYRNKLMNLTCIAGLCGLPQLHIPLAINPHAPMG 377
Query: 418 VSFIARHGGDRFLLD 432
S I + D+ L++
Sbjct: 378 FSLIGQKNHDKQLIE 392
>gi|390571058|ref|ZP_10251314.1| amidase [Burkholderia terrae BS001]
gi|389937214|gb|EIM99086.1| amidase [Burkholderia terrae BS001]
Length = 383
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 197/389 (50%), Gaps = 31/389 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL FAV DL D+ G TG G+P+W THS A+R + V+ L++ GA+ GKT+ DE A
Sbjct: 20 LDGLRFAVKDLIDVAGTTTGGGNPDWLATHSPAARHAPCVARLLDAGASVDGKTITDELA 79
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ G N HY TP NP P +PGGSSSG+A AVA+ VDF+LG DT G VRVP+AFCG+
Sbjct: 80 YSLEGVNAHYGTPLNPRWPFALPGGSSSGSASAVASGEVDFALGTDTGGSVRVPAAFCGL 139
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++ AVS G++P + DTVGWFA +L V VLL A +P ++
Sbjct: 140 WGIRPTHDAVSLEGVLPFAPCFDTVGWFAPTGAMLARVADVLLD-DVPAVDAPSALVRCK 198
Query: 238 DCFELLKI--PADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
+ F+ P D + +LF Q HE ++ +
Sbjct: 199 EAFDARATNEPGD------AQRLRELFATQ---HE------------IEVIADDRARWLH 237
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
V + +Q + WI++ KP DI+A + +E C +R I
Sbjct: 238 VYQQLQDDAIGASLGAWIDATKPHFGADIAARFARLKMHDAAEVERCHVMRAAFAQRIDG 297
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSED---YQNRAFSLLSIASVSGCCQVTVPLGYYD 412
++ D ++V PTT P L K E + A ++ +IA+ G QVTVP+
Sbjct: 298 IVGDT-LIVLPTT---PRSLLSKHETPERTDAFYRDALTMNAIAAFGGLPQVTVPVANES 353
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASL 441
+ P ++S I G DR L+ + ++ +L
Sbjct: 354 ERPLALSIIGPRGSDRALIARARQLFPTL 382
>gi|94310875|ref|YP_584085.1| amidase [Cupriavidus metallidurans CH34]
gi|93354727|gb|ABF08816.1| Amidase [Cupriavidus metallidurans CH34]
Length = 396
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 192/396 (48%), Gaps = 15/396 (3%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P+P A PL GL+FAV DLFD+ GY TG G+P + T+ V L++ GA
Sbjct: 15 PDAPVPNAANGPLRGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLLDAGA 74
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GK DE A+S+NG N HY P N AAP ++ GGSSSG+A AV+ L DF+LG DT
Sbjct: 75 AFVGKVHTDELAFSMNGQNHHYGGPYNGAAPDRITGGSSSGSASAVSNKLCDFALGTDTG 134
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P++ CG+ G RPS+G +S +P+ +LDT G+FARD V VLL
Sbjct: 135 GSVRAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLLGADAN 194
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
S ++++A D FEL A + + E + G K +
Sbjct: 195 PLPSRPRLLLAADLFELPTPEARKALAPATARIEAVLG---------------KASPVDV 239
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+ +L R +Q +E IE+ L PD++ E++ E ++
Sbjct: 240 ADRPLSDLYWAFRYVQGWEAWRADGALIENYGLQLGPDVAGRFAFSKEVTAAQFEKSSAV 299
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
R E + + LL DGIL+ PT P EDY+ A L + ++G Q++
Sbjct: 300 RREFTAHLGCLLGQDGILLLPTMPDIAPLRTTPMEALEDYRTTAAHTLCLTPLTGFPQLS 359
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
+PL D P VS I G DR L+ + + ++
Sbjct: 360 LPLSGRDGAPLGVSLIGPMGSDRSLIAVAETLMTAI 395
>gi|91786295|ref|YP_547247.1| amidase [Polaromonas sp. JS666]
gi|91695520|gb|ABE42349.1| Amidase [Polaromonas sp. JS666]
Length = 394
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 199/391 (50%), Gaps = 24/391 (6%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P+P PL L F V DLFD+ GY TG G P +RT+ V L++ GA
Sbjct: 14 PDVPVPSAFTGPLADLRFGVKDLFDVAGYPTGGGSPTVLALSGIKTRTAPTVQKLLDAGA 73
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
GKTV DE A+S+NG N H+ P N AA ++ GGSSSG+A AV++ L DF+LG DT
Sbjct: 74 LFAGKTVTDELAFSMNGNNAHFGAPLNGAAHDRITGGSSSGSASAVSSGLCDFALGTDTG 133
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P+ CG+ G RP++G VS ++ ++ SLDT GWFARD VG VLL
Sbjct: 134 GSVRAPANHCGLYGLRPTHGRVSLESVLDLAPSLDTCGWFARDVGTFVRVGDVLLGEDVT 193
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQV-VIKSTEKLFGR----QVLKHENLGEYFDSKV 280
+ +++ +D + ++ PA RV++ +S + L G QV++ Y++
Sbjct: 194 PLPADVRLLWPEDVWAMMDAPARRVLESGAAQSVQSLLGPTTPVQVVRESWDAMYWN--- 250
Query: 281 PSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIE 340
R +Q E IE P+L P ++ +++ +
Sbjct: 251 ----------------FRYVQSREAWLTDGPLIERYAPSLGPGVAERFAWSCNVTDEQVN 294
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG 400
++ R R+ ++ LL DDG+L+ PT P E EDY+NRA +L IA ++G
Sbjct: 295 AARAFRAAFRAQLAGLLGDDGVLLMPTMPDIAPLRSASEASLEDYRNRAIRMLCIAGLAG 354
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
Q+++P+ ++ P +S + G DR LL
Sbjct: 355 FPQLSMPMARHEGAPLGLSLLGPAGRDRSLL 385
>gi|84517181|ref|ZP_01004536.1| amidase [Loktanella vestfoldensis SKA53]
gi|84508856|gb|EAQ05318.1| amidase [Loktanella vestfoldensis SKA53]
Length = 392
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 190/380 (50%), Gaps = 30/380 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+ AV D+FD+ GY TG G P A +T++ L++ GA +GKT DE
Sbjct: 26 PLAGLTLAVKDIFDVAGYRTGSGCPTRLAQSPVARKTASAAQRLLDAGAQFVGKTHTDEL 85
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+ G N H+ TP NPAAP ++PGGSSSG+AVAVA L D ++G DT G VR P++FCG
Sbjct: 86 AWSMYGMNAHFGTPVNPAAPDRIPGGSSSGSAVAVAGGLADIAIGSDTGGSVRAPASFCG 145
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G RP++G V G+ P++ S D VG FARD L LL P A P +++
Sbjct: 146 IWGLRPTHGRVCLDGVQPLAPSYDAVGLFARDGATLARAADALLG-PDTAALPPNPVLLR 204
Query: 237 DDCFELLKIPADRVVQVVIKSTE---KLFGRQVLKHENLGEYFDSKVPSLKGFHKT--NG 291
P D + Q+ + +FG L+ +++ E F V ++ T +G
Sbjct: 205 ---------PTDMIAQLAAEQQAIYVSVFG--ALQAQDV-EVFPQGVAAVYDIFLTTISG 252
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ K + WI++ L I + +++E I + + R +
Sbjct: 253 DAKAAIV------------PWIKASGMPLVRGIHGRVAAAEQLAEAQIADARKARANYAA 300
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
I +LL D G+L+ P P +L + + Y++ A LL +A + G QVT P G
Sbjct: 301 KIVALLGDTGVLLAPVVPEAPFRLDAPIEVFDTYRHDAMRLLCVAGLVGLPQVTFPAGSI 360
Query: 412 DKCPTSVSFIARHGGDRFLL 431
D P +S I G D L+
Sbjct: 361 DGAPFGLSLIGPRGSDLSLI 380
>gi|326402417|ref|YP_004282498.1| putative amidase [Acidiphilium multivorum AIU301]
gi|325049278|dbj|BAJ79616.1| putative amidase [Acidiphilium multivorum AIU301]
Length = 389
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 182/374 (48%), Gaps = 27/374 (7%)
Query: 55 PH-PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PH PL GL V DLFDI G VT FG+P+W R A + +VS L+E GA GKT
Sbjct: 25 PHGPLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTT 84
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
E A+ + G N HY TP NPAAP ++PGGSSSG+ VA+ +G DT G VR+P++
Sbjct: 85 VELAFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPAS 144
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
+CG+ G RP+ G +S G P++ S DT GWF RD + + VG L
Sbjct: 145 YCGLYGLRPTQGLLSLAGAAPLAPSFDTPGWFTRDAETMLRVGEAL------------LP 192
Query: 234 IIADDCFELLKIPA--DRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ L IPA V+ + E R LG ++ P +G +
Sbjct: 193 PAPPLAAQFLMIPAAFANADPDVVAALEPALAR-------LGPMGEAD-PVPEGLDRML- 243
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+N +R + + +IE+VKP LDP + I + + R +
Sbjct: 244 AWQNAVRGRETWLTLGG---FIETVKPLLDPVTAGRIAATRGFTAEAAAEGRVARRAHTA 300
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ +LL +LV PT+ P P + ++ + ED + R + IA+ +G ++T+P+G
Sbjct: 301 RMHALLAGGAVLVIPTSPCPAPPVAAEQAVYEDVRTRTLRVGIIAAFAGLPELTIPVGKV 360
Query: 412 DKCPTSVSFIARHG 425
+ P +S IA G
Sbjct: 361 NGAPVGLSLIAGPG 374
>gi|148259263|ref|YP_001233390.1| amidase [Acidiphilium cryptum JF-5]
gi|146400944|gb|ABQ29471.1| Amidase [Acidiphilium cryptum JF-5]
Length = 389
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 182/374 (48%), Gaps = 27/374 (7%)
Query: 55 PH-PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PH PL GL V DLFDI G VT FG+P+W R A + +VS L+E GA GKT
Sbjct: 25 PHGPLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTT 84
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
E A+ + G N HY TP NPAAP ++PGGSSSG+ VA+ +G DT G VR+P++
Sbjct: 85 VELAFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPAS 144
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
+CG+ G RP+ G +S G P++ S DT GWF RD + + VG L
Sbjct: 145 YCGLYGLRPTQGLLSLAGAAPLAPSFDTPGWFTRDAETMLRVGEAL------------LP 192
Query: 234 IIADDCFELLKIPA--DRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ L IPA V+ + E R LG ++ P +G +
Sbjct: 193 PAPPLAAQFLMIPAAFANADPDVVTALEPALAR-------LGPMGEAD-PVPEGLDRML- 243
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+N +R + + +IE+VKP LDP + I + + R +
Sbjct: 244 AWQNAVRGRETWLTLGG---FIETVKPLLDPVTAGRIAATRGFTAEAAAEGRVARRAHTA 300
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ +LL +LV PT+ P P + ++ + ED + R + IA+ +G ++T+P+G
Sbjct: 301 RMHALLAGGAVLVIPTSPCPAPPVAAEQAVYEDVRTRTLRVGIIAAFAGLPELTIPVGKV 360
Query: 412 DKCPTSVSFIARHG 425
+ P +S IA G
Sbjct: 361 NGAPVGLSLIAGPG 374
>gi|336117854|ref|YP_004572622.1| amidase [Microlunatus phosphovorus NM-1]
gi|334685634|dbj|BAK35219.1| putative amidase [Microlunatus phosphovorus NM-1]
Length = 534
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 191/407 (46%), Gaps = 42/407 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+ AV DLF I GY G G+P W R T+ VS L+ GGA+ G DEF
Sbjct: 146 PLAGLTVAVKDLFAIRGYRIGAGNPTWLRERRREQATAPAVSDLLRGGASLRGIARTDEF 205
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYSI G N HY TP N A P +PGGSS+G A AVA D L DT G +RVP+++ G
Sbjct: 206 AYSIAGANVHYGTPPNGALPGALPGGSSNGPAAAVALGQADVGLASDTAGSIRVPASYQG 265
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ--------- 227
+ G R ++G V G++P+S + DTVGW ARD + L V +L +A
Sbjct: 266 LWGLRTTHGIVPRQGMLPLSQTFDTVGWLARDAETLDRVATWVLITDSSADDPEADLTPD 325
Query: 228 -RSPRQIIIADDCFELLKIPADRVVQVVIK---STEKLFGRQVLKHENLGEYFDSKVPSL 283
+ PR+I + + + Q + +T+++ G +++ +L Y +
Sbjct: 326 AQLPRRIAVPAEALACTEADTRDAFQAWLDRAAATDQVDGVDIVEVGDLSAYLE------ 379
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCK 343
V R +Q E N+ W+E+ AL PDI+A + EM S E +
Sbjct: 380 ------------VFRTVQSAEAWRNNGAWVEAHPGALGPDIAARL-EM--ASRVTTEQER 424
Query: 344 SIRNE---MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG 400
+ +NE MR I + L D+ ILV PT P P E + + S+A + G
Sbjct: 425 AAQNELSRMRQRIRA-LTDEAILVLPTAPGPAPARTADGPTIETVRAATLRMTSLAGIGG 483
Query: 401 CCQVTVPL----GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
++ PL P V F+ D LL V+ + A+ Q+
Sbjct: 484 LPALSAPLLTVPSLLGPAPVGVCFVGPAERDLDLLRWVRAIEAATQD 530
>gi|303280153|ref|XP_003059369.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459205|gb|EEH56501.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 432
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 197/391 (50%), Gaps = 41/391 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVDE 115
L+GL+FAV D D+ G+ TG G+P+W RT A+ + V+ +++ GATC+GKT +DE
Sbjct: 55 LSGLTFAVKDNLDLAGHRTGCGNPDWLRTRGGTPAATHAPCVAAMLDAGATCVGKTQMDE 114
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A+S+ G N HY TP+NPA PS++PGGSSSG+A AVAA VD +LG DT G VRVP+++
Sbjct: 115 LAWSLQGENAHYGTPSNPADPSRVPGGSSSGSACAVAAAHVDVALGTDTAGSVRVPASYV 174
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G+ GFRPS+G V G + ++ S D VGWFARD L G LL P I
Sbjct: 175 GVYGFRPSHGRVPVDGCVALARSFDCVGWFARDAATLMACGAALLP-----PDRPSGTIH 229
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK- 294
AD F+ L + D + E L + +++ K G+L+
Sbjct: 230 ADG-FKRLIVATDAFATCDAGTREAL------------------ISAIERAAKAGGDLEP 270
Query: 295 ---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI---GEMLEISETVIENCKSIRNE 348
+ R +Q E H WIE P+ P ++ + I + R+
Sbjct: 271 AWWDSFRTLQTREVWLEHGAWIEETDPSFGPGVAERFAAAEAGGGAATDAIAAANAARDA 330
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQ----- 403
+ ++++L+ G++V P+ P K G +E ++ R L + A ++G Q
Sbjct: 331 ITRRLNAMLEGGGVIVLPSAPSPALKTGASAEATEAFRARQLRLTTAAGMAGLPQARRFG 390
Query: 404 ---VTVPLGYYDKCPTSVSFIARHGGDRFLL 431
V++P D P +SFIA G D LL
Sbjct: 391 RRIVSIPAATADGAPVGLSFIAARGRDEELL 421
>gi|407687341|ref|YP_006802514.1| amidase [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407290721|gb|AFT95033.1| amidase [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 409
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 194/376 (51%), Gaps = 15/376 (3%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
PKA PL GL AV DLF I+G T G+P+W THS TS+ V+ +++ GA GKT
Sbjct: 36 PKAQKPLCGLGLAVKDLFHIQGLPTSAGNPDWLATHSIPENTSSCVAKMLQAGAVFKGKT 95
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+ DE AYS++G NKHY+T NPAAP+ +PGGSSSG+AVAV+A L D LG DT G +RVP
Sbjct: 96 ITDELAYSLHGQNKHYETLVNPAAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVP 155
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
S++ G+ G R ++G V+ ++ ++ S DTVGW RD L V +V + S
Sbjct: 156 SSYQGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLDTLTKVSNVCID-------SAT 208
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
QI I+ I A Q KS K + L E D S
Sbjct: 209 QIEISGT--PRFGIAAHLFEQAAHKSLCKTWLAA------LAENNDCITLSETQLDLDTL 260
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ R +Q E H EWIE+ +P + DI + I+ ++ K+ ++ + +
Sbjct: 261 QTAATFRTLQGNEIWQQHGEWIENTQPDIAKDIVLRLNWCKAITTQNVQQAKAQQSVVIN 320
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+++L +D +L+ PTT P+ E + +N +L +IA ++G Q+ +PL
Sbjct: 321 HLNALFEDIDVLIIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLPQLHLPLFTL 380
Query: 412 DKCPTSVSFIARHGGD 427
P +S + + G D
Sbjct: 381 HNAPCGLSLVGKKGND 396
>gi|159481398|ref|XP_001698766.1| amidase [Chlamydomonas reinhardtii]
gi|158273477|gb|EDO99266.1| amidase [Chlamydomonas reinhardtii]
Length = 507
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 200/414 (48%), Gaps = 33/414 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+FAV DLFD+ G+ TGFG+P W TH A+RT+ V L++ GAT GKT +DE
Sbjct: 82 PLKGLTFAVKDLFDVAGHRTGFGNPVWLDTHPPATRTAPAVQALLDAGATLRGKTHMDEL 141
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+NG N HY TP NPAAP ++PGGSSSG+AVA AA V +LG DT G VRVP+A+CG
Sbjct: 142 AYSLNGENVHYGTPRNPAAPGRIPGGSSSGSAVAAAAGDVPLALGSDTGGSVRVPAAYCG 201
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA--RDPKILRHVGHVLLQLPFAAQRSPRQII 234
+ G RP++G + G P++ S DT GW A ++ G V + L S R +
Sbjct: 202 LFGIRPTWGRTNLEGARPLAPSFDTAGWSALRAAVQVAVAAGDVDIGLGTDTGGSIR--V 259
Query: 235 IADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
A C L L+ RV + L R+ L + ++ P H + G
Sbjct: 260 PASFCGLLALRPTWGRVSSEATTALGSLATRRRCVPPGLCCW--TRHPGRPARHASPGGW 317
Query: 294 KNVM------------------RLIQRY--------EFKNNHNEWIESVKPALDPDISAE 327
V R+ R+ E H W+ PA P I
Sbjct: 318 WRVTPSGWPTRPQRRPSTTPCRRISARWAAPSARGFEVWREHGAWVTEHNPAFGPGIKDR 377
Query: 328 IGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN 387
I++ ++ R +RS + +LL DG+L PTT P P + + ++
Sbjct: 378 FIMASRITQEQVDAANVKRALIRSHLLTLLGSDGVLALPTTPGPAPLVNTPPAELDAWRT 437
Query: 388 RAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
R SL SIA ++G QV +P+ D P + I G D LL+ + + L
Sbjct: 438 RLISLTSIAGLAGLPQVNLPIASVDGLPVGLGLIGPPGSDEALLELAEQLMGVL 491
>gi|383756560|ref|YP_005435545.1| putative amidase family protein [Rubrivivax gelatinosus IL144]
gi|381377229|dbj|BAL94046.1| putative amidase family protein [Rubrivivax gelatinosus IL144]
Length = 403
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 201/411 (48%), Gaps = 19/411 (4%)
Query: 32 QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
Q AF+E ++ PP L GLSFAV D DI T +G W TH A+
Sbjct: 7 QSSNAFVELFEI-------PPYRSGALEGLSFAVKDNIDIRDRSTSYGSKPWRETHPPAA 59
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
+ V L+ GA C+GKTV DE YS++G N Y TP NP AP ++PGGSSSG+A AV
Sbjct: 60 HHAVCVEQLLMAGARCVGKTVADELTYSLDGENHFYGTPVNPRAPDRIPGGSSSGSASAV 119
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
A LVDF+LG D G +RVP++ CG+ G RPS +S G++P + S+ TVG AR +
Sbjct: 120 ACGLVDFALGTDCGGSIRVPASLCGVYGMRPSLHRISEAGVLPFAPSVSTVGVLARTLPV 179
Query: 212 LRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
LR VLL+ A R I + D FE+ AD ++ + F L H
Sbjct: 180 LRQAMRVLLRSQAQALPPVRNIYLLQDAFEI----ADPAIRDALSGCVASF--DGLPHVT 233
Query: 272 LGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
+ ++ L ++ E + +R++Q E N WI + +P P+ A +
Sbjct: 234 VKSISLREITGLDLSLRSYNE--DALRVLQTAEIANALGGWIRASQPEQGPNFRAGYRNV 291
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG---GKEMLSE-DYQN 387
+ + + ++ + + +++ + + PT PK G G+ + + DY +
Sbjct: 292 ESFDRSAMSDALNLCEALFARVAAFTRPGDVFCYPTVPVLAPKKGVLTGRNLDAVLDYYD 351
Query: 388 RAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
R ++ S A V+ ++TVPL D P +S A H D FLLD ++
Sbjct: 352 RTMAVTSFAGVARLPEITVPLAQVDGLPVGLSLAAGHYQDEFLLDASLRLW 402
>gi|410648703|ref|ZP_11359106.1| amidase [Glaciecola agarilytica NO2]
gi|410131712|dbj|GAC07505.1| amidase [Glaciecola agarilytica NO2]
Length = 404
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 177/380 (46%), Gaps = 21/380 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G+S AV DLF I+G T G+P+W +H T+ V TL+E GA +GKT+ DE A
Sbjct: 33 LSGVSLAVKDLFHIKGLPTTAGNPDWLASHPIPVHTAPAVETLLENGARLVGKTITDELA 92
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP N +AP ++PGGSSSG+AVAV LG DT G +RVP+++ G+
Sbjct: 93 YSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 152
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++G +S ++ ++ S DTVGW RD +L V V + I D
Sbjct: 153 FGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFF--------GDKHI---D 201
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS---LKGFHKTNG--E 292
D I + + + RQ E L + S V L+ ++ E
Sbjct: 202 DASNSQDIAQNSKIGFA-----QELARQCEYSEALTTAYHSMVEDPCILESGLSSDSLIE 256
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
R++Q YE H EWI P PDI I + + + S
Sbjct: 257 ASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRFAWCATIDNQQRQQALEKQAKFISH 316
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
I+ L ++ PTT P P + + Y+N L IA + G Q+ VPL
Sbjct: 317 INHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTLMKLTCIAGLCGLPQLHVPLPINP 376
Query: 413 KCPTSVSFIARHGGDRFLLD 432
P S I + D+ L++
Sbjct: 377 HAPMGFSLIGQKNHDKQLIE 396
>gi|319791578|ref|YP_004153218.1| amidase [Variovorax paradoxus EPS]
gi|315594041|gb|ADU35107.1| Amidase [Variovorax paradoxus EPS]
Length = 392
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 194/392 (49%), Gaps = 15/392 (3%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P+ PL+ LSFA DLFD+ GY TG G+P +RT+ V L++ GA
Sbjct: 14 PDAPVARAGTGPLSDLSFAAKDLFDVAGYPTGGGNPIVLAMSGIKTRTAPTVQKLLDAGA 73
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
GKTV DE A+S+NG N H+ P N AP ++ GGSSSG+A AV+++L DF+LG DT
Sbjct: 74 RFAGKTVTDELAFSMNGNNAHFGAPANGGAPLRITGGSSSGSASAVSSNLCDFALGTDTG 133
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P+ CG+ G RP++G VS G + ++ S DT GWFARD V VLL
Sbjct: 134 GSVRAPANHCGLYGLRPTHGRVSLEGALDLAPSFDTCGWFARDIGTFARVADVLLGADAQ 193
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
A +++ DD + L A +Q + L G + E FD+
Sbjct: 194 ALPERVRLLRPDDVWALAVPAAAEALQDAADRVQSLLGPAKGTTVAM-ESFDAMY----- 247
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+H R +Q E IE P L P ++ ++++ + +
Sbjct: 248 WH---------FRYLQSREAWLTDGPLIERYAPPLGPGVAERFAWSRDVTDAQVATARVF 298
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
R R+ +++LL DG+L+ PT P E EDY+NRA LL IA ++G Q++
Sbjct: 299 RTAFRAHLANLLGTDGVLLMPTMPDIAPLRSDSEASMEDYRNRAIRLLCIAGLAGFPQLS 358
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+PL D P +S + G DR L+ + +
Sbjct: 359 MPLATRDGAPLGISLLGPAGSDRSLIALAERI 390
>gi|410643240|ref|ZP_11353739.1| amidase [Glaciecola chathamensis S18K6]
gi|410137070|dbj|GAC11926.1| amidase [Glaciecola chathamensis S18K6]
Length = 404
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 177/380 (46%), Gaps = 21/380 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G+S AV DLF I+G T G+P+W +H T+ V TL+E GA +GKT+ DE A
Sbjct: 33 LSGVSLAVKDLFHIKGLPTTAGNPDWLASHPIPIHTAPAVETLLENGARLVGKTITDELA 92
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP N +AP ++PGGSSSG+AVAV LG DT G +RVP+++ G+
Sbjct: 93 YSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 152
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++G +S ++ ++ S DTVGW RD +L V V + I D
Sbjct: 153 FGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFF--------GDKHI---D 201
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS---LKGFHKTNG--E 292
D I + + + RQ E L + S V L+ ++ E
Sbjct: 202 DASNSQDIAQNSKIGFA-----QELARQCEYSEALTTAYHSMVEDPCILESGLSSDSLIE 256
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
R++Q YE H EWI P PDI I + + + S
Sbjct: 257 ASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRFAWCATIDNQQRQQALEKQAKFISH 316
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
I+ L ++ PTT P P + + Y+N L IA + G Q+ VPL
Sbjct: 317 INHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTLMKLTCIAGLCGLPQLHVPLPINP 376
Query: 413 KCPTSVSFIARHGGDRFLLD 432
P S I + D+ L++
Sbjct: 377 HAPMGFSLIGQKNHDKQLIE 396
>gi|354596671|ref|ZP_09014688.1| Amidase [Brenneria sp. EniD312]
gi|353674606|gb|EHD20639.1| Amidase [Brenneria sp. EniD312]
Length = 395
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 194/384 (50%), Gaps = 21/384 (5%)
Query: 49 PLPP----KAPH-PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEG 103
P PP AP PL+G +FAV DLFD+ GY TG G P RT+ V L++
Sbjct: 10 PYPPAAVEHAPQGPLSGFTFAVKDLFDVAGYPTGGGSPHILAMSGIKRRTAPTVRRLLDA 69
Query: 104 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGID 163
GA +GKT +E A+S++G N HY TP N AAP ++PGGSSSG+A AV+ L DF+LG D
Sbjct: 70 GAEFVGKTHTNEMAFSMSGKNAHYGTPRNGAAPERIPGGSSSGSAAAVSNRLCDFALGTD 129
Query: 164 TVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLP 223
T G +R P+++CG+ G RPS+G +S P++ S+DT G+F RD + VG LL
Sbjct: 130 TGGSIRTPASYCGLFGLRPSHGRISLDDCQPLAPSMDTAGYFTRDADLFERVGECLLGED 189
Query: 224 FAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSL 283
A Q +I+ F+LL + + ++ ++S + + G ++P+L
Sbjct: 190 DAPLPPQAQWVISHALFDLLPAASQQALRPALESIKDVAGEL--------SPLSGELPAL 241
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCK 343
+ E R IQ E E I AL PD++ +++ +N
Sbjct: 242 E-------EAYWAFRFIQGREAWLTQGEKITRYGFALGPDVAGRFAWGAGVTDEQYQNAC 294
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQ 403
+R R A +LL + ILV PT P L ++ E + + LLSIA + G Q
Sbjct: 295 RVRERFRDAWQALLGNR-ILVLPTVPDIAPLLDARDEDIEQTRQLSHHLLSIAVLCGIPQ 353
Query: 404 VTVPLGYYDKCPTSVSFIARHGGD 427
+ +PL Y + P +S I G D
Sbjct: 354 LNLPLTYKEGAPLGISLIGPRGSD 377
>gi|452963960|gb|EME69012.1| amidase [Magnetospirillum sp. SO-1]
Length = 391
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 186/386 (48%), Gaps = 25/386 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+FA D+FD+ GYVTG G+P+W R A T+ + TL+E GA +GKT DE
Sbjct: 23 PLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPARHTAWAIGTLLESGARLVGKTHTDEL 82
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
I G N HY TP NP AP +PGGSSSG+A AVA L +LG DT G RVP++FCG
Sbjct: 83 TRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLASMALGTDTAGSTRVPASFCG 142
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP+ G++ G++ S + DTVG A DP IL +G LL+ R P Q+++
Sbjct: 143 VFGLRPTLGSIPMDGVLSQSNTFDTVGLLADDPDILARMGEALLRKKIKDVR-PAQVVVL 201
Query: 237 DDCFELLKIPADRVVQVVIKSTEK-----LFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+D ++ + + + GR+V S VP N
Sbjct: 202 EDALAASDPAVAAAIEAALPRIKDAVAPIVRGRRV-----------SPVPLADWVEHQNA 250
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
IQ E EWI + P +++ ++S + + R R
Sbjct: 251 --------IQGREAWERFGEWINNSNPRFGFEVADNFLRGSKVSNRTLSAARGFRLRARR 302
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ L+ + +LV PTT P + + + ++R SL +IA ++GC Q+++PL
Sbjct: 303 WVQEALEGNAVLVLPTTPVTAPPVHSPRSVMWEIRHRIVSLTTIAGMAGCPQISLPLCTA 362
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNM 437
P +S I G D LL Q +
Sbjct: 363 GGLPVGLSLIGPRGSDALLLAAAQRI 388
>gi|332306574|ref|YP_004434425.1| Amidase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173903|gb|AEE23157.1| Amidase [Glaciecola sp. 4H-3-7+YE-5]
Length = 411
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 180/384 (46%), Gaps = 29/384 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G++ AV DLF I+G T G+P+W +H T+ V TL+E GA +GKT+ DE A
Sbjct: 40 LSGVTLAVKDLFHIKGLPTTAGNPDWLASHPIPVHTAPAVETLLENGAQLVGKTITDELA 99
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP N +AP ++PGGSSSG+AVAV LG DT G +RVP+++ G+
Sbjct: 100 YSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 159
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++G +S ++ ++ S DTVGW RD +L V V + I A
Sbjct: 160 FGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFF--------GDKHIDDAS 211
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSL--KGFHKTNG---- 291
+ Q + ++++ F +++ + E + S+ F +G
Sbjct: 212 NS------------QDIAQNSKIGFAQELAQQCEYSEALTTAYHSMVEAPFILESGLSSD 259
Query: 292 ---ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
E R++Q YE H EWI P PDI I + + +
Sbjct: 260 SLIEASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRFAWCATIDNQQRQQALEKQAK 319
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
S I+ L ++ PTT P P + + Y+N L IA + G Q+ VPL
Sbjct: 320 FISHINHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTLMKLTCIAGLCGLPQLHVPL 379
Query: 409 GYYDKCPTSVSFIARHGGDRFLLD 432
P S I + D+ L++
Sbjct: 380 PINPHAPMGFSLIGQKNHDKQLIE 403
>gi|407699706|ref|YP_006824493.1| amidase [Alteromonas macleodii str. 'Black Sea 11']
gi|407248853|gb|AFT78038.1| amidase [Alteromonas macleodii str. 'Black Sea 11']
Length = 409
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 195/378 (51%), Gaps = 19/378 (5%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
PKA PL GL AV DLF I+G T G+P+W THS TS+ V+ +++ GA GKT
Sbjct: 36 PKAQKPLCGLGLAVKDLFHIQGLPTSAGNPDWLATHSIPENTSSCVAKMLQAGAVFKGKT 95
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+ DE AYS++G NKHY+T NP AP+ +PGGSSSG+AVAV+A L D LG DT G +RVP
Sbjct: 96 ITDELAYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVP 155
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-- 229
S++ G+ G R ++G V+ ++ ++ S DTVGW RD L V +V + ++ S
Sbjct: 156 SSYQGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLDTLTKVSNVCIDSATQSEISGT 215
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
PR IA FE Q KS K + L E D S
Sbjct: 216 PR-FGIAAHLFE----------QAAHKSLCKTWLAA------LAENNDCITLSETQLDLD 258
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
+ R +Q E H EWIE+ +P + DI + I+ ++ K+ ++ +
Sbjct: 259 TLQTAATFRTLQGNEIWQQHGEWIENTQPDIAKDIMLRLDWCKTITTQEVQQAKAQQSVV 318
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
+ +++L +D +LV PTT P+ E + +N +L +I+ ++G Q+ +PL
Sbjct: 319 INHLNALFEDIDVLVIPTTPGVAPRCDADETTLANDRNTLLALTAISGLAGLPQLHLPLF 378
Query: 410 YYDKCPTSVSFIARHGGD 427
P +S + + G D
Sbjct: 379 TLHNAPCGLSLVGKKGND 396
>gi|239834477|ref|ZP_04682805.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ochrobactrum
intermedium LMG 3301]
gi|444310065|ref|ZP_21145692.1| amidase [Ochrobactrum intermedium M86]
gi|239822540|gb|EEQ94109.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ochrobactrum
intermedium LMG 3301]
gi|443486517|gb|ELT49292.1| amidase [Ochrobactrum intermedium M86]
Length = 395
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 190/395 (48%), Gaps = 43/395 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G AV D++D+ G VTG G+P+ A R++ VV L+ GA +GK DE
Sbjct: 25 PLEGERLAVKDIYDVAGMVTGCGNPQIEAESPRAERSAPVVERLLAAGAEFVGKAQTDEL 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+ G N H+ P NPAAP ++ GGSSSG+A AVA L D +LG DT G +R P++FCG
Sbjct: 85 AFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRAPASFCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G R ++G + GI+P++ SLDT+GWFARD ++ VG +LL
Sbjct: 145 LVGLRSTHGRIPLQGIMPLAPSLDTIGWFARDIELYDRVGAILL---------------G 189
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE--------YFDSKVPSLKGFHK 288
DD E + KL VL+ LGE F P G
Sbjct: 190 DDAREF--------------NLTKLLYMPVLEQLLLGEAETDAYRAMFAEVRPHFTGLKA 235
Query: 289 TN------GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
+ EL V R IQ E H WI S L P ++ EI+ ++ +
Sbjct: 236 ASQPTLSIDELYLVFRHIQGAEAWATHGGWISSGDRKLGPGVADRFAFGAEIAADLVASQ 295
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCC 402
+ R + + ++ +D +L PT P + Y+ +A LL ++ +SG
Sbjct: 296 RLRRAQFTQELEKIIGNDAVLALPTVPGAAPLAKEPFETLQAYREQALRLLCLSVLSGLP 355
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
Q+T+PLG P +SFI G DR L+ +N+
Sbjct: 356 QITLPLGQVQSAPFGISFIGPRGSDRALIALARNI 390
>gi|218202689|gb|ACK75962.1| amidase family protein [Proteus mirabilis]
Length = 408
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 203/416 (48%), Gaps = 29/416 (6%)
Query: 35 GAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTS 94
GAF+E + P + L GL+FAV D DI Y T +G P W H AA +
Sbjct: 8 GAFVETFTI-------EPYSNGSLNGLTFAVKDNIDIAQYKTSYGSPSWQHKHKAAIYNA 60
Query: 95 TVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAAD 154
V L+ GATC+GKTV DEF YS++G N + TP NP P ++PGGSSSG+A AVA
Sbjct: 61 LCVDQLLGAGATCLGKTVSDEFTYSLDGENFFFGTPINPKVPDRIPGGSSSGSASAVACG 120
Query: 155 LVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRH 214
LVDF++G D+ G +RVP++ CG+ RP+ +S G++P S TVG FA D +L
Sbjct: 121 LVDFAIGTDSAGSIRVPASLCGVYAMRPTMHRISEAGVLPFVPSTSTVGAFANDIDVLGD 180
Query: 215 VGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE 274
V H LL+ + I + +D F +D V +IK + NL
Sbjct: 181 VMHTLLKSESVVSQKIETIYLLEDAFN----TSDAEVSALIKDSIN----------NLLV 226
Query: 275 YFDSKVPSLK-----GFHKTNGELK-NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
D+ V S+ G T L N +R +Q +EF N WIE P L P + +
Sbjct: 227 NIDADVVSITLSDILGEEATLDMLNVNALRPLQTFEFLNTVGNWIEHESPELSPFFAMKY 286
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTT-AYPPPKLGGKEMLSE-DYQ 386
+ + ++ + + +SS LK +++ PT P K ++M + D+
Sbjct: 287 ETVRKFERKLVSDSLRLCERYFRRMSSFLKKGDLVLFPTVPTVAPLKHSLEDMETALDFY 346
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
+R S+ S + + ++++P+ D P +S A D FL+ +V+ ++ +
Sbjct: 347 DRTMSITSFSGIGRLPEISIPIANIDNAPVGLSVAAGFYQDEFLISSVKQLFCEVM 402
>gi|338980776|ref|ZP_08632030.1| Amidase [Acidiphilium sp. PM]
gi|338208301|gb|EGO96170.1| Amidase [Acidiphilium sp. PM]
Length = 389
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 181/374 (48%), Gaps = 27/374 (7%)
Query: 55 PH-PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PH PL GL V DLFDI G VT FG+P+W R A + +VS L+E GA GKT
Sbjct: 25 PHGPLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTT 84
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
E A+ + G N HY TP NPAAP ++PGGSSSG+ VA+ +G DT G VR+P++
Sbjct: 85 VELAFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPAS 144
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
+CG+ G RP+ G +S G P++ S DT GWF D + + VG L
Sbjct: 145 YCGLYGLRPTQGLLSLAGAAPLAPSFDTPGWFTCDAETMLRVGEAL------------LP 192
Query: 234 IIADDCFELLKIPA--DRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ L IPA V+ + E R LG ++ P +G +
Sbjct: 193 PAPPLAAQFLMIPAAFANADPDVVAALEPALAR-------LGPMGEAD-PVPEGLDRML- 243
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+N +R + + +IE+VKP LDP + I + + R +
Sbjct: 244 AWQNAVRGRETWLTLGG---FIETVKPLLDPVTAGRIAATRGFTAEAAAEGRVARRAHTA 300
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ +LL +LV PT+ P P + ++ + ED + R + IA+ +G ++T+P+G
Sbjct: 301 RMHALLAGGAVLVIPTSPCPAPPVAAEQAVYEDVRTRTLRVGIIAAFAGLPELTIPVGKV 360
Query: 412 DKCPTSVSFIARHG 425
+ P +S IA G
Sbjct: 361 NGAPVGLSLIAGPG 374
>gi|23015866|ref|ZP_00055631.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
related amidases [Magnetospirillum magnetotacticum MS-1]
Length = 391
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 189/391 (48%), Gaps = 35/391 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+FA D+FD+ GYVTG G+P+W R A +T+ VS L+E GA +GKT DE
Sbjct: 23 PLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPAKQTAWAVSALLESGARLVGKTHTDEL 82
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
I G N HY TP NP AP +PGGSSSG+A AVA L +LG DT G RVP++FCG
Sbjct: 83 TRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLASMALGTDTAGSTRVPASFCG 142
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP+ G + G++ S + DTVG A D +IL +G LL+ R P Q ++
Sbjct: 143 VYGLRPTLGTIPMDGVLSQSNTFDTVGLLADDAEILGLMGEALLRKKIKDVR-PAQAVVL 201
Query: 237 DDCFE----------LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+D E +P R+ V T GR+V S VP
Sbjct: 202 EDAMEASDPAVAAAIEAALP--RIKDAVAPITR---GRKV-----------SPVPLADWV 245
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
N IQ E EWI + P +++ ++S+ + + R
Sbjct: 246 EHQNA--------IQGREAWERFGEWINNSNPRFGFEVADNFLRGSKVSQRTLSAARGFR 297
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
+ + L+ + +LV PTT P + + + ++R SL +IA ++GC Q+++
Sbjct: 298 LRAKRWVQEALEGNAVLVLPTTPVTAPPVHSPRSVMWEIRHRMVSLTTIAGMAGCPQISL 357
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
PL D P +S I G D LL + +
Sbjct: 358 PLCKVDGLPVGLSLIGPRGSDALLLAAARRI 388
>gi|357023041|ref|ZP_09085256.1| amidase [Mesorhizobium amorphae CCNWGS0123]
gi|355545028|gb|EHH14089.1| amidase [Mesorhizobium amorphae CCNWGS0123]
Length = 399
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 195/395 (49%), Gaps = 37/395 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHP-EWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL GL AV D++D+ GY TG G+P ++A H AAS+T+ V +++ GA +GKT DE
Sbjct: 26 PLAGLRLAVKDIYDVAGYRTGCGNPRKFAEAH-AASQTAEAVQVILDAGARFVGKTQTDE 84
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A+S+ G N H+ P NPAAP ++ GGSSSG+A AVA L D ++G DT G +R P++FC
Sbjct: 85 LAFSLMGQNAHFPFPVNPAAPDRVTGGSSSGSAAAVAGGLADIAVGSDTGGSIRAPASFC 144
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G++G R ++G +S G + ++ SLDT GWFA D + VG +LL R P Q +
Sbjct: 145 GLIGLRTTHGRISLEGAMKLAPSLDTFGWFADDIETYEAVGKLLL------GRDPHQHAL 198
Query: 236 AD-------DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHK 288
D F + PA+ +K+ F P F
Sbjct: 199 NRPLSIGWLDAF--VTGPAEAAEYAEMKA-------------RAAAVFGEPAPVDYSFAS 243
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
EL R +Q YE H EWI + +P L P + + E + R
Sbjct: 244 VPDELYWCFRRLQAYEAWQVHGEWITAGEPRLGPGVDERFSFGRAVDARTAEAETARRLV 303
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
RS ++ LL + G L+ PT P P + G + Y+ RA LL ++ +SG Q+T+PL
Sbjct: 304 FRSELARLLGNHGFLLLPTVPGPAPLVNGTAEQLQAYRERALHLLCLSGLSGFPQITLPL 363
Query: 409 GYYDKCPTSVSFIARHGGD-------RFLLDTVQN 436
G D P +S + G D R LLD +
Sbjct: 364 GSVDGAPFGLSLVGPSGSDIALIRLGRKLLDAARK 398
>gi|406669781|ref|ZP_11077044.1| hypothetical protein HMPREF9707_00947 [Facklamia ignava CCUG 37419]
gi|405581751|gb|EKB55760.1| hypothetical protein HMPREF9707_00947 [Facklamia ignava CCUG 37419]
Length = 411
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 187/379 (49%), Gaps = 31/379 (8%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G++FAV D+FDI G GHP W +TH A+ TS+ + ++E GA +GKT+
Sbjct: 37 AEGPLKGMAFAVKDVFDIVGSTYSNGHPMWLQTHEPATETSSFIVNMLEAGADLVGKTIC 96
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DE YSI+G N +Y +P NP P + GGSSSG AVA VD + G D +G VRVP+A
Sbjct: 97 DELCYSISGENWNYGSPLNPHDPRRYCGGSSSGTGAAVAGGYVDVAFGSDCLGSVRVPAA 156
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
+ G+LG RP+ V + G P S+D +G+ A+DP + V +L Q R
Sbjct: 157 YNGVLGIRPTLYRVDNSGEAPYCKSMDVLGYVAQDPDVFEQVSEFILGEDQHQQSLKRLF 216
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
I D LL + D V + + S ++ G YFD V G+L
Sbjct: 217 IPVD----LLDVVDDNVREHLKSSIGRIKG-----------YFDEVVEG----KICPGDL 257
Query: 294 KN---VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVI----ENCKSIR 346
++ V + IQ YE ++ W +P L S G LE + T+ + R
Sbjct: 258 QDWVKVFQHIQGYEVWESYGGWYRKYRPQL----SEGPGSRLEWASTITYAQYQAALEAR 313
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
E+ + ++ +D ++V PT A P E + ++ LL I+ +SG QVT+
Sbjct: 314 EEIIKQVDQVITEDTVVVLPTAASIAPLRTDSEESINHTRLQSSQLLCISPLSGVPQVTL 373
Query: 407 PLGYYDKCPTSVSFIA-RH 424
P+ ++ P VS ++ RH
Sbjct: 374 PIATMEEVPLGVSLLSPRH 392
>gi|424014997|emb|CCM43858.1| amidase family protein [Janthinobacterium agaricidamnosum]
Length = 430
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 186/390 (47%), Gaps = 28/390 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL A D+F + G G G+P W AS ++ + L+ GA +GKTV DE A
Sbjct: 61 LGGLRLAAKDVFALAGQRIGAGNPAWLAGQQPASGSALAIELLLGAGAAWVGKTVTDELA 120
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+S+ G N+HY TP NPA+P ++PGGSSSG+AVAVAA D +LG D G R+P+++CGI
Sbjct: 121 FSLMGINRHYGTPVNPASPLRLPGGSSSGSAVAVAAGHADIALGTDCGGSCRLPASYCGI 180
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP+ G ++ G ++ S DTVGWFA D L V VL Q ++ + + I+D
Sbjct: 181 WGIRPTQGVIAKNGCFALAHSFDTVGWFAADGASLGAVFKVLAQQEIPSKHA-AVLHISD 239
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL---- 293
D +R + + +L FD + H +G L
Sbjct: 240 DALAGCSPAVNRAFEAALA--------------DLAARFDKR-------HVPSGRLPLPP 278
Query: 294 -KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
R++Q E H W+ + +L D+ ++ + + + +R + +
Sbjct: 279 WAQAHRVLQSAEIWQQHGAWVTAHGDSLGSDVRRRFDNAAAVTRQDVSSQQIVRIQAMTT 338
Query: 353 ISSLLKD-DGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+++LL L+ PT P + + ++ A LL IA ++G QV++P
Sbjct: 339 LTALLPGLHDFLLLPTAPDIAPLCDASDATLDHHRINAQHLLCIAGLAGLPQVSMPWIQI 398
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
D P +S I G D L+ Q ++A+L
Sbjct: 399 DGAPVGLSLIGCRGNDAGLIAAAQAVHATL 428
>gi|152981287|ref|YP_001352460.1| amidase [Janthinobacterium sp. Marseille]
gi|151281364|gb|ABR89774.1| amidase [Janthinobacterium sp. Marseille]
Length = 408
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 192/415 (46%), Gaps = 37/415 (8%)
Query: 35 GAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTS 94
GAF+ + LP LP + L G+ FAV D+FDI G TG G+P W + AA++ +
Sbjct: 21 GAFLAEAFGLPLQAHLPLG--NKLEGVRFAVKDVFDIAGTRTGAGNPVWLSGNPAANKHA 78
Query: 95 TVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAAD 154
V L+ GA +GKT+ DE YS+ G N HY P NPA+P ++PGGSSSG+ AVAA
Sbjct: 79 AAVERLLSDGARFVGKTLTDELTYSLAGINAHYGVPRNPASPDRLPGGSSSGSVAAVAAG 138
Query: 155 LVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRH 214
L D +LG D G VR+P+++CG+ G RP++G +S G + ++ S DTVGWFA L H
Sbjct: 139 LADIALGTDCGGSVRLPASYCGVWGMRPTHGRLSGHGCLTLAHSFDTVGWFA---DTLEH 195
Query: 215 VGHVLLQLPFAAQRS-PRQIIIADDC-FELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
+ L A S P + +D L PA V + KL Q
Sbjct: 196 LEQTFCALAHAETTSMPATFLTLNDSGINGLLDPA------VFDAFSKLKNEQ------- 242
Query: 273 GEYFDSKVPSLKGFHKTNGELK-----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAE 327
F + EL+ R++Q E H W+ L DI
Sbjct: 243 -----------SDFLAVDSELELASWAAAFRILQASEAWMEHGLWVTQHADELGVDIRQR 291
Query: 328 IGEMLEISETVIENCKSIRNEMRSAISSLLKDDG-ILVTPTTAYPPPKLGGKEMLSEDYQ 386
++ T + + +R ++ +L ++V PT P P L +D +
Sbjct: 292 FNIAAGVTATQVRTAQEVRIAAIRELNRILDSQHKVIVLPTVPTPAPLLTADSATVDDVR 351
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
R+ LL IA ++G Q+++P + P +S I G D +L + A +
Sbjct: 352 MRSQHLLCIAGLAGLPQLSMPWIQVNGAPVGLSIIGGRGCDEIVLHAAHKLQARI 406
>gi|406596410|ref|YP_006747540.1| amidase [Alteromonas macleodii ATCC 27126]
gi|406373731|gb|AFS36986.1| amidase [Alteromonas macleodii ATCC 27126]
Length = 421
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 193/373 (51%), Gaps = 19/373 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL AV DLF IEG T G+P+W TH+ T+ V+ +++ GAT GKT+ DE
Sbjct: 53 PLSGLGLAVKDLFHIEGLPTAAGNPDWLATHAIPKNTNRCVAKMLQAGATFKGKTITDEL 112
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS++G NKHY+T NP AP+ +PGGSSSG+AVAV+A L D LG DT G +RVPS++ G
Sbjct: 113 AYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPSSYQG 172
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ--RSPRQII 234
+ G R ++G V+ ++ ++ S DTVGW RD L V +V + ++ SPR
Sbjct: 173 LWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLNTLTKVANVCIDSATQSEISGSPR-FG 231
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
IA FE Q KS K + L + D V S +
Sbjct: 232 IAAHLFE----------QAAHKSLCKTW------LAALADNNDCIVLSETQLDLKTLQTA 275
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
R +Q E H EWIE +P + DI + I+ +E K+ ++ + + ++
Sbjct: 276 ATFRTLQGNEIWQQHGEWIEYTQPDIAKDIMLRLNWCKTITTQEVEQAKAQQSVVINHLN 335
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
+L ++ +L+ PTT P+ E + +N +L +IA ++G Q+ +PL
Sbjct: 336 TLFEEIDVLIIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLPQLHLPLFTLHNA 395
Query: 415 PTSVSFIARHGGD 427
P +S + + G D
Sbjct: 396 PCGLSLVGKKGND 408
>gi|430810132|ref|ZP_19437247.1| amidase [Cupriavidus sp. HMR-1]
gi|429497366|gb|EKZ95899.1| amidase [Cupriavidus sp. HMR-1]
Length = 396
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 191/396 (48%), Gaps = 15/396 (3%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P+P A PL GL+FAV DLFD+ GY TG G+P + T+ V L++ GA
Sbjct: 15 PDAPVPNAASGPLHGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLLDAGA 74
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GK DE A+S+NG N HY P N AP ++ GGSSSG+A AV+ L DF+LG DT
Sbjct: 75 AFVGKVHTDELAFSMNGQNHHYGGPYNGTAPDRITGGSSSGSASAVSNKLCDFALGTDTG 134
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P++ CG+ G RPS+G +S +P+ +LDT G+FARD V VLL
Sbjct: 135 GSVRAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLLGADAN 194
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
S ++++A D FEL A + + E + G K +
Sbjct: 195 PLPSQPRLLLAADLFELPTPEARKALAPAAARIEAVLG---------------KASPVDV 239
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+ +L R +Q +E IE+ L PD++ E++ E ++
Sbjct: 240 ADRPLSDLYWAFRYVQGWEAWRADGALIENYGLQLGPDVAGRFAFSKEVTAAQFEKSSAV 299
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
R E + + LL DGIL+ PT P EDY+ A L + ++G Q++
Sbjct: 300 RREFTAHLGRLLGQDGILLLPTMPDIAPLRTTPMEALEDYRTTAAHTLCLTPLTGFPQLS 359
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
+PL D P +S I G DR L+ + + ++
Sbjct: 360 LPLSGRDGAPLGLSLIGPMGSDRSLIAVAETLMTAI 395
>gi|407683360|ref|YP_006798534.1| amidase [Alteromonas macleodii str. 'English Channel 673']
gi|407244971|gb|AFT74157.1| amidase [Alteromonas macleodii str. 'English Channel 673']
Length = 421
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 19/373 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL AV DLF IEG T G+P+W THS T+ V+ +++ GA GKT+ DE
Sbjct: 53 PLSGLGLAVKDLFHIEGLPTAAGNPDWLATHSIPKNTNRCVAKMLQAGAAFKGKTITDEL 112
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS++G NKHY+T NP AP+ +PGGSSSG+AVAV+A L D LG DT G +RVPS++ G
Sbjct: 113 AYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPSSYQG 172
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ--RSPRQII 234
+ G R ++G V+ ++ ++ S DTVGW RD L V +V + ++ SPR
Sbjct: 173 LWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLNTLTKVANVCIDSATQSEISGSPR-FG 231
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
IA FE Q KS K + L + D V S +
Sbjct: 232 IAAHLFE----------QAAHKSLCKTW------LAALADNNDCIVLSETQLDLKTLQTA 275
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
R +Q E H EWIE +P + DI + I+ +E K+ ++ + + ++
Sbjct: 276 ATFRTLQGNEIWQQHGEWIEYTQPDIAKDIMLRLNWCKTITTQEVEQAKAQQSVVINHLN 335
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
+L ++ +L+ PTT P+ E + +N +L +IA ++G Q+ +PL
Sbjct: 336 TLFEEIDVLIIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLPQLHLPLFTLHNA 395
Query: 415 PTSVSFIARHGGD 427
P +S + + G D
Sbjct: 396 PCGLSLVGKKGND 408
>gi|407782720|ref|ZP_11129930.1| amidase [Oceanibaculum indicum P24]
gi|407205378|gb|EKE75351.1| amidase [Oceanibaculum indicum P24]
Length = 391
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 194/383 (50%), Gaps = 20/383 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GLSFA DLFD+ G+ TG G+ +WA+ + + + V L++ GAT IGKT+ DE
Sbjct: 23 PLSGLSFAAKDLFDVAGHPTGGGNHDWAKNYRVPTAHAWTVQALLDAGATLIGKTITDEV 82
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
+ I G + + TP N AAP ++PGGSSSG+A AVAA L D +LG DT G VRVPS+FCG
Sbjct: 83 SLGIFGESAYDGTPLNSAAPDRVPGGSSSGSAAAVAAGLCDTALGTDTGGSVRVPSSFCG 142
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ--LPFAAQRSPRQII 234
+ G RP++G VS G++P + S DT GWFARD V VLLQ +P A P +++
Sbjct: 143 LYGIRPTHGRVSVAGLMPQAPSSDTAGWFARDAATFARVSAVLLQEAIPEAL---PTKLL 199
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
IA D F ++ +++ L G E P L + +
Sbjct: 200 IATDAFGFADEALAAALRPMVERLSSLLGAS--------EEVLMAPPGLSVWGRAQ---- 247
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
R++Q YE W+ES P L ++ + ++++ +R E+R +
Sbjct: 248 ---RVLQPYEAWQTFQPWLESANPRLAFTVARGLIAGSQVTQEERNWANLMRQEVRGRLR 304
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
LL IL PTT +P P G + ++R L + ++G QV +P D
Sbjct: 305 YLLPAGTILCLPTTPFPAPLRGRSVPDQQADRDRILCLCAHGGLAGMPQVNLPGSMVDGL 364
Query: 415 PTSVSFIARHGGDRFLLDTVQNM 437
P +S + G D L+ + M
Sbjct: 365 PIGLSVLGGPGTDATLIAVAKAM 387
>gi|153011561|ref|YP_001372775.1| amidase [Ochrobactrum anthropi ATCC 49188]
gi|151563449|gb|ABS16946.1| Amidase [Ochrobactrum anthropi ATCC 49188]
Length = 395
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 191/389 (49%), Gaps = 31/389 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G AV D++D+ G TG G+P+ A R++ VV L+ GA +GK DE
Sbjct: 25 PLKGERLAVKDIYDVAGMATGCGNPQIEAESPRAERSAPVVEKLLAAGAEFVGKAQTDEL 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+ G N H+ P NPAAP ++ GGSSSG+A AVA L D +LG DT G +R P++FCG
Sbjct: 85 AFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRAPASFCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G R ++G + GI+P++ SLDT+GWFARD + VG +LL
Sbjct: 145 LVGLRTTHGRIPLEGIMPLAPSLDTIGWFARDIDLYDRVGSILL---------------G 189
Query: 237 DDCFELLKIPADRVVQVVIKST--EKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN---- 290
+D E R+ Q++ + L G+Q + + F P G +
Sbjct: 190 NDAREF------RLTQLLYMPVLEQLLLGQQ--ETDAYRTMFAQVRPHFSGLKAASQPTL 241
Query: 291 --GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
EL V R IQ E H WI S L P ++ EI+ ++ + + R +
Sbjct: 242 SIDELYLVFRHIQGAEAWATHGGWISSGDRKLGPGVADRFAFGAEIAADLVASQRMRRAQ 301
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+ ++ +D +L PT P + Y+ +A LL ++ +SG Q+T+PL
Sbjct: 302 FTQELEQIVGNDAVLALPTVPGAAPLAKEPFETLQAYREQALRLLCLSVLSGLPQITLPL 361
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
G P +SFI G DR L+ +N+
Sbjct: 362 GQVQGAPFGISFIGPRGSDRALIGLAKNI 390
>gi|407780206|ref|ZP_11127451.1| amidase [Nitratireductor pacificus pht-3B]
gi|407297973|gb|EKF17120.1| amidase [Nitratireductor pacificus pht-3B]
Length = 416
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 193/378 (51%), Gaps = 21/378 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+ V D++D+ GY TG G+P+ A+ T+ + L++ GA +GKT DE
Sbjct: 47 PLAGLTMGVKDMYDVAGYPTGGGNPDRETVSGPAAETAPAIQALLDAGARFLGKTQTDEL 106
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
YS+ G N H+ P N AAP ++ GGSSSG+A AVA L D ++G DT G +R+P++FCG
Sbjct: 107 TYSMIGMNAHFPAPVNRAAPQRVTGGSSSGSAAAVAGGLADIAVGSDTNGSIRIPASFCG 166
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+LG R ++G + G +P++ S DT+GWFA D + VG VLL ++P +
Sbjct: 167 LLGLRTTHGRIPLTGAMPLAPSFDTLGWFAADSTVYAKVGEVLLGE--DTHKTPLAKPVR 224
Query: 237 DDCFE-LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
+ E LL +R + RQV++H FD + P+ + L
Sbjct: 225 LEALESLLFGEQEREAYAAML-------RQVVRH------FDRQ-PAFLALPEPPDVLFG 270
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R IQ +E H +I KP L P + I +EN + R ++ S+
Sbjct: 271 HFRAIQAFEAWQAHGSFITQAKPVLGPGVRERFAYARGIGNEALENARHGRRRLQQEFSA 330
Query: 356 LLKDDGILVTPT--TAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
L DD +LV PT TA P +E+ + Y+ RA +L + A + G Q+++P+G
Sbjct: 331 LFDDDMVLVLPTQPTAAPLKSATLEEL--DSYRARALTLTAFAGLLGWPQISIPVGQVHD 388
Query: 414 CPTSVSFIARHGGDRFLL 431
P +S + G DR L+
Sbjct: 389 APFGISLLGPAGSDRQLI 406
>gi|433773331|ref|YP_007303798.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
gi|433665346|gb|AGB44422.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
Length = 398
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 201/410 (49%), Gaps = 27/410 (6%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F AF++ Q+ P+ PL GL AV D++D+ GY TG G+ + AASRT
Sbjct: 8 FNAFLDLRQM-----PVAHAELGPLAGLRLAVKDIYDVAGYRTGCGNLQKFANGHAASRT 62
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ V +++ GA IGKT DE A+++ G N H+ P NPAAP ++ GGSSSG+A AVA
Sbjct: 63 APAVQAILDAGARFIGKTQTDELAFALFGQNAHFPFPVNPAAPDRVTGGSSSGSAAAVAG 122
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D + G DT G +R P++FCG++G R ++G +S G + ++ S DT GWFA D +
Sbjct: 123 RLADIATGSDTGGSIRAPASFCGLIGLRTTHGRISLDGTMQLAPSFDTFGWFADDIETYE 182
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG 273
VG +LL R P Q + D L + D + V + + G + L +G
Sbjct: 183 TVGKLLL------GRDPHQHSL-DRPLALSWL--DEM--VARPAAAEYAGMKAL----VG 227
Query: 274 EYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE 333
F + F + EL R +Q E H EWI S + L P + G
Sbjct: 228 TVFGTPAMPTTRFSSSPDELYWCFRRLQAREAWTVHGEWITSGERELGPGVEERFGFGRA 287
Query: 334 ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL 393
+ + + K R R +S+LL DG LV PT P P + + Y+ RA LL
Sbjct: 288 VDDRTAQTEKVRRLTFRGELSALLGKDGFLVLPTVPGPAPYIDSTPEQFQAYRERALHLL 347
Query: 394 SIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGD-------RFLLDTVQN 436
+A +SG Q+T+P+G P +S + G D R LLD Q
Sbjct: 348 CLAGLSGFPQITLPIGSVAGAPFGLSLLGPSGSDIGLIRLGRKLLDAAQR 397
>gi|359396853|ref|ZP_09189904.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Halomonas
boliviensis LC1]
gi|357969531|gb|EHJ91979.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Halomonas
boliviensis LC1]
Length = 416
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 209/428 (48%), Gaps = 31/428 (7%)
Query: 32 QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS 91
Q AF+E ++ P A L GL FAV D DI T +G W H A+
Sbjct: 7 QSSNAFVELFEI-------APYASGTLDGLCFAVKDNIDIRDRFTSYGSKPWREAHPRAA 59
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
+ V L+ GA C+GKT+ DEF YS++G + Y TP NP AP ++PGGSSSG+A AV
Sbjct: 60 YNAVCVEQLLMAGARCVGKTIADEFTYSLDGESYFYGTPVNPRAPDRIPGGSSSGSASAV 119
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
A LVDF+LG D G +R+P++ CG+ G RPS +S G++P + S+ TVG A++ I
Sbjct: 120 ACGLVDFALGTDCGGSIRIPASLCGVFGMRPSLHRISEAGVLPFAPSVSTVGVLAQNLPI 179
Query: 212 LRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
LR VLL+ A + I + + F L AD +Q + + + H
Sbjct: 180 LRQTMRVLLRSHDVAVPPVKNIYLVKEAFAL----ADPAIQNALS--------ECITH-- 225
Query: 272 LGEYFDSKVP--SLKGFHKTNGELK----NVMRLIQRYEFKNNHNEWIESVKPALDPDIS 325
LG + + V SL+ + LK + +R++Q E N WI+ +P P+
Sbjct: 226 LGNFPNVTVASVSLRDITGLDVSLKSCNEDALRILQTAEVANAIGGWIQENRPEQGPNFQ 285
Query: 326 AEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG---GKEMLS 382
A + + + + + ++ + S +++ + I PT PK G G + S
Sbjct: 286 AGYRNVEQFDRSTMSDALNLCEALFSRVAAFTQPGDIFCYPTAPVLAPKKGTLTGSNLNS 345
Query: 383 E-DYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
DY +R ++ S A V+ ++T+PL + P +S A H D FLLD +++ S
Sbjct: 346 VLDYYDRTMAVTSFAGVARLPEITIPLAQVNGIPVGLSLTAGHYQDEFLLDASLHLWGSQ 405
Query: 442 QEQADIAT 449
D+ +
Sbjct: 406 PVGLDLCS 413
>gi|410636966|ref|ZP_11347554.1| amidase [Glaciecola lipolytica E3]
gi|410143345|dbj|GAC14759.1| amidase [Glaciecola lipolytica E3]
Length = 395
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 184/386 (47%), Gaps = 32/386 (8%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
KAP PL G + AV DLF I+G VT G+P+WA +H ++TS VS L++ G +GKT+
Sbjct: 24 KAPQPLKGWTLAVKDLFHIDGIVTSAGNPDWADSHPLPTKTSETVSRLLDAGVQYVGKTI 83
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
DE AYS+NG N HY N ++ GGSSSG+AVAV L LG DT G +R+P+
Sbjct: 84 TDELAYSLNGQNIHYPALVNCLDNERICGGSSSGSAVAVGRKLARIGLGTDTGGSIRIPA 143
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
++ G++GFRPS+G +S ++P++ S DT GW + + +G LL Q
Sbjct: 144 SYNGLVGFRPSHGLISLKDVVPLAPSFDTAGWITNNIEDAVEIGKFLLPKSVEKHFMAAQ 203
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKV-----PSLKGFH 287
++ ++ +++S E K+E L + DSK SL
Sbjct: 204 PLVLNN---------------LVESCE-------FKNE-LYTWLDSKFDKNWQSSLAVTS 240
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
+ + + R++Q E H +WI++ +P DI +S + +I
Sbjct: 241 ELLKDASDAFRVLQGREIWQTHGDWIKNTQPRFADDIQQRFQWCSTLSAN--DELAAIEQ 298
Query: 348 EMR--SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
+ R +S +L +V PTT P P+ +Y+ + IA ++GC Q+
Sbjct: 299 QQRLIKTVSLILNQQHYIVIPTTPGPAPRRDTSAREIAEYRKKLMQFTCIAGLTGCPQLH 358
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+PL VS I D LL
Sbjct: 359 MPLFQQKNTAYGVSIIGPKNSDLELL 384
>gi|329902981|ref|ZP_08273325.1| Amidase [Oxalobacteraceae bacterium IMCC9480]
gi|327548533|gb|EGF33197.1| Amidase [Oxalobacteraceae bacterium IMCC9480]
Length = 562
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 193/390 (49%), Gaps = 30/390 (7%)
Query: 52 PKAP-----HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGAT 106
P AP PL+GL+FAV D+FD+ GY TG G+P +++VV TL E GA+
Sbjct: 184 PDAPVAAGTGPLSGLTFAVKDIFDVAGYPTGCGNPHMLALSGIKPASASVVRTLAEAGAS 243
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
+GKT DE A+S+NG N H+ TP N AP ++PGGSSSG+A AV+ L D +LG DT G
Sbjct: 244 FVGKTCTDELAFSMNGKNAHFGTPRNGGAPDRIPGGSSSGSASAVSNGLADIALGTDTGG 303
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-----Q 221
VR P++ CG++G RP++ VS G + ++ DT GWF RD VG VLL
Sbjct: 304 SVRAPASHCGLVGLRPTHARVSLQGAMDLAPDFDTCGWFTRDIDTFARVGDVLLGDDTCA 363
Query: 222 LPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP 281
LP A Q ++ + + RV QV + E+L HE + P
Sbjct: 364 LPDAPQVLLAVDVL--------DLLSPRVQQVFADALERLSPVLGTLHE-----VTTAAP 410
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
S + R IQ Y+ H IE L P ++ ++ +
Sbjct: 411 SFDALYW-------AFRHIQGYQAWQQHGACIEQYGLQLGPGVADRFSWSRTVTAAQMLE 463
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC 401
+IR + ++LL +D ++V P+ P L E E+Y+N+A +L ++ +SG
Sbjct: 464 YSAIRATFAAHFAALLGNDKVMVLPSMPDIAPLLTDSETALENYRNQAIRMLCLSGLSGL 523
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
Q+++PL D P S I G D+ L+
Sbjct: 524 PQISLPLMTIDGAPFGFSVIGPAGSDQSLI 553
>gi|347820309|ref|ZP_08873743.1| amidase [Verminephrobacter aporrectodeae subsp. tuberculatae At4]
Length = 400
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 193/392 (49%), Gaps = 26/392 (6%)
Query: 52 PKAP-HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGK 110
P AP PLT L F V DLFD+ GY TG G+P +R++ V L++ GA GK
Sbjct: 20 PAAPTGPLTDLRFGVKDLFDVAGYPTGGGNPILLALSGIKTRSAPTVQKLLDAGARFAGK 79
Query: 111 TVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
TV DEFA+S+NG N H+ P N AA ++ GGSSSG+A V++ L DF+LG DT G VR
Sbjct: 80 TVTDEFAFSMNGNNAHFGAPLNGAARERITGGSSSGSASVVSSGLCDFALGTDTGGSVRA 139
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-----QLPFA 225
P+ CG+ G RP++G VS G + ++ S DT GWFARD V VLL LP
Sbjct: 140 PANHCGLYGLRPTHGRVSLEGALDLAPSFDTCGWFARDVGSFARVADVLLGADAKPLP-- 197
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
QR PR ++ D + +L+ P + + + L G L E +D+
Sbjct: 198 -QR-PR-LLWPKDIWAMLEAPVRDALDGTAQRVQSLLGPATPLDVVL-ESWDA------- 246
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+ R +Q E IE P L PD++ +++ + ++
Sbjct: 247 -------MYWNFRYLQGREAWLTDGPLIERYAPPLGPDVAERFAWSRAVTDAQVNTARAF 299
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
R + R+ ++ L DG+L+ P+ P EDY+NRA +L +A + G Q++
Sbjct: 300 RLDFRARLAQTLGSDGVLLMPSMPDIAPLRNATGSSLEDYRNRAIRMLCLAGLGGFPQLS 359
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+PL P +S + G DR L+ Q +
Sbjct: 360 MPLAQRAGAPLGISLLGPAGADRSLVALAQRI 391
>gi|319781639|ref|YP_004141115.1| amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167527|gb|ADV11065.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 398
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 194/393 (49%), Gaps = 34/393 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH-PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL GL AV D++D+ GY TG G+ ++A +H AASRT+ V +++ GA +GKT DE
Sbjct: 26 PLAGLRLAVKDIYDVAGYRTGCGNLQKFAESH-AASRTAPAVQMILDAGARFVGKTQTDE 84
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A+++ G N H+ P NPAAP ++ GGSSSG+A AVA L D + G DT G +R P++FC
Sbjct: 85 LAFALFGQNAHFSFPVNPAAPDRVTGGSSSGSAAAVAGRLADIATGSDTGGSIRAPASFC 144
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G++G R ++G +S G + ++ SLDT GWFA D + VG +LL R P Q ++
Sbjct: 145 GLIGLRTTHGRISLDGTMKLAPSLDTFGWFADDIETYETVGKLLL------GRDPHQHVL 198
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN-----LGEYFDSKVPSLKGFHKTN 290
DR + + + L R L G F + F +
Sbjct: 199 ------------DR--PLALDWLDGLVARPALAEYAGMKGLAGAVFGAPATPAIRFSSSP 244
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
EL R +Q E H EWI S + L P + G + + + K R R
Sbjct: 245 DELYWCFRRLQAKEAWAVHGEWITSGERDLGPGVEERFGFGRAVDDKTAQAEKVRRLTFR 304
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
+S+LL DG LV PT P P + + Y+ RA LL +A +SG Q+T+P+G
Sbjct: 305 GELSALLGKDGFLVLPTVPGPAPYVDSTPEQFQAYRERALQLLCLAGLSGFPQITLPIGS 364
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQN 436
P +S + G D R LLD +
Sbjct: 365 VAGAPFGLSLLGPSGSDIALIRLGRKLLDAARK 397
>gi|13472622|ref|NP_104189.1| amidase [Mesorhizobium loti MAFF303099]
gi|14023368|dbj|BAB49975.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Mesorhizobium loti
MAFF303099]
Length = 398
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 190/397 (47%), Gaps = 42/397 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL AV D++D+ GY TG G+ +AASRT+ V T+++ GA +GKT DE
Sbjct: 26 PLAGLRLAVKDIYDVAGYRTGCGNSRKFTESNAASRTAPAVQTILDAGARFVGKTQTDEL 85
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+++ G N H+ P NPAAP ++ GGSSSG+A AVA L D + G DT G +R P++FCG
Sbjct: 86 AFALFGQNAHFPFPVNPAAPDRVTGGSSSGSASAVAGRLADIATGSDTGGSIRAPASFCG 145
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G R ++G ++ G + ++ S DT GWFA D + VG +LL R P Q +
Sbjct: 146 LIGLRTTHGRIALDGTMKLAPSFDTFGWFADDIETYETVGKLLL------GRDPHQHSL- 198
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEY----------FDSKVPSLKGF 286
DR + + +++ LGEY F S F
Sbjct: 199 -----------DRPISLTWLD-------EMVARPALGEYAAMKALAGAVFGMPATSTTRF 240
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
+ EL R +Q E H EWI S + L P + G + + + R
Sbjct: 241 SSSPDELYWCFRRLQAREAWGVHGEWITSGERDLGPGVEERFGFGRAVDDRTAQAENVRR 300
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
R +S+LL DG LV PT P P + + Y+ RA LL +A +SG Q+T+
Sbjct: 301 LTFRGELSALLGQDGFLVLPTVPGPAPYVDSTPEQFQAYRERALHLLCLAGLSGFPQITL 360
Query: 407 PLGYYDKCPTSVSFIARHGGD-------RFLLDTVQN 436
P+G P +S + G D R LLD Q
Sbjct: 361 PIGSVAGAPFGLSLLGPSGSDIALIRLGRKLLDAAQR 397
>gi|390449988|ref|ZP_10235586.1| amidase [Nitratireductor aquibiodomus RA22]
gi|389663123|gb|EIM74660.1| amidase [Nitratireductor aquibiodomus RA22]
Length = 395
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 190/387 (49%), Gaps = 17/387 (4%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P P PL GL+ V D+FD+ GY TG G+P A HS A T+ + +L++ GA
Sbjct: 15 PDAPPPASGEGPLAGLTLGVKDIFDVAGYPTGGGNPRRAEIHSRAPDTTPPIQSLLDAGA 74
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
IGKT DE +S+ G N HY P N AAP + GGSSSG+A AVA L D + G DT
Sbjct: 75 RFIGKTQTDELTFSMIGQNAHYPAPVNRAAPQRFTGGSSSGSAAAVAGGLADIAAGSDTN 134
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPF 224
G +R P+++CG++G R ++G + G +P++ S DT GWFARD VG VLL P+
Sbjct: 135 GSIRAPASYCGLIGLRTTHGRIPLDGAMPLAPSFDTFGWFARDAATYARVGEVLLGNDPY 194
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
DD ++IP + + + ++G + + +FD + +
Sbjct: 195 -----------DDDLARPVRIPEFEAL-LFGEKERAVYGTML---STVVHHFDREA-AFL 238
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS 344
+ +L R+IQ +E H ++I S KP L P + IS + ++
Sbjct: 239 ALPGSPEQLFECFRIIQTFEAWEVHGDFIRSAKPELGPGVRERFEFGSRISAATVAGARA 298
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQV 404
R + ++L D +LV PT P + + Y+ A L +IA + G ++
Sbjct: 299 ERRRFQQDFAALFDHDMVLVMPTQPTAAPLKSATQEELDRYRGLALKLTAIAGLLGWPEI 358
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLL 431
T+PLG P +S + G DR L+
Sbjct: 359 TIPLGQVHGAPFGISLLGPAGSDRQLI 385
>gi|239813857|ref|YP_002942767.1| amidase [Variovorax paradoxus S110]
gi|239800434|gb|ACS17501.1| Amidase [Variovorax paradoxus S110]
Length = 393
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 192/392 (48%), Gaps = 15/392 (3%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P+P PL L FA DLFD+ GY TG G P +RT+ V L++ GA
Sbjct: 14 PDAPVPHAPTGPLADLRFAAKDLFDVAGYPTGGGSPIVLAMSGIKTRTAPTVQKLLDAGA 73
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
GKTV DE A+S+NG N H+ P N AA ++ GGSSSG+A AV++ L DF+LG DT
Sbjct: 74 RFAGKTVTDELAFSMNGNNAHFGAPINGAAKDRITGGSSSGSASAVSSGLCDFALGTDTG 133
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P+ CG+ G RP++G VS G + ++ SLDT GWFARD V VLL A
Sbjct: 134 GSVRAPANHCGLYGLRPTHGRVSLEGALDLAPSLDTCGWFARDIGTFARVADVLLDADTA 193
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
A + +++ +D + L A + +++ G L + FD+
Sbjct: 194 ALPARVRLLRPEDVWSLAVPAAADALADAAARAQRVLGDAAGIEVAL-DSFDA------- 245
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+ R +Q +E IE P L P ++ +++ I ++
Sbjct: 246 -------MYWNFRYVQSHEAWLTDGPLIERYAPPLGPGVAERFAWSRGVTDAQIAAGRAF 298
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
R RS ++ LL DG+L+ PT P E EDY+NRA +L IA ++G Q++
Sbjct: 299 RTSFRSHLAKLLGSDGVLLMPTMPDIAPLRSEGEAGLEDYRNRAIRMLCIAGLAGFPQLS 358
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+PL P +S + G DR L+ + +
Sbjct: 359 MPLAQRHGAPLGISLLGPAGSDRSLIGLAERI 390
>gi|337266483|ref|YP_004610538.1| Amidase [Mesorhizobium opportunistum WSM2075]
gi|336026793|gb|AEH86444.1| Amidase [Mesorhizobium opportunistum WSM2075]
Length = 398
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 189/387 (48%), Gaps = 22/387 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL AV D++D+ GY +G G+P AASRT+ V +++ GA +GKT DE
Sbjct: 26 PLAGLRLAVKDIYDVAGYRSGCGNPRKFADSPAASRTAPAVQVILDAGARFVGKTQTDEL 85
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+++ G N H+ P NPAAP ++ GGSSSG+A AVA L D + G DT G +R P++FCG
Sbjct: 86 AFALFGQNAHFSFPVNPAAPDRVTGGSSSGSAAAVAGKLADIATGSDTGGSIRAPASFCG 145
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G R ++G +S G + ++ S DT GWFA D + VG +LL RQ+ +
Sbjct: 146 LIGLRTTHGRISLDGTMKLAPSFDTFGWFADDIETYETVGKLLLGRDQHHHHLDRQLALG 205
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
EL+ PA + + +FG P++ F + EL
Sbjct: 206 -WLDELVARPALAEYAGMKRLASAVFGAPA-------------TPTMP-FSSSPDELYWC 250
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
R +Q E H EWI S + L P + G + E + + R R + +L
Sbjct: 251 FRRLQAKEAWGVHGEWITSGERDLGPGVEERFGFGRAVDERTAQAEEVRRLTFRGELGAL 310
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L DG LV PT P P + + Y+ RA LL +A +SG Q+T+P+G P
Sbjct: 311 LGKDGFLVLPTVPGPAPYVDSTPEQFQAYRERALHLLCLAGLSGFPQITLPIGSVAGAPF 370
Query: 417 SVSFIARHGGD-------RFLLDTVQN 436
+S + G D R LLD Q
Sbjct: 371 GLSLLGPSGSDIALIRLGRKLLDAAQK 397
>gi|149204307|ref|ZP_01881274.1| Amidase [Roseovarius sp. TM1035]
gi|149142192|gb|EDM30239.1| Amidase [Roseovarius sp. TM1035]
Length = 364
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 194/388 (50%), Gaps = 27/388 (6%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
+ V D FDI G+VTG G PEW + H AA+ TS VV L++ GA IGKT +DE AYS+
Sbjct: 1 MRVGVKDGFDIAGHVTGAGCPEWGQFHGAATATSPVVQVLLDSGAEIIGKTQMDELAYSL 60
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N Y TP NPAA ++PGGSSSG+A +VAA LVD LG DT G VR+P++FCG+ G+
Sbjct: 61 MGVNARYGTPLNPAAQDRVPGGSSSGSAASVAAGLVDIGLGSDTGGSVRLPASFCGVYGW 120
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RP++G +S ++P++ S DT G+F RD + V V P A P + + D +
Sbjct: 121 RPTHGLMSGDSLVPLAPSYDTPGFFTRDLMTMATVASVFQDAP--ATVKPIKFWLPSDLW 178
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM--- 297
L A+ V ++ V+ H + D +P +G+L + +
Sbjct: 179 SL----AESGVSAALRDA-----LPVVDHRS-----DPILP--------DGDLSDWLGAF 216
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
R+ Q YE WI +P P I I+ ++ R +R + +
Sbjct: 217 RIHQGYEIWQTLGPWITQNQPDFGPGIRERFETASRITRQDFDSAVEKRCAIREHLEKAI 276
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
ILV PT+ P ++ E ++N A ++L +A +G Q+++PL Y P
Sbjct: 277 DPATILVFPTSPGAAPLRSTQQSDLELFRNAALTMLCVAGHAGLPQISIPLATYTGAPVG 336
Query: 418 VSFIARHGGDRFLLDTVQNMYASLQEQA 445
+S G D L+ T Q Q++A
Sbjct: 337 LSLAGAKGADHLLIKTAQIFEPKPQDRA 364
>gi|404319786|ref|ZP_10967719.1| amidase [Ochrobactrum anthropi CTS-325]
Length = 395
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 190/389 (48%), Gaps = 31/389 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G AV D++D+ G TG G+P+ A R++ VV L+ GA +GK DE
Sbjct: 25 PLKGERLAVKDIYDVAGMATGCGNPQIEAESPRAERSAPVVKKLLAAGAEFVGKAQTDEL 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+ G N H+ P NPAAP ++ GGSSSG+A AVA L D +LG DT G +R P++FCG
Sbjct: 85 AFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRAPASFCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G R ++G + I+P++ SLDT+GWFARD + VG +LL
Sbjct: 145 LVGLRTTHGRIPLEDIMPLAPSLDTIGWFARDIDLYDRVGSILL---------------G 189
Query: 237 DDCFELLKIPADRVVQVVIKST--EKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN---- 290
+D E R+ Q++ + L G+Q + + F P G +
Sbjct: 190 NDAREF------RLTQLLYMPVLEQLLLGQQ--ETDAYRTMFAQVRPHFSGLKAASQPTL 241
Query: 291 --GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
EL V R IQ E H WI S L P ++ EI+ ++ + + R +
Sbjct: 242 SIDELYLVFRHIQGAEAWATHGSWISSGDRKLGPGVADRFAFGAEIAADLVASQRMRRAQ 301
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+ ++ +D +L PT P + Y+ +A LL ++ +SG Q+T+PL
Sbjct: 302 FTQELEQIVGNDAVLALPTVPGAAPLAKEPFETLQAYREQALRLLCLSVLSGLPQITLPL 361
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
G P +SFI G DR L+ +N+
Sbjct: 362 GQVQGAPFGISFIGPRGSDRALIGLAKNI 390
>gi|410617704|ref|ZP_11328669.1| amidase [Glaciecola polaris LMG 21857]
gi|410162835|dbj|GAC32807.1| amidase [Glaciecola polaris LMG 21857]
Length = 404
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 181/381 (47%), Gaps = 25/381 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+G++ AV DLF I+G T G+P+W +H A TS VV L++ GA +GKT+ DE
Sbjct: 32 PLSGMTLAVKDLFHIKGLPTTAGNPDWLASHPIAEHTSPVVDKLLQQGAALVGKTITDEL 91
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+NG N HY TP N ++P ++PGGSSSG+AVAV LG DT G +RVP+++ G
Sbjct: 92 AYSLNGQNIHYGTPFNVSSPERLPGGSSSGSAVAVREGSAVIGLGTDTGGSIRVPASYNG 151
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP++G +S ++ ++ S DTVGW RD L V VL F+ Q
Sbjct: 152 LFGLRPTHGRISCEHMVGLAPSFDTVGWMTRDLDSLCAVADVLFTDSFSNGLPNIQ---- 207
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLK---HENLGEYFDSKVPSLKGFHKT-NGE 292
LK P + ++ E QVL H + E P G T +
Sbjct: 208 ------LKKPRISLSPELMAQCEY---SQVLDAAYHAMVNE----PCPLTSGLSDTLLSQ 254
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
R++Q YE H +WI +P DI I+ + + +
Sbjct: 255 ASETFRILQGYEIWQTHGQWITEHQPKFAVDIQQRFTWCATINLRQYQQALVQQQIFIAH 314
Query: 353 ISSLLKDDGILVTPTTAYPPPKLG--GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
I+ L ++ PTT P P L G E+ + Y+N L IA + G Q+ VPL
Sbjct: 315 INDLFTQCDMIFLPTTPGPAPFLNTPGDELTT--YRNTLMRLTCIAGLCGLPQLHVPLAI 372
Query: 411 YDKCPTSVSFIARHGGDRFLL 431
P S I + D+ L+
Sbjct: 373 NPHAPMGFSLIGQKNHDKQLI 393
>gi|333893596|ref|YP_004467471.1| amidase [Alteromonas sp. SN2]
gi|332993614|gb|AEF03669.1| amidase [Alteromonas sp. SN2]
Length = 425
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 189/400 (47%), Gaps = 30/400 (7%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
H L G AV DLF IEG T G+P+W TH + +++ V L++ GAT GKT+ DE
Sbjct: 41 HALKGYGLAVKDLFHIEGLPTAAGNPDWLATHPVPTASNSTVEKLLDAGATFKGKTITDE 100
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
AYS++G NKHY NP AP+ +PGGSSSG+AVAV+A L D LG DT G +RVP+++
Sbjct: 101 LAYSLHGQNKHYPQLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPASYQ 160
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G+ G R ++ A+ ++ ++ S DTVGW RD L V HV L
Sbjct: 161 GLWGLRTTHNAIPCDNMVALAPSFDTVGWMTRDLDTLEKVSHVCL--------------- 205
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKH--------ENLGEYFDSKVPSLKGFH 287
AD E L AD I+ Q KH E L E DS
Sbjct: 206 ADASQETLSNTADDATDTTIRIGTVQHLLQSAKHGVLTTKWLETLNEKADSDNAGFTITP 265
Query: 288 KTNGELK-------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIE 340
T EL R++Q E H +WI P + DI + ISE ++
Sbjct: 266 ITEHELDLSALNTAATFRVLQGAEIWQQHGQWITDTSPDIAHDIMLRLNWCETISEQEVD 325
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG 400
+ K + + I+SL + +L+ PTT P+ E + +N +L SIA ++
Sbjct: 326 DAKKQQVAFQEYINSLFETVDVLLIPTTPGIAPRCDADEETLANDRNALLALTSIAGLAE 385
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
Q+ +PL P +S + + G D L+ + + A+
Sbjct: 386 LPQIHMPLFTLQNAPCGLSLVGKKGSDLALIKLAKALTAN 425
>gi|225685963|ref|YP_002733935.1| amidase [Brucella melitensis ATCC 23457]
gi|256262912|ref|ZP_05465444.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|265993439|ref|ZP_06105996.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|384212637|ref|YP_005601720.1| amidase [Brucella melitensis M5-90]
gi|384409737|ref|YP_005598357.1| amidase [Brucella melitensis M28]
gi|384446267|ref|YP_005660485.1| amidase [Brucella melitensis NI]
gi|225642068|gb|ACO01981.1| amidase [Brucella melitensis ATCC 23457]
gi|262764309|gb|EEZ10341.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|263092750|gb|EEZ16959.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|326410284|gb|ADZ67348.1| amidase [Brucella melitensis M28]
gi|326553577|gb|ADZ88216.1| amidase [Brucella melitensis M5-90]
gi|349744264|gb|AEQ09806.1| amidase [Brucella melitensis NI]
Length = 401
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 205/418 (49%), Gaps = 42/418 (10%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPLG-------YYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PLG YD P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMYD-APFGISFIGPRGSDRTLIALAQTI 396
>gi|261855471|ref|YP_003262754.1| amidase [Halothiobacillus neapolitanus c2]
gi|261835940|gb|ACX95707.1| Amidase [Halothiobacillus neapolitanus c2]
Length = 391
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 177/377 (46%), Gaps = 23/377 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL V DLFDI G T G+P+W TH+ T+ V L+ GA + KT+ DE A
Sbjct: 23 LCGLRVGVKDLFDIAGIPTSAGNPDWLATHAVPEHTAPAVLQLMHAGAHIVAKTLTDELA 82
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+NG N HY TP N A+P ++PGGSSSG+A VA L D LG DT G +RVPS++ G+
Sbjct: 83 YSLNGINTHYGTPINAASPERLPGGSSSGSAAMVAHGLADIGLGTDTGGSIRVPSSYNGL 142
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++G +S ++ ++ S DTVGW RD L V VLL P Q I
Sbjct: 143 FGLRPTHGVISVEHMVGLAPSFDTVGWMTRDLGTLADVADVLL---------PEQQPIEL 193
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS--KVPSLKGFHKTNGELKN 295
+LK D + ++++ L G F+S +V + + +
Sbjct: 194 KNLCILKPQIDCLEDWDLRASAWLATN--------GPLFESIHEVVVPRSLLQLASQ--- 242
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R++Q E + H W+ +P DI + I+ IE R E+ +S
Sbjct: 243 TFRILQGAEIWHTHGAWVSEARPRFAADIRERMNWCQSITSVQIEQAARDRIEITQILSH 302
Query: 356 LLKDDGIL-VTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
L + L + PTT P L DY+ L ++A +S Q+ +P+
Sbjct: 303 WLDGEHTLAILPTTPGAAPLLTESAECLADYRVALMGLTALAGLSSRPQLHLPVLSDHGA 362
Query: 415 PTSVSFIARHGGDRFLL 431
P +S I DR L+
Sbjct: 363 PWGLSLIGHRNTDRSLI 379
>gi|359433203|ref|ZP_09223544.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20652]
gi|357920164|dbj|GAA59793.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20652]
Length = 406
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 194/384 (50%), Gaps = 22/384 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
AV D+F I+ + G+P W +TH A +T++ VS L++ G G T DE AYS+ G
Sbjct: 38 LAVKDVFAIKDHKNSAGNPHWFKTHPPAQKTASSVSKLMDAGCIFTGYTHTDELAYSLEG 97
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY NP GGSS G+A AVAA+L D LG DT G +R+P+++CG+ G RP
Sbjct: 98 NNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGLYGIRP 157
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+ + G+IP++ DT+GW ++ ++L VG+VL LP A + ++I + FEL
Sbjct: 158 SHNVIEKDGLIPLAPPFDTIGWLTQNAELLSDVGNVL--LPNQAINNVNTLVICEPLFEL 215
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 302
+ ++ +++ T+ F KH E +S + + EL + R++Q
Sbjct: 216 VDSALQAPLKQLLEKTKPNF-----KHHKEFELPNSSLLN---------ELADSFRVLQG 261
Query: 303 YEFKNNHNEWIE--SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
H +W++ P P I+A L +++ + ++ + ++ I+ L +
Sbjct: 262 RAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQEALKVQTQWQTLIAKNLNTN 321
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKCPTSVS 419
L PTT PKLG + + + +L +IA SG QV +PL + P S
Sbjct: 322 SCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGFSGSAQVHLPLADLANDHPYGFS 378
Query: 420 FIARHGGDRFLLDTVQNMYASLQE 443
+ HG D+ LL V+++ A ++
Sbjct: 379 LMMSHGNDKSLLACVKHLAAHFKQ 402
>gi|53804699|ref|YP_113430.1| amidase [Methylococcus capsulatus str. Bath]
gi|53758460|gb|AAU92751.1| amidase family protein [Methylococcus capsulatus str. Bath]
Length = 341
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 181/354 (51%), Gaps = 22/354 (6%)
Query: 97 VSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLV 156
V ++ GA C+GKT DE A+ + G N Y TP NPAAP ++PGGSSSG+AVAVAA V
Sbjct: 3 VEQCLQAGAVCLGKTCADELAFGLTGENAFYGTPLNPAAPDRVPGGSSSGSAVAVAAGEV 62
Query: 157 DFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVG 216
DF+LG DT G +R+P++ CGI G RPS+G VS G+ P++ DTVG FAR+ + L+ V
Sbjct: 63 DFALGTDTAGSIRLPASNCGIWGMRPSHGGVSVAGVNPLAPGFDTVGAFARNGETLQRVM 122
Query: 217 HVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF 276
+LL + + S R ++ + F+ + PA R K FG VLK L F
Sbjct: 123 SLLLNVDPLSTVSGRLWLLQEG-FDAAE-PAVR----------KAFG-PVLKR--LAGSF 167
Query: 277 DSKVPSLKGFHKTNG-----ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
S+ SL+ G + V + IQ E + WIES +PAL
Sbjct: 168 PSREISLRSIDGEAGVSGMDNWRQVFQPIQWAEIWSTLGTWIESARPALGERTRRNFELA 227
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG--GKEMLSEDYQNRA 389
+ ++ + R R+A++ +L + ++ PT P P G G + DY R
Sbjct: 228 KGLDRRLLPAALARRERYRAALARVLGPEDVICFPTVHAPAPLKGSLGLDRTQGDYFPRV 287
Query: 390 FSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
+ ++IA + Q+++P + P +S +A G D FL+ Q + A L +
Sbjct: 288 LARMAIAGICRLPQISLPAVEVEGAPVGLSLLAAEGNDAFLMAFAQGVAAVLDD 341
>gi|423119157|ref|ZP_17106841.1| hypothetical protein HMPREF9690_01163 [Klebsiella oxytoca 10-5246]
gi|376399803|gb|EHT12417.1| hypothetical protein HMPREF9690_01163 [Klebsiella oxytoca 10-5246]
Length = 394
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 195/391 (49%), Gaps = 25/391 (6%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
PPQP+P PL+G++FAV DLFD+ GY TG G+P RT+ VV L++ GA
Sbjct: 12 PPQPVPHALSGPLSGMTFAVKDLFDVAGYPTGGGNPHLLALSGIKRRTAPVVQRLLDNGA 71
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
IGKT E AYS++G N HY TP N AAP+ +PGGSSSG+A AV+ + DF+LG DT
Sbjct: 72 RFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNGVCDFALGTDTG 131
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P+++CG+ G RP++G +S G P+ ++DT G+FA+ P++ R V LL
Sbjct: 132 GSVRTPASYCGLFGLRPTHGRISLDGCQPLCATMDTCGFFAQTPEVFRAVADCLLD---- 187
Query: 226 AQRSPRQIIIADDC----FELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP 281
+ P +A C F L + + + + V + E++FG ++ +P
Sbjct: 188 -AKPPAIAGVALACHDALFSCLPLRSQQALLPVRQRLERVFGTFT--------PLNASLP 238
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
+ E+ R IQ +E E IE L PD+ ++ E
Sbjct: 239 DID-------EIYLAFRQIQGFEAWQAQGETIERYGLQLGPDVRERFLWGKAVTPAQYEA 291
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC 401
R +LL D ILV PT P L + E + + LL I+ ++
Sbjct: 292 ACQRREHFTRWWDALLG-DAILVLPTVPDGAPLLTAQAEEIETTRRLSHDLLLISVMTRR 350
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
QVT+P+ P +SF+ G DR L++
Sbjct: 351 PQVTLPVAQAGGLPLGISFLGPCGSDRLLVE 381
>gi|423127971|ref|ZP_17115650.1| hypothetical protein HMPREF9694_04662 [Klebsiella oxytoca 10-5250]
gi|376395010|gb|EHT07660.1| hypothetical protein HMPREF9694_04662 [Klebsiella oxytoca 10-5250]
Length = 394
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 199/406 (49%), Gaps = 28/406 (6%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
++ D AF+ PP P+ PL+GL+FAV DLFD+ GY TG G+P
Sbjct: 1 MQDDLRAFMPY-----PPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGI 55
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
+RT+ VV TL++ GA IGKT E AYS++G N HY TP N AAP+ +PGGSSSG+A
Sbjct: 56 KNRTAPVVQTLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSAS 115
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AV+ ++ DF+LG DT G VR P+++CG+ G RP++G +S G P+ ++DT G+FAR P
Sbjct: 116 AVSNEVCDFALGTDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSP 175
Query: 210 KILRHVGHVLLQLPFAAQR---SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV 266
++ V L FA +R S ++ D F L + + + +Q V + + FG
Sbjct: 176 EVFSAVAACL----FADERADLSGVRLACHDGLFSRLPLRSQQALQPVRQRLARFFG--- 228
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
V L ++ R IQ YE E IE L PD+
Sbjct: 229 ------------AVTPLTAPLPDVDDIYLAFRQIQGYEAWQAQGETIERYGLQLGPDVRE 276
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
++ + R + + L D +LV PT P L + E +
Sbjct: 277 RFFWGKAVTRAQFDAACQQRERFAAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEEIEAVR 335
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
+ LL I+ ++ QVT+P+ P +SF+ G DR L++
Sbjct: 336 RLSHDLLLISVMTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVE 381
>gi|119469834|ref|ZP_01612672.1| amidase [Alteromonadales bacterium TW-7]
gi|119446817|gb|EAW28089.1| amidase [Alteromonadales bacterium TW-7]
Length = 402
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 189/385 (49%), Gaps = 22/385 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
AV D+F ++ G+P W +TH A +T++ V+ L++ G G T DE AYS+ G
Sbjct: 34 LAVKDVFAVKKQKNSAGNPCWFKTHPPAQQTASSVNNLMDAGCIFKGFTHTDELAYSLEG 93
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY NP GGSS G+A AVA +L D LG DT G +R+P+++CG+ G RP
Sbjct: 94 NNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGLFGIRP 153
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+ + G+IP++ DT+GW + ++L VG+VL LP A S ++I + FEL
Sbjct: 154 SHNVIEKDGLIPLAPHFDTIGWLTQSAELLEKVGNVL--LPNQAINSVNTLVICEPLFEL 211
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 302
+ ++ ++K T+ F KH + ++P++ EL + R++Q
Sbjct: 212 VSPALQAPLKQLLKKTKPYF-----KHHK-----EFELPNISLL----SELADSFRILQG 257
Query: 303 YEFKNNHNEWIESVK--PALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
H +W++ + P P I+A L +++ + +++ + ++ I+ L
Sbjct: 258 RAIAKAHKDWLQLPEHPPQFAPAIAARFKMALALTDQEEKEALNVQTQWQTLIAKNLNST 317
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKCPTSVS 419
L PTT PKLG + + + +L +IA +S QV +PL P S
Sbjct: 318 SCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSRSAQVHLPLANLASGHPYGFS 374
Query: 420 FIARHGGDRFLLDTVQNMYASLQEQ 444
+ H D+ LL + A +++
Sbjct: 375 LMMSHNNDKSLLACATQLAAYFKQE 399
>gi|339325639|ref|YP_004685332.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
gi|338165796|gb|AEI76851.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
Length = 396
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 192/398 (48%), Gaps = 16/398 (4%)
Query: 43 LLPPPQ-PLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLV 101
+P PQ +P A PL GLSFAV DLFD+ GY TG G+P + T+ V L+
Sbjct: 11 FMPYPQVAVPHAASGPLQGLSFAVKDLFDVAGYPTGGGNPHVLARSGIKAATAPAVQRLL 70
Query: 102 EGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLG 161
+ GA +GKT DE A+S+NG N HY P N AAP ++ GGSSSG+A AV+ L DF+LG
Sbjct: 71 DAGAAFVGKTHTDELAFSMNGQNAHYGRPVNGAAPDRITGGSSSGSASAVSNGLCDFALG 130
Query: 162 IDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ 221
DT G VR P++ CG+ G RP++G +S +P+S SLDT G+FA D V VL
Sbjct: 131 SDTGGSVRAPASHCGLFGIRPTHGRISLERCLPLSESLDTCGFFASDIGTFARVAEVLFG 190
Query: 222 LPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP 281
A + ++++A D F A + + E GR
Sbjct: 191 ADPAPLPAAPRLLVATDLFGQPTPEARGALAPAVARIEAALGRAA--------------- 235
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
+ + EL R +Q +E ++ E IE L D++A ++ + +
Sbjct: 236 PVTVADRPLSELWWAFRYVQGWEAWHSDGELIEQHGLELGADVAARFAFSKAVTRSQFDE 295
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC 401
++R + + + LL DG+LV PT P E Y+N A L + +SG
Sbjct: 296 ASAVRRDFTAHVGRLLGQDGVLVLPTMPDIAPLRAEPVESLETYRNLASQTLCLTPLSGF 355
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
Q+ +PL D P +S + G DR L+ + + A
Sbjct: 356 PQLNLPLARRDGAPLGISLLGPAGSDRSLVALAERIMA 393
>gi|260757078|ref|ZP_05869426.1| amidase [Brucella abortus bv. 6 str. 870]
gi|260882888|ref|ZP_05894502.1| amidase [Brucella abortus bv. 9 str. C68]
gi|297249999|ref|ZP_06933700.1| amidase [Brucella abortus bv. 5 str. B3196]
gi|260677186|gb|EEX64007.1| amidase [Brucella abortus bv. 6 str. 870]
gi|260872416|gb|EEX79485.1| amidase [Brucella abortus bv. 9 str. C68]
gi|297173868|gb|EFH33232.1| amidase [Brucella abortus bv. 5 str. B3196]
Length = 401
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 203/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGTDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|85707490|ref|ZP_01038568.1| amidase [Roseovarius sp. 217]
gi|85668000|gb|EAQ22883.1| amidase [Roseovarius sp. 217]
Length = 364
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 193/379 (50%), Gaps = 29/379 (7%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
+ V D FDI G VTG G PEWA+ H A++TS VV L++ GA IGKT +DE AYS+
Sbjct: 1 MRVGVKDGFDIAGQVTGAGCPEWAKFHGVATKTSPVVRALLDAGAEIIGKTQMDELAYSL 60
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N Y TP NPAAP ++PGGSSSG+A VAA LV+ LG DT G +R+P++FCG+ G+
Sbjct: 61 MGVNARYGTPVNPAAPDRVPGGSSSGSAAGVAAGLVEIGLGSDTGGSIRLPASFCGLFGW 120
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI--IIADD 238
RP++G +S ++P++ S DT G+F RD + V V +AQ S Q+ + D
Sbjct: 121 RPTHGLISGDKLVPLAPSYDTPGFFTRDLGTMAAVASVFQ----SAQTSAEQVNFWLPSD 176
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD--SKVPSLKGFHKTNGELKNV 296
+ L A+ V +++ V++H + D S+ L G+ + V
Sbjct: 177 LWSL----AEEGVSAALRAALP-----VVEHRS-----DPISRGDDLAGWLE-------V 215
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
R+ Q YE WI +P P I I+ + R +R+ +
Sbjct: 216 FRIHQGYEIWQTLGPWIIQNQPNFGPGIRERFETASRITRQDFDLAVERRYNIRAHLEKA 275
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
+ ++V PT+ P ++ E +N A ++L +A +G Q+T+PL Y P
Sbjct: 276 IDSKTVIVFPTSPGAAPLRSTQQGDLEVLRNAALTMLCVAGHAGLPQITIPLTTYASAPV 335
Query: 417 SVSFIARHGGDRFLLDTVQ 435
+S G D LL+T Q
Sbjct: 336 GLSLAGARGTDHLLLETAQ 354
>gi|23499864|ref|NP_699304.1| amidase [Brucella suis 1330]
gi|376278087|ref|YP_005108120.1| amidase [Brucella suis VBI22]
gi|384222649|ref|YP_005613814.1| amidase [Brucella suis 1330]
gi|23463436|gb|AAN33309.1| amidase [Brucella suis 1330]
gi|343384097|gb|AEM19588.1| amidase [Brucella suis 1330]
gi|358259525|gb|AEU07258.1| amidase [Brucella suis VBI22]
Length = 401
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 204/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK +DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQMDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|261216740|ref|ZP_05931021.1| amidase [Brucella ceti M13/05/1]
gi|261319607|ref|ZP_05958804.1| amidase [Brucella ceti M644/93/1]
gi|260921829|gb|EEX88397.1| amidase [Brucella ceti M13/05/1]
gi|261292297|gb|EEX95793.1| amidase [Brucella ceti M644/93/1]
Length = 401
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 203/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPSGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|256014891|ref|YP_003104900.1| amidase [Brucella microti CCM 4915]
gi|261313788|ref|ZP_05952985.1| amidase [Brucella pinnipedialis M163/99/10]
gi|265987024|ref|ZP_06099581.1| amidase [Brucella pinnipedialis M292/94/1]
gi|294853125|ref|ZP_06793797.1| amidase [Brucella sp. NVSL 07-0026]
gi|255997551|gb|ACU49238.1| amidase [Brucella microti CCM 4915]
gi|261302814|gb|EEY06311.1| amidase [Brucella pinnipedialis M163/99/10]
gi|264659221|gb|EEZ29482.1| amidase [Brucella pinnipedialis M292/94/1]
gi|294818780|gb|EFG35780.1| amidase [Brucella sp. NVSL 07-0026]
Length = 401
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 203/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|148558743|ref|YP_001257168.1| amidase [Brucella ovis ATCC 25840]
gi|148370028|gb|ABQ62900.1| amidase [Brucella ovis ATCC 25840]
Length = 401
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 203/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFSYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|110635048|ref|YP_675256.1| amidase [Chelativorans sp. BNC1]
gi|110286032|gb|ABG64091.1| Amidase [Chelativorans sp. BNC1]
Length = 395
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 199/401 (49%), Gaps = 30/401 (7%)
Query: 47 PQPLPPKAPHPL-TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
PQ P +P L GLSF V D++D+ GY TG G+P+ S +S + L++ GA
Sbjct: 15 PQTAVPSSPTGLLRGLSFGVKDIYDVAGYPTGCGNPQKEAERGPVSHSSPAIQALLDAGA 74
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
GKT DE A+S+ G N H+ P NP AP ++ GGSSSG+A AVA L DF++G DT
Sbjct: 75 AFAGKTQTDELAFSMMGMNAHFPPPVNPRAPERVTGGSSSGSAAAVAGGLADFAIGSDTN 134
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF- 224
G VR+P++FCG++G R ++G +S G +P++ S DT GWFARD + VG VLL F
Sbjct: 135 GSVRIPASFCGLIGLRTTHGRISMEGAMPLAPSFDTFGWFARDARTYEAVGEVLLGEDFH 194
Query: 225 -AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGR--QVLKHENLGEYFDSKVP 281
RSP +I FE +LFG+ E LG D
Sbjct: 195 GGTLRSPVRI----SEFE-----------------ARLFGQAESAAYGEMLGRVLDHFGK 233
Query: 282 SLKGFHKTNGELKNV---MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV 338
S G+ GE++++ R IQ +E + ++ L P + IS+
Sbjct: 234 S-AGYVALPGEIEDLYECFRQIQAHEAWLSQAYFLSQQDRELGPGVKERFAYGRSISDET 292
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASV 398
EN + R E ++ ++L++ D ++V PT P E Y++R +L IA +
Sbjct: 293 AENARRRRREFQADFNALMRPDMVVVMPTQPSAAPLKIATLEEQESYRHRGLALTCIAGL 352
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
G Q+++PLG P +S + G DR L+ + A
Sbjct: 353 LGWPQISIPLGEVHGAPFGISLLGPAGSDRQLIRLASKILA 393
>gi|113867483|ref|YP_725972.1| amidase [Ralstonia eutropha H16]
gi|113526259|emb|CAJ92604.1| Amidase [Ralstonia eutropha H16]
Length = 396
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 192/398 (48%), Gaps = 16/398 (4%)
Query: 43 LLPPPQ-PLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLV 101
+P PQ +P A PL GLSFAV DLFD+ GY TG G+P + T+ V L+
Sbjct: 11 FMPYPQIAVPHAASGPLRGLSFAVKDLFDVAGYPTGGGNPHVLARSGIKAATAPAVQRLL 70
Query: 102 EGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLG 161
+ GA +GKT DE A+S+NG N HY P N AAP ++ GGSSSG+A AV+ L DF+LG
Sbjct: 71 DAGAAFVGKTHTDELAFSMNGQNAHYGRPVNGAAPERITGGSSSGSASAVSNGLCDFALG 130
Query: 162 IDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ 221
DT G VR P++ CG+ G RP++G +S +P+S SLDT G+FARD V VL
Sbjct: 131 SDTGGSVRAPASHCGLFGIRPTHGRISLERCLPLSESLDTCGFFARDIGTFARVAEVLFG 190
Query: 222 LPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP 281
A + +++ A D F A + + E GR P
Sbjct: 191 ADPAPLPAAPRLLFATDLFAQPTPEARDALAPAVARIETALGR--------------AAP 236
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
+ + +L R +Q +E + E IE L D++A ++ + +
Sbjct: 237 ATVA-DRPLSDLWWAFRYVQGWEAWRSDGELIEQHGLELGADVAARFAFSKAVTRSQFDE 295
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC 401
++R + + + LL DG+LV PT P E Y+N A L + +SG
Sbjct: 296 ASAVRRDFTAHLGRLLGPDGVLVLPTMPDIAPLRAEPIESLETYRNLAAQTLCLTPLSGF 355
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
Q+ +PL D P +S + G DR L+ + + A
Sbjct: 356 PQLNLPLAGRDGAPLGISLLGPAGSDRSLVALAERIMA 393
>gi|449534003|ref|XP_004173959.1| PREDICTED: outer envelope protein 64, mitochondrial-like, partial
[Cucumis sativus]
Length = 175
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 118/159 (74%), Gaps = 6/159 (3%)
Query: 8 LWVLLGLGLAGILLM--TKKLKKNIK----QDFGAFIEKLQLLPPPQPLPPKAPHPLTGL 61
LW+L+G+G+AG++++ T++ +N K +DFGAFI++ +L P PQP PP A L GL
Sbjct: 17 LWILIGVGVAGVVILAETRRRGRNGKVLQGEDFGAFIQRFELRPFPQPSPPAARQSLAGL 76
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
+FAV D+FD++ YVTGFG+P+W RTH A +T +V+ L++ GA C+GKTV+DE + I
Sbjct: 77 TFAVKDVFDVKDYVTGFGNPDWKRTHDVAEKTDEMVTLLLKNGAACVGKTVMDELGFGIT 136
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSL 160
G NK Y TPTNP S +PGGSSSG+AVAVA +LVDF+L
Sbjct: 137 GENKQYGTPTNPKLSSFVPGGSSSGSAVAVAGELVDFAL 175
>gi|359449031|ref|ZP_09238535.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20480]
gi|358045168|dbj|GAA74784.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20480]
Length = 402
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 188/385 (48%), Gaps = 22/385 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
AV D+F ++ G+P W +TH A RT++ V+ L++ G G T DE AYS+ G
Sbjct: 34 LAVKDVFAVKKQKNSAGNPCWFKTHPLAQRTASSVNKLMDAGCIFKGFTHTDELAYSLEG 93
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY NP GGSS G+A AVA +L D LG DT G +R+P+++CG+ G RP
Sbjct: 94 NNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGLFGIRP 153
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+ + G+IP++ DT+GW + ++L VG+VLL A S ++I + FEL
Sbjct: 154 SHNLIEKDGLIPLAPPFDTIGWLTQSAELLEKVGNVLLS--NRAINSVNTLVICEPLFEL 211
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 302
+ ++ ++K T+ F H+N ++P++ EL + R++Q
Sbjct: 212 VSPALQAPLKQLLKKTKPFFKH----HKNF------ELPNISLL----SELADSFRILQG 257
Query: 303 YEFKNNHNEWIESVK--PALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
H +W++ + P P I+A L ++ + +++ + ++ I+ L
Sbjct: 258 RAIAKVHKDWLQLPEHPPQFAPAIAARFKMALALTAQEEKEALNVQTQWQTLIAKNLNST 317
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKCPTSVS 419
L PTT PKLG + + + +L +IA +S QV +PL + P S
Sbjct: 318 SCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSRSAQVHLPLANLANGHPYGFS 374
Query: 420 FIARHGGDRFLLDTVQNMYASLQEQ 444
+ H D+ LL + A +++
Sbjct: 375 LMMSHNNDKSLLACATQLAAYFKQE 399
>gi|237808703|ref|YP_002893143.1| amidase [Tolumonas auensis DSM 9187]
gi|237500964|gb|ACQ93557.1| Amidase [Tolumonas auensis DSM 9187]
Length = 400
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 187/397 (47%), Gaps = 35/397 (8%)
Query: 52 PKAPH--------PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEG 103
P PH PL+ L DL+ + GY TG G+P W TH A+ TS V+ L+
Sbjct: 11 PHGPHNFRVATEGPLSDLRLVYKDLYHVAGYPTGAGNPTWLNTHEPAAATSPVLLKLMNA 70
Query: 104 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGID 163
G IG+ DE AYS+NG N HY TP NPAAP ++PGGSSSG+AVAVA D LG D
Sbjct: 71 GMQIIGRVQTDELAYSLNGCNIHYGTPVNPAAPDRLPGGSSSGSAVAVARGDADVGLGTD 130
Query: 164 TVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QL 222
T G +RVP+ + G+ G RP++G +S ++P++ DT GW RD L VG L
Sbjct: 131 TGGSIRVPACYNGLFGIRPTHGRLSSEHMVPLAPRFDTPGWLCRDAATLERVGAQLFGAT 190
Query: 223 PFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS 282
P +R ++ A F+LL P D + ++ ++L HE +D
Sbjct: 191 PVKTERV--DLLWATSLFDLL--PED-LCTAIVPIKQQLAACVASLHE-----WDFAPAR 240
Query: 283 LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA--EIGEMLEISETVI- 339
L EL N R +Q E H+ W+ A DI+ + L + +
Sbjct: 241 LS-------ELNNTFRTLQGREVARTHSAWVSQHPDAFAADIAERFQWASQLTAEDEALA 293
Query: 340 -ENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASV 398
E C+ + E+ + + + LV PTT P + D++ + L ++A +
Sbjct: 294 EETCQQWKAEIIARLET-----ACLVIPTTPDLAPLRSASDADLADFRMKLLGLTALAGL 348
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
+G QV +PL P S I + G D LL V+
Sbjct: 349 AGLPQVHLPLVKVAGVPFGFSIIGKPGSDMQLLALVR 385
>gi|261318972|ref|ZP_05958169.1| amidase [Brucella pinnipedialis B2/94]
gi|340791861|ref|YP_004757325.1| amidase [Brucella pinnipedialis B2/94]
gi|261298195|gb|EEY01692.1| amidase [Brucella pinnipedialis B2/94]
gi|340560320|gb|AEK55557.1| amidase [Brucella pinnipedialis B2/94]
Length = 401
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 203/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFAILKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|17989479|ref|NP_542112.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260564256|ref|ZP_05834741.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|265989461|ref|ZP_06102018.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
gi|17985361|gb|AAL54376.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260151899|gb|EEW86992.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|263000130|gb|EEZ12820.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
Length = 401
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 204/418 (48%), Gaps = 42/418 (10%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFSQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPLG-------YYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PLG YD P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMYD-APFGISFIGPRGSDRTLIALAQTI 396
>gi|359452027|ref|ZP_09241390.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20495]
gi|358050908|dbj|GAA77639.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20495]
Length = 401
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 195/385 (50%), Gaps = 24/385 (6%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
AV D+F ++G G+P W +T A T++ V+ L+ G IG T DE AYS+ G
Sbjct: 33 LAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTVGCNFIGFTHTDELAYSLEG 92
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY NP GGSS G+A AVAA+L D LG DT G +R+P+++CG+ G RP
Sbjct: 93 NNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGLYGIRP 152
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+ + G+IP++ DT+GW + ++L VG+VL LP A + ++I + FEL
Sbjct: 153 SHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGNVL--LPNQAINNVDTLVICEPLFEL 210
Query: 243 LKIPADRVVQVVIKS-TEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQ 301
+ D V+QV +K EK+ + KH E +S + S EL + R++Q
Sbjct: 211 V----DPVLQVPLKQLLEKI--KPNFKHHKEFELPNSSLLS---------ELADSFRVLQ 255
Query: 302 RYEFKNNHNEWIE--SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKD 359
H +W++ P P I+A L +++ + ++ + ++ I+ L
Sbjct: 256 GRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQEALKVQTQWQTLIAKNLNT 315
Query: 360 DGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKCPTSV 418
+ L PTT PKLG + + + +L +IA +SG QV +PL + P
Sbjct: 316 NSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVHLPLADLANDHPYGF 372
Query: 419 SFIARHGGDRFLLDTVQNMYASLQE 443
S + HG D+ LL V+++ A ++
Sbjct: 373 SLMMSHGNDKSLLACVKHLAAHFKQ 397
>gi|265985701|ref|ZP_06098436.1| amidase [Brucella sp. 83/13]
gi|306837381|ref|ZP_07470260.1| amidase [Brucella sp. NF 2653]
gi|264664293|gb|EEZ34554.1| amidase [Brucella sp. 83/13]
gi|306407573|gb|EFM63773.1| amidase [Brucella sp. NF 2653]
Length = 401
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 205/420 (48%), Gaps = 46/420 (10%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A + K P +PL A PL G A+ D++DI G VTG G+P+ A ++
Sbjct: 7 FNALVAK-----PEKPLAHAASGPLAGERLAIKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEK-----LFG 263
VG VLL DD E LL +P + Q+++ E +F
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYCVMFA 224
Query: 264 RQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPD 323
+ NL + P+L + EL R IQ E NH WI S L P
Sbjct: 225 KVRPYFTNLKA---ASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPG 276
Query: 324 ISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSE 383
I+ E++ +++N ++ R +++ + +L PT P G +
Sbjct: 277 IADRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQ 336
Query: 384 DYQNRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
Y+ +A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 337 AYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRALIALAQTI 396
>gi|62317057|ref|YP_222910.1| amidase [Brucella abortus bv. 1 str. 9-941]
gi|83269050|ref|YP_418341.1| amidase [Brucella melitensis biovar Abortus 2308]
gi|189022322|ref|YP_001932063.1| amidase [Brucella abortus S19]
gi|237816618|ref|ZP_04595610.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus
str. 2308 A]
gi|260544293|ref|ZP_05820114.1| amidase [Brucella abortus NCTC 8038]
gi|260759552|ref|ZP_05871900.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260762797|ref|ZP_05875129.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|376270643|ref|YP_005113688.1| amidase [Brucella abortus A13334]
gi|423169073|ref|ZP_17155775.1| hypothetical protein M17_02762 [Brucella abortus bv. 1 str. NI435a]
gi|423171494|ref|ZP_17158168.1| hypothetical protein M19_02026 [Brucella abortus bv. 1 str. NI474]
gi|423174775|ref|ZP_17161445.1| hypothetical protein M1A_02172 [Brucella abortus bv. 1 str. NI486]
gi|423176653|ref|ZP_17163319.1| hypothetical protein M1E_00915 [Brucella abortus bv. 1 str. NI488]
gi|423180925|ref|ZP_17167565.1| hypothetical protein M1G_02024 [Brucella abortus bv. 1 str. NI010]
gi|423184056|ref|ZP_17170692.1| hypothetical protein M1I_02024 [Brucella abortus bv. 1 str. NI016]
gi|423187205|ref|ZP_17173818.1| hypothetical protein M1K_02022 [Brucella abortus bv. 1 str. NI021]
gi|423189626|ref|ZP_17176235.1| hypothetical protein M1M_01307 [Brucella abortus bv. 1 str. NI259]
gi|62197250|gb|AAX75549.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82939324|emb|CAJ12263.1| Amidase [Brucella melitensis biovar Abortus 2308]
gi|189020896|gb|ACD73617.1| Amidase [Brucella abortus S19]
gi|237787431|gb|EEP61647.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus
str. 2308 A]
gi|260097564|gb|EEW81438.1| amidase [Brucella abortus NCTC 8038]
gi|260669870|gb|EEX56810.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260673218|gb|EEX60039.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|363401815|gb|AEW18784.1| amidase [Brucella abortus A13334]
gi|374536916|gb|EHR08434.1| hypothetical protein M17_02762 [Brucella abortus bv. 1 str. NI435a]
gi|374537114|gb|EHR08628.1| hypothetical protein M19_02026 [Brucella abortus bv. 1 str. NI474]
gi|374538279|gb|EHR09788.1| hypothetical protein M1A_02172 [Brucella abortus bv. 1 str. NI486]
gi|374547455|gb|EHR18910.1| hypothetical protein M1G_02024 [Brucella abortus bv. 1 str. NI010]
gi|374547860|gb|EHR19313.1| hypothetical protein M1I_02024 [Brucella abortus bv. 1 str. NI016]
gi|374553230|gb|EHR24650.1| hypothetical protein M1E_00915 [Brucella abortus bv. 1 str. NI488]
gi|374556932|gb|EHR28332.1| hypothetical protein M1K_02022 [Brucella abortus bv. 1 str. NI021]
gi|374557180|gb|EHR28579.1| hypothetical protein M1M_01307 [Brucella abortus bv. 1 str. NI259]
Length = 401
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 202/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGTDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R Q E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQTQGAEAWENHGAWISSGNRQLGPRIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|359442241|ref|ZP_09232111.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20429]
gi|358035852|dbj|GAA68360.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20429]
Length = 400
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 187/384 (48%), Gaps = 22/384 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
AV D+F ++G G+P W +T A T++ V+ L+ G IG T DE AYS+ G
Sbjct: 32 LAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELAYSLEG 91
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY NP GGSS G+A AVAA+L D LG DT G +R+P+++CG+ G RP
Sbjct: 92 NNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGLYGIRP 151
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+ + G+IP++ S DT+GW + ++L VG+VL LP ++I + FEL
Sbjct: 152 SHNVIEKEGLIPLAPSFDTIGWLTQSAELLNDVGNVL--LPNQVINKVNTLVICEALFEL 209
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 302
+ + +++ T+ F + D K+P EL + R++Q
Sbjct: 210 VDPSLQAPLGKLLEKTKPYFNHHI----------DFKLPKSSLL----SELADTFRILQG 255
Query: 303 YEFKNNHNEWIE--SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
H +W+E P I+A L ++E + I++E ++ ++ L
Sbjct: 256 RAIAKTHRDWLELPDQLSHFAPAIAARFKMALALTEQEEQEALKIQHEWQTIVAKNLNKH 315
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKCPTSVS 419
L PTT PKLG + + + +L +IA +SG QV +PL + P S
Sbjct: 316 SCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVHLPLADLTNDHPYGFS 372
Query: 420 FIARHGGDRFLLDTVQNMYASLQE 443
+ HG D+ LL V+++ A ++
Sbjct: 373 LMMTHGNDKSLLACVKHLAAHFKQ 396
>gi|402844241|ref|ZP_10892608.1| amidase family protein [Klebsiella sp. OBRC7]
gi|402275145|gb|EJU24306.1| amidase family protein [Klebsiella sp. OBRC7]
Length = 394
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 192/395 (48%), Gaps = 33/395 (8%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
PP P+ PL+GL+FAV DLFD+ GY TG G+P +RT+ VV L++ GA
Sbjct: 12 PPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTAPVVQKLLDNGA 71
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
IGKT E AYS++G N HY TP N AAP+ +PGGSSSG+A AV+ ++ DF+LG DT
Sbjct: 72 RFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNEVCDFALGSDTG 131
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P+++CG+ G RP++G +S G P+ ++DT G+FAR P++ V L F
Sbjct: 132 GSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSTVAACL----FD 187
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLK--------HENLGEYFD 277
+R+ + V + S E LF R L+ + L +F
Sbjct: 188 DERA-------------------DITGVRLASHEGLFSRLPLRSQQALLPVRQRLARFF- 227
Query: 278 SKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET 337
+ L ++ R IQ YE E IE L PD+ ++
Sbjct: 228 GPLAQLDAPLPDADDIYLAFRQIQGYEAWQAQGETIERYDLQLGPDVRERFFWGKAVTRA 287
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS 397
+ +R + +LL D +LV PT P L + E + + LL I+
Sbjct: 288 QFDAACQLRERFTAWWDALLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLSHDLLLISV 346
Query: 398 VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
++ QVT+P+ P +SF+ G DR L++
Sbjct: 347 MTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVE 381
>gi|392538302|ref|ZP_10285439.1| amidase [Pseudoalteromonas marina mano4]
Length = 402
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 190/390 (48%), Gaps = 22/390 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+ + AV D+F ++G G+P W + A +T++ V+ L++ G G T DE A
Sbjct: 29 LSTMRLAVKDVFAVKGERNSAGNPSWFKAAKPAQQTASSVNKLMDTGCIFKGFTHTDELA 88
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ G N HY NP GGSS G+A AVA +L D LG DT G +R+P+++CG+
Sbjct: 89 YSLEGNNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGL 148
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RPS+ + G+IP++ DT+GW + ++L VG+VL LP A S ++I +
Sbjct: 149 FGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLEKVGNVL--LPNQAINSVNTLVICE 206
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
FEL+ ++ ++K T+ F KH + ++P++ EL +
Sbjct: 207 PLFELVSPALQAPLKQLLKKTKPFF-----KHHK-----EFELPNISLL----SELADSF 252
Query: 298 RLIQRYEFKNNHNEWIE--SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R++Q H +W++ P P I+A L ++ + +++ + ++ I+
Sbjct: 253 RILQGRAIAKAHKDWLQLPEPPPQFTPAIAARFKMALALTAQEEKEALNVQIQWQTLIAK 312
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKC 414
L L PTT PKLG + + + +L +IA +S QV +P+ +
Sbjct: 313 NLNSTSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSRSAQVHLPIANLANGH 369
Query: 415 PTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
P S + H D+ LL + A +++
Sbjct: 370 PYGFSLMMSHNNDKSLLACATQLAAYFKQE 399
>gi|225628576|ref|ZP_03786610.1| amidase [Brucella ceti str. Cudo]
gi|261219970|ref|ZP_05934251.1| amidase [Brucella ceti B1/94]
gi|261756331|ref|ZP_06000040.1| amidase [Brucella sp. F5/99]
gi|225616422|gb|EEH13470.1| amidase [Brucella ceti str. Cudo]
gi|260918554|gb|EEX85207.1| amidase [Brucella ceti B1/94]
gi|261736315|gb|EEY24311.1| amidase [Brucella sp. F5/99]
Length = 401
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 203/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPT------SVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PLG T +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDASFGISFIGPRGSDRTLIALAQTI 396
>gi|423101800|ref|ZP_17089502.1| hypothetical protein HMPREF9686_00406 [Klebsiella oxytoca 10-5242]
gi|376390626|gb|EHT03309.1| hypothetical protein HMPREF9686_00406 [Klebsiella oxytoca 10-5242]
Length = 394
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 191/395 (48%), Gaps = 33/395 (8%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
PP P+ PL+GL+FAV DLFD+ GY TG G+P +RT+ VV L++ GA
Sbjct: 12 PPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGVKTRTAPVVQKLLDNGA 71
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
IGKT E AYS++G N HY TP N AAP+ +PGGSSSG+A AV+ + DF+LG DT
Sbjct: 72 RFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNEACDFALGSDTG 131
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P+++CG+ G RP++G +S G P+ ++DT G+FAR P++ V L
Sbjct: 132 GSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSTVAACLF----- 186
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLK--------HENLGEYFD 277
DD AD + V + S E LF R L+ + L +F
Sbjct: 187 -----------DDGR------AD-ITGVRLASHEGLFSRLPLRSQQALLPVRQRLARFFG 228
Query: 278 SKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET 337
P L ++ R IQ YE E IE L PD+ ++
Sbjct: 229 PLAP-LDAPLPDADDIYLAFRQIQGYEAWQAQGETIERYGLQLGPDVRERFFWGKAVTRA 287
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS 397
+ +R + +LL D +LV PT P L + E + + LL I+
Sbjct: 288 QFDAACQLRERFTAWWDALLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLSHDLLLISV 346
Query: 398 VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
++ QVT+P+ P +SF+ G DR L++
Sbjct: 347 MTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVE 381
>gi|261323626|ref|ZP_05962823.1| amidase [Brucella neotomae 5K33]
gi|261299606|gb|EEY03103.1| amidase [Brucella neotomae 5K33]
Length = 401
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 202/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG V L DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVPL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|88809608|ref|ZP_01125115.1| amidase family protein [Synechococcus sp. WH 7805]
gi|88786358|gb|EAR17518.1| amidase family protein [Synechococcus sp. WH 7805]
Length = 400
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 202/391 (51%), Gaps = 19/391 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G +FA DLFD++G G G+P W + S + +T V L++ GA C G T +DEF
Sbjct: 20 PLQGHTFAAKDLFDLKGERRGCGNPHWRKRQSPSLSNATAVQQLLDAGAICTGSTTMDEF 79
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+ ++G + +P N A P + GGSSSG+A AVA VD +LG DT G +RVP+++CG
Sbjct: 80 AFGLSGESPWTGSPPNSANPGCITGGSSSGSAAAVARGDVDLALGTDTGGSIRVPASWCG 139
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSPRQ 232
+LG+RPS+GAVS G+ P++ SLDT G F+RDP++L VLL Q A +P +
Sbjct: 140 LLGWRPSHGAVSVQGLQPLAPSLDTTGLFSRDPQVLLAAAEVLLSSNKQRQSAEAPAPTR 199
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+ + + L+ P V +IKS+E+L Q + E +P K +
Sbjct: 200 LYWIPELWTDLEHP---VRSALIKSSEQL--SQTIHCEI------EALPLATFGLKNPQQ 248
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
L+N+ + IQ E + L P + + + S+ E R ++R
Sbjct: 249 LQNLFQTIQWDEIAATFAALPNDLP--LGPVLERNLAMVRNRSKGAQEQVIQHRQQVRDT 306
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEM--LSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
++++L D G+L P T P +G + + + L ++A +SG ++++P G
Sbjct: 307 LATVLGDHGLLAQPITPCTAPAIGSFSLDRGAGSLVGQLILLNALAGLSGAPELSIPTGG 366
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
D P + IA G DR LL T++ SL
Sbjct: 367 MDNKPLGLGLIASPGRDRLLLQTLEMCARSL 397
>gi|424919918|ref|ZP_18343281.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392848933|gb|EJB01455.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 389
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 197/385 (51%), Gaps = 32/385 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL AV DLFD+ GY T G+ + T+ +V TL+E GA +GKT DE
Sbjct: 23 PLSGLRLAVKDLFDVAGYPTSAGNAAVLAASGIKTATAPLVQTLLEAGACFVGKTNTDEL 82
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ G N H+ P NP P+ +PGGSSSG+AVAVAA L D LG DT G +R+P+A G
Sbjct: 83 AYSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAING 142
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR--DP--KILRHVGHVLLQLPFAAQRSPRQ 232
++G+RP++G++ + + P++ S D G+ R DP ++ VG +P A R P
Sbjct: 143 LVGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLDPMAAVMSAVG-----MPAANDR-PLS 196
Query: 233 IIIADDCFELLK-IPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
I+IA+D FE + AD ++ + S + + ++ F T+
Sbjct: 197 ILIAEDIFETIDGAIADEMIASLRSSAMPI----------------RRTAAICSFSLTDL 240
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
L ++Q+ +++N + E A+ PDI+A + + + IR +
Sbjct: 241 ALA-FTTILQKEAWESNQTLF-ERGPEAIAPDIAARLRSASRLDNEEVRTAYRIRKLFSA 298
Query: 352 AISSLLKDDGILVTPTTAYPPP-KLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
+ LL+++ ++ PT A PP + G E + +++ LL ++ +SGC Q+ P+
Sbjct: 299 KVDRLLRENVVVALPTLAMSPPTRDAGPESFAA-FRSACVKLLCLSGLSGCPQLAFPIAS 357
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQ 435
K S+S + DR L++ +
Sbjct: 358 RVKN-VSLSLLGARSADRMLMNMAR 381
>gi|332533367|ref|ZP_08409233.1| amidase [Pseudoalteromonas haloplanktis ANT/505]
gi|332037249|gb|EGI73705.1| amidase [Pseudoalteromonas haloplanktis ANT/505]
Length = 400
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
AV D+F ++G G+P W +T A T++ V+ L+ G IG T DE AYS+ G
Sbjct: 32 LAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELAYSLEG 91
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY NP GGSS G+A AVAA+L D LG DT G +R+P+++CG+ G RP
Sbjct: 92 NNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGLYGIRP 151
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+ + G+IP++ DT+GW + ++L VG+VL LP A + ++I + FEL
Sbjct: 152 SHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGNVL--LPNQAINNVDTLVICEPLFEL 209
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 302
+ ++ +++ T+ F KH E +S + + EL + R++Q
Sbjct: 210 VDSALQAPLKQLLEKTKPNF-----KHHKEFELPNSSLLN---------ELADSFRVLQG 255
Query: 303 YEFKNNHNEW--IESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
H +W ++ P P I+A L +++ + ++ + ++ I+ L +
Sbjct: 256 RAIAKTHKDWLQLQGQLPQFAPAIAARFNMALALTDQEEQEALKVQTQWQTLIAKNLNTN 315
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKCPTSVS 419
L PTT PKLG + + + +L +IA +SG QV +PL + P S
Sbjct: 316 SCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVHLPLADLANDHPYGFS 372
Query: 420 FIARHGGDRFLLDTVQNMYASLQE 443
+ HG D+ LL V+++ A ++
Sbjct: 373 LMMSHGNDKSLLACVKHLAAHFKQ 396
>gi|261215607|ref|ZP_05929888.1| amidase [Brucella abortus bv. 3 str. Tulya]
gi|260917214|gb|EEX84075.1| amidase [Brucella abortus bv. 3 str. Tulya]
Length = 401
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 202/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVRDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
V VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVCAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|319940606|ref|ZP_08014949.1| amidase [Sutterella wadsworthensis 3_1_45B]
gi|319805972|gb|EFW02730.1| amidase [Sutterella wadsworthensis 3_1_45B]
Length = 410
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 198/392 (50%), Gaps = 20/392 (5%)
Query: 43 LLPPPQ-PLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLV 101
+P P+ P+P PLTGL+FAV D+FD+ GY T G+P + +T++ V L+
Sbjct: 26 FMPYPEVPVPHAKEGPLTGLTFAVKDIFDVAGYPTSAGNPTFLALQGIKQKTASCVEKLL 85
Query: 102 EGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLG 161
GA GKT+ DE A+S+ G N H+ P N AP + GGSSSG+A AV+ LVDF+LG
Sbjct: 86 AAGAEFQGKTITDELAFSMQGANFHFGAPINGGAPDRYTGGSSSGSASAVSCGLVDFALG 145
Query: 162 IDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ 221
DT G +R P++ CG++G RP+ G + P+S S DTVG+FAR ++ V VL
Sbjct: 146 SDTGGSIRCPASQCGVIGLRPTVGRAALDHCQPLSKSFDTVGFFARRMEVFEKVAAVLYG 205
Query: 222 LPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP 281
+ + ++I DD + L D+V Q + K E G + G++
Sbjct: 206 QDANPEDTKPRLIFVDDIWTLF---GDKVQQALKKPYEAAVG--LFGSPASGQF------ 254
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAE--IGEMLEISETVI 339
S +G +T R +Q E + +IE+ P L P + + + + +
Sbjct: 255 SPQGLERTF----LAFRKLQTAEAWESDGSFIETYHPVLGPGVRERFILAKQWHVEDLSP 310
Query: 340 ENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVS 399
E + I+ E R+ ++ LLKDDG+ + PT +G E E ++ + L +S
Sbjct: 311 E--REIQAECRAHLTDLLKDDGLAILPTMPDAGIPVGASETFVERFRQKVSMCLCHGGLS 368
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
G +++PLG + P +S + G D +L+
Sbjct: 369 GFPWISLPLGTINGAPIGISLVGPKGRDLWLI 400
>gi|421724077|ref|ZP_16163321.1| amidase [Klebsiella oxytoca M5al]
gi|410375134|gb|EKP29771.1| amidase [Klebsiella oxytoca M5al]
Length = 394
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 197/406 (48%), Gaps = 28/406 (6%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
++ D AF+ PP P+ PL+GL+FAV DLFD+ GY TG G+P
Sbjct: 1 MQDDLRAFMPY-----PPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGI 55
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
+RT+ VV TL+ GA IGKT E AYS++G N HY TP N AAP+ +PGGSSSG+A
Sbjct: 56 KNRTAPVVQTLLNNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSAS 115
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AV+ ++ DF+LG DT G VR P+++CG+ G RP++G +S G P+ ++DT G+FAR P
Sbjct: 116 AVSNEVCDFALGTDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSP 175
Query: 210 KILRHVGHVLLQLPFAAQR---SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV 266
++ V L FA +R S ++ D F L + + + +Q V + + FG
Sbjct: 176 EVFSAVAACL----FADERADLSGVRLACHDGLFSRLPLRSQQALQPVRQRLARFFG--- 228
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
V L ++ R IQ YE E IE L D+
Sbjct: 229 ------------AVTPLAAPLPDVDDIYLAFRQIQGYEAWQAQGETIERYGLQLGSDVRE 276
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
++ + R + + L D +LV PT P L + E +
Sbjct: 277 RFFWGKAVTRAQFDAACQQRVRFAAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEEIEAVR 335
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
+ LL I+ ++ QVT+P+ P +SF+ G DR L++
Sbjct: 336 RLSHDLLLISVMTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVE 381
>gi|161620187|ref|YP_001594073.1| amidase [Brucella canis ATCC 23365]
gi|260568563|ref|ZP_05839032.1| amidase [Brucella suis bv. 4 str. 40]
gi|376277187|ref|YP_005153248.1| amidase [Brucella canis HSK A52141]
gi|161336998|gb|ABX63302.1| amidase [Brucella canis ATCC 23365]
gi|260155228|gb|EEW90309.1| amidase [Brucella suis bv. 4 str. 40]
gi|363405561|gb|AEW15855.1| amidase [Brucella canis HSK A52141]
Length = 401
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 202/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGLGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|306845477|ref|ZP_07478050.1| amidase [Brucella inopinata BO1]
gi|306274128|gb|EFM55947.1| amidase [Brucella inopinata BO1]
Length = 401
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 203/420 (48%), Gaps = 46/420 (10%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A L G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGALAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDELAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTE-----KLFG 263
VG VLL DD E LL +P + Q+++ E +F
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 264 RQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPD 323
+ NL + P+L + EL R IQ E NH WI S L P
Sbjct: 225 KVRPHFANLKA---ASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPG 276
Query: 324 ISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSE 383
I+ E++ +++N ++ R +++ + +L PT P +
Sbjct: 277 IADRFAYGAEMTPDMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPFTSEPFEALQ 336
Query: 384 DYQNRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
Y+ +A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 337 AYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|414072378|ref|ZP_11408322.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. Bsw20308]
gi|410805194|gb|EKS11216.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. Bsw20308]
Length = 401
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 191/384 (49%), Gaps = 22/384 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
AV D+F ++G G+P W +T A T++ V+ L+ G IG T DE AYS+ G
Sbjct: 33 LAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELAYSLEG 92
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY NP GGSS G+A AVAA+L D LG DT G +R+P+++CG+ G RP
Sbjct: 93 NNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGLYGIRP 152
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+ + G+IP++ DT+GW + ++L VG VL LP A + ++I + FEL
Sbjct: 153 SHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGSVL--LPNQAINNVDTLVICEPLFEL 210
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 302
+ ++ +++ T+ F KH E +S + + EL + R++Q
Sbjct: 211 VDPALQAPLKQLLEKTKPNF-----KHHKEFELPNSNLLN---------ELADSFRVLQG 256
Query: 303 YEFKNNHNEWIE--SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
H +W++ P P I+A L +++ + ++ + ++ I+ L +
Sbjct: 257 RAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQEALKVQTQWQTLIAKNLNTN 316
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKCPTSVS 419
L PTT PKLG + + + +L +IA +SG QV +PL + P S
Sbjct: 317 SCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVHLPLADLANDHPYGFS 373
Query: 420 FIARHGGDRFLLDTVQNMYASLQE 443
+ HG D+ LL V+++ A ++
Sbjct: 374 LMMSHGNDKSLLACVKHLAAHFKQ 397
>gi|296534565|ref|ZP_06896979.1| amidase [Roseomonas cervicalis ATCC 49957]
gi|296265105|gb|EFH11316.1| amidase [Roseomonas cervicalis ATCC 49957]
Length = 399
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 193/394 (48%), Gaps = 20/394 (5%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
LP + PL GL FA DLFDI G+ TG G+P+W R+H R + +V L++ GA G
Sbjct: 21 LPGRPGGPLAGLRFAAKDLFDIAGHPTGAGNPDWPRSHPVPQRHAWMVQRLLDAGADLAG 80
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KTV E + + G N+ TP NPAAP +PGGSSSG+A AVAA V+ LG DT G VR
Sbjct: 81 KTVTCEISLGLLGFNQFDGTPPNPAAPGCLPGGSSSGSASAVAAGEVEIGLGTDTGGSVR 140
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
VP++ CGI G RP++G + G+ + S DT GWF RD V +LL P A
Sbjct: 141 VPASLCGIYGLRPTHGRLPFEGVCQQAVSFDTTGWFTRDAATFARVAAILLDEPIPAP-G 199
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
P +++A+D F L + +Q + + E L G + +LG T
Sbjct: 200 PTPLLLAEDAFALAEAEVREALQAPLAALENLLGGPA-QRVSLG---------------T 243
Query: 290 NGEL---KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
GEL ++QR E WIE+ P +++ + +E S+R
Sbjct: 244 PGELAVWSGQRNILQRREGWRQFRPWIEAANPRFAFNVARNLAIASAFTEAQEVVAASVR 303
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
+R+ ++LL+ +L P+T + P LG + R L S A ++G Q+++
Sbjct: 304 ERVRARAAALLEGGAVLCIPSTPFTAPPLGLPLPELDALTERISQLTSFAGMAGLPQLSL 363
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
PLG P +S I G D L+ + A+
Sbjct: 364 PLGRAGGKPCGLSIIGARGSDARLVGIAAALEAA 397
>gi|261749862|ref|ZP_05993571.1| amidase [Brucella suis bv. 5 str. 513]
gi|261739615|gb|EEY27541.1| amidase [Brucella suis bv. 5 str. 513]
Length = 404
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 203/420 (48%), Gaps = 43/420 (10%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD +
Sbjct: 122 KLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCC---QVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 399
>gi|332141007|ref|YP_004426745.1| amidase [Alteromonas macleodii str. 'Deep ecotype']
gi|327551029|gb|AEA97747.1| amidase [Alteromonas macleodii str. 'Deep ecotype']
Length = 423
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 185/370 (50%), Gaps = 15/370 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL AV DLF I+G T G+P+W TH T+T V+T++ GA+ GKT+ DE A
Sbjct: 56 LKGLGLAVKDLFHIKGLPTAAGNPDWQATHDIPQATNTCVATMLNAGASFKGKTITDELA 115
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS++G NKHY NP AP+ +PGGSSSG+AVAV+A L D LG DT G +RVP+++ G+
Sbjct: 116 YSLHGQNKHYAPLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPASYQGL 175
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G R ++G + ++ ++ S DT+GW RD L+ V H + + + I A+
Sbjct: 176 WGLRTTHGLLPCDNMVALAPSFDTIGWMTRDLDTLQKVAHTCI------DNTKQSTIKAN 229
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
CF I S + ++ + + ++ K +
Sbjct: 230 PCF---GIATPLFANTAHSSVCNKWLTELADNNRCVALTEEQLDLFK------LQTAATF 280
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
R++Q E H EWIE+V+P + DI + I+ + K+ + + I++L
Sbjct: 281 RILQGSEIWQQHGEWIETVQPDIAKDIMLRLAWCKTITTQDVTLAKAQQKVVIDHINALF 340
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
D +LV PTT P+ E + +N +L +IA ++G Q+ +PL P
Sbjct: 341 NDFDVLVIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLPQLHLPLFTLHNAPCG 400
Query: 418 VSFIARHGGD 427
+S + + G D
Sbjct: 401 LSLVGKKGND 410
>gi|375259537|ref|YP_005018707.1| amidase [Klebsiella oxytoca KCTC 1686]
gi|397656606|ref|YP_006497308.1| amidase [Klebsiella oxytoca E718]
gi|365909015|gb|AEX04468.1| amidase [Klebsiella oxytoca KCTC 1686]
gi|394345180|gb|AFN31301.1| Amidase [Klebsiella oxytoca E718]
Length = 394
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 192/390 (49%), Gaps = 23/390 (5%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
PP P+ PL+GL+FAV DLFD+ GY TG G+P +RT+ VV L++ GA
Sbjct: 12 PPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTAPVVQKLLDNGA 71
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
IGKT E AYS++G N HY TP N AAP+ +PGGSSSG+A AV+ DF+LG DT
Sbjct: 72 RFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNAACDFALGSDTG 131
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G VR P+++CG+ G RP++G +S G P+ ++DT G+FAR P++ V L F
Sbjct: 132 GSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSAVAACL----FD 187
Query: 226 AQRSP---RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS 282
A+R+ ++ D F L + + + + V + + FG D+ +P
Sbjct: 188 AERADFNGVRLACHDGLFSRLPLRSQQALLPVRQRLARFFGPLA--------PLDAPLPD 239
Query: 283 LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
++ R IQ YE E IE L PD+ ++ +
Sbjct: 240 AD-------DIYLAFRQIQGYEAWQAQGETIERYGLQLGPDVRERFFWGKAVTRAQFDAA 292
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCC 402
+R + + L D +LV PT P L + E + + LL I+ ++
Sbjct: 293 CQLRERFTAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLSHDLLLISVMTQRP 351
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
QVT+P+ P +SF+ G DR L++
Sbjct: 352 QVTLPVAQTGGLPLGMSFLGPRGSDRLLVE 381
>gi|358460540|ref|ZP_09170722.1| Amidase [Frankia sp. CN3]
gi|357076239|gb|EHI85716.1| Amidase [Frankia sp. CN3]
Length = 558
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 189/387 (48%), Gaps = 19/387 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+ AV DLF + G+ G G+P W + A+ + V+ L+ GA G DE
Sbjct: 186 PLRGLTVAVKDLFAVAGHRAGAGNPAWLAEAAPAAEHAPAVAALLAAGADVTGLAQTDEL 245
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS++GTN HY TP NP AP +PGGSSSG A AVA LVD LG DT G VRVP+++CG
Sbjct: 246 AYSLSGTNVHYGTPPNPTAPGVIPGGSSSGPASAVALGLVDVGLGTDTGGSVRVPASYCG 305
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP++GAVS G++P++ S DTVGW RD L VG VLL A +P +++A
Sbjct: 306 LFGIRPTHGAVSAAGVVPLAPSFDTVGWLTRDAATLARVGAVLLPPADPALPAPGALLVA 365
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN- 295
DD L + + + S V +VP++ G L++
Sbjct: 366 DDLVALAEPDTAAALAGAVPSLAAAVDLPV-----------RRVPAIA-----AGRLRDW 409
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
R Q +E H W+ + L P I+ +++ + +++R ++R+ +
Sbjct: 410 FLAFRHGQGFEANQAHGAWVAAHPGVLGPGIAGRFAGAAAVTDEELTTARAVRAQVRATL 469
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ L +LV P T+ P P + + + +L A ++G V +PL
Sbjct: 470 GAALGTGAVLVVPATSGPAPAIDLAVEAKDRLRAATLTLTCAAGLAGLPVVVLPLLLVRG 529
Query: 414 CPTSVSFIARHGGDRFLLDTVQNMYAS 440
P ++ I G D LL + A+
Sbjct: 530 RPVGLALIGAPGTDHALLALATRVTAA 556
>gi|163844297|ref|YP_001621952.1| amidase [Brucella suis ATCC 23445]
gi|163675020|gb|ABY39130.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 401
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 202/417 (48%), Gaps = 40/417 (9%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
F A I K P +PL A PL G AV D++DI G VTG G+P+ A ++
Sbjct: 7 FNALIAK-----PEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ VV L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
L + +LG DT G +R P++FCG++G R ++G + GI+ ++ SLDT+GWFARD +
Sbjct: 122 KLANIALGSDTGGSIRTPASFCGLIGLRSAHGRIPLEGIMSLAPSLDTIGWFARDIALYE 181
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK 268
VG VLL DD E LL +P + Q+++ E R +
Sbjct: 182 KVGAVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFA 224
Query: 269 --HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ + P+L + EL R IQ E NH WI S L P I+
Sbjct: 225 KVRPHFATLKAASQPTL-----SIDELYLAFRQIQGAEPWENHGAWISSGNRQLGPGIAD 279
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 280 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 339
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 340 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 396
>gi|147767325|emb|CAN68995.1| hypothetical protein VITISV_008861 [Vitis vinifera]
Length = 503
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/162 (82%), Positives = 148/162 (91%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MAS SANLWVLLGLGLAG+LLMT+KLKK I++DFGAF+++LQLLPPPQP PPKAPHPLT
Sbjct: 1 MASSSANLWVLLGLGLAGVLLMTRKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTN 60
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
LSFAVSD+FDIEGYVTGFG+P+WARTH ASRTS VVS LVEGGATC GKTVVDE AYSI
Sbjct: 61 LSFAVSDVFDIEGYVTGFGNPDWARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSI 120
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGI 162
NG NKHY TPTNPAAPS++PGGSSSGAAVAVAA+ VDFSL +
Sbjct: 121 NGENKHYGTPTNPAAPSRIPGGSSSGAAVAVAANFVDFSLAM 162
>gi|392533768|ref|ZP_10280905.1| amidase [Pseudoalteromonas arctica A 37-1-2]
Length = 400
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 190/384 (49%), Gaps = 22/384 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
AV D+F ++G G+P W +T A T++ V+ L+ G IG T DE AYS+ G
Sbjct: 32 LAVKDVFAVKGERNSAGNPNWFKTAKPAKNTASSVNKLMTAGCNFIGFTHTDELAYSLEG 91
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
+N HY NP GGSS G+A AVAA+L D LG DT G +R+P+++CG+ G RP
Sbjct: 92 SNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGLYGIRP 151
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S+ + G+IP++ DT+GW + ++L VG +L LP A ++I + FEL
Sbjct: 152 SHNVIEKDGLIPLAPPFDTIGWLTQSAELLSSVGDIL--LPQQAINKVNTLVICEALFEL 209
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 302
+ ++ +++ T+ F KH E +S + + EL + R++Q
Sbjct: 210 VDPALQAPLKQLLEKTKPNF-----KHHKEFELPNSNLLN---------ELADSFRVLQG 255
Query: 303 YEFKNNHNEWIE--SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
H +W++ P P I+A L ++ + ++ + ++ I+ L +
Sbjct: 256 RAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTVQEEQEALKVQTQWQTLIAKNLNTN 315
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG-YYDKCPTSVS 419
L PTT PKLG + + + +L +IA +SG QV +PL + P S
Sbjct: 316 SCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVHLPLADLANDHPYGFS 372
Query: 420 FIARHGGDRFLLDTVQNMYASLQE 443
+ HG D+ LL V+++ A ++
Sbjct: 373 LMMSHGNDKSLLACVKHLAAHFKQ 396
>gi|398829190|ref|ZP_10587390.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
gi|398218048|gb|EJN04565.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
Length = 396
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 186/377 (49%), Gaps = 19/377 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G + AV D+FD+ G TG G+ + A+ T++ V L++ GA IGKT DE
Sbjct: 24 PLKGETLAVKDIFDVAGLPTGCGNRQKQGESPVANETASAVQHLLDAGAKFIGKTQTDEL 83
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+ G N HY P NPA+P ++ GGSSSG+A AVA + + G DT G +R P++FCG
Sbjct: 84 AFSLIGQNAHYPYPVNPASPDRVTGGSSSGSASAVAGGIASIATGTDTGGSIRAPASFCG 143
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G R S+G + G +P++ SLDT GWFARD + VG++LL + + R + I
Sbjct: 144 LIGLRTSHGRIPLDGTMPLAPSLDTFGWFARDIDLYEKVGNILLGADASEFKLKRPLFI- 202
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLK--HENLGEYFDSKVPSLKGFHKTNGELK 294
LL+ +++ E RQ+ K NLG ++ + + +L
Sbjct: 203 ----PLLE-------HLLVGEAEDAAYRQMYKLVSNNLGHARSARQST-----ASMDDLY 246
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
R IQ +E H W+ L P + I + R S I+
Sbjct: 247 LCFRQIQGFEAWATHGAWLSEKDRGLGPGVKERFEYAAAIDLETYQVQTKRRTLFTSEIA 306
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
LL+DDG+LV PT P + Y+ +A LL ++ +SG Q+T+PLG
Sbjct: 307 DLLQDDGVLVMPTVPGAAPLAATPFDEIQTYREQALHLLMLSGLSGVPQITLPLGQVHGA 366
Query: 415 PTSVSFIARHGGDRFLL 431
P +S + G D L+
Sbjct: 367 PFGISLLGPKGSDMALI 383
>gi|407974607|ref|ZP_11155515.1| amidase [Nitratireductor indicus C115]
gi|407429690|gb|EKF42366.1| amidase [Nitratireductor indicus C115]
Length = 392
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 185/385 (48%), Gaps = 19/385 (4%)
Query: 49 PLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
P+ A PL G + V D+FD+ GY T G P + A T++ V L++ GA I
Sbjct: 17 PVANSADGPLAGTTLGVKDIFDVAGYPTVGGQPSRLKEFPPAGETASAVQILLDAGARFI 76
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
GKT DE YS+ G N HY P N AAP ++ GGSSSG+A AVA L D ++G DT G +
Sbjct: 77 GKTQTDELTYSMMGMNAHYPAPVNRAAPQRVTGGSSSGSAAAVAGGLADIAVGSDTNGSI 136
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFAAQ 227
R P++FCG++G R ++G + G +P++ S DT GWFARD VG +LL + P A
Sbjct: 137 RAPASFCGLIGLRTTHGRIPLQGAMPLAPSFDTFGWFARDAATYAKVGELLLGEDPHEAP 196
Query: 228 RS-PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+ P +I + C L A+R V + G+ + + E + P+
Sbjct: 197 LTRPVRIAELEAC---LFGEAERSVYA------GMLGKVLHQFE--------RQPAFLAL 239
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
L R +Q YE H ++I +P L P + I + + + R
Sbjct: 240 PLAPERLTAAFRELQAYEAWQTHGDFITRAEPKLGPGVKERFEAASRIDRSAFDMARGTR 299
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
++L DD +L+ PT P + Y++ L ++A + G Q+T+
Sbjct: 300 ANFIQDFAALFDDDMVLIMPTQPTAAPMKSATAAELDSYRSLTAPLSALAGMLGWPQITI 359
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLL 431
PLG + P +S +A G DR L+
Sbjct: 360 PLGRVHEAPFGISLLAPAGSDRQLI 384
>gi|359789501|ref|ZP_09292446.1| amidase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254639|gb|EHK57624.1| amidase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 437
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 204/410 (49%), Gaps = 38/410 (9%)
Query: 55 PH----PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGK 110
PH PL GL AV D+FD+ GY TG G+P+ + A +T+ V +++ GA +GK
Sbjct: 20 PHAKSGPLAGLRLAVKDIFDVAGYKTGCGNPQRYEDAAPAEKTAPAVQVILDAGAEFVGK 79
Query: 111 TVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
T DE A+S+ G N H+ P NP+AP ++ GGSSSG+A AVA L D + G DT G +R
Sbjct: 80 TQTDELAFSLMGQNAHFPHPVNPSAPDRVTGGSSSGSAAAVAGGLADIATGSDTGGSIRA 139
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFA-AQR 228
P++FCG++G R ++G +S G +P++ SLDT GWFARD V V+L P + A
Sbjct: 140 PASFCGLIGLRTTHGRISLDGTMPLAPSLDTFGWFARDIGTYEKVAAVVLGAAPISDAGA 199
Query: 229 SPRQIIIADD--CFELLKIPADRVVQ---------VVIKSTEKL--FGRQVLKHENLGEY 275
+P + + D L P+ R + V+ + +L VL EY
Sbjct: 200 APHPLPVKDGERGAPTLVTPSPRPSRGEGKGEGQFTVLTNPLRLAALDSLVLGPIEAAEY 259
Query: 276 --FDSKVPSLKGFHKTNGELKN-------VMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
+ V ++ G T L + R +Q YE H +WI L P +
Sbjct: 260 RRMTAIVAAVIGEPATAPALSHSIDDLYWCFRKLQAYEAWAAHGDWILQRDRGLGPGVRE 319
Query: 327 --EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED 384
E G L+ E + RN R+ +++LL DG+LV PT P K+ +ED
Sbjct: 320 RFEFGSTLDSEVAAAETQR--RNAFRAELAALLGQDGVLVLPTVPSAAPL---KDSPAED 374
Query: 385 ---YQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
Y+ RA LL ++ +SG Q+T+P+G P +S + G D L+
Sbjct: 375 LQAYRERALRLLCLSGLSGFPQITLPIGEVHGAPFGISLLGPAGSDLALI 424
>gi|407972843|ref|ZP_11153756.1| putative amidase family protein [Nitratireductor indicus C115]
gi|407431614|gb|EKF44285.1| putative amidase family protein [Nitratireductor indicus C115]
Length = 399
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 191/394 (48%), Gaps = 18/394 (4%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
L P PL L F V D DI G+ T +G P W H A + V L+ GA C+G
Sbjct: 16 LAPLRHGPLDKLRFTVKDNIDIAGHKTSYGSPAWRNAHPAPVHNALCVDQLLAAGARCVG 75
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
K V DEF YS++G + H+ TP N AP ++PGGSSSG+A +VA + DFSL D G +R
Sbjct: 76 KAVADEFTYSLDGESFHFGTPRNAKAPDRIPGGSSSGSAASVANGIADFSLCTDAGGSIR 135
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
VP++ CG+ G RPS +S G++P S+ TVG A +L V+L P A S
Sbjct: 136 VPASLCGLWGMRPSTHRISEAGVLPFQPSVSTVGVLAERLDVLDAAMRVMLNGPAAPPPS 195
Query: 230 PRQIIIADDCFELLKIPA--DRVVQVV--IKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
P +III +D + PA D+ + I S L +V E +GE + +L G
Sbjct: 196 PGRIIILEDAMSIAS-PAVQDQAASALERIASRAGLALERVRFSEIIGEQSELSACNLNG 254
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+R +Q EF++ WIE+ KP L S G + + +
Sbjct: 255 -----------LRDLQTAEFQSTVGNWIEACKPELGFTFSMAYGNVQRFDRIAALDRLAN 303
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSE--DYQNRAFSLLSIASVSGCCQ 403
R + I++ D ++ PTT P+ G L + + A ++ + + + +
Sbjct: 304 RERLFRQINAFFTPDTVISFPTTPTIAPRKGSLNTLEAVMAFYDPAMTITAFSGAARLPE 363
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
++ PL + CP +SF+A + D FLL+ V+ M
Sbjct: 364 ISAPLLSVEHCPVGLSFVAGNYQDEFLLNAVREM 397
>gi|423113089|ref|ZP_17100780.1| hypothetical protein HMPREF9689_00837 [Klebsiella oxytoca 10-5245]
gi|376389631|gb|EHT02321.1| hypothetical protein HMPREF9689_00837 [Klebsiella oxytoca 10-5245]
Length = 394
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 194/411 (47%), Gaps = 38/411 (9%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
++ D AF+ PP P+ PL+GL+FAV DLFD+ GY TG G+P
Sbjct: 1 MQDDIRAFMPY-----PPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGV 55
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
+RT+ VV L++ GA IGKT E AYS++G N HY TP N AAP+ +PGGSSSG+A
Sbjct: 56 KTRTAPVVQKLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSAS 115
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AV+ + DF+LG DT G VR P+++CG+ G RP++G +S G P+ ++DT G+FAR P
Sbjct: 116 AVSNEACDFALGSDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSP 175
Query: 210 KILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLK- 268
++ V L DD AD + V + S E LF R L+
Sbjct: 176 EVFSTVAACLF----------------DDGR------AD-ITGVRLASHEGLFSRLPLRS 212
Query: 269 -------HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALD 321
+ L F P + ++ R IQ YE E IE L
Sbjct: 213 QQALLPVRQTLARLFGPVTPLGAPLPDVD-DIYLAFRQIQGYEAWQAQGETIERYGLQLG 271
Query: 322 PDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
PD+ ++ + R + + L D +LV PT P L +
Sbjct: 272 PDVRERFFWGKAVTRAQFDAACQQRERFTAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEE 330
Query: 382 SEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
E + + LL I+ ++ QVT+P+ P +SF+ G DR L++
Sbjct: 331 IEAVRRLSHDLLLISVMTQRPQVTLPVARTGGLPLGISFLGPRGSDRLLVE 381
>gi|152966046|ref|YP_001361830.1| amidase [Kineococcus radiotolerans SRS30216]
gi|151360563|gb|ABS03566.1| Amidase [Kineococcus radiotolerans SRS30216]
Length = 546
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 177/375 (47%), Gaps = 10/375 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ AV DL + G TG G P W + + L++ GA G DE
Sbjct: 165 PLTGIRVAVKDLVAVAGQRTGGGVPRWLEQARTEPVNAPALQALLDAGAGIAGIAQTDEL 224
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+ G N H+ P NPAAP ++PGGSSSG A AVA+ D LG DT G +RVP +F G
Sbjct: 225 AFSLLGVNAHHGVPPNPAAPGRVPGGSSSGCAAAVASGTADLGLGTDTAGSLRVPGSFSG 284
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ +RP++GAV G++P++ + DTVG ARD +L LL P PR ++ +
Sbjct: 285 LYAWRPTHGAVDAAGVLPLAPTFDTVGLLARDAGVLAVAAAALLTGPTHPPARPRALLRS 344
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
F++ + V+ +++ G + +++G F + +
Sbjct: 345 RTLFQVAEPATALAVEAALRALAVQTGLPLRDVDDVGVDFTGEEVT---------AWTTA 395
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
R +Q E +H +I + AL P + A + + ++ R+ ++++
Sbjct: 396 FRTVQAAEAWASHGAFITANPGALSPAVEARFRAGEGVGAETLNAARTTIEATRARLTAV 455
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L+ G L P+TA P P++ E + L ++AS +G + +P G P
Sbjct: 456 LR-GGWLCLPSTATPAPRIEATPDRFEAVRAGTLPLTTLASQTGVPALNLPWGRVGDLPV 514
Query: 417 SVSFIARHGGDRFLL 431
+ +A HG DR LL
Sbjct: 515 GLCVLAPHGQDRSLL 529
>gi|423107210|ref|ZP_17094905.1| hypothetical protein HMPREF9687_00456 [Klebsiella oxytoca 10-5243]
gi|376389336|gb|EHT02028.1| hypothetical protein HMPREF9687_00456 [Klebsiella oxytoca 10-5243]
Length = 394
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 194/411 (47%), Gaps = 38/411 (9%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
++ D AF+ PP P+ PL+GL+FAV DLFD+ GY TG G+P
Sbjct: 1 MQDDIRAFMPY-----PPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGV 55
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
+RT+ VV L++ GA IGKT E AYS++G N HY TP N AAP+ +PGGSSSG+A
Sbjct: 56 KTRTAPVVQKLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSAS 115
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP 209
AV+ + DF+LG DT G VR P+++CG+ G RP++G +S G P+ ++DT G+FAR P
Sbjct: 116 AVSNEACDFALGSDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSP 175
Query: 210 KILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLK- 268
++ V L DD AD + V + S E LF R L+
Sbjct: 176 EVFSTVAACLF----------------DDGR------AD-ITGVRLASHEGLFSRLPLRS 212
Query: 269 -------HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALD 321
+ L F P + ++ R IQ YE E IE L
Sbjct: 213 QQALLPVRQELARLFGPVTPLGAPLPDVD-DIYLAFRQIQGYEAWQAQGETIERYGLQLG 271
Query: 322 PDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
PD+ ++ + R + + L D +LV PT P L +
Sbjct: 272 PDVRERFFWGKAVTRAQFDAACQQRERFTAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEE 330
Query: 382 SEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
E + + LL I+ ++ QVT+P+ P +SF+ G DR L++
Sbjct: 331 IEAVRRLSHDLLLISVMTQRPQVTLPVARTGGLPLGISFLGPRGSDRLLVE 381
>gi|402487109|ref|ZP_10833934.1| amidase [Rhizobium sp. CCGE 510]
gi|401813939|gb|EJT06276.1| amidase [Rhizobium sp. CCGE 510]
Length = 378
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 194/389 (49%), Gaps = 27/389 (6%)
Query: 53 KAPH-PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
+AP PL+ L AV DLFD+ GY T G+P + T+ +V TL++ GA +GKT
Sbjct: 10 RAPTGPLSSLRLAVKDLFDVAGYPTAAGNPAVLAASGIKTATAPLVQTLLDTGACFVGKT 69
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
DE AYS+ G N H+ P NP P+ +PGGSSSG+AVAVAA L D LG DT G +R+P
Sbjct: 70 NTDELAYSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLP 129
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A G++G+RP++G++ + + P++ S D G+ R + + V + +P A R P
Sbjct: 130 AAINGLIGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLEPMAAVMSA-VGMPAAHDR-PS 187
Query: 232 QIIIADDCFELLK-IPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
I+I +D FE + AD ++ + S + K+ S+ F +
Sbjct: 188 SILIPEDIFETIDGAIADEMIASLRSSAMPI----------------RKIDSIASFSLAD 231
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
+ + ++QR + +N + E A+ PDI+A + + + + IR +
Sbjct: 232 LAVAFIT-ILQREAWTSNKTLF-ERSPDAIAPDIAARLRSGSRLDDEEVRAAYRIRKLLS 289
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
+ I LL ++ ++ PT A PP + +++ LL ++ +SGC Q+ P
Sbjct: 290 AEIDRLLCENVVVALPTLAMSPPTRDAQPESFAAFRSACIKLLCLSGLSGCPQLAFPAA- 348
Query: 411 YDKCP--TSVSFIARHGGDRFLLDTVQNM 437
C S+S + DR L++ +
Sbjct: 349 --SCAGNVSLSLLGAQSTDRMLMNVAGRL 375
>gi|424883497|ref|ZP_18307125.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392515158|gb|EIW39891.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 410
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 184/376 (48%), Gaps = 29/376 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+FAV DL DI G TG G+P+W + A+ + VV+ L+ GAT +GKTV DE A
Sbjct: 49 LAGLTFAVKDLIDIAGRRTGGGNPDWRAAATPAAAHAPVVTRLLANGATFLGKTVTDELA 108
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+S+ G N HY P NP P +PGGSSSG+A AV A LVDF+LG DT G VRVP+AF GI
Sbjct: 109 FSLEGRNIHYGIPRNPQNPDWLPGGSSSGSAAAVGARLVDFALGTDTGGSVRVPAAFSGI 168
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RPS+ AV G++P + S DT+GWFARD + L VG VL LP A I I +
Sbjct: 169 WGMRPSHYAVPLDGVLPFAPSYDTIGWFARDAQTLARVGDVL--LPPAQHVDCLTISIVE 226
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
D ++L + + QV +H PS +L+
Sbjct: 227 DTLDMLDPTDAHAFRDAARRLANAAPMQVFEHW----------PS--------AQLQWAY 268
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
IQ YE + ++++KP DI +S E ++R + L
Sbjct: 269 STIQGYEIARSLGSRLDALKPRFAMDIGERFASASAVSYADYETAAAVRQSFAGWLQDRL 328
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
+ + P T+ P ++ + +L ++A +G Q+ +C +S
Sbjct: 329 PPGTVALLPVTSAPHLRIDAPSEEIGRFYASTLALTALAGHAGAPQL--------QCGSS 380
Query: 418 -VSFIARHGGDRFLLD 432
+S + R G DR +L+
Sbjct: 381 PLSVMGRCGSDRAILN 396
>gi|126728595|ref|ZP_01744410.1| amidase [Sagittula stellata E-37]
gi|126710525|gb|EBA09576.1| amidase [Sagittula stellata E-37]
Length = 390
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 191/408 (46%), Gaps = 49/408 (12%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
PP + PL GL+ V D++D+ GY TG G P + V L+E GA
Sbjct: 15 PPVRVASAGGGPLAGLTLGVKDIYDVAGYRTGSGCPTALAMSEVKQANAPAVDALLEAGA 74
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT DE A+S+ G N H+ TP NPAAP ++PGGSSSG+AVAVAA L D ++G DT
Sbjct: 75 AFVGKTHTDELAWSMYGMNAHFGTPVNPAAPDRIPGGSSSGSAVAVAAGLCDIAVGSDTG 134
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ---- 221
G VR P++FCGI G RP++G +S + +++S DT G FARD + L VL++
Sbjct: 135 GSVRAPASFCGIWGIRPTHGVISLEAVQKLASSYDTCGLFARDGETLLRAMSVLMEDSAP 194
Query: 222 ----------LPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
L AQ P Q + D F ++ V +++T K F +
Sbjct: 195 LPDVPRLMRPLDMLAQLGPEQRAVYDAAFGGMEATEVSVYPEGVEATYKTFLTTMSA--- 251
Query: 272 LGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
D+KV + ++ M L++ + + + E + D AE+G
Sbjct: 252 -----DAKVDVVPFIRSSS------MPLVRGIDGRADAAEALT--------DAEAEVG-- 290
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS 391
++ R +A+ LL +G+L+ P P +L + + +++ A
Sbjct: 291 -----------RTARAAFTAAMDRLLGAEGVLLAPVVHDAPFRLDAPVEVFDGFRHDAMR 339
Query: 392 LLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
LL +A ++G QV +P D P VS I G D L+ + A
Sbjct: 340 LLCVAGLAGLPQVVMPARKVDGAPYGVSLIGPRGSDLSLIRAAMALSA 387
>gi|304393377|ref|ZP_07375305.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130]
gi|303294384|gb|EFL88756.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130]
Length = 390
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 184/389 (47%), Gaps = 19/389 (4%)
Query: 53 KAPH----PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
K PH PL GL AV D++ + GY G+G P + T +V+ +++ G
Sbjct: 16 KVPHAETGPLAGLKLAVKDIYQVAGYPNGWGSPTRLVEAEVDTETQSVIQQMLDAGIEVA 75
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
GK+ +E +S+ G NKHY P N AAP ++ GGSSSG+A V+A +V+ + G DT G V
Sbjct: 76 GKSQCEELCFSLTGINKHYGAPVNAAAPDRVTGGSSSGSASLVSAGVVEVATGSDTGGSV 135
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQR 228
R P+++CG++G RP+YG +S +P++ S D GWF +D + V V+L +
Sbjct: 136 RGPASYCGLIGLRPTYGRLSLDRTMPLADSYDCFGWFTKDGETFGKVADVVLGEDADDTK 195
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHK 288
R I + + +LL D K E + KH + +F+ L+
Sbjct: 196 LRRLIAVPELDAQLL---GDDDYLAYAKGAEI-----IEKHFDDERHFEPLPFDLE---- 243
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
E R+ Q YE + WIE KP L P + I++ E R E
Sbjct: 244 ---EAYWAFRVCQAYEAWQSLGPWIEKNKPQLGPGVKERFEFGASITKADFEKQVPKRLE 300
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
R A+ L+ DG+LV PT P E + ++ RA LL ++ SG Q+T+PL
Sbjct: 301 CRLALEELIGSDGLLVMPTMPSCAPLKNESEETLQAFRERALRLLCLSGNSGLPQITLPL 360
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
P VS I G DR L+ + +
Sbjct: 361 ATVHGAPLGVSIIGPRGSDRRLVRIAEAL 389
>gi|410861256|ref|YP_006976490.1| amidase [Alteromonas macleodii AltDE1]
gi|410818518|gb|AFV85135.1| amidase [Alteromonas macleodii AltDE1]
Length = 423
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 188/382 (49%), Gaps = 39/382 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL AV DLF I+G T G+P+W TH T+T V+T++ GA+ GKT+ DE A
Sbjct: 56 LKGLGLAVKDLFHIKGLPTAAGNPDWQATHDIPQATNTCVATMLNAGASFKGKTITDELA 115
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS++G NKHY NP AP+ +PGGSSSG+AVAV+A + D LG DT G +RVP+++ G+
Sbjct: 116 YSLHGQNKHYAPLVNPVAPANIPGGSSSGSAVAVSAHIADIGLGTDTGGSIRVPASYQGL 175
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA--QRSPRQIII 235
G R ++G + ++ ++ S DT+GW RD L+ V H + + + +PR I
Sbjct: 176 WGLRTTHGLLPCDNMVALAPSFDTIGWMTRDLDTLQKVAHTCIDNTKQSTIKVNPRFGIA 235
Query: 236 ---------ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD-SKVPSLKG 285
+ +C + L AD V + E D SK+ +
Sbjct: 236 TPLFANTAHSSECNKWLTELADNNPCVALTE----------------EQLDLSKLQTAAT 279
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
F R++Q E H EWIE V+P + DI + I+ + K+
Sbjct: 280 F-----------RILQGSEIWQQHGEWIEKVQPDIAKDIMLRLAWCKTITTQDVTLAKAQ 328
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
+ + I++L D +LV PTT P+ E + +N +L +IA ++G Q+
Sbjct: 329 QKVVIDHINALFNDFDVLVIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLPQLH 388
Query: 406 VPLGYYDKCPTSVSFIARHGGD 427
+PL P +S + + G D
Sbjct: 389 LPLFTLHNAPCGLSLVGKKGND 410
>gi|424876493|ref|ZP_18300152.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393164096|gb|EJC64149.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 391
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 188/379 (49%), Gaps = 35/379 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+FAV DL DI TG G+P+W + A+ + VV+ L+ GATC+GKTV DE A
Sbjct: 30 LAGLTFAVKDLIDIARRRTGGGNPDWRAAATPAAAHAPVVTRLLANGATCLGKTVTDELA 89
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+S+ G N HY P NP P +PGGSSSG+A AV A +VDF++G DT G VRVP+AF GI
Sbjct: 90 FSLEGRNVHYGIPRNPRNPDWLPGGSSSGSAAAVGARVVDFAIGTDTGGSVRVPAAFSGI 149
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RPS+ AV G+I + S DT+GWFARD + L VG VL LP A I I +
Sbjct: 150 WGMRPSHDAVPLDGVILFAPSYDTIGWFARDAQTLARVGDVL--LPPAPHVDCLTISIVE 207
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
D ++L PAD + F + P H + +L+
Sbjct: 208 DTLDMLD-PAD-----------------AHAFRDAARRFANAAPMRVFEHWPSAQLQWAY 249
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
IQ YE + ++++KP DI IS E ++R + L
Sbjct: 250 STIQGYEIARSLGSRLDALKPRFAMDIGERFASASAISYADYETAAAVRRSFAGWLQERL 309
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSED---YQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
+ + P T+ P ++ + LSE+ + +L ++A +G Q+ +C
Sbjct: 310 PPGTVALLPVTSVPHLRI---DALSEEIGRFYASTLALTALAGHAGTPQL--------QC 358
Query: 415 PTS-VSFIARHGGDRFLLD 432
+S +S + G DR +L+
Sbjct: 359 GSSPLSVMGGCGSDRAILN 377
>gi|424877918|ref|ZP_18301558.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392520410|gb|EIW45139.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 378
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 189/383 (49%), Gaps = 20/383 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL AV DLFD+ GY T G+ + T+ +V TL++ GA +GKT DE
Sbjct: 15 PLSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTSTAPLVQTLLDAGACFVGKTNTDEL 74
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ G N H+ P NP P +PGGSSSG+AVAVAA L D LG DT G +R+P+A G
Sbjct: 75 AYSLIGGNIHFGMPINPRDPHLVPGGSSSGSAVAVAAGLADIGLGTDTSGSIRLPAAVNG 134
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G+RP++G++ + + P++ S D G+ R + + V + +P AA P I+I
Sbjct: 135 LIGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLEPMAAVMSAV-GMP-AANDQPSSILIP 192
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D F + D V +I G + + + SL T
Sbjct: 193 KDIFATID---DAVADEMIARLRSA-GMPIRMTNAIASF------SLADLALT------F 236
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
+ ++QR +++N + E A+ PDI+A + + + + IR + I L
Sbjct: 237 ITILQREAWESNRTLF-ERSPEAIAPDIAARLLSGSHLVDEEVREAGRIRKLFSAEIDRL 295
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L+++ ++ PT A PP+ + +++ LL ++ +SGC Q+ P+
Sbjct: 296 LRENVVVALPTLATSPPRRDAEPESFAAFRSACIKLLCLSGLSGCPQLAFPI-VNCAGSG 354
Query: 417 SVSFIARHGGDRFLLDTVQNMYA 439
S+S G DR L+D + + A
Sbjct: 355 SLSLFGARGADRMLIDLARRLGA 377
>gi|152994488|ref|YP_001339323.1| amidase [Marinomonas sp. MWYL1]
gi|150835412|gb|ABR69388.1| Amidase [Marinomonas sp. MWYL1]
Length = 411
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 30/395 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL AV DLF + G T G+P W TH ++T++ VS L+ GA GKT+ DE
Sbjct: 34 PLSGLRLAVKDLFHMAGLPTSAGNPTWLATHPIPTKTASSVSALLSEGAIFCGKTITDEL 93
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+NG N HY TP+NP P ++PGGSSSG+AVAV++ L D LG DT G +RVP+++ G
Sbjct: 94 AYSLNGQNIHYGTPSNPVTPDRLPGGSSSGSAVAVSSGLADIGLGTDTGGSIRVPASYNG 153
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP++G + ++ ++ S DTVGW +D L VLL+ F+ + ++IA
Sbjct: 154 LFGLRPTHGVIPSDNMVALAPSFDTVGWLTKDLTTLEKTARVLLKSKFSKEFG--NVLIA 211
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
++ + + + Q+ + F ++ S V K + +
Sbjct: 212 NNLIDQVAHVKELRTQLKTWREQGHFAKE-----------SSIVIDTKAWKTS-----ET 255
Query: 297 MRLIQRYEFKNNHNEWIESV-----------KPALDPDISAEIGEMLEISETVIENCKSI 345
R +Q E + H +WI S+ + PDI IS + +
Sbjct: 256 FRTLQGAEIWHEHGKWINSLNSSDSLSEAEKQSVFAPDIWLRFHWCKTISAADVATAQQQ 315
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
R + + + +L+ PTT P E Y+N+ + +IA ++G Q+
Sbjct: 316 RQRFVDWLEHEI-EGSVLIIPTTPGLAPLFDAAEDELAAYRNQLMDITAIAGLAGLPQLH 374
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
+P+ D P +S + G D L++ +++ S
Sbjct: 375 LPVCILDGAPCGLSLVGSKGSDLALIEFAKHLMES 409
>gi|388568366|ref|ZP_10154785.1| amidase [Hydrogenophaga sp. PBC]
gi|388264411|gb|EIK89982.1| amidase [Hydrogenophaga sp. PBC]
Length = 393
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 173/371 (46%), Gaps = 21/371 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL AV DL D+ G TG G+P+WA +H + V+ L GA IGKT+ DE A
Sbjct: 26 LDGLRLAVKDLIDVAGAPTGGGNPDWADSHPVPDADAACVAMLRAAGARVIGKTITDELA 85
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+S+ G N + TP +P P ++PGGSSSG+A AVA D +LG DT G VRVP++FCG+
Sbjct: 86 FSLEGENAFFGTPRHPLQPDRLPGGSSSGSAAAVAWGEADIALGTDTGGSVRVPASFCGV 145
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
RPS+G V G++P + DTVGWFARD L VG VL F P
Sbjct: 146 AAMRPSHGRVPLAGVLPFAPGFDTVGWFARDVNTLHAVGQVL----FGGACGP------- 194
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
++P + + + +Q L + D+ + G + G+ +
Sbjct: 195 -----ARVPLRPCIALDALALADADVQQALLAWSRQAGIDAPREAFAGAWQAWGDAYAAL 249
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE-MRSAISSL 356
Q + + WI +P + I+ G+ L + ++ R+E R+ ++ L
Sbjct: 250 ---QGLDIREQLGPWIRQRRPRMGESIAPRFGQALALDPDTRPRWQAWRDEAARALVNRL 306
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
D+ LV + G S Y RA +L S+A + Q+ +P P
Sbjct: 307 GPDEAWLVPAAPCVALHRFAGSGERSNFYA-RALALGSLAGHAALPQIVLPFAAARGLPV 365
Query: 417 SVSFIARHGGD 427
VSFIA G D
Sbjct: 366 GVSFIAAPGQD 376
>gi|241666569|ref|YP_002984653.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862026|gb|ACS59691.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 378
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 189/383 (49%), Gaps = 20/383 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL AV DLFD+ GY T G+ + T+ +V TL++ GA +GKT DE
Sbjct: 15 PLSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTSTAPLVQTLLDAGACFVGKTNTDEL 74
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ G N H+ P NP P +PGGSSSG+AVAVAA L D LG DT G +R+P+A G
Sbjct: 75 AYSLIGGNIHFGMPINPRDPHLVPGGSSSGSAVAVAAGLADIGLGTDTSGSIRLPAAVNG 134
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G+RP++G++ + + P++ S D G+ R + + V + +P AA P I+I
Sbjct: 135 LIGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLEPMAAVMSAV-GMP-AANDQPSSILIP 192
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D F + D V +I G + + + SL T
Sbjct: 193 KDIFATID---DAVADEMIARLRSA-GMPIRMTNAIASF------SLADLALT------F 236
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
+ ++QR +++N + E A+ P+I+A + + + + IR + I L
Sbjct: 237 ITILQREAWESNRTLF-ERSPEAIAPNIAARLLSGSHLVDEEVREAGRIRKLFSAEIDRL 295
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
L+++ ++ PT A PP+ + +++ LL ++ +SGC Q+ P+
Sbjct: 296 LRENVVVALPTLATSPPRRDAEPESFAAFRSACIKLLCLSGLSGCPQLAFPI-VNCAGSG 354
Query: 417 SVSFIARHGGDRFLLDTVQNMYA 439
S+S G DR L+D + + A
Sbjct: 355 SLSLFGARGADRMLIDLARRLGA 377
>gi|163792910|ref|ZP_02186886.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [alpha proteobacterium BAL199]
gi|159181556|gb|EDP66068.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [alpha proteobacterium BAL199]
Length = 393
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 189/384 (49%), Gaps = 21/384 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA-SRTSTVVSTLVEGGATCIGKTVVDE 115
PLTGLSFA DLFD+ G+ TG G P+W ++ R + V TL++ GA +GKTV DE
Sbjct: 24 PLTGLSFAAKDLFDVAGHRTGAGSPDWGQSDPVVPDRHAWAVQTLLDAGADLVGKTVTDE 83
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+ I G + TP N AP ++PGGSSSG+A AVAA L D ++G DT G VRVP++FC
Sbjct: 84 VSLGILGESAFDGTPLNSKAPDRVPGGSSSGSAAAVAAGLCDTAIGTDTGGSVRVPASFC 143
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQRSPRQI 233
G+ G RP++G + G++P + S DT GWFARD V +L +P + P ++
Sbjct: 144 GLYGIRPTHGRLPLDGMMPQAPSSDTTGWFARDAATFARVSAAMLGEAIP---SKLPTRL 200
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
I+A D F ++ ++ L G E+L P L + +
Sbjct: 201 IVAVDAFGFADPETASALRQLLDRLSALIGD---TREDL-----LAPPGLSVWGRAQ--- 249
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
R +Q E +W++ P + +++ + ISE + + +R E R+ +
Sbjct: 250 ----RTLQPAEAYATFKDWLDRDNPRMAFNVARGLVMGSMISEADLGWARLMRQEARARL 305
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ LL IL PTT +P P G + R L + ++G QV++P
Sbjct: 306 TYLLPPGTILAMPTTPFPAPLKGLPLSQQNPIRERILCLAAHGGLAGFPQVSIPGAEVGS 365
Query: 414 CPTSVSFIARHGGDRFLLDTVQNM 437
P +S +A G D L+ Q +
Sbjct: 366 LPVGLSILAARGADAQLVAIAQAL 389
>gi|421748755|ref|ZP_16186306.1| amidase [Cupriavidus necator HPC(L)]
gi|409772486|gb|EKN54495.1| amidase [Cupriavidus necator HPC(L)]
Length = 370
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/389 (33%), Positives = 191/389 (49%), Gaps = 25/389 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL FA DLFD+ GY TG G+P S T+ V L++ GA +GKT DE A
Sbjct: 1 MRGLRFAAKDLFDVAGYPTGGGNPHVLAMSGVKSSTAPAVQCLLDAGAKFVGKTHTDELA 60
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+S+NG N HY P N AAP ++ GGSSSG+A AV+ L D +LG DT G VR P++ CG+
Sbjct: 61 FSMNGNNAHYGAPVNGAAPDRITGGSSSGSASAVSHGLCDLALGTDTGGSVRAPASHCGL 120
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-----QLPFAAQRSPRQ 232
G RP++G +S G +P+ SLDT G+FARD V VLL LP S R
Sbjct: 121 FGIRPTHGRISLAGCLPLCDSLDTCGFFARDIGTFARVADVLLGPDANALP----ASVRL 176
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
++ D D ++ V + + L + + + G+
Sbjct: 177 LLADDLFALAEPAARDALLPVAARIQDALGNGDAVAAAD----------------RPIGD 220
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
L R +Q +E + + IE L PD++A E++ + +R +
Sbjct: 221 LYWAFRYVQGWEAWRSDGDMIERYGLRLGPDVAARFAFSKEVTAGQRDEAMQVRRAFTAH 280
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
+++LL DDG+L+ PT P EDY+NRA +L +A +SG Q+T+PL +
Sbjct: 281 LAALLGDDGVLLLPTMPDIAPLRDAALDTLEDYRNRAVQMLCLAGLSGFPQITLPLCRRN 340
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASL 441
P +S + G DR L+ + A+L
Sbjct: 341 GAPLGLSLLGPAGSDRTLVALAGRVVAAL 369
>gi|331699129|ref|YP_004335368.1| amidase [Pseudonocardia dioxanivorans CB1190]
gi|326953818|gb|AEA27515.1| Amidase [Pseudonocardia dioxanivorans CB1190]
Length = 547
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 172/376 (45%), Gaps = 18/376 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+ AV D+ + G G G+P W +R++ V L+ GA G DEFA
Sbjct: 171 LDGLTVAVKDVLAVAGERMGLGNPTWLADQEPEARSAPAVQQLLAAGAAITGIARTDEFA 230
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ G N+HY TP NPAAP + GGS+SG A AVA VD LG DT G +RVP+++ G+
Sbjct: 231 YSLAGQNRHYGTPPNPAAPGCLSGGSTSGPAAAVALGQVDIGLGTDTAGSLRVPASYQGL 290
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFAAQRSPRQIIIA 236
+G R S+GA+S G+ P++ S DTVGW RD + V VLL P A S +I A
Sbjct: 291 VGVRTSHGAISVEGVHPLAPSFDTVGWLTRDVDVAARVADVLLAHRPNVAPGSRTAVIPA 350
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
+ I A+ +V E L G VL + V H
Sbjct: 351 LRGW----INAELDTRVTAALAE-LTGAGVL----------APVEDADLAHDEITAWARA 395
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
R++Q +E W A PD+ ++ + + + R + L
Sbjct: 396 FRVLQAFEVWQGQGGWARDHPGAFGPDVGGRFAFAATVTADQADTARETVRDARERLRRL 455
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVP-LGYYDKCP 415
L D +LV P ++ P P L + + ED + L +AS++G V +P L D P
Sbjct: 456 LADT-VLVLPASSGPAPSLHAGKDIVEDERTATVRLTQLASLAGAPAVALPVLWMSDGRP 514
Query: 416 TSVSFIARHGGDRFLL 431
+ + DR LL
Sbjct: 515 VGLCLVGAPDTDRALL 530
>gi|397164901|ref|ZP_10488356.1| amidase family protein [Enterobacter radicincitans DSM 16656]
gi|396094049|gb|EJI91604.1| amidase family protein [Enterobacter radicincitans DSM 16656]
Length = 389
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 189/382 (49%), Gaps = 31/382 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL+FA DLFD+ GY TG G+P + T+ V L++GGA +GKT E
Sbjct: 22 PLSGLTFAAKDLFDVAGYPTGGGNPHVLAASGIKTTTAPAVQMLLDGGARFVGKTHTSEL 81
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS++G N HY TP N AAP ++PGGSSSG+A AV+ L D +LG DT G VR P+++CG
Sbjct: 82 AYSMSGHNIHYGTPRNGAAPLRIPGGSSSGSASAVSNGLCDIALGTDTGGSVRTPASYCG 141
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP++G +S G P+ ++DT G+FAR P+ LL +P QI +A
Sbjct: 142 LFGLRPTHGRISLAGCQPLCATMDTCGFFARTPQAFSAAASCLLG---DDTFTPAQIELA 198
Query: 237 DDCFELL--KIPADRVVQVVIKSTEKLFGRQVLKHENLGE--YFDSKVPSLKGFHKTNGE 292
C E L +P Q ++ EKL ++ GE D+ +P + +
Sbjct: 199 --CHEALFAALP-PHSQQALLPVREKL-------AQHFGEIALLDAPLPEREAVY----- 243
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
R IQ YE + IE + L PD++ E + V E + ++R A
Sbjct: 244 --TAFRQIQGYEAWQSQGHNIERLGMQLGPDVA----ERFAYGKAVTEAEFAAACQLREA 297
Query: 353 ISSLLK---DDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
++ + D IL+ PT P L E + + LL IA ++ QV +P+
Sbjct: 298 FTAWWQTQLGDRILLLPTVPDAAPLLTAAPEEIEATRRISHDLLLIAVLTRRPQVNIPVT 357
Query: 410 YYDKCPTSVSFIARHGGDRFLL 431
D P +S I G D L+
Sbjct: 358 TIDGAPLGISLIGPCGSDALLV 379
>gi|444377811|ref|ZP_21177019.1| hypothetical protein D515_1695 [Enterovibrio sp. AK16]
gi|443678182|gb|ELT84855.1| hypothetical protein D515_1695 [Enterovibrio sp. AK16]
Length = 384
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 170/377 (45%), Gaps = 22/377 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
VSD I+ VTG G P WA H A + VVSTL+ G IGK VD+F SI+G
Sbjct: 28 LVVSDNVGIQDMVTGIGIPAWADGHEPAKNDAHVVSTLMHSGCRLIGKAQVDDFGTSISG 87
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N NP +P GGSSSGAA+AVA +G D GGV +P+++CG+ G+RP
Sbjct: 88 LNPFLANLKNPVSPEARLGGSSSGAAIAVAKGKATIGIGNDCCGGVLIPASYCGLYGYRP 147
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF-E 241
S G V GI P S S D VG+ R L V P A R + I+ A F E
Sbjct: 148 SQGMVDLRGITPFSPSFDAVGFMTRHLPTLEQVAEKCWTKPPRAGRL-KNIVNASSLFHE 206
Query: 242 LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQ 301
LL I A +++ EKL ++ +++ +P+L T N+ +I
Sbjct: 207 LLSIEA------LLEWEEKLSKSKIFRND---------MPNLSKLTLTQAH--NIHSVIL 249
Query: 302 RYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDG 361
E + +W++ KP + + ++ S K R ++
Sbjct: 250 GREIDLQYGQWLDVHKPKFSEETEEHLKQIRGKSFKDFVETKKKREFFSDSLQGFFGSGE 309
Query: 362 ILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFI 421
+L+ PT+ P + + + E + L +IA V+G Q+T+PL D P VS +
Sbjct: 310 VLMIPTS---PGQAPTEMFMDETFLINQRRLYAIAEVAGLAQLTLPLLMVDGTPMGVSLL 366
Query: 422 ARHGGDRFLLDTVQNMY 438
A G DR + + Y
Sbjct: 367 AHPGEDRLVFEAAARWY 383
>gi|209546084|ref|YP_002277974.1| amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209538941|gb|ACI58874.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 386
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 186/386 (48%), Gaps = 28/386 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL AV DLFD+ GY T G+ T+ +V TL+E GA +GKT DE A
Sbjct: 24 LFGLRLAVKDLFDVAGYPTAAGNAAVLVASGIKRATAPLVQTLLEAGACFVGKTNTDELA 83
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ G N H+ P NP P+ +PGGSSSG+AVAVAA L D LG DT G +R+P+A G+
Sbjct: 84 YSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAINGL 143
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL--LQLPFAAQRSPRQIII 235
+G+RP++G++ + + P++ S D G+ R L + V+ + +P A R P I+I
Sbjct: 144 IGWRPTHGSLDNRALRPLAPSFDVPGFMTRS---LESMAAVMSAVGMPAANDR-PISILI 199
Query: 236 ADDCFELLK-IPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+D FE + AD ++ + + + ++ + F +L
Sbjct: 200 PEDIFETIDGTIADEMIASIRSAAMPI----------------RRIDFISSFSLA--DLA 241
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
I + E ++ E A+ PDI+A + + + + + IR I
Sbjct: 242 VAFTTILQKEAWESNKTLFERSPDAIAPDIAARLRAGSRLDDGEMREARRIRTLFSGEIE 301
Query: 355 SLLKDDGILVTPTTAY-PPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
LL ++ ++ PT A PP + G E + +++ LL +A +SGC Q+ P+
Sbjct: 302 RLLCENMVIALPTLAMNPPTRDAGPESFAA-FRSACIKLLCLAGLSGCPQLAFPIASRVG 360
Query: 414 CPTSVSFIARHGGDRFLLDTVQNMYA 439
S+S D L++ + + A
Sbjct: 361 N-ASLSLFGARSTDSLLMNVARRIGA 385
>gi|381398558|ref|ZP_09923961.1| Amidase [Microbacterium laevaniformans OR221]
gi|380774049|gb|EIC07350.1| Amidase [Microbacterium laevaniformans OR221]
Length = 521
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 183/400 (45%), Gaps = 25/400 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL+ AV DLF I+GY G G+P + + A + ++ V L+ GGA+ G DEF
Sbjct: 138 PLSGLTVAVKDLFAIKGYRIGAGNPTYLDSARAETTSAPAVGDLLRGGASLRGIARTDEF 197
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYSI G N HY TP N A P +PGGSSSG A AVA D +L DT G VRVP+++ G
Sbjct: 198 AYSIAGDNAHYGTPPNAAVPGALPGGSSSGPASAVALGHADIALATDTAGSVRVPASYQG 257
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G R ++ V G++P++ S DTVGW RD L+ V L + A
Sbjct: 258 LWGLRTTHDLVPRQGLLPLAQSFDTVGWLTRDGATLQAVADWCLSYDGSDSTDSVFGASA 317
Query: 237 DDCFELLKIPADRVVQVVIKST---EKLFGRQVL--KHENLGEYFDSKVPSLKGFHKTNG 291
D ++P + + + E + L +H +LG+ + P
Sbjct: 318 ADLPWRFRVPVEALAAAEPATRAAFEAMIAASALPVEHVSLGDLDEYLGP---------- 367
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
R +Q E N+ +W+ + + P ++A ++ ++ +R
Sbjct: 368 -----FRTVQGAEAWRNNGDWLRAHPGSTGPAVAARFRAAAAVTAADESAARAALQPLRD 422
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL--- 408
+ +L++ D +L+ PT P P E + L + A V G ++VPL
Sbjct: 423 TLHALVR-DAVLLLPTVPGPAPSRSATGAQVEAVRTDTLRLTTPAPVGGLPALSVPLLTV 481
Query: 409 -GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADI 447
G P VS ++R G D L+ + ++A + E +
Sbjct: 482 DGAGGSAPVGVSLVSRAGTDIALVRLGRALHARITETESV 521
>gi|406904039|gb|EKD45935.1| Amidase family protein [uncultured bacterium]
Length = 517
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 196/396 (49%), Gaps = 23/396 (5%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+ P A L L+FAV D DI GY +G G P W +HS A + V L+ GA C G
Sbjct: 87 IEPSAQGKLNNLTFAVKDSIDICGYKSGCGSPLWLESHSKAVVNAVCVDQLLYSGAACCG 146
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KTV+ E + G N+ + NP + +PGGSSSG+A AVAA +VDFSLG D G +R
Sbjct: 147 KTVMGELGCGLTGINRFFKLVPNPKFSTHIPGGSSSGSAAAVAAGIVDFSLGTDAGGSIR 206
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
VP+++CG+ G RPS +S G+ +S S +TVG FA D ++ V VL+ + F
Sbjct: 207 VPASYCGVFGMRPSCEIMSLAGVSCLSPSFETVGIFANDIDVIDKVLSVLVPINFTKGSK 266
Query: 230 PRQ----IIIADDCFELLKIPADRVVQVVIKSTEKLFGR-QVLKHENLGEYFD--SKVPS 282
I + DCF+LL+ D + +G ++LK+ +G+ + S +
Sbjct: 267 KEDDVGTIYVLKDCFDLLE---DDL-------KNGFYGYIEILKNNYIGDVVEITSNMID 316
Query: 283 LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML-EISETVIEN 341
+ + G N + I YE N+ + W+ES + + + + ++ + ++
Sbjct: 317 AEVYDSEQG-WANTFKTIFCYEAWNSLSPWVESARLEFGKNTYVDFSALRNHVARSKLDV 375
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC 401
R I+S L + + PTT P+ G + +Y N L SI++V
Sbjct: 376 AIKQREIQFHKINSFLYPNNLFCIPTTPSIAPRRNGD--VKTEYPNFT-RLHSISNVGRL 432
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
Q++VPL + DK P +SFI H D LL TV+ +
Sbjct: 433 PQISVPL-FGDKTPIGLSFIGAHRSDFNLLATVKKL 467
>gi|384253772|gb|EIE27246.1| hypothetical protein COCSUDRAFT_38970 [Coccomyxa subellipsoidea
C-169]
Length = 570
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 212/465 (45%), Gaps = 54/465 (11%)
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
D +GID + GVRV +A G+ G+R S A G I+ LD +GW +DP +L
Sbjct: 70 DSATIGIGIDHLSGVRVQAACNGLWGYRASTNAGPKDGAGTIAGPLDALGWMTKDPALLT 129
Query: 214 HVGHVLLQLPFAAQRSP-RQIIIADDCFE-LLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
VG + LQLP + Q+I+A+D F+ +++ P +++ K+ G + +
Sbjct: 130 KVG-IALQLPGVVSKGDLLQVIVAEDLFKAVVQDPHHLLLRASYKAARAWAGHEEVARGL 188
Query: 272 LGEYFDSKVPSLKGF-----HKTNGELKNVMRLIQ-------RYEFKNNHNEWIESVKPA 319
+ + P+ F K ++ N+M ++ EF+ + + + A
Sbjct: 189 MMNFLFDACPAAHYFIQARDEKDRADVHNIMEGLRAAAAAVQAAEFRKAYGHLSQEPQSA 248
Query: 320 LDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTT-AYPPPKLGGK 378
P+I ++ E+SE + + + + + +L+D +L+ P + PP +
Sbjct: 249 -SPEILDQLKRAQEVSEEAVAQGRRVMEQAADQLKEILRDGNLLMLPVLPSAPPDRTAPP 307
Query: 379 EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL------- 431
E L+ ++ A L SIA+++G QV +P+ + P SV+ + D LL
Sbjct: 308 EELAA-FERAALQLCSIAALAGLPQVCIPVIVPGQPPASVALVGLQRSDMRLLTAAEKLG 366
Query: 432 ----DTVQNMYASLQEQADIATKSKLSTNTFNQKQ------------------------S 463
D + A+ Q A +AT +T + K+
Sbjct: 367 PLVTDAAVKLAAAQQHDAAVATNGGSATAAPSPKRPTANGTAKKAAAGSKAARSAASAAE 426
Query: 464 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTK 523
AE K GN+ +K + +A+ Y+ AI+LN ++ YYSNRA AYL+ F +AEADC +
Sbjct: 427 AETHKAAGNELFKAGSFEEAVKEYSSAIELNPDSPVYYSNRAMAYLQIMQFAEAEADCDR 486
Query: 524 AINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 568
A+ + +VK LRRGTAR A DF L LEP N++A
Sbjct: 487 ALKRE-ISVKTLLRRGTARRGKHDLDGARADFKQVLALEPKNRQA 530
>gi|374364534|ref|ZP_09622636.1| amidase [Cupriavidus basilensis OR16]
gi|373103831|gb|EHP44850.1| amidase [Cupriavidus basilensis OR16]
Length = 345
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 175/352 (49%), Gaps = 21/352 (5%)
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
T+ V L++ GA +GKT DE A+S+NG N HY P N AAP ++ GGSSSG+A AV+
Sbjct: 11 TAPTVQRLLDNGAAFVGKTHTDELAFSMNGKNAHYGAPVNGAAPGRITGGSSSGSASAVS 70
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
L DF+LG DT G VR P++ CG+ G RP+ G +S + + S DT G+FARD +
Sbjct: 71 NQLCDFALGTDTGGSVRAPASHCGLFGIRPTVGRISLAQTLALCDSFDTCGFFARDIRTF 130
Query: 213 RHVGHVLLQL-PFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN 271
V VLL P SPR +++A+D F + PA + V+ E FG
Sbjct: 131 ARVADVLLGGDPRPLPASPR-LLLAEDLFRMPTAPALDALLPVVGGIEAAFG-------- 181
Query: 272 LGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
K + + ++ R +Q +E IE L PD++A
Sbjct: 182 -------KATPVTVADRPLEDIWWAFRYVQGWEAWQTDGAMIEQYGLQLGPDVAARFAFS 234
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTA--YPPPKLGGKEMLSEDYQNRA 389
++E E ++R + + +++LL +D +L+ PT P G+E+ E Y+N +
Sbjct: 235 KGVTEAQFEASSAVRRDFTAHLAALLGNDAVLILPTMPDIAPLSDAAGEEL--ETYRNLS 292
Query: 390 FSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
L +A +SG +++PL P +S + G DR L+ + + A+L
Sbjct: 293 AQTLCLAPLSGFPHLSLPLASRAGAPLGISLMGPAGSDRSLIAFAEKLVAAL 344
>gi|283457056|ref|YP_003361620.1| aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A
[Bifidobacterium dentium Bd1]
gi|283103690|gb|ADB10796.1| GatA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Bifidobacterium dentium Bd1]
Length = 543
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 184/391 (47%), Gaps = 28/391 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GLS AV DL+ +EGY G G + S V L++ GA +G + DEF
Sbjct: 154 PLRGLSVAVKDLYGVEGYAIGAGSEAFLAEGIPQQHNSWPVQRLLDAGADVLGISRTDEF 213
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ GTN HY TP NP AP ++ GGSSSG+A A A VD LG DT G VRVPS++
Sbjct: 214 AYSLAGTNAHYGTPPNPQAPGRISGGSSSGSASATALGQVDIGLGSDTGGSVRVPSSYQH 273
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-PRQIII 235
+ G R + G+V G++P+S S DTVGW R P +L V VL+ + + ++I
Sbjct: 274 LWGIRTTCGSVPMEGVLPLSQSFDTVGWMTRTPDLLEKVAKVLITQESGVESALSGKVIW 333
Query: 236 ADDCFELLKIPADRVVQVVIKSTEK-------LFGRQVLKHENLGEYFDSKVPSLKGFHK 288
+++ I + I E+ + Q+ LG F+ + P
Sbjct: 334 SEELMSSTNIDVSAGLHAWISRLEESARNATDVSLEQIRLDGILGPRFEGEGPDRL---- 389
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
+ + +++Q YE NH W+ L DI + SE EN ++ R
Sbjct: 390 --SDWLSSYKIVQGYEAWRNHGTWLARHWNTLGADIES---RFRTASELTAENYRNAREH 444
Query: 349 M---RSAISSLLKDDGILVTPTTAYPPPK-----LGGKEMLSEDYQNRAFSLLSIASVSG 400
M ++ + S+L +L+ P+T+ PK +GG + ED + L IA ++G
Sbjct: 445 MDFWKTNVRSILGQS-VLLVPSTSSVAPKITDSAIGGTSI--EDERTATMRLTCIAGLTG 501
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
V +P+ D P + + G D L+
Sbjct: 502 LPAVNIPIRTEDGLPCGICAVGPAGSDTELI 532
>gi|326330930|ref|ZP_08197230.1| amidase [Nocardioidaceae bacterium Broad-1]
gi|325951288|gb|EGD43328.1| amidase [Nocardioidaceae bacterium Broad-1]
Length = 483
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 178/383 (46%), Gaps = 32/383 (8%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G + AV DLF + G+ G G P W +S + V+ L++ GA+ G +EFA
Sbjct: 129 LSGETVAVKDLFAVAGFAVGAGSPAWLEQAPVSSTHAAAVAALLDAGASVRGIARTEEFA 188
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS++G N HY P NP AP ++PGGSSSG+A AVA LG DT G +RVP+A+ G+
Sbjct: 189 YSLSGLNAHYGAPPNPKAPDRIPGGSSSGSATAVALGHASIGLGSDTGGSIRVPAAYQGL 248
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G R S+GAVS G++P++ + DTVGW R +L+ VG VL LP A SP +
Sbjct: 249 YGIRTSHGAVSREGLLPLAKAFDTVGWMTRSAFLLQAVGDVL--LPEAVPSSPASV---- 302
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG---ELK 294
E+ +P+ L E++ +P + E +
Sbjct: 303 --DEIHLVPS----------------LVALAEEDVATAVSEALPEAQPLAWAPARLDEWR 344
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
+ Q Y+ H W+E+ L + ++ + +++ ++ R+ I
Sbjct: 345 QAFAIGQAYQAWQAHGAWLETRLDTLGEAVRGRFEMARTVTRKQADEARAVLSQARAEIL 404
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
++ D +L P+ + P + +D L IA ++G V++P+
Sbjct: 405 DVVGDR-VLAYPSASSVAPTAAEAAGVRDD----TLRLTCIAGIAGLPAVSIPVRTPTNL 459
Query: 415 PTSVSFIARHGGDRFLLDTVQNM 437
P + +A G DR LL Q++
Sbjct: 460 PAGLCLVAAPGRDRDLLALAQSL 482
>gi|323357775|ref|YP_004224171.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium
testaceum StLB037]
gi|323274146|dbj|BAJ74291.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium
testaceum StLB037]
Length = 560
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 179/388 (46%), Gaps = 15/388 (3%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+ AV DLF I G+ G G+P + T+ V+ L+ GA+ G DEFA
Sbjct: 181 LAGLTVAVKDLFAIAGFRIGAGNPAFLEEARPEKVTAPAVADLLRAGASLRGIARTDEFA 240
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YSI G N HY TP N A +PGGSSSG A AVAA D L DT G +RVP+++ G+
Sbjct: 241 YSIAGDNVHYGTPPNGAVVGALPGGSSSGPASAVAAGHADIGLATDTAGSIRVPASYQGL 300
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G R ++ V G++P++ S DT+GW RD L+ V L +A D
Sbjct: 301 WGLRTTHDLVPRQGMLPLAQSFDTIGWLTRDGDTLQRVADWCLSYDGSATTENVYGASGD 360
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK--- 294
D +P + +++ +T + F + V L D P + H G+L
Sbjct: 361 DLPWRFLVP-EEILECAEPATREAFSKLVAA---LAASDDP--PPFRAVH--TGDLDAAF 412
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
R +Q E N+ EW+ + A+ P ++ I+ + + + ++
Sbjct: 413 AAFRTVQGAEAWRNNGEWMTAHPGAVGPAVAERFSVASRIAAADEAAAREDLEPIAAHLA 472
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
L+ D +L+ PT P P+ + + + + + A+++G ++VPL D
Sbjct: 473 ELV-DGAVLIFPTVPGPAPQ---RTADVDAVRAATLRMTAPAAIAGLPSISVPLLTVDGA 528
Query: 415 PTSVSFIARHGGDRFLLDTVQNMYASLQ 442
P + ++R G D L+ + + A ++
Sbjct: 529 PVGLCLVSRAGTDIALVRLARRLAALVE 556
>gi|111022991|ref|YP_705963.1| amidase [Rhodococcus jostii RHA1]
gi|110822521|gb|ABG97805.1| possible amidase [Rhodococcus jostii RHA1]
Length = 454
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 178/395 (45%), Gaps = 27/395 (6%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G+ AV+DL+ + G G G + T+ VV+ L+ GA +G
Sbjct: 77 PTGDGPLAGMRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
D+ Y +G N+ + TP NP A ++PGG++SGAA AVA D LGIDT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDRLPGGATSGAASAVAQGSADIGLGIDTTGSVRIP 196
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+++ G+ GF PS GAVS G+ P+S + DT W D L V L LP A+ R
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGAL--LPLTAETPFR 254
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ +D + + A V+ + + EK S +P L G
Sbjct: 255 SALTSDGINAVAEAGALGAVRRALTAWEK-----------------SSLPRLTWTDTDIG 297
Query: 292 ELK---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L + + +Q YE H +W+ +L + + I E+ E
Sbjct: 298 RLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFADASRIWESTYGRKLIKLGE 357
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN--RAFSLLS-IASVSGCCQVT 405
I++ + D +L+ T++ PP + + ++N RA +L+ +A++SG T
Sbjct: 358 ASQTITAYVGDSLLLLPATSSTPPERT--SYPSGDRFRNTMRATGMLTCLATISGLPNAT 415
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
VPL D P + + HG DR +L V + S
Sbjct: 416 VPLRTDDGVPVGLCLVGPHGRDRDVLAVVAGLGGS 450
>gi|111223659|ref|YP_714453.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Frankia alni ACN14a]
gi|111151191|emb|CAJ62902.1| putative glutamyl-tRNA(Gln) amidotransferase, subunit A [Frankia
alni ACN14a]
Length = 378
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 168/387 (43%), Gaps = 32/387 (8%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
L P PL GL AV DLF + GY G G+P W + V L GA G
Sbjct: 10 LAPTGCGPLDGLRVAVKDLFAVGGYRIGAGNPRWLAEAPVEPVDAQAVRALRAAGAAIAG 69
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
DE A+S++G N HY TP NPAAP ++PGGS+SG A AVAA D LG DT G +R
Sbjct: 70 IAQTDELAFSLSGANVHYGTPPNPAAPDRVPGGSTSGPASAVAAGQADVGLGTDTAGSIR 129
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
VP++ CG+ G RP++G V G++ ++ S D VGW DP +LR VG+VLL P A R
Sbjct: 130 VPASVCGLYGLRPTHGTVGAGGVLGLAPSFDAVGWLTADPGLLRAVGNVLLPPPAGAPRP 189
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
++ +A +PA + + G V + + E D +P
Sbjct: 190 AARLFVAG------PLPA-----AAVGTLTDALGADV-RTGGVHELGD--IPG------- 228
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
L R++Q E H WI + AL D+ E V + +
Sbjct: 229 ---LVAAFRVVQAAEAWRLHGAWITAHPRALGADVE----ERFRFGAGVDAGAERVARRQ 281
Query: 350 RSAISSLLKD----DGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
+A + L D D LV P P G + ++ +AS G
Sbjct: 282 IAAGRARLLDRLGADTWLVLPAAGGPGHLRGSGARDRDAWRQATLGCTVVASAYGLPSCV 341
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLD 432
+P P ++ + G DR LLD
Sbjct: 342 LPTPRTQGGPVGLALVGPPGADRGLLD 368
>gi|345299640|ref|YP_004828998.1| amidase [Enterobacter asburiae LF7a]
gi|345093577|gb|AEN65213.1| Amidase [Enterobacter asburiae LF7a]
Length = 374
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 184/393 (46%), Gaps = 57/393 (14%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L FAV D DI GY T G P A T AA ++VVS L+E GKT + E A+ +
Sbjct: 21 LRFAVKDTLDIAGYRTQAGCPALA-TSPAAHSHASVVSQLLENRCVLTGKTTLHELAFGV 79
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N TP N P+ +PGGSSSG+A VA+ VDFSLG DT G VR+P+A CG++G
Sbjct: 80 TGINPRCGTPVNSRFPALIPGGSSSGSAAVVASGEVDFSLGTDTGGSVRMPAACCGVMGL 139
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS---PRQIIIA- 236
+P YG +S G++P +SLD VG F RD +LR V L +P A + P ++A
Sbjct: 140 KPGYGVLSRQGVMPAESSLDCVGVFTRDAAVLRQV-MTRLSVPVDAPLNALPPVAFVLAA 198
Query: 237 ----DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
D C + + Q + E +P L+ H+
Sbjct: 199 EPDIDACI------LNALSQAGVSPQEI------------------TLPLLEEAHRAG-- 232
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKP-----ALDPDISAEIGEMLEISETVIENCKSIRN 347
+ LI +H W+ ++ P A+ PD+++ I +S +E + +R
Sbjct: 233 ----LTLI-------SHENWL-ALGPLLASGAVSPDVASRIRAGANVSREALELAEKVRV 280
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLG-GKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
+ ++L+ +L T PP L ++ L+ R L+ ++SG +T+
Sbjct: 281 AFSEHLDAVLEQTPLLALATLPELPPTLQEAQDPLTVVNLTR---LVRPFNLSGHPAITL 337
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
P+G D P ++ +AR G D L+ + + A
Sbjct: 338 PVGEIDGRPVALQLVARKGQDGLLVQAAEWLTA 370
>gi|226365496|ref|YP_002783279.1| amidase [Rhodococcus opacus B4]
gi|226243986|dbj|BAH54334.1| putative amidase [Rhodococcus opacus B4]
Length = 454
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 176/390 (45%), Gaps = 23/390 (5%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PLTGL AV+DL+ + G G G + T+ VV+ L+ GA +G
Sbjct: 77 PTGDGPLTGLRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
D+ Y +G N+ + TP NP A ++PGG++SGAA AVA D LG+DT G VR+P
Sbjct: 137 QTDDLGYGHSGVNQQFGTPPNPRAEDRLPGGATSGAASAVAQGGADIGLGVDTTGSVRIP 196
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+++ G+ GF PS GAV+ G+ P+S + DT W D L V L LP A+ R
Sbjct: 197 ASYQGLYGFAPSRGAVATDGLFPLSPTFDTPAWVCSDLDTLVAVSGAL--LPLTAETPFR 254
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ +D + + A V+ + + EK S +P L G
Sbjct: 255 GALTSDGINAVAEAGALGAVRRALTAWEK-----------------SSLPRLTWTDTDIG 297
Query: 292 ELK---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L + + +Q YE H +W+ +L + + I ET ++ E
Sbjct: 298 RLPDWYDAVVDVQGYEAWRLHGDWVSQAMSSLGTEPGRNFADASRIWETTYGRKLTMLAE 357
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS-IASVSGCCQVTVP 407
I++ + D +L+ T++ P + G R +L+ +AS+SG TVP
Sbjct: 358 ASQTITAYVGDSLLLLPATSSVAPERKGDTSGGRFRNTMRTTGMLTCLASISGLPNATVP 417
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
L D P + + +G DR +L V ++
Sbjct: 418 LRTDDGSPVGLCLVGPYGRDRDVLAVVASL 447
>gi|309800743|ref|ZP_07694878.1| Amidase [Bifidobacterium dentium JCVIHMP022]
gi|308222588|gb|EFO78865.1| Amidase [Bifidobacterium dentium JCVIHMP022]
Length = 543
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 183/391 (46%), Gaps = 28/391 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GLS AV DL+ +EGY G G + S V L++ GA +G + DEF
Sbjct: 154 PLQGLSVAVKDLYGVEGYAIGAGSEAFLAEGIPQQHNSWPVQRLLDAGADVLGISRTDEF 213
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ GTN HY TP NP AP ++ GGSSSG+A A A VD LG DT G VRVPS++
Sbjct: 214 AYSLAGTNAHYGTPPNPQAPGRISGGSSSGSASATALGQVDIGLGSDTGGSVRVPSSYQH 273
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-PRQIII 235
+ G R + G+V G++P+S S DTVGW R P +L V VL+ + + ++I
Sbjct: 274 LWGIRTTCGSVPMEGVLPLSQSFDTVGWMTRTPDLLEKVAKVLITQESGVESALSGKVIW 333
Query: 236 ADDCFELLKIPADRVVQVVIKSTEK-------LFGRQVLKHENLGEYFDSKVPSLKGFHK 288
+++ I + I E+ + Q+ LG F+ + P
Sbjct: 334 SEELMSSTNIDVSAGLHAWISRLEESARNATDVSLEQIRLDGILGPRFEGEGPDRL---- 389
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
+ + +++Q YE NH W+ L DI + SE EN ++ R
Sbjct: 390 --SDWLSSYKIVQGYEAWRNHGTWLARHWNTLGADIES---RFRTASELTAENYRNAREH 444
Query: 349 M---RSAISSLLKDDGILVTPTTAYPPPK-----LGGKEMLSEDYQNRAFSLLSIASVSG 400
M ++ + S+L +L+ P+ + PK +GG + ED + L IA ++G
Sbjct: 445 MDFWKTNVRSILGQS-VLLVPSASSVAPKITDSAIGGTSI--EDERTATMRLTCIAGLTG 501
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
V +P+ D P + + G D L+
Sbjct: 502 LPAVNIPIRTEDGLPCGICAVGPAGSDTELI 532
>gi|423121983|ref|ZP_17109667.1| hypothetical protein HMPREF9690_03989 [Klebsiella oxytoca 10-5246]
gi|376393291|gb|EHT05951.1| hypothetical protein HMPREF9690_03989 [Klebsiella oxytoca 10-5246]
Length = 390
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 183/399 (45%), Gaps = 44/399 (11%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FA D DI GY T G P A + + + L GG GKT + E A+ +
Sbjct: 27 LTFAAKDTLDIAGYPTRAGSPVLQNAPEATAHATVIQQLLDSGGCQLQGKTTLHELAFGV 86
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N TP NP P+ +PGGSSSG+A VAA VDF++G DT G VR+P+A CGI+G
Sbjct: 87 TGINAWSGTPLNPRYPALIPGGSSSGSATVVAAGEVDFAIGTDTGGSVRMPAACCGIVGL 146
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P++G VS G++P +SLD VG+F+RD LR V R P +I A
Sbjct: 147 KPTWGRVSRQGVMPADSSLDCVGFFSRDVATLRQV----------LARLPGEIAPAVSAH 196
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENL--------GEY-FDSKVPSLKGFHKTNG 291
+ +T LFG E L G + D+ +P+ H+
Sbjct: 197 Q--------------AATAFLFGHATTDIEQLIRARLAQAGMFPADATLPAFAEAHQAG- 241
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ +I + ++ + + KP L D++ + EIS + + IR
Sbjct: 242 -----LTVISQENWQAFQS---LAEKPELAEDVAVRLRAGAEISPHQRQAAERIRQTFTE 293
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
A+ + L ++ PT PP L +E + L+ ++SG +T+P+G
Sbjct: 294 AVDAQLARTPFILLPTLPACPPTL--EEAANPLNVVNLTRLVRPFNLSGHPALTLPVGEI 351
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATK 450
++ P ++ +A D LL +++ A LQ +D +K
Sbjct: 352 NQRPVALQIVAGKNKDYELLCFAESLMAKLQYPSDSQSK 390
>gi|397736411|ref|ZP_10503093.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Rhodococcus sp. JVH1]
gi|396927601|gb|EJI94828.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Rhodococcus sp. JVH1]
Length = 454
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 178/395 (45%), Gaps = 27/395 (6%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G+ AV+DL+ + G G G + T+ VV+ L+ GA +G
Sbjct: 77 PTGDGPLAGMRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
D+ Y +G N+ + TP NP A ++PGG++SGAA AVA D LGIDT G +R+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDRLPGGATSGAASAVAQGSADIGLGIDTTGSIRIP 196
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+++ G+ GF PS GAVS G+ P+S + DT W D L V L LP A+ R
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGAL--LPLTAETPFR 254
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ +D + + A V+ + + EK S +P L G
Sbjct: 255 SALTSDGINAVAEAGALGAVRRALTAWEK-----------------SSLPRLTWTDTDIG 297
Query: 292 ELK---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L + + +Q YE H +W+ +L + + I E+ E
Sbjct: 298 RLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPDRNFADASRIWESTYGRKLIKLGE 357
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN--RAFSLLS-IASVSGCCQVT 405
I++ + D +L+ T++ PP + + ++N RA +L+ +A++SG T
Sbjct: 358 ASQTITAYVGDSLLLLPATSSTPPERT--SYPSGDRFRNTMRATGMLTCLATISGLPNAT 415
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
VPL D P + + HG DR +L V + S
Sbjct: 416 VPLRTDDGVPVGLCLVGPHGRDRDVLAVVAGLGGS 450
>gi|83943390|ref|ZP_00955849.1| amidase [Sulfitobacter sp. EE-36]
gi|83845622|gb|EAP83500.1| amidase [Sulfitobacter sp. EE-36]
Length = 401
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 191/398 (47%), Gaps = 31/398 (7%)
Query: 51 PPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGK 110
P + PL+GL+ AV DLFD+ G VT G + S A + + V+ L GA +G
Sbjct: 28 PVEGEGPLSGLNVAVKDLFDVRGQVTRAGS-LVRKDASPAIKDAVTVARLRGAGAGLVGH 86
Query: 111 TVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFAYS G N HY TP P + GGS+SG A AVA + D +LG DT G R+
Sbjct: 87 ANMTEFAYSGLGLNPHYGTPLTPLKEGCIAGGSTSGGASAVARGVADIALGTDTGGSARI 146
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+AFCG+ GF+ + +S G +P+S SLD+VG RD +LR V +VL P A +P
Sbjct: 147 PAAFCGLFGFKATAQTISREGAVPLSHSLDSVGVLTRDVGLLRPVLNVLRDRPLPASSAP 206
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-LKHENLGEYFDSKVPSLKGFHKT 289
R +I+ ++ F + + + VV + E L V ++ + L + D + + F
Sbjct: 207 RAVIVPEN-FGMDGLDTE-VVDAFEAALEVLRASGVSVRRQTLDFFEDYRALPVWQFSAV 264
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI-RNE 348
E + +H + + + LDP +++ + + T IE ++I E
Sbjct: 265 --------------ESRAHHGAYFDQTRAELDPRVASRMARADGV--TGIEFARTIAARE 308
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSGCCQ 403
A + L D + P+ A PPK + L++D +LL S+A+V C
Sbjct: 309 ALIARADRLFGDTPVALPSVAIMPPK---PDDLNDDATYDRINLLALRNTSLANVIDGCS 365
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
V++P+ D T + A G D L+ + + +L
Sbjct: 366 VSIPI--TDHPGTGLMLTAPAGRDAMLITMAETLQGAL 401
>gi|424815583|ref|ZP_18240734.1| amidase [Escherichia fergusonii ECD227]
gi|325496603|gb|EGC94462.1| amidase [Escherichia fergusonii ECD227]
Length = 373
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 179/380 (47%), Gaps = 39/380 (10%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L FAV D DI G T G P A A + + +V L+ G GKT + E A+ +
Sbjct: 21 LRFAVKDTLDIAGRPTRAGCPALADAPKA-KQHARIVKVLLNSGCQLTGKTTLHELAFGV 79
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N TP NP P+ +PGGSSSG+A VA VDF+LG DT G VR+P+A CG+LG
Sbjct: 80 TGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFALGTDTGGSVRMPAACCGVLGL 139
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P YG +S G++P +SLD VG FAR+P+ILR V L LP A
Sbjct: 140 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILRDV-LTRLALPVDA-------------- 184
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKTNGELKNVMRL 299
L +PA + + + + V E LG +S +P L H+ + N
Sbjct: 185 PLDSLPA---IGFIFAAQPDIDALLVDTLEALGIAANSVTLPLLGEAHRAGLTIINRENW 241
Query: 300 IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKD 359
+ +H A+ PD+++ I I+ + + +++R + + +++LL+D
Sbjct: 242 LAFNALLASH---------AVSPDVASRIQAGESITSDQLASAENVRAQFTAQVNALLED 292
Query: 360 DGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
+L T PP L E +++ R F+L SG +++P+G P
Sbjct: 293 TPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPFNL------SGHPAISLPMGELQGRP 346
Query: 416 TSVSFIARHGGDRFLLDTVQ 435
++ +A G + L+ +
Sbjct: 347 VALQLVAGFGEEGLLVQAAE 366
>gi|440286737|ref|YP_007339502.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Enterobacteriaceae bacterium strain FGI 57]
gi|440046259|gb|AGB77317.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Enterobacteriaceae bacterium strain FGI 57]
Length = 373
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 180/392 (45%), Gaps = 63/392 (16%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L FAV D DI G+ T G P A A + + +V L+ G GKT + E A+ +
Sbjct: 21 LRFAVKDTLDIAGHPTRAGCPALADAPKA-KQHARIVKVLLNSGCQLTGKTTLHELAFGV 79
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N TP NP P+ +PGGSSSG+A VA VDF+LG DT G VR+P+A CG+LG
Sbjct: 80 TGINPWSGTPVNPQYPTLIPGGSSSGSATVVANGDVDFALGTDTGGSVRMPAACCGVLGL 139
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV-GHVLL-------QLP-----FAAQ 227
+P YG +S G++P +SLD VG FAR+P+ILR V V L LP FAAQ
Sbjct: 140 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILREVLARVALPVDAPLESLPAIGFIFAAQ 199
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH 287
+++ D E L I A+ V +P L H
Sbjct: 200 PDIDALLV--DALEALGIAANSV----------------------------TLPLLGEAH 229
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
+ + N + +H A+ PD+++ I I+ + + +++R
Sbjct: 230 RAGLTIINRENWLAFNALLASH---------AVSPDVASRIQAGESITSEQLASAENVRT 280
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQ 403
+ + +++LL++ +L T PP L E +++ R F+L SG
Sbjct: 281 QFTAQVNALLEETPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPFNL------SGHPA 334
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
+++P+G P ++ +A G + L+ +
Sbjct: 335 LSLPMGELQGRPVALQLVAGFGEEGLLVQAAE 366
>gi|336246966|ref|YP_004590676.1| amidase [Enterobacter aerogenes KCTC 2190]
gi|334733022|gb|AEG95397.1| amidase [Enterobacter aerogenes KCTC 2190]
Length = 381
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 178/385 (46%), Gaps = 33/385 (8%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FAV D DI G+ T G P + A R + VV L++ G GKT + E A+ +
Sbjct: 27 LTFAVKDSLDIAGFPTRAGSPVL-QDAPPAVRHAAVVEALLDNGCQLRGKTTLHELAFGV 85
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N H TP NP P +PGGSSSG+A VAA VDF++G DT G VR+P+A CG+ G
Sbjct: 86 TGINPHSGTPRNPHYPQLIPGGSSSGSAAVVAAGEVDFAVGTDTGGSVRMPAACCGVAGL 145
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQRSPRQIIIADD 238
+PS+G +S G++P +SLD VG FARD LR L P A + +P +A
Sbjct: 146 KPSFGRLSRAGVMPTESSLDCVGLFARDIATLRQALAKALGESAPPARRDAPAISYLAGT 205
Query: 239 CF-ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
E+ ++ R+ Q + T L GF++ + V+
Sbjct: 206 ATPEIEQLIVSRLQQAGLAWTRA---------------------ELPGFNEAHQAGLTVI 244
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
F + N P L PD++ I EI + +S+R + +A+ + L
Sbjct: 245 SQENWLAFHSIIN------APNLAPDVARRIHAGAEIGPQQRQAAESVRQQFSAAVDAQL 298
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTS 417
++V PT PP L +E L+ ++SG +++PLG + P +
Sbjct: 299 AKTPLIVLPTLPECPPTL--EEAADPLKVVNLTRLVRPFNLSGHPALSLPLGEINHRPVA 356
Query: 418 VSFIARHGGDRFLLDTVQNMYASLQ 442
+ +A + LL+ + + L+
Sbjct: 357 LQLVANKNKEFDLLNYAEYLLEKLK 381
>gi|218548177|ref|YP_002381968.1| amidase [Escherichia fergusonii ATCC 35469]
gi|218355718|emb|CAQ88330.1| putative amidase [Escherichia fergusonii ATCC 35469]
Length = 376
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 178/380 (46%), Gaps = 39/380 (10%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L FAV D DI G T G P A A + + +V L+ G GKT + E A+ +
Sbjct: 24 LRFAVKDTLDIAGRPTRAGCPALADAPKA-KQHARIVKVLLNSGCQLTGKTTLHELAFGV 82
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N TP NP P+ +PGGSSSG+A VA VDF+LG DT G VR+P+A CG+LG
Sbjct: 83 TGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFALGTDTGGSVRMPAACCGVLGL 142
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P YG +S G++P +SLD VG FAR+P+ILR V L LP A
Sbjct: 143 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILRDV-LTRLALPVDA-------------- 187
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKTNGELKNVMRL 299
L +PA + + + + V E LG +S +P L H+ + N
Sbjct: 188 PLDSLPA---IGFIFAAQPDIDALLVDALEALGIAANSVTLPLLGEAHRAGLTIINRENW 244
Query: 300 IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKD 359
+ +H A+ PD+++ I I+ + + +++R + +++LL+D
Sbjct: 245 LAFNALLASH---------AVSPDVASRIQAGESITSDQLASAENVRVQFTGQVNALLED 295
Query: 360 DGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
+L T PP L E +++ R F+L SG +++P+G P
Sbjct: 296 TPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPFNL------SGHPAISLPMGELQGRP 349
Query: 416 TSVSFIARHGGDRFLLDTVQ 435
++ +A G + L+ +
Sbjct: 350 VALQLVAGFGEEGLLVQAAE 369
>gi|328875581|gb|EGG23945.1| hypothetical protein DFA_06083 [Dictyostelium fasciculatum]
Length = 396
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 191/403 (47%), Gaps = 68/403 (16%)
Query: 61 LSFAVSDLFDIEGYVT-----GFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
L F V D D++GY + F + A+ H+ +V L+ G +GKT + E
Sbjct: 29 LEFGVKDTIDVKGYQSKACCRAFESVDVAKEHAE------IVERLLNAGCRVVGKTNMHE 82
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
AY + G N++ TP N P +PGGSSSG+A AVA + DF+LG DT G VR+P+A
Sbjct: 83 MAYGLTGINEYTGTPDNLKYPGIVPGGSSSGSATAVAHSMCDFALGTDTGGSVRIPAACT 142
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G+ G +P++GAVS +G+ P +SLD VG+FARD + + +VL +L +P+ +
Sbjct: 143 GVFGLKPTHGAVSRIGVHPPHSSLDCVGFFARD---IDTIINVLERL------NPQDL-- 191
Query: 236 ADDCFELL--KIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
D +LL K+P V+ + E++ SK+ SL + NGE
Sbjct: 192 --DAKQLLITKLPKFGVLTGLANV-----------QEDIDNLIKSKLTSLVAAKQANGEG 238
Query: 294 KNVMRLIQRYEFKNNHNEWIES---------------VKPALDPDISAEIGEMLEISETV 338
++ + + N H++ ++ + + PD+++ +G ++ +
Sbjct: 239 GEIVPITLQ---DNTHDQVFQAGVNIIAFENYSAYANILDRVSPDVASRLGHGKNVTSNI 295
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIA-- 396
+ + + R + I LL+ I+ PT PP + E+ N +F ++ ++
Sbjct: 296 LADSEKTRTQFTEQIDQLLQSTPIIALPTLPVLPPTV-------EEVSNGSFQVMQLSRL 348
Query: 397 ----SVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
+V+G +++P G P ++ I G + +L VQ
Sbjct: 349 VRPFNVTGHPAISIPFGEISNRPVALQLITSKGNELYLCKVVQ 391
>gi|422806355|ref|ZP_16854787.1| amidase [Escherichia fergusonii B253]
gi|324112893|gb|EGC06869.1| amidase [Escherichia fergusonii B253]
Length = 373
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 178/380 (46%), Gaps = 39/380 (10%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L FAV D DI G T G P A A + + +V L+ G GKT + E A+ +
Sbjct: 21 LRFAVKDTLDIAGRPTRAGCPALADAPKA-KQHARIVKVLLNSGCQLTGKTTLHELAFGV 79
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N TP NP P+ +PGGSSSG+A VA VDF+LG DT G VR+P+A CG+LG
Sbjct: 80 TGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFALGTDTGGSVRMPAACCGVLGL 139
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P YG +S G++P +SLD VG FAR+P+ILR V L LP A
Sbjct: 140 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILRDV-LTRLALPVDA-------------- 184
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKTNGELKNVMRL 299
L +PA + + + + V E LG +S +P L H+ + N
Sbjct: 185 PLDSLPA---IGFIFAAQPDIDALLVDALEALGIAANSVTLPLLGEAHRAGLTIINRENW 241
Query: 300 IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKD 359
+ +H A+ PD+++ I I+ + + +++R + +++LL+D
Sbjct: 242 LAFNALLASH---------AVSPDVASRIQAGESITSDQLASAENVRVQFTGQVNALLED 292
Query: 360 DGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
+L T PP L E +++ R F+L SG +++P+G P
Sbjct: 293 TPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPFNL------SGHPALSLPMGELQGRP 346
Query: 416 TSVSFIARHGGDRFLLDTVQ 435
++ +A G + L+ +
Sbjct: 347 VALQLVAGFGEEGLLVQAAE 366
>gi|307106615|gb|EFN54860.1| hypothetical protein CHLNCDRAFT_58094 [Chlorella variabilis]
Length = 720
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 159/582 (27%), Positives = 241/582 (41%), Gaps = 74/582 (12%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G + +SD D++ T FG W AAS+T LV GA I +
Sbjct: 119 LAGRTLVLSDRLDVQSLETAFGCQPWKSEQRAASQTYGPADALVAAGAQGIAVVHGEPLG 178
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
TP NPA GG GAA +VAA L D +L +D +G RVP+ CG
Sbjct: 179 LGPLLFLSGAGTP-NPAGKGHTHGGGEYGAAASVAAGLADLALAVDELGSARVPAGCCGA 237
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR--QIII 235
R + G + G S SL A DP++L G L+LP A S + ++
Sbjct: 238 YALRTTAGVLPLEGAAITSRSLAAPALLAADPQLLLKAGQA-LRLPGGAAASTDVLRYLV 296
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--HKTNGEL 293
A+D F ++ V+ + ++ G + +L E+ +V SL F + +
Sbjct: 297 AEDFFAAAGEETRAMMPAVVAAVKRWAGPDQAQALSLCEWLYHRVASLAAFMPDRKKEDA 356
Query: 294 KNVMRLIQR-----------------YEFKNNHNEWIESVKPALDPDISAEIGEMLEISE 336
M QR +EF + W+E+ + L+P + E + E
Sbjct: 357 AAGMEKQQRAEQVLQALAAAAEVVRQWEFVQAYGAWVEAHQSQLEPSVVLYWQEAQLVDE 416
Query: 337 TVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF------ 390
+ +++ E+++A+ + L D I V PTT P P + + +A
Sbjct: 417 GLYSKARALAAELQAAMRASLMDGYIFVLPTTPGPAPPAAAGAGGASGGEAQAAQAFRAR 476
Query: 391 --SLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQA--- 445
++A++SG QV +PL P SVS +A H D LL + L ++A
Sbjct: 477 CAQFAAVAALSGVPQVVLPLPVPGGMPLSVSLLALHKRDLVLLQAAAKLGPMLADEAAAL 536
Query: 446 ----------------------------DIATKSKLSTNTFNQKQSAEIA---------- 467
D K S+ +++ A+ A
Sbjct: 537 VAERNNGDQPWWRPQAPAPAEAAATATGDGGKKPAGSSRANGRRKKADSALDAATAAAEA 596
Query: 468 -KEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAIN 526
KE GN A++ ++ A+ Y AI+L A Y++NRA AYL+ GS+ AEADC A+
Sbjct: 597 FKEDGNAAFRAGRYDDAVRQYGAAIQLRPQAAVYHANRAMAYLKLGSYGAAEADCDAALK 656
Query: 527 LDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 568
L+ + KA LRRG+AR G A DF L LEP N++A
Sbjct: 657 LE-LSAKALLRRGSARLAQGNADGAKADFRQVLALEPQNRQA 697
>gi|302832303|ref|XP_002947716.1| hypothetical protein VOLCADRAFT_116484 [Volvox carteri f.
nagariensis]
gi|300267064|gb|EFJ51249.1| hypothetical protein VOLCADRAFT_116484 [Volvox carteri f.
nagariensis]
Length = 308
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 145/296 (48%), Gaps = 9/296 (3%)
Query: 149 VAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
VAVA VD LG DT G +RVP++FCG+LG RP++G V+ G ++ S T GWFARD
Sbjct: 18 VAVACGDVDIGLGTDTGGSIRVPASFCGLLGIRPTWGRVARCGTTALAPSFTTPGWFARD 77
Query: 209 PKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLK 268
P +LR VG VLL + ++A D F L P + + + + F + V
Sbjct: 78 PAVLRAVGAVLLDPSSRGSSRLGRWLVAKDAFALADPPTGKAIYDTLSAQ---FPKVV-- 132
Query: 269 HENLGEYFDSKVPS-LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAE 327
+ LG+ + +V + L G + G + M + + +E H W+ + P P I
Sbjct: 133 -QLLGQPLEVEVAAPLSG--EGLGTFVDWMGVFRGFEVWQEHAAWVSAHNPEFGPGIKER 189
Query: 328 IGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN 387
+++ E + R +RS + LL DG+LV PTT P P + + ++
Sbjct: 190 FAMAAAVTKEQHEVGSAKRRRIRSHLLELLGSDGLLVVPTTPGPAPPVNTPPADLDAWRT 249
Query: 388 RAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
R SL SIA ++G QV++P+ D P + I G D LL+ +++ + +
Sbjct: 250 RLISLTSIAGLAGLPQVSLPIARVDGLPVGLGLIGPPGSDEALLEITEHLMGVIAQ 305
>gi|406989082|gb|EKE08899.1| hypothetical protein ACD_16C00238G0004 [uncultured bacterium]
Length = 399
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 188/375 (50%), Gaps = 27/375 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G FAV D+FD++G+ T G+P++ + + +T+ V+ L E GA +GKT DE
Sbjct: 27 LKGYRFAVKDVFDVKGFRTQAGNPDYFAQIAPSVKTAQAVTILQEAGAILVGKTHTDELG 86
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
S+ G N+HY P N +P+ +PGGSSSG+A AVAA+L+DF+LG DT G VR P++FCGI
Sbjct: 87 GSLFGLNEHYGPPINSYSPNCVPGGSSSGSAAAVAANLIDFALGADTSGSVRAPASFCGI 146
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQR--SPRQII- 234
G RP++ + G++PIS LDTVG FAR P I + VL QR S +II
Sbjct: 147 YGLRPTFDRIPTTGVLPISPHLDTVGVFARHPDI---IAQVLDVYGIKEQREFSRLRIIP 203
Query: 235 -IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+ + E LK + Q EKL Q L + D +T +
Sbjct: 204 YLVNSLEETLK----QSFQ------EKLTEFQGLTSSSSPFILD---------EETLTQW 244
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
V+R I Y N H +WI P IS + IS + + E+++ +
Sbjct: 245 STVIRTIAMYGLWNVHKDWILKTTPTFGKLISERLKLASSISTEEYKRALLQQKEIQTFM 304
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD- 412
L+ + ++V PT P L +D+ + +A++SG ++T+PL +
Sbjct: 305 DDGLEPEDVVVFPTVHDIAPLLSSSLSHLKDFALKTSRHTCVAALSGFPEITLPLRNVNI 364
Query: 413 KCPTSVSFIARHGGD 427
+ +SF+ + G D
Sbjct: 365 RGCFGMSFLGKAGED 379
>gi|308804720|ref|XP_003079672.1| amidase family protein (ISS) [Ostreococcus tauri]
gi|116058128|emb|CAL53317.1| amidase family protein (ISS) [Ostreococcus tauri]
Length = 447
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 205/439 (46%), Gaps = 40/439 (9%)
Query: 26 LKKNIKQDFGAFIEKLQLLPPPQPLPPKAPH-PLTGLSFAVSDLFDIEGYVTGFGHPEW- 83
++ + D F+E + P H L G+ AV D D+ G G G+P +
Sbjct: 1 MRTTGRDDANCFVENPRAGETTNADVPGGAHGALRGMRVAVKDNVDVRGMRAGAGNPTYL 60
Query: 84 -ARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAA--PSQMP 140
R A+ + V ++ GA +GKT +DE A+S+ G N HY TPTN P ++P
Sbjct: 61 ETRGREPATAHAPCVDKVLAAGARFVGKTHMDELAWSLQGENFHYGTPTNARGKIPGRIP 120
Query: 141 GGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLD 200
GGSSSG+A AV D ++G DT+G VR+P++FCG+ G RP++G V G++P+S S D
Sbjct: 121 GGSSSGSASAVCCGHADVAIGTDTIGSVRLPASFCGVYGARPTHGRVDATGVVPLSHSFD 180
Query: 201 TVGWFARDPKILRHVGHVLL-----QLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVI 255
TVGWF +D K LR +G +LL +A+ ++ D F L+ PA + +
Sbjct: 181 TVGWFTKDAKTLRVMGEILLDPETRDAETSAKIGRGRLAACSDAFRLVD-PAVKQAMNAV 239
Query: 256 KSTEKLFGRQVLKHENLGEYFDSK-----VPSLKGFHKTNG--------ELKNVMRLIQR 302
S+E + ++V K D+ V S +G E R+IQ
Sbjct: 240 LSSEGV--KRVFKDARGDAMPDAMGIVHLVLSDLALTDKSGERVLPPITEWSETFRVIQT 297
Query: 303 YEFKNNHNEWIESVKPALDPDI-----SAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
E + H WI+ KP P I +AEIG + +++ ++R + + + +LL
Sbjct: 298 REVWDAHGGWIKEHKPVFGPGIRDRFRAAEIG----VDAATMDHHVALRERITNHLDALL 353
Query: 358 KDDGILV---TPTTAYPPPKLGGKEMLSEDYQNR--AFSLLSIASVSGCCQVTVPLGYYD 412
D IL+ A + L + + R A +L + AS++ V +P +
Sbjct: 354 ADGTILILPAARGPAPAATDYNSEASLKKLAEARSVALALGAPASLARLPCVVIPAVEIE 413
Query: 413 KCPTSVSFIARHGGDRFLL 431
P + ++R G D LL
Sbjct: 414 GEPVGLMLMSRRGTDEALL 432
>gi|404215136|ref|YP_006669331.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Gordonia sp. KTR9]
gi|403645935|gb|AFR49175.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Gordonia sp. KTR9]
Length = 404
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 177/358 (49%), Gaps = 30/358 (8%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G S AV DL+ I+G+ G G+ +W R + T+ V+ L+ GA+ G + DEFA
Sbjct: 43 LQGKSVAVKDLYTIKGHRVGAGNEQWLRESQPSRTTARSVAALLAAGASVAGISRTDEFA 102
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ GTN HY TP NP A +++PGGSSSG+A AVA LG DT G +R+PS++ G+
Sbjct: 103 YSLAGTNGHYGTPPNPKASNRIPGGSSSGSASAVALGQATIGLGTDTGGSIRIPSSYQGL 162
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G R ++GAVS G++P++ S DTVGW R L VL +P R I +D
Sbjct: 163 YGIRTTHGAVSRDGLLPLAPSFDTVGWMTRSRADLVATTSVL--MPGLPSRVDFPITYSD 220
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSL--KGFHKTNGELKN 295
D +L A V +++ K G Q+ FD+ V L K F G
Sbjct: 221 DIIDL----ASPDVAAAVRAGIKRLGSQMPLRA---IRFDTAVLPLWVKAFQTRQG---- 269
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
+E H EW+ +L+PD+ + +++ + + R+ I+S
Sbjct: 270 -------WEAWRAHGEWVSRHWDSLNPDVRSRFETASKVTASDLAAADRTLATARNRINS 322
Query: 356 LLKDDGILVTPTTAYPPPK-----LGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
L + IL+ P+ + P LGG + ED + R F L +A ++G V+ PL
Sbjct: 323 ALGET-ILLLPSASSTAPTRASAALGGSVI--EDTRARTFQLTCLAGITGRPAVSNPL 377
>gi|72161974|ref|YP_289631.1| hypothetical protein Tfu_1572 [Thermobifida fusca YX]
gi|71915706|gb|AAZ55608.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 408
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 180/384 (46%), Gaps = 24/384 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G AV DLF + GY G G+P W + + V L+ GA +G EFA
Sbjct: 44 LSGFRVAVKDLFAVAGYAIGAGNPTWLHEAPVETDHAPAVRALLHAGADIVGIVQTAEFA 103
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y + G N+HY TP NPA+P ++PGGSSSG+A AVA L D LG DT G +R+P+++CG+
Sbjct: 104 YGLTGINQHYGTPPNPASPGRVPGGSSSGSASAVALGLADIGLGSDTAGSIRIPASYCGL 163
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP---RQII 234
RP++G V G I ++ SLDTVGW R P++L V VLL QRS R+++
Sbjct: 164 CSLRPTHGMVPTAGSIGLAPSLDTVGWITRTPRLLNRVSDVLLP-----QRSAPPIRRLL 218
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+A D F+L++ PA R +++ + + L V S H E
Sbjct: 219 LAVDLFDLVE-PAVR--DMLVDEAHEWAQQTGLPLH--------PVDSTCAAHLE--EWA 265
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
+ +IQ E H W+ A+ ++ I I E +E + R ++
Sbjct: 266 EAVGIIQAVEMWQTHGRWLREHAGAVSSLVADAIAAGEAIPEDYLEWAQETACRGRRLLA 325
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSE-DYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
L+ LV P ++ +S+ D + AS++G +T+P
Sbjct: 326 ELVPPGTALVQPAAPT--TPPPPEQAMSDLDLLTTTVMFVCAASMAGLPVLTLPGVRTSA 383
Query: 414 CPTSVSFIARHGGDRFLLDTVQNM 437
P +S +A G DR L V +
Sbjct: 384 GPIGLSLLAAAGSDRALSALVAEL 407
>gi|359400155|ref|ZP_09193145.1| amidase [Novosphingobium pentaromativorans US6-1]
gi|357598478|gb|EHJ60206.1| amidase [Novosphingobium pentaromativorans US6-1]
Length = 400
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 177/382 (46%), Gaps = 19/382 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G + DLF + GY G G+P W + + V ++ GA IG DE A
Sbjct: 31 LAGSQTVIKDLFAVAGYGIGAGNPTWLEQAPVETANAWAVQQWLDAGADVIGIAHTDELA 90
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
S++GTN HY TP N AP ++PGGSSSG+A AVAA LV +++ DT G RVP+++CGI
Sbjct: 91 LSLSGTNVHYGTPLNTRAPGRIPGGSSSGSAAAVAAGLVPYAMATDTGGSTRVPASYCGI 150
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL-RHVGHVLLQLPFAAQRSPRQIIIA 236
G R ++G V G++P++ D VG A L R G +L FA + + R +++A
Sbjct: 151 FGIRTTHGRVPVDGLVPLAPRFDAVGVLASSGAWLARATGPLLPD--FAEKPAARCLVVA 208
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D L A V +K+ K + ++ + D ++ E K+
Sbjct: 209 TDVLALADRNAADAVDDAVKAVAKHLDIETVRT----SFADGRLQ----------EWKDA 254
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE-MRSAISS 355
Q E H EWIE KP P I EM ++ N + E + +A
Sbjct: 255 FLARQPVEVWKTHGEWIEGNKPKFGPGIGLRF-EMASKADPARANLADMAAEQILAAFEK 313
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
+ G+L T + P+L + ++R ++ IA ++G V++P+ + P
Sbjct: 314 HVPPGGVLAFATASGAAPQLELPAPEKQSLRDRTIAMTCIAGLAGLPAVSLPVASVEGLP 373
Query: 416 TSVSFIARHGGDRFLLDTVQNM 437
+ +AR G D LL T +
Sbjct: 374 LGLCLLARRGEDETLLATAAAL 395
>gi|306841125|ref|ZP_07473843.1| amidase [Brucella sp. BO2]
gi|306288846|gb|EFM60160.1| amidase [Brucella sp. BO2]
Length = 337
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 173/357 (48%), Gaps = 41/357 (11%)
Query: 97 VSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLV 156
+ L+ GA IGK DE A+S+ G N HY P NPAAP ++ GGSSSG+A AVA L
Sbjct: 1 MEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLA 60
Query: 157 DFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVG 216
D +LG DT G +R P++FCG++G R ++G + GI+P++ SLDT+GWFARD + VG
Sbjct: 61 DIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVG 120
Query: 217 HVLLQLPFAAQRSPRQIIIADDCFE-----LLKIPADRVVQVVIKSTEK-----LFGRQV 266
VLL DD E LL +P + Q+++ E +F +
Sbjct: 121 AVLL---------------GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFAKVR 163
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
NL + P+L + EL R IQ E NH WI S L P I+
Sbjct: 164 PHFTNLKA---ASQPTL-----SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIAD 215
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ 386
E++ +++N ++ R +++ + +L PT P G + Y+
Sbjct: 216 RFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYR 275
Query: 387 NRAFSLLSIASVSGCCQVTVPL------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+A LL ++ +SG Q+T+PL G P +SFI G DR L+ Q +
Sbjct: 276 EQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 332
>gi|419961071|ref|ZP_14477080.1| amidase [Rhodococcus opacus M213]
gi|414573392|gb|EKT84076.1| amidase [Rhodococcus opacus M213]
Length = 454
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 174/392 (44%), Gaps = 27/392 (6%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G AV+DL+ + G G G + T+ VV+ L+ GA +G
Sbjct: 77 PTGDGPLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
D+ Y +G N+ + TP NP A +PGG++SGAA AVA D LG+DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIP 196
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+++ G+ GF PS GAVS G+ P+S + DT W D L V L LP A+ R
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGAL--LPLTAETPFR 254
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ +D + + A V+ + + EK S +P L G
Sbjct: 255 SALTSDGINAVAEAGALGAVRRALTAWEK-----------------SSLPRLTWTDTDIG 297
Query: 292 ELK---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L + + +Q YE H +W+ +L + I E+ E
Sbjct: 298 RLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWESTYGRKLIKLAE 357
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN--RAFSLLS-IASVSGCCQVT 405
I++ + D +L+ T++ P + + ++N RA +L+ +AS+SG T
Sbjct: 358 ASQTITAYVGDSLLLLPATSSTAPERT--SYPSGDRFRNTMRATGMLTCLASISGLPNAT 415
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
VPL D P + + HG DR +L V ++
Sbjct: 416 VPLRTDDGVPVGLCLVGPHGRDRDVLAVVASL 447
>gi|222834269|gb|EEE72746.1| amidase family protein [Populus trichocarpa]
Length = 175
Score = 149 bits (375), Expect = 6e-33, Method: Composition-based stats.
Identities = 83/175 (47%), Positives = 108/175 (61%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P P+P A PL GL+FAV DLFD+ GY TG G+P + T+ V L++ GA
Sbjct: 1 PDAPVPNAANGPLRGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLLDAGA 60
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GK DE A+S+NG N HY P N AAP ++ GGSSSG+A AV+ L DF+LG DT
Sbjct: 61 AFVGKVHTDELAFSMNGQNHHYGGPYNGAAPDRITGGSSSGSASAVSNKLCDFALGTDTG 120
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL 220
G VR P++ CG+ G RPS+G +S +P+ +LDT G+FARD V VLL
Sbjct: 121 GSVRAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLL 175
>gi|384100035|ref|ZP_10001102.1| amidase [Rhodococcus imtechensis RKJ300]
gi|383842413|gb|EID81680.1| amidase [Rhodococcus imtechensis RKJ300]
Length = 454
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 174/392 (44%), Gaps = 27/392 (6%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G AV+DL+ + G G G + T+ VV+ L+ GA +G
Sbjct: 77 PTGDGPLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
D+ Y +G N+ + TP NP A +PGG++SGAA AVA D LG+DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIP 196
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+++ G+ GF PS GAVS G+ P+S + DT W D L V L LP A+ R
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGAL--LPLTAETPFR 254
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ +D + + A V+ + + EK S +P L G
Sbjct: 255 SALTSDGINAVAEAGALGAVRRALTAWEK-----------------SSLPRLTWTDTDIG 297
Query: 292 ELK---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L + + +Q YE H +W+ +L + I E+ E
Sbjct: 298 RLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWESTYGRKLIKLAE 357
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN--RAFSLLS-IASVSGCCQVT 405
I++ + D +L+ T++ P + + ++N RA +L+ +AS+SG T
Sbjct: 358 ASQTITAYVGDSLLLLPATSSTAPERT--SYPSGDRFRNTMRATGMLTCLASISGLPNAT 415
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
VPL D P + + HG DR +L V ++
Sbjct: 416 VPLRTDDGVPVGLCLVGPHGRDRDVLAVVASL 447
>gi|119946560|ref|YP_944240.1| amidase [Psychromonas ingrahamii 37]
gi|119865164|gb|ABM04641.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Psychromonas ingrahamii 37]
Length = 411
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 182/399 (45%), Gaps = 15/399 (3%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G F D+FD++GYVTG G+P W +H A TS +++ L+ GA C G+ E A
Sbjct: 23 LSGYRFVFKDVFDVQGYVTGAGNPTWLMSHEPALHTSPIITQLLIQGAHCSGRVQSSELA 82
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+G N HY T N AP GGSSS +A D DF+LGID G +R+ +++CG+
Sbjct: 83 CGFDGMNTHYGTAINHLAPKCQSGGSSSCSAAVARGD-GDFALGIDAAGEIRISASYCGL 141
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFAAQRSPRQIIIA 236
G R +Y A+ ++ S DT G R+ ++ +V L + P Q I +
Sbjct: 142 FGLRATYAALPLDHSFSLAKSFDTAGLLTRNLTVMSNVVTSLFREQPPVDQFEDVFIFVE 201
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
EL+ ++ K R V+ ++L D SL+ EL
Sbjct: 202 KRALELMDSEVKE--ELTNKLNRLARNRYVVSTDSL---LDICEVSLE-------ELAEW 249
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEIS-ETVIENCKSIRNEMRSAISS 355
+IQ YE H+EW+ + A+ D+S + IS + +E + + N I
Sbjct: 250 FSIIQGYELIQEHSEWLAEHQSAVTKDVSRRFDKSKNISIDEYVEAKQKMANFSTLFIYL 309
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
L G L PTT PP+L Y+ R L ++AS+ G Q+ +PLG +
Sbjct: 310 LKSKGGWLCLPTTPGLPPELKQSVNSLIYYRKRLLGLTALASLCGLPQLHLPLGKINGKS 369
Query: 416 TSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLS 454
+S I ++ L+ Q + SL + +KS L+
Sbjct: 370 YGLSLIGMPNSEKKLIKQGQYLLQSLAVNESVNSKSWLN 408
>gi|432336008|ref|ZP_19587549.1| amidase [Rhodococcus wratislaviensis IFP 2016]
gi|430777076|gb|ELB92458.1| amidase [Rhodococcus wratislaviensis IFP 2016]
Length = 454
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 174/392 (44%), Gaps = 27/392 (6%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G AV+DL+ + G G G + T+ VV+ L+ GA +G
Sbjct: 77 PTGDGPLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
D+ Y +G N+ + TP NP A +PGG++SGAA AVA D LG+DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIP 196
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+++ G+ GF PS GAVS G+ P+S + DT W D L V L LP A+ R
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGAL--LPLTAETPFR 254
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ +D + + A V+ + + EK S +P L G
Sbjct: 255 SALTSDGINGVAEAGALGAVRRALTAWEK-----------------SSLPRLTWTDTDIG 297
Query: 292 ELK---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L + + +Q YE H +W+ +L + I E+ E
Sbjct: 298 RLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWESTYGRKLIKLAE 357
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN--RAFSLLS-IASVSGCCQVT 405
I++ + D +L+ T++ P + + ++N RA +L+ +AS+SG T
Sbjct: 358 ASQTITAYVGDSLLLLPATSSTAPERT--SYPSGDRFRNTMRATGMLTCLASISGLPNAT 415
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
VPL D P + + HG DR +L V ++
Sbjct: 416 VPLRTDDGVPVGLCLVGPHGRDRDVLAVVASL 447
>gi|147782193|emb|CAN72047.1| hypothetical protein VITISV_002654 [Vitis vinifera]
Length = 200
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 116/180 (64%), Gaps = 23/180 (12%)
Query: 9 WVLLGLGLAGILLMTKKLKKN------IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLS 62
W+++ G+AGI+++ + ++ ++ GAF+E+ +LLP PQP PP + L+G
Sbjct: 20 WIVIAAGVAGIVILVETRRRKRRAALLTREGLGAFVERFELLPFPQPPPPASRLLLSGFK 79
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS--- 119
FAV+D+FD++GYVTGFG W RTH A++T+ V+ L++ GATC+GKTV+DE ++
Sbjct: 80 FAVTDIFDVKGYVTGFGSTSWKRTHEEATKTAVAVTALLKNGATCVGKTVLDELSFGFVV 139
Query: 120 --------------INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
I G N + +P NP PS +PGGSSSG+AVAVA+ LVDF++GID +
Sbjct: 140 YFSFDFTCVFEIKRITGENMDFGSPANPVLPSHIPGGSSSGSAVAVASQLVDFAIGIDKI 199
>gi|313679128|ref|YP_004056867.1| amidase [Oceanithermus profundus DSM 14977]
gi|313151843|gb|ADR35694.1| Amidase [Oceanithermus profundus DSM 14977]
Length = 441
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 167/370 (45%), Gaps = 44/370 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ G+ V DL D+ G VT G AR A+ + V L GA +GK+ ++E
Sbjct: 62 PVDGVPVLVKDLLDVTGTVTAAGSAVLARLRPPAASDAPAVRNLQRAGAVVVGKSQLNEL 121
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N H+ TP N P +PGGSSSG+AVAVA LV ++G DT G VR+P+AF G
Sbjct: 122 AFSGLGLNPHFGTPQNALNPDWVPGGSSSGSAVAVARGLVPLAVGTDTGGSVRIPAAFNG 181
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL------PFAAQRSP 230
++GF+PS+G +S G+ P++ SLDTVG AR + L L P A P
Sbjct: 182 LVGFKPSWGRISTRGVTPLAVSLDTVGPLARR---VEDAWAFFLALAGEPHRPLARPSGP 238
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
++++ D E + + F R + + E G + + L G
Sbjct: 239 PRLLVPADLLERAR-----------PEVQGAFERALARLEAAGARLERR--PLPG----- 280
Query: 291 GELKNVMRLIQRYEFKNNHN---EW---IESVKPALDPDISAEIGEMLEISETVIENCKS 344
L V L +RY H W I A+DP + + +L ++E +
Sbjct: 281 --LAEVYDLYRRYGALAAHEAYARWRGLIAEHGAAMDPRV---VRRVLAVAERPSVHHVQ 335
Query: 345 IRNEMRSAISSL---LKDDGILVTPTTAYPPPKLGGKEMLSEDY---QNRAFSLLSIASV 398
+R E + + L+ LV PT PPP L E E + +R + + +
Sbjct: 336 LRRERARRVPAFWAGLRGTDALVLPTAPVPPPLLAEVEASEEAFFRANDRVLAYTMLFNF 395
Query: 399 SGCCQVTVPL 408
V++PL
Sbjct: 396 YAGPAVSLPL 405
>gi|444354921|ref|YP_007391065.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidases [Enterobacter aerogenes EA1509E]
gi|443905751|emb|CCG33525.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidases [Enterobacter aerogenes EA1509E]
Length = 381
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 175/382 (45%), Gaps = 27/382 (7%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FAV D DI G+ T G P + A R + VV L++ G GKT + E A+ +
Sbjct: 27 LTFAVKDSLDIAGFPTRAGSPVL-QDAPPAVRHAAVVEALLDNGCQLRGKTTLHELAFGV 85
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N H TP N P +PGGSSSG+A VAA VDF++G DT G VR+P+A CG++G
Sbjct: 86 TGINPHSGTPRNTHYPQLIPGGSSSGSAAVVAAGEVDFAVGTDTGGSVRMPAACCGVVGL 145
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+PS+G +S G++P +SLD VG FARD LR L A S A
Sbjct: 146 KPSFGRLSRAGVMPTESSLDCVGLFARDIATLRQA------LAKALGESAPPARRAAPAI 199
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLI 300
L A ++ +I S + G + E L GF++ + V+
Sbjct: 200 SYLAGTATPEIEQLIVSRLQQAGLAWTRAE------------LPGFNEAHQAGLTVISQE 247
Query: 301 QRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
F + N P L PD++ I EI + +S+R + + + + L
Sbjct: 248 NWLAFHSIIN------APNLAPDVARRIRAGAEIGPQQRQAAESVRQQFSATVDAQLAKT 301
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSF 420
+++ PT PP L +E L+ ++SG +++PLG + P ++
Sbjct: 302 PLILLPTLPECPPTL--EEAADPLKVVNLTRLVRPFNLSGHPALSLPLGEINHRPVALQL 359
Query: 421 IARHGGDRFLLDTVQNMYASLQ 442
+A + LL+ + + L+
Sbjct: 360 VANKNKEFDLLNYAEYLLEKLK 381
>gi|418532957|ref|ZP_13098850.1| amidase [Comamonas testosteroni ATCC 11996]
gi|371450017|gb|EHN63076.1| amidase [Comamonas testosteroni ATCC 11996]
Length = 417
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 188/421 (44%), Gaps = 25/421 (5%)
Query: 35 GAFI-EKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
GAF+ E PP P + L G+ V D+F ++G G G P W A +
Sbjct: 19 GAFVREGFGTAPPFTP----TGNALAGMRMGVKDIFLVQGQRMGGGTPAWGAQQPIAQES 74
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+ V +E GA IGKTV DE AYS+ G N HY P N AP ++PGGSSSG+A AV+A
Sbjct: 75 APAVQLCLEAGAHWIGKTVTDELAYSLAGINHHYGMPYNAGAPGRLPGGSSSGSAAAVSA 134
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
VDF+LG D G R+P+++CGI G R + G + G ++ S DTVGWFA+ + +
Sbjct: 135 GDVDFALGTDAGGSCRLPASYCGIWGIRTTQGRLPGGG-FKLAPSFDTVGWFAKSGEDMA 193
Query: 214 HVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG 273
+ V+ + QI++ +D + D V+ + + G G
Sbjct: 194 RIHAVIDNEAVHEAQPDLQILLFEDALHV----CDPDVRTMFMDDLQRLGLN-------G 242
Query: 274 EYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE 333
++ + L + + + R++ E + H +W+ + AL D+ A G +
Sbjct: 243 QWLPAGELPLAHWAQAH-------RILAGAETWSIHGDWVTAHGAALGADVRARFGFASQ 295
Query: 334 ISETVIENCKSIRNEMRSAISSLLKDDGILV-TPTTAYPPPKLGGKEMLSEDYQNRAFSL 392
++ + +++R+ + L D G V PT P P + + A L
Sbjct: 296 AAQEDLAVWQALRDAATRMLDKLFADTGAFVLLPTVPGPAPMRDTAAHELQRMREMAQQL 355
Query: 393 LSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSK 452
L IA ++G QV+ P D P +S I D +L + + + A K
Sbjct: 356 LCIAGLAGLPQVSFPWRNVDGAPVGMSVIGPRDADAQVLAAAIDCHKRMTTDIPAAAKDA 415
Query: 453 L 453
+
Sbjct: 416 I 416
>gi|392941923|ref|ZP_10307565.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Frankia sp. QA3]
gi|392285217|gb|EIV91241.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Frankia sp. QA3]
Length = 424
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 151/358 (42%), Gaps = 19/358 (5%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
L P PL GL AV DLF + GY G G+P W + V L GA G
Sbjct: 20 LAPTGSGPLDGLRVAVKDLFAVGGYRIGAGNPRWLAEAPVEPADAEAVRALRAAGAAIAG 79
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
DE A+S++G N HY TP NPAAP ++ GGSSSG A AVAA D LG DT G +R
Sbjct: 80 IAQTDELAFSLSGANVHYGTPPNPAAPDRVTGGSSSGPASAVAAGWADVGLGTDTAGSIR 139
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
VP++ CG+ G RP+ GAV+ G++ ++ S DTVGW DP +LR VG VLL +
Sbjct: 140 VPASVCGLYGLRPTRGAVAAGGVLGLAPSFDTVGWLTADPGLLRAVGEVLLP---PSAPP 196
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
L+ +PA ++ G L + E D VP
Sbjct: 197 GPPGPPGPPARLLVAVPA---AGTALRRLADALGAD-LDAGPVRELDD--VP-------- 242
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
L R +Q E H WI + AL D+ A + + +
Sbjct: 243 --RLLAAFRAVQAAEAWRLHGAWIGAHPGALGADVEARFRFGAGVDADAERDARREIAAG 300
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVP 407
R + L D L P A P G E + ++ +AS G VP
Sbjct: 301 RERLLDRLGADTWLALPAAAGPGHLRGSGERDRDTWRQATLGCTVVASAYGLPSCVVP 358
>gi|423686252|ref|ZP_17661060.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
SR5]
gi|371494320|gb|EHN69918.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
SR5]
Length = 387
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 175/373 (46%), Gaps = 23/373 (6%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
F VSD DI+ G G+P W A + V +++ GA +GKT +DEF + ++G
Sbjct: 28 FVVSDCIDIKNTPNGQGNPTWLLEQKKAKENAPAVDLILKKGAIFVGKTQMDEFGFGLHG 87
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY N + + GGSSSGA AV D LGID GG+RVP+ + G+ GF+
Sbjct: 88 HNPHYGPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGLYGFKA 147
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S AV+ GI I+ ++GW A++ +R V VL P + + +I++ D F
Sbjct: 148 SASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVL--TPMSPLVTVERIVVLDSLFAD 205
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP-SLKGFHKTNGELKNVMRLIQ 301
+ A ++ +IKS+ +V++ +++ + +K S K T G L+N+
Sbjct: 206 IPEEAKTKLETLIKSSP----YEVIRSKSISKIITTKAAESFKVLSATRG-LRNL----- 255
Query: 302 RYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDG 361
W E K A+ +I ++ + + R + S + S+L +
Sbjct: 256 --------ELWYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQRELVISVLESILDEKT 307
Query: 362 ILVTPTTA-YPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSF 420
+L+ PTTA PP E L + + S+AS++ Q+ +P + P +S
Sbjct: 308 LLLMPTTANIAPPTTATDEQLYK-LNAQILKYTSLASLADLPQLHLPWFTVNDSPWGISL 366
Query: 421 IARHGGDRFLLDT 433
+ + G DR L+D
Sbjct: 367 VGQKGMDRQLIDV 379
>gi|298717184|ref|YP_003729826.1| amidase [Pantoea vagans C9-1]
gi|298361373|gb|ADI78154.1| amidase [Pantoea vagans C9-1]
Length = 443
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 174/380 (45%), Gaps = 20/380 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD++G VT G A A + S VV L+ GA +GKT + EFA
Sbjct: 64 IDGLPVSIKDLFDVQGEVTTAGSRLLADAPVAVANAS-VVDKLLLAGAAIVGKTTMTEFA 122
Query: 118 YSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP Q +PGGSSSGAAVAVA + ++G DT G VR+P+A C
Sbjct: 123 FSGLGINPHYGTPVNPWQREQQRIPGGSSSGAAVAVAEGMCLGAVGTDTGGSVRIPAALC 182
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G+ GF+P+ ++ G +P+STSLD++G A D + + ++ P Q +
Sbjct: 183 GLAGFKPTAERINQRGTLPLSTSLDSIGVIADDVRSCWLLDSIIADRPLDLQ-------L 235
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE-YFDSKVPSLKGFHKTNGELK 294
D +P RV+ + + + + + + G D +P L + N
Sbjct: 236 LDLRNARFAVPQTRVLDGLDQHVAQAWQHAITLLKQAGATVIDVTLPELDELNAMNARGG 295
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
I YE H + +++ A DP + A I ++ R + I+
Sbjct: 296 -----ITAYEAWQWHKKTVQAQPEAYDPQVLARIQRGSHLTGQDAIELYQQRAAWQQRIN 350
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPLGYY 411
+ L D L+ PT P + ++ Y S+L SI ++ C +++P
Sbjct: 351 AALSDFDALLMPTVPLVAPTIASLND-AQRYMEINASMLRNPSIINMLDGCALSLPCHRP 409
Query: 412 DKCPTSVSFIARHGGDRFLL 431
P +S + HG D L+
Sbjct: 410 GSAPVGLSLASIHGDDASLI 429
>gi|59712093|ref|YP_204869.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
ES114]
gi|59480194|gb|AAW85981.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
ES114]
Length = 387
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 173/372 (46%), Gaps = 21/372 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
F VSD DI+ G G+P W A + V +++ GA +GKT +DEF + ++G
Sbjct: 28 FVVSDCIDIKNTPNGQGNPTWLLEQRKARENAPAVDLILKKGAIFVGKTQMDEFGFGLHG 87
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY N + + GGSSSGA AV D LGID GG+RVP+ + G+ GF+
Sbjct: 88 HNPHYGPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGLYGFKA 147
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S AV+ GI I+ ++GW A++ +R V VL P + + +I++ D F
Sbjct: 148 SASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVL--TPMSPLVTVERIVVLDSLFAD 205
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP-SLKGFHKTNGELKNVMRLIQ 301
+ A ++ +IKS+ +V++ +++ + +K S K T G L+N+
Sbjct: 206 IPEEAKTKLETLIKSSP----YEVIRSKSISKIITTKAAESFKVLSATRG-LRNL----- 255
Query: 302 RYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDG 361
W E K A+ +I ++ + + R + S + S+L +
Sbjct: 256 --------ELWYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQRELVISVLESILDEKT 307
Query: 362 ILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFI 421
+L+ PTTA P + + + S+AS++ Q+ +P + P +S +
Sbjct: 308 LLLMPTTANIAPPITATDEQLYKLNAQILKYTSLASLADLPQLHLPWFTVNDSPWGISLV 367
Query: 422 ARHGGDRFLLDT 433
+ G DR L+D
Sbjct: 368 GQKGMDRQLIDV 379
>gi|325676656|ref|ZP_08156332.1| amidase [Rhodococcus equi ATCC 33707]
gi|325552546|gb|EGD22232.1| amidase [Rhodococcus equi ATCC 33707]
Length = 446
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 181/396 (45%), Gaps = 31/396 (7%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+P P +GL AV+DLF IEG G G+P W + T+ V+ L+ GGAT G
Sbjct: 67 VPATGSGPTSGLRVAVTDLFAIEGQRIGAGNPAWLGQAGTETATADSVARLLAGGATVAG 126
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
F + +G N Y TP N AA ++PGG++SGA+ AVA LG DT G +R
Sbjct: 127 IAQTVGFGFGHSGINTSYGTPPNAAASGRVPGGATSGASTAVARRTATVGLGPDTTGSIR 186
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+P+A+ G+ GF P++GAVS G +P+S + D VGW D L VG LL +
Sbjct: 187 IPAAYQGLYGFGPTHGAVSTAGAMPLSRTFDNVGWVCADAPTLATVGDALLP------SA 240
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKST---EKLFGRQVLKHENLGEYFDSKVPSLKGF 286
P A + L AD VQ +++ K G L E+L + +L +
Sbjct: 241 PEIEFDAAVTWPGLLAVADADVQPAVRAALAQWKRSGLPPLTEEDL------DIAALPDW 294
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
+ + + +Q YE + W+ + ++ + ++S + + +S+
Sbjct: 295 Y-------DAVVAVQGYEAWQQYGGWVSTATGSVTDEARVNFLAASKVSASTYD--RSLA 345
Query: 347 NEMRSA--ISSLLKDDGILVTPTTAYPPPKLG---GKEMLSEDYQNRAFSLLSIASVSGC 401
+ R+A + L +L+ PTT P G L+ + L+++A+V+G
Sbjct: 346 DVRRAAQTVRDFLGSR-VLLLPTTGSAAPSSSDDPGSVHLAATLRTTGL-LITVATVAGL 403
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
TVP+ P +S I G DR +L V +
Sbjct: 404 PVATVPVRSEGGLPVGLSVIGPAGRDRDVLALVGRI 439
>gi|296130614|ref|YP_003637864.1| amidase [Cellulomonas flavigena DSM 20109]
gi|296022429|gb|ADG75665.1| Amidase [Cellulomonas flavigena DSM 20109]
Length = 579
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 161/353 (45%), Gaps = 24/353 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL + AV DL+ + G G G+P W S + V+ L+ GA G T DE
Sbjct: 142 PLARRTVAVKDLYAVAGQRVGAGNPTWLADAPVESEHADAVARLLAAGADVRGVTRTDEL 201
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS+ GTN H TP NP AP ++PGGSSSG+A AVA D LG DT G VRVP+++ G
Sbjct: 202 AYSLAGTNAHSGTPPNPRAPGRVPGGSSSGSAAAVALGQADVGLGTDTGGSVRVPASYQG 261
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF-AAQRSPRQIII 235
+ G R ++GAVS G++P++ + D VGW RD +L VG VLL A RSPR
Sbjct: 262 LYGIRTTHGAVSTRGLVPLAPTFDAVGWLTRDADLLVAVGDVLLPPETDTAPRSPR---- 317
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
L++ + ++ + + +D L +
Sbjct: 318 -------LRVSPALLAHAQGDVAARVAVFAADAGATVTDTWDGV--DLAAW-------AE 361
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
V R+ Q +E H W+ + AL PD++ I + R ++R +
Sbjct: 362 VFRVHQAWEAWREHGAWVSAHPGALGPDVAGRFAAASRIDDADGAAAAVRREQLRERVLD 421
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
L+ DD +LV P PP+ + E + L +A + G V +P+
Sbjct: 422 LVGDD-VLVLPAAPSVPPRP--DPVGLEAVRAATLRLTCVAGIGGLPAVVLPM 471
>gi|312138921|ref|YP_004006257.1| amidase [Rhodococcus equi 103S]
gi|311888260|emb|CBH47572.1| putative secreted amidase [Rhodococcus equi 103S]
Length = 446
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 25/393 (6%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+P P +GL AV+DLF IEG G G+P W + + T+ V+ L+ GGAT G
Sbjct: 67 VPATGSGPTSGLRVAVTDLFAIEGQRIGAGNPAWLGQAATETATADSVARLLAGGATVAG 126
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
F + +G N Y TP N AA ++PGG++SGA+ AVA LG DT G +R
Sbjct: 127 IAQTVGFGFGHSGINTSYGTPPNAAASGRVPGGATSGASTAVARRTATVGLGPDTTGSIR 186
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+P+A+ G+ GF P++GAVS G +P+S + D VGW D L VG LL +
Sbjct: 187 IPAAYQGLYGFGPTHGAVSTAGAMPLSRTFDNVGWVCADAPTLATVGDALLP------SA 240
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
P A + L AD VQ +++ + R L L E D + +L ++
Sbjct: 241 PEIEFDAAVTWPGLLAVADADVQPAVRAALAQWKRSGLPP--LAEE-DLDIAALPDWY-- 295
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
+ + +Q YE + W+ + ++ + ++S + + +S+ +
Sbjct: 296 -----DAVVAVQGYEAWQQYGGWVSTATGSVTDEARVNFLAASKVSASTYD--RSLADVR 348
Query: 350 RSA--ISSLLKDDGILVTPTTAYPPPKLG---GKEMLSEDYQNRAFSLLSIASVSGCCQV 404
R+A + L +L+ PTT P G L+ + L+++A+V+G
Sbjct: 349 RAAQTVRDFLGSR-VLLLPTTGSAAPASSDDPGSVHLAATLRTTGL-LITVATVAGLPVA 406
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
TVP+ P +S I G DR +L V +
Sbjct: 407 TVPVRSEGGRPVGLSVIGPAGRDRDVLALVGRI 439
>gi|381406410|ref|ZP_09931093.1| amidase [Pantoea sp. Sc1]
gi|380735712|gb|EIB96776.1| amidase [Pantoea sp. Sc1]
Length = 443
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 173/388 (44%), Gaps = 26/388 (6%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+A P+ GL ++ DLFD+EG T G A+ ++VV L+ GA +GKT
Sbjct: 59 QALSPIDGLPVSIKDLFDVEGEATRAGS-RLLADAPVAAANASVVDKLLLAGAAIVGKTT 117
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFA+S G N HY TP NP Q +PGGSSSGAAVAVA + ++G DT G VR+
Sbjct: 118 MTEFAFSGLGINPHYGTPVNPWQREQQRIPGGSSSGAAVAVAEGMCLAAVGTDTGGSVRI 177
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ--- 227
P+A CG+ GF+P+ ++ G +P+STSLD++G A D + + V+ P A Q
Sbjct: 178 PAALCGLTGFKPTAKRINQRGTLPLSTSLDSIGVIADDVRSCWLLDSVIADRPLALQSLD 237
Query: 228 -RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKG 285
R+ R +P RV+ + + + + + + G D +P L
Sbjct: 238 VRNAR-----------FAVPQTRVLDGLDQHVAQAWQHAITLLKQAGAMVTDITLPELDE 286
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+ N I YE H + ++ A DP + I ++
Sbjct: 287 LNAMNARGG-----ITAYEAWQWHKKSAQAHPEAYDPQVLVRIQRGSHLTVQDATELYQQ 341
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL--SIASVSGCCQ 403
R + I++ L D L+ PT P + + A L SI ++ C
Sbjct: 342 RAAWQQRINAALGDFDALLMPTVPLVAPTIASLSDAQRYMEINALMLRNPSIINMLDGCA 401
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++P P +S + HG D L+
Sbjct: 402 LSLPCHQPGSAPVGLSLASTHGDDARLI 429
>gi|291434939|ref|ZP_06574329.1| amidase [Streptomyces ghanaensis ATCC 14672]
gi|291337834|gb|EFE64790.1| amidase [Streptomyces ghanaensis ATCC 14672]
Length = 434
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 177/377 (46%), Gaps = 24/377 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G AV DLF + G+ G G+P W R S + V L++ GA G DE A
Sbjct: 61 LSGSRVAVKDLFAVAGHAIGAGNPAWLREAPIESAHAAAVQALLQAGADVTGIARADELA 120
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y ++G N HY P NPAAP ++PGGSSSG+A AVA L D LG DT G VRVP+++CG+
Sbjct: 121 YGLSGLNTHYGMPPNPAAPGRVPGGSSSGSASAVALGLADIGLGTDTAGSVRVPTSYCGL 180
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
RPS+G V G I ++ S DTV W R P++L V VL LP + +++++A
Sbjct: 181 YSLRPSHGLVPDTGQIGLAPSFDTVSWITRTPQLLSRVSDVL--LPRRPAQPIKRLLLAT 238
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG----EL 293
D F+L+ PA R+ H+ + D L+ T E
Sbjct: 239 DLFDLVD-PALRLP----------------LHDAAHAWADRLAVPLQPRSSTCAAHLEEW 281
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+ ++Q E H W+++ + A+ P ++ I + + + ++ RS +
Sbjct: 282 AEALGVLQAVEMWQLHGSWLQTHREAVSPLVADAIAAGEGMPAEYLAWARDTVSQARSTL 341
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ L+ LV A L G + + L+ ASV+G +T+P
Sbjct: 342 AELIPPGTALVQ-PAAPTAAPLPGPAVTGMALRTATVQLICAASVAGLPVLTLPGVQSPA 400
Query: 414 CPTSVSFIARHGGDRFL 430
P +S +A G DR L
Sbjct: 401 GPVGLSLVATAGSDRAL 417
>gi|209695179|ref|YP_002263108.1| amidase [Aliivibrio salmonicida LFI1238]
gi|208009131|emb|CAQ79370.1| putative amidase [Aliivibrio salmonicida LFI1238]
Length = 388
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 177/376 (47%), Gaps = 30/376 (7%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
F VSD DI+ G G+P W A + VV L++ GA +GKT +DEF + ++G
Sbjct: 28 FVVSDCIDIKDTPNGLGNPVWLAQQKVAKDNAPVVDLLLKKGAIFVGKTQMDEFGFGLHG 87
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY NP + ++ GGSS GA AVA L D LG D GG+RVP+ + G+ GF+
Sbjct: 88 NNPHYAAIKNPNSEGRLIGGSSCGAIAAVANGLADIGLGTDLSGGIRVPAVYAGLYGFKS 147
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S A + G+ I+ ++GW A+ +R V L P + + +I++ D F
Sbjct: 148 SSYAANMKGVYCIAKEETSLGWVAKSLSDIRKVATTL--TPMSPLMTVDRIVVLDSLF-- 203
Query: 243 LKIPADRVVQVVIKSTEKLFGR----QVLKHENLGEYFDSKVP-SLKGFHKTNGELKNVM 297
L +P + V++ E+L +V++ + + + K S K T G L+N+
Sbjct: 204 LDVPEEAKVKL-----EQLLEASPYYKVVRSKAISKIITMKAAESFKVITATRG-LRNI- 256
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
W+E P L +I ++ + + R+ ++S + SLL
Sbjct: 257 ------------EPWVEKNHPMLSNEIKMQLKWLSSLKYKDERIALEQRDLVKSVLESLL 304
Query: 358 KDDGILVTPTTA-YPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
+ +L+ PTTA PP+ E L + + S+AS++ Q+ +P + P
Sbjct: 305 DEKTLLLLPTTANIAPPETATDEQLYK-LNSLILKYTSLASLADLPQLHLPWFTVNNSPW 363
Query: 417 SVSFIARHGGDRFLLD 432
VS I + G DR L+D
Sbjct: 364 GVSLIGKKGMDRQLID 379
>gi|414174784|ref|ZP_11429188.1| hypothetical protein HMPREF9695_02834 [Afipia broomeae ATCC 49717]
gi|410888613|gb|EKS36416.1| hypothetical protein HMPREF9695_02834 [Afipia broomeae ATCC 49717]
Length = 431
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 178/390 (45%), Gaps = 39/390 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G + DLFDI+G VT G A+ + +V+ L E GA KT + EF
Sbjct: 54 PLDGAVITIKDLFDIKGEVTRAGSKVLPARSKPATADAAIVTRLREAGAVIAAKTNMTEF 113
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS G N HY TP NPA ++PGGSSSGAAVAV + + ++G DT G R+P+AFCG
Sbjct: 114 AYSGLGANPHYGTPGNPADRKRVPGGSSSGAAVAVGDGVGEIAIGTDTGGSTRIPAAFCG 173
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+P+ V G P+S +LD++G AR A + I+A
Sbjct: 174 VTGFKPTVKRVPRTGAFPLSFTLDSIGPIARS----------------VADCANADAILA 217
Query: 237 DDCFELLKIPA--DRVVQVV----IKSTEKLFGRQV-LKHENLGEYF---DSKVPSLKGF 286
+ L PA D V +V I+ + + G+ L LG ++ D + +L
Sbjct: 218 GETPSPLSPPALGDVRVGLVQSYPIEGLDDVVGKAYPLALARLGSHWKGSDITLDALSIM 277
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
H N E V E H + +DP++ A + +IS + ++R
Sbjct: 278 HTAN-ERGGV----APPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKISAA--DYILALR 330
Query: 347 NEMR--SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGC 401
+ R + + +L +LV PT P + + E + R L +I +
Sbjct: 331 DRERGIAQMDALFDKVDVLVMPTVQIVAPTM-DEVSTPESFNKRNVQALMNTAIWNFFDT 389
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
C +++P+ + P + + RHGGDR LL
Sbjct: 390 CAISLPIRLGNALPVGLMLVGRHGGDRKLL 419
>gi|134293034|ref|YP_001116770.1| amidase [Burkholderia vietnamiensis G4]
gi|161521291|ref|YP_001584718.1| amidase [Burkholderia multivorans ATCC 17616]
gi|189352537|ref|YP_001948164.1| amidase [Burkholderia multivorans ATCC 17616]
gi|134136191|gb|ABO57305.1| Amidase [Burkholderia vietnamiensis G4]
gi|160345341|gb|ABX18426.1| Amidase [Burkholderia multivorans ATCC 17616]
gi|189336559|dbj|BAG45628.1| amidase [Burkholderia multivorans ATCC 17616]
Length = 457
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 170/377 (45%), Gaps = 16/377 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL +V DLFD+EG VT G R+ A+ + V L E GA +G+T + EFA
Sbjct: 69 LAGLPVSVKDLFDVEGSVTAAGS-ALLRSAPPANGDAAAVQRLREAGAIIVGRTNMSEFA 127
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS G N HY TPTNP ++ GGSSSGAAVAVA L SL DT G +R+P+A CGI
Sbjct: 128 YSGLGVNPHYGTPTNPVGAGRIAGGSSSGAAVAVARGLCAASLATDTGGSIRIPAALCGI 187
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
GF+P+ AVS G++P+S SLD+VG A + V VL P +
Sbjct: 188 AGFKPTAQAVSRDGVLPLSRSLDSVGPIASTAECCSIVHQVL------TGGEPDTSTLRL 241
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKTNGELKNV 296
D L + D ++ + + F R + G ++ P L K V
Sbjct: 242 DTLR-LAVVTDYLLDELDPMVSRAFDRALALLTAAGASVETVAFPELNAIRAGGYNAKIV 300
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
+ + F H W+ S DP + + ++ + R E+ +A
Sbjct: 301 A--AEAFAF---HRSWLASHAHLYDPRVHTRLLAGKDLPAADYLDALDARAELINAARRR 355
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL--SIASVSGCCQVTVPLGYYDKC 414
L + PT A PK+G + + ++ A L S+ ++ C +T+P+ +
Sbjct: 356 LAAFDAWLMPTVAIVAPKIGDLDDDNAFFRANAAMLRNPSVVNLLDGCALTLPIPSDNPL 415
Query: 415 PTSVSFIARHGGDRFLL 431
P +S G D +L
Sbjct: 416 PQGLSVCGLGGADADVL 432
>gi|90418473|ref|ZP_01226385.1| putative amidase [Aurantimonas manganoxydans SI85-9A1]
gi|90338145|gb|EAS51796.1| putative amidase [Aurantimonas manganoxydans SI85-9A1]
Length = 441
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 184/397 (46%), Gaps = 20/397 (5%)
Query: 51 PPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGK 110
P + PL GL A+ DLFD EG VT G +A ++ A+R + V L GA G+
Sbjct: 62 PARLAGPLAGLLAAIKDLFDEEGEVTTSGSVHFA-GNAPATRDAVAVERLRAAGAIGCGR 120
Query: 111 TVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
T + EFAYS G N HY TP N P ++PGGS+SG A+AVA + DF+LG DT G VR+
Sbjct: 121 TNMSEFAYSGVGLNPHYGTPPNSHDPERIPGGSTSGGAIAVAFGIADFALGSDTGGSVRI 180
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+AF + GF+P+ AV G P+S + D+VG A D V VL A +
Sbjct: 181 PAAFNALAGFKPTQAAVPLDGASPLSGTYDSVGPLALDIATCAAVHAVLSGEDRPAPTTG 240
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
+ + LL D+ V+ ++ K L+ E + E D ++ +
Sbjct: 241 DKPLRLGVMRTLLTDDMDKQVKADFEAALK-----ALRDEGI-ELVDVELAEIA------ 288
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
+ V R++ + H ++++++ A DP + I + R E
Sbjct: 289 -QAGAVNRILVASDAHAIHRGYLDALETAGDPRVLKRIRAAESFGPGEAAAARQTRAEAI 347
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN-RAFSLLSIASVS--GCCQVTVP 407
A + L ++ PT PP L E + +D+ A L + ++++ C TVP
Sbjct: 348 VAFADLADGFDAIIAPTVPIVPPLL---EEVEDDFDRLNALVLRNPSTINFLDGCAATVP 404
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+ + PT ++ G D +LD + + A + ++
Sbjct: 405 MHRSGELPTGLTIFGPGGRDWHVLDVAEEVEAIVGDR 441
>gi|307941425|ref|ZP_07656780.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp.
TrichSKD4]
gi|307775033|gb|EFO34239.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp.
TrichSKD4]
Length = 429
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 188/404 (46%), Gaps = 46/404 (11%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G +V LFD++G T + + AS+ + V L E GA +G T +
Sbjct: 52 AKSPLAGALVSVKALFDLKGETT-TSAAKVLQIDPPASQDAPSVVRLDEAGAVFVGLTNM 110
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
EFAYS G N HY TP NP P PGGS+SG AV+VA L D ++G DT G +R+P+A
Sbjct: 111 SEFAYSGLGLNPHYGTPQNPIYPGCAPGGSTSGGAVSVALGLADIAIGSDTGGSLRIPAA 170
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCGI GF+PS +VS G P+S SLD+ G AR V+ + Q
Sbjct: 171 FCGITGFKPSQASVSLEGGNPLSDSLDSFGPMARTVSACELAWQVM-----SGQ------ 219
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK--GFHKTNG 291
E PA + VV ++ FG + + + E F + V L+ GF
Sbjct: 220 -------ETSSAPAQKARLVVPRN----FGFTEVD-QAIAEGFKAVVSHLRKAGFDVVER 267
Query: 292 ELKNVMRL--------IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCK 343
+L + L + E + ++ ++ +D + A +G+ EIS
Sbjct: 268 DLTSCADLYNQVPPWHMTSVESRAHYETHFQNSGADMDQRVHARMGKAEEISAIEYRQTL 327
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASV 398
+ R ++ + ++ + DD +L+ PTT PPKL L +D +LL S+A+V
Sbjct: 328 NRRQKLIADFATEVGDD-LLILPTTPILPPKLSD---LEDDANFNRLNLLALRNPSLANV 383
Query: 399 SGCCQVTVPLGYYDKCPT-SVSFIARHGGDRFLLDTVQNMYASL 441
+ C + +P Y + T S +A G D LL +++ A L
Sbjct: 384 TDACSIALP--YKNGALTLSAMLVAPGGQDHKLLAVAKSVEAEL 425
>gi|334145700|ref|YP_004538910.1| amidase [Novosphingobium sp. PP1Y]
gi|333937584|emb|CCA90943.1| amidase [Novosphingobium sp. PP1Y]
Length = 402
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 178/382 (46%), Gaps = 19/382 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G + DLF + G+ G G+P W + + V ++ GA IG DE A
Sbjct: 31 LAGSQTVIKDLFRVAGHRIGAGNPVWLEQAPVQTANAWAVQQWLDAGADVIGIAHTDELA 90
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
S++GTN HY TP N AP ++PGGSSSG+A AVAA LV +++ DT G RVP+++CGI
Sbjct: 91 LSLSGTNVHYGTPLNTKAPDRIPGGSSSGSAAAVAAGLVPYAMATDTGGSTRVPASYCGI 150
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL-RHVGHVLLQLPFAAQRSPRQIIIA 236
G R ++G V G++P++ DTVG A L R G +L +AA+ + R +++A
Sbjct: 151 FGIRTTHGRVPVDGLVPLAPRFDTVGVLASSGAWLARATGPLLPD--YAAKPAARCLVVA 208
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D L A V +K+ K + ++ + D ++ E K+
Sbjct: 209 TDVLALADRDAADAVDDAVKAVAKHLDIETVRT----SFADGRLQ----------EWKDA 254
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE-MRSAISS 355
Q E H EWIE KP P I EM ++ N + E + +A+
Sbjct: 255 FLARQPVEVWKTHGEWIEGNKPKFGPGIGLRF-EMASKADPARANLADMAAEQILAALEK 313
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 415
+ G+L T + PKL + ++R ++ IA ++G V+VP P
Sbjct: 314 HVPPGGVLAFATASGAAPKLELPAAEKQSLRDRTIAMTCIAGLAGVPAVSVPAASVAGLP 373
Query: 416 TSVSFIARHGGDRFLLDTVQNM 437
+ +AR G D LL T +
Sbjct: 374 LGLCLLARRGEDEMLLATAAAL 395
>gi|411119354|ref|ZP_11391734.1| amidohydrolase, AtzE family [Oscillatoriales cyanobacterium JSC-12]
gi|410711217|gb|EKQ68724.1| amidohydrolase, AtzE family [Oscillatoriales cyanobacterium JSC-12]
Length = 510
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 179/396 (45%), Gaps = 52/396 (13%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+ P PL G+ F V DLFDI G +T G A S A++ +T+++ L + GA +G
Sbjct: 107 QKPGPLAGVPFGVKDLFDIAGVITLAGSKINAE-RSPATQDATLITRLKQAGAILVGAQN 165
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DE+AY N HY NP P++M GGSS G+ AVA+ +V FSLG DT G +RVPS
Sbjct: 166 MDEYAYGFVTENSHYGPSRNPHDPTRMTGGSSGGSVAAVASGMVPFSLGSDTNGSIRVPS 225
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHV--LLQL-----PFA 225
AFCGI G +P+YG +S P SLD +G FAR +R + + LLQ P
Sbjct: 226 AFCGIFGLKPTYGRLSRARTYPFVGSLDHLGPFARS---VRDIALIFDLLQGADPDDPVC 282
Query: 226 AQRSPR-------------QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
++R P+ +I IADD F K ++ V + L Q H +
Sbjct: 283 SKRPPQPCLPELAKGIEGLRIAIADDYFA--KSAEPEALEAVTTVAQALSATQ---HVTI 337
Query: 273 GEYFDSKVPS--LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGE 330
E ++ + + +N L+++ + Q ++F ++ PA G
Sbjct: 338 PEAHRARAAAFVITASEGSNLHLQDLRQRPQDFDFATRDRFLAGALIPA---------GW 388
Query: 331 MLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF 390
L+ + R+ R + L I++ PTT P +G K ++ + +
Sbjct: 389 YLQ--------AQKFRSWYRDRVRELFTQVDIILAPTTPCVAPLIGQKTLVLDGVEVLLR 440
Query: 391 SLLSI----ASVSGCCQVTVPLGYYDKCPTSVSFIA 422
+ + S G + VP+ K P V IA
Sbjct: 441 PNIGLFTQPLSFIGLPIINVPVQRLGKLPLGVQVIA 476
>gi|404446236|ref|ZP_11011354.1| amidase [Mycobacterium vaccae ATCC 25954]
gi|403650788|gb|EJZ05989.1| amidase [Mycobacterium vaccae ATCC 25954]
Length = 420
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 189/384 (49%), Gaps = 26/384 (6%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PLTG + A+ DL+ + G+ G G+ W + T+ V+ L+ GGA G +
Sbjct: 50 PTGSGPLTGDTVAIKDLYALAGHKVGAGNEVWLAQAPVETSTAPAVAALLAGGAAVAGIS 109
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
DEFAYS+ GTN HY TP NPAAP ++PGGSSSG+A AVA L LG DT G +R+P
Sbjct: 110 RTDEFAYSLAGTNGHYGTPPNPAAPERIPGGSSSGSASAVALGLTTIGLGTDTGGSIRIP 169
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
S++ G+ G R ++GA+S G+IP++ S DTVGW RD L V VL A PR
Sbjct: 170 SSYQGLYGIRTTHGAISVDGLIPLAPSFDTVGWMTRDRAELVKVAGVLEPDLPAVVPFPR 229
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP-SLKGFHKTN 290
+ AD L AD V +++ + + L + + E+ ++P +K F
Sbjct: 230 A-VYADSLIAL----ADPDVASAVRAAIADWPAE-LPIDRI-EFDAGQLPLWVKAFQ--- 279
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
+ Q +E H WI+ AL+PD+ + S + ++ R
Sbjct: 280 --------IRQGWEAWRAHGAWIDLHWDALNPDVRSRFEAAAARSAEELSGADAVLASAR 331
Query: 351 SAISSLLKDDGILVTPTTAYPPPK----LGGKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
+ I + L D +++ ++ PP+ LGG+ + ED + R F L +A +SG V+
Sbjct: 332 ATIDAALGDAVLILPSASSVAPPRDSAALGGEVI--EDIRARTFQLTCLAGISGRPAVSS 389
Query: 407 PLGYYDKCPTSVSFIARHGGDRFL 430
PL P + + DR L
Sbjct: 390 PLPVAGP-PIGICAVGPRNSDRAL 412
>gi|389696150|ref|ZP_10183792.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
gi|388584956|gb|EIM25251.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
Length = 432
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 181/393 (46%), Gaps = 25/393 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ ++ DLFD+ G T G R A + +T+V L + GA +GKT + EF
Sbjct: 52 PLDGVIVSIKDLFDVAGETTLAGSIAL-RDAPPADKDATIVRRLRQAGAVILGKTNMVEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP N A PS++PGGSSSGA V VA + S+G DT G VR+P+A G
Sbjct: 111 AFSGIGLNPHYGTPGNAADPSRIPGGSSSGAGVTVAEGTSEISIGSDTGGSVRIPAALNG 170
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ V G P++ SLD++G ARD + ++ A PR +
Sbjct: 171 VVGFKPTAHRVPLDGAFPLAPSLDSIGPLARDVQDCAFADAIM------AGEEPRLLNAH 224
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN--LGEYFDSKVPS-LKGFHKTNGEL 293
+ +P R+ EK F LKH + D + L+ T
Sbjct: 225 PLVGLRIGVPRGRLFAQTEPMVEKAF-EAALKHLSGAGARIVDHGIDDLLEAMADT---- 279
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
V I E H +W+E+ +DP + I ++ + R + +A+
Sbjct: 280 -TVTSSIASIEASEVHADWLEAKVAEIDPRVHWWIARSGKVPAPIYIRMLRRRRTLVAAM 338
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG----CCQVTVPLG 409
L +L PTTA P + E + Y N+ L+ + G +++P+
Sbjct: 339 DERLAPLDVLALPTTAISAPLIAPLEADIKLY-NKTDDLILRNTTFGNQFDLTGISLPIP 397
Query: 410 YYDKCPTSVSFIARHGGDRFLLD---TVQNMYA 439
++ P + +ARHG D+ LLD +V+ M A
Sbjct: 398 GTER-PVGLMLVARHGHDQRLLDIAASVETMLA 429
>gi|197335992|ref|YP_002156298.1| amidase [Vibrio fischeri MJ11]
gi|197317482|gb|ACH66929.1| amidase, putative [Vibrio fischeri MJ11]
Length = 387
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 172/372 (46%), Gaps = 21/372 (5%)
Query: 63 FAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSING 122
F VSD DI+ G G+P W A + V +++ GA +GKT +DEF + ++G
Sbjct: 28 FVVSDCIDIKNTPNGQGNPTWLLEQRKARENAPAVDLILKKGAIFVGKTQMDEFGFGLHG 87
Query: 123 TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRP 182
N HY N + + GGSSSGA AV D LGID GG+RVP+ + G+ GF+
Sbjct: 88 HNPHYAPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGLYGFKA 147
Query: 183 SYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFEL 242
S AV+ GI I+ ++GW A++ +R V VL P + + +I++ D F
Sbjct: 148 SASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVL--TPMSPLVTVERIVVLDSLFAD 205
Query: 243 LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP-SLKGFHKTNGELKNVMRLIQ 301
+ A ++ +I S+ ++++ +++ + +K S K T G L+N+
Sbjct: 206 IPEEAKTKLETLITSSP----YEIVRSKSISKIITTKAAESFKVLSATRG-LRNL----- 255
Query: 302 RYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDG 361
W E K A+ +I ++ + + R + S + S+L +
Sbjct: 256 --------ELWYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQRELVISVLESILDEKI 307
Query: 362 ILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFI 421
+L+ PTTA P + + + S+AS++ Q+ +P + P +S +
Sbjct: 308 LLLMPTTANIAPPITATDEQLYKLNAQILKYTSLASLADLPQLHLPWFTVNDSPWGISLV 367
Query: 422 ARHGGDRFLLDT 433
+ G DR L+D
Sbjct: 368 GQKGMDRQLIDV 379
>gi|402701981|ref|ZP_10849960.1| amidase [Pseudomonas fragi A22]
Length = 446
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 176/395 (44%), Gaps = 23/395 (5%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G +T G A AASR + VV L GA +G+T +
Sbjct: 65 PSALAGLPVSIKDLFDVAGQITASGSSLLAEA-PAASRDAVVVERLRAAGAIVLGRTNMS 123
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP P A ++ GGSSSGAAV+VA ++ LG DT G +R+P+AF
Sbjct: 124 EFAFSGLGLNPHYGTPLTPCAEQRIAGGSSSGAAVSVALEMAVAGLGTDTGGSIRIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKIL-RHVGHVLLQLPFAAQRSP 230
C + GF+PS V G P++ SLD++G R D +L R + L P +
Sbjct: 184 CNLTGFKPSASRVPLTGTFPLAPSLDSIGALTRSVADSILLDRILSGEQLATPMPSLAGL 243
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
R + D F L D++ + V + E+ G ++ +FD P L + N
Sbjct: 244 RLAVTRD--FVL-----DQLDETVAVAFERSLGLLAEAGASI-RWFD--FPELHQLPRIN 293
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKP-ALDPDISAEIGEMLEISETVIENCKSIRNEM 349
+ E + H +W+E D ++ I I + ++ R +
Sbjct: 294 AAGG-----LTAAEAWHGHRQWLEGDDAQQYDARVAQRIRRGAAIGAADYLDTQAERQRL 348
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSL--LSIASVSGCCQVTVP 407
+ L D + P+ A PPKL + L S+ + C +++P
Sbjct: 349 IAIARERLGDADAWLMPSVAVVPPKLADLATDESFFAANGLVLRNTSVINFLDGCALSLP 408
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
++ P +S HG D +L + + A L+
Sbjct: 409 CQLAEELPVGLSIAGLHGQDARVLQVSRAVEALLR 443
>gi|126666927|ref|ZP_01737903.1| amidase [Marinobacter sp. ELB17]
gi|126628643|gb|EAZ99264.1| amidase [Marinobacter sp. ELB17]
Length = 455
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 183/394 (46%), Gaps = 29/394 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL A+ LFD+ G VT G W + A + +VS L GA G T + EFA
Sbjct: 81 LAGLPIALKALFDVAGEVTHSGSKWWKQI---AQSDALIVSRLRSAGAVVTGHTNMTEFA 137
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS G N HY +P NP AP ++ GGSSSGAA AVA + ++G DT G VR+P+AFCG+
Sbjct: 138 YSGLGLNPHYGSPANPLAPGRICGGSSSGAASAVAQGMAVAAIGTDTGGSVRIPAAFCGL 197
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
+GF+PS + G+ P+S +LD++G AR + + VL A QR +
Sbjct: 198 VGFKPSQQRIPRQGVFPLSNTLDSIGPIARSVECCARIDAVL-----AGQRWQPSAPVGL 252
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG-EYFDSKVPSLKGFHK--TNGELK 294
+ +P + ++ V + F R + + + G + ++ P L + G
Sbjct: 253 RGRRFV-VPTNFMLDDVSVAVSAAFSRSLQQLRDCGAQIVEAPAPVLDALPELLAGGGFT 311
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET---VIENCKSIRNEMRS 351
E + H +W++ DP + + IS + C++ R ++
Sbjct: 312 AA-------ESYHIHRDWLQQHGDEYDPRVRMRMERGAGISAADYLELVRCRAAR--IKQ 362
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPL 408
A L DG+L PT PP L E EDY +L ++A++ C +T+P
Sbjct: 363 ADEWLASYDGLL-APTVPIEPPLLTELET-DEDYARLNLLILRNPTVANLLDLCAITLPN 420
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
P+ + + R+G D LL+T Q M L+
Sbjct: 421 HRSGDVPSGLMLVGRNGADTALLNTAQAMEKGLE 454
>gi|300715728|ref|YP_003740531.1| amidase [Erwinia billingiae Eb661]
gi|299061564|emb|CAX58678.1| Amidase [Erwinia billingiae Eb661]
Length = 453
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 175/375 (46%), Gaps = 25/375 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ ++ DLFD++G T G A A S +T+V L++ GA +GKT + EF
Sbjct: 72 PLDGVPVSIKDLFDLQGEATTGGSTVLADAPVAESH-ATIVDKLLQAGAVIVGKTNMTEF 130
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N HY TP NP A ++PGGSSSGAAV+++ + ++G DT G VR+P+AF
Sbjct: 131 AYSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVSISDGMSLGAIGSDTGGSVRIPAAF 190
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ G++P+ +S G++P+S SLD+VG A D + V+ P +
Sbjct: 191 CGLTGYKPTARRISMAGVLPLSASLDSVGTLAHDVLSCVALDAVIADRPLSLTVKN---- 246
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD----SKVPSLKGFHKTN 290
+AD F +P V++ + F R VL + G +++ L + +
Sbjct: 247 LADAHF---AVPQTGVLEGLDTQVAAAFERAVLTIKQAGAQVSAIPLTEIAELSAINASG 303
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
G ++ +++ H I DP + + I + E + R + +
Sbjct: 304 G-----FTALESWQW---HQPLIAQRAEGYDPRVVSRIRRGEALGEADRQRLVEQRADWQ 355
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDY---QNRAFSLLSIASVSGCCQVTVP 407
+ +S +++ L+ PT + P++ E + Y A S+ + C V++P
Sbjct: 356 TRVSHIVQQYDALLMPTVPFIAPRIADLEADEDAYFRINGAALRNPSVINFLDGCAVSLP 415
Query: 408 LGYYDKCPTSVSFIA 422
+ P + A
Sbjct: 416 CSAKGQAPVGLMVAA 430
>gi|377563803|ref|ZP_09793134.1| putative amidase [Gordonia sputi NBRC 100414]
gi|377529017|dbj|GAB38299.1| putative amidase [Gordonia sputi NBRC 100414]
Length = 487
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 101/171 (59%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
AP PLTG + AV D+F + G+ TG G P + ++ A+ +T V+ L+ GA G
Sbjct: 132 SAPGPLTGTTVAVKDVFAVAGFATGGGVPAYEQSAPIATEHATAVARLLNSGAHIRGIAR 191
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
D+FAYS+ G N H+ TP N A P+ +PGGSSSG A AVA D L DT G +R P+
Sbjct: 192 TDQFAYSMAGDNPHHGTPPNAAVPAALPGGSSSGPASAVAHGDADLGLATDTAGSIRTPA 251
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLP 223
++ G+ G R ++G+VS G++P++ D +G +RDP IL LL P
Sbjct: 252 SYQGLWGLRSTHGSVSTRGLLPLAPDFDAIGLLSRDPDILALATTTLLDDP 302
>gi|70606696|ref|YP_255566.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius DSM 639]
gi|449066919|ref|YP_007434001.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius N8]
gi|449069191|ref|YP_007436272.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius Ron12/I]
gi|68567344|gb|AAY80273.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius DSM 639]
gi|449035427|gb|AGE70853.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius N8]
gi|449037699|gb|AGE73124.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius Ron12/I]
Length = 395
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 178/393 (45%), Gaps = 46/393 (11%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+ L F++ D+ DI+G T G + VV ++E G IGKT EFA
Sbjct: 27 LSNLKFSIKDIIDIKGVPTTAG--SRILNDYIPDTNAYVVEKILEEGGEIIGKTNTHEFA 84
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
T+ + NP ++ GGSS GAAV+VA LVD +G DT G VR+P+A CG+
Sbjct: 85 MGATNTSSIFGPAKNPYDIERISGGSSGGAAVSVALGLVDVGVGTDTGGSVRIPAALCGV 144
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ----LPFAAQRSPR-- 231
+GF+PS G + GIIP S S+DTVG+ +D + L V V L L +R PR
Sbjct: 145 IGFKPSIGLIPTDGIIPFSWSIDTVGFIVKDMQTLNRVLEVTLTDKTVLVSQIRRRPRVG 204
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ DD R ++ V+ + L YFD K + K +G
Sbjct: 205 LFLFGDD-------EVSRALKPVV--------------DTLNNYFDIKEIHNEILEKYSG 243
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVI--ENCKSIRNE- 348
+++ + L + Y + H +W + K PD+ +LE ++ E ++R+
Sbjct: 244 DIRRKIVLPEAYSY---HRKWFKERKDDYFPDVR----RLLENGSKILGYEYVDALRSRH 296
Query: 349 -MRSAISSLLKDDGILVTPTTAYPPPKLG---GKEMLSEDYQNRAFSLLSIASVSGCCQV 404
+ + D +L++PTT PK+ G E+ ++ + S I +V+G +
Sbjct: 297 VLIREYMKIFSDVDVLISPTTKVVAPKISEVIGNEL---TFREKLVSNTEIFNVTGAPSI 353
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
++P+ + P + D +LD + +
Sbjct: 354 SIPVAQLNGLPVGLMVSGELYQDGTVLDIAKRI 386
>gi|424851475|ref|ZP_18275872.1| amidase [Rhodococcus opacus PD630]
gi|356666140|gb|EHI46211.1| amidase [Rhodococcus opacus PD630]
Length = 454
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 175/392 (44%), Gaps = 27/392 (6%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G AV+DL+ + G G G + T+ VV+ L+ GA +G
Sbjct: 77 PTGDGPLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
D+ Y +G N+ + TP NP A +PGG++SGAA AVA D LG+DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGAADIGLGVDTTGSVRIP 196
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+++ G+ GF PS GAVS G+ P++ + DT W D L V L LP A+ R
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLAPTFDTPAWVCGDLDTLVAVSGAL--LPLTAETPFR 254
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ +D + + A V+ + + EK S +P L G
Sbjct: 255 SALTSDGINAVAEAGALGAVRRALTAWEK-----------------SSLPRLTWTDTDIG 297
Query: 292 ELK---NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
L + + +Q YE H +W+ +L + I E+ + E
Sbjct: 298 RLPDWYDAVVAVQGYEAWRLHGDWVGGAMTSLGDEPGRNFAAASRIWESTYGRKLIMLGE 357
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN--RAFSLLS-IASVSGCCQVT 405
I++ + D +L+ T++ P + + ++N RA +L+ +A++SG T
Sbjct: 358 ASQTITAYVGDSLLLLPATSSTAPERT--SYPSGDRFRNTMRATGMLTCLATISGLPNAT 415
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
VPL D P + + +G DR +L V ++
Sbjct: 416 VPLRTDDGVPVGLCLVGPYGRDRDVLAVVASL 447
>gi|389863205|ref|YP_006365445.1| amidase [Modestobacter marinus]
gi|388485408|emb|CCH86952.1| Amidase [Modestobacter marinus]
Length = 535
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 167/377 (44%), Gaps = 23/377 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV DL + G+ G G+P + A+ ++ V++ L+ GA G DE
Sbjct: 156 PLDGVGLAVKDLVGVAGHPIGAGNPVKLAESAPAAASAPVLAALLAAGAHVRGIARTDEL 215
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS++GTN H +P NP + GGS++G A AVA D +G DT G +RVP+++CG
Sbjct: 216 AYSLSGTNVHSGSPANPWGAGLVVGGSTNGPASAVARGTADVGVGTDTAGSIRVPASYCG 275
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G RP++GAV G++P++ S DT+GW R +L V VL LP AA + +++A
Sbjct: 276 LHGLRPTHGAVPLDGVLPLAPSFDTLGWLTRGAGLLHRVAGVL--LPAAAPVT--SLVLA 331
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK-- 294
+D L P + G +P + T+ E +
Sbjct: 332 EDLLALADPPVAAALAAAADELAAASG----------------LPLSRAALATSEERERW 375
Query: 295 -NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
R +Q E H +WI + L P I+ + ++ + ++ E R+A+
Sbjct: 376 FTAFRAVQGAEAWAAHGDWITAHPGVLGPGIAQRFADGAAVTPDQLAAGRAAVAEGRAAL 435
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ L ++ P + P + +Y+ L +A V G P D
Sbjct: 436 AGRLPAGVAVLMPAASSTAPPITADPARKAEYRAATLRLTCLAGVGGLPVAVAPAALVDG 495
Query: 414 CPTSVSFIARHGGDRFL 430
P ++ + G D L
Sbjct: 496 LPVGLAVLGAGGTDTAL 512
>gi|114707760|ref|ZP_01440654.1| putative amidase [Fulvimarina pelagi HTCC2506]
gi|114536749|gb|EAU39879.1| putative amidase [Fulvimarina pelagi HTCC2506]
Length = 448
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 180/399 (45%), Gaps = 39/399 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G+ A+ DL DIEG +TGFG +R +S A T+ V L E G +GKT +
Sbjct: 73 PLHGIPIAIKDLADIEGDITGFG----SRIYSTRPAKTTAPFVQQLEEAGMVIVGKTQMV 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
EFA+ GTN P NP P + GGSSSG+AVAVAAD+V ++G DT G VR+P+
Sbjct: 129 EFAFGSWGTNSVLGAPRNPRMPDDYYIAGGSSSGSAVAVAADMVPAAIGSDTGGSVRIPA 188
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A CG +G + SYG+V G+ +S S DT+G + H+ +L FAA R P
Sbjct: 189 ALCGTVGLKTSYGSVPVDGVAALSPSFDTIG------PLTHHLDDA--RLIFAAMRRPE- 239
Query: 233 IIIADDCF----ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHK 288
+ + F ++++IP+ ++ + F R + +G D + +GF
Sbjct: 240 --LERETFKGVSKIIRIPSRSELEPIDPEIYAAFERSLAVLSEIG-MADRPLELPRGFAD 296
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
+ +M +E + + + A+DP + I + E + R
Sbjct: 297 YQTDTGAIM----AWEAYGSLGDTVNEPDVAIDPAVRTRIRAASAMDEGTYLELIASRQA 352
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF---SLLSIASVSGCCQVT 405
+ + +L +D +++ PTT +P +L D F L A+ C V+
Sbjct: 353 AIAKVEDVLGEDEVILLPTTPFPACRL-------SDVDETIFPMSRLTRFANYFDLCAVS 405
Query: 406 VPLGYYDK-CPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
+P+ P AR + + + + L++
Sbjct: 406 LPVATTKAGLPIGTQICARRNREDLAISVAKRLQKRLRQ 444
>gi|398913736|ref|ZP_10656595.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398179821|gb|EJM67420.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 403
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 181/399 (45%), Gaps = 32/399 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G VT G A+ A + V+ L GA +G+T + EF
Sbjct: 19 PLAGLPISIKDLFDVRGQVTTAGSSLLAQAPPALD-DAFAVARLRAAGAVMLGRTNMSEF 77
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP NP ++ GGSSSGAAV+VA D+ LG DT G +R+P+AFC
Sbjct: 78 AFSGLGLNPHYGTPVNPYDNDRIAGGSSSGAAVSVALDMAVAGLGTDTGGSLRIPAAFCA 137
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKILRHV--GHVLLQLPFAAQRSPR 231
++GF+P+ V +G +P++ SLD++G A D +L V G +L P A R R
Sbjct: 138 LVGFKPTASRVPTLGTLPLAESLDSIGAIAHSVADCILLDQVLSGQLLDTRP-ANLRGLR 196
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD-SKVPSLKGFHKTN 290
+ D + L DR V + KL + +FD S++ L +++
Sbjct: 197 VAVTRDFVLDNL----DREVGAAFERVLKLLN----DAGAVIHWFDFSELCELPSINESG 248
Query: 291 GELKNVMRLIQRYEFKNNHNEWIES-VKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
G + E N H W++S + DP ++ I +S R +
Sbjct: 249 G--------LTAAESWNFHQHWLQSELDTRYDPRVAQRIRRGASLSAADYLELIGHRRRL 300
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED---YQNRAFSL--LSIASVSGCCQV 404
+ L D + + PT A P L KE+ D + A L S+ + C +
Sbjct: 301 SEEAKARLSDFDVWLMPTVACTAPLL--KELEKNDELFFATNALVLRNTSVINFIDGCAI 358
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
+VP + +S +G D +L +++ L E
Sbjct: 359 SVPCHLPGELAIGLSICGLNGHDARVLQAARSIEVLLSE 397
>gi|126731637|ref|ZP_01747442.1| pyrazinamidase/nicotinamidase [Sagittula stellata E-37]
gi|126707803|gb|EBA06864.1| pyrazinamidase/nicotinamidase [Sagittula stellata E-37]
Length = 384
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 147/319 (46%), Gaps = 30/319 (9%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
GL+ AV D DI G+VT G A A + + VV L+ GA +GK + E AY
Sbjct: 22 GLAVAVKDCIDIAGHVTASGSAALADGAPAKAH-AKVVEDLLASGAHVVGKAKMHELAYG 80
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N + TP NP P ++PGGSSSG+AVAVA DL D ++G DT G VR P+ CG+ G
Sbjct: 81 MTGVNAAFGTPVNPRWPDRIPGGSSSGSAVAVAGDLCDAAVGTDTGGSVRQPAICCGLYG 140
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
+P++G +S G P ++LD VG AR K+L R + AD
Sbjct: 141 IKPTFGRISRDGCHPAESTLDCVGVLARSAKVLT-----------------RAMQAADPT 183
Query: 240 FELLKI-PADRVVQVVIKSTEKLFGRQVLK--HENLGEYFDSKVPSLKGFHKTNGELKNV 296
F + A R+ +V + + G ++ E L E ++P ++
Sbjct: 184 FTPEPLTAAPRMARVRVDDLDPRIGEPLVYGLMEGLPEAGYVQLPGME------EAFDAA 237
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
M +I ++ H + P L D+ A + I+ +E + +R + + +
Sbjct: 238 MTVIGAETYRACHALLDD---PRLGDDVRARLSAAGAITPDRLEQAEDVRTRFTAEVDAA 294
Query: 357 LKDDGILVTPTTAYPPPKL 375
L +L+TP PP L
Sbjct: 295 LASVDVLITPAMPTVPPTL 313
>gi|170695017|ref|ZP_02886166.1| Amidase [Burkholderia graminis C4D1M]
gi|170140115|gb|EDT08294.1| Amidase [Burkholderia graminis C4D1M]
Length = 462
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 179/396 (45%), Gaps = 53/396 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ G+ ++ DL D++G VT G AA + VVS L G IG+T + F
Sbjct: 86 PIAGIPVSIKDLLDVKGEVTRAGALALDDMPVAAC-DAPVVSRLRSSGVVLIGRTNMTPF 144
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+ G N H+ TP NP ++PGGSSSGAAV+VA +V ++G DTVG +RVP+A CG
Sbjct: 145 AFSVVGLNSHFGTPGNPWDRDRIPGGSSSGAAVSVADGMVAAAIGSDTVGSIRVPAALCG 204
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKILRHV--GHVLLQLPFAAQRS-- 229
++GF+P+ V G +P+S +LD++G AR D + V G + L R
Sbjct: 205 VVGFKPTQRTVPLSGAVPLSPTLDSIGPLARSVADCAAIHAVISGEAAVPLDMVGVRGLT 264
Query: 230 ---PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
PR+I++ D L I R F R + G + S K
Sbjct: 265 FGVPREIVLDD-----LDIEVGRA-----------FERACARISEAGARIEQV--SFKAL 306
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISE----TVIENC 342
+ + N R+IQ E H E +E DP ISA + +I +++ +
Sbjct: 307 REVDALNGN--RVIQLAEAYAWHRELLERRGADYDPHISARVRSGAQILAADYLSMLSHR 364
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED-------YQNRAFSLLSI 395
+ + E +A S D +L+ PTT+ P + M +ED F+ L
Sbjct: 365 RRLMREFDAATSGF---DALLL-PTTSMIAPTF-DECMAAEDAVRTKLLRNTGPFNFLD- 418
Query: 396 ASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
CC +++P+ + P + GD LL
Sbjct: 419 -----CCSISLPVHRPGEAPVGLMVAGHRDGDWQLL 449
>gi|269795028|ref|YP_003314483.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Sanguibacter
keddieii DSM 10542]
gi|269097213|gb|ACZ21649.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sanguibacter keddieii DSM 10542]
Length = 535
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 178/379 (46%), Gaps = 21/379 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV DLF + G TG G+P W + + +++ + GA G DE
Sbjct: 168 PLAGVGIAVKDLFAVAGQRTGAGNPAWLAQAEVETVDAAALTSFLTAGAHVEGVAHTDEL 227
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S+ GTN H+ TP N AAP ++ GGS+SG A AVAA L D +LG DT G VRVP+++CG
Sbjct: 228 AFSLAGTNVHHGTPPNAAAPGRITGGSTSGPAAAVAAGLADLALGTDTAGSVRVPASYCG 287
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G R ++ AVS G++ ++ S DTVG R +L LL P Q +
Sbjct: 288 LYGLRTTHDAVSRAGLVGLAPSFDTVGVLTRGGPLLASAVETLL---------PEQDVTT 338
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN- 295
D L+ +PA +++ E R ++ L + +P G L++
Sbjct: 339 VD--RLVVVPA------LLELAEPDV-RLAVEAALLALSVRTGIPVETAGEVGPGALESW 389
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
R +Q+ E H ++++ A +P + ++ET + ++ + R+ +
Sbjct: 390 FAAFRTLQQAEAWETHGAFVQAHPGAFEPAVEERFLAGSAVTETDVARAQATITQARTTL 449
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ LL +L P+T+ P+ + + L +AS+ G ++VP
Sbjct: 450 ARLLPHGTVLALPSTSSVAPRTDAGPAEIDLTRAATLRLTCLASLGGLPALSVPTPRVGS 509
Query: 414 CPTSVSFIARHGGDRFLLD 432
P + +A G DR L+D
Sbjct: 510 LPVGLCLVAAPGQDRTLVD 528
>gi|374998840|ref|YP_004974339.1| putative amidase [Azospirillum lipoferum 4B]
gi|357426265|emb|CBS89165.1| putative amidase [Azospirillum lipoferum 4B]
Length = 400
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 149/324 (45%), Gaps = 39/324 (12%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
GL+ AV D DI G+ T G + + AASR + VV L+ G +GKT + E AY
Sbjct: 23 GLTVAVKDCLDIAGFPTRCGSAAFDQA-PAASRHAAVVDALLAAGCRIVGKTTMHELAYG 81
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N + TP NP P +PGGSSSG+AVAVAA LVDF++G DT G VR P+A CG+ G
Sbjct: 82 MTGINARFGTPVNPGWPELIPGGSSSGSAVAVAAGLVDFAVGTDTGGSVRQPAACCGVFG 141
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
+P++G + G P +SLD +G AR +L R ++ D
Sbjct: 142 MKPTFGRIDRRGASPADSSLDCIGPLARSIGMLE-----------------RAMVAMDPG 184
Query: 240 FELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE------L 293
F +PA K ++ +L+H + G D + L H L
Sbjct: 185 F----LPA--------KGLDRPPRLALLRHPD-GAGADREWTGLLPAHAAAMPWVELPLL 231
Query: 294 KNVMRLIQRYEFKNNHNEW--IESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ R + H + + S AL D+ A + +++ + + +R +
Sbjct: 232 DDAFRAGMTVIARETHRAFGHLLSEPAALGDDVRARLDAAGRVTDEELARAEDVRARFTA 291
Query: 352 AISSLLKDDGILVTPTTAYPPPKL 375
+ +LL D LVTP PPP L
Sbjct: 292 EVDALLADCDALVTPALPMPPPGL 315
>gi|398794521|ref|ZP_10554568.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. YR343]
gi|398208526|gb|EJM95247.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. YR343]
Length = 447
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 174/381 (45%), Gaps = 22/381 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD+ G VT G S A+ +++V L GA +GKT + EFA
Sbjct: 68 IDGLPISIKDLFDVAGEVTTAGS-RLLSNASVATANASIVDRLQLSGAAIVGKTNMSEFA 126
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
++ G N HY TP NP A ++PGGSSSGAAVAV+ + ++G DT G VR+P+A C
Sbjct: 127 FTGLGVNPHYGTPANPWQRAQQRIPGGSSSGAAVAVSDGMCLAAVGTDTGGSVRIPAALC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G+ GF+PS + G +P++ SLD++G A D + LL AAQ P +I
Sbjct: 187 GLTGFKPSASRIDQRGTLPLAASLDSIGVIAHDVR-----SCWLLDSVIAAQ--PLEIDE 239
Query: 236 ADDCFELLKIPADRVVQVVIK--STEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+ IP RV+ + + S L VL+ + + K+ L +
Sbjct: 240 RNLSEAHFVIPQTRVLAGLDEHVSAAWLHALDVLRAQGV------KITELPLQELAELDT 293
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
N I +E H ++ +S A DP + I ++E +R + + +
Sbjct: 294 INARGGITAWEAWQWHQQYAQSQSEAYDPQVLTRIQRGSLLNEEDAAELYQLRADWKQRV 353
Query: 354 SSLLKD-DGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSL--LSIASVSGCCQVTVPLGY 410
+ DGIL+ PT P L E + Q L S+ ++ C +++P
Sbjct: 354 EQAVAPFDGILM-PTVPLIAPTLAELEDPARYMQVNLLMLRNTSVINMLDGCSISLPCHQ 412
Query: 411 YDKCPTSVSFIARHGGDRFLL 431
P + + HG D LL
Sbjct: 413 PGAAPVGLMLSSTHGNDAALL 433
>gi|333916681|ref|YP_004490413.1| Amidase [Delftia sp. Cs1-4]
gi|333746881|gb|AEF92058.1| Amidase [Delftia sp. Cs1-4]
Length = 456
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 181/402 (45%), Gaps = 33/402 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ GL +V DLFDI G+ T G A RT+ VV L + GA +G T + EF
Sbjct: 71 PIEGLPVSVKDLFDIAGFPT-LGGSRLLADAPPAQRTAEVVQRLRQAGAVIVGTTNMTEF 129
Query: 117 AYSINGTNKHYDTPTNP----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
AYS G N HY TP NP ++PGGSSSGAA++V + ++G DT G VR+PS
Sbjct: 130 AYSGLGINPHYGTPRNPWQRDEDGGRIPGGSSSGAAISVTDGMAMAAIGSDTGGSVRIPS 189
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA-QRSPR 231
A CG+ GF+P+ VS G++P+S +LD++G A + + +L P +P
Sbjct: 190 ALCGLTGFKPTARRVSMEGVLPLSANLDSIGPLAPSVRCCATLDAILSGEPLGELHAAPL 249
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
Q LL P + V+ + + + R + G + V + F G
Sbjct: 250 Q------GLRLLA-PTNVVLDGMDATVAAAWERTLTLLSQAGAHITHAV--VAPF----G 296
Query: 292 ELKNV-----MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
EL ++ + + + +H I + DP + I +IS + + R
Sbjct: 297 ELADINSKGGFTAAEAWAWHRHH---IATRLSEYDPRVGTRILRGKDISAADYIDLLARR 353
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQ 403
+ +A+S+ + D ++V PT PK+ E Y +L ++ + C
Sbjct: 354 RQWIAAVSAQMADHDLIVMPTVPVVAPKIADLTQSDEAYFGANGLILRNPTLINFLDGCA 413
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDT---VQNMYASLQ 442
+++P + P +S G DR LL V+ + AS Q
Sbjct: 414 ISLPCQRAGEAPVGLSLAGLGGQDRRLLSVALAVEQLLASAQ 455
>gi|422322042|ref|ZP_16403085.1| amidase [Achromobacter xylosoxidans C54]
gi|317403033|gb|EFV83570.1| amidase [Achromobacter xylosoxidans C54]
Length = 448
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 167/389 (42%), Gaps = 36/389 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWART-HSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
+ GL ++ DLFD+EG T G AR AA + VV L+ GA IG+T + EF
Sbjct: 69 IEGLPISIKDLFDVEGETTMAGS--VAREGEPAADANAEVVQRLIAAGAVIIGRTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N HY TP NP A ++PGGSSSGAAV+VA + +G DT G VR+P+A
Sbjct: 127 AYSGLGINPHYGTPLNPWDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAAL 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV--------GHVLLQLPFAA 226
CG+ GF+PS VS G++P+S +LD++G A + + G V LP
Sbjct: 187 CGLTGFKPSAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAILSGEGGPVPEALPLRG 246
Query: 227 QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKG 285
R L +P + + K F R V + + G D +P
Sbjct: 247 LR--------------LAVPRTLALDGMDKHVSDTFARAVARLKEAGALVDEIAIPEFAE 292
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
N K + + + H E I DP + + I ++S +
Sbjct: 293 LANINA--KGGFTAAEAWAW---HRELIARAGKRYDPRVVSRILRGKDMSAADYLDLLDA 347
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCC 402
R +A+ + L+ PTT P + + E Y +L ++ + C
Sbjct: 348 REAWVAAVDRRIAGYDALIMPTTPIVAPAVADLQASDEAYYAANGLILRNPTLINFLDGC 407
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++P P + A +G DR +L
Sbjct: 408 ALSLPCHAAGTAPVGLMIAASNGADRRVL 436
>gi|160896891|ref|YP_001562473.1| amidase [Delftia acidovorans SPH-1]
gi|160362475|gb|ABX34088.1| Amidase [Delftia acidovorans SPH-1]
Length = 456
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 181/402 (45%), Gaps = 33/402 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ GL +V DLFDI G+ T G A RT+ VV L + GA +G T + EF
Sbjct: 71 PIEGLPVSVKDLFDIAGFPT-LGGSRLLADAPPAQRTAEVVQRLRQAGAVIVGTTNMTEF 129
Query: 117 AYSINGTNKHYDTPTNP----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
AYS G N HY TP NP ++PGGSSSGAA++V + ++G DT G VR+PS
Sbjct: 130 AYSGLGINPHYGTPRNPWQRDEGGGRIPGGSSSGAAISVTDGMAMAAIGSDTGGSVRIPS 189
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA-QRSPR 231
A CG+ GF+P+ VS G++P+S +LD++G A + + +L P +P
Sbjct: 190 ALCGLTGFKPTARRVSMEGVLPLSANLDSIGPLAPSVRCCATLDAILSGEPLGELHAAPL 249
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
Q LL P + V+ + + + R + G + V + F G
Sbjct: 250 Q------GLRLLA-PTNVVLDGMDATVAAAWERALSLLSQAGAHITHVV--VAPF----G 296
Query: 292 ELKNV-----MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
EL ++ + + + +H I + DP + I +IS + + R
Sbjct: 297 ELADINSKGGFTAAEAWAWHRHH---IATRLSEYDPRVGTRILRGKDISAADYIDLLARR 353
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQ 403
+ +A+S+ + D ++V PT PK+ E Y +L ++ + C
Sbjct: 354 RQWIAAVSAQMADHDLIVMPTVPVVAPKIADLTQSDEAYFGANGLILRNPTLINFLDGCA 413
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDT---VQNMYASLQ 442
+++P + P +S G DR LL V+ + AS Q
Sbjct: 414 ISLPCHRAGEAPVGLSLAGLGGQDRRLLSVALAVEQLLASAQ 455
>gi|118592593|ref|ZP_01549984.1| Amidase [Stappia aggregata IAM 12614]
gi|118434940|gb|EAV41590.1| Amidase [Stappia aggregata IAM 12614]
Length = 383
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 161/376 (42%), Gaps = 39/376 (10%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
GLS AV D DI G VT G A A S + VV +L+ G IGK + E A+
Sbjct: 21 GLSVAVKDCIDIAGEVTACGS---AAVSHAPSEHADVVKSLLASGCKIIGKANMHELAFG 77
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N + TP NP P ++PGGSSSG+AVAVAA L DFS+G DT G VR P+ CGI G
Sbjct: 78 VTGVNTVFGTPVNPNWPDRIPGGSSSGSAVAVAAGLCDFSVGTDTGGSVRQPAICCGIYG 137
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ---RSPRQIIIA 236
+P++ +S G P +SLD VG FAR L F + +PR ++
Sbjct: 138 LKPTFARISRKGCHPADSSLDCVGVFARTSAGLTQA-MAASDPSFKTETCTTAPRLAWVS 196
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D D + KL G + + + E F + +
Sbjct: 197 TD--------PDPSGDSFATLSRKLPGLERITLDAFDEAFAAGM---------------- 232
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
I YE +E+ +P L D+ A I + + ++ +++R A+ +
Sbjct: 233 --TIISYETAQAFGHLLEA-EPPLGQDVKARIAKAQSVKSAEVKAAEAVRTRFTEAVDTA 289
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS-LLSIASVSGCCQVTVPLGYYD-KC 414
L+ L+ P PP L E S+ Q + L ++SG + +P D
Sbjct: 290 LEQCDALIMPALPTVPPTL---EAASDPAQIIPLTRFLRPFNLSGHPSLVLPFAIVDGSL 346
Query: 415 PTSVSFIARHGGDRFL 430
P + + R D L
Sbjct: 347 PMGLQIVGRKADDARL 362
>gi|410631137|ref|ZP_11341818.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola arctica BSs20135]
gi|410149339|dbj|GAC18685.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola arctica BSs20135]
Length = 373
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 167/377 (44%), Gaps = 41/377 (10%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D D+ G+VT G T A S + VV+T++ G IGK + E A+ +
Sbjct: 16 LVAGVKDNIDVAGFVTQAGSESLCHTPIALSH-ADVVTTVLGSGVKLIGKLNMHELAFGM 74
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N++ TPTN P + GGSSSG A AVA VDFS+G DT G +RVP+A CG+ G
Sbjct: 75 TGVNEYLGTPTNYLFPDYITGGSSSGCATAVAQGKVDFSIGTDTGGSIRVPAACCGVFGL 134
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P++G +S G++P +SLD +G A F+A R + D F
Sbjct: 135 KPTFGRLSRRGVLPAESSLDCIGPLA-----------------FSADRLIDAMCSMDKTF 177
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQV---LKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
+K A+ + V + E + QV LK E L + + +PS + +L N
Sbjct: 178 SPIKPLANIKLARVSVNAESVIQMQVDNALKKEFL-KVSQTDLPSFTAAYDMALKLMN-- 234
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
+E + + + K L PD+ + I +V+ + +R + S L
Sbjct: 235 -----FEMWQAYGHLVGTGK--LGPDVENRLLGARNIDPSVVTEAEVVRKRFSQEVDSAL 287
Query: 358 KDDGILVTPTTAYPPPK----LGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ LV PT A P K L G+ L R F+L SG +T+P+
Sbjct: 288 RGVDALVLPTLAAFPLKRIEALAGQNDLHISSLTRPFNL------SGHPAITIPIRNNLG 341
Query: 414 CPTSVSFIARHGGDRFL 430
P + + G D +
Sbjct: 342 KPVGMQLVGAKGRDEVI 358
>gi|418405622|ref|ZP_12978942.1| hypothetical protein AT5A_00330 [Agrobacterium tumefaciens 5A]
gi|358007535|gb|EHJ99857.1| hypothetical protein AT5A_00330 [Agrobacterium tumefaciens 5A]
Length = 452
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 98/152 (64%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG VT G + + ASR + VVS L E G CIG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLS-NDAPASRDADVVSALKEAGMVCIGRTNMSEFA 128
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NPA+ ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 129 FSGLGINPHYGTPRNPASTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G++ S G S G+ P++ SLD++G R
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTR 220
>gi|265996686|ref|ZP_06109243.1| amidase [Brucella ceti M490/95/1]
gi|262550983|gb|EEZ07144.1| amidase [Brucella ceti M490/95/1]
Length = 318
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 161/335 (48%), Gaps = 35/335 (10%)
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A+S+ G N HY P NPAAP ++ GGSSSG+A AVA L D +LG DT G +R P++FC
Sbjct: 1 MAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFC 60
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G++G R ++G + GI+P++ SLDT+GWFARD + VG VLL
Sbjct: 61 GLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLL--------------- 105
Query: 236 ADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK--HENLGEYFDSKVPSLKGFHK 288
DD E LL +P + Q+++ E R + + + P+L
Sbjct: 106 GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPTL----- 158
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
+ EL R IQ E NH WI S L P I+ E++ +++N ++ R
Sbjct: 159 SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRAR 218
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+++ + +L PT P G + Y+ +A LL ++ +SG Q+T+PL
Sbjct: 219 FAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLPL 278
Query: 409 GYYDKCPT------SVSFIARHGGDRFLLDTVQNM 437
G T +SFI G DR L+ Q +
Sbjct: 279 GSLRPGGTMHDASFGISFIGPRGSDRTLIALAQTI 313
>gi|332716026|ref|YP_004443492.1| amidase family protein [Agrobacterium sp. H13-3]
gi|325062711|gb|ADY66401.1| amidase family protein [Agrobacterium sp. H13-3]
Length = 452
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 98/152 (64%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG VT G + + ASR + VVS L E G C+G+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLS-NDAPASRDADVVSALKEAGMVCVGRTNMSEFA 128
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NPA+ ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 129 FSGLGINPHYGTPRNPASTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G++ S G S G+ P++ SLD++G R
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTR 220
>gi|398801495|ref|ZP_10560737.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. GM01]
gi|398091816|gb|EJL82244.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. GM01]
Length = 447
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 180/387 (46%), Gaps = 32/387 (8%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+A P+ GL ++ DLFD+ G VT G + AA+ S +V L + GA +GKT
Sbjct: 63 QARSPIDGLPISIKDLFDVAGEVTLAGSHLLSNGTPAAANAS-MVERLQQAGAALVGKTN 121
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFA++ G N HY TP NP ++ +PGGSSSGAAVAVA + ++G DT G VR+
Sbjct: 122 MTEFAFTGLGINPHYGTPANPWQRTEKRIPGGSSSGAAVAVADGMCLAAVGTDTGGSVRI 181
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+A CG+ GF+PS + G +P++ SLD++G A D + + V+ P
Sbjct: 182 PAALCGLTGFKPSASRIDQRGTLPLAASLDSIGVIAHDVRSCWLLDSVIADQPLVMD--- 238
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGR--QVLKHE--NLGEYFDSKVPSLKGF 286
Q ++D F IP RV+ + + + R +VL+ + L E ++ L
Sbjct: 239 -QRELSDAHF---VIPQTRVLAGLDQHVSAAWLRALEVLRAQGVQLTELPLDELAELDTM 294
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEML--EISETVIENC 342
+ G I +E H + S A DP + I G +L E + + +
Sbjct: 295 NARGG--------ITAWEAWQWHQAYALSQPDAYDPQVLTRIKRGSLLNAEDAAELYQRR 346
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSL--LSIASVSG 400
+ + +A++ DGIL+ PT P L + + Q L S+ ++
Sbjct: 347 ADWQQRVENAVAPF---DGILM-PTVPLIAPTLAELDDPARYMQVNMLMLRNTSVINMLD 402
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGD 427
C +++P P + + HG D
Sbjct: 403 GCSISLPCHQPGAAPVGLMLSSTHGND 429
>gi|357023884|ref|ZP_09086051.1| amidase [Mesorhizobium amorphae CCNWGS0123]
gi|355544164|gb|EHH13273.1| amidase [Mesorhizobium amorphae CCNWGS0123]
Length = 432
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 170/391 (43%), Gaps = 19/391 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DLFD+ G T G A + A R + +V L + GA +GKT + EF
Sbjct: 52 PLDGTIVSIKDLFDVAGEPTTAGSLMLANA-APAGRDAVIVRRLRQAGAVILGKTNMTEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY P N A S +PGGSSSGA VAV + S+G DT G VR+P++ G
Sbjct: 111 AFTAIGDNLHYGIPGNAADASLIPGGSSSGAGVAVGEGTSEVSIGSDTGGSVRIPASLNG 170
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ V G P+S +LD++G AR V+ A P ++ A
Sbjct: 171 VVGFKPTARRVPRDGAFPLSRTLDSIGPLARSVAQCAAADEVM------AGGEPALLVPA 224
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
+ IP + + F + K E D++V L +++
Sbjct: 225 SLAGLRIGIPRGVLFEEAEGEVATAFDLCLRKV----ELADARVADLS-IDDLLADMRAA 279
Query: 297 MR--LIQRYEFKNNHNEWIES-VKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
R I E H +W+ + +DP +S + L + + R E+ +A+
Sbjct: 280 TRRGTIAAMEGAEVHADWLATGASVPVDPHVSGPLSRALAVPASAYIRTIRRRTELAAAM 339
Query: 354 SSLLKDDGILVTPTTAYPPPK---LGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
L +L PTT P + G E L E + IA+ C +++P+
Sbjct: 340 DKRLASIDVLALPTTPIVAPSIAAMAGDEALRERTEGLLLRNTQIANQFDLCAISLPMPG 399
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
+ P + +AR+G D L + A L
Sbjct: 400 TAR-PVGLMLVARNGHDHHLFQIAAGIEALL 429
>gi|75909879|ref|YP_324175.1| amidase [Anabaena variabilis ATCC 29413]
gi|75703604|gb|ABA23280.1| Amidase [Anabaena variabilis ATCC 29413]
Length = 464
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 183/410 (44%), Gaps = 24/410 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFD+ G T G A + ASR +T V+ L + GA +G +DE+A
Sbjct: 67 LAGVPFAVKNLFDLVGLTTLAGAKINAE-NPPASRDATAVAKLKQAGAVLVGALNMDEYA 125
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP ++ GGSS G+AVAVAA LV F+LG DT G +RVP+A CG+
Sbjct: 126 YGFVTENSHYGVTRNPHDLQRVAGGSSGGSAVAVAAGLVPFTLGSDTNGSIRVPAALCGV 185
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQR--SPR 231
GF+P+YG +S G+ S+S D +G FAR + + +L + P QR +P
Sbjct: 186 FGFKPTYGRLSRGGVTLFSSSFDHIGPFARSVGDIATIFDILQGGDDRDPICTQRPANPT 245
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ D + AD Q S +QV N+ Y +L H+
Sbjct: 246 LPQLHQDISHIRIAIADDYFQKGATSAALAAVQQVADALNVTNYV-----TLPEAHRA-- 298
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ +I E N H + + + DP I + R R
Sbjct: 299 --RAAAFVITASEGANLHLDKLRTRSQDFDPATRDRFLAGALIPSNWYIQAQRFRQWYRD 356
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRAFSLLSIASVS--GCCQVTVP 407
I + ++ +++ PTT P +G + M+ E+ R L +S G ++VP
Sbjct: 357 RIREVFQNVDVILAPTTPITAPLIGQQTMILDGEEILVRPHLGLFTQPLSFIGLPVLSVP 416
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNT 457
+ + P V IA + F+L + A L+ Q ++ S ++ N+
Sbjct: 417 IQRPNTLPLGVQLIAAPYNEAFIL----QVAAVLEAQGVVSAVSPINYNS 462
>gi|242240849|ref|YP_002989030.1| amidase [Dickeya dadantii Ech703]
gi|242132906|gb|ACS87208.1| Amidase [Dickeya dadantii Ech703]
Length = 447
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DLFD+ G T G R AAS + VV+ L++ GA +GKT + EFA
Sbjct: 70 LEGIPVSVKDLFDVSGEPTTAGS-RVLRDVPAASGHAAVVARLLQAGAVVLGKTNMTEFA 128
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP ++PGGSSSGAAV+VA + ++G DT G VR+P+AFC
Sbjct: 129 YSGLGLNPHYGTPANPWDRLTRRIPGGSSSGAAVSVADGMCYGAIGSDTGGSVRIPAAFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
G++GF+P+ + G++P+ST+LD+VG ARD
Sbjct: 189 GLVGFKPTAQRIDRAGVLPLSTALDSVGVIARD 221
>gi|152994400|ref|YP_001339235.1| amidase [Marinomonas sp. MWYL1]
gi|150835324|gb|ABR69300.1| Amidase [Marinomonas sp. MWYL1]
Length = 423
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 183/391 (46%), Gaps = 23/391 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DLF ++GY T G S A + V L + GA+ +G T + E
Sbjct: 48 PLNGAIISIKDLFQVQGYKTQAGSV--FLDGSLAQEDAEAVVALRKAGASLLGHTNMTEL 105
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS G N HY TP NP ++ GGS+SG A +VA + D +LG DT G +R+P+ FCG
Sbjct: 106 AYSGLGLNPHYGTPDNPINAGRITGGSTSGGAASVALGVADAALGTDTGGSLRIPAGFCG 165
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+PS VS G +P+S SLD+VG A+ + + +L + + + +
Sbjct: 166 LTGFKPSQQTVSRKGCLPLSNSLDSVGPIAKTVEECELLWQIL-----SGTTTSSETAKS 220
Query: 237 DDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSK-VPSLKGFHKTNGELK 294
D EL + +P + + + E+ F ++ + E + + + +L+ + K
Sbjct: 221 SDADELRIVVPTNFGMNDLDPLVEEGFVAKLAQLEAASITIEHRFIEALESY-------K 273
Query: 295 NV-MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
N+ + +E + + + +DP +++ I I+E V + ++ R +
Sbjct: 274 NLPVWQFSAFECHTFYGKNYDLDNAEIDPRVASRIARAKTINEEVFQQTQAARQAFIQQM 333
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPLGY 410
++ + IL+ PT A PK E DY L S+A+V C +++P +
Sbjct: 334 ANEEANTLILL-PTVAVVAPKFSDLEQ-DADYDRLNLLCLRNTSLANVLNGCSISLPFSF 391
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
+ P + A +G D+ LL + A L
Sbjct: 392 KQE-PMGLMLTAANGQDQALLSLAKKWQAIL 421
>gi|254502596|ref|ZP_05114747.1| Amidase, putative [Labrenzia alexandrii DFL-11]
gi|222438667|gb|EEE45346.1| Amidase, putative [Labrenzia alexandrii DFL-11]
Length = 456
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 174/382 (45%), Gaps = 29/382 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G +V LFD+ G VT + A+ + ++ L GA G T + EF
Sbjct: 85 PLAGALVSVKALFDVAGEVTTSAT-TVLKNSPPATEDAPAIARLDAAGAVFTGLTNMSEF 143
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS G N HY TP N P PGGS+SG AVAVA L D ++G DT G +R+P+AF G
Sbjct: 144 AYSGLGLNPHYGTPENALYPGCAPGGSTSGGAVAVALGLCDIAIGSDTGGSLRIPAAFNG 203
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ--RSPRQII 234
I GF+P+ VS G P+S SLD+ G A+ V+ + ++ R ++
Sbjct: 204 ITGFKPTQSTVSMAGGRPLSDSLDSFGPMAKTVAECELTWQVMAGRETIPEEPKAARLVV 263
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+ F ++ P + V++ + G +V++ + +KVP +H T+
Sbjct: 264 PKNFGFNEIEAPVAEGFKAVVEKLREA-GLEVVEKDLAVIDLYAKVPP---WHMTS---- 315
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
E + ++ + ++ DP + A +G EIS + R + A +
Sbjct: 316 --------VESRAHYEDHFQTSPEKFDPRVHARMGRAEEISAVEYRQTLNRRQTLIEAFA 367
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSGCCQVTVPLG 409
+ D IL+ PTT PPK+ E L++D +LL S+A+V C + +P
Sbjct: 368 DEVGSD-ILLLPTTPILPPKI---EDLADDGDFNRLNLLALRNPSLANVCDACGIALPYQ 423
Query: 410 YYDKCPTSVSFIARHGGDRFLL 431
K S IA G D LL
Sbjct: 424 NAGKT-LSAMLIAPGGKDEKLL 444
>gi|15806394|ref|NP_295100.1| amidase [Deinococcus radiodurans R1]
gi|6459130|gb|AAF10946.1|AE001983_7 amidase, putative [Deinococcus radiodurans R1]
Length = 394
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 177/401 (44%), Gaps = 60/401 (14%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR--TSTVVSTLVEG 103
P QPL PL GL+F+V DL+ + G+ P A T + S +V L+E
Sbjct: 23 PAQPLQTHDAGPLAGLTFSVKDLYGVPGW------PLTASTRAPVPDPGASVLVGRLLEL 76
Query: 104 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGID 163
GA +GKT + E A I G N + T T+P P ++PGGSSSGAAV+VA VDF+LG D
Sbjct: 77 GAAALGKTHLHEVALGITGMNGYGGT-THPRDPERVPGGSSSGAAVSVALGQVDFALGTD 135
Query: 164 TVGGVRVPSAFCGILGFRPSYG--AVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ 221
T G +RVP+A+C ++G++P+ G A S G++P+S + D G ARD ++ V L
Sbjct: 136 TGGSIRVPAAWCSVVGYKPTKGHPAWSTEGVLPLSWTCDHAGPLARDLSMVVRVYQAL-- 193
Query: 222 LPFAAQRSPRQIIIADDCFELLKIPA----DRVVQVVIKSTEKLFGR-QVLKHENLGEYF 276
+P+ D L +P + V V+ + L R + +L E
Sbjct: 194 --GGGHVTPQDW---QDVRVGLWLPEGWTDETVRDAVLAYADDLKARGATVTPVDLPEML 248
Query: 277 DSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISE 336
D+ P I E H E ++ P P + +SE
Sbjct: 249 DAYSP------------------IVLSEAARVHAEALQQPDPGFLPFTLMSLRNGAALSE 290
Query: 337 TVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM-LSEDYQ--------- 386
++ R E R + LL + +L+ P PPP +G E+ L E Q
Sbjct: 291 EEVQAAHERRTEYRVLLDRLLAEFDVLLAPAVPTPPPLIGQDEVTLLEGPQVLRRAVLRL 350
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGD 427
N FSLL G +++P D V + RHG D
Sbjct: 351 NTPFSLL------GAPVLSLPSSVPD---VGVQLVGRHGQD 382
>gi|390958544|ref|YP_006422301.1| amidase [Terriglobus roseus DSM 18391]
gi|390413462|gb|AFL88966.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Terriglobus roseus DSM 18391]
Length = 444
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 185/404 (45%), Gaps = 39/404 (9%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL GL +V DLFD+ G VT G A AA + S+VV+ L GA IG+T + E
Sbjct: 65 QPLLGLPVSVKDLFDVAGEVTTAGSVVLANAAPAA-KDSSVVARLRAAGAVLIGRTNMTE 123
Query: 116 FAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FAYS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A
Sbjct: 124 FAYSGLGLNPHYGTPANPWDRANRRIPGGSSSGAAVSVTDLMAAAAIGTDTGGSVRIPAA 183
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL---LQLPFAAQRSP 230
CG++GF+P+ V GI+P++ SLD+VG A + + VL P +
Sbjct: 184 LCGLVGFKPTARRVPMDGIVPLARSLDSVGPIAPTVECCARLDAVLSGDFYRPLETKPLT 243
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD-------SKVPSL 283
R F +L+ V++ + + T F +L ++ G + D +++P+
Sbjct: 244 RM------RFGILQ---GYVLEGLDEPTAFAFQEALLAIQSAGAHTDPVHFDALNRIPA- 293
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCK 343
N + + + H +ES DP +SA I + +
Sbjct: 294 ----------SNQTAAAEAFAW---HRNLLESSGHRYDPHVSARILHGAGMLAADFLDLM 340
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSG 400
R E+ + +L ++ PTT + P + E + Y + ++L SI +
Sbjct: 341 QARREIIAEAENLFAPYDAILLPTTPWIAPPIAELEASDDAYFHANGAMLRNTSIFNFLD 400
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
C +++P+ P + G DR +L+ + A + ++
Sbjct: 401 GCALSIPIHRPGTAPVGLMLANSAGLDRQVLEAGAAIEAIMNQR 444
>gi|261753105|ref|ZP_05996814.1| amidase [Brucella suis bv. 3 str. 686]
gi|261742858|gb|EEY30784.1| amidase [Brucella suis bv. 3 str. 686]
Length = 318
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 160/335 (47%), Gaps = 35/335 (10%)
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A+S+ G N HY P NPAAP ++ GGSSSG+A AVA L D +LG DT G +R P++FC
Sbjct: 1 MAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFC 60
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G++G R ++G + GI+P++ SLDT+GWFARD + VG VLL
Sbjct: 61 GLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLL--------------- 105
Query: 236 ADDCFE-----LLKIPADRVVQVVIKSTEKLFGRQVLK--HENLGEYFDSKVPSLKGFHK 288
DD E LL +P + Q+++ E R + + + P+L
Sbjct: 106 GDDAQEFKLTQLLYMPV--LEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPTL----- 158
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
+ EL R IQ E NH WI S L I+ E++ +++N ++ R
Sbjct: 159 SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGLGIADRFAYGAEMTADMVKNQRARRAR 218
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+++ + +L PT P G + Y+ +A LL ++ +SG Q+T+PL
Sbjct: 219 FAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLPL 278
Query: 409 ------GYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
G P +SFI G DR L+ Q +
Sbjct: 279 GSLRPGGTMHDAPFGISFIGPRGSDRTLIALAQTI 313
>gi|421481278|ref|ZP_15928864.1| amidase [Achromobacter piechaudii HLE]
gi|400200728|gb|EJO33678.1| amidase [Achromobacter piechaudii HLE]
Length = 449
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 163/387 (42%), Gaps = 36/387 (9%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWART-HSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
GL ++ DLFDIEG T G AR AA + VV L+ GA IG+T + EFAY
Sbjct: 71 GLPISIKDLFDIEGETTMAGS--VAREGEPAADENAEVVQRLIAAGAVIIGRTNMTEFAY 128
Query: 119 SINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
S G N HY TP NP A ++PGGSSSGAAV+VA + +G DT G VR+P+A CG
Sbjct: 129 SGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAALCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--------QLPFAAQR 228
+ GF+PS VS G++P+S +LD++G A + + VL LP R
Sbjct: 189 LTGFKPSAWRVSMTGVLPLSANLDSIGPIAASVRCCAELDAVLSGDGSPVPEALPLRGLR 248
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFH 287
L +P + + K F V + + G D +P
Sbjct: 249 --------------LAVPTTLALDAMEKHVADSFAAAVARLKEAGAMVDEIAIPEFAELG 294
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
N K + + + H + I DP + + I ++S + R
Sbjct: 295 NINS--KGGFTAAEAWAW---HRDLIARAGKRYDPRVVSRIMRGQDMSAADYLDLLDARE 349
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQV 404
+A+ + L+ PTT P + E Y +L ++ + C +
Sbjct: 350 AWVAAVDRRIAGYDALIMPTTPIVAPAVADLAASDEAYYAANGLILRNPTLINFLDGCAL 409
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLL 431
++P P + +G DR +L
Sbjct: 410 SLPCHAQGTAPVGLMIAGSNGADRRIL 436
>gi|359796667|ref|ZP_09299262.1| amidase [Achromobacter arsenitoxydans SY8]
gi|359365414|gb|EHK67116.1| amidase [Achromobacter arsenitoxydans SY8]
Length = 449
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 173/399 (43%), Gaps = 41/399 (10%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWART-HSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
GL ++ DLFDIEG T G AR A + VV L+ GA IG+T + EFAY
Sbjct: 71 GLPISIKDLFDIEGETTMAG--SVAREGEPVADENAEVVQRLIAAGAVIIGRTNMTEFAY 128
Query: 119 SINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
S G N HY TP NP A ++PGGSSSGAAV+VA + +G DT G VR+P+A CG
Sbjct: 129 SGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAALCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV--------GHVLLQLPFAAQR 228
+ GF+PS VS G++P+S +LD++G A + + G V LP R
Sbjct: 189 LTGFKPSAWRVSMKGVLPLSANLDSIGPIAASVRCCAELDAILSGDGGPVPQPLPVRGLR 248
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFH 287
L IP + + K F V + ++ G D ++P
Sbjct: 249 --------------LAIPTKLALDAMDKHVSDTFAAAVQRLQDAGALVDRIEIPEFAELA 294
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
N K + + + H + I DP + + I +++ + R
Sbjct: 295 AINS--KGGFTAAEAWAW---HRDLIARAGKRYDPRVVSRIMRGQDMTAADYLDLLDARE 349
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCCQ 403
+A+ + L+ PTT P + + S+D A L+ ++ + C
Sbjct: 350 AWVAAVDHRIAGYDALIMPTTPIVAPAVADLQA-SDDAYYAANGLILRNPTLINFLDGCA 408
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLD---TVQNMYA 439
+++P P + +G DR +L V+++YA
Sbjct: 409 LSLPCHAPGSAPVGLMIAGSNGADRRILGIGLAVEDLYA 447
>gi|312960888|ref|ZP_07775393.1| pyrazinamidase/nicotinamidase [Pseudomonas fluorescens WH6]
gi|311284546|gb|EFQ63122.1| pyrazinamidase/nicotinamidase [Pseudomonas fluorescens WH6]
Length = 366
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 95/154 (61%), Gaps = 11/154 (7%)
Query: 60 GLSFAVSDLFDIEGYVT-----GFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
G + A+ D D+ G+ T F H A+ H+ TVV L++ G IGKTV+
Sbjct: 14 GRTVAIKDSLDVAGWPTRCGSRAFEHAPPAQDHA------TVVEALLDDGWQIIGKTVLH 67
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A+ + G N+ TP NP AP ++PGGSSSG+AV VA VD +LG DT G VR+P+A
Sbjct: 68 ELAFGVTGINEWAGTPVNPQAPDRIPGGSSSGSAVIVAQGNVDVALGTDTGGSVRMPAAC 127
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
CG+LG +PS+G +S G+ P S+SLD VG ARD
Sbjct: 128 CGVLGLKPSFGRLSRHGVYPASSSLDVVGPMARD 161
>gi|311106567|ref|YP_003979420.1| amidase [Achromobacter xylosoxidans A8]
gi|310761256|gb|ADP16705.1| amidase family protein 10 [Achromobacter xylosoxidans A8]
Length = 449
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 177/398 (44%), Gaps = 35/398 (8%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWART-HSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
+ GL ++ DLFDIEG T G AR AA + VV LV GA IG+T + EF
Sbjct: 69 IEGLPISIKDLFDIEGETTMAG--SVAREGEPAADADAEVVRRLVAAGAVIIGRTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N HY TP NP A ++PGGSSSGAAV+VA + ++G DT G VR+P+A
Sbjct: 127 AYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAAAAIGSDTGGSVRIPAAL 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ----LPFAAQ-RS 229
CG+ GF+PS VS G++P+S +LD++G A + + +L +P AA R
Sbjct: 187 CGLTGFKPSAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAILSGDGGPVPEAAALRG 246
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R L IP + + K F V + ++ G + +P
Sbjct: 247 LR-----------LAIPTTLALDAMDKHVADSFAAAVSRLKDAGALVEEIAIPEFAELAA 295
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + + + H + I DP + + I ++S + R
Sbjct: 296 INA--KGGFTAAEAWAW---HRDLIARAGKRYDPRVVSRIMRGKDMSAADYLDLLDAREA 350
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCCQV 404
+A+ + L+ PTT P + + S+D A L+ ++ + C +
Sbjct: 351 WVAAVDRRIAGYDALIMPTTPIVAPAVADLQA-SDDAYYAANGLILRNPTLINFLDGCAL 409
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLD---TVQNMYA 439
++P P + +G DR +L V+ +YA
Sbjct: 410 SLPCHASGTAPVGLMIAGSNGTDRRILSIGLAVEALYA 447
>gi|293605663|ref|ZP_06688042.1| amidase [Achromobacter piechaudii ATCC 43553]
gi|292815947|gb|EFF75049.1| amidase [Achromobacter piechaudii ATCC 43553]
Length = 449
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 170/383 (44%), Gaps = 28/383 (7%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWART-HSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
GL ++ DLFDIEG T G AR AA + VV L+ GA IG+T + EFAY
Sbjct: 71 GLPISIKDLFDIEGETTMAG--SVAREGEPAAEENAEVVQRLIAAGAVIIGRTNMTEFAY 128
Query: 119 SINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
S G N HY TP NP A ++PGGSSSGAAV+VA + +G DT G VR+P+A CG
Sbjct: 129 SGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAALCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQRSPRQII 234
+ GF+PS VS G++P+S +LD++G A + + +L P S R +
Sbjct: 189 LTGFKPSAWRVSMTGVLPLSANLDSIGPIAASVRCCAELDAILSGDGGPVPEAMSLRGLR 248
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKTNGEL 293
+A +P + + K F V K ++ G D +P N
Sbjct: 249 LA--------VPTTLALDAMDKHVADTFAATVAKLKDAGALVDEIAIPEFAELGSINS-- 298
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
K + + + H + I DP + + I ++S + R +A+
Sbjct: 299 KGGFTAAEAWAW---HRDLIARAGKRYDPRVVSRIMRGQDMSAADYLDLLDAREAWVAAV 355
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSGCCQVTVPL 408
+ L+ PTT P + ++++ D A + L ++ + C +++P
Sbjct: 356 DHRIAGYDALIMPTTPIVAPAV--ADLVASDEAYYAANGLILRNPTLINFLDGCALSLPC 413
Query: 409 GYYDKCPTSVSFIARHGGDRFLL 431
P + +G DR +L
Sbjct: 414 QAAGTAPVGLMISGSNGADRRIL 436
>gi|300692394|ref|YP_003753389.1| glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum PSI07]
gi|299079454|emb|CBJ52129.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum PSI07]
Length = 448
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 178/403 (44%), Gaps = 39/403 (9%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G VT G A AA+ +T V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVTAAGSRALAH-QPAATSDATAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+PSAF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-------QLPFAAQ 227
C + GF+P+ V G +P+STSLD+ G A V VL +P A
Sbjct: 189 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQTLDTDAVPLAGL 248
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE---YFDSKVPSLK 284
R L + D V + + F R V + E+ G FD P L
Sbjct: 249 R--------------LGLTRDYVGADLDDTVTTAFERAVARLEHAGARIVRFD--FPELL 292
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS 344
+ NG + E H + + D ++A I ++S + +
Sbjct: 293 RLPEINGGGG-----LPAAEAWAWHRPHLARAEAQYDHRVAARIRRGEQMSAAAYLDVMA 347
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLL----SIASVS 399
R M +A L + + PT A PP++ E ++D Q RA +L+ S+ +
Sbjct: 348 ARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLE--ADDAQFFRANALVLRNPSVINFL 405
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +T+P+ + P +S D +L + + A+L+
Sbjct: 406 DGCALTLPVHAAGELPVGLSLCGLAEDDARILRVGRAVEAALR 448
>gi|408784981|ref|ZP_11196730.1| hypothetical protein C241_00899 [Rhizobium lupini HPC(L)]
gi|408489113|gb|EKJ97418.1| hypothetical protein C241_00899 [Rhizobium lupini HPC(L)]
Length = 452
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG VT G A ASR + VV+ L + G CIG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLA-DDEPASRDADVVTALKQAGMICIGRTNMSEFA 128
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 129 FSGLGINPHYGTPRNPLSTDGHRLPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G++ S G S G+ P++ SLD++G R
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTR 220
>gi|293394591|ref|ZP_06638885.1| amidase [Serratia odorifera DSM 4582]
gi|291422900|gb|EFE96135.1| amidase [Serratia odorifera DSM 4582]
Length = 449
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 169/369 (45%), Gaps = 33/369 (8%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+A PL G+ ++ DLFD+ G T G + A R + VV+ L++ G +GKT
Sbjct: 65 QALSPLDGVPVSIKDLFDVAGEAT-TGGSRVLTDAAPAQRHAAVVARLLQAGVVIVGKTN 123
Query: 113 VDEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFAYS G N HY TP NP A ++PGGSSSGAAVAVA + ++G DT G VR+
Sbjct: 124 MTEFAYSGLGINPHYATPANPWQRAARRIPGGSSSGAAVAVADGMGFGAIGSDTGGSVRI 183
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ-------LP 223
P+AFCG+ G++PS + G+ P+S SLD+VG A + + + LP
Sbjct: 184 PAAFCGLTGYKPSACRIDMAGVQPLSPSLDSVGVIAHGVADCVALDAAIAERALEPQTLP 243
Query: 224 FAAQR-SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS 282
A R + Q ++ DD + + DR +Q R L + S+
Sbjct: 244 LAQARFAVPQTLVLDDLDDAVATAFDRALQ-----------RLTLAGARIDALPCSEFAE 292
Query: 283 LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
L + + G ++ +++ H I S DP + + I + E +
Sbjct: 293 LAAINASGG-----FTALESWQW---HQTLIASQAADYDPRVLSRIRRGATLGEGDRQRL 344
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPP---KLGGKEMLSEDYQNRAFSLLSIASVS 399
+ R + + +++ L+ L+ P+ + P +L E L A S+ +
Sbjct: 345 QQQRGDWQRRVAATLEGYDALLMPSVPFIAPTIAELEADEALYFRVNGAALRNPSVINFL 404
Query: 400 GCCQVTVPL 408
C V++P+
Sbjct: 405 DGCAVSLPM 413
>gi|344167864|emb|CCA80112.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [blood
disease bacterium R229]
Length = 448
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 178/403 (44%), Gaps = 39/403 (9%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G VT G A AA+ +T V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVTAAGSRALAH-QPAATSDATAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+PSAF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-------QLPFAAQ 227
C + GF+P+ V G +P+STSLD+ G A V VL +P A
Sbjct: 189 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQTLDTDAVPLAGL 248
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE---YFDSKVPSLK 284
R L + D V + + F R V + E+ G FD P L
Sbjct: 249 R--------------LGLTRDYVGADLDDTVTTAFERAVARLEHAGARIVRFD--FPELL 292
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS 344
+ NG + E H + + D ++A I ++S + +
Sbjct: 293 RLPEINGGGG-----LPAAEAWAWHRPHLARAEAQYDHRVAARIRRGEQMSAAAYLDVMA 347
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLL----SIASVS 399
R M +A L + + PT A PP++ E ++D Q RA +L+ S+ +
Sbjct: 348 ARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLE--ADDAQFFRANALVLRNPSVINFL 405
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +T+P+ + P +S D +L + + A+L+
Sbjct: 406 DGCALTLPVHAAGELPVGLSLCGLAEDDARILRVGRAVEAALR 448
>gi|299067850|emb|CBJ39061.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum CMR15]
Length = 448
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 176/401 (43%), Gaps = 35/401 (8%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G VT G A +A S +T V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVTAAGSRALAHQRAATS-DATAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+P+AF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-------QLPFAAQ 227
C + GF+P+ V G +P+STSLD+ G A V VL +P A
Sbjct: 189 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGL 248
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGF 286
R L + D V + + F R V + E G + + P L
Sbjct: 249 R--------------LGLTRDYVAADLDDTVATAFARAVARLERAGAHIVRFEFPELLQL 294
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
+ NG + E H + + D ++ I ++S + + R
Sbjct: 295 PEINGGGG-----LPAAEAWAWHRPHLARAEAQYDRRVATRIRRGEQMSAAAYLDVMAAR 349
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED---YQNRAFSLLSIASVS--GC 401
M +A L + + PT A PP++ E ++D ++ A L + ++++
Sbjct: 350 EHMIAAARKRLGNLDAWLMPTVAVVPPEVAPLE--ADDARFFRTNALVLRNPSAINFLDG 407
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +T+P+ + P +S D +L + + A+L+
Sbjct: 408 CALTLPIHAAGELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|27378071|ref|NP_769600.1| amidase [Bradyrhizobium japonicum USDA 110]
gi|27351217|dbj|BAC48225.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium
japonicum USDA 110]
Length = 449
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 180/405 (44%), Gaps = 39/405 (9%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP G+ ++ DLFDI+G VT G + AA + V L + G IG+T +
Sbjct: 67 APSRYAGIPISIKDLFDIKGQVTRAGSRALDDS-PAAEHDAATVERLRKAGFVLIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP A +PGGSSSGAAV+V + +LG DT G R+P
Sbjct: 126 TEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+AF GI+G++P+ V G +P+S SLD++G AR + VL P A R PR
Sbjct: 186 AAFNGIVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLANEPVVALR-PR 244
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ L +P + + K+ + F R + + G + + FH
Sbjct: 245 PVK-----GMRLAVPTTIALDDLDKAVAETFERALKTLADHGAIIERI--EMAEFHDIGP 297
Query: 292 -ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRNE 348
K + Y + H I + DP +S I GE ++ + + NE
Sbjct: 298 MNAKGGFAASESYAW---HRYLITTKGDVYDPRVSVRIMRGEAQSAADYI-----DLLNE 349
Query: 349 MRSAISSL---LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC---- 401
RS I+ + + LV PTTA PPK+ L++D +AF+ ++ ++ C
Sbjct: 350 RRSLIARVNAHIAPYDALVLPTTANTPPKIAD---LADD---KAFTTQNLRALRNCTLIN 403
Query: 402 ----CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +++P P + G DR + + M A ++
Sbjct: 404 MIDGCAISLPAHREGDVPVGLMLAGAGGSDRRIFELAAGMEAVIR 448
>gi|418298732|ref|ZP_12910569.1| hypothetical protein ATCR1_14441 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355536058|gb|EHH05337.1| hypothetical protein ATCR1_14441 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 452
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 173/391 (44%), Gaps = 37/391 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG T G A + ASR + VV+ L + G CIG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGMATTAGSTVLA-DDAPASRDADVVTALKQAGMICIGRTNMSEFA 128
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NPA+ ++PGGSSSGA V VAA LV ++G DT G VR+P+AF
Sbjct: 129 FSGLGINPHYGTPRNPASKDGHRLPGGSSSGAGVTVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA-AQRSP---R 231
G++G++ S G S G+ P++ SLD++G + V + A QR+P
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTHTVQDAVWVDAAMRGKAAADVQRAPLAGL 248
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLF--GRQVLKHE--NLGEYFDSKVPSLKGFH 287
+++ + F D V ++ E+L G V + E FD
Sbjct: 249 SLVVPETVF--FDGIEDGVAAAFEQAVERLVRAGASVRRQAFPIFSELFD--------LI 298
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPA-LDPDISAEIGEMLEISETVIENCKSIR 346
K G L E H +E V A +DP + A IS R
Sbjct: 299 KEKGALVTA-------EAFTLHKTRLEGVDAARMDPRVVARTRLGANISMPDYIAIIEAR 351
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED-----YQNRAFSLLSIASVSGC 401
M +A S ++ +LV+PT + K+ +L D + I +
Sbjct: 352 ERMTAAFSGMIGRQELLVSPTLPHVAAKV--APLLDNDDAFFAMNAKTLRNTQIGNFFDL 409
Query: 402 CQVTVPLGYYD-KCPTSVSFIARHGGDRFLL 431
C V++P G + P + HG D +L
Sbjct: 410 CGVSIPCGTGEADMPVGLLLSGLHGSDDHVL 440
>gi|424908949|ref|ZP_18332326.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392844980|gb|EJA97502.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 452
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG VT G A ASR + VV+ L + G CIG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLA-DDEPASRDADVVTALKQAGMICIGRTNMSEFA 128
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 129 FSGLGINPHYGTPRNPLSTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G++ S G S G+ P++ SLD++G R
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTR 220
>gi|417862463|ref|ZP_12507516.1| hypothetical protein Agau_L300599 [Agrobacterium tumefaciens F2]
gi|338820867|gb|EGP54838.1| hypothetical protein Agau_L300599 [Agrobacterium tumefaciens F2]
Length = 452
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 171/385 (44%), Gaps = 25/385 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG T G + + ASR + VV+ L E G IG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGMATTAGSTVLS-NDAPASRDADVVTALKEAGMISIGRTNMSEFA 128
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 129 FSGLGINPHYGTPRNPVSKDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G++G++ S G S G+ P++ SLD++G + R V + RS I
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLG------PLTRTVQDAIWVDAAMRGRSAADIAR 242
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
A L +P + + F + V + G + L F + +K
Sbjct: 243 APLSGLSLVVPETVFFDGIEEGVAVAFEQAVERLARAGASVRRQAFPL--FSELFDLIKE 300
Query: 296 VMRLIQRYEFKNNHNEWIESVKPA-LDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
L+ F H +ES A +DP + A IS R M +A S
Sbjct: 301 KGALVTAEAFA-LHKARLESADAARMDPRVVARTRLGANISMPDYIGILEARESMTAAFS 359
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSL-------LSIASVSGCCQVTVP 407
++ D +LV+PT P + K D + F++ I + C V++P
Sbjct: 360 GMIGKDELLVSPTL----PHVAAKVAPLIDSDDAFFAMNAKTLRNTQIGNFFDLCGVSIP 415
Query: 408 LGYYDK-CPTSVSFIARHGGDRFLL 431
G + P + HG D +L
Sbjct: 416 CGTGEAGMPVGLLLSGLHGSDDHVL 440
>gi|85716667|ref|ZP_01047636.1| amidase [Nitrobacter sp. Nb-311A]
gi|85696507|gb|EAQ34396.1| amidase [Nitrobacter sp. Nb-311A]
Length = 449
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 178/391 (45%), Gaps = 31/391 (7%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFD+EG V+ G + A++ + VV+ L G IG+T +
Sbjct: 67 APSPYAGIPVSIKDLFDVEGQVSRAGSLTL-KDAPPAAKDAPVVARLRRAGFVVIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP NP +PGGSSSGAAV++ + +LG DT G R+P
Sbjct: 126 TEFAYSGLGINPHYGTPKNPWRRDIGYVPGGSSSGAAVSITDGMAYGALGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A+CGI+G++P+ V G IP+S +LD+ G AR + VL P A Q PR
Sbjct: 186 AAYCGIVGYKPTARRVPLDGGIPLSVTLDSYGPIARSVGCCAVLDAVLTGEPIA-QVVPR 244
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKTN 290
+ L +P ++ + + + F R + + + G D VP
Sbjct: 245 PVR-----GLRLAVPTTVMLDDLNPAVARAFERALDRLADAGALIDHIAVPEF------- 292
Query: 291 GELK--NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIR 346
GE+ NV E H I DP + + I GE L ++ V + +IR
Sbjct: 293 GEVAALNVGGGFAAAESWAWHRALIAEKAELYDPRVLSRIRRGESLSAADYV--DLLTIR 350
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVS-----GC 401
+ + + L+ PT A PP + L++D ++LS+ + S
Sbjct: 351 RPIIAGFERRVAPYDALIAPTVAITPPVMAD---LADDAAYVKANMLSLRNCSLINILDG 407
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
C +++P + P + A G DR + +
Sbjct: 408 CAISLPCHREGEPPVGLMLAAAGGSDRRIFE 438
>gi|158425811|ref|YP_001527103.1| amidase [Azorhizobium caulinodans ORS 571]
gi|158332700|dbj|BAF90185.1| putative Glu-tRNA amidotransferase [Azorhizobium caulinodans ORS
571]
Length = 449
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 169/397 (42%), Gaps = 28/397 (7%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ A+ DLFD+ G VT G A +++ A+ +T V+ L G IG++ +
Sbjct: 66 APSPFAGIPVAIKDLFDVAGEVTTSGSKVLA-SNTPATADATAVARLRNAGFVVIGRSNM 124
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP +P ++PGGS+SG AVAVA +LG DT G R+P
Sbjct: 125 VEFAYSGLGLNPHYGTPKSPWKRDEGRVPGGSTSGGAVAVADGFAHLALGTDTGGSCRIP 184
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+AFCGI G++P+ V G +P+S SLD++G R +L P A
Sbjct: 185 AAFCGITGYKPTASRVPQEGCLPLSQSLDSIGPLGRSVACCAAADAILAGAPVTALEP-- 242
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG-EYFDSKVPSLKGFHKTN 290
AD +PA + + F V + G + VP N
Sbjct: 243 ----ADLSGLRFLVPATVALDALDPEVASAFEAAVARISKAGARIVTAPVPEFAEIAGIN 298
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
K + Y + H + + DP +S I E + + R +
Sbjct: 299 A--KGGFTAAESYAW---HRALLAEKEAEYDPRVSVRIKRGREQEAADYIDILAARRSLI 353
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC--------C 402
+ ++ + L+ PT A PPK+ ++ S+D A++ +I S+ C C
Sbjct: 354 ARANARIAPFDALLMPTVAILPPKI--ADLASDDA---AYAKANILSLRNCTLVNMIDGC 408
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
+++P+ P + A G D L + A
Sbjct: 409 AISLPIPAPGDAPVGLMVAAAGGMDARLFAVAAGIEA 445
>gi|157372138|ref|YP_001480127.1| amidase [Serratia proteamaculans 568]
gi|157323902|gb|ABV42999.1| Amidase [Serratia proteamaculans 568]
Length = 449
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DLFD+ G T G A A+ + VV+ L++ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGSRVLADA-PVANNHAAVVAQLLQAGAVVIGKTNMTEFA 128
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP ++PGGSSSGAAVAVA + ++G DT G VR+P+AFC
Sbjct: 129 YSGLGINPHYGTPANPWDRPAGRIPGGSSSGAAVAVADGMCFGAIGSDTGGSVRIPAAFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQR 228
G+ G++P+ +S G++P+S SLD++G A D + V+ Q P Q+
Sbjct: 189 GLTGYKPTARRISSRGLLPLSPSLDSIGVIAHDVAGCIALDTVIAQQPLHPQQ 241
>gi|452130268|ref|ZP_21942840.1| amidase [Bordetella holmesii H558]
gi|451920193|gb|EMD70339.1| amidase [Bordetella holmesii H558]
Length = 451
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 168/391 (42%), Gaps = 38/391 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWART-HSAASRTSTVVSTLVEGGATCIGKTVVDE 115
P+ GL ++ DLFD+ G T G AR A+ S VV LV GA +GKT + E
Sbjct: 68 PIDGLPISIKDLFDVRGQTTMAG--SIAREGEPPATADSDVVCRLVAAGAVIVGKTNMSE 125
Query: 116 FAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FAYS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A
Sbjct: 126 FAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSVRIPAA 185
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
CG+ GF+PS VS G +P+STSLD++G A + VL
Sbjct: 186 LCGLAGFKPSAWRVSMAGALPLSTSLDSIGPLASSVACCATLDAVLAD----------DT 235
Query: 234 IIADDCFEL----LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
+ D L L +P V+ V + + F + G + VP +
Sbjct: 236 ALPADALPLRGLRLALPTAIVLDDVDDTVAQAFDAALSTLSAAGALIERIDVPEFAQLAQ 295
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + Y + H + DP + A I +++ + S R
Sbjct: 296 INA--KGGFTASEAYAW---HRSLLARKGDRYDPRVIARILRGKDMTAADYIDLLSARQI 350
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC------- 401
+ + + + LV PT P + E N AF+ +++ + C
Sbjct: 351 WVAGVDARIAHYDALVLPTVPQVAPAIAPLEA-----SNEAFTRMNLTMLRNCTLINFLD 405
Query: 402 -CQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
C +++P + P + + +G DR +L
Sbjct: 406 GCALSLPCQAPGEAPVGLMIASSNGNDRRVL 436
>gi|86136120|ref|ZP_01054699.1| amidase family protein [Roseobacter sp. MED193]
gi|85826994|gb|EAQ47190.1| amidase family protein [Roseobacter sp. MED193]
Length = 423
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 175/385 (45%), Gaps = 31/385 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFG----HPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
PL G AV DI+G + G PE A++ + +V+ + G IG T
Sbjct: 48 PLDGQFLAVKANIDIQGLRSHSGSRLYRPEPAQSDAP------IVARMRAAGLIVIGHTN 101
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+ EFA+S G N H+ TP N +PGGSSSG+A AVA L D +LG DT G VR+P+
Sbjct: 102 MSEFAFSGLGLNPHFGTPPNALRQDLVPGGSSSGSATAVALGLADLALGTDTSGSVRIPA 161
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A GI+GFRPS G +GI P++ SLDT G AR + +R + +L + Q R
Sbjct: 162 ACQGIIGFRPSIGRYDDIGIFPLAPSLDTPGPLARRVESIRSLDSLLTRDRNPGQNCKRI 221
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
I + + + + ++V++ Q+ E FD +V ++ F + N
Sbjct: 222 ICLDEKSLDDYAPEIGAMYRIVVE--------QLADTE-----FDLEVRTIHSFARVNDL 268
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
L+ ++ N +++ ALDP + + IS+ + + R M
Sbjct: 269 FHTHGTLVGAEAYRLLKN-VVQADHIALDPRVRDRLSHSATISDENMRTLLAARRMMIET 327
Query: 353 ISSLLKDDGILVTPTTAYPPPKLG---GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
+ L+ G+L+ PT PPP + G + S+ A+ +T+P+G
Sbjct: 328 FEAELQ-GGMLLYPTLPSPPPSIQDVIGDPTIFARENAHILSVSMKAAFLNAPTITLPVG 386
Query: 410 Y-YDKCPTSVSFIARHGGDRFLLDT 433
C S+S + G D+ LL T
Sbjct: 387 SGVPGC--SLSLTSSTGADKDLLTT 409
>gi|146303538|ref|YP_001190854.1| amidase [Metallosphaera sedula DSM 5348]
gi|145701788|gb|ABP94930.1| Amidase [Metallosphaera sedula DSM 5348]
Length = 388
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 166/367 (45%), Gaps = 38/367 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTGL+F V D+ + G T G + R + +V ++ G T +GKT EF
Sbjct: 27 PLTGLTFGVKDVIETSGVRTTAG--SRILLDNVPKRNALIVDRILSMGGTILGKTNTHEF 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A T+ NP ++ GGSS G+AVAVA ++VD +G DT G VR+P++ CG
Sbjct: 85 AVGATNTSSVAGPARNPRDRDRISGGSSGGSAVAVALNMVDVGVGTDTGGSVRIPASLCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQRSPRQ-- 232
++GF+PSYG G+IP S SLDT+G+ RD + L V L + A RSPR
Sbjct: 145 VIGFKPSYGLFPMSGVIPFSWSLDTLGFLTRDHETLWRVLVALTPAEGKKAYVRSPRTRP 204
Query: 233 ---IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP-SLKGFHK 288
+ + DD ST+ L E EYF P +L +
Sbjct: 205 RVGVFLFDD------------------STKDLL-------EKAMEYFPQARPVNLPNMIR 239
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
+ R+I E + H W+ S + PD+ + L IS N +R
Sbjct: 240 YG---RWARRVIATSEGASYHLTWLRSKEEMYFPDVRDILKSGLSISAVDYVNALRLRKL 296
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+ S+ KD ++++PTT P PK+ + ++++ + + ++ G +++P
Sbjct: 297 ILEEYMSVFKDVDVILSPTTRIPAPKISEVQGREKEFREDLVANTELFNLVGAPSISIPF 356
Query: 409 GYYDKCP 415
D P
Sbjct: 357 FERDGLP 363
>gi|218671321|ref|ZP_03520991.1| amidase [Rhizobium etli GR56]
Length = 182
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 95/148 (64%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+GL AV DLFD+ GY T G+ + T+ +V TL++ GA +GKT DE A
Sbjct: 16 LSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTATAPLVQTLLDAGACFVGKTNTDELA 75
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
YS+ G N H+ P NP P+ +PGGSSSG+AVAVAA L D LG DT G +R+P+A G+
Sbjct: 76 YSLIGGNIHFGMPRNPRDPNLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAINGL 135
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWF 205
+G+RP++G++ + + P++ S D G+
Sbjct: 136 IGWRPTHGSLDNRAVRPLAPSFDVPGFM 163
>gi|163796327|ref|ZP_02190288.1| Amidase [alpha proteobacterium BAL199]
gi|159178469|gb|EDP63011.1| Amidase [alpha proteobacterium BAL199]
Length = 451
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 168/385 (43%), Gaps = 20/385 (5%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP PL GL ++ DLFD+ G+VT G A A + +V+ L GA +G+T +
Sbjct: 69 APRPLEGLPISIKDLFDVRGHVTTAGSKVLA-DEPPAEVDAPIVARLRAAGAVLVGRTNM 127
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFA+S G N H TP NP ++PGGSSSGAAV+VA + +G DT G VR+P
Sbjct: 128 TEFAFSGIGINPHNGTPANPWDRDTRRIPGGSSSGAAVSVADGMATVGIGSDTGGSVRIP 187
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF--AAQRS 229
S CG+ GF+P+ V +G +S +LD++G A V V+ P +RS
Sbjct: 188 SGLCGLAGFKPTQRRVPTVGACALSPTLDSIGPLAPTVACAARVHQVMAGEPVRPIGRRS 247
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
+ A +P V++ + +T + F + + G +++P + +
Sbjct: 248 VAGLRFA--------VPQSLVLEDLDGTTAQCFEAALSRLSAAGAVI-TEIPFKELLAIS 298
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
K ++ YE + H + DP + I E S R E+
Sbjct: 299 EANAKGGFAAVECYELHSRH---VIRAPDLFDPRVVVRIRRAGEQSAVDYITLVRRRAEI 355
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC---CQVTV 406
++A +++ ++ PTTA P + E E + +L SV C TV
Sbjct: 356 QAACNAVTAPFDAVLMPTTARIAPPIAELEASDEAFAKNNILMLRNCSVGNFLDRCAATV 415
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLL 431
P+ P + + GD LL
Sbjct: 416 PVQEPGSAPVGLMLMGETMGDDALL 440
>gi|374577275|ref|ZP_09650371.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
gi|374425596|gb|EHR05129.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
Length = 478
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 175/404 (43%), Gaps = 58/404 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL F+V D D+ G T PE+A T A TS VV+ + GA +GKT +D+F
Sbjct: 85 PLYGLVFSVKDCIDVAGEQTTSACPEFAYT---AKDTSPVVADAIAAGAIYLGKTNMDQF 141
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y NP P +PGGSSSGAAV+VA F+ G DT G RVP+++CG
Sbjct: 142 ATGLVGVRSPYGIARNPHNPDYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASYCG 201
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+P+ GA S G++ S DTV + RDP+ V VL A+R A
Sbjct: 202 VTGFKPAPGAFSQRGMVYACRSFDTVSLYTRDPRDGHDVYRVL------ARRD------A 249
Query: 237 DDCF---------------ELLKIPADRVVQVVI---KSTEKLFGRQVLKHENLGEYFDS 278
+DCF L I R Q+ TE LFG + K L D
Sbjct: 250 EDCFSPVDFAGWTEQASPARPLNIATPRPDQLSFFGNAETEALFGDGLRKLRQL----DL 305
Query: 279 KVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALD--PDISAEIGEMLEISE 336
V S+ + + + F E SV LD PD +I L I
Sbjct: 306 SVASV--------DFAPFISVNDLMFFGPFLAERDVSVGAFLDANPDAGVKIVRDLVIGS 357
Query: 337 TVIENCKSIR-----NEMRSAISSLLKDDGILVTPT--TAYPPPKLGGKEMLSEDYQNRA 389
+ R E++ ++ +D LV PT T + ++ L+ ++ N
Sbjct: 358 RKFTAADAYRALYKVKEVQRSLRDFWQDHDALVVPTVGTVLSIDDV-ARDPLTANFNNGY 416
Query: 390 FSLLSIASVSGCCQVTVPLGYYDK-CPTSVSFIARHGGDRFLLD 432
++ + A+ G + VP P V+F+A G +R L D
Sbjct: 417 YT--NYANPLGLAAIAVPNAVTAAGVPYGVTFLAPAGRERLLTD 458
>gi|239820716|ref|YP_002947901.1| Amidase [Variovorax paradoxus S110]
gi|239805569|gb|ACS22635.1| Amidase [Variovorax paradoxus S110]
Length = 458
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 181/398 (45%), Gaps = 40/398 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ DL +I+G T G P + + A + + +V + + G +GKT + +F
Sbjct: 77 PLHGIPLALKDLVNIQGKPTTAGSPLL--SANIAQQDAAIVRRIADAGGVIVGKTHMVQF 134
Query: 117 AYSINGTNKHYDTPTNPAAPSQ---MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
A GTN H TP NPA + + GGSSSG+AVAVAA LV +++G DT G VRVP+A
Sbjct: 135 ALGAWGTNTHMGTPRNPAGRATDMLVAGGSSSGSAVAVAAHLVPWAIGSDTGGSVRVPAA 194
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCGI+GF+P+ A+ G+ +S SLD+VG A + R L P + + R+I
Sbjct: 195 FCGIVGFKPTIDALPREGVYALSESLDSVGLLASSVQDARLCFEALADAPGSGADARRRI 254
Query: 234 II--ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ AD+ L A VQ + + + F S VP F +
Sbjct: 255 GVLEADELAPLAPAVARCQVQCLQRLEQAGF---------------SLVPFR--FPASLA 297
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
K I E ++ +++ +DP + + + + ++ + +
Sbjct: 298 AFKEPTNAIMIAEGAWVNDRFLDDPDAPMDPSVRSRLVAARATTAVQYLQAQATASRWQQ 357
Query: 352 AISSLLKDDGI--LVTPTTAYPPPKLGGKEMLSED----YQNRAFSLLSIASVSGCCQVT 405
+ + G+ + P TA P+L E + D + R +LL++ C ++
Sbjct: 358 EFAGDMDRLGLSAIAMPVTAMTAPRL---EDVDHDVAPVHFTRPVNLLAL------CGIS 408
Query: 406 VPLGYYDKC-PTSVSFIARHGGDRFLLDTVQNMYASLQ 442
+P G D P + + R G D LL ++ A+L
Sbjct: 409 LPAGEDDDARPIGLQLVGRAGCDHALLGVAADVAAALH 446
>gi|374369303|ref|ZP_09627337.1| amidase [Cupriavidus basilensis OR16]
gi|373099216|gb|EHP40303.1| amidase [Cupriavidus basilensis OR16]
Length = 444
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 155/325 (47%), Gaps = 25/325 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G VT G A + A+ + VV+ L GA IG+T + EF
Sbjct: 71 PLAGLPVSIKDLFDVRGQVTRAGSK--ALGGAPANADAPVVARLRAAGAVLIGRTNMSEF 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP P +++ GGS+SG AV+VA D+ +LG DT G +R+PSAFCG
Sbjct: 129 AFSGLGLNPHYGTPRAPFDEARIAGGSTSGGAVSVALDMAVAALGTDTGGSIRIPSAFCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP----RQ 232
+ GF+P+ V G +P+STSLD+ G AR ++ ++ +P R
Sbjct: 189 LTGFKPTASRVPLAGAVPLSTSLDSAGPLARSVACCAAFDAIVSGETLDSRPAPLAGLRL 248
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
++ D + L + + + +L G +++ E P LK + N
Sbjct: 249 LVTRDFVCDGLDAEVAQAFDATLATLSRL-GARIVTFE---------FPELKRLPQINAG 298
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRNEMR 350
+ E + H + + D ++ I GE L ++ + + R M+
Sbjct: 299 GG-----LTAAEAWHWHQQLLAERGEDYDQRVAMRIRRGEQLGAADYI--ELLAERRAMQ 351
Query: 351 SAISSLLKDDGILVTPTTAYPPPKL 375
+ + LL++ + PT A PP+L
Sbjct: 352 ARAADLLREADAWLMPTVAVRPPRL 376
>gi|115523813|ref|YP_780724.1| amidase [Rhodopseudomonas palustris BisA53]
gi|115517760|gb|ABJ05744.1| Amidase [Rhodopseudomonas palustris BisA53]
Length = 449
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 180/404 (44%), Gaps = 37/404 (9%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP G+ AV DLFDI+G VT G + A + V+ L G IG+T +
Sbjct: 67 APSAFAGIPIAVKDLFDIKGQVTRAGS-RALDDNPRAEADAPAVARLRRAGFVVIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP A +PGGS+SG AVAV + +LG DT G R+P
Sbjct: 126 TEFAYSGIGINPHYGTPKGAWQRAIGHVPGGSTSGGAVAVVDGMAHGALGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA--AQRS 229
+AF G++GF+P+ V G +P+S +LD+VG AR + + VL P A RS
Sbjct: 186 AAFNGLVGFKPTQSRVPRDGAVPLSFTLDSVGPLARSVQCCATLDSVLADQPLAELTPRS 245
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLF-GRQVLKHENLGEYFDSKVPSLKGFHK 288
+ + +A +L D V Q ++ E L +++ + E+ D S KG
Sbjct: 246 VQGMRLAVPTTMVLDDLDDAVAQAFERTLEALSRAGALIERIEVPEFLDVVPMSAKGGFA 305
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIR 346
+ Y + H I + DP + I GE ++ V + S R
Sbjct: 306 A----------AESYAW---HRYLIVAHGDVYDPRVRDRILRGESQSAADYV--DLVSAR 350
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC----- 401
+ ++ L +V PT A PPK+ L++D +AF+ ++ ++ C
Sbjct: 351 KSLVERSTARLSPYDAIVLPTAANTPPKIAD---LADD---KAFTKANLLALRNCTLINM 404
Query: 402 ---CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +++P + P + + G DR + D M A ++
Sbjct: 405 IDGCAISLPCHREGEVPVGLMLASTAGTDRRIFDLAAGMEALIR 448
>gi|398824037|ref|ZP_10582384.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
gi|398225271|gb|EJN11546.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
Length = 449
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 180/402 (44%), Gaps = 33/402 (8%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP G+ ++ DLFDI+G VT G + AA + + V+ L + G IG+T +
Sbjct: 67 APSRYAGIPVSIKDLFDIKGQVTRAGSRALDDS-PAAEQDAATVARLRKAGFVLIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP A +PGGSSSGAAV+V + LG DT G R+P
Sbjct: 126 TEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVFDGMAHGGLGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+AF GI+G++P+ V G +P+S SLD++G AR + VL P A + PR
Sbjct: 186 AAFNGIVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLANEPIVALK-PR 244
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ L +P + + + F R + + G + + FH
Sbjct: 245 PVK-----GMRLAVPTTIALDDLDAEVSETFERALKSLADHGAIIERI--EMAEFHDIGP 297
Query: 292 -ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRNE 348
K + Y + H I S DP +S I GE ++ + + NE
Sbjct: 298 MNAKGGFAASESYAW---HRYLITSKGDVYDPRVSVRILRGEAQSAADYI-----DLLNE 349
Query: 349 MRSAISSL---LKDDGILVTPTTAYPPPKLGGKEMLSED----YQN-RAFSLLSIASVSG 400
RS I+ + + LV PTTA PPK+ L++D QN RA ++ +++
Sbjct: 350 RRSLIARVNARIAPYDALVLPTTANTPPKIAD---LADDKAFTTQNLRALRNCTLINMTD 406
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +++P + P + G DR + + M A ++
Sbjct: 407 GCAISLPAHREGEIPVGLMLAGAGGSDRRIFELAAGMEAVIR 448
>gi|254473871|ref|ZP_05087265.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudovibrio sp.
JE062]
gi|211956981|gb|EEA92187.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudovibrio sp.
JE062]
Length = 417
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 170/381 (44%), Gaps = 23/381 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G++ ++ DLFD G VT G + R + A + VVS L GA G+T + E
Sbjct: 39 PLHGVAVSLKDLFDEFGIVTSAGS-SFLRNRAPACEDAKVVSALKAAGAFTCGRTNMSEL 97
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N H+ +P N ++PGGSSSGA +V L D +L DT G VR+P+A
Sbjct: 98 AFTGLGLNPHFGSPENILDALRIPGGSSSGAMASVGLGLCDAALATDTGGSVRIPAALNS 157
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+P+ A+S G+ I S DTVG+ AR + + VL PR+I
Sbjct: 158 LYGFKPTRAAISTKGVFSICPSFDTVGFIARSLHMCTRLHAVLSGQCLV----PRKISSL 213
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D + + A + + + F R +L + G + V H T
Sbjct: 214 DGLH--VGLVASPLAEGLDTQVSADFDRAMLAIRDAGAII-APVSEPALCHST-----TC 265
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
+ I YE + ++E +K DP + I + E++ +E +S R E A +
Sbjct: 266 LGTICSYEATALVSGYLEGLKQTADPYVLERILQSAEVTSKEMEEARSKRVEAIRAFKEM 325
Query: 357 LKDDGILVTPTTAYPPPKLGG-----KEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
IL+ PT P L +++ S+ QN ++ V G C VT+P+ Y
Sbjct: 326 AGKFDILIAPTVPIIAPMLSDIDSNLEKIGSQLSQNTR----AVNWVDG-CAVTIPMNTY 380
Query: 412 DKCPTSVSFIARHGGDRFLLD 432
T + R G D +L+
Sbjct: 381 GTPGTGLMLFGRAGSDWHVLE 401
>gi|94496799|ref|ZP_01303374.1| amidase [Sphingomonas sp. SKA58]
gi|94423812|gb|EAT08838.1| amidase [Sphingomonas sp. SKA58]
Length = 432
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P G+ V D FD+ G+ T G R A R + VV L G +G+T + EF
Sbjct: 52 PYLGMPVTVKDNFDLMGHPTTAGS-RLLRDAPVARRDAVVVQRLRAAGFVLLGRTNMTEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQM--PGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+S G N H+ TP NPA P ++ PGGSSSGAAV+VA L ++G DT G +R+P+A
Sbjct: 111 AFSGLGINPHFGTPANPAYPGELRIPGGSSSGAAVSVALGLTRVAVGTDTGGSIRIPAAL 170
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLP 223
CG+ GF+P+ A+S G++P+ST+LD VG R + VL +P
Sbjct: 171 CGVTGFKPTAAAISRDGVLPLSTTLDAVGIIGESAADCRALFDVLRDVP 219
>gi|264680283|ref|YP_003280193.1| amidase [Comamonas testosteroni CNB-2]
gi|262210799|gb|ACY34897.1| Amidase [Comamonas testosteroni CNB-2]
Length = 454
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 179/395 (45%), Gaps = 18/395 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL +V DLFDI G+ T G + A++T+ VV L GA +G T + EF
Sbjct: 69 PLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEF 127
Query: 117 AYSINGTNKHYDTPTNP----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
AYS G N HY TP NP ++PGGSSSGAA++V+ + ++G DT G VR+PS
Sbjct: 128 AYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVSDGMALAAIGSDTGGSVRIPS 187
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A CG+ GF+P+ VS G++P+S +LD++G A + + VL P R+
Sbjct: 188 ALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLAPSVRCCAALDAVLSGEPHGELRA--- 244
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-LKHENLGEYFDSKVPSLKGFHKTNG 291
+ LL +P + V+ + + + + L + + ++ VP + N
Sbjct: 245 --ASLQGLRLL-VPTNVVMDGMDSAVAAAWQHALSLLYAAGVQITEAVVPPFSELAQINA 301
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
K + + + +H + + DP + I +IS + R + +
Sbjct: 302 --KGGFTAAEAWAWHRSHIDGAGRLA-EYDPRVGTRILRGKDISAADYIELLARRQQWIA 358
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPL 408
+ + + D +++ PT PK+ + E Y +L ++ + C V++P
Sbjct: 359 RVQAQMADHDLMLMPTVPVIAPKIAELQASDEAYFAANGLMLRNPTLINFLDGCAVSLPC 418
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
+ P +S G D+ LL + A L +
Sbjct: 419 HRAGEAPVGLSLAGLAGQDQRLLSVALAVEALLAQ 453
>gi|94985452|ref|YP_604816.1| amidase [Deinococcus geothermalis DSM 11300]
gi|94555733|gb|ABF45647.1| Amidase [Deinococcus geothermalis DSM 11300]
Length = 395
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 166/344 (48%), Gaps = 36/344 (10%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT--STVVSTLVEG 103
P PL +A PL GL+F+V DL+ + G+ P A T ++ S +V L+
Sbjct: 19 PASPLLGEASGPLWGLNFSVKDLYGMAGW------PLTASTRASVPDPGESVLVRRLLGL 72
Query: 104 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLV-----DF 158
GA +GKT + E A I G N T +P P+++PGGSSSGAAV+VA V DF
Sbjct: 73 GACAVGKTHLHEIALGITGMNGFGGT-LHPFDPARVPGGSSSGAAVSVALGQVGETKVDF 131
Query: 159 SLGIDTVGGVRVPSAFCGILGFRPSYG--AVSHMGIIPISTSLDTVGWFARDPKILRHVG 216
+LG DT G +RVP+A+CG++G++P+ G A S G++P+ST+ D G ARD + + V
Sbjct: 132 ALGTDTGGSIRVPAAWCGVVGYKPTGGHPAWSTEGVLPLSTTCDHAGPLARDVRTVVRVQ 191
Query: 217 HVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF 276
L P P++ + L DR V+ + +L+ ++ E LG +
Sbjct: 192 EALTGRPVV----PQEWTGVNVGLWLPSGWVDRTVREAV----RLYAARL---EELGAWV 240
Query: 277 DSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISE 336
+ + + E+ + I E H + +E +P P A + + ++E
Sbjct: 241 E---------NVSFPEVLDAYSPIVLSEAARVHRQALEQAEPGFLPFTLAALRQGQALTE 291
Query: 337 TVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
+E R R+ + LL +L+ P PPP +G E+
Sbjct: 292 EEVEAAFDRRAAYRAQLDDLLSRFDVLLAPAVPTPPPLIGQDEV 335
>gi|296534637|ref|ZP_06897042.1| allophanate hydrolase [Roseomonas cervicalis ATCC 49957]
gi|296265025|gb|EFH11245.1| allophanate hydrolase [Roseomonas cervicalis ATCC 49957]
Length = 449
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P +A A R + V LVE GA + KT +D+F
Sbjct: 68 PLWGIPFAVKDNIDVAGMPTSAACPAFAY---APDRDAGAVQRLVEAGAIPMAKTNLDQF 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G + P NP AP ++PGGSSSG+AVAVA L+ FSLG DT G R+P+ CG
Sbjct: 125 ATGLVGVRTPHPVPRNPRAPGRVPGGSSSGSAVAVARGLLPFSLGTDTAGSGRIPAGLCG 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
++G +P+ GAVS G++P SLD V F R
Sbjct: 185 LVGLKPTPGAVSSRGVVPACRSLDCVSLFTR 215
>gi|407769634|ref|ZP_11117008.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407287151|gb|EKF12633.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 426
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 171/383 (44%), Gaps = 17/383 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +V DL+D E VT + + AA+R +++ + GA G+T + EF
Sbjct: 53 PLAGMLVSVKDLYD-EAGVTTTAASKLLQGRPAATRDCEIIARIKAAGAVPFGRTTLSEF 111
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS G N HY TP N P +PGGS+SG ++ VA LVD +LG DT G VR+PSA G
Sbjct: 112 AYSGVGLNPHYGTPGNVFDPEGIPGGSTSGGSLTVALGLVDIALGTDTGGSVRIPSAING 171
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-PRQIII 235
+ G++PS +S GI P++ S DT G A D + V+ AQ P I I
Sbjct: 172 LYGYKPSRLWMSGEGIHPLAKSFDTAGPLAGDLQTAIAAFEVMSGKTVPAQDGKPAPIKI 231
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
+PA V + F K N G + GF N +
Sbjct: 232 G--------VPAHAFVNDLDDRVRADFDAVCKKLANAGHQL---IEIDLGFLAENAVINK 280
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
++ + ++ + + +E+ DP + + +S + + + R ++ + SS
Sbjct: 281 ILVAAEAHKIYSQDFKALETCG---DPRVLNRMRFADTLSAADLIDAYAKRTDVIAMFSS 337
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK-C 414
+ D ++++PT PK+ E + S ++S C +++P+ D
Sbjct: 338 AMADVDVMISPTLPMMAPKIAEVEADFDRLNAMMLRNTSYLNLSDACAISIPVPAGDGVA 397
Query: 415 PTSVSFIARHGGDRFLLDTVQNM 437
P ++ A HG D +L + +
Sbjct: 398 PGALMIAAPHGHDFAVLHAARRI 420
>gi|307730115|ref|YP_003907339.1| amidase [Burkholderia sp. CCGE1003]
gi|307584650|gb|ADN58048.1| Amidase [Burkholderia sp. CCGE1003]
Length = 451
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 188/405 (46%), Gaps = 27/405 (6%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL +V DLFDI+G VT G R + A+R + V+ L E GA +G+T +
Sbjct: 65 PSALAGLPVSVKDLFDIKGQVTTAGS-RVLRDAAPAARDAAAVARLREAGAVFVGRTNMS 123
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP NPA ++ GGSSSGAAV+VA V +LG DT G VR+P+AF
Sbjct: 124 EFAFSGLGLNPHYGTPLNPAHAGRLAGGSSSGAAVSVALGHVVAALGTDTGGSVRIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ GF+P+ V G +P+S S D+VG AR + V+ A +PR +
Sbjct: 184 CGLAGFKPTARRVPLDGAVPLSASFDSVGPIARSVDCCALLDSVISGQ--ALDTAPRPL- 240
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKV-PSL---KGFHKTN 290
L + +D V + ++ F R + G + V P L G H
Sbjct: 241 ----AGLRLGVTSDYVADDLDETVSTAFNRAIGMLRRAGASVERFVFPELYEVAGHHPLA 296
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRNE 348
G + +Q + + H + A DP + + GE ++ I+ +
Sbjct: 297 G-----ITAVQAWAWHRRH---VAREADAYDPRVLKRLRAGEGRSAAD-YIDLLAARERF 347
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVT 405
MR A + L + D L+ PT A PP + + + ++L S+ + C +T
Sbjct: 348 MRDARTRLARFDAWLM-PTVAVVPPAIAQTGSDDDAFFATNATVLRNPSVVNFMDGCALT 406
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATK 450
+P + P +S D +L +++ A L++ AD A +
Sbjct: 407 LPCHREGELPVGLSICGPALADATVLAIGRSVEALLRDSADAAAE 451
>gi|440232242|ref|YP_007346035.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Serratia marcescens FGI94]
gi|440053947|gb|AGB83850.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Serratia marcescens FGI94]
Length = 449
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 25/370 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DLFD+ G T G A AA R + VV L++ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATRGGSRALAHA-PAAQRHAAVVQRLLQAGAVVIGKTNMTEFA 128
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP ++PGGSSSGAAVAV+ + ++G DT G VR+P+AFC
Sbjct: 129 YSGLGINPHYGTPANPWRRQERRIPGGSSSGAAVAVSDGMGFGAIGSDTGGSVRIPAAFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G+ G++PS + G+ P+S SLD+VG A + + ++ Q P P +
Sbjct: 189 GLTGYKPSASRIDMAGVQPLSPSLDSVGVIAHGLEDCIALDALIAQQPLQPLARP----L 244
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS----KVPSLKGFHKTNG 291
A F L P + + + F R + + G D+ + L + + G
Sbjct: 245 AQARFAL---PQTLALDDLDAAVSTAFQRALRQLRQAGAQIDALPCDEFAELAAINASGG 301
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
++ +++ H I A DP + + I + + + R + +
Sbjct: 302 -----FTALESWQW---HQTLIAEQAAAYDPRVLSRIRRGAALGDEDGNRLREQRRDWQR 353
Query: 352 AISSLLKDDGILVTPTTAYPPP---KLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+++ L+ L+ P+ + P +L E L A SI + C V++P+
Sbjct: 354 RVTASLQGYHALLMPSVPFVAPTIAELEADEALYFRINGAALRNPSIINFLDGCAVSLPI 413
Query: 409 GYYDKCPTSV 418
+ P +
Sbjct: 414 QPPGEAPVGL 423
>gi|430810142|ref|ZP_19437257.1| amidase [Cupriavidus sp. HMR-1]
gi|429497376|gb|EKZ95909.1| amidase [Cupriavidus sp. HMR-1]
Length = 440
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 161/360 (44%), Gaps = 24/360 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G VT G + A S V+ L GA IG+T + EF
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGSKAL-DGGAPAQADSPAVARLRAAGAVLIGRTNMSEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP P P ++ GGS+SG AV+VA D+ +LG DT G +R+PSAFCG
Sbjct: 128 AFSGLGLNPHYGTPRTPFDPERVAGGSTSGGAVSVAEDMAVAALGTDTGGSIRIPSAFCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQRSPRQ 232
+ GF+P+ V G +P+STSLD+ G AR + VL L A R R
Sbjct: 188 LTGFKPTARRVPLDGAVPLSTSLDSAGPLARSVACCVAMDAVLSGETLDTRAADLRGLRF 247
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+ D D + V ++ E R + + + P L+ + NG
Sbjct: 248 YVTRD-------FVCDGLDPEVAQAFEAALARLSAQGATIVPF---DFPELRRLPEING- 296
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
+ + + + H + + D ++ I + S + + R M+
Sbjct: 297 -GGGLTAAESWAW---HRTLLAAKGDQYDQRVAQRIRRGEKQSAADYIDLLAARCAMQQR 352
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG---CCQVTVPLG 409
+ LL+D + PT A PP+L E ED+ +L ASV C T+P G
Sbjct: 353 AAVLLRDADAWLMPTVAVRPPRLDALER-DEDFFAVNGLVLRNASVINFLDGCAATLPAG 411
>gi|94310865|ref|YP_584075.1| amidase [Cupriavidus metallidurans CH34]
gi|93354717|gb|ABF08806.1| amidase [Cupriavidus metallidurans CH34]
Length = 440
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 161/360 (44%), Gaps = 24/360 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G VT G + A S V+ L GA IG+T + EF
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGSKAL-DGGAPAQADSPAVARLRAAGAVLIGRTNMSEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP P P ++ GGS+SG AV+VA D+ +LG DT G +R+PSAFCG
Sbjct: 128 AFSGLGLNPHYGTPRTPFDPERVAGGSTSGGAVSVAEDMAVAALGTDTGGSIRIPSAFCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQRSPRQ 232
+ GF+P+ V G +P+STSLD+ G AR + VL L A R R
Sbjct: 188 LTGFKPTARRVPLDGAVPLSTSLDSAGPLARSVACCVAMDAVLSGETLDTRAADLRGLRF 247
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+ D D + V ++ E R + + + P L+ + NG
Sbjct: 248 YVTRD-------FVCDGLDPEVAQTFEAALARLSAQGATIVPF---DFPELRRLPEING- 296
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
+ + + + H + + D ++ I + S + + R M+
Sbjct: 297 -GGGLTAAESWAW---HRTLLAAKGDQYDQRVAQRIRRGEKQSAADYIDLLAARCAMQQR 352
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG---CCQVTVPLG 409
+ LL+D + PT A PP+L E ED+ +L ASV C T+P G
Sbjct: 353 AAVLLRDADAWLMPTVAVRPPRLDALER-DEDFFAVNGLVLRNASVINFLDGCAATLPAG 411
>gi|340516027|gb|EGR46278.1| predicted protein [Trichoderma reesei QM6a]
Length = 718
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 182/403 (45%), Gaps = 29/403 (7%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
P ++ PL G+ FAV D D++G VT R A+ T+ + L++ GA +G
Sbjct: 315 FPDESMPPLFGIPFAVKDNIDVKGVVT---TAACDRFAYTATATAPAIQHLLDAGAIYVG 371
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
K +D+ A + G Y P + + GGSSSG AVAVAA LV F++G DT G VR
Sbjct: 372 KLNLDQLATGLTGCRSPYGIPHSYHSEKHASGGSSSGCAVAVAAGLVSFAIGTDTAGSVR 431
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL----PFA 225
+P+AF GI+GF+P+ G +S G++P SLDT+G FAR + R V +V+ Q P+A
Sbjct: 432 IPAAFNGIVGFKPTKGTISARGVVPACQSLDTMGIFARSVEEARQVWYVMDQYDALDPYA 491
Query: 226 AQRSPRQIIIAD-----DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKV 280
+ D + IP D +++ ++LF V + ++ G
Sbjct: 492 KPPESLPTWMVDYRGPGEGGFTFGIPPDSAIELCSAKYQELFRVAVERLQSCGATLVDI- 550
Query: 281 PSLKGFHKTNGELKNVMRLIQRYEFKNNHN---EWIESVKPALDPDISAEIGEMLEISET 337
F + G+L L+ H+ E IE++ P + L E
Sbjct: 551 -DYTPFAQA-GDLIYGASLVHERLASIGHDFITENIETLHPTTKTVFQGLLSAKLSAWEV 608
Query: 338 VIENCKSIR--NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLLS 394
+ ++ +R L +LV PT + P +E+L + N L +
Sbjct: 609 FRDQATQMQCIAAVRKTFDKLDGGIDVLVVPTAPFHPTI---QEVLDDPLAVNSKLGLFT 665
Query: 395 -IASVSGCCQVTVPLGYYD----KCPTSVSFIARHGGDRFLLD 432
A+V C V+V G+ + + P ++F+A G D LLD
Sbjct: 666 HPANVVDLCGVSVNAGWVEEGEARLPFGITFLAGSGCDGKLLD 708
>gi|197104619|ref|YP_002129996.1| amidase [Phenylobacterium zucineum HLK1]
gi|196478039|gb|ACG77567.1| amidase [Phenylobacterium zucineum HLK1]
Length = 425
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 173/366 (47%), Gaps = 21/366 (5%)
Query: 51 PPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGK 110
PP L G +FA+ DLFD+ G TG G + +R S V L++ G + +GK
Sbjct: 26 PPLLGEDLDGPTFAIKDLFDVAGVPTGGGAQ--VPLDPSPTRHSRAVERLLQAGWSAVGK 83
Query: 111 TVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
T E AY GTN+ P NP P + PGGSSSG+AVAVAA L D +LG DT G V
Sbjct: 84 THTVELAYGGWGTNRAVGAPWNPWDPKVHRAPGGSSSGSAVAVAAGLCDAALGSDTGGSV 143
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI-LRHVGHVLLQLPFAAQ 227
R+P+A CG++G +P G VS G+ P+S +LDTVG AR ++ R + + AA
Sbjct: 144 RIPAAVCGVVGLKPGRGLVSLRGVHPLSPALDTVGTLARSVEMAARALAAISGPDGAAAV 203
Query: 228 RSP--RQIIIADDC--FELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP-- 281
R P + ++ D + IP D + + V +L+ + + + G + P
Sbjct: 204 REPFDSEAALSMDVRGRRVAAIPLDDLGE-VHPDVGRLYLEAIERLRSAGVAVEMVRPPS 262
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
+L+ NG L+ E E I+ +DP I ++++ +E+
Sbjct: 263 ALEQSFAPNG-------LLMAGEGWRIWGERIQRHAEVMDPWIVRRFEAGRDVTDQRLED 315
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGG-KEMLSE-DYQNRAFSLLSIASVS 399
R E ++A + + L++PT P P + E +S RA + L + +S
Sbjct: 316 VHRRRAEDQAAFHAWIAGWDGLLSPTCPIPAPPIDEVDETVSPLSRLTRAANYLDLPGIS 375
Query: 400 GCCQVT 405
C +T
Sbjct: 376 VPCGLT 381
>gi|421785303|ref|ZP_16221734.1| glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Serratia
plymuthica A30]
gi|407752567|gb|EKF62719.1| glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Serratia
plymuthica A30]
Length = 449
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 97/153 (63%), Gaps = 3/153 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DLFD+ G T G AA++ + VV L++ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGS-RVLAAAPAAAKHAAVVERLLQAGAVVIGKTNMTEFA 128
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAVAVA + S+G DT G VR+P+AFC
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
G+ GF+P+ ++ G++P+S SLD++G A D
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHD 221
>gi|390576928|ref|ZP_10256973.1| amidase [Burkholderia terrae BS001]
gi|389931166|gb|EIM93249.1| amidase [Burkholderia terrae BS001]
Length = 451
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ +V DLFDI+G VT G R + A R + V+ L E GA +G+T +
Sbjct: 65 PSALAGVPVSVKDLFDIKGQVTTAGS-RILRDATPAVRDAAAVARLREAGAVFVGRTNMS 123
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY T NPA P ++ GGSSSGAAV+VA V +LG DT G VR+P+AF
Sbjct: 124 EFAFSGLGLNPHYGTLLNPAHPKRLAGGSSSGAAVSVALGHVAAALGTDTGGSVRIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG++GF+P+ V GI+P+S S D++G AR
Sbjct: 184 CGLVGFKPTARRVPLDGIVPLSASFDSIGPIAR 216
>gi|374333361|ref|YP_005083545.1| amidase signature enzyme [Pseudovibrio sp. FO-BEG1]
gi|359346149|gb|AEV39523.1| Amidase signature enzyme [Pseudovibrio sp. FO-BEG1]
Length = 417
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 169/381 (44%), Gaps = 23/381 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G++ ++ DLFD G VT G + R + A + VVS L GA G+T + E
Sbjct: 39 PLHGVAVSLKDLFDEFGIVTSAGS-SFLRNRAPACEDAKVVSALKAAGAFTCGRTNMSEL 97
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N H+ +P N ++PGGSSSGA +V L D +L DT G VR+P+A
Sbjct: 98 AFTGLGLNPHFGSPENILDALRIPGGSSSGAMASVGLGLCDAALATDTGGSVRIPAALNS 157
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+P+ A+S G+ I S DTVG+ AR + + VL PR+I
Sbjct: 158 LYGFKPTRAAISTKGVFSICPSFDTVGFIARSLHMCTRLHAVLSGQCLV----PRKISSL 213
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D + + A + + + F R +L + G + V H T
Sbjct: 214 DGLH--VGLVASPLAEGLDTQVSADFDRAMLAIRDAGAII-APVSEPALCHST-----TC 265
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
+ I YE + ++E +K DP + I + E++ +E +S R E A +
Sbjct: 266 LGTICSYEATALVSGYLEGLKQTADPYLLERILQSAEVTSKEMEEARSKRVEAIRAFKEM 325
Query: 357 LKDDGILVTPTTAYPPPKLGG-----KEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
IL+ PT P L +++ S+ QN ++ V G C T+P+ Y
Sbjct: 326 AGKFDILIAPTVPIIAPMLSDIDSNLEKIGSQLSQNTR----AVNWVDG-CAATIPMNTY 380
Query: 412 DKCPTSVSFIARHGGDRFLLD 432
T + R G D +L+
Sbjct: 381 GTPGTGLMLFGRAGSDWHVLE 401
>gi|91976358|ref|YP_569017.1| amidase [Rhodopseudomonas palustris BisB5]
gi|91682814|gb|ABE39116.1| Amidase [Rhodopseudomonas palustris BisB5]
Length = 463
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 179/400 (44%), Gaps = 39/400 (9%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFDI+G VT G + A + V+ L G IG+T +
Sbjct: 81 APSPFAGIPISIKDLFDIKGQVTRAGS-RALDDNPPAEADAPAVARLRRAGFVVIGRTNM 139
Query: 114 DEFAYSINGTNKHYDTPT---NPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
EFAYS G N HY TP N A +PGGSSSGAAV+VA + LG DT G R+
Sbjct: 140 TEFAYSGIGINPHYGTPKAAFNRDA-GHVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRI 198
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA--AQR 228
P+AF GI+G++PS V G +P+S SLD++G AR + VL P A R
Sbjct: 199 PAAFNGIVGYKPSQHRVPRDGAVPLSFSLDSIGPLARSVDCCAVLDAVLADAPIVPLAPR 258
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGR-QVLKHENLGEYFDSKVPSLKGFH 287
S + + +A L D V ++ + L G +++ L E+ D KG
Sbjct: 259 SLKGLRLAVPTTVALDELDDAVSVAFERALKTLSGHGAIIEKIELPEFLDVAPMMAKGGF 318
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSI 345
+ Y + H I + DP + I GE ++ V + +
Sbjct: 319 AAA----------ESYAW---HRYLIVAQGDVYDPRVRERILRGETQSAADYV--DLITA 363
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC---- 401
R + + + L LV PTTA PPK+ L++D +AF+ ++ ++ C
Sbjct: 364 RKSLIARACARLAPYDALVMPTTANTPPKIAD---LADD---KAFTKANLLALRNCTLIN 417
Query: 402 ----CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
C +++P + P + +G DR + + ++
Sbjct: 418 MIDGCAISLPCHRDGEAPVGLMLAGVNGADREIFEIAASL 457
>gi|270264918|ref|ZP_06193182.1| amidase [Serratia odorifera 4Rx13]
gi|270041216|gb|EFA14316.1| amidase [Serratia odorifera 4Rx13]
Length = 449
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 97/153 (63%), Gaps = 3/153 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DLFD+ G T G AA++ + VV L++ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGS-RVLAAAPAAAKHAAVVERLLQAGAVLIGKTNMTEFA 128
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAVAVA + S+G DT G VR+P+AFC
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
G+ GF+P+ ++ G++P+S SLD++G A D
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHD 221
>gi|337280584|ref|YP_004620056.1| amidase [Ramlibacter tataouinensis TTB310]
gi|334731661|gb|AEG94037.1| amidase-like protein [Ramlibacter tataouinensis TTB310]
Length = 466
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 178/391 (45%), Gaps = 50/391 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ DL ++EG + G W A+RT+T+ L+ G +GKT EF
Sbjct: 76 PLHGIPIALKDLVELEGKMVTGGSEVWKTRR--ATRTATLAQKLIAQGMIVLGKTHTVEF 133
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A GTN TP NP A ++ PGGSSSG+AVAVAA L +++G DT G VR+P+++
Sbjct: 134 AMGGWGTNSLRGTPWNPWDMARARTPGGSSSGSAVAVAAGLAPWAVGTDTGGSVRMPASW 193
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKILRHVGH-------VLLQLPF 224
CGI G + + G VS G++P+S +LDT G AR D +L + L LPF
Sbjct: 194 CGITGLKTTIGRVSTHGVLPLSPTLDTPGPMARSVEDAALLYMAMQGPDRQDPLTLGLPF 253
Query: 225 -----AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKL--FGRQVLKHENLGEYFD 277
+R R + +A ++P V+ S + L + R + E LG
Sbjct: 254 TDPMPTLKRGVRGMRLA-------RMPE---VERQFASADVLAAYDRSLQDLERLGAEI- 302
Query: 278 SKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET 337
VP F + N +R++ + H E I+ LDP + I IS
Sbjct: 303 --VPVDLPFLFADVAAFN-LRIMAAESYALYH-ELIDDESAPLDPHVRPRIAAGRNISAQ 358
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTP---TTAYPPPKLGGKEMLSEDYQNRAFSLLS 394
+R EM+ S L+ L+TP TTA P L E Q +A + +
Sbjct: 359 SYIEALQVRQEMKRKFESALEGIDALLTPTTMTTALP---------LEEVDQTKAPAHFT 409
Query: 395 -IASVSGCCQVTVPLGYY-DKCPTSVSFIAR 423
+ C + +P G D PTS+ + R
Sbjct: 410 RFGNFLDLCGLALPNGSAPDGLPTSLQVVCR 440
>gi|73541082|ref|YP_295602.1| amidase [Ralstonia eutropha JMP134]
gi|72118495|gb|AAZ60758.1| Amidase [Ralstonia eutropha JMP134]
Length = 451
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 8/157 (5%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVV 113
HPL GL +V DLFD+ G VT A H A A+ +TVV+ L GA +G+T +
Sbjct: 65 HPLAGLPVSVKDLFDVAGEVT---RAASAVRHDAPPATADATVVARLRHAGAALVGRTNM 121
Query: 114 DEFAYSINGTNKHYDTPTNPAAP---SQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
EFA+S G N H+ TP NPA+ +++PGGSSSGAAV+VA L +LG DT G +R+
Sbjct: 122 TEFAFSGVGINPHFGTPVNPASADGIARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRI 181
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
P+A CG+ GF+P+ V G P+S +LDT AR
Sbjct: 182 PAALCGLTGFKPTTRRVPLTGAFPLSYTLDTACAMAR 218
>gi|148254382|ref|YP_001238967.1| amidase [Bradyrhizobium sp. BTAi1]
gi|146406555|gb|ABQ35061.1| Putative Glu-tRNA amidotransferase [Bradyrhizobium sp. BTAi1]
Length = 450
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 179/394 (45%), Gaps = 37/394 (9%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFDI+G VT G + A + VV+ L G IG+T +
Sbjct: 68 APSPYAGIPVSIKDLFDIKGQVTRAGS-RALEDSAPADADAPVVARLRRAGFVVIGRTNM 126
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP + +PGGSSSGAAV+V + +LG DT G R+P
Sbjct: 127 TEFAYSGIGINPHYGTPKSAWKREIGHVPGGSSSGAAVSVVDRMAYGALGTDTGGSCRIP 186
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA--AQRS 229
+AF GI GF+P+ V G +P+ST+LD+ G A + VL P A R
Sbjct: 187 AAFNGITGFKPTQARVPLDGGVPLSTTLDSFGPLANTVACCAVLDSVLADEPIRPLAPRP 246
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVL-KHENLGEYFDSKVPSLKGFHK 288
+ + +A +L V + ++ E L + L + E+ D + +KG
Sbjct: 247 VKGLRLAVPTTVVLDELDVEVAETFERALETLAKQGALIERIEFPEFLDVGLIGMKGGFA 306
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIR 346
+ Y + H + + DP +S I GE + + + IE + R
Sbjct: 307 AA----------ESYAW---HRFLLTAKGDVYDPRVSVRIMRGEAITVPD-YIEMLNARR 352
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC----- 401
+ + A + + D LV PTTA PPK+ L++D +AF+ +I ++ C
Sbjct: 353 SLVARAAARIAPYDA-LVMPTTANAPPKIAD---LADD---QAFARENIRALRNCTFINM 405
Query: 402 ---CQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
C +++P + P + G DR LL+
Sbjct: 406 IDGCAISLPAHRHGDVPVGLMLAQSGGNDRKLLE 439
>gi|410419939|ref|YP_006900388.1| amidase [Bordetella bronchiseptica MO149]
gi|427821660|ref|ZP_18988722.1| putative amidase [Bordetella bronchiseptica Bbr77]
gi|408447234|emb|CCJ58906.1| putative amidase [Bordetella bronchiseptica MO149]
gi|410586925|emb|CCN01954.1| putative amidase [Bordetella bronchiseptica Bbr77]
Length = 449
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 166/386 (43%), Gaps = 29/386 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD+ G T G + AA R + VV L GA +G+T + EFA
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVAR-QGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFA 127
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A C
Sbjct: 128 YSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAALC 187
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL-----LQLPF-AAQRS 229
G+ GF+PS VS G++P+S +LD++G A + + +L +P AA R
Sbjct: 188 GLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDADMPVPAALRG 247
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R L +P + + F + K G D VP
Sbjct: 248 LR-----------LAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIAVPEFAQLAD 296
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + + + H + IE DP + A I ++S + + R
Sbjct: 297 INS--KGGFTAAEAWAW---HRDLIERAADRYDPRVVARIRRGADMSAADYIDLLAARQA 351
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVT 405
R+ + + + LV PT P + E + + +L ++ + ++
Sbjct: 352 WRAGVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLINFLDGSALS 411
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P P + A +G DR +L
Sbjct: 412 LPCHEAGTAPVGLMVAAANGSDRRVL 437
>gi|220908629|ref|YP_002483940.1| allophanate hydrolase [Cyanothece sp. PCC 7425]
gi|219865240|gb|ACL45579.1| allophanate hydrolase [Cyanothece sp. PCC 7425]
Length = 607
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 190/408 (46%), Gaps = 23/408 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FA+ D D G T G PE+A R++ VV L+ GA IGKT +D+F
Sbjct: 67 PLYGIPFAIKDNLDWAGTPTTAGCPEFAYI---PKRSAPVVEKLIAAGAIPIGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + GT Y NP + +PGGSS+G+AVAV+A LV F LG DT G RVP+AF
Sbjct: 124 ATGLVGTRTPYGICRNPFHQNYIPGGSSAGSAVAVSAGLVSFGLGTDTAGSGRVPAAFTN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK----ILRHVGHVLLQLPFAAQRSPRQ 232
I+G +PS G +S G++P SLD V F+ + +L VG PFA + P +
Sbjct: 184 IVGLKPSRGYLSTTGLVPAVRSLDCVSIFSLTCEEARYLLELVGEFDPADPFARRPEPIE 243
Query: 233 IIIADDCFELLKIPADRVVQVV-IKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ ++ + +PA ++ +STE ++ + + E+LG + F +T
Sbjct: 244 VPRLNEL--RIGVPAAAELEFWGDRSTEAVYREALARLESLG--CQIREIDFAPFRETGL 299
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESV-KPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
L L +RY E+I++ + LDP ++ I + E E+R
Sbjct: 300 LLYEGAWLAERYA---AVGEFIQAYPQTTLDPVVAGIIQKGGEYDAVAAFRGMYRLAELR 356
Query: 351 SAISSLLKDDGILVTPTTA--YPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+ +L PTT Y + + + R + +++ +S + VP
Sbjct: 357 RQTEPQWQQMDLLAVPTTGTIYSRMAVKSDPIKLNSHLGRYTNFVNLLDLSA---LAVPA 413
Query: 409 GYY-DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLST 455
G+ + P ++ IA G+ LL +V + + ATK +LS+
Sbjct: 414 GFQTNGLPAGMTLIAPAWGEPLLL-SVGTAFETQLAGTLGATKVQLSS 460
>gi|153010121|ref|YP_001371335.1| amidase [Ochrobactrum anthropi ATCC 49188]
gi|151562009|gb|ABS15506.1| Amidase [Ochrobactrum anthropi ATCC 49188]
Length = 443
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 165/380 (43%), Gaps = 22/380 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+ V FD EG+VT G + + + AS ++ +V L GGAT + +T + EF
Sbjct: 68 PLAGLTMTVKACFDTEGWVTSCGS-KALQEAAPASASAALVRRLRMGGATLLAQTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY G N H+ TP P P+ + GGSSSGAAVAVA DF++ DT G R+P+AF
Sbjct: 127 AYGALGVNTHFGTPRTPLDPAGEAIAGGSSSGAAVAVARGYSDFAICSDTSGSARIPAAF 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG++GF+PS G G+ +STS D G + R + V +P R +QI
Sbjct: 187 CGVVGFKPSRGRYETDGMHWLSTSFDVPGIISTSVAHCRLIDDVATGIPARKPRRSKQIR 246
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+A +P + + E LFG E G D ++PSL +
Sbjct: 247 LA--------VPRLLSETALDNTVEDLFGACRSALEAAGIVVQDIELPSL--IESARIAV 296
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
M + Y H E + + DP + I + E + N + R
Sbjct: 297 DGGMIGAEAYAL---HRERLAVDFDSYDPLVGTRIQKGRENPAYLYVNALNALAACREQF 353
Query: 354 SSLLKDDGILVTPTTAYPPPKLG--GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ ++ + PT PP L E RAFSL A+ +++P+G
Sbjct: 354 DAEIEGFDGFILPTVPMLPPALATLADEETYLALNRRAFSLTEFANRLDLPSISLPIG-- 411
Query: 412 DKCPTSVSFIARHGGDRFLL 431
K P + G D LL
Sbjct: 412 -KHPAGLMLTGLRGEDETLL 430
>gi|420246927|ref|ZP_14750352.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398072929|gb|EJL64121.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 451
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ +V DLFDI+G VT G R + A R + V+ L E GA +G+T +
Sbjct: 65 PSALAGVPVSVKDLFDIKGQVTTAGS-RILRDATPAVRDAAAVARLREAGAVFVGRTNMS 123
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP NPA ++ GGSSSGAAV+VA V +LG DT G VR+P+AF
Sbjct: 124 EFAFSGLGLNPHYGTPVNPAHAKRLAGGSSSGAAVSVALGHVAAALGTDTGGSVRIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG++GF+P+ V G +P+S S D++G AR
Sbjct: 184 CGLIGFKPTARRVPLDGTVPLSASFDSIGPIAR 216
>gi|404319588|ref|ZP_10967521.1| amidase [Ochrobactrum anthropi CTS-325]
Length = 443
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 165/380 (43%), Gaps = 22/380 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+ V FD EG+VT G + + + AS ++ +V L GGAT + +T + EF
Sbjct: 68 PLAGLTMTVKACFDTEGWVTSCGS-KALQEAAPASASAALVRRLRMGGATLLAQTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY G N H+ TP P P+ + GGSSSGAAVAVA DF++ DT G R+P+AF
Sbjct: 127 AYGALGVNTHFGTPRTPLDPAGEAIAGGSSSGAAVAVARGYSDFAICSDTSGSARIPAAF 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG++GF+PS G G+ +STS D G + R + V +P R +QI
Sbjct: 187 CGVVGFKPSRGRYETDGMHWLSTSFDVPGIISTSVAHCRLIDDVATGIPARKPRRSKQIR 246
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+A +P + + E LFG E G D ++PSL +
Sbjct: 247 LA--------VPRLLSETALDNTVEDLFGACRSALEATGIVVQDIELPSL--IESARIAV 296
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
M + Y H E + + DP + I + E + N + R
Sbjct: 297 DGGMIGAEAYAL---HRERLAVDFDSYDPLVGTRIQKGRENPAYLYVNALNALAACREQF 353
Query: 354 SSLLKDDGILVTPTTAYPPPKLG--GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ ++ + PT PP L E RAFSL A+ +++P+G
Sbjct: 354 DAEIEGFDGFILPTVPMLPPALATLADEETYLALNRRAFSLTEFANRLDLPSISLPIG-- 411
Query: 412 DKCPTSVSFIARHGGDRFLL 431
K P + G D LL
Sbjct: 412 -KHPAGLMLTGLRGEDETLL 430
>gi|293602932|ref|ZP_06685371.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter
piechaudii ATCC 43553]
gi|292818726|gb|EFF77768.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter
piechaudii ATCC 43553]
Length = 460
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ DL DI G T G P A T A+RT+ +V L GA +GKT + +F
Sbjct: 71 PLHGVPIALKDLIDITGRPTTIGSPIHANT--VAARTAELVQQLQRAGAIILGKTHMVQF 128
Query: 117 AYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A G N+H TP NP ++PGGSSSG+AVAVA L ++G DT G VRVP+++
Sbjct: 129 AMGAWGFNQHMGTPRNPWDDHVHRIPGGSSSGSAVAVAGRLAPAAIGTDTGGSVRVPASY 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
CGI G +P+ G +S G++ +S +LD+VG FA R V VL
Sbjct: 189 CGITGLKPTVGRISSRGVVTLSQTLDSVGIFAHSAADARLVFDVL 233
>gi|120404134|ref|YP_953963.1| amidase [Mycobacterium vanbaalenii PYR-1]
gi|119956952|gb|ABM13957.1| Amidase [Mycobacterium vanbaalenii PYR-1]
Length = 364
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 164/377 (43%), Gaps = 26/377 (6%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
+ AV DLFD+ G VT G+P A +AA + V + L G AT + KT DE A +
Sbjct: 1 MRVAVKDLFDVAGTVTAAGNPTLAAGPAAAHHAAAVAALLSAG-ATVVAKTATDELAMGM 59
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N HY TP NPAAP ++PGGSSSG+A VA + LG DT G +RVP+AFCG+ G
Sbjct: 60 FGVNAHYGTPPNPAAPDRVPGGSSSGSASLVAGGQAELGLGTDTGGSIRVPAAFCGLAGL 119
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
R ++G + G+ ++ DTVG A + L VL R+PR++
Sbjct: 120 RTTHGRIDTAGVRAMAPEFDTVGLMAVETSFLAKAFSVLTT-----PRTPREVTA----- 169
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLI 300
L + D + E LG + SL G + V +
Sbjct: 170 --LVLLTDLAALASADVAARTRATAARWAERLG--LPLRTASLGG----GPDPVRVFWPL 221
Query: 301 QRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDD 360
+ + + W+ +P L I+ I +++ +E ++ R R + LL
Sbjct: 222 MSAQLWDTNGAWVAEARPVLGTGIAERIRAAASVTDAEVEVAEAQRTRFREHLHGLLA-G 280
Query: 361 GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY------DKC 414
+ V PTT P Y++R + + AS++G Q+T+P G
Sbjct: 281 AVAVLPTTMDAAPARTADHAALMAYRDRNLAFVVPASLAGAPQLTMPQGTVTDAGCGTDA 340
Query: 415 PTSVSFIARHGGDRFLL 431
P S + G D LL
Sbjct: 341 PVGASLLGLPGDDELLL 357
>gi|311743177|ref|ZP_07716985.1| probable glutamyl-tRNA(Gln) amidotransferase, subunit A
[Aeromicrobium marinum DSM 15272]
gi|311313857|gb|EFQ83766.1| probable glutamyl-tRNA(Gln) amidotransferase, subunit A
[Aeromicrobium marinum DSM 15272]
Length = 405
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 164/377 (43%), Gaps = 29/377 (7%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+PP A PL G++ AVSD+ + G G GHP T + + + VV++L+ GA+ G
Sbjct: 44 VPPTARGPLDGMALAVSDMVAVAGQRRGLGHPVRVATSAPETDHAPVVASLLAAGASVRG 103
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
+DE ++ GTN H TNP AP ++ GG++ GAA AVA LG DTVG +R
Sbjct: 104 IAQIDELGNALTGTNPHVGATTNPRAPDRLAGGANCGAAAAVALGHAQVGLGTDTVGCLR 163
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
VP+A+ G+ RP+ G V G +S S DTVGW + L VG LL A
Sbjct: 164 VPAAYQGLWSMRPTQGVVDASGATNLSPSFDTVGWVTAGVESLARVGATLLPADVATVSG 223
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG-EYFDSKVPSLKGFHK 288
++ D +L D+V R+VL +G E++DS G
Sbjct: 224 ----LVVDPA--ILAAADDQV-------------REVLDPAMVGLEHWDS------GLLA 258
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
T+ L + + + E H W+E A+ D+ A + E
Sbjct: 259 TDAAL-HAFQTVVAAEAWQVHGRWVEEHADAIGADVGARFRHAASVDPVWTRRSTEQVAE 317
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
R I + L + +LV PT P + + L + L +A + G V+VPL
Sbjct: 318 WRHLIRTALAEQ-VLVVPTAPTVAPLVRDADHLPA-LRRATIRLTCLAGLGGLPTVSVPL 375
Query: 409 GYYDKCPTSVSFIARHG 425
P +S + G
Sbjct: 376 STTAGVPVGLSLVGPAG 392
>gi|260905667|ref|ZP_05913989.1| Amidase [Brevibacterium linens BL2]
Length = 434
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 148/314 (47%), Gaps = 20/314 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV D+ D+ G+ T G + +AS + VVS L GA + KT E++
Sbjct: 49 LEGIPFAVKDVIDVAGFPTTMGSNVSSGPDPSAS--APVVSLLERAGALPVVKTNCQEYS 106
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y I G + NP P+ GGSSSG+A VAA +V +LG DT G VRVP+A G+
Sbjct: 107 YGILGDESAFGRVINPVDPALCTGGSSSGSAALVAAGVVPLALGTDTAGSVRVPAACQGV 166
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL---QLPFAAQRSPRQII 234
+GF+P++G VS G+ P+S S DTVG FARD +L V+ A SP +
Sbjct: 167 IGFKPTFGTVSAEGVFPLSPSFDTVGLFARDLPLLTAAFRVISGNGADASPAVSSPAETP 226
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKL--FGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
D LL + V ++E L G+ N+ +Y + F+
Sbjct: 227 RID--LSLLNAADESAAGVRAWASEHLSGSGKATTTSANV-DYLTELIERGIDFYD---- 279
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
+++RYE H ++++ P + A+I I+E ++ + E+R+
Sbjct: 280 ------IVRRYEAYVLHKQFLDDQGEQYQPGVWAKILSGQNITEAEYQSNVASLEELRAT 333
Query: 353 ISSLLKDDGILVTP 366
S D ++TP
Sbjct: 334 AESFFDDVDFIITP 347
>gi|33592922|ref|NP_880566.1| amidase [Bordetella pertussis Tohama I]
gi|384204220|ref|YP_005589959.1| amidase [Bordetella pertussis CS]
gi|408415768|ref|YP_006626475.1| amidase [Bordetella pertussis 18323]
gi|33572570|emb|CAE42157.1| putative amidase [Bordetella pertussis Tohama I]
gi|332382334|gb|AEE67181.1| amidase [Bordetella pertussis CS]
gi|401777938|emb|CCJ63296.1| putative amidase [Bordetella pertussis 18323]
Length = 449
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 166/386 (43%), Gaps = 29/386 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD+ G T G + AA R + VV L GA +G+T + EFA
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVAR-QGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFA 127
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A C
Sbjct: 128 YSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAALC 187
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL-----LQLPF-AAQRS 229
G+ GF+PS VS G++P+S +LD++G A + + +L +P AA R
Sbjct: 188 GLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDADMPAPAALRG 247
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R L +P + + F + K G D VP
Sbjct: 248 LR-----------LAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIAVPEFAQLAD 296
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + + + H + IE DP + A I ++S + + R
Sbjct: 297 INS--KGGFTAAEAWAW---HRDLIERAADRYDPRVVARIRRGADMSAADYIDLLAARQA 351
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVT 405
R+ + + + LV PT P + E + + +L ++ + ++
Sbjct: 352 WRAGVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLINFLDGSALS 411
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P P + A +G DR +L
Sbjct: 412 LPCHEAGTAPVGLMVAAANGSDRRVL 437
>gi|381205032|ref|ZP_09912103.1| allophanate hydrolase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 602
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 178/399 (44%), Gaps = 30/399 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F + D D+ G T P +A T + S VV+ ++ GA IGKT +D+F
Sbjct: 67 PLWGIPFVIKDNIDVSGIPTTAACPAFAYT---PKKDSFVVNKILTAGALLIGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + GT Y P N +PGGSSSG+AVAVA L F+LG DT G RVP+A
Sbjct: 124 ATGLVGTRTPYTPPKNTFNKEIIPGGSSSGSAVAVAQGLASFALGTDTAGSGRVPAALNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL----PFAAQRSPRQ 232
I+G +P+ GA+S+ G++P +LDT+ FA + V V PF+ + + Q
Sbjct: 184 IVGLKPTLGALSNSGVVPACRTLDTISTFALTVQDAYEVYEVAASYDRSDPFSKKTTINQ 243
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTE-KLFGRQVLKHENLGEYFDSKVPSL--KGFHKT 289
+ F + +P Q + K+F ++ E LG K+ L + F +
Sbjct: 244 LNTKLPHFN-VGVPNQNTRQFFGDIRQAKMFDDSLISIEMLG----GKIYELDFEPFFQA 298
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
L + + +R+ + IE AL P I LE S + E+
Sbjct: 299 AEMLYDGPWIAERH---ITVEKIIEENPAALHPVTRKVIENALEFSAADTFQAQYRLQEL 355
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED---YQNRAFSLLSIASVSGCCQVTV 406
I +L D +L P+ PK E L D + + + ++ C +TV
Sbjct: 356 TIQIKEILNDIDMLCVPSV----PKYFTLEDLRADPIGLNTQLGTYTNFVNLLDLCAITV 411
Query: 407 PLGY-YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
P D P SV+ I + G D + + ++ ASLQ+
Sbjct: 412 PTAMRQDNLPGSVTLIGKAGED----ERIASVAASLQKH 446
>gi|395786650|ref|ZP_10466377.1| hypothetical protein ME5_01695 [Bartonella tamiae Th239]
gi|423716456|ref|ZP_17690646.1| hypothetical protein MEG_00186 [Bartonella tamiae Th307]
gi|395422948|gb|EJF89144.1| hypothetical protein ME5_01695 [Bartonella tamiae Th239]
gi|395429385|gb|EJF95453.1| hypothetical protein MEG_00186 [Bartonella tamiae Th307]
Length = 445
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P G+ A DLFD+ G +T G + A + S VV+ L + G CIGKT + EF
Sbjct: 62 PFDGVPIAYKDLFDVAGTLTTAGAATCLKAPKAQNDAS-VVAKLAQFGMVCIGKTNLTEF 120
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS G NK++ TP+N +PGGS SGAAV VA ++V S G DT G + +P+ F G
Sbjct: 121 AYSGLGLNKYFGTPSNACDEDYIPGGSLSGAAVCVAKNIVPLSFGTDTAGSICIPACFNG 180
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
++G+R S + G+ P+++SLDT+G A+ K
Sbjct: 181 VIGYRSSMKRYAQQGVYPLASSLDTIGPLAKSVK 214
>gi|333928941|ref|YP_004502520.1| amidase [Serratia sp. AS12]
gi|333933894|ref|YP_004507472.1| amidase [Serratia plymuthica AS9]
gi|386330764|ref|YP_006026934.1| amidase [Serratia sp. AS13]
gi|333475501|gb|AEF47211.1| Amidase [Serratia plymuthica AS9]
gi|333493001|gb|AEF52163.1| Amidase [Serratia sp. AS12]
gi|333963097|gb|AEG29870.1| Amidase [Serratia sp. AS13]
Length = 449
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DLFD+ G T G AA++ + VV L++ G IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGS-RLLAAAPAAAKHAAVVERLLQAGTVVIGKTNMTEFA 128
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAVAVA + S+G DT G VR+P+AFC
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
G+ GF+P+ ++ G++P+S SLD++G A D
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHD 221
>gi|222106852|ref|YP_002547643.1| hypothetical protein Avi_5886 [Agrobacterium vitis S4]
gi|221738031|gb|ACM38927.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4]
Length = 459
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A DLFD++G T G ASR + VV+ L G IG+ + EF
Sbjct: 76 PLDGIPIAWKDLFDLKGVTTTAGSVVL-DDQPPASRDADVVAALASAGMVSIGQVNMSEF 134
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+S G N HY TP NP +++PGGSSSG+AVAVAA LV S+G DT G VR+PSAF
Sbjct: 135 AFSGLGVNPHYGTPRNPHGVGEARVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAF 194
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G S G+ P+S SLD++G R
Sbjct: 195 NGIVGYKATRGRYSMRGVFPLSKSLDSLGPLCR 227
>gi|399019362|ref|ZP_10721510.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398097972|gb|EJL88265.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 450
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 97/160 (60%), Gaps = 7/160 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ GL ++ DLFD+ G T G R + AA+ ++ VV L+ GA +G+T + EF
Sbjct: 68 PIEGLPVSIKDLFDVAGETTLAGSVAL-RGYPAATESAVVVKRLIAAGAVIVGRTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNP----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
AYS G N HY TP NP ++PGGSSSGAA++V + +G DT G +R+P+
Sbjct: 127 AYSGLGINPHYGTPRNPWQREVDGGRIPGGSSSGAAISVTDGMAVAGVGSDTGGSIRIPA 186
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
AFCGI GF+P+ V G++P+S +LD++G A P +L
Sbjct: 187 AFCGITGFKPTARRVPMQGVLPLSENLDSIGAMA--PTVL 224
>gi|160901696|ref|YP_001567277.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Petrotoga mobilis
SJ95]
gi|160359340|gb|ABX30954.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Petrotoga mobilis
SJ95]
Length = 453
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 194/417 (46%), Gaps = 57/417 (13%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G+ F V D +EG T G +S T+T V L++ G T +GKT +DEFA
Sbjct: 45 GIPFLVKDNILVEGTKTTNGSKILENYNSPY--TATAVERLLKAGFTVVGKTNMDEFA-- 100
Query: 120 INGTNKH--YDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ TN+H + NP +++PGGSS G+A AVAA V FSLG DT G VR P+AFCG+
Sbjct: 101 MGNTNEHSAFGPVRNPKDLARVPGGSSGGSAAAVAAGYVPFSLGSDTGGSVRQPAAFCGV 160
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
+GF+PSYG +S G+ S+SLD +G FA + K R V ++ + P+ +
Sbjct: 161 VGFKPSYGMISRYGLTAFSSSLDQIGVFANNVKDARTVTEIM------KGKDPKDSTTLE 214
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV- 296
+L+K V++ + T K+ +V+ HEN + + F ++ G + +V
Sbjct: 215 HDKDLVK-----DVEIDLSKT-KICIPKVVYHENADDNVIKQFERAINFLRSKGAIVDVK 268
Query: 297 -----------MRLIQRYEFKNNHNEWIESVKPALDPDI---------SAEIGEMLEISE 336
+I E +N + + + VK L D + E+G +E+
Sbjct: 269 DIPELEYSVAIYYIIAPAEASSNLSRY-DGVKYGLRNDALGLNRMYKSTREVGFGMEVKR 327
Query: 337 TVI---------------ENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
++ +R + I +L D +++TPT+ PPK+G K
Sbjct: 328 RIMMGTFNLSSLYYDQYYSKASKVRKLLSDKIKEVLNDYNLIMTPTSPVLPPKIGEKLKP 387
Query: 382 SEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
+ Y F++ A+++G +++P G P + FI R+ D LL N +
Sbjct: 388 LDYYLMDIFTIP--ANLNGSPAISIPFGDVQGLPFGIQFIGRYMKDEELLTIADNFF 442
>gi|398376672|ref|ZP_10534854.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. AP16]
gi|397727866|gb|EJK88290.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. AP16]
Length = 455
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 93/152 (61%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLF I G T G AR + AS + +V L E G +G+ + EFA
Sbjct: 72 LDGIPIAWKDLFAIRGLPTTAGSTVLAR-EAPASEDADIVQALAEAGMVSVGRVNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSG+AVAVAA LV S+G DT G VR+PSAF
Sbjct: 131 FSGLGLNPHYGTPLNPLSKDVERVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G++ S G S G+ P++TSLD++G R
Sbjct: 191 GLVGYKASRGRYSMAGVFPLATSLDSLGPLCR 222
>gi|33597574|ref|NP_885217.1| amidase [Bordetella parapertussis 12822]
gi|33574002|emb|CAE38322.1| putative amidase [Bordetella parapertussis]
Length = 449
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 166/386 (43%), Gaps = 29/386 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD+ G T G + AA R + VV L GA +G+T + EFA
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVAR-QGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFA 127
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A C
Sbjct: 128 YSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAALC 187
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL-----LQLPF-AAQRS 229
G+ GF+PS VS G++P+S +LD++G A + + +L +P AA R
Sbjct: 188 GLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDADIPAPAALRG 247
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R L +P + + F + K G D VP
Sbjct: 248 LR-----------LAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIAVPEFAQLAD 296
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + + + H + IE DP + A I ++S + + R
Sbjct: 297 INS--KGGFTAAEAWAW---HRDLIERAADRYDPRVVARIRRGADMSAADYIDLLAARQA 351
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVT 405
R+ + + + LV PT P + E + + +L ++ + ++
Sbjct: 352 WRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLINFLDGSALS 411
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P P + A +G DR +L
Sbjct: 412 LPCHEAGTAPVGLMVAAANGSDRHVL 437
>gi|265983701|ref|ZP_06096436.1| amidase [Brucella sp. 83/13]
gi|306838702|ref|ZP_07471537.1| amidase [Brucella sp. NF 2653]
gi|264662293|gb|EEZ32554.1| amidase [Brucella sp. 83/13]
gi|306406189|gb|EFM62433.1| amidase [Brucella sp. NF 2653]
Length = 445
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 175/395 (44%), Gaps = 47/395 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DLFD+ G T G R A + +V L GA IGKT + EF
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGS-VVRRDAPPAGCDAVIVQRLRNAGAVIIGKTHMTEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P+A G
Sbjct: 111 AFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNG 170
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ + G P++ SLD+VG + R V +L A + I+
Sbjct: 171 LVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILT--DAVMAGEKTILPE 222
Query: 237 DDCFELLKI--PADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ L+I P D ++ + F + E G D V L G L
Sbjct: 223 ALPVKGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 276
Query: 294 KNVMRL--IQRYEFKNNH-NEWIESVKPALDPD----------ISAEIGEMLEISETVIE 340
K R+ I E N H + W+ DPD +S I LE ++E
Sbjct: 277 KEATRIGSIAGIEASNIHASTWLA------DPDANVDIRVKRPLSVRIKVPLEAYHALME 330
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIA 396
K++ EM +S + TP T P + E+Y +R SLL +A
Sbjct: 331 TRKALAREMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVESLLLRDTQVA 385
Query: 397 SVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ C +T+P+ K P + AR+G D+ LL
Sbjct: 386 NQFDLCSITLPMPGT-KLPAGLMLTARNGSDKRLL 419
>gi|427814399|ref|ZP_18981463.1| putative amidase [Bordetella bronchiseptica 1289]
gi|410565399|emb|CCN22955.1| putative amidase [Bordetella bronchiseptica 1289]
Length = 449
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 166/386 (43%), Gaps = 29/386 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD+ G T G + AA R + VV L GA +G+T + EFA
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVAR-QDEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFA 127
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A C
Sbjct: 128 YSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAALC 187
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL-----LQLPF-AAQRS 229
G+ GF+PS VS G++P+S +LD++G A + + +L +P AA R
Sbjct: 188 GLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDADIPAPAALRG 247
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R L +P + + F + K G D VP
Sbjct: 248 LR-----------LAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIAVPEFAQLAD 296
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + + + H + IE DP + A I ++S + + R
Sbjct: 297 INS--KGGFTAAEAWAW---HRDLIERAADRYDPRVVARIRRGADMSAADYIDLLAARQA 351
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVT 405
R+ + + + LV PT P + E + + +L ++ + ++
Sbjct: 352 WRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLINFLDGSALS 411
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P P + A +G DR +L
Sbjct: 412 LPCHEAGTAPVGLMVAAANGSDRRVL 437
>gi|386396705|ref|ZP_10081483.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
gi|385737331|gb|EIG57527.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
Length = 449
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 184/414 (44%), Gaps = 57/414 (13%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP G+ ++ DLFDI+G VT G S A + + V+ L + G IG+T +
Sbjct: 67 APSRYAGIPVSIKDLFDIKGQVTRAGS-RALDDSSPAEQDAPTVARLRKAGFVVIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP A +PGGSSSGAAV+V + +LG DT G R+P
Sbjct: 126 TEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A+ GI+G++P+ V G +P+S SLD++G AR + VL P A + PR
Sbjct: 186 AAYNGIVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLANEPIAPLK-PR 244
Query: 232 QI----------IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP 281
+ I DD + +R ++ + +++ + E+ D
Sbjct: 245 PVKGMRLAVPTTIALDDLDAAVAGTFERALKTLADHG------AIIERIEMAEFHDIGPM 298
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVI 339
+ KG + + Y + H + S DP +S I GE ++ +
Sbjct: 299 NAKGGFAAS----------ESYAW---HRYLLTSKGDVYDPRVSVRIMRGEAQSAADYI- 344
Query: 340 ENCKSIRNEMRSAISSL---LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIA 396
+ NE RS I+ + + LV PTTA PPK+ L++D +AF+ ++
Sbjct: 345 ----DLLNERRSLIARVNARIAPYDALVLPTTANTPPKIAD---LADD---KAFTRENLR 394
Query: 397 SVSGC--------CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
++ C C +++P + P + G DR + + M A ++
Sbjct: 395 ALRNCTLINMIDGCAISLPAHREGEIPVGLMLAGAGGSDRRIFELAAGMEAVIR 448
>gi|418532785|ref|ZP_13098682.1| amidase [Comamonas testosteroni ATCC 11996]
gi|371450111|gb|EHN63166.1| amidase [Comamonas testosteroni ATCC 11996]
Length = 454
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 18/386 (4%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL GL +V DLFDI G+ T G + A++T+ VV L GA +G T +
Sbjct: 66 ARSPLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNM 124
Query: 114 DEFAYSINGTNKHYDTPTNPAA----PSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
EFAYS G N HY TP NP ++PGGSSSGAA++V + ++G DT G VR
Sbjct: 125 TEFAYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVR 184
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+PSA CG+ GF+P+ VS G++P+S +LD++G A + + VL + +S
Sbjct: 185 IPSALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLAPSVRCCAALDAVL------SGQS 238
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-LKHENLGEYFDSKVPSLKGFHK 288
++ A L P + V+ + + + R + L + + ++ V +
Sbjct: 239 HGELRAASLQGLRLLAPTNVVLDGMDSAVAAAWQRALSLLYAAGVQITEAVVQPFSELAQ 298
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + + + +H + + DP + I +IS ++R +
Sbjct: 299 INS--KGGFTAAEAWAWHRSHIDGAGRLAE-YDPRVGTRILRGKDISAADYIELLALRQQ 355
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVT 405
+ + + + D +++ PT PK+ + E Y +L ++ + C V+
Sbjct: 356 WIARVQAQMADHDLMLMPTVPVIAPKIAELQASDEAYFAANGLMLRNPTLINFLDGCAVS 415
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P + P +S G D+ LL
Sbjct: 416 LPCHRAGEAPVGLSLAGTAGQDQRLL 441
>gi|412338126|ref|YP_006966881.1| amidase [Bordetella bronchiseptica 253]
gi|408767960|emb|CCJ52718.1| putative amidase [Bordetella bronchiseptica 253]
Length = 449
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 166/386 (43%), Gaps = 29/386 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD+ G T G + AA R + VV L GA +G+T + EFA
Sbjct: 69 IDGLPLSIKDLFDVAGETTMAGSVAR-QDEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFA 127
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A C
Sbjct: 128 YSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAALC 187
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL-----LQLPF-AAQRS 229
G+ GF+PS VS G++P+S +LD++G A + + +L +P AA R
Sbjct: 188 GLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDADIPAPAALRG 247
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R L +P + + F + K G D VP
Sbjct: 248 LR-----------LAVPTTLALDGLDAHVSATFSATLAKLAEAGACIDEIAVPEFAQLAD 296
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + + + H + IE DP + A I ++S + + R
Sbjct: 297 INS--KGGFTAAEAWAW---HRDLIERAADRYDPRVVARIRRGADMSAADYIDLLAARQA 351
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVT 405
R+ + + + LV PT P + E + + +L ++ + ++
Sbjct: 352 WRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLINFLDGSALS 411
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P P + A +G DR +L
Sbjct: 412 LPCHEAGTAPVGLMVAAANGSDRRVL 437
>gi|163856545|ref|YP_001630843.1| amidase [Bordetella petrii DSM 12804]
gi|163260273|emb|CAP42575.1| putative amidase [Bordetella petrii]
Length = 451
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 94/152 (61%), Gaps = 3/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ GL ++ DLFD+ G T G + AA + VV L+ GA IG+T + EF
Sbjct: 68 PIDGLPVSIKDLFDVAGETTLAGSVA-RQGEPAADEHAVVVQRLLAAGAVIIGRTNMVEF 126
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A
Sbjct: 127 AYSGLGINPHYGTPLNPWDRATGRIPGGSSSGAAVSVTDGMALGAIGSDTGGSVRIPAAL 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
CG+ GF+PS VS G++P+STSLD++G A
Sbjct: 187 CGLAGFKPSAWRVSMAGVLPLSTSLDSIGPLA 218
>gi|299533924|ref|ZP_07047287.1| amidase [Comamonas testosteroni S44]
gi|298718094|gb|EFI59088.1| amidase [Comamonas testosteroni S44]
Length = 225
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL GL +V DLFDI G+ T G + A++T+ VV L GA +G T +
Sbjct: 66 ARSPLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNM 124
Query: 114 DEFAYSINGTNKHYDTPTNP----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
EFAYS G N HY TP NP ++PGGSSSGAA++V + ++G DT G VR
Sbjct: 125 TEFAYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVR 184
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+PSA CG+ GF+P+ VS G++P+S +LD++G A
Sbjct: 185 IPSALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLA 221
>gi|261419598|ref|YP_003253280.1| amidase [Geobacillus sp. Y412MC61]
gi|319766416|ref|YP_004131917.1| amidase [Geobacillus sp. Y412MC52]
gi|261376055|gb|ACX78798.1| Amidase [Geobacillus sp. Y412MC61]
gi|317111282|gb|ADU93774.1| Amidase [Geobacillus sp. Y412MC52]
Length = 470
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 192/412 (46%), Gaps = 47/412 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFG---HPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL G+ A+ D+ + T G H ++ T+SA TV+ L E GA GKT +
Sbjct: 72 PLHGIPIAIKDILYVANETTTMGSKIHRDFRPTYSA-----TVIEKLTEAGAVFPGKTNL 126
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
E+A+ N H+ NP P ++PGGSS G+ VA AA + SLG DT G +R+PS+
Sbjct: 127 HEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRIPSS 186
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCGI+G +P+YG VS G P++ SLD +G A K R ++L + + P
Sbjct: 187 FCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMA---KTARDAAYILEAVAGYDPKDPTST 243
Query: 234 IIADDCFELLKIPADRVVQVVI---------KSTEKLFGRQVLKHENLGEYFDS-KVPSL 283
+ + + + V++ I K E++ + + E G ++ ++P+L
Sbjct: 244 DAPATSYSTQFMESVKGVKIGIEPYFFDHVDKGVERVVKQAIASLEREGAVVETVRIPTL 303
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISE--TVIE- 340
+ + E+ ++ +HN IE + D ++ +L++ E + ++
Sbjct: 304 Q--YAQYAEMITILSEASAI----HHNHLIER-----EEDFGDDVRFLLKLGELPSAVDY 352
Query: 341 -NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG-------GKEMLSEDYQNRAFSL 392
+ IR ++ + +L+TPT + PPK+G G+E+ ++ +
Sbjct: 353 LEAQQIRLKLDREFMEVFNKVDVLITPTIPFLPPKIGQDTVWINGEEV---NFLDHIIRF 409
Query: 393 LSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+++G VTVP G+ P + I G+ +L+ V +++ +L +
Sbjct: 410 TGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILN-VADVFETLHPE 460
>gi|410473301|ref|YP_006896582.1| amidase [Bordetella parapertussis Bpp5]
gi|408443411|emb|CCJ50065.1| putative amidase [Bordetella parapertussis Bpp5]
Length = 449
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 166/386 (43%), Gaps = 29/386 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD+ G T G + AA R + VV L GA +G+T + EFA
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVAR-QGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFA 127
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A C
Sbjct: 128 YSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAALC 187
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL-----LQLPF-AAQRS 229
G+ GF+PS VS G++P+S +LD++G A + + +L +P AA R
Sbjct: 188 GLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDADIPAPAALRG 247
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R L +P + + F + K G D VP
Sbjct: 248 LR-----------LAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIVVPEFAQLAD 296
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N K + + + H + IE DP + A I ++S + + R
Sbjct: 297 INS--KGGFTAAEAWAW---HRDLIERAADRYDPRVVARIRRGADMSAADYIDLLAARQA 351
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVT 405
R+ + + + LV PT P + E + + +L ++ + ++
Sbjct: 352 WRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLINFLDGSALS 411
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P P + A +G DR +L
Sbjct: 412 LPCHEAGTAPVGLMVAAANGSDRHVL 437
>gi|33601974|ref|NP_889534.1| amidase [Bordetella bronchiseptica RB50]
gi|33576412|emb|CAE33490.1| putative amidase [Bordetella bronchiseptica RB50]
Length = 449
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 164/381 (43%), Gaps = 19/381 (4%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+ GL ++ DLFD+ G T G + AA R + VV L GA +G+T + EFA
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVAR-QDEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFA 127
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G VR+P+A C
Sbjct: 128 YSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAALC 187
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G+ GF+PS VS G++P+S +LD++G A + + +L A I +
Sbjct: 188 GLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAIL------AGGDDADIPV 241
Query: 236 ADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKTNGEL 293
L L +P + + F + K G D VP N
Sbjct: 242 PAALLGLRLAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIAVPEFAQLADINS-- 299
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
K + + + H + IE DP + A I ++S + + R R+ +
Sbjct: 300 KGGFTAAEAWAW---HRDLIERAADRYDPRVVARIRRGADMSAADYIDLLAARQAWRARV 356
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPLGY 410
+ + LV PT P + E + + +L ++ + +++P
Sbjct: 357 EARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLINFLDGSALSLPCHE 416
Query: 411 YDKCPTSVSFIARHGGDRFLL 431
P + A +G DR +L
Sbjct: 417 AGTAPVGLMVAAANGSDRRVL 437
>gi|306845188|ref|ZP_07477764.1| amidase [Brucella inopinata BO1]
gi|306274347|gb|EFM56154.1| amidase [Brucella inopinata BO1]
Length = 445
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 175/397 (44%), Gaps = 51/397 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DLFD+ G T G R A + +V L GA IGKT + EF
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGS-VVRRDAPLAGCDAPIVQRLRNAGAVIIGKTHMTEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P+A G
Sbjct: 111 AFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNG 170
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ + G P++ SLD+VG + R V +L A P I
Sbjct: 171 LVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILTDAVMAGEKP----IP 220
Query: 237 DDCFEL----LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNG 291
+ + + +P D ++ + F + E G D V L G
Sbjct: 221 PEALPVKGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDHLI------G 274
Query: 292 ELKNVMRL--IQRYEFKNNH-NEWIESVKPALDPD----------ISAEIGEMLEISETV 338
LK R+ I E + H + W+ DPD +S + LE +
Sbjct: 275 RLKEATRIGSIAGIEASHIHASTWLA------DPDANVDIRVKRPLSVRMKVPLEAYHAL 328
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----S 394
+E K++ EM +S + TP T P + E+Y +R SLL
Sbjct: 329 METRKTLAREMDERLSGF----DMFATPATPIVAPAIASVTHDEEEY-DRVESLLLRDTQ 383
Query: 395 IASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+A+ C +T+P+ K PT + AR+G D+ LL
Sbjct: 384 VANQFDLCSITLPMPGM-KLPTGLMLTARNGSDKRLL 419
>gi|116694449|ref|YP_728660.1| glutamyl/aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
gi|113528948|emb|CAJ95295.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
Length = 447
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 177/398 (44%), Gaps = 29/398 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWART--HSAASRTSTVVSTLVEGGATCIGKTVVD 114
PL G+ +V DLFD++G VT G AR AAS + V++ L GA +G+T +
Sbjct: 67 PLAGVPVSVKDLFDVQGDVTRAG----ARVLPERAASADAPVIARLRAAGAVFVGRTNMT 122
Query: 115 EFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
EFAYS G N HY TP NP ++PGGSSSGAAV+V + ++G DT G R+P+
Sbjct: 123 EFAYSGVGINPHYGTPRNPYDRQAGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSCRIPA 182
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFAAQRSPR 231
A CGI GF+P+ V G +P+S S D+VG A V V+ ++P A
Sbjct: 183 ALCGIAGFKPTARRVPLQGTVPLSPSYDSVGCLANTVACCAAVDAVMAGEVPPAGPAPLA 242
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ +A +L+ +D V +V ++ +L L + + +D L G G
Sbjct: 243 GLRLAVPTGLVLEGMSDEVAEVFSRTLRRLSAAGALLQDVSFDSWD----QLAGIGANGG 298
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI--RNEM 349
+ E H + DP + + I L + + + + R E+
Sbjct: 299 LVA--------AEASAWHGSLLAEQADRYDPRVLSRI--RLADGQRAADYLRMLQRRGEL 348
Query: 350 -RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL--SIASVSGCCQVTV 406
R A + L D + V PT P++ + + L +IA++ C ++V
Sbjct: 349 CRQADAELAGFDAV-VLPTVPVVAPRIADLDDDEAFFSTNRLLLRNPAIANMLDLCALSV 407
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
P P + RH DR LL + +L+ +
Sbjct: 408 PCHRPGDAPVGLMLFGRHLSDRRLLAIGMGIEGALRHE 445
>gi|261218573|ref|ZP_05932854.1| amidase [Brucella ceti M13/05/1]
gi|261320578|ref|ZP_05959775.1| amidase [Brucella ceti M644/93/1]
gi|260923662|gb|EEX90230.1| amidase [Brucella ceti M13/05/1]
gi|261293268|gb|EEX96764.1| amidase [Brucella ceti M644/93/1]
Length = 445
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 172/389 (44%), Gaps = 35/389 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G ++ DLFD+ G T G H A A + +V L GA IGKT +
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 108
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P+A
Sbjct: 109 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 168
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+P+ + G P++ SLD+VG + R V +L A P
Sbjct: 169 NGLVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILADAVMAGEKPILPE 222
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ + +P D ++ + F + E G D V L G L
Sbjct: 223 VLPVNGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 276
Query: 294 KNVMRLIQRYEFKNNH---NEWIESVKPALDPDI----SAEIGEMLEISETVIENCKSIR 346
K R+ + NH + W+ + +D + S I LE ++E K++
Sbjct: 277 KEATRIGSIAGIEANHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAYHALMETRKALA 336
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCC 402
EM +S + TP T P + E+Y +R +LL +A+ C
Sbjct: 337 REMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVENLLLRDTQVANQFDLC 391
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ K PT + AR+ D+ LL
Sbjct: 392 SITLPMPGM-KLPTGLMLTARNDSDKRLL 419
>gi|221065103|ref|ZP_03541208.1| Amidase [Comamonas testosteroni KF-1]
gi|220710126|gb|EED65494.1| Amidase [Comamonas testosteroni KF-1]
Length = 454
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 176/395 (44%), Gaps = 18/395 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL +V DLFDI G+ T G + A++T+ VV L GA +G T + EF
Sbjct: 69 PLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEF 127
Query: 117 AYSINGTNKHYDTPTNPAA----PSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
AYS G N HY TP NP ++PGGSSSGAA++V + ++G DT G VR+PS
Sbjct: 128 AYSGLGLNPHYGTPRNPWQRENDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVRIPS 187
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A CG+ GF+P+ V G++P+S +LD++G A + + VL + S +
Sbjct: 188 ALCGLTGFKPTARRVPMQGVLPLSANLDSIGPLAPSVRCCAALDAVL------SGESQGE 241
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-LKHENLGEYFDSKVPSLKGFHKTNG 291
+ A L P + V+ + + + R + L + + ++ VP + N
Sbjct: 242 LRAASLQGLRLLTPTNVVLDGMDSAVAAAWQRALSLLYAAGVQITEAVVPPFSELAQINA 301
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
K + + + +H + + DP + I +IS + R + +
Sbjct: 302 --KGGFTAAEAWAWHRSHIDGAGRLA-EYDPRVGTRILRGKDISAADYIELLARRQQWIA 358
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPL 408
+ + + D +++ PT PK+ E E Y +L ++ + C V++P
Sbjct: 359 RVQAQMADHDLMLMPTVPVIAPKIAELEASDEAYFAANGLMLRNPTLINFLDGCAVSLPC 418
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
+ P +S D+ LL + A L +
Sbjct: 419 HRPGEAPVGLSLAGTAAQDQRLLSVALAVEALLAQ 453
>gi|398385175|ref|ZP_10543200.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sphingobium sp. AP49]
gi|397721107|gb|EJK81657.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sphingobium sp. AP49]
Length = 459
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 169/380 (44%), Gaps = 19/380 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ G ++ DLFD+ G T G A S A+ + VV+ L + GA +GKT + EF
Sbjct: 82 PIDGAIVSIKDLFDVAGEPTRAGSLILA-DASPATVDAPVVARLKQAGAVIVGKTNMVEF 140
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP NPA +++PGGS+SG VAVA + + ++G DT G R+P+A CG
Sbjct: 141 AFSGVGANPHYGTPGNPADRARVPGGSTSGGGVAVADAMCEIAIGTDTGGSCRIPAALCG 200
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G++P+ V G P+S +LD++G A +L A +PR++ +A
Sbjct: 201 VVGYKPTKARVPTDGAFPLSPTLDSIGPIATSVDACFRTDAIL------AGETPRRLDLA 254
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKV-PSLKGFHKTNGELKN 295
IP + + + F + + G +V P +
Sbjct: 255 PLKGLRAGIPQGLPLADLDATVAARFADALARLGKAGVTLSDEVFPQFDAMQALQSPVP- 313
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
I E H + I + DP + A + +++ + R + ++ +
Sbjct: 314 ----IASIEAYAIHRDRIATRAQDFDPIVLARMQAGRDVTPERHRQMLAERTALVRSMDA 369
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSED-YQNRAFSLL---SIASVSGCCQVTVPLGYY 411
L +LV PTT P E+ + D + R LL + +V C +++PL
Sbjct: 370 RLAGLDMLVLPTTPIVAPTQ--AEVANPDIFVARNRLLLRNTGLGNVFDLCAISLPLPRQ 427
Query: 412 DKCPTSVSFIARHGGDRFLL 431
P + +AR G D+ L
Sbjct: 428 GGLPVGLMLMARAGQDQRLF 447
>gi|237798727|ref|ZP_04587188.1| hypothetical protein POR16_07822 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806160|ref|ZP_04592864.1| hypothetical protein POR16_36874 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021580|gb|EGI01637.1| hypothetical protein POR16_07822 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027273|gb|EGI07328.1| hypothetical protein POR16_36874 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 457
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 162/355 (45%), Gaps = 49/355 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + S ++PGGSSSG+AVAVAA +V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPLSDSTPRIPGGSSSGSAVAVAAGIVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+AF G++GFR + S G+ P++ +LD++G
Sbjct: 182 GSIRVPAAFNGLVGFRSTSRRYSRDGVFPLALTLDSIGPL-------------------- 221
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + S L + VL E + + G
Sbjct: 222 -TRSVRDALVIDDLLCARSKPSS-LIPRSLASQRFLVDKAVLDDERVEPAVRDNLLRAIG 279
Query: 286 FHKTNGELKNV---------MRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIG 329
G L V + LI+++ + H ++S LDP + +
Sbjct: 280 ILHAGGALIEVRPCQAFQATLLLIRQHGWLGAAEAFALHQPLLDSDAADQLDPRVRKRLE 339
Query: 330 EMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED 384
+ +++ N + R +++ +++ L D +L+TP+ A+ P L +L++D
Sbjct: 340 AARHMPASLLVNLYNAREQLQEQLAAEL-DGALLLTPSVAHVAPPLA--PLLADD 391
>gi|386824255|ref|ZP_10111392.1| amidase [Serratia plymuthica PRI-2C]
gi|386378839|gb|EIJ19639.1| amidase [Serratia plymuthica PRI-2C]
Length = 449
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 159/339 (46%), Gaps = 32/339 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DLFD+ G T G A++ + VV L++ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGS-RVLAAAPVAAKHAAVVERLLQAGAVVIGKTNMTEFA 128
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP ++PGGSSSGAAVAVA + S+G DT G VR+P+AFC
Sbjct: 129 YSGLGINPHYGTPANPWDRVVRRIPGGSSSGAAVAVAEGMCFGSIGSDTGGSVRIPAAFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQR------- 228
G+ GF+P+ +S G++P+S SLD++G A D + + + P Q
Sbjct: 189 GLTGFKPTARRISDGGLLPLSPSLDSIGVIAHDVAGCIVLDTAIAERPLQPQLKNLSQAR 248
Query: 229 -SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD-SKVPSLKGF 286
+ Q ++ DD E + +Q ++ + G Q+ +H E+ + + + + GF
Sbjct: 249 FAVPQTLVLDDLDEEVAAAFHLSLQRLVAA-----GAQI-EHIPCAEFAELAAINAAGGF 302
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
E H+ I DP + + I + E ++ + +R
Sbjct: 303 TA--------------LESWRWHHALIAEHAEEYDPRVLSRIRRGQPLGEGDLQQLRQLR 348
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDY 385
E + +++ ++ L+ PT P + G E + Y
Sbjct: 349 AEWQRRVTAAVQMFDALLMPTVPLVAPTIAGLEADEDAY 387
>gi|365895917|ref|ZP_09434011.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. STM 3843]
gi|365423289|emb|CCE06553.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. STM 3843]
Length = 450
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 178/410 (43%), Gaps = 49/410 (11%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP G+ +V DLFDI+G VT G + A + VV+ L G IG+T +
Sbjct: 68 APSRFAGIPVSVKDLFDIKGQVTRAGS-RALEDSAPADADAPVVARLRRAGFVVIGRTNM 126
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP + +PGGSSSGAAV++A + +LG DT G R+P
Sbjct: 127 TEFAYSGIGINPHYGTPKSAWKREVGHVPGGSSSGAAVSIADRMAYGALGTDTGGSCRIP 186
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+AF GI+G++P+ V G +P+ST+LD+ G A + + VL P + PR
Sbjct: 187 AAFNGIVGYKPTQRRVPLDGGVPLSTTLDSFGPLANTVECCAILDAVLADEPIKPLQ-PR 245
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG---------EYFDSKVPS 282
+ L +P V+ + + F R + LG E+ D +
Sbjct: 246 AV-----KGLRLAVPTTVVLDQLDAEVAQTFDRALETLSKLGALVERIEFPEFLDVGIIG 300
Query: 283 LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIE 340
+KG + Y + H I S DP +S I GE + + E IE
Sbjct: 301 MKGGFAAA----------ESYAW---HRFLITSKGDVYDPRVSVRIMRGEAITVPE-YIE 346
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG 400
R+ + A + + D LV PTTA PP+ +++ + AF +I ++
Sbjct: 347 MLAGRRSLVARAAARIAPYDA-LVMPTTANAPPR------IADLANDEAFGRENIRALRN 399
Query: 401 C--------CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C C +++P + P + G DR L + + ++
Sbjct: 400 CTMINMMDGCAISLPAHPAGEVPVGLMLAQSGGQDRKLFEIAAGIEGVIR 449
>gi|386361298|ref|YP_006059543.1| amidase [Thermus thermophilus JL-18]
gi|383510325|gb|AFH39757.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Thermus thermophilus JL-18]
Length = 434
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 166/385 (43%), Gaps = 43/385 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH-------PEWARTHSAASRTSTVVSTLVEGGATCIG 109
PL GL V DLF ++G T G PE AR V L E GA
Sbjct: 64 PLHGLPLTVKDLFPVKGMPTRAGTKAPLPPLPEEARA----------VRRLREAGALLFA 113
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KT +DE A I G N N PS+ GGSS G+AVAVA + SLG DT G +R
Sbjct: 114 KTNMDEIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIR 173
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQ 227
+P+ F G++GF+PSYG VS G +P+S S D G R + + +L +P A
Sbjct: 174 IPAGFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGESIPLEAV 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGF 286
++P + +P D + + K F R + L E + +P L+G
Sbjct: 234 QNP-----------VFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-LEGV 281
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
++ RL+ RYE H + ++ P + + L ++E + + R
Sbjct: 282 YEV------YTRLV-RYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDAVAER 334
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ---NRAFSLLSIA-SVSGCC 402
+R ++ L+ L+ P P P LG +E+ E + AF L++ S+ G
Sbjct: 335 EVLRLELAKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVP 394
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGD 427
+ +P + P + + +G D
Sbjct: 395 TLALPFAKVEGMPVGLQVVGAYGED 419
>gi|374574268|ref|ZP_09647364.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
gi|374422589|gb|EHR02122.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
Length = 449
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 177/400 (44%), Gaps = 31/400 (7%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P G+ ++ DLFDI+G VT G + S A + + V+ L + G IG+T +
Sbjct: 68 PSRYAGIPVSIKDLFDIKGQVTRAGSRALDDS-SPAEQDAPTVARLRKAGFVVIGRTNMT 126
Query: 115 EFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
EFAYS G N HY TP A +PGGSSSGAAV+V + +LG DT G R+P+
Sbjct: 127 EFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRIPA 186
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A+ G++G++P+ V G +P+S SLD++G AR + VL P A + PR
Sbjct: 187 AYNGVVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLANEPIAPLK-PRS 245
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG- 291
+ L +P + + + F R + + G + + FH
Sbjct: 246 VK-----GMRLAVPTTIALDDLDAAVAGTFERALKSLADHGAIIERI--EMAEFHDIGPM 298
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRNEM 349
K + Y + H + S DP +S I GE ++ + + NE
Sbjct: 299 NAKGGFAASESYAW---HRYLLTSKGDVYDPRVSVRIMRGEAQSAADYI-----DLLNER 350
Query: 350 RSAISSL---LKDDGILVTPTTAYPPPKLG----GKEMLSEDYQNRAFSLLSIASVSGCC 402
RS I+ + + LV PTTA PPK+ KE E+ RA ++ ++ C
Sbjct: 351 RSLITRVNARIAPYDALVLPTTANTPPKISDLADDKEFTRENL--RALRNCTLINMIDGC 408
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
+++P + P + G DR + + M A ++
Sbjct: 409 AISLPAHREGEIPVGLMLAGAGGSDRRIFELAAGMEAVIR 448
>gi|330835108|ref|YP_004409836.1| amidase [Metallosphaera cuprina Ar-4]
gi|329567247|gb|AEB95352.1| amidase [Metallosphaera cuprina Ar-4]
Length = 388
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 30/385 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+F V D+ + EG T G ++ R + +V ++ G T +GKT EF
Sbjct: 27 PLAGLTFGVKDVIETEGIKTTAGSR--ILRNNVPKRDAWIVKAILSAGGTILGKTNTHEF 84
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A T+ NP ++ GGSS G+AVAVA ++VD +G DT G +R+P++ CG
Sbjct: 85 AIGATNTSSLVGPARNPRDKERISGGSSGGSAVAVALNMVDVGVGTDTGGSIRIPASLCG 144
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G++PSYG G+IP S SLDT+G+ RD + L + LP + + Q + +
Sbjct: 145 VIGYKPSYGVFPTEGVIPFSWSLDTIGFLTRDLETLWMTIKGI--LPASKVKYFLQYVRS 202
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGELKN 295
+ RV + T K +VL E+F +SK +L+ K +++
Sbjct: 203 ----------SPRVGLFMFDETTKDVLEKVL------EFFPNSKEVNLRLMTKYGSQVR- 245
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R+I E + H W+++++ PD+ + + S N +R +
Sbjct: 246 --RIIAGSEGASYHTTWLKTMRDMYFPDVLKVLDSGQKTSAVDYINSLRMRKLILEEYVR 303
Query: 356 LLKDDGILVTPTTAYPPPKLG---GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
D ++++PTT PK+ GKE ++++ S+ + ++ G ++VP+
Sbjct: 304 TFNDFDVIISPTTKITAPKISEVLGKE---AEFRDGLVSITELFNLVGAPSISVPIMERQ 360
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNM 437
P + + D +L ++M
Sbjct: 361 GLPIGIMISGKPFSDGVVLGLAKHM 385
>gi|422651429|ref|ZP_16714224.1| hypothetical protein PSYAC_07615 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964507|gb|EGH64767.1| hypothetical protein PSYAC_07615 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 457
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 174/390 (44%), Gaps = 56/390 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGATCIGKTVVDE 115
P G+ A DLFD+ G VT G R + S A + V L G +GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAG--ATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSE 129
Query: 116 FAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FAYS G N H+ TP NP + S ++PGGSSSG+AVAVAA +V ++G DT G +R+P+A
Sbjct: 130 FAYSGLGLNPHFGTPINPKSDSSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAA 189
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
F G++GFR + S G+ P++ +LD+VG RS R
Sbjct: 190 FNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT---------------------RSVRDA 228
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
++ DD P ++ + L R VL+ E + + + G L
Sbjct: 229 LVIDDLLCARSKPTS-LLPRSLAGQRFLVDRAVLEDERVAPAVRDNLLRAVEALQAGGAL 287
Query: 294 ---------KNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIGEMLEISET 337
+ +++IQ++ + H ++S LDP + + + +
Sbjct: 288 IEMGHCQAFQATLQVIQQHGWLGAAEAFALHQPLLDSDAASQLDPRVRKRLEAARHMPAS 347
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEM-----LSEDYQNR 388
++ N + R ++ + +L D +L+TP+ A+ PP P L +E+ L+
Sbjct: 348 LLVNLYAARERLQEQL-TLELDGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRLTM 406
Query: 389 AFSLLSIASV---SGCCQVTVPLGYYDKCP 415
SLL++ V SGC +P G P
Sbjct: 407 PGSLLNMPGVSLPSGCDAAGLPTGLLLSAP 436
>gi|424059737|ref|ZP_17797228.1| hypothetical protein W9K_00851 [Acinetobacter baumannii Ab33333]
gi|404670475|gb|EKB38367.1| hypothetical protein W9K_00851 [Acinetobacter baumannii Ab33333]
Length = 369
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 182/392 (46%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEP-AHDDAEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ G +L+ + T +E K +R ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNGRLLKAAATTLEQVKQAEVVRAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF +L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTALVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCIDAMQ 369
>gi|456356560|dbj|BAM91005.1| amidase [Agromonas oligotrophica S58]
Length = 450
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 39/395 (9%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ +V DLFDI+G VT G + A + VV+ L G IG+T +
Sbjct: 68 APSPFAGIPVSVKDLFDIKGQVTRAGS-RALEDSAPADADAPVVARLRRAGFVVIGRTNM 126
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP + +PGGSSSGAAV+V + +LG DT G R+P
Sbjct: 127 TEFAYSGIGINPHYGTPKSAWKRDIGHVPGGSSSGAAVSVVDRMAYGALGTDTGGSCRIP 186
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA--AQRS 229
+AF GI+G++P+ V G +P+ST+LD+ G A + VL P A+R
Sbjct: 187 AAFNGIVGYKPTQARVPLDGGVPLSTTLDSFGPLANTVACCAVLDSVLADEPIRPLARRP 246
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQ--VLKHENLGEYFDSKVPSLKGFH 287
+ + +A +L V + ++ + L RQ +++ E+ D + +KG
Sbjct: 247 VKGLRLAVPTTVVLDELDAEVAETFERALDTL-ARQGALIERIAFPEFLDVGIIGMKGGF 305
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSI 345
+ Y + H + S DP +S I GE + + + IE
Sbjct: 306 AAA----------ESYAW---HRFLLASKGDVYDPRVSVRIARGEAITVPD-YIEMLNGR 351
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC---- 401
R+ + A + + D LV PTTA P ++++ ++ F+ +I S+ C
Sbjct: 352 RSLVTRAAARIAPYDA-LVMPTTANAAP------VIADLADDQVFARENIRSLRNCTFIN 404
Query: 402 ----CQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
C +++P + + P + G DR LL+
Sbjct: 405 MIDGCAISLPAHRHGEVPVGLMLAQSGGNDRKLLE 439
>gi|384220476|ref|YP_005611642.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium
japonicum USDA 6]
gi|354959375|dbj|BAL12054.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium
japonicum USDA 6]
Length = 449
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 184/410 (44%), Gaps = 49/410 (11%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTV 112
AP G+ ++ DLFDI+G VT G A SA A + + V+ L + G IG+T
Sbjct: 67 APSRYAGIPVSIKDLFDIKGQVTRAG--SRALDDSAPADQDAATVARLRKAGFVVIGRTN 124
Query: 113 VDEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFAYS G N HY TP A +PGGSSSGAAV+V + +LG DT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRI 184
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+AF GI+G++P+ V G +P+S SLD++G AR + VL P + P
Sbjct: 185 PAAFNGIVGYKPTQRRVPLDGSVPLSFSLDSIGPLARSVSCCAILDAVLANEPIVPPK-P 243
Query: 231 RQI----IIADDCFELLKIPADRVVQVVIKSTEKLFGR-QVLKHENLGEYFDSKVPSLKG 285
R + + L + AD V ++ + L V++ + E+ D + KG
Sbjct: 244 RPVKGMRLAVPTTIALDDLDAD-VASTFERALKSLADHGAVIERIEMAEFHDIGPMNAKG 302
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCK 343
+ + Y + H I + DP +S I GE ++ +
Sbjct: 303 GFAAS----------ESYAW---HRYLIAAKGDIYDPRVSVRIMRGEAQSAADYI----- 344
Query: 344 SIRNEMRSAISSL---LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG 400
+ NE RS I+ + + L+ PTTA PPK +S+ ++AF+ ++ ++
Sbjct: 345 DLLNERRSLIARVNARVAPYDALMLPTTANTPPK------ISDLADDKAFTRENLRALRN 398
Query: 401 C--------CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C C +++P P + G DR + + M A ++
Sbjct: 399 CTLINMIDGCAISLPAHREGDVPVGLMLAGAGGSDRRIFELAAGMEAVIR 448
>gi|375008395|ref|YP_004982028.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359287244|gb|AEV18928.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 470
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 190/412 (46%), Gaps = 47/412 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFG---HPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL G+ A+ DL + +T G H + +SA TV+ L E GA GKT +
Sbjct: 72 PLHGIPIAIKDLLYVADEMTTMGSKIHRNFRPAYSA-----TVIERLTEAGAVFPGKTNL 126
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
E+A+ N H+ NP P ++PGGSS G+ VA AA + SLG DT G +R+PS+
Sbjct: 127 HEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRIPSS 186
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCGI+G +P++G VS G P++ SLD +G K +R +VL + + P
Sbjct: 187 FCGIVGLKPTHGLVSKYGCFPLAWSLDHIGPMT---KTVRDAAYVLEAIAGYDPKDPTSF 243
Query: 234 IIADDCFELLKIPADRVVQVVI---------KSTEKLFGRQVLKHENLGEYFDS-KVPSL 283
+ L + + V++ I K EK + + E G ++ ++P+L
Sbjct: 244 AAPTTSYALTFKESVKGVKIGIEPYFFDHVDKEVEKAVKQAIASLEREGAVVETVRIPTL 303
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISE--TVIE- 340
+ + E+ ++ +HN +E + D ++ +L++ E + ++
Sbjct: 304 Q--YAQYAEMITILSEASTI----HHNHLVER-----EEDFGDDVRFLLKLGELPSAVDY 352
Query: 341 -NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG-------GKEMLSEDYQNRAFSL 392
+ IR ++ + +L+TPT + PPK+G G+E+ ++ +
Sbjct: 353 LEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEV---NFLDHIIRF 409
Query: 393 LSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+++G VTVP G+ P + I G+ +L+ V +++ +L +
Sbjct: 410 TGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILN-VADVFETLHPE 460
>gi|209546175|ref|YP_002278065.1| hypothetical protein Rleg2_5792 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209539032|gb|ACI58965.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 456
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDIEG T G A + A R + VV L + G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLATTAGSVVLA-ADAPAKRDAAVVGFLRQAGMVAIGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGINPHYGTPVNPRGNDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
GI+G++ + G + G+ P++ SLD++G F R K
Sbjct: 191 GIVGYKATRGRHAMDGVYPLARSLDSLGPFCRGVK 225
>gi|17545308|ref|NP_518710.1| amidase [Ralstonia solanacearum GMI1000]
gi|17427600|emb|CAD14119.1| probable amidase protein [Ralstonia solanacearum GMI1000]
Length = 448
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G VT G A SAA+ +T V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVTAAGSRALAH-QSAATSDATAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+P+AF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
C + GF+P+ V G +P+STSLD+ G A
Sbjct: 189 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLA 220
>gi|306842156|ref|ZP_07474825.1| amidase [Brucella sp. BO2]
gi|306287743|gb|EFM59174.1| amidase [Brucella sp. BO2]
Length = 471
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 173/395 (43%), Gaps = 47/395 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DLFD+ G T G R A + +V L GA IGKT + EF
Sbjct: 78 PLDGRIVSIKDLFDVAGEPTLAGS-VVRRDAPPAGCDAVIVQRLRNAGAVIIGKTHMTEF 136
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P+A G
Sbjct: 137 AFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNG 196
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ + G P++ SLD+VG + R V +L A P I
Sbjct: 197 LVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILTDAVMAGEKP----IP 246
Query: 237 DDCFEL----LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNG 291
+ + + +P D ++ + F + E G D V L G K
Sbjct: 247 PEALPVKGLRIALPKDYLLADMELDVAAHFEASLATLEKAGAIIADLAVDDLIGRLKE-- 304
Query: 292 ELKNVMRLIQRYEFKNNH-NEWIESVKPALDPD----------ISAEIGEMLEISETVIE 340
+ I E + H + W+ DPD +S + LE ++E
Sbjct: 305 --ATCIGSIAGIEASHIHASTWLA------DPDANVDIRVKRPLSVRMKVPLEAYHALME 356
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIA 396
K++ EM +S + TP T P + E+Y +R SLL +A
Sbjct: 357 TRKALAREMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVESLLLRDTQVA 411
Query: 397 SVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ C +T+P+ K PT + AR+G D+ LL
Sbjct: 412 NQFDLCSITLPMPDM-KLPTGLMLTARNGSDKRLL 445
>gi|377807684|ref|YP_004978876.1| amidase [Burkholderia sp. YI23]
gi|357938881|gb|AET92438.1| amidase [Burkholderia sp. YI23]
Length = 447
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 169/394 (42%), Gaps = 45/394 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH---PEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL G+ +V DLFD++G +T G PE AA+R + + L GA +G+T +
Sbjct: 67 PLAGVPISVKDLFDVQGEITRAGSRILPE-----QAATRDAPAIGRLRAAGAVFVGRTNM 121
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP NP +++PGGSSSGAAV+V + ++G DT G R+P
Sbjct: 122 TEFAYSGLGINPHYGTPANPFERHTARIPGGSSSGAAVSVTDGMAAAAIGSDTGGSCRIP 181
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL---------LQL 222
+A CG+ GF+P+ + G +P+S+S D++G A + ++ L
Sbjct: 182 AALCGLAGFKPTAARIPLQGALPLSSSYDSIGSIAPSVACCASLDSIMAGEAEAASIASL 241
Query: 223 PFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS 282
P R L +PA V+ + F R + + G
Sbjct: 242 PLTGLR--------------LAMPAHIVLDDMDAHVAATFERAIARLTAAGATVREVSFE 287
Query: 283 LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
T G+ ++ E H I+ DP + A I E S
Sbjct: 288 SWTHLATLGQHGGLV----AAEAWAWHVGLIKRHADDYDPRVIARIRLGSEHSTAEYLRN 343
Query: 343 KSIRNEM-RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIAS 397
+++R ++ R A L D I V PT P++ ++ E A LL SIA+
Sbjct: 344 RALREQLCRQADDELRPYDAI-VCPTVPIVAPRI--ADLDDEPAYTAANRLLLRNPSIAN 400
Query: 398 VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ C V++P P + + RH DR LL
Sbjct: 401 MLDLCAVSIPCHANGDAPVGLMLMGRHMSDRRLL 434
>gi|146276040|ref|YP_001166200.1| amidase [Novosphingobium aromaticivorans DSM 12444]
gi|145322731|gb|ABP64674.1| Amidase [Novosphingobium aromaticivorans DSM 12444]
Length = 408
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L A+ D DI G+ T G A A + V L + IGK + EFAY +
Sbjct: 39 LRVAIKDCIDIAGWQTRQGSAVLADVPPAIANAEVVTCILSDPRWRIIGKARMHEFAYGV 98
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
+G N TP NP P ++PGGSSSG+AVAVA+ L D ++G DT G VR+P+A CG++GF
Sbjct: 99 SGLNPACGTPINPFWPDRIPGGSSSGSAVAVASGLADVAIGTDTGGSVRMPAACCGVIGF 158
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ--LPFAAQRSP 230
+P++G VS G P +SLD +G FAR+ ++ + + +P RSP
Sbjct: 159 KPTFGLVSRRGAHPAKSSLDCIGIFAREMGLVEAMMETIAPGFVPATLSRSP 210
>gi|422644242|ref|ZP_16707380.1| hypothetical protein PMA4326_04349 [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330957794|gb|EGH58054.1| hypothetical protein PMA4326_04349 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 456
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 162/346 (46%), Gaps = 44/346 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P G+ A DLFD+ G VT G T S A + V L G +GKT + EF
Sbjct: 72 PFDGVPIAWKDLFDVAGCVTTAGA-ALRHTLSPALLDAPSVGLLARAGMISLGKTNLSEF 130
Query: 117 AYSINGTNKHYDTPTNPA--APSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N H+ TP NP A ++PGGSSSG+AVAVA+ +V ++G DT G +R+P+AF
Sbjct: 131 AYSGLGLNPHFGTPVNPLSDAVPRIPGGSSSGSAVAVASGIVPIAMGTDTAGSIRIPAAF 190
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---------DPKILRHVGHVLLQLPFA 225
G++GFR + S G+ P++ +LD+VG R D R LL A
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVIDDLLCARSKPTSLLPRSLA 250
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
QR ++ E ++ A V + ++++ E L L ++P +
Sbjct: 251 GQR----FLVDQAVLEDERV-APAVRENLLRAVEALRAGGALV----------ELPPCQA 295
Query: 286 FHKTNGELKNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIGEMLEISETV 338
F T ++LIQ + + H ++S LDP + + + ++
Sbjct: 296 FQAT-------LQLIQHHGWLGAAEAFALHQPLLDSDAANQLDPRVRKRLEAARSMPASL 348
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED 384
+ N S R ++ + +L D +L+TP+ A+ P L +L++D
Sbjct: 349 LVNLYSARETLQEQL-TLELDGALLLTPSVAHVAPPLA--PLLADD 391
>gi|171315681|ref|ZP_02904915.1| Amidase [Burkholderia ambifaria MEX-5]
gi|171099213|gb|EDT43986.1| Amidase [Burkholderia ambifaria MEX-5]
Length = 446
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 160/395 (40%), Gaps = 23/395 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G V FD EG+VT G A A + +VS L GA + +T + EF
Sbjct: 65 PLAGAVLTVKACFDCEGWVTHAGSRVLA-DEPPARTDAAMVSMLRRAGAVLVAQTAMTEF 123
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY G N+ Y TPT P A ++ GGSSSGAAV+VA D S+G DT G R+P+AF
Sbjct: 124 AYGALGVNRAYGTPTTPLDARRERVAGGSSSGAAVSVALGAADLSVGSDTSGSARIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI- 233
CG+ GF+PS G + G+ +STS D G A ++ R V L A +R P I
Sbjct: 184 CGVTGFKPSRGRYASDGMQFLSTSFDVPGLLAATVELCRQA-DVALHGRGAQRRRPATIR 242
Query: 234 ---IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
+ + F D V VV ++ + R + V +
Sbjct: 243 DLQFVVPEAFA-----TDDVDPVVGRAFDAWLSRLSAHGARIRRKRLDCVAEAGAVARAG 297
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
G + ++ R + + DP + A I ++ +
Sbjct: 298 GIIAAEAFMLHRARLATAADHY--------DPLVGARIAAGEQVRAHDYAAALLRLAALA 349
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLG--GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+ L D ++TPT PP++ E + RAF L A+ ++VP
Sbjct: 350 DTYHAELGDADAVLTPTVPMLPPRVADLADEAAYLERNTRAFRLTEFANRLDLPSISVPG 409
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
++ P + R D LLD + +L +
Sbjct: 410 DLRNRQPVGLLITGRRHEDARLLDVAAMVERALTD 444
>gi|381203203|ref|ZP_09910311.1| amidase [Sphingobium yanoikuyae XLDN2-5]
Length = 459
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 171/389 (43%), Gaps = 37/389 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ G ++ DLFD+ G T G A A + + VV+ L + GA +GKT + EF
Sbjct: 82 PIDGAIVSIKDLFDVAGEPTRAGSLILADAPPA-TVDAPVVARLKQAGAVIVGKTNMVEF 140
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP NPA +++PGGS+SG VAVA + + ++G DT G R+P+A CG
Sbjct: 141 AFSGVGVNPHYGTPGNPADRARVPGGSTSGGGVAVADAMCEIAIGTDTGGSCRIPAALCG 200
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA-------RDPKILRHVGHVLLQL-PFAAQR 228
++G++P+ V G P+S +LD++G A R IL L+L P R
Sbjct: 201 VVGYKPTKARVQTDGAFPLSPTLDSIGPIATSVDACFRTDAILAGEAPRRLELAPLKGLR 260
Query: 229 S--PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+ P+ + +AD + AD + Q + +V + + S VP
Sbjct: 261 AGIPQGLPLADLDATVAACFADALAQ--LGKAGMTLSDEVFPQFDAMQALQSPVP----- 313
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
I E H + I + DP + A + +++ R
Sbjct: 314 -------------IASVEAYAIHRDRIATRAQDFDPIVLARMQAGRDVTPERHRQMLVER 360
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED-YQNRAFSLL---SIASVSGCC 402
+ ++ + L D IL PTT P E+ + D + R LL + + C
Sbjct: 361 AALVRSMDARLADLDILALPTTPIVAPTQ--AEVANADAFVARNRLLLRNTGLGNSFDLC 418
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++PL P + +AR G DR L
Sbjct: 419 AISLPLPREGGLPVGLMLMARAGQDRRLF 447
>gi|37526114|ref|NP_929458.1| hypothetical protein plu2200 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785544|emb|CAE14493.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 447
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 161/358 (44%), Gaps = 32/358 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D FD++G VTG G +++ A T+ VV+TL++ G GK E
Sbjct: 71 PLHGIPFAVKDFFDLKGKVTGGGTNCFSQK---AYVTAPVVATLLKQGMILTGKHRAVEL 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
G ++ TP NP SQ PGGSS+G+AVAVAA L +L DT G R+P+A+
Sbjct: 128 GMGATGIMENSPTPLNPWGQSQRVAPGGSSNGSAVAVAAGLTPIALVTDTGGSARIPAAW 187
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ GFRPS G +S G++P+S ++DTVG A +H + + Q +P +
Sbjct: 188 CGVSGFRPSMGNLSSSGMLPLSQTMDTVGIIA------KHASDIFI---VYNQLNPN--L 236
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQV-LKHENLGEYFDS--KVPSLKGFHKTNG 291
C L I ++ S E + ++ L + +L E F V K F
Sbjct: 237 AYHSCINNLNIG-------ILPSEEYILDKETGLHYVSLLEVFSQMGMVTQKKPFPYPLS 289
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ +I +E N+ ++ + + +L I + EI E +R
Sbjct: 290 QCMKANSIITAFEAWQNYG-YLCNSQNSLSDTIKVRLERGKEIKEKEYSEALIFCRHVRK 348
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
S+ ++ LV PTT P + K D + + C V++P G
Sbjct: 349 IFSNWFQNVDALVIPTTPEPSWPIAEK-----DEHQPPNDFTRFVNFADLCAVSIPTG 401
>gi|421664600|ref|ZP_16104738.1| amidase [Acinetobacter baumannii OIFC110]
gi|421696747|ref|ZP_16136328.1| amidase [Acinetobacter baumannii WC-692]
gi|404560820|gb|EKA66058.1| amidase [Acinetobacter baumannii WC-692]
gi|408712104|gb|EKL57292.1| amidase [Acinetobacter baumannii OIFC110]
Length = 369
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLNVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K +R ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAATTLEQVKQAEVVRTQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|384086375|ref|ZP_09997550.1| amidohydrolase, AtzE family protein [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 465
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 150/337 (44%), Gaps = 26/337 (7%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ FAV +LFD+EG VT G R AS +T+V + GA +G +
Sbjct: 71 PGALAGVPFAVKNLFDVEGEVTLAGS-RINRRDDPASMDATLVQRMNSAGAVLLGALNMG 129
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY G N HY NP S+M GGSS G+ AVA +V +LG DT G +RVPS+
Sbjct: 130 EYAYDFTGENIHYGPSRNPHDGSRMTGGSSGGSGAAVAGGMVPIALGSDTNGSIRVPSSL 189
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSP 230
CGI GF+P+YG +S G P SLD VG AR L V VL + P + QR
Sbjct: 190 CGIFGFKPTYGRLSRAGTFPFCPSLDHVGPMARSVTDLARVYEVLQGYDHKDPASVQRDR 249
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHK-- 288
+I D + V Q+ I F +Q E KV G ++
Sbjct: 250 EPVISGLD---------EGVAQLKIAIAGGYFRKQA---STEAEQAIQKVADCLGVNEEV 297
Query: 289 ---TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCK 343
+ + LI E N H E + DPD+ + G +L S + +
Sbjct: 298 EIAGVAQARAAAYLITNAESSNLHLERLRRYAGDYDPDVRDRMLAGTLLPASWVI--QAQ 355
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
R+ R+ + + +L+ P T P++G + M
Sbjct: 356 RFRSYYRAELQKIFAKHDLLIAPATPMTAPQIGQRSM 392
>gi|383773292|ref|YP_005452358.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. S23321]
gi|381361416|dbj|BAL78246.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. S23321]
Length = 449
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 179/406 (44%), Gaps = 41/406 (10%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTV 112
AP G+ ++ DLFDI G VT G A SA A + + V+ L + G IG+T
Sbjct: 67 APSRYAGIPVSIKDLFDIRGQVTRAG--SRALDDSAPAEQDAATVARLRKAGFVVIGRTN 124
Query: 113 VDEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFAYS G N HY TP A +PGGSSSGAAV+V + +LG DT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRI 184
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+A+ GI+G++P+ V G +P+S SLD++G AR + VL P + P
Sbjct: 185 PAAYNGIVGYKPTQRRVPLDGSVPLSFSLDSIGPLARSVSCCAILDAVLANEPIVPLK-P 243
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
R + L +P + + F R + + G + + FH
Sbjct: 244 RPVK-----GMRLAVPTTIALDDLDAEVSATFERALKSLADHGAIIERI--EMAEFHDIG 296
Query: 291 G-ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRN 347
K + Y + H + S DP +S I GE ++ + + N
Sbjct: 297 PMNAKGGFAASESYAW---HRYLLTSKGDVYDPRVSVRILRGEAQSAADYI-----DLLN 348
Query: 348 EMRSAISSL---LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC--- 401
E RS I+ + L LV PTTA PPK+ L++D +AF+ ++ ++ C
Sbjct: 349 ERRSLIARVNARLAPYDALVLPTTANTPPKIAD---LADD---KAFTTENLRALRNCTLI 402
Query: 402 -----CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +++P + P + G DR + + M A ++
Sbjct: 403 NMIDGCAISLPAHREGEIPVGLMVAGAGGSDRRIFELAAGMEAVIR 448
>gi|385678337|ref|ZP_10052265.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Amycolatopsis sp.
ATCC 39116]
Length = 406
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 176/404 (43%), Gaps = 77/404 (19%)
Query: 30 IKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA 89
+ DFGA++E+ P P TG+ FAV D D+ G T G P H
Sbjct: 8 LSTDFGAYVERF-------------PLPETGIPFAVKDFLDVAGQTTRNGTPGLG--HHL 52
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTP--TNPAAPSQMPGGSSSGA 147
A+ + VV+ L G + +T V E A+S+ TP NP AP++ GGSS G+
Sbjct: 53 AAEDAEVVARLRAAGYVPVARTTVPELAWSVR-------TPGCRNPWAPNRDAGGSSGGS 105
Query: 148 AVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
AVAVA V +LG DT G +R+P+A CG+ G RP++G V G+ P+ S+DTVG AR
Sbjct: 106 AVAVATGDVPVALGTDTGGSIRIPAALCGVAGLRPTHGTVPVRGVTPLVPSMDTVGPIAR 165
Query: 208 DPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKI------PADRVVQVVIKSTEKL 261
A DC + +I PA V+ + +
Sbjct: 166 ---------------------------TAADCLTVHRILAGDGEPAPDTVEGLRLGWPEH 198
Query: 262 FGRQVLKHENLGEYFDSKVPSLK--GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPA 319
R + E L E +S +L+ G EL R + F E + A
Sbjct: 199 LWRGKIDPEVL-EVVESAAGTLRAAGVEIVPVELPLGARHARSAGFTTMLYESAQQWWQA 257
Query: 320 LDPDISA----EIGEM---LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPT---TA 369
D S IG++ +E+S + ++ E+ + ++ + L+ PT TA
Sbjct: 258 YSDDPSGLRGRAIGQLKAGIEVSRDDYDAARARAAEIAGEVDAVFTEVDALLMPTLPVTA 317
Query: 370 YPPP----KLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
P +LGG+ +E +N + L ++ASVSG +TVP G
Sbjct: 318 APADTDTVELGGR---AESLENAYYRLTALASVSGHPALTVPAG 358
>gi|288960643|ref|YP_003450983.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
gi|288912951|dbj|BAI74439.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
Length = 469
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 149/339 (43%), Gaps = 27/339 (7%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ AV +LFDI G T G R A+ + ++ L GA +G +
Sbjct: 70 PGPLAGVPVAVKNLFDIGGLPTRAGS-RINRDRPPATADAVLLRRLTAAGAVLVGGLNMG 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY G N H NP PS+M GGSSSG A AA L SLG DT G +RVPS+F
Sbjct: 129 EYAYDFTGENAHDGACRNPHDPSRMAGGSSSGCGAATAAGLAPLSLGSDTNGSIRVPSSF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLP-----FAAQRS 229
CGI G +P+YG ++ G P SLD +G FAR + L + + +LQ P A R
Sbjct: 189 CGIFGLKPTYGRLTRHGSFPFCDSLDHLGPFARSVRDL-ALAYDVLQGPAEGDHACAGRP 247
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS----KVPSLKG 285
+ A D L + ++ + G Q H+ + + +V L G
Sbjct: 248 VEPALPALDASGLDGL------RIAVAGGYFARGGQPEAHDAVARAAQALGTDRVVELPG 301
Query: 286 FHKTNGEL-KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENC 342
EL + +I E H E + + DPD G +L + V
Sbjct: 302 -----AELGRAAAYIITNAESSAFHLERLRTRAGDFDPDTRDRFLAGALLPAAWYV--QA 354
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
+ +R + +L ++ +L+ P T P +G K M+
Sbjct: 355 QRVRRWYHDRVMALFREVDVLLAPATPCTAPLVGRKTMV 393
>gi|218531927|ref|YP_002422743.1| allophanate hydrolase [Methylobacterium extorquens CM4]
gi|218524230|gb|ACK84815.1| allophanate hydrolase [Methylobacterium extorquens CM4]
Length = 611
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 191/463 (41%), Gaps = 27/463 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P++A T A T+ V L+ GA +GKT +D+F
Sbjct: 67 PLWGVPFAVKDNVDVAGLPTTAACPDFAYTPQA---TALAVERLLAAGAILVGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P+ +PGGSSSG+AVAVA LV F+LG DT G RVP+
Sbjct: 124 ATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA----RDPKILRHVGHVLLQLPF--AAQRSP 230
I+G +PS G+VS G++P +LDT+ FA + R + Q P+ A P
Sbjct: 184 IVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADTVFRIMAGYDPQDPYSRALPVPP 243
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
R + + A + S G + H G + L F
Sbjct: 244 RPGALPPGLRVGVPDAAGLIFAGDALSAAAFDGARADLHTVTGAAATAV--DLAPFFAVA 301
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
G L + +RY+ +IE AL P A IG S E+R
Sbjct: 302 GLLYAGPWVAERYQAIRG---FIEERPEALHPTTRAIIGAATGHSAADAFAGLYRLAELR 358
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF-SLLSIASVSGCCQVTVPLG 409
A ++ + +LV PT YP P+ N + + ++ C + VP
Sbjct: 359 RATEAVWRGIDVLVVPT--YPRPRRVADLAADPVGPNSELGTYTNFVNLLDLCALAVPGR 416
Query: 410 Y-YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAK 468
+ D P+ V+ IA G D + + ++A+ T + S
Sbjct: 417 FRTDGFPSGVTLIAPRGADGLIAELGARLHAAAG-----GTLGASGVPIPAEAASPGDRA 471
Query: 469 EKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLES 511
+ G++A D+ + + + + LNG + R A +L +
Sbjct: 472 KGGDRAQGDEIEIAVVGAHLSGLPLNGE----LTARGARFLRA 510
>gi|161618549|ref|YP_001592436.1| amidase [Brucella canis ATCC 23365]
gi|225852103|ref|YP_002732336.1| amidase [Brucella melitensis ATCC 23457]
gi|256264387|ref|ZP_05466919.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|260563637|ref|ZP_05834123.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260566837|ref|ZP_05837307.1| amidase [Brucella suis bv. 4 str. 40]
gi|261213589|ref|ZP_05927870.1| amidase [Brucella abortus bv. 3 str. Tulya]
gi|261221781|ref|ZP_05936062.1| amidase [Brucella ceti B1/94]
gi|261315204|ref|ZP_05954401.1| amidase [Brucella pinnipedialis M163/99/10]
gi|261317239|ref|ZP_05956436.1| amidase [Brucella pinnipedialis B2/94]
gi|261324697|ref|ZP_05963894.1| amidase [Brucella neotomae 5K33]
gi|261751907|ref|ZP_05995616.1| amidase [Brucella suis bv. 5 str. 513]
gi|261757795|ref|ZP_06001504.1| amidase [Brucella sp. F5/99]
gi|265988278|ref|ZP_06100835.1| amidase [Brucella pinnipedialis M292/94/1]
gi|265990694|ref|ZP_06103251.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994526|ref|ZP_06107083.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|265997745|ref|ZP_06110302.1| amidase [Brucella ceti M490/95/1]
gi|294851944|ref|ZP_06792617.1| aspartyl-tRNA(Asn)/glutamyl-tRNA amidotransferase subunit A
[Brucella sp. NVSL 07-0026]
gi|376274673|ref|YP_005115112.1| indoleacetamide hydrolase [Brucella canis HSK A52141]
gi|384210955|ref|YP_005600037.1| indoleacetamide hydrolase [Brucella melitensis M5-90]
gi|384408051|ref|YP_005596672.1| amidase [Brucella melitensis M28]
gi|161335360|gb|ABX61665.1| Indoleacetamide hydrolase [Brucella canis ATCC 23365]
gi|225640468|gb|ACO00382.1| Indoleacetamide hydrolase [Brucella melitensis ATCC 23457]
gi|260153653|gb|EEW88745.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260156355|gb|EEW91435.1| amidase [Brucella suis bv. 4 str. 40]
gi|260915196|gb|EEX82057.1| amidase [Brucella abortus bv. 3 str. Tulya]
gi|260920365|gb|EEX87018.1| amidase [Brucella ceti B1/94]
gi|261296462|gb|EEX99958.1| amidase [Brucella pinnipedialis B2/94]
gi|261300677|gb|EEY04174.1| amidase [Brucella neotomae 5K33]
gi|261304230|gb|EEY07727.1| amidase [Brucella pinnipedialis M163/99/10]
gi|261737779|gb|EEY25775.1| amidase [Brucella sp. F5/99]
gi|261741660|gb|EEY29586.1| amidase [Brucella suis bv. 5 str. 513]
gi|262552213|gb|EEZ08203.1| amidase [Brucella ceti M490/95/1]
gi|262765639|gb|EEZ11428.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|263001478|gb|EEZ14053.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
gi|263094681|gb|EEZ18460.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|264660475|gb|EEZ30736.1| amidase [Brucella pinnipedialis M292/94/1]
gi|294820533|gb|EFG37532.1| aspartyl-tRNA(Asn)/glutamyl-tRNA amidotransferase subunit A
[Brucella sp. NVSL 07-0026]
gi|326408598|gb|ADZ65663.1| amidase [Brucella melitensis M28]
gi|326538318|gb|ADZ86533.1| indoleacetamide hydrolase [Brucella melitensis M5-90]
gi|363403240|gb|AEW13535.1| Indoleacetamide hydrolase [Brucella canis HSK A52141]
Length = 445
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 173/389 (44%), Gaps = 35/389 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G ++ DLFD+ G T G H A A + +V L GA IGKT +
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 108
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P+A
Sbjct: 109 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 168
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+P+ + G P++ SLD+VG + R V +L A P
Sbjct: 169 NGLVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILADAVMAGEKPILPE 222
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ + +P D ++ + F + E G D V L G L
Sbjct: 223 VLPVNGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 276
Query: 294 KNVMRL--IQRYEFKNNH-NEWIESVKPALDPDI----SAEIGEMLEISETVIENCKSIR 346
K R+ I E + H + W+ + +D + S I LE ++E K++
Sbjct: 277 KEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAYHALMETRKALA 336
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCC 402
EM +S + TP T P + E+Y +R +LL +A+ C
Sbjct: 337 REMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVENLLLRDTQVANQFDLC 391
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ K PT + AR+ D+ LL
Sbjct: 392 SITLPMPGM-KLPTGLMLTARNDSDKRLL 419
>gi|62289541|ref|YP_221334.1| amidase [Brucella abortus bv. 1 str. 9-941]
gi|82699470|ref|YP_414044.1| amidase [Brucella melitensis biovar Abortus 2308]
gi|161511133|ref|NP_540277.2| amidase [Brucella melitensis bv. 1 str. 16M]
gi|189023798|ref|YP_001934566.1| amidase [Brucella abortus S19]
gi|237815038|ref|ZP_04594036.1| Indoleacetamide hydrolase [Brucella abortus str. 2308 A]
gi|260545702|ref|ZP_05821443.1| amidase [Brucella abortus NCTC 8038]
gi|260757562|ref|ZP_05869910.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260761387|ref|ZP_05873730.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|376273692|ref|YP_005152270.1| amidase [Brucella abortus A13334]
gi|384444672|ref|YP_005603391.1| Indoleacetamide hydrolase [Brucella melitensis NI]
gi|423167280|ref|ZP_17153983.1| hypothetical protein M17_00970 [Brucella abortus bv. 1 str. NI435a]
gi|423170343|ref|ZP_17157018.1| hypothetical protein M19_00876 [Brucella abortus bv. 1 str. NI474]
gi|423173577|ref|ZP_17160248.1| hypothetical protein M1A_00975 [Brucella abortus bv. 1 str. NI486]
gi|423177137|ref|ZP_17163783.1| hypothetical protein M1E_01379 [Brucella abortus bv. 1 str. NI488]
gi|423179774|ref|ZP_17166415.1| hypothetical protein M1G_00874 [Brucella abortus bv. 1 str. NI010]
gi|423182906|ref|ZP_17169543.1| hypothetical protein M1I_00875 [Brucella abortus bv. 1 str. NI016]
gi|423186152|ref|ZP_17172766.1| hypothetical protein M1K_00970 [Brucella abortus bv. 1 str. NI021]
gi|423189291|ref|ZP_17175901.1| hypothetical protein M1M_00973 [Brucella abortus bv. 1 str. NI259]
gi|62195673|gb|AAX73973.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615571|emb|CAJ10554.1| Amidase:ATP/GTP-binding site motif A (P-loop) [Brucella melitensis
biovar Abortus 2308]
gi|189019370|gb|ACD72092.1| Amidase [Brucella abortus S19]
gi|237789875|gb|EEP64085.1| Indoleacetamide hydrolase [Brucella abortus str. 2308 A]
gi|260097109|gb|EEW80984.1| amidase [Brucella abortus NCTC 8038]
gi|260667880|gb|EEX54820.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260671819|gb|EEX58640.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|349742668|gb|AEQ08211.1| Indoleacetamide hydrolase [Brucella melitensis NI]
gi|363401298|gb|AEW18268.1| amidase [Brucella abortus A13334]
gi|374541269|gb|EHR12765.1| hypothetical protein M19_00876 [Brucella abortus bv. 1 str. NI474]
gi|374541703|gb|EHR13197.1| hypothetical protein M17_00970 [Brucella abortus bv. 1 str. NI435a]
gi|374541817|gb|EHR13308.1| hypothetical protein M1A_00975 [Brucella abortus bv. 1 str. NI486]
gi|374549619|gb|EHR21061.1| hypothetical protein M1G_00874 [Brucella abortus bv. 1 str. NI010]
gi|374550138|gb|EHR21577.1| hypothetical protein M1I_00875 [Brucella abortus bv. 1 str. NI016]
gi|374551782|gb|EHR23212.1| hypothetical protein M1E_01379 [Brucella abortus bv. 1 str. NI488]
gi|374557834|gb|EHR29229.1| hypothetical protein M1M_00973 [Brucella abortus bv. 1 str. NI259]
gi|374559540|gb|EHR30928.1| hypothetical protein M1K_00970 [Brucella abortus bv. 1 str. NI021]
Length = 438
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 173/389 (44%), Gaps = 35/389 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G ++ DLFD+ G T G H A A + +V L GA IGKT +
Sbjct: 45 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 101
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P+A
Sbjct: 102 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 161
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+P+ + G P++ SLD+VG + R V +L A P
Sbjct: 162 NGLVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILADAVMAGEKPILPE 215
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ + +P D ++ + F + E G D V L G L
Sbjct: 216 VLPVNGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 269
Query: 294 KNVMRL--IQRYEFKNNH-NEWIESVKPALDPDI----SAEIGEMLEISETVIENCKSIR 346
K R+ I E + H + W+ + +D + S I LE ++E K++
Sbjct: 270 KEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAYHALMETRKALA 329
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCC 402
EM +S + TP T P + E+Y +R +LL +A+ C
Sbjct: 330 REMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVENLLLRDTQVANQFDLC 384
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ K PT + AR+ D+ LL
Sbjct: 385 SITLPMPGM-KLPTGLMLTARNDSDKRLL 412
>gi|92118200|ref|YP_577929.1| amidase [Nitrobacter hamburgensis X14]
gi|91801094|gb|ABE63469.1| Amidase [Nitrobacter hamburgensis X14]
Length = 449
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 173/392 (44%), Gaps = 33/392 (8%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFDI+G V+ G AA+ + VV+ L G IG+T +
Sbjct: 67 APSPFAGIPVSIKDLFDIKGQVSRAGSRALDDAPPAAN-DAPVVARLRRAGFVVIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTN--PAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP N +PGGSSSGAAV++ + +LG DT G R+P
Sbjct: 126 TEFAYSGLGINPHYGTPKNRWQRDVGHVPGGSSSGAAVSITDGMAHGALGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A+CGI+G++P+ + G +P+S +LD+ G AR + VL P A PR
Sbjct: 186 AAYCGIVGYKPTARRIPLDGGVPLSVTLDSYGPIARSVGCCAAMDAVLADEPIAPV-VPR 244
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKTN 290
+ L +P ++ + + + F + + N G + VP
Sbjct: 245 PVK-----GLRLAMPTTVMLDDLSSAVARAFEHALDRLANAGAVIERIAVPEFAEVAA-- 297
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRNE 348
+NV E H I DP + + I GE L ++ V + ++R
Sbjct: 298 ---RNVGGGFSAAESWAWHRALIAKKAELYDPRVISRIRHGESLSAADYV--DLLAVRRA 352
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC------- 401
+ + + L+ PT A PP ++++ + A++ ++ S+ C
Sbjct: 353 IIAGFERRVAPYDALIAPTVAITPP------VIADLAHDAAYAKANMLSLRNCALINILD 406
Query: 402 -CQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
C +++P + P + A G DR + +
Sbjct: 407 GCAISLPCHREGEAPVGLMLAAAGGSDRRIFE 438
>gi|445474084|ref|ZP_21453129.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC338]
gi|444768353|gb|ELW92569.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC338]
Length = 369
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 181/392 (46%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLNVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ ++T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAQTTLEQVKQAEVVKAQLTEELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|260554862|ref|ZP_05827083.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|260411404|gb|EEX04701.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|452947711|gb|EME53198.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii MSP4-16]
Length = 369
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 181/392 (46%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
+ V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 IKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLNVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + F+++H D +F +D +Q
Sbjct: 338 SEGLPVGLQFVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|441209590|ref|ZP_20974275.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mycobacterium
smegmatis MKD8]
gi|440627081|gb|ELQ88901.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mycobacterium
smegmatis MKD8]
Length = 413
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 184/393 (46%), Gaps = 36/393 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV DLFD+ G T G T + A + V+ L GA +GKTV+ EF
Sbjct: 35 PLQGIPVAVKDLFDMAGLPTTCGSASSFGT-ARADIDAEVIGDLRRSGAVIVGKTVLHEF 93
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+ G + NP ++ GGSS G+AVAVA+ +V SLG DT G VRVP+A CG
Sbjct: 94 AFGATGDRSAHGPSRNPHDRLRVSGGSSGGSAVAVASGMVPLSLGTDTAGSVRVPAALCG 153
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRHVGHVLLQLPFAAQRSPRQI 233
++GF+P++ +S G+ P++ SLD VG F D K L + +L +P
Sbjct: 154 VVGFKPAFDVISVKGVHPLAPSLDHVGLFGASLADTKPL----YEILSSTTMKDTAPLSR 209
Query: 234 I--IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
I I D P D + + R L+ +G + ++ G+ G
Sbjct: 210 IGWIEPDAIA----PTDTEITAAV--------RDALRRAGIG--VAAATSTVSGYDP--G 253
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
EL ++ +Q E + H + +++ + +DP + A + ++++ + + R R+
Sbjct: 254 ELFSIFTALQAREAYDVHRDHLDADEHLIDPGVFARLRVGQTVTDSAFADAQRARRGFRA 313
Query: 352 AISSLLKDDGILVTPTTAYPPP-------KLGGKEMLSEDYQNRAFSLLSIASVSGCCQV 404
+ + L + G+L P+T P ++GGK + D + SL S +++G +
Sbjct: 314 VVDAALDEYGVLALPSTPITAPLLHQTTTEIGGKTV---DTRAALLSLTSPWNLTGSPAI 370
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
++P G+ P + IA G + L T +
Sbjct: 371 SIPGGHLHGLPFGIQLIASPGQEALLFATAAQI 403
>gi|389877134|ref|YP_006370699.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Tistrella mobilis
KA081020-065]
gi|388527918|gb|AFK53115.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Tistrella mobilis
KA081020-065]
Length = 452
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 175/400 (43%), Gaps = 43/400 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G T G + + A + +V+ L GA GKT + EF
Sbjct: 71 PLAGLPISIKDLFDVAGETTMAGS-VVMKDAAPAMADAPIVARLRAAGAVITGKTNMTEF 129
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP N ++PGGSS+GA ++V + ++G DT G +R+P+ F G
Sbjct: 130 AFSGVGLNPHYGTPGNVFDADRIPGGSSAGAGISVVKGMAAAAIGTDTGGSIRIPANFAG 189
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I+GF+PS V G +P+S++ D++G A P A + ++A
Sbjct: 190 IVGFKPSQARVPLEGALPLSSTQDSIGPLA----------------PTVACCALVDAVLA 233
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK--GFHKTNGELK 294
+ +L+ A + + + G + + +D+ + L+ G EL
Sbjct: 234 GEAPRILRPRAPETLTFAVARGLPMDG----VDDQVANAYDAALKRLRDAGVRLIELELP 289
Query: 295 NVMRLIQ--------RYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKS 344
+ + Q E H I++ DP + + I GE + ++ + +
Sbjct: 290 EIAEVPQLNAAGGFSAAESWAWHRAIIQTGAERYDPRVLSRIRRGEAMGAADYI--DLIK 347
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVS 399
R M +A L+ L+ PT PP++ L++D +LL + +V
Sbjct: 348 RRRRMVAAADLALRPFDALLMPTVPIVPPRIAD---LADDADYTRLNLLVLRNPTFGNVL 404
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
C VT+P+ P + + R+G D LLD + A
Sbjct: 405 DLCGVTLPIAEPGALPAGLMLLGRNGADHDLLDVAAGVEA 444
>gi|184158296|ref|YP_001846635.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ACICU]
gi|332875666|ref|ZP_08443477.1| Amidase [Acinetobacter baumannii 6014059]
gi|384132404|ref|YP_005515016.1| Glu-tRNA amidotransferase [Acinetobacter baumannii 1656-2]
gi|384143403|ref|YP_005526113.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii MDR-ZJ06]
gi|385237733|ref|YP_005799072.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii TCDC-AB0715]
gi|387123750|ref|YP_006289632.1| amidase [Acinetobacter baumannii MDR-TJ]
gi|407933002|ref|YP_006848645.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii TYTH-1]
gi|416148268|ref|ZP_11602259.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AB210]
gi|417568395|ref|ZP_12219258.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC189]
gi|417577859|ref|ZP_12228696.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-17]
gi|417871639|ref|ZP_12516569.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH1]
gi|417873616|ref|ZP_12518483.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH2]
gi|417878107|ref|ZP_12522739.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH3]
gi|417883870|ref|ZP_12528080.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH4]
gi|421204226|ref|ZP_15661355.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC12]
gi|421534365|ref|ZP_15980638.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC30]
gi|421629130|ref|ZP_16069873.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC180]
gi|421688851|ref|ZP_16128546.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-143]
gi|421703775|ref|ZP_16143232.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1122]
gi|421707558|ref|ZP_16146950.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1219]
gi|421790568|ref|ZP_16226769.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-2]
gi|424052179|ref|ZP_17789711.1| hypothetical protein W9G_00868 [Acinetobacter baumannii Ab11111]
gi|424063678|ref|ZP_17801163.1| hypothetical protein W9M_00961 [Acinetobacter baumannii Ab44444]
gi|425752895|ref|ZP_18870794.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-113]
gi|445474976|ref|ZP_21453232.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-78]
gi|183209890|gb|ACC57288.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ACICU]
gi|322508624|gb|ADX04078.1| Glu-tRNA amidotransferase [Acinetobacter baumannii 1656-2]
gi|323518233|gb|ADX92614.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii TCDC-AB0715]
gi|332736144|gb|EGJ67160.1| Amidase [Acinetobacter baumannii 6014059]
gi|333365041|gb|EGK47055.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AB210]
gi|342224815|gb|EGT89831.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH1]
gi|342230814|gb|EGT95638.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH2]
gi|342233699|gb|EGT98411.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH3]
gi|342234968|gb|EGT99597.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH4]
gi|347593896|gb|AEP06617.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii MDR-ZJ06]
gi|385878242|gb|AFI95337.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acinetobacter baumannii MDR-TJ]
gi|395554690|gb|EJG20692.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC189]
gi|395568556|gb|EJG29226.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-17]
gi|398326386|gb|EJN42535.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC12]
gi|404559690|gb|EKA64942.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-143]
gi|404671629|gb|EKB39471.1| hypothetical protein W9G_00868 [Acinetobacter baumannii Ab11111]
gi|404674036|gb|EKB41801.1| hypothetical protein W9M_00961 [Acinetobacter baumannii Ab44444]
gi|407191596|gb|EKE62792.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1122]
gi|407191939|gb|EKE63127.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1219]
gi|407901583|gb|AFU38414.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii TYTH-1]
gi|408703273|gb|EKL48672.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC180]
gi|409987570|gb|EKO43750.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC30]
gi|410405628|gb|EKP57664.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-2]
gi|425498545|gb|EKU64619.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-113]
gi|444779577|gb|ELX03559.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-78]
Length = 369
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 181/392 (46%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLNVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ ++T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAQTTLEQVKQAEVVKAQLTEELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|225627080|ref|ZP_03785118.1| Indoleacetamide hydrolase [Brucella ceti str. Cudo]
gi|340790211|ref|YP_004755676.1| amidase [Brucella pinnipedialis B2/94]
gi|17983355|gb|AAL52541.1| glutamyl-tRNA(gln) amidotransferase subunit a [Brucella melitensis
bv. 1 str. 16M]
gi|225617915|gb|EEH14959.1| Indoleacetamide hydrolase [Brucella ceti str. Cudo]
gi|340558670|gb|AEK53908.1| amidase [Brucella pinnipedialis B2/94]
Length = 471
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 173/389 (44%), Gaps = 35/389 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G ++ DLFD+ G T G H A A + +V L GA IGKT +
Sbjct: 78 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 134
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P+A
Sbjct: 135 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 194
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+P+ + G P++ SLD+VG + R V +L A P
Sbjct: 195 NGLVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILADAVMAGEKPILPE 248
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ + +P D ++ + F + E G D V L G L
Sbjct: 249 VLPVNGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 302
Query: 294 KNVMRL--IQRYEFKNNH-NEWIESVKPALDPDI----SAEIGEMLEISETVIENCKSIR 346
K R+ I E + H + W+ + +D + S I LE ++E K++
Sbjct: 303 KEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAYHALMETRKALA 362
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCC 402
EM +S + TP T P + E+Y +R +LL +A+ C
Sbjct: 363 REMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVENLLLRDTQVANQFDLC 417
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ K PT + AR+ D+ LL
Sbjct: 418 SITLPMPGM-KLPTGLMLTARNDSDKRLL 445
>gi|424884582|ref|ZP_18308197.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393178281|gb|EJC78321.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 456
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DL+DIEG VT G A + A R + VV+ L + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLYDIEGLVTTAGSVVLA-ADAPAKRDAAVVNLLRQAGMIAVGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGINPHYGTPVNPRGSDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
GI+G++ + G + G+ P++ SLD++G R+
Sbjct: 191 GIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRN 223
>gi|213971106|ref|ZP_03399225.1| amidase family protein [Pseudomonas syringae pv. tomato T1]
gi|213924095|gb|EEB57671.1| amidase family protein [Pseudomonas syringae pv. tomato T1]
Length = 442
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 173/390 (44%), Gaps = 56/390 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGATCIGKTVVDE 115
P G+ A DLFD+ G VT G R + S A + V L G +GKT + E
Sbjct: 57 PFDGVPVAWKDLFDVAGCVTTAG--ATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSE 114
Query: 116 FAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FAYS G N H+ TP NP + ++PGGSSSG+AVAVAA +V ++G DT G +R+P+A
Sbjct: 115 FAYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAA 174
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
F G++GFR + S G+ P++ +LD+VG RS R
Sbjct: 175 FNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT---------------------RSVRDA 213
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
++ DD P ++ + L R VL+ E + + + G L
Sbjct: 214 LVIDDLLCARSKPTS-LLPRSLAGQRFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 272
Query: 294 ---------KNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIGEMLEISET 337
+ +++IQ++ + H ++S LDP + + + +
Sbjct: 273 IEMGHCQAFQATLQVIQQHGWLGATEAFALHQSLLDSDAASQLDPRVRKRLEAARHMPAS 332
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEM-----LSEDYQNR 388
++ N + R ++ + +L D +L+TP+ A+ PP P L +E+ L+
Sbjct: 333 LLVNLYAARERLQEQL-TLELDGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRLTM 391
Query: 389 AFSLLSIASV---SGCCQVTVPLGYYDKCP 415
SLL++ V SGC +P G P
Sbjct: 392 PGSLLNMPGVSLPSGCDASGLPTGLLLSAP 421
>gi|116255628|ref|YP_771461.1| hypothetical protein pRL110427 [Rhizobium leguminosarum bv. viciae
3841]
gi|115260276|emb|CAK03380.1| half-amidase [Rhizobium leguminosarum bv. viciae 3841]
Length = 456
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 94/152 (61%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDIEG T G A+ + A R + VV+ L + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLAK-NMPAKRDAAVVALLRQAGMVAVGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G + G+ P++ SLD++G R
Sbjct: 191 GIVGYKATRGRHAMAGVYPLAKSLDSLGPLCR 222
>gi|159185658|ref|NP_357361.2| hypothetical protein Atu3243 [Agrobacterium fabrum str. C58]
gi|159140792|gb|AAK90146.2| glutamyl-tRNA amidotransferase subunit A [Agrobacterium fabrum str.
C58]
Length = 453
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 94/152 (61%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG T G + + ASR + VV+ L + G IG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGMPTTAGSKVLS-DDAPASRDADVVAALKQAGMVSIGRTNMSEFA 128
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSGA V VAA LV ++G DT G VR+P+AF
Sbjct: 129 FSGLGINPHYGTPRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G++ S G S G+ P++ SLD++G R
Sbjct: 189 GVVGYKASRGRYSMHGVYPLAKSLDSLGPLTR 220
>gi|56419927|ref|YP_147245.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
kaustophilus HTA426]
gi|56379769|dbj|BAD75677.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
kaustophilus HTA426]
Length = 470
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 190/412 (46%), Gaps = 47/412 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFG---HPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL G+ A+ D+ + T G H + T+SA TV+ L E GA GKT +
Sbjct: 72 PLHGIPIAIKDILYVANETTTMGSKIHRNFRPTYSA-----TVIEKLTEAGAVFPGKTNL 126
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
E+A+ N H+ NP P ++PGGSS G+ VA AA + SLG DT G +R+PS+
Sbjct: 127 HEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRIPSS 186
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCGI+G +P+YG VS G P++ SLD +G A K R ++L + + P
Sbjct: 187 FCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMA---KTARDAAYILEAMAGYDPKDPTST 243
Query: 234 IIADDCFELLKIPADRVVQVVI---------KSTEKLFGRQVLKHENLGEYFDS-KVPSL 283
+ + + + V++ I + E+ + + E G ++ ++P+L
Sbjct: 244 DAPATSYSTQFMESVKGVKIGIEPYFFDHVDEGVERAVKQAIASLEREGAVVETVRIPTL 303
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISE--TVIE- 340
+ + E+ ++ +HN +E + D ++ +L++ E + ++
Sbjct: 304 Q--YAQYAEMITILSEASAI----HHNHLVER-----EEDFGDDVRFLLKLGELPSAVDY 352
Query: 341 -NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG-------GKEMLSEDYQNRAFSL 392
+ IR ++ + +L+TPT + PPK+G G+E+ ++ +
Sbjct: 353 LEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEV---NFLDHIIRF 409
Query: 393 LSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+++G VTVP G+ P + I G+ +L+ V +++ +L +
Sbjct: 410 TGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILN-VADVFETLHPE 460
>gi|325914412|ref|ZP_08176759.1| amidohydrolase, AtzE family [Xanthomonas vesicatoria ATCC 35937]
gi|325539420|gb|EGD11069.1| amidohydrolase, AtzE family [Xanthomonas vesicatoria ATCC 35937]
Length = 486
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 165/380 (43%), Gaps = 40/380 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ F V DLFD+ G VT G A+ + A+R + VV L + GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAAIRAQC-APATRDAAVVQRLCDAGAVLVGTANMDEFA 166
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG+
Sbjct: 167 YGFATVNAHYGTTANPHDHRHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGV 226
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++GA+ G+ P +LD VG FA +R V
Sbjct: 227 YGLRPTHGALPLEGVFPFVDALDVVGPFATSVADVRRV---------------------- 264
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS-LKGFHKTNG-ELKN 295
+E++ A V +L G NL D+ + + L H T EL
Sbjct: 265 --YEVMHGHALHSCNVANLRIARLGG---WFQRNLDPELDAGIGALLAACHSTTLIELPQ 319
Query: 296 VMR------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
R ++ E + H + + DP + L++ + + + +
Sbjct: 320 AERARAAAFVLTAAEGGHRHRAALGTHGDQFDPATRDRLLAGLQLPASAVADARRFAQWF 379
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----VSGCCQVT 405
R+A+ L D +L+ P T P++ ++ + A + L I + ++GC +
Sbjct: 380 RAAMQQLWDDVDVLIAPATPCVAPRIDQDTIVIDGLPVSARANLGIFTQPLGLAGCPVLA 439
Query: 406 VPLGYYDKCPTSVSFIARHG 425
PL + P V IA G
Sbjct: 440 APLPRPGRLPLGVQLIAAPG 459
>gi|365855896|ref|ZP_09395928.1| Amidase [Acetobacteraceae bacterium AT-5844]
gi|363718689|gb|EHM02021.1| Amidase [Acetobacteraceae bacterium AT-5844]
Length = 453
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 168/381 (44%), Gaps = 17/381 (4%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+AP P G+ ++ DLFD EG T G + A+ T+ VV+ L G +G+T
Sbjct: 67 RAPSPWAGIPISIKDLFDQEGVRTRAGSVAL-KDAPVATATAPVVARLQRAGFVVLGRTN 125
Query: 113 VDEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFA+S G N HY TP +P A ++PGGSSSGAAVAVA + +LG DT G R
Sbjct: 126 MVEFAFSGLGVNPHYGTPRSPYDRATGRLPGGSSSGAAVAVADGMGLGALGSDTGGSCRA 185
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+A CGI+G++P+ V G++P+S SLD++G A + ++ A +P
Sbjct: 186 PAALCGIVGYKPTAKRVPLEGVLPLSFSLDSIGPLANTVGCCAILHGLMAGEEEVAPPAP 245
Query: 231 RQIIIADDCFELLKIPADR-VVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R + +P D + + + + F + + E G + +P L
Sbjct: 246 RSV-----AGLRFGVPEDSYLFEGLEPAVVTAFQSALARLEAAGARIERFAIPELADIPL 300
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N V ++ Y + H + IE P D I A I + R
Sbjct: 301 ANATGGFVA--MESYAW---HRKLIEKAGPEYDQRILARIMRGATVGAADYIELMKERER 355
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC--CQVTV 406
+ +A++ ++ PT A PP + + + E + L + A+ + C ++V
Sbjct: 356 IIAAVAPRTAPYDAILCPTCAVTPPAISAVDEVDEYNRINLLILRNTAAFNFLDRCSISV 415
Query: 407 PLGYYDKCPTSVSFIARHGGD 427
P + P + H GD
Sbjct: 416 PCHAPGEAPVGLMLTGAHDGD 436
>gi|339021337|ref|ZP_08645440.1| amidase [Acetobacter tropicalis NBRC 101654]
gi|338751567|dbj|GAA08744.1| amidase [Acetobacter tropicalis NBRC 101654]
Length = 449
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 168/398 (42%), Gaps = 36/398 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V DLFD+EG VT G A+R + VV L GA + +DEF
Sbjct: 65 PLAGVPFGVKDLFDLEGQVTTAGSVVL-NNSPPATRDAEVVQRLCAAGAIPVASLNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP P ++ GGSS G+A AVAA+L+ F+LG DT G +RVP++ CG
Sbjct: 124 AYGFATENAHYGTTRNPHDPQRLAGGSSGGSAAAVAANLLPFTLGSDTNGSIRVPASLCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQRSPRQII 234
+ G RP+ G V G+ P + SLD +G FA++ +R V VL+ L + S +
Sbjct: 184 VWGLRPTQGLVPLAGVYPFACSLDVIGPFAQNVADIRSVSEVLIGQSLAYKGDVSALSVG 243
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
I D F D V + Q + L E ++ S
Sbjct: 244 ILDGWFA-----QDLTSGVAAGMSAIQAACQHTQTITLPEVARARAASF----------- 287
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
+I E N H ++ A DP + + + + +RN R +
Sbjct: 288 ----VITAAEGGNLHLNRLKVEPMAYDPATRDRLMAGALLPSAAVIQAQRVRNWFREIMH 343
Query: 355 SLLKDDGILVTPTTAYPPPKL-------GGKEMLSEDYQNRAFSLLSIASVSGCCQVTVP 407
+ ILV P T P P+L GGK + + LS+A + P
Sbjct: 344 EAFRKVDILVAPATVGPAPRLDQPTIMVGGKAVSARANLGLFTQPLSLAGMPVLSAPLSP 403
Query: 408 LGYYDK-CPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
D P V FIA G + LL +A + EQ
Sbjct: 404 GNDVDTPLPLGVQFIAAPGKENTLL-----AFAEMLEQ 436
>gi|302132260|ref|ZP_07258250.1| hypothetical protein PsyrptN_12753 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 457
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 173/390 (44%), Gaps = 56/390 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGATCIGKTVVDE 115
P G+ A DLFD+ G VT G R + S A + V L G +GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAG--ATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSE 129
Query: 116 FAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FAYS G N H+ TP NP + ++PGGSSSG+AVAVAA +V ++G DT G +R+P+A
Sbjct: 130 FAYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAA 189
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
F G++GFR + S G+ P++ +LD+VG RS R
Sbjct: 190 FNGLVGFRSTTRRYSRDGVFPLALTLDSVGPLT---------------------RSVRDA 228
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
++ DD P ++ + L R VL+ E + + + G L
Sbjct: 229 LVIDDLLCARSKPTS-LLPRSLAGQRFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 287
Query: 294 ---------KNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIGEMLEISET 337
+ +++IQ++ + H ++S LDP + + + +
Sbjct: 288 IEMGHCQAFQATLQVIQQHGWLGATEAFALHQSLLDSDAASQLDPRVRKRLEAARHMPAS 347
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEM-----LSEDYQNR 388
++ N + R ++ + +L D +L+TP+ A+ PP P L +E+ L+
Sbjct: 348 LLVNLYAARERLQEQL-TLELDGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRLTM 406
Query: 389 AFSLLSIASV---SGCCQVTVPLGYYDKCP 415
SLL++ V SGC +P G P
Sbjct: 407 PGSLLNMPGVSLPSGCDASGLPTGLLLSAP 436
>gi|222081229|ref|YP_002540592.1| hypothetical protein Arad_7518 [Agrobacterium radiobacter K84]
gi|221725908|gb|ACM28997.1| amidase family protein [Agrobacterium radiobacter K84]
Length = 456
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLF I G T G AR + AS + +V L E G +G+ + EFA
Sbjct: 72 LDGIPIAWKDLFAIRGLPTTAGSTVLAR-EAPASEDADIVQALAEAGMVSVGRVNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY T NP + ++PGGSSSG+AVAVAA LV S+G DT G VR+PSAF
Sbjct: 131 FSGLGLNPHYGTSLNPLSKDVERVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G++ S G S G+ P++TSLD++G R
Sbjct: 191 GLVGYKASRGRYSMAGVFPLATSLDSLGPLCR 222
>gi|301384870|ref|ZP_07233288.1| hypothetical protein PsyrptM_19645 [Pseudomonas syringae pv. tomato
Max13]
gi|302062330|ref|ZP_07253871.1| hypothetical protein PsyrptK_20261 [Pseudomonas syringae pv. tomato
K40]
Length = 457
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 173/390 (44%), Gaps = 56/390 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGATCIGKTVVDE 115
P G+ A DLFD+ G VT G R + S A + V L G +GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAG--ATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSE 129
Query: 116 FAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FAYS G N H+ TP NP + ++PGGSSSG+AVAVAA +V ++G DT G +R+P+A
Sbjct: 130 FAYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAA 189
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
F G++GFR + S G+ P++ +LD+VG RS R
Sbjct: 190 FNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT---------------------RSVRDA 228
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
++ DD P ++ + L R VL+ E + + + G L
Sbjct: 229 LVIDDLLCARSKPTS-LLPRSLAGQRFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 287
Query: 294 ---------KNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIGEMLEISET 337
+ +++IQ++ + H ++S LDP + + + +
Sbjct: 288 IEMGHCQAFQATLQVIQQHGWLGATEAFALHQSLLDSDAASQLDPRVRKRLEAARHMPAS 347
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEM-----LSEDYQNR 388
++ N + R ++ + +L D +L+TP+ A+ PP P L +E+ L+
Sbjct: 348 LLVNLYAARERLQEQL-TLELDGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRLTM 406
Query: 389 AFSLLSIASV---SGCCQVTVPLGYYDKCP 415
SLL++ V SGC +P G P
Sbjct: 407 PGSLLNMPGVSLPSGCDASGLPTGLLLSAP 436
>gi|420249771|ref|ZP_14753009.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398063480|gb|EJL55210.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 473
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 180/413 (43%), Gaps = 29/413 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL + DL D G T +G A + + VV LV+ GA IGKT EFA
Sbjct: 79 LEGLPIGIKDLIDTNGIETRYGSA--AYVGHVPTVDADVVKALVDQGAIIIGKTTTHEFA 136
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ ++ + + NP +++PGGSS GAAVA+A+ V +G DT G VR+P+A CG+
Sbjct: 137 WGVSTASAKFGDTLNPLDSTRIPGGSSGGAAVAIASGAVRAGVGTDTGGSVRIPAALCGV 196
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL-LQLPFA-AQRSPRQIII 235
+GF+P++G +S G+ P++ + D VG + + + LP + A S R ++
Sbjct: 197 VGFKPTHGTISTRGVFPLAPTCDHVGLLGEQVDDIGILADAFGIDLPESDAWISARLGVV 256
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
+ L I+ E++F + L FD+ S G +++
Sbjct: 257 REIPPVPLSPEMAAAFDGAIERLEQVFACDEVDTSRL---FDTVYESFASIVLIEGGIEH 313
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
R ++ E +E ++ A D+ A I + + R E + +
Sbjct: 314 FQRSDWDRIARHYSPETVERLRRAEAMDLRAYI------------SAQQSRREFAARLHK 361
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----VSGCCQVTVPLGYY 411
+ LV PT P++ + D+ L + V+G +++PL
Sbjct: 362 AMSTVDYLVLPTCPCTAPRVDAGSVTIGDWSGTVREALMTYTAPFNVTGFPAISIPLPRG 421
Query: 412 D-KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKL-STNTFNQKQ 462
D + PT++ +A+ G D LL Q M LQ AT ++L NT +Q
Sbjct: 422 DSELPTALQIVAKPGDDGALLQIAQQMELMLQA----ATSTELIDVNTQGGRQ 470
>gi|297530427|ref|YP_003671702.1| amidase [Geobacillus sp. C56-T3]
gi|297253679|gb|ADI27125.1| Amidase [Geobacillus sp. C56-T3]
Length = 470
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 190/412 (46%), Gaps = 47/412 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFG---HPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL G+ A+ D+ + T G H + T+SA TV+ L E GA GKT +
Sbjct: 72 PLHGIPIAIKDILYVANETTTMGSKIHRNFRPTYSA-----TVIEKLTEAGAVFPGKTNL 126
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
E+A+ N H+ NP P ++PGGSS G+ VA AA + SLG DT G +R+PS+
Sbjct: 127 HEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRIPSS 186
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCGI+G +P+YG VS G P++ SLD +G A K R ++L + + P
Sbjct: 187 FCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMA---KTARDAAYILEAMAGYDPKDPTST 243
Query: 234 IIADDCFELLKIPADRVVQVVI---------KSTEKLFGRQVLKHENLGEYFDS-KVPSL 283
+ + + + V++ I + E+ + + E G ++ ++P+L
Sbjct: 244 NAPATSYSTQFMESVKGVKIGIEPYFFDHVDEGVERAVKQAIASLEREGAVVETVRIPTL 303
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISE--TVIE- 340
+ + E+ ++ +HN +E + D ++ +L++ E + ++
Sbjct: 304 Q--YAQYAEMITILSEASAI----HHNHLVER-----EEDFGDDVRFLLKLGELPSAVDY 352
Query: 341 -NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG-------GKEMLSEDYQNRAFSL 392
+ IR ++ + +L+TPT + PPK+G G+E+ ++ +
Sbjct: 353 LEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEV---NFLDHIIRF 409
Query: 393 LSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+++G VTVP G+ P + I G+ +L+ V +++ +L +
Sbjct: 410 TGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILN-VADVFETLHPE 460
>gi|315499521|ref|YP_004088324.1| amidohydrolase, atze family [Asticcacaulis excentricus CB 48]
gi|315417533|gb|ADU14173.1| amidohydrolase, AtzE family [Asticcacaulis excentricus CB 48]
Length = 440
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 162/377 (42%), Gaps = 34/377 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTH---SAASRTSTVVSTLVEGGATCIGKTVV 113
PL G+ FAV DLFD+ G VT G AR H AAS + VV L GA IG +
Sbjct: 63 PLAGVPFAVKDLFDVAGQVTTAG----ARLHLGAPAASEDAEVVRRLKAAGAILIGTLNM 118
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DEFAY N H+ T NP P+++ GGSS G+A AVAA V SLG DT G VRVP++
Sbjct: 119 DEFAYGFATVNAHFGTTQNPHDPARLAGGSSGGSAAAVAAGFVPLSLGSDTNGSVRVPAS 178
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
CG+ G RP+ GAV G+ P +LDTVG FAR + LR + VL P ++
Sbjct: 179 LCGVWGMRPAQGAVPLNGVFPFVEALDTVGPFARGSRDLRRLYEVLAGETLTGGSEPLRV 238
Query: 234 IIADDCFELLKIP-ADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
D F P A V V+ L + + ++ GF T
Sbjct: 239 ARLDGFFARNAAPEAVNAVDTVMT---------YLGSRAIADLPQAEAGRSAGFVMT-AA 288
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
L + H + + + DP + + + V++ R+ R
Sbjct: 289 LGGAL-----------HLDTLRARAQDYDPAVRDRLIAGAMLPAAVLDKALRYRDHYRRI 337
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI----ASVSGCCQVTVPL 408
L +L+ P T P P + +L + A + L I S++G + PL
Sbjct: 338 FYQLFDQFDVLIAPATPCPAPLIEAGTILIDGKPAPARAHLGIYAQAISLAGVPVIAAPL 397
Query: 409 GYYDKCPTSVSFIARHG 425
+ P + I R G
Sbjct: 398 KTH-GLPIGLQIIMRPG 413
>gi|190895565|ref|YP_001985857.1| hypothetical protein RHECIAT_PA0000250 [Rhizobium etli CIAT 652]
gi|190699510|gb|ACE93594.1| probable glutamyl-tRNA amidotransferase protein, A subunit
[Rhizobium etli CIAT 652]
Length = 456
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDIEG T G A + A R + VV+ L G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGVTTTAGSRVLA-GDAPAERDAAVVALLKNAGMIAIGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSGA VAVAA LV ++G DT G VRVP+AF
Sbjct: 131 FSGLGINPHYGTPVNPQNSDRPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRVPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
GI+G++ + G + G+ P++ SLD++G R K
Sbjct: 191 GIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRTVK 225
>gi|169795798|ref|YP_001713591.1| amidase [Acinetobacter baumannii AYE]
gi|213157510|ref|YP_002319555.1| Glu-tRNA amidotransferase [Acinetobacter baumannii AB0057]
gi|215483284|ref|YP_002325491.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB307-0294]
gi|301346133|ref|ZP_07226874.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB056]
gi|301511349|ref|ZP_07236586.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB058]
gi|301597072|ref|ZP_07242080.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB059]
gi|332855507|ref|ZP_08435913.1| Amidase [Acinetobacter baumannii 6013150]
gi|332870331|ref|ZP_08439166.1| Amidase [Acinetobacter baumannii 6013113]
gi|417574089|ref|ZP_12224943.1| amidase [Acinetobacter baumannii Canada BC-5]
gi|421620457|ref|ZP_16061393.1| amidase [Acinetobacter baumannii OIFC074]
gi|421643750|ref|ZP_16084242.1| amidase [Acinetobacter baumannii IS-235]
gi|421649405|ref|ZP_16089799.1| amidase [Acinetobacter baumannii IS-251]
gi|421660217|ref|ZP_16100419.1| amidase [Acinetobacter baumannii Naval-83]
gi|421699438|ref|ZP_16138965.1| amidase [Acinetobacter baumannii IS-58]
gi|421796500|ref|ZP_16232562.1| amidase [Acinetobacter baumannii Naval-21]
gi|421801573|ref|ZP_16237531.1| amidase [Acinetobacter baumannii Canada BC1]
gi|169148725|emb|CAM86591.1| putative Amidase [Acinetobacter baumannii AYE]
gi|213056670|gb|ACJ41572.1| Glu-tRNA amidotransferase [Acinetobacter baumannii AB0057]
gi|213988289|gb|ACJ58588.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB307-0294]
gi|332727410|gb|EGJ58841.1| Amidase [Acinetobacter baumannii 6013150]
gi|332732316|gb|EGJ63578.1| Amidase [Acinetobacter baumannii 6013113]
gi|400209657|gb|EJO40627.1| amidase [Acinetobacter baumannii Canada BC-5]
gi|404571619|gb|EKA76676.1| amidase [Acinetobacter baumannii IS-58]
gi|408507411|gb|EKK09106.1| amidase [Acinetobacter baumannii IS-235]
gi|408513677|gb|EKK15293.1| amidase [Acinetobacter baumannii IS-251]
gi|408700411|gb|EKL45863.1| amidase [Acinetobacter baumannii OIFC074]
gi|408705495|gb|EKL50832.1| amidase [Acinetobacter baumannii Naval-83]
gi|410399029|gb|EKP51230.1| amidase [Acinetobacter baumannii Naval-21]
gi|410405154|gb|EKP57202.1| amidase [Acinetobacter baumannii Canada BC1]
Length = 369
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS GI P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGIYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLNVKADEVVWNCI--------YQALQKANL-ETVLQKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTEELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|399018226|ref|ZP_10720410.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398101862|gb|EJL92062.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 447
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD++G VT G + AA+ + V+ L GA +G+T +
Sbjct: 65 PSLLAGLPVSIKDLFDVQGEVTAAGS-KALANAPAATADAPAVARLRHAGAILLGRTNMS 123
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP NP ++ GGS+SG AV VA D+ +LG DT G +R+PSAF
Sbjct: 124 EFAFSGLGLNPHYGTPRNPFDEQRVSGGSTSGGAVTVALDMAVAALGTDTGGSIRIPSAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG+ GF+P+ VS G +P+ST+LD+ G +R
Sbjct: 184 CGLTGFKPTARRVSLQGAVPLSTTLDSAGPLSR 216
>gi|91788558|ref|YP_549510.1| amidase [Polaromonas sp. JS666]
gi|91697783|gb|ABE44612.1| Amidase [Polaromonas sp. JS666]
Length = 457
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ ++ DLFD+ G T G A AA V+ L GA G+T + EF
Sbjct: 76 PLAGIPVSIKDLFDVAGQTTAAGSTVLANARPAA-EDCPAVARLRAAGAVIAGRTNMVEF 134
Query: 117 AYSINGTNKHYDTPTNPA--APSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+S G N HY TP NPA A ++PGGSSSGAAV+VA LG DT G +R+P+A
Sbjct: 135 AFSGVGINPHYGTPVNPADTATERIPGGSSSGAAVSVATGAAMVGLGSDTGGSIRIPAAL 194
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CGI+GF+ + V G +P+STSLDTV R
Sbjct: 195 CGIVGFKSTARLVPTSGAVPLSTSLDTVCALTR 227
>gi|422299795|ref|ZP_16387346.1| amidase [Pseudomonas avellanae BPIC 631]
gi|407988199|gb|EKG30806.1| amidase [Pseudomonas avellanae BPIC 631]
Length = 457
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 157/347 (45%), Gaps = 49/347 (14%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGAT 106
QPL P G+ A DLFD+ G VT G R + S A + V L G
Sbjct: 68 QPL-----SPFDGVPVAWKDLFDVAGCVTTAG--ATVRNNLSPALLDAPSVGLLARAGMV 120
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDT 164
+GKT + EFAYS G N H+ TP NP + S ++PGGSSSG+AVAVAA +V ++G DT
Sbjct: 121 SLGKTNLSEFAYSGLGLNPHFGTPINPKSDSSPRIPGGSSSGSAVAVAAGIVPIAMGTDT 180
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G +R+P+AF G++GFR + S G+ P++ +LD+VG
Sbjct: 181 AGSIRIPAAFNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------ 222
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
RS R ++ DD P ++ + L R VL+ E + +
Sbjct: 223 ---RSVRDALVIDDLLCARSKPTS-LLPRSLAGQRFLVDRAVLEDERVAPAVRDNLLRAV 278
Query: 285 GFHKTNGEL---------KNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEI 328
+ G L + +++IQ++ + H ++S LDP + +
Sbjct: 279 EALRAGGALIEMGHCQAFQATLQVIQQHGWLGAAEAFALHQSLLDSDAASQLDPRVRKRL 338
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL 375
+ +++ N + R ++ + +L D +L+TP+ A+ P L
Sbjct: 339 EAARHMPASLLVNLYAARERLQEQL-TLELDGALLITPSVAHVAPPL 384
>gi|417549156|ref|ZP_12200236.1| amidase [Acinetobacter baumannii Naval-18]
gi|417565340|ref|ZP_12216214.1| amidase [Acinetobacter baumannii OIFC143]
gi|421676025|ref|ZP_16115943.1| amidase [Acinetobacter baumannii OIFC065]
gi|421693108|ref|ZP_16132753.1| amidase [Acinetobacter baumannii IS-116]
gi|395557096|gb|EJG23097.1| amidase [Acinetobacter baumannii OIFC143]
gi|400387124|gb|EJP50197.1| amidase [Acinetobacter baumannii Naval-18]
gi|404558794|gb|EKA64071.1| amidase [Acinetobacter baumannii IS-116]
gi|410380985|gb|EKP33560.1| amidase [Acinetobacter baumannii OIFC065]
Length = 369
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 181/392 (46%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLNVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ ++T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAQTTLEQVKQAEVVKAQLTEELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|187479140|ref|YP_787165.1| amidase [Bordetella avium 197N]
gi|115423727|emb|CAJ50277.1| putative amidase [Bordetella avium 197N]
Length = 442
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 32/397 (8%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD++G V+ G + A + + VV+ L + GA +G+T +
Sbjct: 65 PSALAGLPISIKDLFDVQGQVSTAGS-RALDGAAPAVQDAPVVARLRQAGAILLGRTNMS 123
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP P +++ GGS+SG AV VA + +LG DT G +R+PSAF
Sbjct: 124 EFAFSGLGLNPHYGTPRAPHDENRIAGGSTSGGAVTVARGMAVAALGTDTGGSIRIPSAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD-------PKILRHVGHVLLQLPFAAQ 227
CG+ GF+P+ V G +P+S+SLD++G A I+R G + P AA
Sbjct: 184 CGLTGFKPTASRVPRTGAVPLSSSLDSIGPLAASVGCCATFDAIIR--GRLDGSAPEAAS 241
Query: 228 -RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+ R I D F+ + ++ Q +++ + +H + FD P L+
Sbjct: 242 LKGLRLYITRDFVFDNIDPEVEQAFQTYVQN--------LARHGAILVPFD--FPELREL 291
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
N + E H + S DP ++ I IS + ++ R
Sbjct: 292 PDINAAGG-----LTAAEAWAWHRRLLASEGDRYDPRVAVRIRRGAAISAADYLDVQAAR 346
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED-YQNRAFSLLSIASVS--GCCQ 403
+++ L+D + PT A PP L E + + L + ++++ C
Sbjct: 347 ARIQAIARHRLRDADGWLMPTVAVQPPLLAPLERDDDTFFATNGLVLRNPSTINFLDGCA 406
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
+++P D+ +S HG D +L + A+
Sbjct: 407 LSLP---TDQAGIGLSVCGLHGQDARVLSVAAALEAT 440
>gi|332797954|ref|YP_004459454.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acidianus
hospitalis W1]
gi|332695689|gb|AEE95156.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Acidianus
hospitalis W1]
Length = 393
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 173/392 (44%), Gaps = 42/392 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+F + D+ +G T G +R + +V ++E G T +GKT EFA
Sbjct: 27 LKGLTFGIKDIILTKGIKTTAGSK--ILKDYIPNRNAWIVDKILEEGGTIVGKTNTHEFA 84
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
T+ NP P ++ GGSS G+AVAVA +VD +G DT G +R+P++ CG+
Sbjct: 85 IGATNTSSIAGPARNPYDPERISGGSSGGSAVAVALKMVDVGVGTDTGGSIRIPASLCGV 144
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV---------GHVLLQLPFAAQR 228
+GF+P+ G + G+IP S +LDT+G+ RD LR V HVL+ +
Sbjct: 145 IGFKPTTGIIPIDGVIPFSWTLDTIGFITRDIPTLRRVLDAVIPIENKHVLVS---KVRT 201
Query: 229 SPR--QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
PR + DD PA ++ ++ F + D ++ L+GF
Sbjct: 202 RPRLGVFLFKDD-------PASNSLKSILNKLSSYF-----------DLIDLRLNFLEGF 243
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET-VIENCKSI 345
NV I E + H +WIES PD+ + + L+I I+ ++
Sbjct: 244 G------SNVRGTIALAEGSSYHRDWIESTPGMYFPDVKELLMQGLQIRAIDYIDALRAR 297
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
R + + D I ++PTT P PK+ ++Y+ S + ++ ++
Sbjct: 298 RVIFEEYVRAFDSVDAI-ISPTTKIPAPKISEVVGREKEYRKLLVSNTELFNLVNAPSIS 356
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+P+ + P + D +LD + +
Sbjct: 357 LPVSKVNDLPIGLMVSGLPYEDGIILDIAEKI 388
>gi|424779211|ref|ZP_18206142.1| amidase [Alcaligenes sp. HPC1271]
gi|422885936|gb|EKU28369.1| amidase [Alcaligenes sp. HPC1271]
Length = 388
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 180/381 (47%), Gaps = 40/381 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL GLSF V D+ D++G T +G A +A A R + V+ L + GA +GKTV
Sbjct: 35 PLAGLSFGVKDVLDVQGMPTCYG----AHFPNALPAERDAACVALLRQAGAIALGKTVTA 90
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFAY+ G + NP PGGSSSG+A AVAA +VDF+LG T G + P+AF
Sbjct: 91 EFAYAAPGPTR------NPLNLEHTPGGSSSGSAAAVAAGMVDFALGTQTGGSMMRPAAF 144
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
GILGF+PS+GAV G+ + SLDT+G+F+RD +LR V VL LP + + +I
Sbjct: 145 TGILGFKPSFGAVHRSGLFLLCDSLDTIGYFSRDLSVLRRVATVLQGLPDSRVPTAPRIG 204
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+ D PA + + + E L E G + + ++P+ + +LK
Sbjct: 205 VLDGKDLGPITPA--ALAALEQGCEHL--------EQQGAHLE-RLPA-------DPQLK 246
Query: 295 NVMRL---IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
++ L I YE + ++ AL P I + LE+ ++ R ++++
Sbjct: 247 ELLILQGQIMAYEMARSLLPVWQASPDALRPITVQAIKQGLELPAADYHAWQARRRQLQT 306
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
L+TP P P G + NR +SLL ++S + P G
Sbjct: 307 EWQERYGHFDALLTPAAPGPAPY--GLDSTGSSILNRPWSLLGWPTLS----LPAP-GQN 359
Query: 412 DKCPTSVSFIARHGGDRFLLD 432
P + I + D LLD
Sbjct: 360 SPLPLGLQLIGQPHQDAALLD 380
>gi|334116530|ref|ZP_08490622.1| allophanate hydrolase [Microcoleus vaginatus FGP-2]
gi|333461350|gb|EGK89955.1| allophanate hydrolase [Microcoleus vaginatus FGP-2]
Length = 604
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FA+ D D G T G P +A T +R+S VV L GA IGKT +D+F
Sbjct: 71 PLYGIPFAIKDNLDWAGVPTTAGCPPFAST---PARSSAVVERLCAAGAIAIGKTNMDQF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + GT Y NP +PGGSSSG+A AV+A LV F+LG DT G RVP+AF
Sbjct: 128 ATGLVGTRTPYGVCRNPFDSRYIPGGSSSGSATAVSAGLVSFALGTDTAGSGRVPAAFTN 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G++ G++P SLD V FA
Sbjct: 188 IVGLKPSCGSIGTRGLLPAVRSLDCVSVFA 217
>gi|424868760|ref|ZP_18292495.1| Glutamyl-tRNA(Gln) amidotransferase A subunit / Amidase
[Leptospirillum sp. Group II 'C75']
gi|124514995|gb|EAY56506.1| Glutamyl-tRNA(Gln) amidotransferase A subunit / Amidase
[Leptospirillum rubarum]
gi|387221096|gb|EIJ75691.1| Glutamyl-tRNA(Gln) amidotransferase A subunit / Amidase
[Leptospirillum sp. Group II 'C75']
Length = 492
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 107/211 (50%), Gaps = 9/211 (4%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G A+ D + T A +TVV L+E GA +GKT +
Sbjct: 66 APSPFYGYPVAIKDNLHVRDLPTTCASRMLANFRPV--ENATVVDRLLEAGAIVLGKTNM 123
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DEFA + N NP ++PGGSS G+AVAVAAD+ +LG DT G +R P+A
Sbjct: 124 DEFAMGSSTENSAMGVTRNPWDLRRVPGGSSGGSAVAVAADMAPMALGSDTGGSIRQPAA 183
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCG+LG +P+YG +S G++ S+SLD +G FA RH L + + R +
Sbjct: 184 FCGVLGLKPTYGRISRYGLVAFSSSLDQIGPFA------RHAEDALEMMLLLSGPDGRDM 237
Query: 234 II-ADDCFELLKIPADRVVQVVIKSTEKLFG 263
+ + D E+ + A +V VI E+ FG
Sbjct: 238 TVESRDPSEMARDFAGKVQGTVIGMPEEFFG 268
>gi|260754343|ref|ZP_05866691.1| amidase [Brucella abortus bv. 6 str. 870]
gi|260883368|ref|ZP_05894982.1| amidase [Brucella abortus bv. 9 str. C68]
gi|297247954|ref|ZP_06931672.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Brucella abortus bv. 5 str. B3196]
gi|260674451|gb|EEX61272.1| amidase [Brucella abortus bv. 6 str. 870]
gi|260872896|gb|EEX79965.1| amidase [Brucella abortus bv. 9 str. C68]
gi|297175123|gb|EFH34470.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Brucella abortus bv. 5 str. B3196]
Length = 438
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 172/389 (44%), Gaps = 35/389 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G ++ DLFD+ G T G H A A + +V L GA IGKT +
Sbjct: 45 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 101
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA++ G N HY P N P+ +PGGSSSGAAV+VA + ++G DT G VR+P+A
Sbjct: 102 EFAFTPVGLNPHYGEPGNAIDPALIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 161
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+P+ + G P++ SLD+VG + R V +L A P
Sbjct: 162 NGLVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILADAVMAGEKPILPE 215
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ + +P D ++ + F + E G D V L G L
Sbjct: 216 VLPVNGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 269
Query: 294 KNVMRL--IQRYEFKNNH-NEWIESVKPALDPDI----SAEIGEMLEISETVIENCKSIR 346
K R+ I E + H + W+ + +D + S I LE ++E K++
Sbjct: 270 KEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAYHALMETRKALA 329
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCC 402
EM +S + TP T P + E+Y +R +LL +A+ C
Sbjct: 330 REMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVENLLLRDTQVANQFDLC 384
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ K PT + AR+ D+ LL
Sbjct: 385 SITLPMPGM-KLPTGLMLTARNDSDKRLL 412
>gi|384431978|ref|YP_005641338.1| amidase [Thermus thermophilus SG0.5JP17-16]
gi|333967446|gb|AEG34211.1| Amidase [Thermus thermophilus SG0.5JP17-16]
Length = 434
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 165/385 (42%), Gaps = 43/385 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH-------PEWARTHSAASRTSTVVSTLVEGGATCIG 109
PL GL + DLF ++G T G PE AR V L E GA
Sbjct: 64 PLHGLPLTIKDLFPVKGMPTRAGTKAPLPPLPEEARA----------VRRLREAGALLFA 113
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KT + E A I G N N PS+ GGSS G+AVAVA + SLG DT G +R
Sbjct: 114 KTNMHEIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIR 173
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQ 227
+P+ F G++GF+PSYG +S G +P+S S D G R + + +L +P A
Sbjct: 174 IPAGFNGVVGFKPSYGRISLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGESIPLEAV 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGF 286
++P + +P D + + K F R + L E + +P L+G
Sbjct: 234 QNP-----------VFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-LRGV 281
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
++ RL+ RYE H + ++ P + + L ++E + + R
Sbjct: 282 YEV------YTRLV-RYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDAVAER 334
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ---NRAFSLLSIA-SVSGCC 402
+R ++ L+ L+ P P P LG +E+ E + AF L++ S+ G
Sbjct: 335 EVLRLELAKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVP 394
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGD 427
+ +P + P + + +G D
Sbjct: 395 TLALPFAKVEGMPVGLQVVGAYGED 419
>gi|298290657|ref|YP_003692596.1| amidohydrolase, AtzE family [Starkeya novella DSM 506]
gi|296927168|gb|ADH87977.1| amidohydrolase, AtzE family [Starkeya novella DSM 506]
Length = 469
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 159/384 (41%), Gaps = 37/384 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFD++G T G + R A+R +T+V L GA C+G + E+
Sbjct: 77 PLAGVPFAVKNLFDLKGLPTLAGS-KINRDRPPAARDATLVERLSAAGAVCLGGLSMGEY 135
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP P M GGSS G+ AV LV FSLG DT G +RVPS+FCG
Sbjct: 136 AYDFTGENLHDGRSANPHDPEHMTGGSSGGSGAAVGGKLVPFSLGSDTNGSIRVPSSFCG 195
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG +S P SLD +G FA RHVG + P A
Sbjct: 196 IFGLKPTYGRLSRARSFPFVASLDHLGPFA------RHVGDLAATYDALVGLDPDDPAQA 249
Query: 237 D----DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG- 291
D L P D V V+ F RQ + +++ + K T
Sbjct: 250 DRPAAPTLPTLDAPGDLRVAVL----GGWFARQ-----GTPQAYEAVARAAKALGATRTV 300
Query: 292 ELKNVMR------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+L V R +I E H E + DP + + + ++ +
Sbjct: 301 DLPEVERARAAAYIITMAEGAALHMERLRQRPGDFDPAVRERLLAGAVLPGAWVQRAQIF 360
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPK-------LGGKEMLSEDYQNRAFSLLSIASV 398
R R L + +L+ P T P P+ L G+EML N I S
Sbjct: 361 RRWFRERALELFAEWDVLIAPATPVPAPRGGQKTFVLDGREMLVR--PNIGIYTQPI-SF 417
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIA 422
G P+ ++ P +V IA
Sbjct: 418 IGLPVAAAPIPTGERLPIAVQLIA 441
>gi|163842852|ref|YP_001627256.1| amidase [Brucella suis ATCC 23445]
gi|163673575|gb|ABY37686.1| Indoleacetamide hydrolase [Brucella suis ATCC 23445]
Length = 445
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 172/389 (44%), Gaps = 35/389 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G ++ DLFD+ G T G H A A + +V L GA IGKT +
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 108
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P A
Sbjct: 109 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPVAL 168
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+P+ + G P++ SLD+VG + R V +L A P
Sbjct: 169 NGLVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILADAVMAGEKPILPE 222
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ + +P D ++ + F + E G D V L G L
Sbjct: 223 VLPVNGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 276
Query: 294 KNVMRL--IQRYEFKNNH-NEWIESVKPALDPDI----SAEIGEMLEISETVIENCKSIR 346
K R+ I E + H + W+ + +D + S I LE ++E K++
Sbjct: 277 KEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAYHALMETRKALA 336
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCC 402
EM +S + TP T P + E+Y +R +LL +A+ C
Sbjct: 337 REMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVENLLLRDTQVANQFDLC 391
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ K PT + AR+ D+ LL
Sbjct: 392 SITLPMPGM-KLPTGLMLTARNDSDKRLL 419
>gi|399040291|ref|ZP_10735692.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF122]
gi|398061661|gb|EJL53449.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF122]
Length = 453
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 94/152 (61%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDI+G T G A + AA + VV+TL + G IG T + EFA
Sbjct: 72 LDGIPIAWKDLFDIKGRTTTAGSTVLA-SGPAAQADAPVVATLKQAGMVSIGCTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HYDTP NP + ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGLNPHYDTPHNPRSSDVPRVPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G G+ P++ SLD++G R
Sbjct: 191 GIVGYKATRGRYPMAGVYPLAKSLDSLGPLCR 222
>gi|172063473|ref|YP_001811124.1| amidase [Burkholderia ambifaria MC40-6]
gi|171995990|gb|ACB66908.1| Amidase [Burkholderia ambifaria MC40-6]
Length = 446
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 159/392 (40%), Gaps = 17/392 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G V FD EG+VT G A A + +VS L GA + +T + EF
Sbjct: 65 PLAGAVLTVKACFDCEGWVTHAGSRVLA-DEPPARTDAAMVSMLRRAGAVLVAQTAMTEF 123
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY G N+ Y TPT P A ++ GGSSSGAAV+VA D SLG DT G R+P+AF
Sbjct: 124 AYGALGVNRAYGTPTTPLDARRERVAGGSSSGAAVSVALGAADLSLGSDTSGSARIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ GF+PS G + G+ +STS D G A ++ R V L +R P
Sbjct: 184 CGVTGFKPSRGRYASDGMQYLSTSFDVPGLLAATVELCRQA-DVALHGRDVRRRRP--AT 240
Query: 235 IADDCFELLK-IPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
I D F + + D V VV + + R + V + G +
Sbjct: 241 IRDLQFVVPEPFATDDVDPVVAHAFDAWLSRLSAHGARIRRKRLDCVAEAGAVARAGGII 300
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
++ R + + DP + A I ++ +
Sbjct: 301 AAEAFMLHRARLATAADRY--------DPLVGARIAAGEQVRAHDYAAALLRLAALADTY 352
Query: 354 SSLLKDDGILVTPTTAYPPPKLG--GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ L D ++TPT PP++ E + RAF L A+ ++VP
Sbjct: 353 HAELGDADAVLTPTVPRLPPRVADLADEAAYLEQNARAFRLTEFANRLDLPSISVPGDLR 412
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
++ P + R D LLD + +L +
Sbjct: 413 NRQPVGLLITGRRHEDARLLDVATMVERALTD 444
>gi|335036808|ref|ZP_08530127.1| hypothetical protein AGRO_4135 [Agrobacterium sp. ATCC 31749]
gi|333791789|gb|EGL63167.1| hypothetical protein AGRO_4135 [Agrobacterium sp. ATCC 31749]
Length = 453
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 93/148 (62%), Gaps = 3/148 (2%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG T G + + ASR + VV+ L + G IG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGMPTTAGS-KILSDDAPASRDADVVAALKQAGMVSIGRTNMSEFA 128
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSGA V VAA LV ++G DT G VR+P+AF
Sbjct: 129 FSGLGINPHYGTPRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVG 203
G++G++ S G S G+ P++ SLD++G
Sbjct: 189 GVVGYKASRGRYSMHGVYPLAKSLDSLG 216
>gi|134100032|ref|YP_001105693.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
gi|291002978|ref|ZP_06560951.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
gi|133912655|emb|CAM02768.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
Length = 445
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 171/385 (44%), Gaps = 36/385 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D+ + G T G +A S A + V L GGA +GKT EF
Sbjct: 79 PLHGIPVAVKDIIETAGMRTTMGSAHFADHVSTAD--AECVRRLRAGGAVIVGKTTTHEF 136
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G NP P+ M GGSS G+A AVAA +V ++G DT G VR+P+A CG
Sbjct: 137 AYGPTGDRAAGGASRNPHDPAAMSGGSSGGSAAAVAAGMVPLAVGTDTGGSVRIPAALCG 196
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS---PRQI 233
+ GF+P+YGAV G+ P+S SLD VG AR P+ R VL L RS P +
Sbjct: 197 VAGFKPAYGAVPADGVFPLSRSLDHVGVIARTPRDCRTAYRVLAGLRAGPPRSAGGPATV 256
Query: 234 --IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT-N 290
I FE DR V+ + ++ L GR V + E LG+ G +T N
Sbjct: 257 GWIAPGALFE-----TDREVEELARAA--LSGRAVQEVE-LGDA--------AGLRQTYN 300
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
G IQ E H E + P++ + R R
Sbjct: 301 G--------IQDAEAYAVHAERVADAPELFTPEVLERLQAAARTPGWRHVRAFEERQRWR 352
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRA-FSLLSIAS---VSGCCQVTV 406
+ ++ LL +L PTT + P +G +E+ + + LLS+ S ++G +TV
Sbjct: 353 AEVARLLSHHDLLALPTTPFAAPAVGQREIEVNGREVEVRWGLLSLTSPWNIAGVPALTV 412
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLL 431
P+G P + + R G + L
Sbjct: 413 PVGTSRGLPVGLQLVCRPGDEDLLF 437
>gi|429220977|ref|YP_007182621.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Deinococcus peraridilitoris DSM 19664]
gi|429131840|gb|AFZ68855.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Deinococcus peraridilitoris DSM 19664]
Length = 484
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 29 NIKQDFGAFIEKLQLLPPPQPLPPK-----APHPLTGLSFAVSDLFDIEGYVTGFGHPEW 83
+++ GA I ++ P L K PL G+ V D +++G T G
Sbjct: 31 SLQAHLGALISTVEGAPEQAQLVAKRLRAGVSLPLAGVPVVVKDNLNVKGTRTTCGSRAL 90
Query: 84 ARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGS 143
HS T+T V L+E GA +GK +DEFA + N + NP +++PGGS
Sbjct: 91 ENYHS--PYTATAVQRLIEAGAVVVGKANMDEFAMGSSSENSAFGVVRNPWDHTRVPGGS 148
Query: 144 SSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 203
S G+AVAVAA +V +LG DT G VR P+AF G+ GF+P+YG VS G++ ++SLD +G
Sbjct: 149 SGGSAVAVAAGMVPVALGSDTGGSVRQPAAFNGVYGFKPTYGRVSRYGLVAYASSLDQIG 208
Query: 204 WFARDPKIL 212
FAR + L
Sbjct: 209 PFARSAEDL 217
>gi|398835571|ref|ZP_10592932.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
gi|398216147|gb|EJN02703.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
Length = 459
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 177/398 (44%), Gaps = 44/398 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A DLFD +G T G W R A + +V+ G CIGKT + EF
Sbjct: 70 PLDGVPIAWKDLFDAQGTPTTAGSALW-RNAPPAFADAQLVARAARAGLVCIGKTNLSEF 128
Query: 117 AYSINGTNKHYDTPTNPAAP--SQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+S G N HY TP N P +++PGGSSSG+A+AVA +V ++G DT G +RVP+A
Sbjct: 129 AFSGLGINAHYGTPVNTLHPGAARVPGGSSSGSALAVALGIVPLAMGTDTAGSIRVPAAL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+ S + G+ +S +LD +G ARD V L P SP ++
Sbjct: 189 NGVVGFKSSSARYAFGGVTGLSETLDCLGPIARD------VADCLALDPVLRGMSPVDVL 242
Query: 235 I---ADDCFELLKI--PAD-----RVVQVVIKSTEKLFGRQVLKHENLGEYFDSK----V 280
D E ++I P D RV V ++TE R + + G D++ V
Sbjct: 243 AVAPGDGALEGIRIRAPRDVLDDARVTPGVRRNTE----RALDALQRAGAIVDARPLQAV 298
Query: 281 PSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIE 340
S T G L + ++RY N + ++ + I A + L+ +
Sbjct: 299 SSTFELIATRGWL-GALEALERYR---NLLQTSDAAR------IDARVRTRLQAANGFPP 348
Query: 341 NCKSIRNEMRSAISSLLKDD---GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS 397
+ R + + LKD+ LV P+ A+ P L E E + + + L +
Sbjct: 349 ERHAELMAQRWQLMAALKDELAGAALVMPSVAHEAPLLAQVESSPEAFADTNLATLRLTM 408
Query: 398 VSGCCQVT---VPLGY-YDKCPTSVSFIARHGGDRFLL 431
+ +T +P+ D PT + G D+ LL
Sbjct: 409 LGSFLDLTALSLPISSDGDTLPTGLQLALPCGQDQALL 446
>gi|227818637|ref|YP_002822608.1| allophanate hydrolase [Sinorhizobium fredii NGR234]
gi|36958892|gb|AAQ87317.1| Allophanate hydrolase [Sinorhizobium fredii NGR234]
gi|227337636|gb|ACP21855.1| predicted amidase [Sinorhizobium fredii NGR234]
Length = 601
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P++A A R +TVV L E GA +GKT +D+F
Sbjct: 67 PLWGIPFAVKDNIDVAGMPTTAACPDYAYL---AERDATVVRLLREAGALVVGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P+ +PGGSSSG+AVA A +V F+LG DT G R+P+
Sbjct: 124 ATGLVGVRTPYPAPRNAIDPALVPGGSSSGSAVATAHGIVSFALGTDTAGSGRIPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS GA+S G++P +LD V FA
Sbjct: 184 IVGLKPSIGALSTTGVVPACRTLDCVSIFA 213
>gi|83951505|ref|ZP_00960237.1| amidase [Roseovarius nubinhibens ISM]
gi|83836511|gb|EAP75808.1| amidase [Roseovarius nubinhibens ISM]
Length = 434
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 180/414 (43%), Gaps = 57/414 (13%)
Query: 49 PLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
PL PL G ++ DLFD+ G+VT G + ++ A + V+ L GA +
Sbjct: 55 PLAGTLTGPLAGALVSIKDLFDVAGHVTRAGT-RFMAENAPAKEDAEAVARLRRAGAVIM 113
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
G T + E AYS G N HY TP N P +PGGSSSG AV+VA L D ++G DT G +
Sbjct: 114 GHTNMTELAYSGLGLNPHYGTPENARYPGAIPGGSSSGGAVSVAQGLCDIAIGTDTGGSL 173
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQR 228
R+P+AF GI+GF+P+ +VS G + +S SLD+VG AR V HV L
Sbjct: 174 RIPAAFNGIVGFKPTQASVSRRGCLALSRSLDSVGPMARS------VAHVRLG------- 220
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG-EYFDSKVPS----- 282
+E LK P K T R+ + EN G E + V +
Sbjct: 221 -----------YEALKQP--------TKCTPNALVREFVIPENFGMEDLEPAVATGFAAA 261
Query: 283 -----LKGFHKTNGELKNV--MRLIQRYEF-----KNNHNEWIESVKPALDPDISAEIGE 330
G + L ++ M+ + ++F + + + +S + DP +++ +
Sbjct: 262 VARIEAAGHKVSRASLASLEAMKSLAVWQFSAVECRGEYEDAYQSQRDLFDPRVASRMAR 321
Query: 331 MLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF 390
E S + R + A + L +L+ PT PP E E Y
Sbjct: 322 AEETSAVGYRQTLNQRAALIEAFEAELAGR-VLLMPTVPILPPSFAAMED-DESYGRVNL 379
Query: 391 SLL---SIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
L +IA+V C +++P + V IA HG D LLD + A L
Sbjct: 380 QALRNPTIANVMDGCAISLPYAHGGDW-IGVMMIAGHGRDTALLDLAEACEAVL 432
>gi|126728353|ref|ZP_01744169.1| amidase [Sagittula stellata E-37]
gi|126711318|gb|EBA10368.1| amidase [Sagittula stellata E-37]
Length = 604
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 102/179 (56%), Gaps = 8/179 (4%)
Query: 33 DFGAFI---EKLQLLPPPQPLPPKAP--HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTH 87
D G FI ++ +++ LPP P +PL G+ FAV D D+EG T P +A
Sbjct: 42 DPGIFIALRDRAEVVAEAMALPPFDPEAYPLWGVPFAVKDNIDVEGLPTTAACPAFAYEP 101
Query: 88 SAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGA 147
+ + VV+ L GA IGKT +D+FA + G Y P N P +PGGSSSG+
Sbjct: 102 A---EDAFVVARLRAAGALVIGKTNLDQFATGLVGMRSPYAVPFNAVDPEIVPGGSSSGS 158
Query: 148 AVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
AVAVA +V F+LG DT G RVP+A I+GF+PS G +S G++P +LDT+ F+
Sbjct: 159 AVAVAQGIVSFALGTDTAGSGRVPAALNNIVGFKPSLGLLSATGMVPACRTLDTISIFS 217
>gi|417546521|ref|ZP_12197607.1| amidase [Acinetobacter baumannii OIFC032]
gi|421666831|ref|ZP_16106915.1| amidase [Acinetobacter baumannii OIFC087]
gi|421672202|ref|ZP_16112164.1| amidase [Acinetobacter baumannii OIFC099]
gi|400384409|gb|EJP43087.1| amidase [Acinetobacter baumannii OIFC032]
gi|410380110|gb|EKP32701.1| amidase [Acinetobacter baumannii OIFC099]
gi|410386810|gb|EKP39276.1| amidase [Acinetobacter baumannii OIFC087]
Length = 369
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + V+ +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVIKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLNVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTKELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|421655592|ref|ZP_16095913.1| amidase [Acinetobacter baumannii Naval-72]
gi|408507897|gb|EKK09585.1| amidase [Acinetobacter baumannii Naval-72]
Length = 369
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + D VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLNVKTDEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ ++T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAQTTLEQVKQAEVVKAQLTEELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|398828196|ref|ZP_10586398.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
gi|398218914|gb|EJN05416.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
Length = 432
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 170/386 (44%), Gaps = 31/386 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DLFD+ G T G +T AAS + +V L GA IGKT++ EF
Sbjct: 56 PLDGRIVSIKDLFDVAGETTLAGSI-IRKTAEAASEDALMVQRLRAAGAVIIGKTLMTEF 114
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N H+ N ++ GGSS GA ++VA + S+G DT G +R+P+A G
Sbjct: 115 AFTAVGLNPHHPVAGNAVDSLRIAGGSSIGAGISVAEGTSEISIGSDTGGSIRIPAALNG 174
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ V G +P+S SLD+VG AR+ VL A PR +
Sbjct: 175 VVGFKPTAKRVPLQGALPLSPSLDSVGPLARNVSDCAFTDSVL------AGEHPRPL--- 225
Query: 237 DDCFEL--LKIPADRVVQVVIKST----EKLFGRQVLKHENLGEYF-DSKVPSLKGFHKT 289
D L L+I R V+ K+T EK F + E G D + L
Sbjct: 226 -DAISLSGLRIGVPR--GVLFKNTEPEVEKAFSSSLQAFEKAGAILADCSIDDLIAALAR 282
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
+ ++ + E H W+ +D + + LE+SE+ + R +
Sbjct: 283 ATSVGSIAGI----EASRIHAAWLRDDTLDVDQRVQRPLLRRLEVSESDYIDLMIKRQSL 338
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCCQVT 405
+ +K LV PT P + E E++ SLL +A+ ++
Sbjct: 339 VREMDKRIKAYDFLVLPTVPIVAPSIVAVE--DENFYRDTESLLLRNTQVANQFDLTAIS 396
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P+ P + +A+HG DR LL
Sbjct: 397 LPMPNL-VLPAGLMLMAQHGTDRRLL 421
>gi|421786754|ref|ZP_16223141.1| amidase [Acinetobacter baumannii Naval-82]
gi|410410859|gb|EKP62748.1| amidase [Acinetobacter baumannii Naval-82]
Length = 369
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 181/392 (46%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
+ V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 IKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKTMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + F+++H D +F +D +Q
Sbjct: 338 SEGLPVGLQFVSKHQKDEQLCVIAKFCVDAMQ 369
>gi|226355863|ref|YP_002785603.1| Amidase [Deinococcus deserti VCD115]
gi|226317853|gb|ACO45849.1| putative Amidase [Deinococcus deserti VCD115]
Length = 398
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 12/159 (7%)
Query: 55 PH-PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT--STVVSTLVEGGATCIGKT 111
PH PL+GL+F+V DLF + G+ P A T +A + S +V L+ GA+ GKT
Sbjct: 35 PHGPLSGLTFSVKDLFGVPGW------PLAASTRAAVADPGPSVLVQQLLALGASATGKT 88
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+ E A I G N + T ++P P ++PGGSS GAAV+VA + VDF+LG DT G +RVP
Sbjct: 89 HLHEIALGITGLNGYGGT-SHPFEPQRLPGGSSGGAAVSVALNQVDFALGTDTGGSIRVP 147
Query: 172 SAFCGILGFRPSYG--AVSHMGIIPISTSLDTVGWFARD 208
+A+CG++G++P+ G A S G++P+S + D G ARD
Sbjct: 148 AAWCGVVGYKPTKGHAAWSTEGVLPLSWTCDHAGPLARD 186
>gi|338975420|ref|ZP_08630773.1| putative amidase [Bradyrhizobiaceae bacterium SG-6C]
gi|338231490|gb|EGP06627.1| putative amidase [Bradyrhizobiaceae bacterium SG-6C]
Length = 432
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 182/395 (46%), Gaps = 26/395 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G + DLFD++G VT G A A + +V L E GA KT + EF
Sbjct: 54 PLDGAILTIKDLFDVKGDVTRAGSKVLASRGKPAEADAVIVQRLREAGAVIAAKTNMTEF 113
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS G N H+ TP NPA ++PGGSSSGAAVA A + ++G DT G R+P+AFCG
Sbjct: 114 AYSGLGANPHFGTPGNPADRKRVPGGSSSGAAVAAADAFCEIAIGTDTGGSTRIPAAFCG 173
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFAAQRSPRQIII 235
+ GF+P+ V G P+S +LD++G AR VL ++P + P +
Sbjct: 174 VTGFKPTVKRVPRTGAFPLSFTLDSIGPIARSVADCADADAVLAGEMP--SPLVPPSLKE 231
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
F + P D + +V K+ + + + H G D + +L H N
Sbjct: 232 VRAGF-VQGYPIDGLDDIVGKAYPQALAK-LASHWKSGA--DVTLKALDIMHTANERGG- 286
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR--SAI 353
+ E H + +DP++ A + +IS + ++R+ R + +
Sbjct: 287 ----VAPPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKISAA--DYILALRDRERGIAQM 340
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLS-EDYQNRAFSLL---SIASVSGCCQVTVPLG 409
++ +LV PT P + E+ + E + R L SI + C V++P+
Sbjct: 341 DAVFDQVDVLVMPTVQIVAPTM--DEISTPESFNKRNVQALMNTSIWNFFDVCAVSLPIR 398
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+ + P + + RHG DR LL M A++++Q
Sbjct: 399 FGNALPVGLMLVGRHGDDRRLL----AMAAAVEKQ 429
>gi|425469635|ref|ZP_18848554.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9701]
gi|389880465|emb|CCI38759.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9701]
Length = 443
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 119/209 (56%), Gaps = 8/209 (3%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDIEG VT G + R H AA + + + TL GA +G T +DE+
Sbjct: 67 PLAGVPFAVKNLFDIEGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEY 125
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG
Sbjct: 126 AYGFVTENAHYGATANPLDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCG 185
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQRSPRQ 232
++G +P++G VS G+ +SLD +G+F+ + + + V L+ P +
Sbjct: 186 VVGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWRVFAKNNLKAPLNGLEGVK- 244
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKL 261
I +ADD F+ P V++ V E+L
Sbjct: 245 IALADDYFQQGAEP--EVIEAVTAIAERL 271
>gi|383769955|ref|YP_005449018.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. S23321]
gi|381358076|dbj|BAL74906.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. S23321]
Length = 451
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 110/225 (48%), Gaps = 33/225 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL F+V D D+ G T PE+A A TS VV+ + GA +GKT +D+F
Sbjct: 66 PLYGLVFSVKDCIDVAGEQTTSACPEFAYV---AKDTSPVVADAIAAGAIYVGKTNMDQF 122
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y NP P +PGGSSSGAAV+VA F+ G DT G RVP+++CG
Sbjct: 123 ATGLVGVRSPYGIARNPHNPDYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASYCG 182
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+P+ GA S G++ S DT+ + + P + VL A+ P
Sbjct: 183 VTGFKPAPGAFSQRGMVYACRSFDTISLYTQQPDDAYDIYRVL------ARHDP------ 230
Query: 237 DDCF---------------ELLKIPADRVVQVVI---KSTEKLFG 263
+DCF LKI R+ Q+ TE+LFG
Sbjct: 231 EDCFSPVDFAGWTEQASPARPLKIATPRLDQLKFFGNVETERLFG 275
>gi|445488017|ref|ZP_21458065.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii AA-014]
gi|444767986|gb|ELW92215.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii AA-014]
Length = 369
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTHTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + F+++H D +F +D +Q
Sbjct: 338 SEGLPVGLQFVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|424919835|ref|ZP_18343198.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392848850|gb|EJB01372.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 456
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDIEG T G + A R + VV+ L + G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLATTAGSVVLG-ADAPAKRDAAVVALLRQAGMIAIGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G + G+ P++ SLD++G R
Sbjct: 191 GIVGYKATRGRHAMDGVYPLAKSLDSLGPLCR 222
>gi|398913724|ref|ZP_10656583.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398179809|gb|EJM67408.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 449
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 167/391 (42%), Gaps = 32/391 (8%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+ P L GL ++ DLFD++G VT G T A + VS L GA +G+T
Sbjct: 63 RVPSLLAGLPVSIKDLFDVKGQVTRAGS-ILLDTAMPAKADAIAVSRLRAAGAILLGRTN 121
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+ EFA+S G N HY TP APS++ GGSSSGAAV+V + LG DT G VR+PS
Sbjct: 122 MSEFAFSGLGLNPHYGTPRVRQAPSRVAGGSSSGAAVSVVEGMAVAGLGTDTGGSVRIPS 181
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQ---LPFA 225
AFCG+ GF+P+ V G P++ SLD++G A + + +L LQ LP A
Sbjct: 182 AFCGLTGFKPTASRVPLDGAFPLAQSLDSIGPLAHSVEDCWIIDGILAGTHLQTPALPLA 241
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD-SKVPSLK 284
L I D V++ + +T + F + V + G + P L
Sbjct: 242 GLN--------------LAITRDYVLEDIDDATARAFQKSVQRLTAAGAHVTWIDFPELY 287
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPAL-DPDISAEIGEMLEISETVIENCK 343
+ N E +H W+E + L DP ++ I +S
Sbjct: 288 QLPEINDAGG-----FTAAEAWYHHRYWLEGDRRHLYDPLVAYRIKRGKSLSAFDYLQLI 342
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGG-KEMLSEDYQNRAFSLL--SIASVSG 400
R ++ A L + PT A P++ +E + + L S+ +
Sbjct: 343 EWRQQLIGAAQQRLGHFHAWLMPTVAIVAPRISALQENTATFFSTNGLVLRNPSVVNFLD 402
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
C +++P P +S + H D +L
Sbjct: 403 GCALSLPCHAPGDLPVGLSVVGLHRRDAQVL 433
>gi|218439121|ref|YP_002377450.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7424]
gi|218171849|gb|ACK70582.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7424]
Length = 457
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 113/201 (56%), Gaps = 18/201 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDI G VT G + + +S A R +T +S L + GA +G +DE+
Sbjct: 70 PLAGVPFAVKNLFDIAGVVTLAGS-KINQDNSPAIREATALSRLKKAGAILVGALNMDEY 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP +++ GGSS G+A AVA DLV FSLG DT G +RVP+AFCG
Sbjct: 129 AYGFVTENSHYGATPNPLDITRISGGSSGGSAAAVAGDLVTFSLGSDTNGSIRVPAAFCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSPR- 231
+ GF+P+YG +S G S+SLD +G FAR + + + +L + P +R P
Sbjct: 189 LYGFKPTYGRLSRAGTFLFSSSLDHIGPFARSVRDIATIFDLLQGEDPRDPVCTKRPPHP 248
Query: 232 ------------QIIIADDCF 240
+I IADD F
Sbjct: 249 CLPELDAGIEGVRIAIADDYF 269
>gi|146339595|ref|YP_001204643.1| amidase [Bradyrhizobium sp. ORS 278]
gi|146192401|emb|CAL76406.1| Putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 278]
Length = 450
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 177/394 (44%), Gaps = 27/394 (6%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP G+ ++ DLFDI+G VT G + A + V+ L + G IG+T +
Sbjct: 68 APSAFAGIPVSIKDLFDIKGQVTRAGS-RALEDSAPAEADAPAVARLRKAGFVVIGRTNM 126
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP + +PGGSSSGAAV+VA + +LG DT G R+P
Sbjct: 127 TEFAYSGIGINPHYGTPKSAWKREVGYVPGGSSSGAAVSVADRMAYGALGTDTGGSCRIP 186
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA--AQRS 229
+AF GI G++P+ V G +P+S++LD+ G A + VL P A R
Sbjct: 187 AAFNGITGYKPTQARVPLDGGVPLSSTLDSFGPLANTVACCAVLDSVLADEPIRPLASRP 246
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQ--VLKHENLGEYFDSKVPSLKGFH 287
+ + +A +L V + ++ + L RQ +++ E+ D V +KG
Sbjct: 247 VKGLRLAVPTTIVLDELDAEVAETFERALDTL-ARQGALIERIEFPEFLDVGVIGMKGGF 305
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSI 345
+ Y + H + + DP +S I GE + + + IE +
Sbjct: 306 AAA----------ESYAW---HRFLLTAKGDVYDPRVSVRILRGEAITVPD-YIEMLNAR 351
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN--RAFSLLSIASVSGCCQ 403
R+ + A + + D LV PTTA PPK+ + + RA + ++ C
Sbjct: 352 RSLVTRAAARIAPYDA-LVMPTTANAPPKIADLADDAAFARENIRALRNCTFINMIDGCA 410
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+++P + + P + G DR LL+ +
Sbjct: 411 ISLPAHRHGEVPVGLMLAQSGGNDRKLLEIAAGI 444
>gi|385810676|ref|YP_005847072.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase A subunit
[Ignavibacterium album JCM 16511]
gi|383802724|gb|AFH49804.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase A subunit
[Ignavibacterium album JCM 16511]
Length = 472
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 75/115 (65%)
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
T+T V L++ A IGKT DEFA + N + NP S++PGGSS G+AVAVA
Sbjct: 100 TATSVQKLIDEDAIIIGKTNCDEFAMGSSNENSAFGAVLNPIDESRVPGGSSGGSAVAVA 159
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
ADL D SLG DT G +R P+AFCGI G +P+YG VS G+ ++S DT+G FA+
Sbjct: 160 ADLCDASLGTDTGGSIRQPAAFCGIFGMKPTYGRVSRFGLTAFASSFDTIGPFAK 214
>gi|443642601|ref|ZP_21126451.1| Amidase superfamily protein [Pseudomonas syringae pv. syringae B64]
gi|443282618|gb|ELS41623.1| Amidase superfamily protein [Pseudomonas syringae pv. syringae B64]
Length = 457
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 160/356 (44%), Gaps = 51/356 (14%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGAT 106
QPL P G+ A DLFD+ G VT G RT S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAG--AAVRTSLSPALLDAPTVGLLARSGMV 120
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDT 164
+GKT + EFAYS G N H+ TP NP++ S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 121 SLGKTNLSEFAYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDT 180
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 181 AGSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPL------------------- 221
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 222 --TRSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAV 278
Query: 285 GFHKTNGELKNV---------MRLIQRYEFKNN------HNEWIES-VKPALDPDISAEI 328
+ +G L V + LIQ+ + H ++S LDP + +
Sbjct: 279 EALRASGALIEVKPCQAFQATLLLIQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRL 338
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED 384
+ +++ N + R ++ + +L D +L+TPT A+ P L +L++D
Sbjct: 339 EAARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLA--PLLTDD 391
>gi|256369013|ref|YP_003106521.1| amidase [Brucella microti CCM 4915]
gi|255999173|gb|ACU47572.1| amidase [Brucella microti CCM 4915]
Length = 471
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 172/389 (44%), Gaps = 35/389 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G ++ DLFD+ G T G H A A + +V L GA IGKT +
Sbjct: 78 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 134
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA++ G N HY P N P+++PGGSSSGAAV+VA + ++ DT G VR+P+A
Sbjct: 135 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAISSDTGGSVRIPAAL 194
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+P+ + G P++ SLD+VG + R V +L A P
Sbjct: 195 NGLVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILADAVMAGEKPILPE 248
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ + +P D ++ + F + E G D V L G L
Sbjct: 249 VLPVNGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 302
Query: 294 KNVMRL--IQRYEFKNNH-NEWIESVKPALDPDI----SAEIGEMLEISETVIENCKSIR 346
K R+ I E + H + W+ + +D + S I LE ++E K++
Sbjct: 303 KEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAYHALMETRKALA 362
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCC 402
EM +S + TP T P + E+Y +R +LL +A+ C
Sbjct: 363 REMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVENLLLRDTQVANQFDLC 417
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ K PT + AR+ D+ LL
Sbjct: 418 SITLPMPGM-KLPTGLMLTARNDSDKRLL 445
>gi|261754565|ref|ZP_05998274.1| amidase [Brucella suis bv. 3 str. 686]
gi|261744318|gb|EEY32244.1| amidase [Brucella suis bv. 3 str. 686]
Length = 445
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 172/389 (44%), Gaps = 35/389 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA--ASRTSTVVSTLVEGGATCIGKTVVD 114
PL G ++ DLFD+ T G H A A + +V L GA IGKT +
Sbjct: 52 PLDGRIVSIKDLFDVASEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 108
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA++ G N HY P N P+++PGGSSSGAAV+VA + ++G DT G VR+P+A
Sbjct: 109 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 168
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++GF+P+ + G P++ SLD+VG + R V +L A P
Sbjct: 169 NGLVGFKPTARRIPLEGAFPLAPSLDSVG------PLTRTVADAILADAVMAGEKPILPE 222
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGEL 293
+ + +P D ++ + F + E G D V L G L
Sbjct: 223 VLPVNGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLI------GRL 276
Query: 294 KNVMRL--IQRYEFKNNH-NEWIESVKPALDPDI----SAEIGEMLEISETVIENCKSIR 346
K R+ I E + H + W+ + +D + S I LE ++E K++
Sbjct: 277 KEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAYHALMETRKALA 336
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL----SIASVSGCC 402
EM +S + TP T P + E+Y +R +LL +A+ C
Sbjct: 337 REMDERLSGF----DMFATPATPIVAPTIASVSHDEEEY-DRVENLLLRDTQVANQFDLC 391
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ K PT + AR+ D+ LL
Sbjct: 392 SITLPMPGM-KLPTGLMLTARNDSDKRLL 419
>gi|405382677|ref|ZP_11036456.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF142]
gi|397320899|gb|EJJ25328.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF142]
Length = 456
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 93/152 (61%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDIEG T G A + A + + +V+TL G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGMATTAGSVVLA-GDAPAEQDAAIVATLKNAGMLAIGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + + +PGGSSSGA VAVAA LV ++G DT G VR+P+A
Sbjct: 131 FSGLGINPHYGTPENPHSKDEPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAALN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G + G+ P++ SLD++G R
Sbjct: 191 GIVGYKATRGRYAMEGVYPLAASLDSLGPLCR 222
>gi|28871346|ref|NP_793965.1| hypothetical protein PSPTO_4204 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28854597|gb|AAO57660.1| amidase family protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 442
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 170/389 (43%), Gaps = 54/389 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P G+ A DLFD+ G VT G S A + V L G +GKT + EF
Sbjct: 57 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 115
Query: 117 AYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N H+ TP NP + ++PGGSSSG+AVAVAA +V ++G DT G +R+P+AF
Sbjct: 116 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 175
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
++GFR + S G+ P++ +LD+VG RS R +
Sbjct: 176 NSLVGFRSTSRRYSRDGVFPLALTLDSVGPLT---------------------RSVRDAL 214
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL- 293
+ DD P ++ + L R VL+ E + + + G L
Sbjct: 215 VIDDLLCARSKPTS-LLPRSLAGQRFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGALI 273
Query: 294 --------KNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIGEMLEISETV 338
+ +++IQ++ + H ++S LDP + + + ++
Sbjct: 274 EMGHCQAFQATLQVIQQHGWLGAAEAFALHQSLLDSDAASQLDPRVRKRLEAARHMPASL 333
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEM-----LSEDYQNRA 389
+ N + R ++ + +L D +L+TP+ A+ PP P L +E+ L+
Sbjct: 334 LVNLYAARERLQEQL-TLELDGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRLTMP 392
Query: 390 FSLLSIASV---SGCCQVTVPLGYYDKCP 415
SLL++ V SGC +P G P
Sbjct: 393 GSLLNMPGVSLPSGCDASGLPTGLLLSAP 421
>gi|254563032|ref|YP_003070127.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
gi|254270310|emb|CAX26306.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium
extorquens DM4]
Length = 611
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 190/482 (39%), Gaps = 65/482 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P++A T A T+ L+ GA +GKT +D+F
Sbjct: 67 PLWGVPFAVKDNVDVAGLPTTAACPDFAYTPQA---TAPAAERLLAAGAILVGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P+ +PGGSSSG+AVAVA LV F+LG DT G RVP+
Sbjct: 124 ATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I+G +PS G+VS G++P +LDT+ FA + A
Sbjct: 184 IVGLKPSLGSVSGRGVVPACRTLDTLSIFA------------------------GTVAEA 219
Query: 237 DDCFELL-----KIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF----- 286
D F ++ + P R + V + G +V + G F S F
Sbjct: 220 DAVFRVMAGYDPQDPYSRALPVPPRPGALPPGLRVGVPDAAGLIFAGDALSAAAFDGALA 279
Query: 287 --HKTNGELKNVMRLIQRYEFKN--NHNEWI-----------ESVKPALDPDISAEIGEM 331
H G + L + W+ E AL P A IG
Sbjct: 280 DLHTVTGAAATAVDLAPFFAVAGLLYAGPWVAERYQAIRGFMEERPEALHPTTRAIIGAA 339
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF- 390
S E+R A ++ + +LV PT YP P+ N
Sbjct: 340 TGHSAADAFAGLYRLAELRRATEAVWRGIDVLVVPT--YPRPRRVADLAADPVGPNSELG 397
Query: 391 SLLSIASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIAT 449
+ + ++ C + VP + D P+ V+ IA G D + + ++A+ A+
Sbjct: 398 TYTNFVNLLDLCALAVPGRFRADGLPSGVTLIAPRGADGLIAELGARLHAAAGGSLG-AS 456
Query: 450 KSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYL 509
+ ++ A + G++A D+ + + + + LNG + R A +L
Sbjct: 457 GVPIPAEAASRGDRA----QGGDRAQGDEIEIAVVGAHLSGLPLNGE----LTARGARFL 508
Query: 510 ES 511
+
Sbjct: 509 RA 510
>gi|410479584|ref|YP_006767221.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Leptospirillum
ferriphilum ML-04]
gi|206603870|gb|EDZ40350.1| Glutamyl-tRNA(Gln) amidotransferase A subunit/Amidase
[Leptospirillum sp. Group II '5-way CG']
gi|406774836|gb|AFS54261.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Leptospirillum
ferriphilum ML-04]
Length = 492
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 106/211 (50%), Gaps = 9/211 (4%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G A+ D + T A +TVV L+E GA +GKT +
Sbjct: 66 APSPFYGYPVAIKDNLHVRDLPTTCASRMLANFRPV--ENATVVDRLLEAGAIVLGKTNM 123
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DEFA + N NP ++PGGSS G+AVAVAAD+ +LG DT G +R P+A
Sbjct: 124 DEFAMGSSTENSAMGVTRNPWDLRRVPGGSSGGSAVAVAADMAPMALGSDTGGSIRQPAA 183
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
FCG+LG +P+YG +S G++ S+SLD +G FA RH L + + R +
Sbjct: 184 FCGVLGLKPTYGRISRYGLVAFSSSLDQIGPFA------RHAEDALEMMLLLSGPDGRDM 237
Query: 234 II-ADDCFELLKIPADRVVQVVIKSTEKLFG 263
+ + D E+ + +V VI E+ FG
Sbjct: 238 TVESRDPSEMARDFGRKVQGTVIGMPEEFFG 268
>gi|329115689|ref|ZP_08244411.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum
DM001]
gi|326695117|gb|EGE46836.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum
DM001]
Length = 453
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 170/386 (44%), Gaps = 18/386 (4%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+AP PL GL +V DLFD G +T G A AS + + L + G IG+T
Sbjct: 67 QAPSPLAGLPISVKDLFDEAGSITRAGSMVLADA-PPASMDAPAIERLKQAGLISIGRTT 125
Query: 113 VDEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFA+S G N H+ TP NP +PGGSSSGAA++V+ ++ +G DT G R+
Sbjct: 126 MTEFAFSGIGINPHFGTPANPWHRHEKHIPGGSSSGAAISVSDNMAFVGIGSDTGGSCRI 185
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+A G++GF+P+ +S G +P+S++LD++G R K ++ Q +P
Sbjct: 186 PAALTGLVGFKPTARRISTKGTVPLSSTLDSIGSIGRTVKCCWATDSLMATGTLRIQDAP 245
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
+ +L + + T + R++ K+ + E F P LK + N
Sbjct: 246 TGREGSTLRLGILSTSVMEDMDDTVAHTWENCLRRLSKNGIMLETF--TCPPLKEIPQAN 303
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
+ E H +E + DP + I E + + + R ++
Sbjct: 304 SKGG-----FPAAESLAWHQPLLERHRSVYDPFVLQRILRGYEQNAVDYISLRQSRTKLI 358
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSGCCQVT 405
+ ++ ++ PT PK+ + ++ + A +LL +IA+ C ++
Sbjct: 359 QQAADIMNHYDAVILPTVPIIAPKISD---MHDNTRYVATNLLLLRNTTIANFLDLCAIS 415
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLL 431
+P + P + + RH D L
Sbjct: 416 LPCHQMGEAPVGLMVMGRHAEDHILF 441
>gi|422618149|ref|ZP_16686848.1| hypothetical protein PSYJA_13642 [Pseudomonas syringae pv. japonica
str. M301072]
gi|330898528|gb|EGH29947.1| hypothetical protein PSYJA_13642 [Pseudomonas syringae pv. japonica
str. M301072]
Length = 414
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 160/356 (44%), Gaps = 51/356 (14%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGAT 106
QPL P G+ A DLFD+ G VT G RT S A + V L G
Sbjct: 25 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGAA--VRTSLSPALLDAPTVGLLARSGMV 77
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDT 164
+GKT + EFAYS G N H+ TP NP++ S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 78 SLGKTNLSEFAYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDT 137
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 138 AGSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPL------------------- 178
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 179 --TRSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLWRAV 235
Query: 285 GFHKTNGELKNV---------MRLIQRYEFKNN------HNEWIES-VKPALDPDISAEI 328
+ +G L V + LIQ+ + H ++S LDP + +
Sbjct: 236 EALRASGALIEVKPCQAFQATLLLIQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRL 295
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED 384
+ +++ N + R ++ + +L D +L+TPT A+ P L +L++D
Sbjct: 296 EAARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLA--PLLTDD 348
>gi|254511785|ref|ZP_05123852.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A)
[Rhodobacteraceae bacterium KLH11]
gi|221535496|gb|EEE38484.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A)
[Rhodobacteraceae bacterium KLH11]
Length = 455
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 173/397 (43%), Gaps = 48/397 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ ++ DL D+EG VT + R AA R + V L G CIGK + EF
Sbjct: 73 PLDGVPISLKDLIDLEGEVTTAASALY-RDAPAAKRDAIVAQNLSAAGMICIGKVNLTEF 131
Query: 117 AYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N H+ T NP +P + PGGSSSG AV++++ +V S+G DT G VR+P++F
Sbjct: 132 AYSGIGLNPHFGTAINPLSPDVPRAPGGSSSGTAVSISSGIVPCSIGSDTGGSVRIPASF 191
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR--- 231
G++G++ S G +S G+ +S DT+G AR + VLL Q P
Sbjct: 192 NGLVGYKSSEGRISTQGVFALSRMFDTMGPLARSVE-----DCVLLDAAMRGQAGPAVQR 246
Query: 232 ------QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
II+ D + D + V ++ E R E G + L
Sbjct: 247 AGIKGLTIIVPD------TVVMDDLAPAVARNYEATLNR----LEQAGAVLQRR--PLHP 294
Query: 286 FHKTNGELKNVMRLIQRY------EFKNNHNEWIESVKPA-LDPDISAEIGEMLEISETV 338
F + V+RL Y + H +ES A +D + A I +S
Sbjct: 295 FAE-------VIRLTAEYGSLVAADAYVEHRGIVESADRAQVDRRVMARILGGKSMSAAD 347
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASV 398
+ + R +++ I + + ++ PTTA P++ E E + +L S+
Sbjct: 348 VVTLQRARRKLQGWIRDTVG-EALIAMPTTAITAPEIAPLEADDELFHKTNMLVLRNTSL 406
Query: 399 SGCCQ---VTVPLGYYDK-CPTSVSFIARHGGDRFLL 431
+ +P G + PTS+ F A G D LL
Sbjct: 407 GNFLDLPGLALPNGQDENGMPTSILFSAVSGRDDALL 443
>gi|119491326|ref|ZP_01623380.1| amidase [Lyngbya sp. PCC 8106]
gi|119453490|gb|EAW34652.1| amidase [Lyngbya sp. PCC 8106]
Length = 464
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 179/409 (43%), Gaps = 48/409 (11%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PLTG+ FAV +LFDI G +T + R + A++ +T + L + GA +G +D
Sbjct: 70 PGPLTGVPFAVKNLFDIAG-ITTLAGSKINRENPPATQDATAIQRLKQAGAILVGALNMD 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP S + GGSS G+A AVAA+LV F+LG DT G +RVP++
Sbjct: 129 EYAYGFVTENHHYGATPNPHDLSLISGGSSGGSAAAVAANLVPFTLGTDTNGSIRVPASL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSP 230
CG+ GF+P+YG +S G+I S+SLD +G AR + + V +L P +RSP
Sbjct: 189 CGVFGFKPTYGRLSRGGVILFSSSLDHIGPLARSLRDIATVYDILQGEDKHDPVCTKRSP 248
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSL------ 283
+ L +P E G + +K LG YF ++ P +
Sbjct: 249 Q-----------LSLP------------ELETGIKNVKIAVLGGYFSEAWEPEVLEVVSQ 285
Query: 284 --KGFHKTNGEL-------KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
K + T + K LI E N H + S DP I
Sbjct: 286 VAKALNVTQQMIIPEAHRAKAAAYLITACEGSNLHLANLRSRPQDFDPATRDRFLAGALI 345
Query: 335 SETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS 394
T + R + + + IL+ PTT PK+G ++M + + L
Sbjct: 346 PATWYNQAQRFRRWYQQQVRETFRQVDILLAPTTPCVAPKIGQEKMNIDGVELLVRPNLG 405
Query: 395 I----ASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
+ S G ++VP+ + P V IA + +L + + A
Sbjct: 406 LYTQPLSFVGLPVLSVPVKRSGQLPLGVQIIAAPYNEALILRIAKRLEA 454
>gi|427410189|ref|ZP_18900391.1| hypothetical protein HMPREF9718_02865 [Sphingobium yanoikuyae ATCC
51230]
gi|425712322|gb|EKU75337.1| hypothetical protein HMPREF9718_02865 [Sphingobium yanoikuyae ATCC
51230]
Length = 454
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 17/379 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ G ++ DLFD+ G T G A A + + VV+ L + GA +GKT + EF
Sbjct: 77 PIDGAIVSIKDLFDVAGEPTRAGSLILADAPPA-TVDAPVVARLKQAGAVIVGKTNMVEF 135
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N HY TP NPA +++PGGS+SG VAVA + + ++G DT G R+P+A CG
Sbjct: 136 AFSGVGVNPHYGTPGNPADRARVPGGSTSGGGVAVADQMCEIAIGTDTGGSCRIPAALCG 195
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G++P+ V G P+S +LD++G A +L A +PR++ +A
Sbjct: 196 VVGYKPTKARVPTDGAFPLSPTLDSIGPIATSVDACFRTDAIL------AGEAPRRLDLA 249
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
IP + + + F + + G +V + F V
Sbjct: 250 PLKGLRAGIPQGLPLADLDATVAARFADALARLGQAGMTLSDEV--FRQFDAMQALQSPV 307
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
I E H + I + DP + A + +++ + R + ++ +
Sbjct: 308 P--IASVEAYAIHRDRIATRAQDFDPIVLARMQAGRDVTPERHKQMLVERAALVRSMDAR 365
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSED-YQNRAFSLL---SIASVSGCCQVTVPLGYYD 412
L ILV PTT P E+ + D + R LL + + C +++PL
Sbjct: 366 LAGLDILVLPTTPIVAPTQ--AEVANADAFVARNRLLLRNTGLGNSFDLCAISLPLPREG 423
Query: 413 KCPTSVSFIARHGGDRFLL 431
P + +AR G D+ L
Sbjct: 424 GLPVGLMLMARAGQDQRLF 442
>gi|72384146|ref|YP_293500.1| amidase [Ralstonia eutropha JMP134]
gi|72123489|gb|AAZ65643.1| Amidase [Ralstonia eutropha JMP134]
Length = 440
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G VT G + A + V+ L GA IG+T + EF
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGS-KVLDGSVPAPADAPAVARLRAAGAVLIGRTNMSEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N H+ TP P S++ GGS+SG AV+VA D+ +LG DT G +R+PSAFCG
Sbjct: 128 AFSGLGLNPHFGTPRTPFDASRIAGGSTSGGAVSVAEDMSVAALGTDTGGSIRIPSAFCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+ GF+P+ V G +P+STSLD+ G AR
Sbjct: 188 LTGFKPTARRVPLDGAVPLSTSLDSAGPLAR 218
>gi|422657056|ref|ZP_16719499.1| hypothetical protein PLA106_06545 [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331015616|gb|EGH95672.1| hypothetical protein PLA106_06545 [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 457
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 172/390 (44%), Gaps = 56/390 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGATCIGKTVVDE 115
P G+ A DLFD+ G VT G R + S A + V L G +GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAG--ATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSE 129
Query: 116 FAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FAYS G N H+ TP NP + ++PGGSSSG+AVAVAA +V ++G DT G +R+P+A
Sbjct: 130 FAYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAA 189
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
F ++GFR + S G+ P++ +LD+VG RS R
Sbjct: 190 FNSLVGFRSTSRRYSRDGVFPLALTLDSVGPLT---------------------RSVRDA 228
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
++ DD P ++ + L R VL+ E + + + G L
Sbjct: 229 LVIDDLLCARSKPTS-LLPRSLAGQRFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 287
Query: 294 ---------KNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIGEMLEISET 337
+ +++IQ++ + H ++S LDP + + + +
Sbjct: 288 IEMGHCQAFQATLQVIQQHGWLGAAEAFALHQSLLDSDAASQLDPRVRKRLEAARHMPAS 347
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEM-----LSEDYQNR 388
++ N + R ++ + +L D +L+TP+ A+ PP P L +E+ L+
Sbjct: 348 LLVNLYAARERLQEQL-TLELDGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRLTM 406
Query: 389 AFSLLSIASV---SGCCQVTVPLGYYDKCP 415
SLL++ V SGC +P G P
Sbjct: 407 PGSLLNMPGVSLPSGCDASGLPTGLLLSAP 436
>gi|440722768|ref|ZP_20903142.1| hypothetical protein A979_18090 [Pseudomonas syringae BRIP34876]
gi|440725660|ref|ZP_20905924.1| hypothetical protein A987_06417 [Pseudomonas syringae BRIP34881]
gi|440360689|gb|ELP97948.1| hypothetical protein A979_18090 [Pseudomonas syringae BRIP34876]
gi|440368455|gb|ELQ05491.1| hypothetical protein A987_06417 [Pseudomonas syringae BRIP34881]
Length = 457
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 160/356 (44%), Gaps = 51/356 (14%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGAT 106
QPL P G+ A DLFD+ G VT G RT S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAG--AAVRTSLSPALLDAPTVGLLARSGMV 120
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDT 164
+GKT + EFAYS G N H+ TP NP++ S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 121 SLGKTNLSEFAYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDT 180
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 181 AGSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPL------------------- 221
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 222 --TRSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLWRAV 278
Query: 285 GFHKTNGELKNV---------MRLIQRYEFKNN------HNEWIES-VKPALDPDISAEI 328
+ +G L V + LIQ+ + H ++S LDP + +
Sbjct: 279 EALRASGALIEVKPCQAFQATLLLIQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRL 338
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED 384
+ +++ N + R ++ + +L D +L+TPT A+ P L +L++D
Sbjct: 339 EAARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLA--PLLTDD 391
>gi|393760451|ref|ZP_10349261.1| amidase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393161308|gb|EJC61372.1| amidase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 451
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 152/331 (45%), Gaps = 19/331 (5%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
GL +V +L DI GY+T G + A + +T+V L+ GA IG T + EFA+S
Sbjct: 71 GLPMSVKNLHDIAGYIT-LGGSTVLKDAEPAEQHATIVERLLRAGAILIGSTNMTEFAFS 129
Query: 120 INGTNKHYDTPTN--PAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
G N HY TP + +++PGGSSSGA VAVA + FS+G DT G +R+PSAF G+
Sbjct: 130 GLGINPHYGTPRSVWDRDNARIPGGSSSGAGVAVAQGMSVFSIGTDTGGSIRIPSAFNGL 189
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
GF+P+ V G +P+S SLD+ G A + V +L P+ +P +
Sbjct: 190 TGFKPTAERVPSEGTMPLSRSLDSNGPLAVSVECCAIVDAILTDQPYVPVATPALETVR- 248
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVL---KHENLGEYFDSKVPSLKGFHKTNGELK 294
L +P V + ++ F R + +H + E D +P + N +
Sbjct: 249 -----LAVPKTFVFDGIDQTVRAAFDRAIALLREHGAVVEEID--LPEFEQLPHINRKGG 301
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
V E + H + ++S DP +++ I +I + R SA+
Sbjct: 302 FVC-----AEAWSVHRDTLQSKGEQYDPRVASRILRGKDIDCADYIELQDTRQAWISAVE 356
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDY 385
S L+ ++ PT P++ + E Y
Sbjct: 357 SRLERYDAVLMPTVPVVAPRIADLQASDEVY 387
>gi|55981766|ref|YP_145063.1| amidase [Thermus thermophilus HB8]
gi|55773179|dbj|BAD71620.1| probable amidase [Thermus thermophilus HB8]
Length = 434
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 163/385 (42%), Gaps = 43/385 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH-------PEWARTHSAASRTSTVVSTLVEGGATCIG 109
PL GL V DLF ++G T G PE AR V L E GA
Sbjct: 64 PLHGLPLTVKDLFPVKGMPTRAGTKAPLPPLPEEARA----------VRRLREAGALLFA 113
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KT + E A I G N N PS+ GGSS G+AVAVA + SLG DT G +R
Sbjct: 114 KTNMHEIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIR 173
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQ 227
+P+ F G++GF+PSYG VS G +P+S S D G R + + +L +P
Sbjct: 174 IPAGFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGESIPLEGV 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGF 286
++P + +P D + + K F R + L E + +P L+G
Sbjct: 234 QNP-----------VFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-LEGV 281
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
++ RL+ RYE H + ++ P + + L ++E + + R
Sbjct: 282 YEV------YTRLV-RYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDAVAER 334
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ---NRAFSLLSIA-SVSGCC 402
+R + L+ L+ P P P LG +E+ E + AF L++ S+ G
Sbjct: 335 EALRLELVKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVP 394
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGD 427
+ +P + P + + +G D
Sbjct: 395 TLALPFAKVEGMPVGLQVVGAYGED 419
>gi|241666612|ref|YP_002984696.1| hypothetical protein Rleg_6695 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862069|gb|ACS59734.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 456
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG T G A+ A R + VV+ L + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLFDMEGLPTTAGSVVLAKDMPA-KRDAAVVALLRQAGMVAVGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP ++PGGSSSGA V VAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G + G+ P++ SLD++G R
Sbjct: 191 GIVGYKATRGRHAMAGVYPLAKSLDSLGPLCR 222
>gi|164608860|gb|ABY62765.1| IacH [Pseudomonas putida]
Length = 374
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 185/397 (46%), Gaps = 53/397 (13%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEFA 117
+G V D D+ G T A H+ A R + VVS L+ GA GK + E A
Sbjct: 13 SGPRVVVKDTLDVAGTATR--ASSQALEHAPLAERHAEVVSNLLAAGARLTGKVSLHELA 70
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ G N++ T NP P ++PGGSSSG+A AVAA L DFSLG DT G VR+P+ CG+
Sbjct: 71 FGTTGINRYTGTAANPRFPGRIPGGSSSGSAAAVAAGLADFSLGTDTGGSVRIPACCCGV 130
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARD-PKILRHVGHVLLQLPFAAQRSPRQIIIA 236
G +P++G VS G++P TSLD VG FA P ++R + ++ F + P + I
Sbjct: 131 FGLKPTFGRVSRKGVMPARTSLDCVGPFAASLPMLVRAMS--MIDPTFTPAQVPTKARIG 188
Query: 237 DDCFELLKIPAD----RVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+L++ A+ +VVQ + ++ G LKH G +++
Sbjct: 189 -----VLRVTAEAAIHKVVQGALAASGLPLGNVELKH--FGAAYEAG------------- 228
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
M +I R F+ +E+ K + DI+ + + S++ + + +R
Sbjct: 229 ----MVVINRETFEGC-GHLLETGK--VGADIAGRLAAAGQTSDSALAEAEGVRTRFTEE 281
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN-RAF----SLLSIASVSGCCQVTVP 407
+ +L +L PT P +L ED + RA SL+ ++SG +++P
Sbjct: 282 VDRMLASYDVLALPTMPDFPLRL-------EDATDTRAVLGMTSLVRPFNLSGHPALSIP 334
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQ----NMYAS 440
LG P + +A G D LL + N+YA+
Sbjct: 335 LGSECGLPVGLQLVAAKGADEKLLAVAERLLLNLYAN 371
>gi|421625224|ref|ZP_16066079.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC098]
gi|408699405|gb|EKL44884.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC098]
Length = 369
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 181/392 (46%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTFTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCK---SIRNEMRSAIS 354
YE N + E + L I +++ G +L+ + T +E K +++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNGRLLKAAHTTLEQVKQAEAVKAQLTKELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCIDVMQ 369
>gi|417552111|ref|ZP_12203181.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-81]
gi|417560391|ref|ZP_12211270.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC137]
gi|421200069|ref|ZP_15657229.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC109]
gi|421457206|ref|ZP_15906543.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-123]
gi|421632261|ref|ZP_16072922.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-13]
gi|421803669|ref|ZP_16239582.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-A-694]
gi|395522973|gb|EJG11062.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC137]
gi|395563670|gb|EJG25322.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC109]
gi|400206930|gb|EJO37901.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-123]
gi|400392370|gb|EJP59416.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-81]
gi|408710239|gb|EKL55472.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-13]
gi|410412629|gb|EKP64485.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-A-694]
Length = 369
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTLTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQTLQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ G +L+ + T +E K +R ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNGRLLKAAATTLEQVKQAEVVRAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|424878276|ref|ZP_18301916.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392520768|gb|EIW45497.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 456
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG T G A+ A R + VV+ L + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLFDMEGLPTTAGSVVLAKDMPA-KRDAAVVALLRQAGMVAVGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP ++PGGSSSGA V VAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G + G+ P++ SLD++G R
Sbjct: 191 GIVGYKATRGRHAMAGVYPLAKSLDSLGPLCR 222
>gi|115358738|ref|YP_775876.1| amidase [Burkholderia ambifaria AMMD]
gi|115284026|gb|ABI89542.1| Amidase [Burkholderia ambifaria AMMD]
Length = 446
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 158/392 (40%), Gaps = 17/392 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G V FD EG+VT G A A + +VS L GA + +T + EF
Sbjct: 65 PLAGAVLTVKACFDCEGWVTHAGSRVLA-DEPPARTDAAMVSMLRRAGAVLVAQTAMTEF 123
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY G N+ Y TPT P ++ GGSSSGAAV+VA D SLG DT G R+P+AF
Sbjct: 124 AYGALGVNRAYGTPTTPLDTRRERVAGGSSSGAAVSVALGAADLSLGSDTSGSARIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ GF+PS G + G+ +STS D G A + R V L A +R P
Sbjct: 184 CGVTGFKPSRGRYASDGMQLLSTSFDVPGLLAATVGLCRQA-DVALHGRDARRRRP--AT 240
Query: 235 IADDCFELLK-IPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
I D F + + D V VV ++ + R + V + G +
Sbjct: 241 IRDLQFVVPEPFATDDVDPVVGRAFDAWLSRLSAHGARIRRKRLDCVAEAGAVARAGGII 300
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
++ R + + DP + A I ++ +
Sbjct: 301 AAEAFMLHRARLATAADRY--------DPLVGARIAAGEQVRAHDYAAALLRLAALADTY 352
Query: 354 SSLLKDDGILVTPTTAYPPPKLG--GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
+ L D ++TPT PP++ E + R F L A+ ++VP
Sbjct: 353 HAELGDADAVLTPTVPMLPPRVAELADEAAYLEQNARTFRLTEFANRLDLPSISVPGDLR 412
Query: 412 DKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
++ P + R D LLD + +L +
Sbjct: 413 NRQPVGLLITGRRHEDARLLDVAAMVERALTD 444
>gi|398826108|ref|ZP_10584372.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
gi|398221825|gb|EJN08221.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
Length = 451
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 111/234 (47%), Gaps = 33/234 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL F+V D D+ G T PE+A A TS VV+ + GA IGKT +D+F
Sbjct: 66 PLYGLVFSVKDCIDVAGEQTTSACPEFAYV---AQHTSPVVADAIAAGAIYIGKTNMDQF 122
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y NP +PGGSSSGAAV+VA F+ G DT G RVP+++CG
Sbjct: 123 ATGLVGVRSPYGIARNPHHADYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASYCG 182
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+P+ GA S G++ S DT+ + + P V VL A+ P
Sbjct: 183 VTGFKPAPGAFSQRGMVYACRSFDTISLYTQQPDDAYDVYRVL------ARHDPA----- 231
Query: 237 DDCF---------------ELLKIPADRVVQVVI---KSTEKLFGRQVLKHENL 272
DCF LKI R+ Q+ TE+LFG + + L
Sbjct: 232 -DCFSPVDFAGWTEQASPARPLKIATPRLDQLRFFGNDETERLFGDALRRLRQL 284
>gi|398869323|ref|ZP_10624698.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
gi|398230656|gb|EJN16670.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
Length = 452
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 182/398 (45%), Gaps = 36/398 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D YVT +G +A +R + V L E GA +GKT+ EF
Sbjct: 79 PLHGIPLAVKDNIDTFDYVTTYGSAHFAGFKP--NRDALCVQRLREAGAVIVGKTLTHEF 136
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G NP + GGSS+G+A AVA+ +V +LG DT G +R+P+A CG
Sbjct: 137 AYGPTGDRSLQGAARNPWDARCITGGSSAGSAAAVASGMVPLALGTDTGGSIRIPAALCG 196
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRHVGHVLLQLPFAAQRSPRQI 233
+GF+PS+ +V G+ P+++SLD VG A D ++L V P A R R
Sbjct: 197 TIGFKPSFASVPLQGVFPLASSLDHVGPIANHVEDARLLFEVVAGRACAPDAEPRPLRVG 256
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
I F + DR V ++ ++LFG + + L P G +
Sbjct: 257 WITSGSFGPVDAELDR---QVYQAAQQLFGEALQETAELA-------PLASG-------M 299
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE----- 348
K+ + ++QR E H E ++ A + E+ E LE+S V + IR +
Sbjct: 300 KDTLLVLQRAEAFEVHAERMQEAPHAFE----QEVRERLELSREV-RGWQYIRAQAGQAS 354
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRA--FSLLSIASVSGCCQV 404
++A++ L + +LV+P+ + +E+ +D RA S S +++G +
Sbjct: 355 FKAAMARLFERYDLLVSPSVPITATAVDAREVRVGEQDIDVRAAVLSYTSAWNLTGLPAI 414
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
++P+G P + I G D LL + + Q
Sbjct: 415 SLPVGQVRGMPVGLQVIGAAGEDDRLLRVMAQRFVRRQ 452
>gi|262279246|ref|ZP_06057031.1| Glu-tRNA amidotransferase [Acinetobacter calcoaceticus RUH2202]
gi|262259597|gb|EEY78330.1| Glu-tRNA amidotransferase [Acinetobacter calcoaceticus RUH2202]
Length = 369
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ I KT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLDVEP-AQYDAEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A A+AA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAIAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ--LPFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPSFKPAECTSAPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD V+ I Q L+ NL + KV + ++ N
Sbjct: 187 -LAVLDVKADDVIWNCI--------HQALQKANL-QTTSEKVEHFDAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPAL-DPDISAEIGEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E K L PD++ +L+ +ET +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTKTGLIGPDVN---NRLLKAAETTLEQVKQAEVVKQQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
+LL+ L+ PT PPK+ E L+ R F+L SG ++VPL
Sbjct: 284 ALLEKYDALILPTLPQIPPKVAEAENTVAFLNLTALVRPFNL------SGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
+ P + +++H D L V+ ++Q
Sbjct: 338 SEGLPVGLQIVSKHQNDEKLCAIVKFCVDAMQ 369
>gi|358398411|gb|EHK47769.1| hypothetical protein TRIATDRAFT_316778 [Trichoderma atroviride IMI
206040]
Length = 715
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 26 LKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWAR 85
+ + ++D A KL +PLPP L G+ FA+ D D+EG VT +A
Sbjct: 286 ISRQSQEDVLAAARKLSATYAGKPLPP-----LFGIPFAIKDNIDVEGVVTTAACESYAY 340
Query: 86 THSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSS 145
T A+ T+ + L++ GA IGK +++ A + G Y + +PGGSSS
Sbjct: 341 T---ATFTAPSIQHLLDAGAIYIGKLNLEQLATGLVGRRSPYGDLHCFHSKDHVPGGSSS 397
Query: 146 GAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWF 205
G+AVAVAA LV F++G DT G VR P+AF G++GF+P+ G +S G +P SLDT+G
Sbjct: 398 GSAVAVAAGLVSFAIGTDTAGSVRAPAAFNGVVGFKPTKGTISARGAVPACQSLDTIGVL 457
Query: 206 ARDPKILRHVGHVL 219
A R V +VL
Sbjct: 458 APSVADARQVWYVL 471
>gi|83746058|ref|ZP_00943113.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia
solanacearum UW551]
gi|207742446|ref|YP_002258838.1| amidase protein [Ralstonia solanacearum IPO1609]
gi|83727241|gb|EAP74364.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia
solanacearum UW551]
gi|206593836|emb|CAQ60763.1| amidase protein [Ralstonia solanacearum IPO1609]
Length = 448
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 178/403 (44%), Gaps = 39/403 (9%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G V+ G A A+ + V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVSAAGSRALAH-QPPAAADAVAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+P+AF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-------QLPFAAQ 227
C + GF+P+ V G +P+STSLD+ G A V VL +P A
Sbjct: 189 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGL 248
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE---YFDSKVPSLK 284
R L + D V + + F R V++ E G FD P L
Sbjct: 249 R--------------LGLTRDYVGADLDDTVATAFERAVMRLEQAGARIVRFD--FPELL 292
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS 344
+ NG + + + + H + + D ++A I +++ + +
Sbjct: 293 QLPEING--GGGLPAAESWAWHRPH---LARAEAQYDRRVAARIRRGEQMTAAAYLDVMA 347
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLL----SIASVS 399
R M +A L + + PT A PP++ E ++D Q R +L+ S+ +
Sbjct: 348 ARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLE--ADDTQFFRTNALVLRNPSVINFL 405
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +T+P+ D+ P +S D +L + + A+L+
Sbjct: 406 DGCALTLPIHAADELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|424778152|ref|ZP_18205103.1| amidase [Alcaligenes sp. HPC1271]
gi|422886980|gb|EKU29391.1| amidase [Alcaligenes sp. HPC1271]
Length = 408
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 168/378 (44%), Gaps = 18/378 (4%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
GL +V +L DI G +T G + A + +T+V L+ GA IG T + EFA+S
Sbjct: 28 GLPMSVKNLHDIAGCIT-LGGSAVLKDAEPAEQNATIVERLLRAGAILIGSTNMTEFAFS 86
Query: 120 INGTNKHYDTPTN--PAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
G N HY TP + +++PGGSSSGA VAVA + FS+G DT G +R+PSAF G+
Sbjct: 87 GLGINPHYGTPRSVWDRDNARIPGGSSSGAGVAVAQGMSVFSIGTDTGGSIRIPSAFNGL 146
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
GF+P+ V G +P+S SLD+ G A + V +L P+ +P A
Sbjct: 147 TGFKPTAERVPSEGTMPLSRSLDSNGPLAASVECCAIVDSILTDQPYVPVATP-----AL 201
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQV-LKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
D L +P V + ++ F R + L E + +P + N + V
Sbjct: 202 DTLR-LAVPKTFVFDGIDETVRAAFDRAIALLREQGAVVEEINLPEFDQLPQINRKGGFV 260
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
E + H + ++S DP +++ I +I + R SA+ S
Sbjct: 261 C-----AEAWSVHRDTLQSKGEQYDPRVASRILRGKDIDCADYIELQDTRQAWISAVESR 315
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPLGYYDK 413
L+ ++ PT P++ + E Y +L ++ + C +++P D+
Sbjct: 316 LERYDAVLMPTVPVVAPRIADLKESDEVYFATNGLVLRNPTLINFLDGCALSLPCHAADE 375
Query: 414 CPTSVSFIARHGGDRFLL 431
P + A D LL
Sbjct: 376 APVGLMVAAPAYHDEHLL 393
>gi|402486979|ref|ZP_10833806.1| hypothetical protein RCCGE510_04727 [Rhizobium sp. CCGE 510]
gi|401814071|gb|EJT06406.1| hypothetical protein RCCGE510_04727 [Rhizobium sp. CCGE 510]
Length = 460
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFD+EG T G A A R + VV L + G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDVEGLPTTAGSVVLA-DEKPAKRDAAVVDLLRQAGMVAIGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSGA VAVAA LV ++G DT G VR+P+A
Sbjct: 131 FSGLGINPHYGTPVNPRSNDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAALN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G + G+ P++ SLD++G R
Sbjct: 191 GIIGYKATRGRHAMAGVYPLAKSLDSLGPLCR 222
>gi|383785121|ref|YP_005469691.1| glutamyl-tRNA (Gln) amidotransferase A subunit/Amidase
[Leptospirillum ferrooxidans C2-3]
gi|383084034|dbj|BAM07561.1| putative glutamyl-tRNA (Gln) amidotransferase A subunit/Amidase
[Leptospirillum ferrooxidans C2-3]
Length = 493
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G A+ D +IEG T A S T+T VS L+ GA +GKT +DEFA
Sbjct: 78 GYPIAIKDNLNIEGLPTTCASRILANHRSI--YTATAVSRLLSAGAVVLGKTNMDEFAMG 135
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ N NP ++PGGSS G+AVAV+ + SLG DT G +R P+AFCG+LG
Sbjct: 136 SSTENSAMGITRNPWDHDRVPGGSSGGSAVAVSGGMAPMSLGSDTGGSIRQPAAFCGVLG 195
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV-----GHVLLQLPFAAQRSPRQII 234
+P+YG +S G++ S+SLD +G FA++P HV GH L + ++ R P +++
Sbjct: 196 LKPTYGRISRQGLVAFSSSLDQIGPFAQNPLDALHVTVLLSGHDPLDMT-SSTRDPLEMV 254
>gi|398942607|ref|ZP_10670411.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM41(2012)]
gi|398160505|gb|EJM48774.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM41(2012)]
Length = 451
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 183/394 (46%), Gaps = 36/394 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D +VT +G +A SR + V L E GA +GKT+ EF
Sbjct: 79 PLHGIPVAVKDNIDTFDHVTTYGSAHFAGFKP--SRDALCVQRLREAGAVIVGKTLTHEF 136
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G NP + GGSS+G+A AVA+ +V +LG DT G +R+P+ CG
Sbjct: 137 AYGPTGDRSLQGAARNPWDARCITGGSSAGSAAAVASGMVPLALGTDTGGSIRIPAGLCG 196
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRHVGHVLLQLPFAAQRSPRQI 233
++GF+PS+ +V G+ P+S+SLD VG A D ++L V + P A R R
Sbjct: 197 VVGFKPSFASVPLEGVFPLSSSLDHVGPIANHVEDARLLFEVVAGRVCAPMANPRPLRVG 256
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
I F + DR V ++ ++LFG + L VP E+
Sbjct: 257 WITTGSFGPVDAELDR---QVYQAAQQLFGEALQDAAEL-------VP-------LAAEM 299
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV----IENCKSIRNEM 349
K+ + ++QR E + H E ++ + E+ E LE+S V +S + +
Sbjct: 300 KDTLLVLQRAEAFDVHAERMQDAPHTFE----QEVRERLELSREVRGWQYIRAQSSQVRL 355
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRAFSLLSIAS---VSGCCQV 404
++A++ L + LV+P+ + +E+ +D RA +LLS S ++G +
Sbjct: 356 KAAMARLFEHYDFLVSPSVPITATAVDAREVRVGEQDIDVRA-ALLSHTSAWNLTGLPAI 414
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
++P+G P + I G D LL + +
Sbjct: 415 SLPVGLLRGMPVGLQVIGAAGEDDRLLRVMAQRF 448
>gi|148553810|ref|YP_001261392.1| amidase [Sphingomonas wittichii RW1]
gi|148499000|gb|ABQ67254.1| Amidase [Sphingomonas wittichii RW1]
Length = 452
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 173/403 (42%), Gaps = 43/403 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G +V + D++G +T G R A+ S+VVS L GA +G T + EFA
Sbjct: 58 LDGALVSVKAMLDVQGLLTDAGSATL-RGRPPAASDSSVVSRLRSAGAVVVGTTQMTEFA 116
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+S GTN ++ NP ++ GGSSSGAAV+V L D ++G DT G +R+P+A CG+
Sbjct: 117 FSAVGTNPNFPALGNPHDAERICGGSSSGAAVSVGGGLADIAIGSDTGGSLRIPAALCGL 176
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
+GF+P+ V G P+S +LD++G AR K+ VL
Sbjct: 177 VGFKPTASRVPAAGSFPLSQTLDSIGPIARSVKLCALADSVLAT---------------G 221
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK--GFHKTNGELKN 295
++ I DR VV + +LF + L + FD + L+ ++G L+
Sbjct: 222 KASDVAAIGVDRFRLVVARG--RLF--EGCDQAVL-DAFDGAIDHLRRSDVRISDGSLEP 276
Query: 296 VMRLIQRYEFKNN----------HNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
++ + R + + I + P +DP+ + I +S +
Sbjct: 277 ILDELARIDGLGTFPPVELAATLRSSGITDLAP-VDPNTRSRIEAGSGLSAVDYLEMARL 335
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSG 400
R ++ ++D + V PT P +S+ Q R + L +A++
Sbjct: 336 RRQLADGFERSMEDGEVYVVPTVPIVAPT---TSSVSDPEQFRRINALLLRNPRVANLLD 392
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
C +++PL P + I R DR LL + L +
Sbjct: 393 CPSISIPLPSR-GLPVGMMLIGRRNADRHLLSIALRLEGILAQ 434
>gi|254786061|ref|YP_003073490.1| amidohydrolase, AtzE family [Teredinibacter turnerae T7901]
gi|237685241|gb|ACR12505.1| amidohydrolase, AtzE family [Teredinibacter turnerae T7901]
Length = 463
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G +FAV +LFDI G VT G R HS AS+ +T++ L GA G +
Sbjct: 62 AEMPLAGATFAVKNLFDIAGEVTLAGSKLNER-HSPASQDATLIERLENAGAILTGALNM 120
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
E+AY G N H+ NP M GGSSSG+A AVAA LVDFSLG DT G +RVP++
Sbjct: 121 GEYAYDFTGENCHHGNCGNPYKLDHMAGGSSSGSAAAVAAGLVDFSLGSDTNGSIRVPAS 180
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
FCGI G +P+YG + G P S SLD +G AR + L V VL
Sbjct: 181 FCGIFGLKPTYGRLPRTGTFPFSDSLDHLGPLARSTQDLARVYDVL 226
>gi|384438679|ref|YP_005653403.1| Amidase/amidotransferase [Thermus sp. CCB_US3_UF1]
gi|359289812|gb|AEV15329.1| Amidase/amidotransferase [Thermus sp. CCB_US3_UF1]
Length = 434
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 170/388 (43%), Gaps = 49/388 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH-------PEWARTHSAASRTSTVVSTLVEGGATCIG 109
PL GL V DLF ++G T G PE A+ V L E GA
Sbjct: 64 PLHGLPLTVKDLFPVKGMPTRAGTQAPLPPLPEEAQA----------VRRLKEAGALIFA 113
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KT + E A I G N N P++ GGSS G+AVAVA + SLG DT G +R
Sbjct: 114 KTHMHEIALGITGENPWTGPVRNAIDPTRQAGGSSGGSAVAVALGIGLASLGTDTGGSIR 173
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQ 227
+P+AF G++GF+PS+G +S G +P+S S D G AR + + +L +P
Sbjct: 174 IPAAFNGVVGFKPSFGRISLEGALPLSRSTDHAGPLARTVRDAHFLTEILAGESIPLEGP 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL----GEYFDSKVPSL 283
++P + D E R+ Q V K+ ++L E+L E + +P L
Sbjct: 234 QNP-TFGVPLDFLE------GRLGQGVRKAFQRLL-------EDLPLLRAEVREVSLP-L 278
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCK 343
G ++ RL+ RYE H + ++ P + + L ++E +
Sbjct: 279 PGAYEV------YTRLV-RYEAARIHEKALKEHPEGFSPSVREALLAGLALTEKDYRDAV 331
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ---NRAFSLLSIA-SVS 399
+ R +R +++ L+ L+ P P P LG +E+ E + AF L++ S+
Sbjct: 332 AEREALRLSLTKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFLTLTLPFSLL 391
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGD 427
G +++P D P + + + D
Sbjct: 392 GVPALSLPFARVDGMPVGLQVVGPYAED 419
>gi|422669252|ref|ZP_16729101.1| hypothetical protein PSYAP_24076 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330981610|gb|EGH79713.1| hypothetical protein PSYAP_24076 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 457
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 155/338 (45%), Gaps = 31/338 (9%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGAT 106
QPL P G+ A DLFD+ G VT G RT S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAG--AAVRTSLSPALLDAPTVGLLARSGMV 120
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDT 164
+GKT + EFAYS G N H+ TP NP++ S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 121 SLGKTNLSEFAYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDT 180
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G +RVP+A G++GFR + S G+ P++ +LD+VG R + + +L
Sbjct: 181 AGSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVIDDLLCARSK 240
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
+ PR + + + +RV V + L R V G + K +
Sbjct: 241 PSSLIPRSLAGQRFLLDQAVLEDERVTPAV---RDNLL-RAVEALRACGALIEVK--PCQ 294
Query: 285 GFHKTNGELKNVMRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIGEMLEISET 337
F T + LIQ+ + H ++S LDP + + + +
Sbjct: 295 AFQAT-------LLLIQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRLEAARSMPAS 347
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL 375
++ N + R ++ + +L D +L+TPT A+ P L
Sbjct: 348 LLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPL 384
>gi|293607950|ref|ZP_06690253.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427425982|ref|ZP_18916054.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-136]
gi|292828523|gb|EFF86885.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425697314|gb|EKU66998.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-136]
Length = 369
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 178/391 (45%), Gaps = 52/391 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ I KT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPAQDD-AEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPTEFTSAPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL + KV + + ++ N
Sbjct: 187 -LAVLDVSADEVVWNCI--------HQALQKANLDTTLE-KVEYFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS---IRNEMRSAISS 355
YE E E+ + D++ G +L+ + T +E K +R ++ + +
Sbjct: 234 ----YENWQAFGELTET--GLIGSDVN---GRLLKAAHTTLEQVKQAEVVRAQLTQELDA 284
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGYY 411
LL+ LV PT PPK +SE AF +L+ ++SG ++VPL
Sbjct: 285 LLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTALVRPFNLSGHPAISVPLETS 338
Query: 412 DKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 339 EGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|240140543|ref|YP_002965023.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Methylobacterium
extorquens AM1]
gi|240010520|gb|ACS41746.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium
extorquens AM1]
Length = 611
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 193/472 (40%), Gaps = 45/472 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D DI G T P++A T A T+ V L+ GA +GKT +D+F
Sbjct: 67 PLWGVPFAVKDNVDIAGLPTTAACPDFAYTPQA---TAPAVERLLAAGAILVGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P+ +PGGSSSG+AVAVA LV F+LG DT G RVP+
Sbjct: 124 ATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA----RDPKILRHVGHVLLQLPF--AAQRSP 230
I+G +PS G+VS G++P +LDT+ FA + R + Q P+ A P
Sbjct: 184 IVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADVVFRVMAGYDPQDPYSRALPVPP 243
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFD--------SKVP 281
R + P RV V + +F L G D +
Sbjct: 244 RPGALP---------PGLRV--GVPDAASLIFAGDALSANAFDGALADLDTVIGGAAVTV 292
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
L F G L + +RY+ +IE AL P A IG S
Sbjct: 293 DLAPFFAVAGLLYAGPWVAERYQAIRG---FIEEHPEALHPTTRAIIGAATGHSAADAFA 349
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF-SLLSIASVSG 400
E+R A ++ + +LV PT YP P+ N + + ++
Sbjct: 350 GLYRLAELRRATEAVWRGIDVLVVPT--YPRPRRVADLAADPVGPNSELGTYTNFVNLLD 407
Query: 401 CCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFN 459
C + VP + D P+ V+ IA G D + + ++A+ T
Sbjct: 408 LCALAVPGRFRADGFPSGVTLIAPRGADGLIAELGACLHAAAG-----GTLGASGVPIPA 462
Query: 460 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLES 511
+ S + G++A D+ + + + + LNG + R A +L +
Sbjct: 463 EAASPGDRAKGGDRAQGDEIEIAVVGAHLSGLPLNGE----LTTRGARFLRA 510
>gi|46199748|ref|YP_005415.1| amidase [Thermus thermophilus HB27]
gi|46197374|gb|AAS81788.1| amidase/amidotransferase [Thermus thermophilus HB27]
Length = 434
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 163/385 (42%), Gaps = 43/385 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH-------PEWARTHSAASRTSTVVSTLVEGGATCIG 109
PL GL V DLF ++G T G PE AR V L E GA
Sbjct: 64 PLHGLPLTVKDLFPVKGMPTRAGTKAPLPPLPEEARA----------VRRLREAGALLFA 113
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KT + E A I G N N PS+ GGSS G+AVAVA + SLG DT G +R
Sbjct: 114 KTNMHEIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIR 173
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQ 227
+P+ F G++GF+PSYG VS G +P+S S D G R + + +L +P
Sbjct: 174 IPAGFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGESIPLEGV 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGF 286
++P + +P D + + K F R + L E + +P L+G
Sbjct: 234 QNP-----------VFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-LEGV 281
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
++ RL+ RYE H + ++ P + + L ++E + + R
Sbjct: 282 YEV------YTRLV-RYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDAVAER 334
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ---NRAFSLLSIA-SVSGCC 402
+R + L+ L+ P P P LG +E+ E + AF L++ S+ G
Sbjct: 335 EALRLELVKALRGVDALLLPVHPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVP 394
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGD 427
+ +P + P + + +G D
Sbjct: 395 TLALPFAKVEGMPVGLQVVGAYGED 419
>gi|418062273|ref|ZP_12700072.1| allophanate hydrolase [Methylobacterium extorquens DSM 13060]
gi|373564185|gb|EHP90315.1| allophanate hydrolase [Methylobacterium extorquens DSM 13060]
Length = 611
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 193/472 (40%), Gaps = 45/472 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D DI G T P++A T A T+ V L+ GA +GKT +D+F
Sbjct: 67 PLWGVPFAVKDDVDIAGLPTTAACPDFAYTPQA---TAPAVERLLAAGAILVGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P+ +PGGSSSG+AVAVA LV F+LG DT G RVP+
Sbjct: 124 ATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA----RDPKILRHVGHVLLQLPF--AAQRSP 230
I+G +PS G+VS G++P +LDT+ FA + R + Q P+ A P
Sbjct: 184 IVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADVVFRVMAGYDPQDPYSRALPVPP 243
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFD--------SKVP 281
R + P RV V + +F L G D +
Sbjct: 244 RPGALP---------PGLRV--GVPDAASLIFAGDALSANAFDGALADLDTVIGGAAVTV 292
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
L F G L + +RY+ +IE AL P A IG S
Sbjct: 293 DLAPFFAVAGLLYAGPWVAERYQAIRG---FIEEHPEALHPTTRAIIGAATGHSAADAFA 349
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF-SLLSIASVSG 400
E+R A ++ + +LV PT YP P+ N + + ++
Sbjct: 350 GLYRLAELRRATEAVWRGIDVLVVPT--YPRPRRVADLAADPVGPNSELGTYTNFVNLLD 407
Query: 401 CCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFN 459
C + VP + D P+ V+ IA G D + + ++A+ T
Sbjct: 408 LCALAVPGRFRADGFPSGVTLIAPRGADGLIAELGACLHAAAG-----GTLGASGVPIPA 462
Query: 460 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLES 511
+ S + G++A D+ + + + + LNG + R A +L +
Sbjct: 463 EAASPGDRAKGGDRAQGDEIEIAVVGAHLSGLPLNGE----LTTRGARFLRA 510
>gi|39934478|ref|NP_946754.1| allophanate hydrolase [Rhodopseudomonas palustris CGA009]
gi|39648327|emb|CAE26847.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopseudomonas
palustris CGA009]
Length = 608
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P +A T S T+ V L++ GA IGKT +D+F
Sbjct: 71 PLWGIPFAVKDNIDVAGLPTTAACPGFAST---PSETAFAVQRLLDAGAVLIGKTNLDQF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P +PGGSSSG+AV VA LV F+LG DT G RVP+A
Sbjct: 128 ATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVVVAHGLVTFALGTDTAGSGRVPAALNN 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G+VS G++P +LDT+ FA
Sbjct: 188 IVGLKPSLGSVSSRGMVPACRTLDTISVFA 217
>gi|170750954|ref|YP_001757214.1| allophanate hydrolase [Methylobacterium radiotolerans JCM 2831]
gi|170657476|gb|ACB26531.1| allophanate hydrolase [Methylobacterium radiotolerans JCM 2831]
Length = 601
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 50 LPPKAP--HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
LPP P PL G+ FAV D D+ G T P++A T + T+ V+ L GA
Sbjct: 56 LPPFDPATMPLWGVPFAVKDNIDVAGLPTTAACPDFAHTPA---ETAPAVARLRAAGAIL 112
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
IGKT +D+FA + G Y P N P+ +PGGSSSG+AVAVA +V F+LG DT G
Sbjct: 113 IGKTNLDQFATGLVGLRTPYPAPRNAIDPAYVPGGSSSGSAVAVAHGIVAFALGTDTAGS 172
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
RVP+A ++G +PS GA+S G++P +LDT+ FA
Sbjct: 173 GRVPAALNNVVGLKPSLGAISSRGMLPACRTLDTLSVFA 211
>gi|86750696|ref|YP_487192.1| amidase [Rhodopseudomonas palustris HaA2]
gi|86573724|gb|ABD08281.1| Amidase [Rhodopseudomonas palustris HaA2]
Length = 449
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 178/405 (43%), Gaps = 39/405 (9%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFDI G VT G + A + V+ L G IG+T +
Sbjct: 67 APSPYAGIPVSIKDLFDIRGQVTRAGS-RALDDNPPAEDDAPAVARLRRAGFVVIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTNPAAP--SQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP + +PGGSSSGAAV+VA + LG DT G R+P
Sbjct: 126 TEFAYSGIGINPHYGTPKSAYGRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ---LPFAAQR 228
+AF GI+G++PS V G +P+S SLD++G AR + VL +P A
Sbjct: 186 AAFNGIVGYKPSQQRVPRDGAVPLSFSLDSIGPLARSVACCAVLDAVLADEEIVPLA--- 242
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFH 287
PR + L +P + + ++ F R + G + +VP
Sbjct: 243 -PRPLK-----GLRLAVPTTVALDELDEAVRLAFERALKALAGHGAIIEKIEVPEFNDVA 296
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSI 345
+ K + + Y + H I + DP + I GE ++ V + +
Sbjct: 297 PLSA--KGGLTAAESYAW---HRYLIVAQGDVYDPRVRERILRGESQSAADYV--DTITA 349
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC---- 401
R + + ++ L +V PTTA PP + L++D +AF+ ++ ++ C
Sbjct: 350 RKSLIARATTRLAPYDAVVMPTTANTPPAIAD---LADD---KAFTKANLLALRNCTLIN 403
Query: 402 ----CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +++P + P + +G DR + + + A L+
Sbjct: 404 MIDGCAISLPCHQDGEAPVGLMVAGVNGADRDVFEVAAGVEAVLR 448
>gi|330808987|ref|YP_004353449.1| amidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|327377095|gb|AEA68445.1| putative amidase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 458
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 173/392 (44%), Gaps = 14/392 (3%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A D+FD+ G T G R + A + VV L + G +GKT + EFA
Sbjct: 74 LDGVPVAWKDMFDVAGSPTTAGA-AVRRDITPALLDANVVGLLAKAGMVSVGKTNLSEFA 132
Query: 118 YSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N H+ TP NP Q +PGGSSSG+AVAVAA +V ++G DT G +R+P+AF
Sbjct: 133 YSGLGLNPHFGTPHNPVGLDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAFN 192
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G++GFR S S G+ P++ +LD+VG R + + +L + P +
Sbjct: 193 GLVGFRSSCRRYSREGVFPLAHTLDSVGPLTRSVRDALAIDDILCGRTKSTSLIPHSLAG 252
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
+ + RV V + VLK G D + PS F T ++
Sbjct: 253 RRFWVDQAVLDDARVEPAVRDNLLNCL--SVLKDH--GALIDLR-PS-PAFQATLQLIEQ 306
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
L F + LDP + + + + N S RN ++ ++
Sbjct: 307 QGWLGAPEAFALHQPLLDSDAATRLDPRVRRRLEAARAFPASQLINLHSARNRLQQQMTD 366
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI---ASVSGCCQVTVPLGYYD 412
L D L+TP+ A+ P L E E + + + L + S+ V++P G
Sbjct: 367 EL-DGAFLITPSVAHVAPPLSPLEADDELFVHTNLATLRLTMPGSLLDLPGVSLPSGRDA 425
Query: 413 -KCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
PTS+ A G D LL + A+L++
Sbjct: 426 LGLPTSMLISAPAGEDFRLLRAALAVEAALRQ 457
>gi|163853123|ref|YP_001641166.1| allophanate hydrolase [Methylobacterium extorquens PA1]
gi|163664728|gb|ABY32095.1| allophanate hydrolase [Methylobacterium extorquens PA1]
Length = 611
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 169/415 (40%), Gaps = 64/415 (15%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P++A T A T+ V L+ GA +GKT +D+F
Sbjct: 67 PLWGVPFAVKDNVDVAGLPTTAACPDFAYTPQA---TAPAVERLLAAGAILVGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P+ +PGGSSSG+AVAVA LV F+LG DT G RVP+
Sbjct: 124 ATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I+G +PS G+VS G++P +LDT+ FA + A
Sbjct: 184 IVGLKPSLGSVSGRGVVPACRTLDTLSVFA------------------------GTVTEA 219
Query: 237 DDCFELL-----KIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF----- 286
D F ++ + P R + V + G +V + G F S F
Sbjct: 220 DAVFRIMAGYDPQDPYSRALPVPPRPGALPPGLRVGVPDAAGLIFAGDALSASAFDGALA 279
Query: 287 --HKTNGELKNVMRL----------------IQRYE-FKNNHNEWIESVKPALDPDISAE 327
H G + L +RY+ + E E++ P ISA
Sbjct: 280 DLHTVTGAAATAVDLAPFFAVAGLLYAGPWVAERYQAIRGFMEERPEALHPTTRAIISAA 339
Query: 328 IGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN 387
G + + E+R A + + +LV PT YP P+ N
Sbjct: 340 TGHSAADAFAGLYRLA----ELRRATEPVWRGIDVLVVPT--YPRPRRVADLAADPVGPN 393
Query: 388 RAF-SLLSIASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
+ + ++ C + VP + D P+ V+ IA G D + + ++A+
Sbjct: 394 SELGTYTNFVNLLDLCALAVPGRFRADGLPSGVTLIAPRGADGLIAELGARLHAA 448
>gi|118470455|ref|YP_887305.1| amidohydrolase [Mycobacterium smegmatis str. MC2 155]
gi|118171742|gb|ABK72638.1| amidohydrolase, AtzE family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 447
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 174/386 (45%), Gaps = 39/386 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFG---HPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
L G+ AV DL D+ G+VT G HP A+ + V L GA +G+ V+
Sbjct: 82 LHGIPVAVKDLVDVAGHVTTRGSVVHP------GPATADAECVRRLRTAGAVIVGRNVLH 135
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+ G + NP PS++ GGSS G+AVA AA +V ++G DT G VRVP+A
Sbjct: 136 EFAFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVPAAL 195
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG++GF+P+YGA+ G+ P++ SLD VG FAR + R+ R
Sbjct: 196 CGVVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAGRSPDPVRAQRVAW 255
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+ C P D + + +E L Q+ +G F + GE+
Sbjct: 256 LDPACLG----PCDPAIIAAL--SETLRAAQITVDGTVGLPFAA------------GEVF 297
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET----VIENCKSIRNEMR 350
+ ++Q E ++ E +DP++ +G +L +T + C+ R+ +R
Sbjct: 298 EALSVLQSSEAYTEYSAETEQRASDIDPEV---LGRLLRGRDTPAWQYVRACRQ-RDRLR 353
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS-LLSIA---SVSGCCQVTV 406
+A +LL +L P ++ + + + S LLS+ +++G ++V
Sbjct: 354 AAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEVRSALLSLTCPWNLTGHPALSV 413
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLD 432
P G P + I+ G + L D
Sbjct: 414 PAGVVSGLPVGLQLISAPGNEGMLFD 439
>gi|328543589|ref|YP_004303698.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Polymorphum gilvum
SL003B-26A1]
gi|326413334|gb|ADZ70397.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Polymorphum gilvum
SL003B-26A1]
Length = 607
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P++ H A +TVV+ L GA +GKT +D+F
Sbjct: 87 PLWGVPFAVKDNIDVAGMPTTAACPDY-LYHPA--EDATVVARLKAAGAIVVGKTNLDQF 143
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P+ +PGGSSSG+AVAVA +V FSLG DT G RVP+A
Sbjct: 144 ATGLVGVRSPYPIPRNAVDPALVPGGSSSGSAVAVAQGIVTFSLGTDTAGSGRVPAALND 203
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +PS G++S G++P +LDTV FA
Sbjct: 204 LVGLKPSLGSLSATGVVPACRTLDTVSIFA 233
>gi|441208125|ref|ZP_20973851.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Mycobacterium smegmatis MKD8]
gi|440627599|gb|ELQ89407.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Mycobacterium smegmatis MKD8]
Length = 447
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 174/386 (45%), Gaps = 39/386 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFG---HPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
L G+ AV DL D+ G+VT G HP A+ + V L GA +G+ V+
Sbjct: 82 LHGIPVAVKDLVDVAGHVTTRGSVVHP------GPATADAECVRRLRTAGAVIVGRNVLH 135
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+ G + NP PS++ GGSS G+AVA AA +V ++G DT G VRVP+A
Sbjct: 136 EFAFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVPAAL 195
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG++GF+P+YGA+ G+ P++ SLD VG FAR + R+ R
Sbjct: 196 CGVVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAGRSPDPVRAQRVAW 255
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+ C P D + + +E L Q+ +G F + GE+
Sbjct: 256 LDPACLG----PCDPAIIAAL--SETLRAAQITVDGTVGLPFAA------------GEVF 297
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET----VIENCKSIRNEMR 350
+ ++Q E ++ E +DP++ +G +L +T + C+ R+ +R
Sbjct: 298 EALSVLQSSEAYTEYSAETEQRASDIDPEV---LGRLLRGRDTPAWQYVRACRQ-RDRLR 353
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS-LLSIA---SVSGCCQVTV 406
+A +LL +L P ++ + + + S LLS+ +++G ++V
Sbjct: 354 AAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEVRSALLSLTCPWNLTGHPALSV 413
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLD 432
P G P + I+ G + L D
Sbjct: 414 PAGVVSGLPVGLQLISAPGNEGMLFD 439
>gi|167033221|ref|YP_001668452.1| amidase [Pseudomonas putida GB-1]
gi|166859709|gb|ABY98116.1| Amidase [Pseudomonas putida GB-1]
Length = 379
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 177/392 (45%), Gaps = 45/392 (11%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+G A+ D D+ G T + A R + VVS L+ GA K + E A+
Sbjct: 15 SGPRVAIKDTIDVAGTAT-RASSQALEDAPLAVRHAEVVSHLLAAGARLTAKVGLHELAF 73
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
G N+H T NP P ++PGGSSSG+A AVAA LVDFSLG DT G VRVP+ CG+
Sbjct: 74 GTTGINRHTGTAANPRFPGRIPGGSSSGSAAAVAAGLVDFSLGTDTGGSVRVPACCCGVF 133
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARD-PKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G +P++G VS G++P S+SLD VG FA P ++R + ++ F + P + I
Sbjct: 134 GLKPTFGRVSRQGVMPASSSLDCVGPFAASLPMLVRAM--AMIDPTFVPAQVPAKARIG- 190
Query: 238 DCFELLKIPAD----RVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+L++ A+ + VQ + ++ G LKH G +++
Sbjct: 191 ----VLRVTAEVGIHKAVQGALSASGLPLGNVELKH--FGAAYEAG-------------- 230
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
M +I R F+ +E+ K + DI+ + + + + +++R +
Sbjct: 231 ---MVVINRETFQAC-GHLLETGK--VGSDIAGRLAAAGQTHDAALAEAEAVRQRFTEEV 284
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLG 409
L +L PT P + L E RA SL+ ++SG +++PLG
Sbjct: 285 DQALARYDVLALPTMPDFPLR------LEEASDTRAVLGMTSLVRPFNLSGHPALSIPLG 338
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
P + + G D LL + + +L
Sbjct: 339 SEAGLPVGLQLVGAKGADEKLLAVAERLLLNL 370
>gi|122919913|pdb|2DC0|A Chain A, Crystal Structure Of Amidase
gi|122919914|pdb|2DC0|B Chain B, Crystal Structure Of Amidase
Length = 434
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 162/385 (42%), Gaps = 43/385 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH-------PEWARTHSAASRTSTVVSTLVEGGATCIG 109
PL GL V DLF ++G T G PE AR V L E GA
Sbjct: 64 PLHGLPLTVKDLFPVKGMPTRAGTKAPLPPLPEEARA----------VRRLREAGALLFA 113
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KT E A I G N N PS+ GGSS G+AVAVA + SLG DT G +R
Sbjct: 114 KTNXHEIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIR 173
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL--QLPFAAQ 227
+P+ F G++GF+PSYG VS G +P+S S D G R + + +L +P
Sbjct: 174 IPAGFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGESIPLEGV 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGF 286
++P + +P D + + K F R + L E + +P L+G
Sbjct: 234 QNP-----------VFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-LEGV 281
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
++ RL+ RYE H + ++ P + + L ++E + + R
Sbjct: 282 YEV------YTRLV-RYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDAVAER 334
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ---NRAFSLLSIA-SVSGCC 402
+R + L+ L+ P P P LG +E+ E + AF L++ S+ G
Sbjct: 335 EALRLELVKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVP 394
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGD 427
+ +P + P + + +G D
Sbjct: 395 TLALPFAKVEGXPVGLQVVGAYGED 419
>gi|414167803|ref|ZP_11424007.1| hypothetical protein HMPREF9696_01862 [Afipia clevelandensis ATCC
49720]
gi|410887846|gb|EKS35650.1| hypothetical protein HMPREF9696_01862 [Afipia clevelandensis ATCC
49720]
Length = 432
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 173/381 (45%), Gaps = 20/381 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G + DLFD++G VT G A A + +V L E GA KT + EF
Sbjct: 54 PLDGAILTIKDLFDVKGEVTRAGSRVLASRGKPAEADAVIVQRLREAGAVIAAKTNMTEF 113
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS G N H+ TP NPA ++PGGSSSGAAVA A + ++G DT G R+P+AFCG
Sbjct: 114 AYSGLGANPHFGTPGNPADRRRVPGGSSSGAAVAAADAFCEIAIGTDTGGSTRIPAAFCG 173
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+P+ V G P+S +LD++G AR VL + SP +
Sbjct: 174 VTGFKPTVKRVPRAGAFPLSFTLDSIGPIARSVADCADADAVLAGETPSPLASPSLKDVR 233
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
+ P D + +V K+ + + + H G D + +L H N E V
Sbjct: 234 AGFVQ--GYPIDGLDDIVGKAYPQALAK-LAPHWKSGA--DVTLKALDIMHTAN-ERGGV 287
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR--SAIS 354
E H + +DP++ A + +IS + ++R+ R + +
Sbjct: 288 ----APPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKISAA--DYILALRDRERGIAQMD 341
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLS-EDYQNRAFSLL---SIASVSGCCQVTVPLGY 410
++ +LV PT P + E+ + E + R L SI + C +++P+ +
Sbjct: 342 AVFDQVDVLVMPTVQIVAPTM--DEISTPESFNKRNVQALMNTSIWNFFDVCAISLPIRF 399
Query: 411 YDKCPTSVSFIARHGGDRFLL 431
+ P + + RHG DR LL
Sbjct: 400 GNALPVGLMLVGRHGDDRRLL 420
>gi|332529378|ref|ZP_08405339.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041176|gb|EGI77541.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 452
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G T G R A + VV L+ GA +G+T + EF
Sbjct: 69 PLEGLPVSIKDLFDVAGETTLAGSVVL-RDAPPAQAHALVVQRLIAAGAVIMGRTNMTEF 127
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N HY TP NP A ++PGGS+SG AV+V+ + ++G DT G VR+PSA
Sbjct: 128 AYSGLGLNPHYGTPRNPWDRATGRIPGGSTSGGAVSVSDGMALAAIGSDTGGSVRIPSAL 187
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
CG+ GF+PS V G++P+S LD++G A
Sbjct: 188 CGLTGFKPSARRVPMDGVLPLSIQLDSIGPLA 219
>gi|399987321|ref|YP_006567670.1| amidase [Mycobacterium smegmatis str. MC2 155]
gi|399231882|gb|AFP39375.1| Amidase [Mycobacterium smegmatis str. MC2 155]
Length = 438
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 174/386 (45%), Gaps = 39/386 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFG---HPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
L G+ AV DL D+ G+VT G HP A+ + V L GA +G+ V+
Sbjct: 73 LHGIPVAVKDLVDVAGHVTTRGSVVHP------GPATADAECVRRLRTAGAVIVGRNVLH 126
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+ G + NP PS++ GGSS G+AVA AA +V ++G DT G VRVP+A
Sbjct: 127 EFAFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVPAAL 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG++GF+P+YGA+ G+ P++ SLD VG FAR + R+ R
Sbjct: 187 CGVVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAGRSPDPVRAQRVAW 246
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+ C P D + + +E L Q+ +G F + GE+
Sbjct: 247 LDPACLG----PCDPAIIAAL--SETLRAAQITVDGTVGLPFAA------------GEVF 288
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET----VIENCKSIRNEMR 350
+ ++Q E ++ E +DP++ +G +L +T + C+ R+ +R
Sbjct: 289 EALSVLQSSEAYTEYSAETEQRASDIDPEV---LGRLLRGRDTPAWQYVRACRQ-RDRLR 344
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGK----EMLSEDYQNRAFSLLSIASVSGCCQVTV 406
+A +LL +L P ++ + + + + ++ SL +++G ++V
Sbjct: 345 AAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEVRSALLSLTCPWNLTGHPALSV 404
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLLD 432
P G P + I+ G + L D
Sbjct: 405 PAGVVSGLPVGLQLISAPGNEGMLFD 430
>gi|294627516|ref|ZP_06706099.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
gi|292598147|gb|EFF42301.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
Length = 486
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 160/389 (41%), Gaps = 58/389 (14%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ F V DLFD+ G VT G R H ASR + VV L E GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAG--AAVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G RP++GAV G+ P +LD VG FA LR V VL P A + +
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRRVYDVLRGQPLPACHAGK----- 280
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKV-PSLKGFHKTNGELKN 295
L+ LG +F+ + P L+ +T N
Sbjct: 281 ------------------------------LRVARLGGWFERNLDPDLEAGLQTLLAACN 310
Query: 296 VMR---------------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIE 340
+ ++ E + H + + DP + L++ + +
Sbjct: 311 SLSSIDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVA 370
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS--- 397
+ A+ +L +L+ P T P++ + +D A + L I +
Sbjct: 371 DAHRFAQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDDLPVSARANLGIFTQPL 430
Query: 398 -VSGCCQVTVPLGYYDKCPTSVSFIARHG 425
++ C + PL + P V IA G
Sbjct: 431 GLAACPVLAAPLPRPGRLPLGVQLIAAPG 459
>gi|398833030|ref|ZP_10591174.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
gi|398222261|gb|EJN08642.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
Length = 450
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 168/395 (42%), Gaps = 22/395 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ G+ +V DLFD+ G T G R A+ + V L+ GA +GKT + EF
Sbjct: 68 PIDGIPVSVKDLFDVVGETTLAGSVVL-RGKPVATANAVAVQHLINAGAIVMGKTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNP----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
AYS G N HY TP N ++PGGSSSGAA++V + ++G DT G VR+PS
Sbjct: 127 AYSGLGINPHYGTPRNAWQRDVDGGRIPGGSSSGAAISVTDGMAAAAIGSDTGGSVRIPS 186
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A G+ GF+P+ VS G++P+ST LD++G A + V VL P+ R+P
Sbjct: 187 ALNGLTGFKPTASRVSMQGVLPLSTYLDSIGPLAASVECCAIVDAVLAGQPY---RAP-- 241
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE--YFDSKVPSLKGFHKTN 290
+A L + VV I T R L + + VP+L N
Sbjct: 242 --LAHPLRGLRLLAPTNVVLDGIDDTVAAAYRNALSALSAAGAVIVEQAVPALGELAAIN 299
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
K + Y + H + I D + + I ++ + + R
Sbjct: 300 A--KGGFTAAEAYAW---HRQLIAENHAGYDQRVVSRILRGRDMGAADLLDVIHARARWI 354
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG---CCQVTVP 407
+ + L LV PT P++ + E Y +L A++ C V++P
Sbjct: 355 ANTEAQLDGFDALVMPTVPIVAPRIADLQASDEAYYGANGLMLRNATLINFLDGCAVSLP 414
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
+ P +S A G DR LL + A L+
Sbjct: 415 CHAAGEAPVGLSLAAPAGHDRRLLSIASAVEALLR 449
>gi|402757984|ref|ZP_10860240.1| Glu-tRNA amidotransferase [Acinetobacter sp. NCTC 7422]
Length = 370
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 167/388 (43%), Gaps = 60/388 (15%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
L V D DI+G T G ++ AA+R + VV ++ KT + E A+
Sbjct: 14 ALKVMVKDSIDIQGMQTMAGSKALMQSQ-AATRNAAVVDRILAADCQITAKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
I G N + T NP P +PGGSSSG+A AVAA L DF+LG DT G +R+P+A CG+ G
Sbjct: 73 ITGINHVFGTAVNPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR----------HVGHVLLQLPFAAQRS 229
+P++G VS G+ P ++SLD VG FA ++ H L Q P A
Sbjct: 133 LKPTFGRVSRAGVHPATSSLDCVGPFANSIDMIETAMQIIDPTFHQSTELTQAPKLAWLD 192
Query: 230 PRQIIIADDCFELLKIPAD-RVVQVVIKSTEKLF--GRQVLKHENLGEYFDSKVPSLKGF 286
+ +C + AD + V +KS + F G Q++ +EN Y
Sbjct: 193 VQADSTVAECIQHYLAQADLHPIHVTVKSFDAAFDAGMQIINYENWQAY----------- 241
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
GEL L D++A + + + +E + ++
Sbjct: 242 ----GELTQTGL---------------------LGTDVNARLLKAAATTLAQVEQAEQVK 276
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCC 402
+ I +LL L+ PT PPK+ E L+ R F+L SG
Sbjct: 277 ASFTAEIDALLDQYDALILPTLPQLPPKVAEAENTVAFLNLTGLVRPFNL------SGHP 330
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFL 430
+++PL + P + +A+H D +L
Sbjct: 331 AISIPLQTNEGLPVGLQIVAKHNADEYL 358
>gi|424891426|ref|ZP_18315009.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393185421|gb|EJC85457.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 456
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDIEG T G A + A + VV L + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLA-GEAPARHDAAVVGLLRQAGMIAVGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP A ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGINPHYGTPVNPRGADLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G + G+ P++ SLD++G R
Sbjct: 191 GIVGYKATRGRHAMEGVYPLAKSLDSLGPLCR 222
>gi|46133813|ref|XP_389222.1| hypothetical protein FG09046.1 [Gibberella zeae PH-1]
Length = 669
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL GL + DLFD++G T FG W + T+ V L++ GA +GK + E
Sbjct: 181 QPLAGLRIGIKDLFDMKGVKTSFGSKAWYDMSKIKTETAIAVQKLIDAGAIIVGKNKLSE 240
Query: 116 FAYSINGTNKHYD--TPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVP 171
FA++ +H D P NP Q P SS G+A AVA+ D +D SLG DT G +R P
Sbjct: 241 FAFAGMFVTEHIDYLLPVNPRGDGYQSPSDSSGGSAAAVASYDWLDASLGSDTGGSIRGP 300
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
++ G+ G RP+ AV+ G +P+S S+DT G RDP++ + VL
Sbjct: 301 ASTNGVHGGRPTQDAVNLTGALPLSVSMDTAGILVRDPRMWARINKVL 348
>gi|398808504|ref|ZP_10567367.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
gi|398087536|gb|EJL78122.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
Length = 463
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL +V DL+D+ G T G A + A+ +T V+ L GA +GKT + EF
Sbjct: 70 PLAGLPVSVKDLYDVAGETTMAGSAVCA-GEAPAAHDATAVARLRAQGAAIVGKTNMTEF 128
Query: 117 AYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+S G N HY TP NPA ++PGGSSSGAAV+VA L LG DT G +R+P+A
Sbjct: 129 AFSGVGINPHYGTPRNPADAQTPRIPGGSSSGAAVSVALGLAVAGLGSDTGGSIRIPAAL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG++GF+ + V G ++ SLDTV AR
Sbjct: 189 CGLVGFKSTQSRVPRTGAFELARSLDTVCAMAR 221
>gi|296274229|ref|YP_003656860.1| allophanate hydrolase [Arcobacter nitrofigilis DSM 7299]
gi|296098403|gb|ADG94353.1| allophanate hydrolase [Arcobacter nitrofigilis DSM 7299]
Length = 598
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V D D+EG T P + A + +V L + GA CIGKT +D+F
Sbjct: 67 PLWGIPFTVKDNIDVEGIPTTAACPAY---EYIAKEDAFIVKVLKQAGAICIGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N +PGGSS G+AVAV+ L FSLG DT G R+P+A
Sbjct: 124 ATGLVGIRTPYGAPKNALDEKIIPGGSSCGSAVAVSHQLFSFSLGTDTAGSGRIPAALNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +P+ GA S G++P ++DTV FA
Sbjct: 184 LVGLKPTLGAFSKRGVVPACLTVDTVSVFA 213
>gi|300705048|ref|YP_003746651.1| glutamyl-tRNA amidotransferase/amidase (gata) [Ralstonia
solanacearum CFBP2957]
gi|299072712|emb|CBJ44065.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum CFBP2957]
Length = 448
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 177/403 (43%), Gaps = 39/403 (9%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G V+ G A A+ + V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVSAAGSRALAH-QPPATADAVAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+P+AF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-------QLPFAAQ 227
C + GF+P+ V G +P+STSLD+ G A V VL +P A
Sbjct: 189 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGL 248
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE---YFDSKVPSLK 284
R L + D V + + F R V++ E G FD P L
Sbjct: 249 R--------------LGLTRDYVGADLDDTVATAFQRAVMRLEQAGARIVRFD--FPELL 292
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS 344
+ NG + + + + H + + D ++A I +++ + +
Sbjct: 293 QLPEING--GGGLPAAESWAWHRPH---LARAEAQYDRRVAARIRRGEQMTAAAYLDVMA 347
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLL----SIASVS 399
R M +A L + + PT A PP++ E ++D Q R +L+ S+ +
Sbjct: 348 ARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLE--ADDTQFFRTNALVLRNPSVINFL 405
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +T+P+ + P +S D +L + + A+L+
Sbjct: 406 DGCALTLPIHGAGELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|408393181|gb|EKJ72447.1| hypothetical protein FPSE_07328 [Fusarium pseudograminearum CS3096]
Length = 649
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL GL + DLFD++G T FG+ W + T+ V L++ GA +GK + E
Sbjct: 170 QPLAGLRIGIKDLFDMKGVKTSFGNKAWYDMSKVKTETAIAVQKLIDAGAVIVGKNKLSE 229
Query: 116 FAYSINGTNKHYD--TPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVP 171
FA++ +H D P NP Q P SS G+A AVA+ D +D SLG DT G +R P
Sbjct: 230 FAFAGMFVTEHIDYLLPVNPRGDGYQSPSDSSGGSAAAVASYDWLDASLGSDTGGSIRGP 289
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
++ G+ G RP+ AV+ G +P+S S+DT G RDP++ + VL
Sbjct: 290 ASTNGVHGGRPTQDAVNLTGALPLSVSMDTAGIIVRDPRMWARINKVL 337
>gi|399909744|ref|ZP_10778296.1| amidase [Halomonas sp. KM-1]
Length = 390
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 164/367 (44%), Gaps = 35/367 (9%)
Query: 65 VSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTN 124
V D DI GY T G A A R + +V + G +GK + E A+ + G N
Sbjct: 19 VKDSIDIAGYPTRAGSAALAGV-PAVERHAEIVERTLAAGYRIVGKANLHELAFGMTGLN 77
Query: 125 KHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSY 184
TP NP P+ +PGGSSSG+A AVAA L + +G DT G +RVP+A CG+ G +P++
Sbjct: 78 AWTGTPENPRFPALIPGGSSSGSATAVAAGLAEIGIGTDTGGSIRVPAACCGVYGLKPTF 137
Query: 185 GAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLK 244
G + G++P +SLD VG + D L + FA + C+ L+
Sbjct: 138 GRLGRRGVMPAHSSLDCVGPLSADLDELIAF-MTAVDAGFAVGEG---AAMPSLCW--LE 191
Query: 245 IPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYE 304
+ AD + +++ L G + +++ D + M LI R
Sbjct: 192 VSADSAILAAVEAC--LVGAGLAGKKSVLPLMDEA-------------YQAAMALINRET 236
Query: 305 FKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILV 364
+ W++S + L D+ + E ++ + +++R +++ LL+ +L
Sbjct: 237 YAAC-AAWLDSGR--LGCDVERRLRAAAETTDAELREAEAVRLAFTASVDRLLETYEVLA 293
Query: 365 TPTTA-YPPPKLG---GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSF 420
PT +P ++ G++ LS R F+L SG +++PL P S+
Sbjct: 294 LPTLPHFPLTRVAAEEGRQDLSVSSLVRPFNL------SGHPALSLPLPPSRGRPVSLQL 347
Query: 421 IARHGGD 427
I R G D
Sbjct: 348 IGRRGDD 354
>gi|241518431|ref|YP_002979059.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862844|gb|ACS60508.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 447
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G+ AV DL DI G VT G E R + A + VVS++ G IGKT + EFA+S
Sbjct: 66 GVPIAVKDLLDIAGTVTTAGS-EIRRNLAPAREDAEVVSSIHGVGLISIGKTNLSEFAFS 124
Query: 120 INGTNKHYDTPTNPAAPSQ-MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
G N H+ TP AP Q +PGGSSSG+A+AV +V ++G DT G +RVP+AF G+
Sbjct: 125 GLGINPHFGTPIPGYAPEQRVPGGSSSGSAIAVERGVVLAAIGSDTAGSIRVPAAFNGLH 184
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GFRPS G G+ P+++S DT+G AR
Sbjct: 185 GFRPSTGRYPMRGVHPLASSFDTLGPIAR 213
>gi|121604659|ref|YP_981988.1| amidase [Polaromonas naphthalenivorans CJ2]
gi|120593628|gb|ABM37067.1| Amidase [Polaromonas naphthalenivorans CJ2]
Length = 450
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Query: 46 PPQPLPPKAPHP---LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVE 102
P PL + P LTG+ +V DLFD+ G VT G A + AS + V+ L
Sbjct: 55 PALPLKAASNDPAFALTGIPVSVKDLFDVAGQVTTAGSTVLAGA-APASTDAVAVARLRA 113
Query: 103 GGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSL 160
GA +G++ + EFA+S G N HY TP NPA S ++PGGSSSGAAV+VA L
Sbjct: 114 AGAVLVGRSNMVEFAFSGVGINPHYGTPVNPADASIERIPGGSSSGAAVSVATGAALVGL 173
Query: 161 GIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G DT G +R+P+A CGI+GF+ + V G +P+STSLDTV R
Sbjct: 174 GSDTGGSIRIPAALCGIVGFKSTARLVPATGAVPLSTSLDTVCAVTR 220
>gi|338730589|ref|YP_004659981.1| amidase [Thermotoga thermarum DSM 5069]
gi|335364940|gb|AEH50885.1| Amidase [Thermotoga thermarum DSM 5069]
Length = 452
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 36/381 (9%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL G+ AV DL D++G T G + + A + VV L + GA +GKT + E
Sbjct: 74 QPLLGIPIAVKDLIDVKGVPTTAGSLFF--KENIAKEDAFVVKLLRKAGAIIVGKTNLHE 131
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A + N H+ NP S++ GGSS G+AVAVA + +LG DT G +R+P+A C
Sbjct: 132 IALGVTNNNPHFGPCRNPYDKSKISGGSSGGSAVAVATGMALAALGTDTGGSIRIPAALC 191
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVG-----------WFARDPKILRHVGHVLLQLPF 224
G++G +P+YG VS G+IP++ LD VG F K R+ + + ++ +
Sbjct: 192 GVVGLKPTYGVVSTSGVIPLAWHLDHVGPITSSVEDAHLIFRITRKYDRNNPYSVTRV-Y 250
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVV---IKSTEKLFGRQVLKHENLGEYFDSKVP 281
+R+ ++ +A E ++ R++++V KS EK+ G V + K+
Sbjct: 251 KVKRNLSRLRVAVAVGEYIEEADQRILELVRDIAKSLEKM-GFSVEQ---------KKLD 300
Query: 282 SLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
LK N L+ + E H E + D+ + + L S T
Sbjct: 301 WLKDLAAAN-------VLMTQVEAATFHKERLLKNPEMFGSDVRERLMQGLNTSGTDYAL 353
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC 401
+ + E + K+ +++ PTT P + G+ ++ + F+ + ++SG
Sbjct: 354 ARKTQTEAKHIFREFFKEYDLILLPTTPITAPPIEGENAVAMARKLTRFT--APFNISGL 411
Query: 402 CQVTVPLGYYDKCPTSVSFIA 422
+TVP+G+ D P V +A
Sbjct: 412 PALTVPVGFVDGLPAGVQLVA 432
>gi|86360596|ref|YP_472484.1| hypothetical protein RHE_PE00322 [Rhizobium etli CFN 42]
gi|86284698|gb|ABC93757.1| probable glutamyl-tRNA amidotransferase subunit A protein
[Rhizobium etli CFN 42]
Length = 456
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDIEG T G A T + AS + +V L G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLAAT-APASCDAAIVGLLRRAGMVAIGRTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP ++PGGSSSGA VAVAA LV ++G DT G VR+P+AF
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G G+ P++ SLD++G R
Sbjct: 191 GIVGYKATSGRHVMDGVYPLAKSLDSLGPLCR 222
>gi|424069061|ref|ZP_17806509.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407995652|gb|EKG36171.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 457
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 182/421 (43%), Gaps = 60/421 (14%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGAT 106
QPL P G+ A DLFD+ G VT G RT+ S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAG--AAVRTNLSPALLDAPSVGLLARSGMV 120
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDT 164
+GKT + EFAYS G N H+ TP NP + S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 121 SLGKTNLSEFAYSGLGLNPHFGTPINPGSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDT 180
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 181 AGSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------ 222
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 ---RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAV 278
Query: 285 GFHKTNGELKNV--MRLIQRYEFKNNHNEWIESVKP--------------ALDPDISAEI 328
+ +G L V + Q W+ + + LDP + +
Sbjct: 279 EALRASGALIEVKPCQAFQATLLLTQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRL 338
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED---- 384
+ +++ N + R ++ + +L D +L+TPT A+ P L +L +D
Sbjct: 339 EAARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLA--PLLKDDDLFV 395
Query: 385 YQNRAFSLLSI-ASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLD---TVQNMYA 439
N A L++ S+ V++P G PT + A G D LL TV+++ A
Sbjct: 396 QTNLATLRLTMPGSLLNMPGVSLPSGRDASGLPTGLLLSAPAGEDARLLRAALTVESLIA 455
Query: 440 S 440
+
Sbjct: 456 A 456
>gi|430746988|ref|YP_007206117.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Singulisphaera acidiphila DSM 18658]
gi|430018708|gb|AGA30422.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Singulisphaera acidiphila DSM 18658]
Length = 497
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL A+ D+ + G T G +TV++ L GA GKT +DEF
Sbjct: 69 PLGGLPVAIKDVLCVNGEPTTCGSRMLENFRPPYD--ATVIARLKSAGAILFGKTNMDEF 126
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N Y NP ++PGGSS G+AVA+AADL SLG DT G +R P+A CG
Sbjct: 127 AMGSSTENSAYGPTRNPWDEERIPGGSSGGSAVAIAADLAPLSLGTDTGGSIRQPAALCG 186
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
++G +P+YG VS G+I ++SLD VG FA D
Sbjct: 187 VVGLKPTYGRVSRYGLIAYASSLDQVGPFAHD 218
>gi|192289986|ref|YP_001990591.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
gi|192283735|gb|ACF00116.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
Length = 607
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ T P +A T S T+ V L++ GA IGKT +D+F
Sbjct: 70 PLWGIPFAVKDNIDVACLPTTAACPGFASTPS---ETAFAVQRLLDAGAVLIGKTNLDQF 126
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P +PGGSSSG+AVAVA LV F+LG DT G RVP+A
Sbjct: 127 ATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVAVAHGLVTFALGTDTAGSGRVPAALNN 186
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G+VS G++P +LDT+ FA
Sbjct: 187 IVGLKPSLGSVSSRGMVPACRTLDTISVFA 216
>gi|3618277|emb|CAA11194.1| hypothetical protein [Sphingomonas sp.]
Length = 452
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 173/403 (42%), Gaps = 43/403 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G +V + D++G +T G R A+ S+VVS L GA +G T + EFA
Sbjct: 58 LDGALVSVKAMLDVQGLLTDAGSATL-RGRPPAASDSSVVSRLRSAGAVVVGTTQMTEFA 116
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+S GTN ++ NP ++ GGSSSGAAV+V L D ++G DT G +R+P+A CG+
Sbjct: 117 FSAVGTNPNFPALGNPHDAERICGGSSSGAAVSVGGGLADIAIGSDTGGSLRIPAALCGL 176
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
+GF+P+ V G P+S +LD++G AR K+ VL
Sbjct: 177 VGFKPTASRVPAAGSFPLSQTLDSIGPIARSVKLCALADSVLAT---------------G 221
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK--GFHKTNGELKN 295
++ I DR VV + +LF + L + FD + L+ ++G L+
Sbjct: 222 KASDVAAIGVDRFRLVVARG--RLF--EGCDQAVL-DAFDGAIDHLRRSDVRISDGSLEP 276
Query: 296 VMRLIQRYEFKNN----------HNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
++ + R + + I + P +DP+ + I +S +
Sbjct: 277 ILDELARIDGLGTFPPVELAATLRSSGITDLAP-VDPNTRSRIEAGSGLSAVDYLEMARL 335
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSG 400
R ++ ++D + V PT P +S+ Q R + L +A++
Sbjct: 336 RRQLADGFERSMEDGEVYVVPTVPIVAPT---TWSVSDPEQFRRINALLLRNPRVANLLD 392
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
C +++PL P + I R DR LL + L +
Sbjct: 393 CPSISIPLPSR-GLPVGMMLIGRRNADRHLLSIALRLEGILAQ 434
>gi|166365160|ref|YP_001657433.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis
aeruginosa NIES-843]
gi|166087533|dbj|BAG02241.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis
aeruginosa NIES-843]
Length = 438
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 156/328 (47%), Gaps = 26/328 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDIEG VT G + R H A + + + TL GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 127 YGFVTENAHYGATANPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQRSPRQI 233
+G +P++G VS G+ +SLD +G+F+ + + + + L+ P + I
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWGLFAKNNLKAPLNGLEGVK-I 245
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+ADD F+ P V++ VI E+L V K + E ++ +
Sbjct: 246 ALADDYFQQGAEP--EVIESVIAIAERL---GVTKKITIPETVRARAAAY---------- 290
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+I E N H +++ DP I + + R R +
Sbjct: 291 -----IITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQRFRRWYRDRL 345
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEML 381
+ + I++TPT P LG ++M+
Sbjct: 346 REIFSEVDIILTPTIPCIAPPLGVEKMI 373
>gi|344300777|gb|EGW31098.1| hypothetical protein SPAPADRAFT_63024 [Spathaspora passalidarum
NRRL Y-27907]
Length = 459
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 188/385 (48%), Gaps = 48/385 (12%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQ-MPGGSSSGAAVAVA 152
+TVVS L + G+ IGK+ +DEF + TN H+ NP P Q +PGGSS G+A AVA
Sbjct: 81 ATVVSLLAQAGSKLIGKSNLDEFGMGSSNTNSHFGPTMNPVYPDQRVPGGSSGGSAAAVA 140
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
A L DFSLG DT G VR+P+++C ++GF+PSYG +S G++P + +LDTVG ++ ++
Sbjct: 141 AGLADFSLGTDTGGSVRLPASYCSVIGFKPSYGRISRWGVVPYAQTLDTVGIISKSLNVV 200
Query: 213 RHVGHVL----LQLPFAAQRSPRQIIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVL 267
R V VL + P + ++ R C +L + IP++ V+ + T + + +
Sbjct: 201 RKVFSVLDVYDEKDPTSLPQNIRNEFKPSTCKQLTVGIPSEFVLDELSPETRAAWSQALT 260
Query: 268 KHENLGE-----YFDSKVPSLKGFHK--TNGELKNVMRLIQ-RYEFKNNH-------NEW 312
K + G S SL ++ T N+ R RY + NN+ N
Sbjct: 261 KLQEAGHNIKPISIKSITKSLPAYYTLATAEAASNLSRYDGVRYGYNNNNQHTKDAMNLI 320
Query: 313 IESVKPALDPDISAEI--GEMLEISETVIENCKS--IRNEMRSAISSLLK---------- 358
+ + +L P++ I G S++ K+ +R E+ SSL K
Sbjct: 321 VSNRSESLGPEVQRRIILGNYTLSSDSGDHYLKATKVRQELVEEFSSLFKTKHALVETAS 380
Query: 359 -DDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS----LLSI-ASVSGCCQVTVPLGYYD 412
D ++++PT+ P + +E L+ D N S +L++ AS++G +++P G
Sbjct: 381 GDCDLMISPTSIGEAPTV--EEFLNADNANFLNSYVNDILTVPASLAGIPAISIPFGKL- 437
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNM 437
+ + + G D +L + +
Sbjct: 438 ----GIQLMGQFGDDELVLQVAETL 458
>gi|424875055|ref|ZP_18298717.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393170756|gb|EJC70803.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 483
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDIEG T G A+ A + VV+ L + G +G+T + EFA
Sbjct: 99 LDGIPIAWKDLFDIEGLPTTAGSVVLAKEMPAKC-DAAVVALLRQAGMVAVGRTNMSEFA 157
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP ++PGGSSSGA V VAA LV ++G DT G VR+P+AF
Sbjct: 158 FSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAFN 217
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ + G + G+ P++ SLD++G R
Sbjct: 218 GIVGYKATRGRHAMAGVYPLAKSLDSLGPLCR 249
>gi|390991028|ref|ZP_10261303.1| amidohydrolase, AtzE family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372554288|emb|CCF68278.1| amidohydrolase, AtzE family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 486
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ F V DLFD+ G VT G R H A ASR + VV L E GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAG--AAVRAHCAPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
I G RP++GAV G+ P +LD VG FA LR V VL P
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCVYDVLRGQPL 273
>gi|75676462|ref|YP_318883.1| amidase [Nitrobacter winogradskyi Nb-255]
gi|74421332|gb|ABA05531.1| amidase [Nitrobacter winogradskyi Nb-255]
Length = 449
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 175/393 (44%), Gaps = 35/393 (8%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFD+ G V+ G + A++ + VV+ L G IG+T +
Sbjct: 67 APSPYAGIPVSIKDLFDVRGQVSRAGSLAL-KDAPPAAKDAPVVARLRRAGFVVIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP N +PGGSSSGAAV++ + +LG DT G R+P
Sbjct: 126 TEFAYSGLGINPHYGTPKNGWRRDVGHVPGGSSSGAAVSITDGMAHGALGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A+CGI+G++P+ + G +P+S +LD+ G AR + VL P A +PR
Sbjct: 186 AAYCGIVGYKPTARRIPLDGGVPLSVTLDSYGPIARSVGCCAVLDAVLADEPVTAV-APR 244
Query: 232 QIIIADDCFELLKIPADRVVQV--VIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
+ L+ A V + + + F R + + G D VP
Sbjct: 245 PV-------RGLRFAAPTTVMLDRLDPAVASAFERALDLLADAGALIDHIAVPEF----- 292
Query: 289 TNGELK--NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKS 344
GE+ N+ E H I DP + + I GE L ++ V + S
Sbjct: 293 --GEVAELNIGGGFAAAESWAWHRALIAEKAELYDPRVLSRIRYGEGLSAADYV--DLLS 348
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVS----- 399
+R + + + L++PT A PP++ L++D ++LS+ + S
Sbjct: 349 VRRAIIGSFGRRVAPYDGLLSPTVAITPPRIAD---LADDAAYVKANMLSLRNCSLINIL 405
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
C +++P + P + G DR + +
Sbjct: 406 DGCAISLPCHRESEPPVGLMLAGTGGADRRIFE 438
>gi|421807819|ref|ZP_16243677.1| amidase [Acinetobacter baumannii OIFC035]
gi|410416390|gb|EKP68164.1| amidase [Acinetobacter baumannii OIFC035]
Length = 369
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 179/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTLTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K +R ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAATTLEQVKQAEVVRTQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|220936247|ref|YP_002515146.1| allophanate hydrolase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219997557|gb|ACL74159.1| allophanate hydrolase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 614
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 187/417 (44%), Gaps = 53/417 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWART--HSAASRTSTVVSTLVEGGATCIGKTVVD 114
PL G+ FA+ D D+ G T P +A T HSA VV L+E GA IGKT +D
Sbjct: 69 PLYGIPFAIKDNIDLAGVPTTAACPAFAYTPEHSA-----FVVERLIEAGALPIGKTNLD 123
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
+FA + GT Y N P+ + GGSS+G+AV VA +V FSLG DT G RVP+AF
Sbjct: 124 QFATGLVGTRSPYGACANAFDPAYISGGSSAGSAVTVATGVVSFSLGTDTAGSGRVPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD-PKILRHVGHVLLQLPFAAQRSPRQI 233
++G +P+ G +S G++P SLDTV FA P R + A PR +
Sbjct: 184 NNLIGVKPTRGLLSASGVVPACRSLDTVSIFALTVPDAERVLAVTAAFDAHDAYARPRPL 243
Query: 234 IIA--DDCFELLKIPADRVVQVVIKS-TEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
D +P +Q + E+LF V + ++LG ++V
Sbjct: 244 TTHGFDPARFRFGVPRAEQLQFFGNAEAERLFHEAVARLQSLG---GTRV------EIDF 294
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR---- 346
+ RL+ YE W+ A P I GE+L ++ +I + R
Sbjct: 295 APFLDAARLL--YE-----GPWVTERYLATQPLIDEAPGELLAVTRGIIGGGAAPRATDC 347
Query: 347 --------NEMRSAISSLLKDDGILVTPT--TAYPPPKLGGKEM-LSED--YQNRAFSLL 393
+ R A ++ D +LVTPT T Y ++ + L+ + Y +LL
Sbjct: 348 FRAQYRLMDYKRQAEAAWQAVD-VLVTPTAGTIYTIAQVNADPVRLNSNLGYYTNFMNLL 406
Query: 394 SIASVSGCCQVTVPLGYY-DKCPTSVSFIARHGGDRFLLDTVQNM-YASLQEQADIA 448
+AS++ VP G+ D P ++ IA GD LL + +AS++ Q A
Sbjct: 407 DLASLA------VPAGFQADGLPFGITLIAPAFGDGALLPLGERFQHASVETQGATA 457
>gi|121602953|ref|YP_980282.1| allophanate hydrolase [Polaromonas naphthalenivorans CJ2]
gi|120591922|gb|ABM35361.1| Ankyrin [Polaromonas naphthalenivorans CJ2]
Length = 600
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FA+ D D+ G T G P++A T A ++TVV L++ GA IGKT +D+F
Sbjct: 68 PLWGIPFAIKDNIDLAGVPTTAGCPDYAYTPEA---SATVVQRLLDAGAIAIGKTNLDQF 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A +NGT Y N P + GGSS+G+AV+VA FSLG DT G RVP+ F
Sbjct: 125 ATGLNGTRSPYGACRNAFNPDYVSGGSSAGSAVSVALGHASFSLGTDTAGSGRVPAGFNH 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +PS G +S G++P SLD V FA
Sbjct: 185 LVGLKPSLGLLSTQGVVPACRSLDVVSIFA 214
>gi|445443617|ref|ZP_21442642.1| amidase [Acinetobacter baumannii WC-A-92]
gi|444762562|gb|ELW86923.1| amidase [Acinetobacter baumannii WC-A-92]
Length = 369
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT P K +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPLK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + F+++H D +F +D +Q
Sbjct: 338 SEGLPVGLQFVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|395500572|ref|ZP_10432151.1| hypothetical protein PPAM2_30997 [Pseudomonas sp. PAMC 25886]
Length = 447
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 53 KAPHPLT---GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+A PL+ G+ A DLFD+ G +T G R AA + V L G +G
Sbjct: 56 RAGQPLSVFDGVPLAWKDLFDVAGSITTAGAAH-RRDAPAALLDAPSVGLLCRAGMVSVG 114
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
KT + E AYS G N H+ TP NP+ Q +PGGSSSG+AVAVAAD+V ++G DT G
Sbjct: 115 KTNLSELAYSGLGLNPHFGTPHNPSGIDQPRIPGGSSSGSAVAVAADIVPIAMGTDTAGS 174
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+R+P+A G++G+R S S G+ P++ +LD++G R +R + L Q
Sbjct: 175 IRIPAALNGVVGYRSSCRRYSRDGVFPLAHTLDSLGPLTRS---VRDALAIDDLLNGRDQ 231
Query: 228 RSPRQ 232
R PRQ
Sbjct: 232 RQPRQ 236
>gi|424073501|ref|ZP_17810917.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407995981|gb|EKG36480.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 457
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 150/347 (43%), Gaps = 49/347 (14%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTH-SAASRTSTVVSTLVEGGAT 106
QPL P G+ A DLFD+ G VT G RT+ S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAG--AAVRTNLSPALLDAPSVGLLARSGMV 120
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDT 164
+GKT + EFAYS G N H+ TP NP + S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 121 SLGKTNLSEFAYSGLGLNPHFGTPINPGSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDT 180
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 181 AGSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------ 222
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 ---RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAV 278
Query: 285 GFHKTNGELKNV--MRLIQRYEFKNNHNEWIESVKP--------------ALDPDISAEI 328
+ G L V + Q W+ + + LDP + +
Sbjct: 279 EALRAGGALIEVKPCQAFQATLLLTQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRL 338
Query: 329 GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL 375
+ +++ N + R ++ + +L D +L+TPT A+ P L
Sbjct: 339 EAARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPL 384
>gi|393765714|ref|ZP_10354275.1| amidase [Methylobacterium sp. GXF4]
gi|392728950|gb|EIZ86254.1| amidase [Methylobacterium sp. GXF4]
Length = 463
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ + DL D+EG +T G A A RT+T+ L+ G +GKT EF
Sbjct: 73 PLHGVPVVLKDLIDLEGRITMGGSA--AHRARRAERTATIARRLIAQGMIVLGKTHTVEF 130
Query: 117 AYSINGTNKHYDTPTNPAAP--SQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY GTN+H TP NP P + PGGSSSG VAVAA + + +G DT G VR+P++F
Sbjct: 131 AYGGWGTNQHLGTPWNPWDPETQRTPGGSSSGTGVAVAARMAPWGIGTDTGGSVRLPASF 190
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG+ G + + G VS GI+P+ST+LDT G AR
Sbjct: 191 CGLTGLKVTVGRVSTWGIVPLSTTLDTPGPLAR 223
>gi|395652363|ref|ZP_10440213.1| enantiomer-selective amidase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 450
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 185/389 (47%), Gaps = 40/389 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ D D +VT +G +A + V L E GA +GKT+ EF
Sbjct: 79 PLQGIPVAIKDNIDTFDHVTTYGSAHFAGCKP--EHDAVCVQRLREAGAVIVGKTLTHEF 136
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G NP + + GGSS+G+A AVA+ +V +LG DT G +R+P+A CG
Sbjct: 137 AYGPTGDRSLQGAARNPWDATCITGGSSAGSAAAVASGMVPLALGTDTGGSIRIPAALCG 196
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI--- 233
++GF+PS+ +V G+ P+++SLD VG A + R + V+ AA R +
Sbjct: 197 VVGFKPSFASVPLEGVFPLASSLDHVGPLANHIEDARLLFEVIAGRRCAASTQARPLRVG 256
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
IA F + D V ++ ++LFG + + L + E+
Sbjct: 257 WIASGSFGAVDAELD---SQVYQAAQQLFGEGLQTVDELA--------------LLSAEM 299
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV----IENCKSIRNEM 349
K ++++QR E N H E +++ P L D E+ E LE+S V +S + +
Sbjct: 300 KATLQVLQRAEAFNVHAERMQNA-PQLFED---EVRERLELSGEVRGWQYIRAQSGQARL 355
Query: 350 RSAISSLLKDDGILVTPT---TAYPPP----KLGGKEMLSEDYQNRAFSLLSIASVSGCC 402
++AI+ + + +LV+P+ TA P ++G ++M D + S S +++G
Sbjct: 356 KAAIAQIFQRYDLLVSPSVPITATPVDARVVQIGAQDM---DVRAALLSHTSAWNLTGLP 412
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++P+G P + I G D LL
Sbjct: 413 AISLPVGLVRGMPVGLQVIGAAGEDDRLL 441
>gi|294667814|ref|ZP_06733024.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
gi|292602440|gb|EFF45881.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
Length = 469
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 95/170 (55%), Gaps = 3/170 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ F V DLFD+ G VT G R H ASR + VV L E GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAG--AAVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA 226
I G RP++GAV G+ P +LD VG FA LR V VL P A
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRRVYDVLRGQPLPA 275
>gi|424878940|ref|ZP_18302575.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392519611|gb|EIW44342.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 447
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G+ AV DL DI G VT G E R A + VVS++ G IGKT + EFA+S
Sbjct: 66 GVPIAVKDLLDIAGTVTTAGS-EIRRNLPPAREDAEVVSSIHGVGLISIGKTNLSEFAFS 124
Query: 120 INGTNKHYDTPTNPAAPSQ-MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
G N H+ TP AP Q +PGGSSSG+A+AV +V ++G DT G +RVP+AF G+
Sbjct: 125 GLGINPHFGTPIPGYAPEQRVPGGSSSGSAIAVERGVVLAAIGSDTAGSIRVPAAFNGLH 184
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GFRPS G G+ P+++S DT+G AR
Sbjct: 185 GFRPSTGRYPMRGVHPLASSFDTLGPIAR 213
>gi|424744663|ref|ZP_18172952.1| amidase [Acinetobacter baumannii WC-141]
gi|422942707|gb|EKU37744.1| amidase [Acinetobacter baumannii WC-141]
Length = 369
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 181/392 (46%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ I KT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEP-AQNDAEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPTEFTSAPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + A+ V+ I QVL+ NL + KV + + ++ N
Sbjct: 187 -LAVLDVKAEDVIWNCI--------HQVLQKANL-QTTSEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ G +L+ +ET +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNGRLLKAAETTLEQVKQAEVVKAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPVISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|220923651|ref|YP_002498953.1| amidase [Methylobacterium nodulans ORS 2060]
gi|219948258|gb|ACL58650.1| Amidase [Methylobacterium nodulans ORS 2060]
Length = 427
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 179/396 (45%), Gaps = 31/396 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ ++ DLFD+ G T G R A++ + VV+ L GA IGKT + EF
Sbjct: 51 PLDGVIVSIKDLFDVAGEPTTAGS-AIRRKAVPAAQDAPVVARLRRAGAVIIGKTNMSEF 109
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N H+ TP N A P+++PGGSSSGA V+VA D ++G DT G +R+P+A G
Sbjct: 110 AFSGLGLNPHWGTPGNAADPTRIPGGSSSGAGVSVALGTSDIAIGTDTGGSIRIPAALNG 169
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ V G P+S SLD++G AR + VL F R + +
Sbjct: 170 VVGFKPTARRVPLAGAFPLSPSLDSIGPLARSVQACADADTVLSGEEFGPL---RPVALR 226
Query: 237 DDCFELLKIPADRVV------QVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
D L++ R + +V ++ E GR + + + + +
Sbjct: 227 D-----LRVGVPRGLLFTETDPMVAQAFEAALGRLGTESVRISDIALDDLLARMAEATAA 281
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
+ +V E H +WI++ + A DP + A I ++ R E+
Sbjct: 282 APVASV-------EAAEIHADWIDAEEAAFDPRVHARISRGRTVTAGTYIRMMRARAELI 334
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSGCCQVT 405
A L +L P TA P + ++ED +LL + ++ V+
Sbjct: 335 RACDDRLAGIDLLALPATAIPAVPIAA---MAEDEAFTRTNLLMLRNTMVGNLFDLTGVS 391
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASL 441
+PL P + +ARHG DR LL+ + A L
Sbjct: 392 LPL-PGQALPVGLMLLARHGQDRRLLEIAAAVEARL 426
>gi|242761675|ref|XP_002340226.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Talaromyces
stipitatus ATCC 10500]
gi|218723422|gb|EED22839.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Talaromyces
stipitatus ATCC 10500]
Length = 653
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 172/422 (40%), Gaps = 53/422 (12%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL G+ AV D+FDIEG T G W + A+ TS VV+ L+E GA +GK +
Sbjct: 222 QPLAGVRLAVKDIFDIEGIRTSAGSRAWYYFYPPANTTSPVVNALIEAGAVVVGKVKTSQ 281
Query: 116 FAYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVP 171
FA T Y +P NP Q P SS+GA V VA+ D +D +LG DT G +R P
Sbjct: 282 FANGQLATADWIDYHSPFNPRGDGYQQPFSSSTGAGVGVASYDWLDLALGTDTGGSIRFP 341
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-QLPFAAQRSP 230
S G+ G R S+GA ++P++ DT G ARDP + R V+ F P
Sbjct: 342 SQSNGVFGIRASHGAALLENVVPLAPQFDTAGLIARDPTVWRIASQVIYSNTTFDWSAYP 401
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVL---------------KHENLGEY 275
R+I L P D +V ++ + + NL E
Sbjct: 402 RKIQTIISKPLDLSDPIDSMVDKFLEELSEHLPASLTYLDVPSLWTETHPSNMSSNLTEA 461
Query: 276 FDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEIS 335
+ P++ G E ++R ++K H+ +P ++P G +
Sbjct: 462 INRIYPTIIGI-----EQAQLVRDAFYADYKTKHS----GRRPFVNPAPRIRWGYADSLP 512
Query: 336 ETVIENCKSIRNEMRSAI-SSLLKDDG--------ILVTPTTAYP-----------PPKL 375
+E + + +S I +++LK + + V P T P P
Sbjct: 513 TGTLEEAITNQTAFQSWIDNNVLKPNAQSCSDSLLVYVEPATRMPLYRDCYRNEPAIPFG 572
Query: 376 GGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
G M+S Y ++ I + QVT G +K P SV+ +A G D L V
Sbjct: 573 SGANMISV-YGGVPDMVIPIGEKTYVSQVT---GVEEKSPVSVNLVAAKGCDGMLFRLVN 628
Query: 436 NM 437
+
Sbjct: 629 EL 630
>gi|407787573|ref|ZP_11134713.1| putative amidase [Celeribacter baekdonensis B30]
gi|407199273|gb|EKE69293.1| putative amidase [Celeribacter baekdonensis B30]
Length = 386
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 179/397 (45%), Gaps = 41/397 (10%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
TG + + D DI G VTG G +A + + A + VV L+ G IGK + E A+
Sbjct: 20 TGPTVVIKDCIDIAGTVTGCGSEAFA-SAAPALENAVVVDALLTAGCRIIGKANMHELAF 78
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N + TP NP P ++PGGSSSG+A AVA+ L DF++G DT G VR P+ CG++
Sbjct: 79 GMTGVNGFHGTPVNPNWPDRIPGGSSSGSAAAVASGLCDFAIGTDTGGSVRQPAICCGVI 138
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
G +P++G +S G+ P ++SLD VG FARD ++ + F +P ++ A
Sbjct: 139 GIKPTFGRISRKGLSPKNSSLDCVGAFARDMDMIE-TAMAAMDPTF----TPETLVNAP- 192
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L +I +D V +V L + + Y L F + M
Sbjct: 193 --KLTRIKSDPVAEV----------GDPLVYALMDAYPGMGYECLPHFEAA---FQAGMT 237
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLK 358
+I YE ++ P L DI + ++E + +++R + + +LL+
Sbjct: 238 VIS-YETAAAFGHLLDEGAP-LGADIHKRLTAARHVTEAQLAEAEAVRTAFTAEVDALLE 295
Query: 359 DDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
LVTP PP L + +L R F+L SG +T+P
Sbjct: 296 QYDALVTPALPVIPPTLSEAQDPQTILPLTRFLRPFNL------SGHPAITLPARTNSGL 349
Query: 415 PTSVSFIARHGGD-------RFLLDTVQNMYASLQEQ 444
P + + R G + R+++ V + + Q Q
Sbjct: 350 PIGLQLVGRKGEEARLCAIARWIVSCVPDFQSKDQSQ 386
>gi|409440848|ref|ZP_11267843.1| Amidase [Rhizobium mesoamericanum STM3625]
gi|408747143|emb|CCM79038.1| Amidase [Rhizobium mesoamericanum STM3625]
Length = 454
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLFDI+G T G A + A +TVV+TL + G IG T + EFA
Sbjct: 72 LDGIPIAWKDLFDIKGRTTTAGSTVLA-SGPVAQADATVVATLEQAGMVSIGCTNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP + ++PGGSSSGA V VAA LV ++G DT G VR+P+A
Sbjct: 131 FSGLGINPHYGTPHNPRSSDVPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAALN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GI+G++ ++G G+ P++ SLD++G R
Sbjct: 191 GIVGYKATWGRYPMTGVYPLAKSLDSLGPLTR 222
>gi|395799160|ref|ZP_10478442.1| hypothetical protein A462_27878 [Pseudomonas sp. Ag1]
gi|395336847|gb|EJF68706.1| hypothetical protein A462_27878 [Pseudomonas sp. Ag1]
Length = 441
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 94/160 (58%), Gaps = 6/160 (3%)
Query: 53 KAPHPLT---GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+A PL+ G+ A DLFD+ G +T G + R AA + V L G +G
Sbjct: 50 RAGQPLSVFDGVPLAWKDLFDVAGSITTAGA-AYRRNAPAALLDAPSVGLLCRAGMVSVG 108
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
KT + E AYS G N H+ TP NPA+ Q +PGGSSSG+AVAVAA +V ++G DT G
Sbjct: 109 KTNLSELAYSGLGLNPHFGTPHNPASVDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGS 168
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+R+P+A G++G+R S S G+ P++ +LD++G R
Sbjct: 169 IRIPAALNGVVGYRSSCRRYSRDGVFPLAHTLDSLGPLTR 208
>gi|188583116|ref|YP_001926561.1| allophanate hydrolase [Methylobacterium populi BJ001]
gi|179346614|gb|ACB82026.1| allophanate hydrolase [Methylobacterium populi BJ001]
Length = 603
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P++A T A ++ V L+ GA +GKT +D+F
Sbjct: 67 PLWGVPFAVKDNVDVAGLPTTAACPDFAFTPQA---SAPAVERLLAAGALLVGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P+ +PGGSSSG+AVAVA LV FSLG DT G RVP+
Sbjct: 124 ATGLVGVRTPYPVPRNAIDPAVVPGGSSSGSAVAVARGLVGFSLGTDTAGSGRVPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G+VS G++P +LDT+ FA
Sbjct: 184 IVGLKPSLGSVSSRGVVPACRTLDTLSVFA 213
>gi|445407381|ref|ZP_21432304.1| amidase [Acinetobacter baumannii Naval-57]
gi|444780975|gb|ELX04899.1| amidase [Acinetobacter baumannii Naval-57]
Length = 369
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTLTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQTLQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ ++T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAQTTLEQVKQAEVVKAQLTKELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|430810206|ref|ZP_19437321.1| amidase, partial [Cupriavidus sp. HMR-1]
gi|429497440|gb|EKZ95973.1| amidase, partial [Cupriavidus sp. HMR-1]
Length = 419
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 111/208 (53%), Gaps = 15/208 (7%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVD 114
HPL GL +V DL+DI G VT AR + A+ +TVV+ L GA +G+T +
Sbjct: 34 HPLAGLPVSVKDLYDIAGEVTRAA--SAARQDAVPATADATVVARLRAAGAALVGRTNMT 91
Query: 115 EFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
EFA+S G N H+ TP NP S ++PGGSSSGAAV+VA LG DT G +R+P+
Sbjct: 92 EFAFSGVGINPHFGTPVNPCDSSVARIPGGSSSGAAVSVAIGTAVAGLGSDTGGSIRIPA 151
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS--- 229
A CGI+GF+P+ V G P+S +LDT AR V V+ P Q
Sbjct: 152 ALCGIVGFKPTSRRVPLTGAFPLSYTLDTACAMARTLTDCIAVDSVIADAPVIPQMKAAT 211
Query: 230 ------PRQIIIADDCFELLKIPADRVV 251
PRQ+++ DD E + DR +
Sbjct: 212 AIRLAIPRQLVL-DDLDEPVSKAFDRAI 238
>gi|222106661|ref|YP_002547452.1| allophanate hydrolase [Agrobacterium vitis S4]
gi|221737840|gb|ACM38736.1| Allophanate hydrolase [Agrobacterium vitis S4]
Length = 597
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 32 QDFGAFIE---KLQLLPPPQPLPPKAPH--PLTGLSFAVSDLFDIEGYVTGFGHPEWART 86
D G F+E K LL Q L +P PL G+ FAV D D+ G T P++A T
Sbjct: 37 NDPGIFLELADKASLLDQAQALGAFSPETKPLWGIPFAVKDNIDVAGLPTTAACPDYAYT 96
Query: 87 HSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSG 146
+TVV L + GA IGKT +D+FA + G + P N P +PGGSSSG
Sbjct: 97 PEI---DATVVRLLKDAGALVIGKTNLDQFATGLVGVRTPHAIPRNAIDPKLVPGGSSSG 153
Query: 147 AAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+AVA A +V F+LG DT G R+P+ I+G +PS GA+S G+IP +LD V FA
Sbjct: 154 SAVATAQGIVSFALGTDTAGSGRIPAGLNNIVGLKPSVGALSATGVIPACRTLDCVSIFA 213
>gi|375134962|ref|YP_004995612.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
calcoaceticus PHEA-2]
gi|325122407|gb|ADY81930.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Acinetobacter calcoaceticus PHEA-2]
Length = 369
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 180/390 (46%), Gaps = 50/390 (12%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPAQDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P++G VS G+ P S+SLD VG FA +++ + + F + IA
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQI-IDPTFKSTEFTSAPKIA---- 188
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLI 300
+L + AD ++ I Q + NL E KV + + ++ N
Sbjct: 189 -VLDVKADEIIWNCI--------YQAFQKANL-ETVLEKVEHFEAAYDAGMQIIN----- 233
Query: 301 QRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAISSL 356
YE N + E + L I +++ G +L+ + T +E K +R ++ + +L
Sbjct: 234 --YE---NWQAFGELTQTGL---IGSDVNGRLLKAAATTLEQVKQAEVVRAQLTQELDAL 285
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGYYD 412
L+ LV PT PPK +SE AF +L+ ++SG ++VPL +
Sbjct: 286 LEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTALVRPFNLSGHPVISVPLETSE 339
Query: 413 KCPTSVSFIARHGGD-------RFLLDTVQ 435
P + +++H D +F +D +Q
Sbjct: 340 GLPVGLQIVSKHQKDEQLCAIAKFFIDAMQ 369
>gi|410646870|ref|ZP_11357315.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola agarilytica NO2]
gi|410133574|dbj|GAC05714.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola agarilytica NO2]
Length = 373
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 170/390 (43%), Gaps = 47/390 (12%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+ V D D+ G+VT G A + A+ + VV+ ++ G +GK + E AY +
Sbjct: 16 LTGGVKDNIDVAGFVTQAGSEALAH-NPKATEHADVVNAMLSSGVKLVGKLNMHELAYGM 74
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP N P +PGGSSS A AVA +DFS+G DT G +RVP+A CG+ G
Sbjct: 75 TGVNAYRGTPVNYLFPDYIPGGSSSACAAAVAQGAIDFSIGTDTGGSIRVPAACCGVYGL 134
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P+YG +S G++P ++LD VG A F+A++ R + D F
Sbjct: 135 KPTYGRISRKGVLPQESTLDCVGPLA-----------------FSAEKLIRAMQSIDSTF 177
Query: 241 ------ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+++K+ V V K T + + E + + + +PSL + L
Sbjct: 178 SPVASKDIIKLGK---VTVNAKHTIQALVDGAIDKEFI-QLRPAALPSLVEAFEVGLPLM 233
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
N +E ++E+ K L D+ + +I E+++ +R + +
Sbjct: 234 N-------FEMCQAFGHFVETGK--LGNDVQNRLLAARDIDESIVAKANVVRKKFTQEVD 284
Query: 355 SLLKDDGILVTPTTAYPPPK----LGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
L+ LV PT A P K L G+ L R F+L SG +T+P+
Sbjct: 285 RALRGVDALVLPTLAAFPLKRTDALAGQNDLQISSLTRPFNL------SGHPAITIPIRN 338
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
P + + G D + Q + S
Sbjct: 339 NLGKPVGMQLVGAKGNDEMICYIAQKISDS 368
>gi|398803836|ref|ZP_10562850.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Polaromonas sp. CF318]
gi|398095700|gb|EJL86035.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Polaromonas sp. CF318]
Length = 450
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 184/403 (45%), Gaps = 41/403 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DLFD+ G VT G A+ A + V G A +G+T + EFA
Sbjct: 68 LAGIPVSVKDLFDVAGQVTAAGSKVLAQAAPAQADCPAVARLRAAG-AALVGRTNMVEFA 126
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NPA P+ ++PGGSSSGAAV+VA LG DT G +R+P+A C
Sbjct: 127 FSGVGINPHYGTPANPADPATARIPGGSSSGAAVSVATGAALVGLGSDTGGSIRIPAALC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQR------- 228
GI+GF+ + V G +P+STSLDTV R + V VL AA+R
Sbjct: 187 GIVGFKSTARLVPTAGALPLSTSLDTVSALTRSVRDAVTVHEVL-----AARRVELTGKP 241
Query: 229 -SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHEN--LGEYFDSKVPSLKG 285
S ++ +A + D + + V ++ E+ QVL+ + E ++ L
Sbjct: 242 LSGYRLAVAGTLMQ------DALSRTVAQAFERSL--QVLREAGAKIVEIPLGEITELTA 293
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+ T G + + Y + H + I + DP ++ I +S + +
Sbjct: 294 INATGG-----LSAAESYAW---HRKLIAERQAGYDPRVALRILRGAGMSAADYIDLLAA 345
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLL----SIASVSG 400
R + + + + L +++PT P + G +L++D + R LL S+ ++
Sbjct: 346 RKDWIARMEARLDGFDAVLSPTVPLVAPPIAG--LLNDDTEFFRVNGLLLRNTSVVNMLD 403
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
C +++P + P + D +LD + A+L +
Sbjct: 404 GCAISLPCHAPGQLPVGLMLWHAALHDDTMLDLALQVEAALAQ 446
>gi|260550278|ref|ZP_05824490.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. RUH2624]
gi|424055457|ref|ZP_17792980.1| hypothetical protein W9I_01856 [Acinetobacter nosocomialis Ab22222]
gi|425739900|ref|ZP_18858081.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-487]
gi|260406590|gb|EEX00071.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. RUH2624]
gi|407438652|gb|EKF45195.1| hypothetical protein W9I_01856 [Acinetobacter nosocomialis Ab22222]
gi|425495718|gb|EKU61891.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-487]
Length = 369
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 178/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHTFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAEYTHTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
LL + AD +V I Q L+ NL E KV + + ++ N
Sbjct: 187 -LALLDVKADEIVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL L+ PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLDKYDALILPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAITKFCVDAMQ 369
>gi|227823710|ref|YP_002827683.1| amidase [Sinorhizobium fredii NGR234]
gi|227342712|gb|ACP26930.1| putative Glu-tRNA amidotransferase [Sinorhizobium fredii NGR234]
Length = 435
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 174/394 (44%), Gaps = 22/394 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DLFDI G T G R AS +T+V L GA IGKT + EF
Sbjct: 56 PLDGRIVSIKDLFDIAGEPTLAGS-IIRRMAPPASADATIVRRLRAAGAVIIGKTHMTEF 114
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY P N P +PGGSSSGA V+VA D ++G DT G VR+P+A G
Sbjct: 115 AFTAVGLNPHYPVPGNAVDPMLIPGGSSSGAGVSVAEGTSDIAIGSDTGGSVRIPAALQG 174
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ V G P+S SLD++G A L L A R +
Sbjct: 175 LVGFKPTARRVPLDGAFPLSPSLDSIGPLA-----LSVADCALADAVMAGDRPEPLTPLP 229
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLF--GRQVLKH--ENLGEYFDSKVPSLKGFHKTNGE 292
D + L IP +++ + K F G Q L L E + + G
Sbjct: 230 VDGLK-LGIPKGVLLEELAPDVAKAFEAGLQRLSRAGARLAELEIDDLLARFAEATAIGS 288
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
L + E H +W+ + +DP + + + L + +T +EN R+ + A
Sbjct: 289 LAGL-------EASRIHADWLVDDEAPVDPRVKSPLRRRLAVPDTALENLLKTRHALARA 341
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPLG 409
+ L +++ PTT P ++ E +Y+ LL +A+ +T+P+
Sbjct: 342 MDGRLAPFDLVLLPTTPIPAVRIAAVEEDKREYRRIEGLLLRNTEVANQFDLTAITLPMP 401
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
P + + R+G DR LL + LQE
Sbjct: 402 GA-ALPAGLMLMGRNGTDRTLLRLAACVERLLQE 434
>gi|325957808|ref|YP_004289274.1| glutamyl-tRNA(gln) amidotransferase subunit A [Methanobacterium sp.
AL-21]
gi|325329240|gb|ADZ08302.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Methanobacterium sp.
AL-21]
Length = 459
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 150/312 (48%), Gaps = 39/312 (12%)
Query: 90 ASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAV 149
S +TVV + + IG T +DEFA + ++ NPAAP ++PGGSS G+AV
Sbjct: 96 GSYDATVVKRIKQEDGIIIGMTNMDEFAAGSSTETSYFGHTENPAAPGRIPGGSSGGSAV 155
Query: 150 AVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD- 208
AVAA++ D S+G DT G +R P++ CG++GF+P+YG VS G++ ++ S D +G F+RD
Sbjct: 156 AVAAEMCDLSIGSDTGGSIRNPASHCGVVGFKPTYGVVSRQGLLDLAMSFDQIGPFSRDV 215
Query: 209 --PKILRHV--GHVLLQLPFAAQRSPR------QIIIADDCFELLK----IPADRVVQVV 254
+L V G+ + SP+ Q + ++K + D++V +V
Sbjct: 216 SGAALLMDVIGGYDETECTSVKWDSPKFTDQLGQNSLEGTSLGVVKQFFDVSDDKIVNIV 275
Query: 255 IKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEF-----KNNH 309
+S +K+ HE +Y D +P+ LI EF K +
Sbjct: 276 EESIDKMKDMGAEVHELSFDYIDLCLPTY--------------YLINYVEFFSATRKYDG 321
Query: 310 NEWIESVKPALDPDISAEI--GEML---EISETVIENCKSIRNEMRSAISSLLKDDGILV 364
++ E ++ ++ I G + E S + R+ ++ ++ LL++ ++V
Sbjct: 322 RKYGERIEEVCGEEVLRRIYMGSYISQKEFSGKYYKKALQARSLIKREVNKLLQNVDVIV 381
Query: 365 TPTTAYPPPKLG 376
PT P K+G
Sbjct: 382 GPTVPMLPHKIG 393
>gi|386397044|ref|ZP_10081822.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
gi|385737670|gb|EIG57866.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
Length = 468
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 182/425 (42%), Gaps = 67/425 (15%)
Query: 49 PLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
P +A PL G+ F V D D+ GY T G PE+A R + VV L+E GA +
Sbjct: 70 PAAVRAKMPLYGVPFVVKDNIDVVGYDTTAGCPEYAYR---PERNAFVVDRLLEAGAILV 126
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
K +D+FA + G Y P NP + + GGSSSG+ VA+A FSLG DT G
Sbjct: 127 AKANLDQFATGLTGMRSVYGFPQNPYSADHIVGGSSSGSGVAIACKTAHFSLGTDTAGSG 186
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQR 228
R+P+ F GI GFRPS G +S+ G++P LD+ F R P LR V
Sbjct: 187 RIPAGFLGIYGFRPSGGVLSNTGVVPSGRMLDSCSVFCRWPDDLRLV------------M 234
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG------EYFDSKVPS 282
S + A D F S E L R+ K +G EYF +
Sbjct: 235 SAAGVYDAADPF----------------SKEVLGRRKAFKDPVVGIIDPKEEYFLGDAEA 278
Query: 283 LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE--------- 333
+ + L+ + I++ +++ + KP L + +A +G +E
Sbjct: 279 KRVYAAGIERLRGLGYSIEQIDYEPFAEISDMTYKPELMAERAAVLGPFIEAHPEGTYSP 338
Query: 334 ISETVIEN---CKSI--------RNEMRSAIS-SLLKDDGILVTPTTAYPPPKLGGKEML 381
+ + + N C+++ R E+ I +L PT P + + +
Sbjct: 339 VVKAALVNSTDCRAVDAYKILHRRTELAREIELGTWSRVDMLALPTA----PTIHKRSEV 394
Query: 382 SED--YQNRAFSL-LSIASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLDTVQNM 437
D Y + + L ++ A G ++VP G D P+ + F+ R G D L+D Q+
Sbjct: 395 ERDPAYASTSLGLFVNFAPHLGIPALSVPNGMRRDGLPSGLMFVGREGDDGLLVDIAQS- 453
Query: 438 YASLQ 442
+A LQ
Sbjct: 454 FAELQ 458
>gi|66047165|ref|YP_237006.1| hypothetical protein Psyr_3938 [Pseudomonas syringae pv. syringae
B728a]
gi|63257872|gb|AAY38968.1| Amidase [Pseudomonas syringae pv. syringae B728a]
Length = 457
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 152/346 (43%), Gaps = 47/346 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 182 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------- 222
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 --RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 279
Query: 286 FHKTNGELKNV---------MRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIG 329
+ +G L V + LIQ+ + H ++S LDP + +
Sbjct: 280 ALRASGALIEVKPCQAFQATLLLIQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRLE 339
Query: 330 EMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL 375
+ +++ N + R ++ + +L D +L+TPT A+ P L
Sbjct: 340 AARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPL 384
>gi|421650552|ref|ZP_16090928.1| amidase [Acinetobacter baumannii OIFC0162]
gi|425750793|ref|ZP_18868748.1| amidase [Acinetobacter baumannii WC-348]
gi|445459234|ref|ZP_21447505.1| amidase [Acinetobacter baumannii OIFC047]
gi|408510187|gb|EKK11850.1| amidase [Acinetobacter baumannii OIFC0162]
gi|425485250|gb|EKU51647.1| amidase [Acinetobacter baumannii WC-348]
gi|444774445|gb|ELW98529.1| amidase [Acinetobacter baumannii OIFC047]
Length = 369
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 179/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS GI P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSREGIYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTLTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTKELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCVIAKFCVDAMQ 369
>gi|403511846|ref|YP_006643484.1| amidase family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402803507|gb|AFR10917.1| amidase family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 463
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 175/405 (43%), Gaps = 60/405 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ + DL D+ G T RT A+ STV + L GA +GKT EF
Sbjct: 70 PLHGVPVGLKDLIDVAGMPTTAS--SRVRTDHRATADSTVAARLRSAGAVLVGKTHTHEF 127
Query: 117 AYSING--TNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY + T +D S++ GGSS G+AVAVAA FSLG DT G +RVPSA
Sbjct: 128 AYGLTTPQTGNAWDR-------SRVAGGSSGGSAVAVAAGEATFSLGTDTGGSIRVPSAL 180
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
G++G +P+YG V GI P+S SLD VG I R V L L PR
Sbjct: 181 NGVVGLKPTYGLVPRHGITPLSWSLDHVG------PITRTVEDAALVLNALTGHDPR--- 231
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS--------LKGF 286
D L +P D + + L G +V + YF+ P + G
Sbjct: 232 ---DPASLDTLPVDHRPE----TDPDLSGVRVGVPSHY--YFEHVDPEVAAAVHHAIAGM 282
Query: 287 HKTNGELKNVMRLIQRY-----------EFKNNHNEWIESVKPAL---DPDISAEIGEML 332
+ L V + RY E H + +V P L D I E GE++
Sbjct: 283 EELGARLVEVEIPMTRYVQATQWGLMVPEATTYHERTLRTV-PELYQEDVRILLEAGELM 341
Query: 333 EISETVIENCKSIRNEMRSAISSLLKDDGILVTPT---TAYPPPK--LGGKEMLSEDYQN 387
+ + + R MR A + LL++ ++ +PT TA P + + + +E +
Sbjct: 342 SAGDHL--RAQRARTLMRDAWNRLLEEVDMVASPTVPMTAVPATQESVAWPDGTTESVSD 399
Query: 388 RAFSLLSIASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLL 431
L + A+++G ++VP+G+ P + I R +R LL
Sbjct: 400 AYVRLSAPANITGLPALSVPVGHDTAGMPIGMQLIGRPLDERTLL 444
>gi|386775184|ref|ZP_10097562.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Brachybacterium paraconglomeratum LC44]
Length = 475
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 173/406 (42%), Gaps = 76/406 (18%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL AV D D+ G VT G E R H + ++ VV L E GA +G T +
Sbjct: 69 PRLLDGLPVAVKDNLDVAGRVTTMGS-EIFRDH-VPTGSAAVVDRLEEHGAVRLGATNLH 126
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA + N H+ NP S+ PGGSS G+AVAVA+ + +LG DT G +R+P+A
Sbjct: 127 EFALGVTTENPHHGICRNPWDTSRTPGGSSGGSAVAVASGMALAALGTDTSGSIRIPAAA 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWF---------------ARDPKILRHVGHVL 219
CGI+G +P+YG +S +G P + SLD VG DP+ G
Sbjct: 187 CGIVGLKPTYGRISSVGCYPEAWSLDHVGVLTSSVADAALLLDTLSGHDPR-----GPSS 241
Query: 220 LQLPFAAQR----SPRQIIIA-DDCFELLKIPADRVVQVVIKSTEKLFGR--QVLKHENL 272
L LP R PR + I ++ F I D V+ +++ + R L +L
Sbjct: 242 LPLPPTTSRQELDDPRPLRIGVEEEFFFAGI--DPAVEGIVREALEGLTRAGATLVPISL 299
Query: 273 GEYFDS-------KVPSLKGFHKT----NGEL--KNVMRLIQRYEFKNNHNEWIESVKPA 319
D+ FH+T +GEL ++V RL+
Sbjct: 300 PSLSDAVFALTVIDTAETTAFHETQLRRHGELYGEDVRRLV------------------- 340
Query: 320 LDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
E G + + V + IR+ +R+ + D ++ +PT P++G
Sbjct: 341 -------ECGALATAVDYV--RAQQIRSLVRAEFARAFADVDVIASPTLPIRTPRIGETS 391
Query: 380 M----LSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFI 421
+ ++ D L+ ++++G V+VP G D P + I
Sbjct: 392 VEVGGVTRDRDAELMRLVGPSNLAGIPSVSVPCGMLDGMPVGLQLI 437
>gi|422675326|ref|ZP_16734671.1| hypothetical protein PSYAR_21412 [Pseudomonas syringae pv. aceris
str. M302273]
gi|330973045|gb|EGH73111.1| hypothetical protein PSYAR_21412 [Pseudomonas syringae pv. aceris
str. M302273]
Length = 457
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 152/346 (43%), Gaps = 47/346 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 182 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------- 222
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 --RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 279
Query: 286 FHKTNGELKNV---------MRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIG 329
+ +G L V + LIQ+ + H ++S LDP + +
Sbjct: 280 ALRASGALIEVKPCQAFQATLLLIQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRLE 339
Query: 330 EMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL 375
+ +++ N + R ++ + +L D +L+TPT A+ P L
Sbjct: 340 AARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPL 384
>gi|289669967|ref|ZP_06491042.1| amidase [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 486
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 164/380 (43%), Gaps = 40/380 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ F V DLFD+ G VT G A+ AA R + VV L + GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAAGRAQCAPAA-RDAAVVQRLGDAGAVLVGTANMDEFA 166
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY T TNP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG+
Sbjct: 167 YGFATVNAHYGTTTNPHDHQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGV 226
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++GAV G+ P +LD VG FA LR V V+
Sbjct: 227 YGLRPTHGAVPVDGVFPFVDALDVVGPFATSVSDLRRVYEVM------------------ 268
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSL--KGFHKTNGELKN 295
C L P+ + I F R NL D+ + +L T EL
Sbjct: 269 -CGHAL--PSRTTGNLRIARLGGWFQR------NLDPDLDAGLEALLTACNSTTTIELPE 319
Query: 296 VMR------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
R ++ E + H + + DP + L++ + + + + +
Sbjct: 320 AERARAAAFVLTAAEGGHRHRSALHTHGAQFDPATRDRLLAGLQLPASAVADAQRFAHWF 379
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----VSGCCQVT 405
+A+ +L D +L+ P T P++ + + A + L I + ++ C +
Sbjct: 380 ANAMHALWDDVDVLIAPATPCVAPRIDQDTIQIDGLPVSARANLGIFTQPLGLAACPVLA 439
Query: 406 VPLGYYDKCPTSVSFIARHG 425
PL + P V IA G
Sbjct: 440 APLPRPGRLPLGVQLIAAPG 459
>gi|403675209|ref|ZP_10937390.1| Glu-tRNA amidotransferase [Acinetobacter sp. NCTC 10304]
Length = 369
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 179/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTLTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ ++T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAQTTLEQVKQAEVVKAQLTEELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK+ E L+ R F+L SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPRIPPKVSEAENTVTFLNLTGLVRPFNL------SGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|302188198|ref|ZP_07264871.1| hypothetical protein Psyrps6_17715 [Pseudomonas syringae pv.
syringae 642]
Length = 457
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 180/420 (42%), Gaps = 58/420 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + S ++PGGSSSG+AVAVA V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 182 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------- 222
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 --RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 279
Query: 286 FHKTNGELKNV--MRLIQRYEFKNNHNEWIESVKP--------------ALDPDISAEIG 329
++ G L V + Q W+ + + LDP + +
Sbjct: 280 ALRSGGALIEVKPCQAFQATLLLTQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRLE 339
Query: 330 EMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED----Y 385
+ +++ N + R ++ + +L D +L+TPT A+ P L +L++D
Sbjct: 340 AARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLA--PLLNDDDLFVQ 396
Query: 386 QNRAFSLLSI-ASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLD---TVQNMYAS 440
N A L++ S+ V++P G PT + A G D LL TV+++ A+
Sbjct: 397 TNLATLRLTMPGSLLNMPGVSLPCGRDASGLPTGLLLSAPAGEDARLLRAALTVESLIAA 456
>gi|359397012|ref|ZP_09190062.1| Urea amidolyase [Halomonas boliviensis LC1]
gi|357968806|gb|EHJ91255.1| Urea amidolyase [Halomonas boliviensis LC1]
Length = 606
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 36 AFIEKL---QLLPPPQPLPPKAPH--PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
A+I +L QL P + L ++P PL G+ FA+ D D+ G T G P +A T
Sbjct: 42 AWITRLTREQLEPYLKRLEGESPQTLPLYGIPFAMKDNIDLAGIPTTAGSPAYAYT---P 98
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTN--KHYDTPTNPAAPSQMPGGSSSGAA 148
+ + VV L++ GA +GKT +D+FA + G + Y TP N P+ +PGGSSSG+A
Sbjct: 99 TENAFVVQQLIDAGAIPMGKTNLDQFATGLVGERALEVYGTPANAFDPTLVPGGSSSGSA 158
Query: 149 VAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
V AA +V F+LG DT G RVP+ F + G +PS G +S G++P +LDT+ FA
Sbjct: 159 VVTAAGMVSFALGTDTAGSGRVPACFHNLYGVKPSLGLLSTRGVVPACATLDTISLFA 216
>gi|113867520|ref|YP_726009.1| amidase [Ralstonia eutropha H16]
gi|113526296|emb|CAJ92641.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
Length = 451
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 178/392 (45%), Gaps = 52/392 (13%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
HPL GL +V DL+D+ G VT + + A+ +TVV+ L GA +G+T + E
Sbjct: 65 HPLAGLPVSVKDLYDVAGEVTSAAS-LVRKDAAPATADATVVARLRAAGAALVGRTNMTE 123
Query: 116 FAYSINGTNKHYDTPTNPAAP---SQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
FA+S G N HY TP NPA +++PGGSSSGAAV+VA L +LG DT G +R+P+
Sbjct: 124 FAFSGVGINPHYGTPANPAGTDGVARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIPA 183
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL--------LQLPF 224
A CGI GF+P+ V G P+S +LDT AR V V+ + P
Sbjct: 184 ALCGITGFKPTARRVPLTGAFPLSYTLDTACAMARTVSDCIAVDSVIADSAVIPRVTNPA 243
Query: 225 AAQRS-PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-----LKHENLGEYFDS 278
A + + PRQ+++ D + VV ++ ++ GR L+H +L E +
Sbjct: 244 ATRLAIPRQVLL------------DDLDPVVARAFDRALGRLSAAGVQLEHVDLPELGE- 290
Query: 279 KVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV 338
L G + G E H + + + DP +++ I +S
Sbjct: 291 ----LAGLNAQGG--------FSSAEAFAIHRHLLAARRDLYDPRVASRIDRGANVSAAD 338
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASV 398
+ R + + + + L +V PT P++ + ++D Q + L + +
Sbjct: 339 YIDLGRARLDWIARMEARLARFDAVVCPTVPMVAPEIA--PLRTDDAQFFRVNALLLRNT 396
Query: 399 SG-----CCQVTVPLGYYDKCPTSVSFIARHG 425
S C +++P D+ P V + HG
Sbjct: 397 SAFNFLDGCSISLPCHAPDELP--VGLMLSHG 426
>gi|269127198|ref|YP_003300568.1| amidase [Thermomonospora curvata DSM 43183]
gi|268312156|gb|ACY98530.1| Amidase [Thermomonospora curvata DSM 43183]
Length = 445
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 129/278 (46%), Gaps = 32/278 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV +L D+ G G+G +A A+ + V L GA +G T EF
Sbjct: 73 PLFGVPVAVKELIDVAGAEIGYGSRAFA--GRIATADAEAVRRLRAAGAIVVGVTRSPEF 130
Query: 117 AYSINGTNKHYDTPT-NPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S++G + P NP P++ PGGSSSG+AVAVA V +LG DT G +R+P+A C
Sbjct: 131 GWSLSGRDAASPAPVANPWDPARDPGGSSSGSAVAVATGTVCLALGTDTAGSIRMPAALC 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ--RSPRQI 233
G+ GF+P+ GAVS G+ +S S D VG A P+ L+ L P + Q + P +
Sbjct: 191 GVWGFKPTRGAVSDRGVRLLSRSFDHVGPLAGTPRDLQAAYEALGGWPASPQDAQPPGTV 250
Query: 234 IIA------DDCFELLKIPADRVVQVVIKSTEKLFG---------RQVLKHENLGEYFDS 278
++A D E L ADR + + + F +L HE Y D
Sbjct: 251 VVAPRDGLHPDYAEALTAAADRFTALGWRVLTEDFAPPEDVIDGYMMMLLHEGARLYADE 310
Query: 279 KVPSLK------------GFHKTNGELKNVMRLIQRYE 304
S++ G T+ ++ R + RY
Sbjct: 311 PGSSVELCTEPVQEMLRAGHGVTDALYRDARRTVARYR 348
>gi|119512906|ref|ZP_01631970.1| amidase [Nodularia spumigena CCY9414]
gi|119462444|gb|EAW43417.1| amidase [Nodularia spumigena CCY9414]
Length = 465
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 185/420 (44%), Gaps = 46/420 (10%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
K P L G+ FAV +L+DI G T G + + AS+ +T V+ L + GA +G
Sbjct: 66 KNPGLLAGVPFAVKNLYDIAGLTTLAGS-KINTENPPASQDATAVAKLKQAGAVLVGALN 124
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DE+AY N HY NP ++ GGSS G++ AVAA LV +LG DT G +RVP+
Sbjct: 125 MDEYAYGFVTENSHYGATHNPHDLQRIAGGSSGGSSAAVAAGLVPLTLGSDTNGSIRVPA 184
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQR 228
A CG+LGF+P+YG +S G+ S+SLD VG FAR + + VL + P +R
Sbjct: 185 ALCGVLGFKPTYGRLSRAGVALFSSSLDHVGTFARSVEDIATAFDVLQGEDERDPVCTKR 244
Query: 229 SPR-------------QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEY 275
SP +I +ADD F P + V K E L ++ EY
Sbjct: 245 SPELCVPQLYQDISQIRIAVADDYFTQSASP--EALAAVQKVAEAL---------SVTEY 293
Query: 276 FDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEIS 335
++ H+ + +I E N H E ++S DP I
Sbjct: 294 V-----TIPEAHRA----RAAAFVITASEGANLHLESLKSRPQDFDPATRDRFLAGALIP 344
Query: 336 ETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRAFSLL 393
+ + R + + ++ I++ PTT P +G K M+ E+ R L
Sbjct: 345 SSWYLQAQRFRRWYGDRLREIWQNVDIILAPTTPISAPLIGQKTMILDGEEISVRPHLGL 404
Query: 394 SIASVS--GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKS 451
+S G ++VP+ D P V IA + +L + A L+ Q I +S
Sbjct: 405 FTQPLSFIGLPVLSVPIQLPDSLPLGVQIIAAPYNEALIL----RVAAVLESQGVITGES 460
>gi|354598223|ref|ZP_09016240.1| Amidase [Brenneria sp. EniD312]
gi|353676158|gb|EHD22191.1| Amidase [Brenneria sp. EniD312]
Length = 449
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ ++ DLFD+ G T G A+ + VV+ L++ G +GKT + EFA
Sbjct: 70 LDGVPVSIKDLFDVAGEPTAAGS-RVLAAAPPAASHAAVVARLLQAGVVVVGKTNMTEFA 128
Query: 118 YSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N HY TP NP ++PGGSSSGAAVAVA + ++G DT G VR+P+AFC
Sbjct: 129 YSGLGINPHYGTPANPWDRDARRIPGGSSSGAAVAVADGMCFGAVGSDTGGSVRIPAAFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
G+ G++P+ + G++P+S SLD++G A
Sbjct: 189 GLTGYKPTARRIDDAGLLPLSPSLDSIGVIA 219
>gi|294056555|ref|YP_003550213.1| amidase [Coraliomargarita akajimensis DSM 45221]
gi|293615888|gb|ADE56043.1| Amidase [Coraliomargarita akajimensis DSM 45221]
Length = 439
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 149/369 (40%), Gaps = 29/369 (7%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G+S+A+ DL D G+ T G P ST+ L + GAT I K
Sbjct: 60 PDEDKPLRGISYALQDLIDAPGHATTCGAPFVEAFDGELDLPSTLYQRLDDLGATLIAKC 119
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
V EF G N+ Y +P + + GG + AV V + GID+ GG+R+P
Sbjct: 120 VPAEFGIDPRGRNQTYGDLQHPKNLTYISGGGAGSCVRAVQEKFVPLAFGIDSCGGMRIP 179
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
AF G GFR A G+ P+ SL+++ W L+ L A P
Sbjct: 180 CAFQGTYGFRMGQNAFIEHGVFPVMPSLESIAWATNSLDGLKATYSALYPSSVNASSRPV 239
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
+ ++ DD RV V S R + + ++ E + ++ F K G
Sbjct: 240 KGVVIDDA-------GCRVSPQVKNSL-----RTLTQALDIDEDPSLQTDLIRAF-KDGG 286
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ ++L+Q E H WI+ + D + I +E S +E I+ +R+
Sbjct: 287 ---SALQLLQSRELYAIHQYWIDEYRDRYDTSLLRRIYRGMECSTAEVERSGQIQERIRN 343
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEM-LSEDYQN----RAFSLLSIASVSGCC---- 402
++ L + L+ P + P P + + L D + S+LS + CC
Sbjct: 344 TMARLFQSYDFLIMPVSTVPTPTINDWTVDLEADLMQLNAPASLSVLSAIIIPTCCGAPQ 403
Query: 403 ----QVTVP 407
Q+ VP
Sbjct: 404 SCAAQIIVP 412
>gi|445429699|ref|ZP_21438292.1| amidase [Acinetobacter baumannii OIFC021]
gi|444761137|gb|ELW85554.1| amidase [Acinetobacter baumannii OIFC021]
Length = 369
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 180/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ--RSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ A+ R+P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKRAECTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL L+ PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLDKYDALILPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|390440116|ref|ZP_10228468.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis sp. T1-4]
gi|389836482|emb|CCI32592.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis sp. T1-4]
Length = 443
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 172/379 (45%), Gaps = 42/379 (11%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDIEG VT G + R H A + + + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQPLEAAGAVLVGATNMDEYA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 127 YGFVTENAHYGATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQRSPRQI 233
+G +P++G VS G+ +SLD +G+F+ + + + + L+ P + I
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSDNVADMAAIWSLFAKNNLKAPLNGLEGVK-I 245
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+ADD F+ P V++ V E+L V K + E ++ +
Sbjct: 246 ALADDYFQQGAEP--EVIEAVTAIAERL---GVTKKITIPETVRARAAAY---------- 290
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+I E N H +++ DP I + + R R +
Sbjct: 291 -----IITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQRFRRWYRDRL 345
Query: 354 SSLLKDDGILVTPTTAYPPPKLG-------GKEMLSEDYQNR---AFSLLSIASVSGCCQ 403
+ + I++TPT P+LG G+E+L R FS + + ++S
Sbjct: 346 REIFSEVDIILTPTIPCIAPQLGVEKMIIDGQELLIRPNLGRFTQPFSFIGLPALS---- 401
Query: 404 VTVPLGYYDKCPTSVSFIA 422
+P+ + P + IA
Sbjct: 402 --LPIKRSSRLPLGLQIIA 418
>gi|340783652|ref|YP_004750258.1| amidohydrolase, AtzE family [Acidithiobacillus caldus SM-1]
gi|340557805|gb|AEK59558.1| amidohydrolase, AtzE family [Acidithiobacillus caldus SM-1]
Length = 460
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 170/399 (42%), Gaps = 62/399 (15%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ FAV +LFDI+G VT G + R A + ST+V L GA +G +
Sbjct: 66 PGPLAGVPFAVKNLFDIQGEVTLAGS-KINRDLPPALQDSTLVRRLSAAGAILVGALNMG 124
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY G N HY NP S+M GGSS G+ AVA LV +LG DT G +RVPS+
Sbjct: 125 EYAYDFTGENLHYGASRNPHDLSRMTGGSSGGSGSAVAGGLVPLALGSDTNGSIRVPSSL 184
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CGI G +P+YG +S G P SLD VG A RS + +
Sbjct: 185 CGIFGLKPTYGRLSRGGSFPFCPSLDHVGPMA---------------------RSAQDLA 223
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQV-----LKHENLGEYF-----DSKVPSLK 284
+A ++ L+ P DR +V +S E + L+ LG YF D+ +L+
Sbjct: 224 LA---YDALQGPDDRDAALVRRSVEPVGTLTTELDSNLRIAVLGGYFAQQGTDAARRALQ 280
Query: 285 GFH-----KTNGELKNVMR------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE 333
K+ E+ V ++ E H + + DPD+ +
Sbjct: 281 RVADALGVKSTIEIPEVAAARAAAYVVTNAESSALHLPNLRTRPHDYDPDVRDRMLAGAL 340
Query: 334 ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPK-------LGGKEMLSEDY- 385
+ T + +R + ++ +L IL+ P T P LGG+EML +
Sbjct: 341 LPATAYLQAQRVRAHFQKIVADVLTRHDILLAPATPMTAPSIGQKTMVLGGEEMLVRPHL 400
Query: 386 --QNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIA 422
+ FS + + V Q+ D P V IA
Sbjct: 401 GLYTQPFSFIGLPVVVVPVQLP------DSLPIGVQVIA 433
>gi|418520101|ref|ZP_13086151.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410704055|gb|EKQ62540.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
Length = 486
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ F V DLFD+ G VT G R H ASR + VV L E GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAG--AAVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
I G RP++GAV G+ P +LD VG FA LR V VL P
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCVYDVLRGQPL 273
>gi|440224690|ref|YP_007338086.1| putative amidase [Rhizobium tropici CIAT 899]
gi|440043562|gb|AGB75540.1| putative amidase [Rhizobium tropici CIAT 899]
Length = 461
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A DLF I G T G A A + VV L G +G+ + EFA
Sbjct: 72 LDGIPVAWKDLFAIAGLPTTAGSIVLADAAPAQD-DADVVRALQAAGMVAVGRVNMSEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NP A ++PGGSSSG+AVAVAA LV ++G DT G VR+PSAF
Sbjct: 131 FSGIGLNPHYGTPLNPLATDVPRIPGGSSSGSAVAVAAGLVPVAIGTDTGGSVRIPSAFN 190
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G++ S+G S G+ P+STSLD++G R
Sbjct: 191 GLVGYKASHGRYSMAGVFPLSTSLDSLGPLCR 222
>gi|218290490|ref|ZP_03494610.1| Amidase [Alicyclobacillus acidocaldarius LAA1]
gi|218239511|gb|EED06706.1| Amidase [Alicyclobacillus acidocaldarius LAA1]
Length = 452
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 173/411 (42%), Gaps = 39/411 (9%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P+ PL G+ +V DL D T +GH + R H RT+ V+ L A IGK
Sbjct: 65 PEGLGPLAGIPISVKDLIDTSFLPTTYGHGRF-REH-VPDRTALCVARLQRAHALIIGKA 122
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+ EFA+ + N H+ NP P ++ GGSS G+A +V + S+G DT G VR+P
Sbjct: 123 HLHEFAFGVTNENPHFGPARNPRDPGRITGGSSGGSAASVVGGMAQASVGTDTGGSVRIP 182
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A G +GF+PSYG V G++P++ +LD HVG + + AA +
Sbjct: 183 AALTGCVGFKPSYGLVPTDGVLPLAPTLD-------------HVGTLANSVEDAAVVTAV 229
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD--SKVPSLKGFHKT 289
I D + L P R+ VI + F + +F+ + V +G +
Sbjct: 230 MAGIDPDAWLSLPAPGGRLRAAVIPNLVSRFA-----APEVSAWFEGLTHVLQNRGTIEI 284
Query: 290 NGELKNVMRLIQRY-------EFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
G + + I R+ E H W+ K A D+ + + +
Sbjct: 285 TGSVDLDVDEIARHQANILGAEAYATHRAWLTEHKDAYGADVRERLEDGARVDAASYAES 344
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----V 398
R R AI + ++ PTT P ++G + + LL+ + +
Sbjct: 345 LRFRARFRDAIRDVFAQYDCILLPTTPIPATRIGETTVWINGEERAVRPLLTRFTNPWNL 404
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIAT 449
SG +++P G P + + + GGD L+ + + +ADIA+
Sbjct: 405 SGAPAISIPAGQVSGLPMGLQIVGKPGGDAELIRIARRI------EADIAS 449
>gi|425465376|ref|ZP_18844685.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9809]
gi|389832377|emb|CCI24026.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9809]
Length = 443
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 26/328 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDIEG VT G + R H A + + + TL GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 127 YGFVTENAHYGATANPLDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQRSPRQI 233
+G +P++G VS G+ +SLD +G+F+ + + + + L+ P + I
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWSLFAKNNLKAPLNGLEGVK-I 245
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+ADD F+ P V++ V E+L V K + E ++ +
Sbjct: 246 ALADDYFQQGAEP--EVIEAVTAIAERL---GVTKKITIPETARARASAY---------- 290
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+I E N H +++ DP I + + R R +
Sbjct: 291 -----IITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQRFRRWYRDRL 345
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEML 381
+ + I++TPT P LG ++M+
Sbjct: 346 REIFSEVDIILTPTIPCIAPPLGVEKMI 373
>gi|320333783|ref|YP_004170494.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus
maricopensis DSM 21211]
gi|319755072|gb|ADV66829.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus
maricopensis DSM 21211]
Length = 483
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ + D +++G T G A + T+T V L GA IGK +DEF
Sbjct: 65 PLAGVPVVIKDNLNLQGTHTTCG--SRALGGYVSPYTATAVQRLRAAGAVIIGKANMDEF 122
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + + + NP P+++PGGSS G+AVAVA+ +V SLG DT G VR P+AF G
Sbjct: 123 AMGSSTESGAFGRARNPWDPARVPGGSSGGSAVAVASGMVPLSLGSDTGGSVRQPAAFTG 182
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
+ GF+P+YG VS G++ ++SLD VG FAR + L V V+
Sbjct: 183 VYGFKPTYGRVSRYGLVAYASSLDQVGPFARHAEDLATVMDVI 225
>gi|289628158|ref|ZP_06461112.1| hypothetical protein PsyrpaN_24013 [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649876|ref|ZP_06481219.1| hypothetical protein Psyrpa2_19319 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422585889|ref|ZP_16660945.1| hypothetical protein PSYAE_29038 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330871226|gb|EGH05935.1| hypothetical protein PSYAE_29038 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 457
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 178/408 (43%), Gaps = 55/408 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + ++PGGSSSG+AVAVA V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 182 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------- 222
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 --RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 279
Query: 286 FHKTNGELKNV--MRLIQRYEFKNNHNEWIESV------KPALDPDISAEIGEMLE---- 333
+ +G L V + Q W+ + +P LD D ++++ +
Sbjct: 280 ALRASGALIEVKPCQAFQATLLLTQQQGWLGAAEAFALHQPLLDSDAASQLDPRVRKRLD 339
Query: 334 ----ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEMLSEDY 385
+ +++ N + R ++ + +L D +L+TPT A+ PP P L +E+ +
Sbjct: 340 AARHMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLVPLLNDEELFIQ-- 396
Query: 386 QNRAFSLLSI-ASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLL 431
N A L++ S+ V++P G PT+V A G D LL
Sbjct: 397 TNLATLRLTMPGSLLNMPGVSLPSGSDASGLPTAVLLSAPAGEDARLL 444
>gi|239504016|ref|ZP_04663326.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB900]
gi|421679486|ref|ZP_16119358.1| amidase [Acinetobacter baumannii OIFC111]
gi|410391138|gb|EKP43514.1| amidase [Acinetobacter baumannii OIFC111]
Length = 369
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 179/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ IGKT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P +P+
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAECTLTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL E KV + + ++ N
Sbjct: 187 -LAVLDVKADEVVWNCI--------YQALQKANL-ETVLEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTKELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDGQLCAIAKFCVDAMQ 369
>gi|94310811|ref|YP_584021.1| amidase [Cupriavidus metallidurans CH34]
gi|93354663|gb|ABF08752.1| putative amidase [Cupriavidus metallidurans CH34]
Length = 450
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 112/207 (54%), Gaps = 13/207 (6%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
HPL GL +V DL+DI G VT + + A+ +TVV+ L GA IG+T + E
Sbjct: 65 HPLAGLPVSVKDLYDIAGEVTRAAS-AARQDAAPATADATVVARLRAAGAALIGRTNMTE 123
Query: 116 FAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FA+S G N H+ TP NP S ++PGGSSSGAAV+VA LG DT G +R+P+A
Sbjct: 124 FAFSGVGINPHFGTPVNPCDSSVARIPGGSSSGAAVSVAIGTAVAGLGSDTGGSIRIPAA 183
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS---- 229
CGI+GF+P+ V G P+S +LDT AR V V+ +PF Q
Sbjct: 184 LCGIVGFKPTSRRVPLTGAFPLSYTLDTACAMARTLTDCIAVDSVIADVPFIPQMKASTA 243
Query: 230 -----PRQIIIADDCFELLKIPADRVV 251
PRQ+++ DD E + DR +
Sbjct: 244 IHLAIPRQLVL-DDLDEPVSKAFDRAI 269
>gi|398834055|ref|ZP_10592004.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit,
partial [Herbaspirillum sp. YR522]
gi|398220685|gb|EJN07127.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit,
partial [Herbaspirillum sp. YR522]
Length = 278
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 131/304 (43%), Gaps = 35/304 (11%)
Query: 148 AVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
A AVAA L DF+LG DT G RVP+++CG+ G R ++G +S + P+S + DTV W A
Sbjct: 1 AAAVAAGLCDFALGTDTGGSTRVPASYCGLWGLRTTHGLLSCEAMAPLSPAFDTVTWLAS 60
Query: 208 DPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLK--IPADRVVQVVIKSTEKLFGRQ 265
++ VG LL D FE + +P D V+ + +F
Sbjct: 61 GAEVFERVGQALLP---------------DTAFEFKRALLPLD-----VLAQADDVFHAP 100
Query: 266 VLK-HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRY------EFKNNHNEWIESVKP 318
V++ HE L S H NGE + R Q Y + H EWIE +P
Sbjct: 101 VMRFHEALAGLLGDGARS----HLGNGE--QLERWRQTYITASAHDAWQTHREWIERERP 154
Query: 319 ALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGK 378
A P + ++ ++ + + +R + S L DG+ V P+ A P
Sbjct: 155 AFGPAVQGRWDMARATTDAAADDARQRQALVREQVRSWLGADGVAVMPSAASVAPLRQAS 214
Query: 379 EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
+ + R F + SIA + G QV++ L + P VS + G D L+ +
Sbjct: 215 AQEIDQVRARTFRITSIAGLCGLPQVSIALTTPEGLPIGVSLLGPAGSDLALIRLAIRLA 274
Query: 439 ASLQ 442
SL+
Sbjct: 275 QSLR 278
>gi|71733453|ref|YP_276071.1| hypothetical protein PSPPH_3935 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|422598745|ref|ZP_16673001.1| hypothetical protein PLA107_28625 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|71554006|gb|AAZ33217.1| amidase family protein [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298156763|gb|EFH97854.1| predicted amidase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330989018|gb|EGH87121.1| hypothetical protein PLA107_28625 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 457
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 178/408 (43%), Gaps = 55/408 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + ++PGGSSSG+AVAVA V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 182 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------- 222
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 --RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 279
Query: 286 FHKTNGELKNV--MRLIQRYEFKNNHNEWIESV------KPALDPDISAEIGEMLE---- 333
+ +G L V + Q W+ + +P LD D ++++ +
Sbjct: 280 ALRASGALIEVKPCQAFQATLLLTQQQGWLGAAEAFALHQPLLDSDAASQLDPRVRKRLE 339
Query: 334 ----ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEMLSEDY 385
+ +++ N + R ++ + +L D +L+TPT A+ PP P L +E+ +
Sbjct: 340 AARHMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLVPLLNDEELFIQ-- 396
Query: 386 QNRAFSLLSI-ASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLL 431
N A L++ S+ V++P G PT+V A G D LL
Sbjct: 397 TNLATLRLTMPGSLLNMPGVSLPSGSDASGLPTAVLLSAPAGEDARLL 444
>gi|416407874|ref|ZP_11688328.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Crocosphaera watsonii WH 0003]
gi|357260813|gb|EHJ10162.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Crocosphaera watsonii WH 0003]
Length = 455
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 165/376 (43%), Gaps = 22/376 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
LTG+ FAV +LFDIEG +T G + + +S A+ +T + L GA +G +DE+A
Sbjct: 71 LTGVPFAVKNLFDIEGIITLAGS-KINKENSPATEDATAIKKLKAAGAILVGALNMDEYA 129
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP S++ GGSS G+A AVAA LV FSLG DT G +RVP+A CG+
Sbjct: 130 YGFVTENSHYGATPNPHDLSRISGGSSGGSAAAVAASLVPFSLGSDTNGSIRVPAALCGV 189
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G +P+YG +S G S SLD +G F R +R + + L Q P +
Sbjct: 190 FGLKPTYGRLSRAGTFLFSNSLDHIGGFTRS---VRDMAAIFDVLQGEDQDDPVCTYLPP 246
Query: 238 D-CFELLKIPADRVVQVVIKS--TEKLFGRQVLKHENLGEYFDSK-VPSLKGFHKTNGEL 293
CF+ L D + V E + E + + ++K + S+ H+
Sbjct: 247 QLCFDKLNDGIDGLTIAVAGDYFQEGAETAALEAVETIAKLLNTKEIISIPEAHRA---- 302
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+ +I E N H E + S DP I T + R R +
Sbjct: 303 RAAAYIITACEGSNFHLENLRSRPQDFDPATRDRFLAGAFIPNTWYIQAQRFRRWYRDQV 362
Query: 354 SSLLKDDGILVTPTTAYPPPKLG-------GKEMLSEDYQNRAFSLLSIASVSGCCQVTV 406
+ + +++ PTT LG G+E+L R LS G V+
Sbjct: 363 KEIFQKVDVIIAPTTPCVATTLGQEKMMINGEEILIRPNLGRFTQPLSFI---GLPVVSF 419
Query: 407 PLGYYDKCPTSVSFIA 422
P+ +K P V IA
Sbjct: 420 PILRANKLPLGVQLIA 435
>gi|316935070|ref|YP_004110052.1| amidase [Rhodopseudomonas palustris DX-1]
gi|315602784|gb|ADU45319.1| Amidase [Rhodopseudomonas palustris DX-1]
Length = 449
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 175/406 (43%), Gaps = 41/406 (10%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFDI+G VT G + A + V+ L G IG++ +
Sbjct: 67 APSPFAGIPISIKDLFDIKGQVTRAGS-RALDDNPPADSDAPAVARLRRAGFVVIGRSNM 125
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQ----MPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
EFAYS G N HY TP AA + +PGGSSSGAAV+VA + LG DT G R
Sbjct: 126 TEFAYSGIGINPHYGTPK--AAYRRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCR 183
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA--Q 227
+P+AF GI+G++PS V G +P+S SLD++G AR + +L P
Sbjct: 184 IPAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLARSVACCATLDAILADQPVGPLIA 243
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGF 286
R P+ + IA +P + + + F R + + G + +VP
Sbjct: 244 RPPKGMRIA--------VPTTVALDGLDAAVTAAFDRALKTLTSHGAIIEKIEVPEFAEV 295
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKS 344
K + Y + H I + DP + I GE ++ V + +
Sbjct: 296 APLGA--KGGFAAAESYAW---HRFLIVAQGDVYDPRVRERILRGETQSAADYV--DLVN 348
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC--- 401
R + + S+ L + PTTA P ++E ++AF+ ++ ++ C
Sbjct: 349 ARKSLIARASARLAPYDAVAMPTTAIAAPT------IAELADDKAFTKANLLTLRNCTLI 402
Query: 402 -----CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +++P P + +G DR + + + A ++
Sbjct: 403 NMIDGCAISLPCHQDGVPPIGLMLAGVNGADREIFEVAAGLEAVIR 448
>gi|21229770|ref|NP_635687.1| amidase [Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66766646|ref|YP_241408.1| amidase [Xanthomonas campestris pv. campestris str. 8004]
gi|21111262|gb|AAM39611.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66571978|gb|AAY47388.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
campestris str. 8004]
Length = 486
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 165/380 (43%), Gaps = 40/380 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ F V DLFD+ G VT G A++ + A+R + VV L + GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAALRAQS-APATRDAAVVQRLSDAGAVLVGTANMDEFA 166
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY T NP + GGSS G+A AVAA V F+LG DT G +RVP+A CG+
Sbjct: 167 YGFATVNAHYGTTANPHDHRHLAGGSSGGSAAAVAAGWVPFALGSDTNGSIRVPAALCGV 226
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++G + G+ P +LD VG FA LR V V+ P
Sbjct: 227 YGLRPTHGTLPLQGVFPFVDALDVVGPFATSVADLRRVYEVMHGHP-------------- 272
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--HKTNGELKN 295
+PA V + I F R NL ++ + +L T EL +
Sbjct: 273 -------VPACSVETLRIAQLGGWFQR------NLDPELEAGLGTLLTAIGSTTIMELPD 319
Query: 296 VMR------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
R ++ E + H + + DP + L++ + + + + +
Sbjct: 320 AERARAAAFVLTAAEGGHRHRNALSTQAAQFDPATRDRLLAGLQLPASAVADAQQFAHWF 379
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----VSGCCQVT 405
A+ +L +L+ P T P++ + ++ + A + L I + ++ C +
Sbjct: 380 ARAMRTLWDRVDVLIAPATPGVAPRIDQESIIIDGLPVSARANLGIFTQPLGLAACPVLA 439
Query: 406 VPLGYYDKCPTSVSFIARHG 425
PL + P V IA G
Sbjct: 440 APLPRPGRLPLGVQLIAAPG 459
>gi|192290373|ref|YP_001990978.1| amidase [Rhodopseudomonas palustris TIE-1]
gi|192284122|gb|ACF00503.1| Amidase [Rhodopseudomonas palustris TIE-1]
Length = 449
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 175/404 (43%), Gaps = 37/404 (9%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFDI+G VT G + A + V+ L G IG+T +
Sbjct: 67 APSPFAGIPISIKDLFDIKGQVTRAGS-RALDDNPPADSDAPAVARLRRAGFVVIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQ----MPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
EFAYS G N HY TP AA + +PGGSSSGAAV+VA + LG DT G R
Sbjct: 126 TEFAYSGIGINPHYGTPK--AAYRRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCR 183
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+P+AF GI+G++PS V G +P+S SLD++G AR + + +L P
Sbjct: 184 IPAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLARGVECCATLDAILADQPVG---- 239
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
+I+ + +P + + + F R + + G + +VP
Sbjct: 240 --PLIVRPLKGMRIAVPTTVALDDLDAAVTAAFERALKTLASHGAIIEKIEVPEFAEVGP 297
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIR 346
K + Y + H I + DP + I GE ++ V + + R
Sbjct: 298 LGA--KGGFAAAESYAW---HRYLIVAQGDVYDPRVRERILRGETQSAADYV--DLVNAR 350
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC----- 401
+ + S+ L + PTTA P ++E ++AF+ ++ ++ C
Sbjct: 351 KSLIARASARLAPYDAVAMPTTAIAAPT------IAELADDKAFTKANLLTLRNCTLINM 404
Query: 402 ---CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +++P + P + +G DR + + M A ++
Sbjct: 405 IDGCAISLPCHQDGEPPIGLMLAGVNGTDREIFEVAAGMEAVIR 448
>gi|126657391|ref|ZP_01728550.1| amidase [Cyanothece sp. CCY0110]
gi|126621378|gb|EAZ92090.1| amidase [Cyanothece sp. CCY0110]
Length = 457
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
LTG+ FAV +LFDIEG +T G + + ++ A++ +T + L GA +G +DE+A
Sbjct: 71 LTGVPFAVKNLFDIEGVITLAGS-KINQENAPATQDATAIKKLKAAGAILVGALNMDEYA 129
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP S++ GGSS G+A AVAA+LV FSLG DT G VRVP+A CG+
Sbjct: 130 YGFVTENSHYGATPNPHNLSRISGGSSGGSAAAVAANLVPFSLGSDTNGSVRVPAALCGV 189
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
G +P+YG +S G + S SLD +G F R + + + +L
Sbjct: 190 FGLKPTYGRLSRTGTVLFSNSLDHIGGFTRSVRDMAAIFDIL 231
>gi|67925167|ref|ZP_00518538.1| Amidase [Crocosphaera watsonii WH 8501]
gi|67852993|gb|EAM48381.1| Amidase [Crocosphaera watsonii WH 8501]
Length = 455
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 166/378 (43%), Gaps = 26/378 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
LTG+ FAV +LFDIEG +T G + + +S A+ +T + L GA +G +DE+A
Sbjct: 71 LTGVPFAVKNLFDIEGIITLAGS-KINKENSPATEDATAIKKLKAAGAILVGALNMDEYA 129
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP S++ GGSS G+A AVAA LV FSLG DT G +RVP+A CG+
Sbjct: 130 YGFVTENSHYGATPNPHDLSRISGGSSGGSAAAVAASLVPFSLGSDTNGSIRVPAALCGV 189
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL---QLPFAAQRSPRQII 234
G +P+YG +S G S SLD +G F R + + + VL Q P Q+
Sbjct: 190 FGLKPTYGRLSRAGTFLFSNSLDHIGGFTRSVRDMAAIFDVLQGEDQDDPVCTSLPPQL- 248
Query: 235 IADDCFELLKIPADRVVQVVIKS--TEKLFGRQVLKHENLGEYFDSK-VPSLKGFHKTNG 291
CF+ L D + V E + E + + ++K + S+ H+
Sbjct: 249 ----CFDKLNDGIDGLTIAVAGDYFQEGAETAALEAVETIAKLLNTKEIISIPEAHRA-- 302
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ +I E N H E + S DP I T + R R
Sbjct: 303 --RAAAYIITACEGSNFHLENLRSRPQDFDPATRDRFLAGAFIPNTWYIQAQRFRRWYRD 360
Query: 352 AISSLLKDDGILVTPTTAYPPPKLG-------GKEMLSEDYQNRAFSLLSIASVSGCCQV 404
+ + + +++ PTT LG G+E+L R LS G V
Sbjct: 361 QVKEIFQKVDVIIAPTTPCVATTLGQEKMMINGEEILIRPNLGRFTQPLSFI---GLPVV 417
Query: 405 TVPLGYYDKCPTSVSFIA 422
+ P+ +K P V IA
Sbjct: 418 SFPILRANKLPLGVQLIA 435
>gi|373458897|ref|ZP_09550664.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Caldithrix abyssi
DSM 13497]
gi|371720561|gb|EHO42332.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Caldithrix abyssi
DSM 13497]
Length = 472
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PLTG+ A+ D +I G T S +TV+ L + GA IGKT +D
Sbjct: 62 PGPLTGVIMAIKDNINIAGERTTCASKILETFVSPFD--ATVIQRLRDAGAIFIGKTNMD 119
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA + N H+ NP PS + GGSS G+AVAVA D +LG +T G +R P++F
Sbjct: 120 EFAMGSSSENSHFGAVKNPLNPSYVAGGSSGGSAVAVAIGACDAALGSETGGSIRQPASF 179
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
G++G +P+YG VS G++ ++SLD +G FAR+ +
Sbjct: 180 TGLVGVKPTYGRVSRYGLVAYASSLDQIGVFARNVR 215
>gi|416014913|ref|ZP_11562630.1| hypothetical protein PsgB076_06135 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320325581|gb|EFW81643.1| hypothetical protein PsgB076_06135 [Pseudomonas syringae pv.
glycinea str. B076]
Length = 459
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 178/408 (43%), Gaps = 55/408 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 70 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 123
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + ++PGGSSSG+AVAVA V ++G DT
Sbjct: 124 LGKTNLSEFAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTA 183
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 184 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------- 224
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 225 --RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 281
Query: 286 FHKTNGELKNV--MRLIQRYEFKNNHNEWIESV------KPALDPDISAEIGEMLE---- 333
+ +G L V + Q W+ + +P LD D ++++ +
Sbjct: 282 ALRASGALIEVKPCQAFQATLLLTQQQGWLGAAEAFALHQPLLDSDAASQLDPRVRKRLE 341
Query: 334 ----ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEMLSEDY 385
+ +++ N + R ++ + +L D +L+TPT A+ PP P L +E+ +
Sbjct: 342 AARHMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLVPLLNDEELFIQ-- 398
Query: 386 QNRAFSLLSI-ASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLL 431
N A L++ S+ V++P G PT+V A G D LL
Sbjct: 399 TNLATLRLTMPGSLLNMPGVSLPSGSDASGLPTAVLLSAPAGEDARLL 446
>gi|421139242|ref|ZP_15599284.1| hypothetical protein MHB_08126 [Pseudomonas fluorescens BBc6R8]
gi|404509617|gb|EKA23545.1| hypothetical protein MHB_08126 [Pseudomonas fluorescens BBc6R8]
Length = 441
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 93/160 (58%), Gaps = 6/160 (3%)
Query: 53 KAPHPLT---GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
+A PL+ G+ A DLFD+ G +T G + R A + V L G +G
Sbjct: 50 RAGQPLSVFDGVPLAWKDLFDVAGSITTAGA-AYRRNAPAVLLDAPSVGLLCRAGMVSVG 108
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
KT + E AYS G N H+ TP NPA+ Q +PGGSSSG+AVAVAA +V ++G DT G
Sbjct: 109 KTNLSELAYSGLGLNPHFGTPHNPASVDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGS 168
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+R+P+A G++G+R S S G+ P++ +LD++G R
Sbjct: 169 IRIPAALNGVVGYRSSCRRYSRDGVFPLAHTLDSLGPLTR 208
>gi|209963508|ref|YP_002296423.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Rhodospirillum
centenum SW]
gi|209956974|gb|ACI97610.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative
[Rhodospirillum centenum SW]
Length = 461
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 8/151 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTH--SAASRTSTVVSTLVEGGATCIGKTVVD 114
PL G + AV DLFD+ G T G ART A T+T + L+ G +GK
Sbjct: 65 PLAGRTLAVKDLFDLRGVPTAAG----ARTPVVDEAPATATALDHLLRAGMIPLGKAATV 120
Query: 115 EFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
E A+ G N+ TP NP +++PGGSSSG+AVAVAA L D +LG DT G +R+P
Sbjct: 121 ELAFGTWGINRATGTPRNPWDMTVARVPGGSSSGSAVAVAAGLADMALGSDTGGSIRIPC 180
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVG 203
A GI G + + G VS G++P+S +LDTVG
Sbjct: 181 ALNGISGIKTTVGRVSRAGVVPLSPTLDTVG 211
>gi|229589499|ref|YP_002871618.1| hypothetical protein PFLU1992 [Pseudomonas fluorescens SBW25]
gi|229361365|emb|CAY48235.1| putative amidase [Pseudomonas fluorescens SBW25]
Length = 452
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 187/408 (45%), Gaps = 55/408 (13%)
Query: 53 KAPHPLT---GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
KA PL+ G+ A DL+D+ GYVT G T A+ + V+ L G IG
Sbjct: 57 KAGQPLSRFDGVPVAWKDLYDLAGYVTTAGAKVLLHTPPASHDCALAVA-LSRAGLVSIG 115
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQM--PGGSSSGAAVAVAADLVDFSLGIDTVGG 167
KT + E AYS G N H+ TP N A+ ++ PGGSSSG+A+AVA +V ++ DT G
Sbjct: 116 KTNLSELAYSGLGLNPHFGTPVNAASKDEVRVPGGSSSGSAIAVARGIVPIAMSTDTAGS 175
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL------- 220
+RVP+AF G++G+R S S G++P++ +LD++G + V ++LL
Sbjct: 176 IRVPAAFNGLVGYRSSSRRYSFAGVMPLARTLDSLGPITHSVRDAIAVDNLLLGDRRGLS 235
Query: 221 ----QLPFAAQRSPRQIIIADDCFELLKI-PADRVVQVVIKSTEKLFGRQVLKHENLGEY 275
LP A R I + +D +I PA R ++ + EKL L
Sbjct: 236 FETTGLPVAGLRLRVDIKVLNDT----RIQPAVR--SNLLTAVEKL---------ALAGA 280
Query: 276 FDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPA---LDPDISAEIGEML 332
+ P L FH+ ++ V L F H E ++S PA LDP + + L
Sbjct: 281 VIEETPVL-AFHQALELIEQVGWLGSAEAFA-LHQELLDS--PAAEQLDP----RVRKRL 332
Query: 333 EISETVIENCKSIR-----NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN 387
E + T K +R ++ I+S L D L+TPT A+ P L E + +
Sbjct: 333 ETART-FPASKQVRLYQAAEALKKQITSEL-DGAFLITPTVAHVAPLLTPLEEDASIFAA 390
Query: 388 RAFSLLSI---ASVSGCCQVTVPLGYYDK-CPTSVSFIARHGGDRFLL 431
+ L + S+ V +P G D PTS+ + G D LL
Sbjct: 391 TNLATLRLTMPGSMLDMPGVALPSGIGDAGMPTSLLLSSFSGNDEELL 438
>gi|21241080|ref|NP_640662.1| amidase [Xanthomonas axonopodis pv. citri str. 306]
gi|21106376|gb|AAM35198.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas axonopodis pv.
citri str. 306]
Length = 470
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ F V DLFD+ G VT G R H ASR + VV L E GA +G +DEF
Sbjct: 92 LAGVPFVVKDLFDVAGQVTTAG--AAVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 149
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG
Sbjct: 150 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 209
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
I G RP++GAV G+ P +LD VG FA LR V VL P
Sbjct: 210 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCVYDVLRGQPL 257
>gi|339325668|ref|YP_004685361.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
gi|338165825|gb|AEI76880.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
Length = 454
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 178/397 (44%), Gaps = 62/397 (15%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
HPL GL +V DL+D+ G VT + + A+ +TVV+ L GA +G+T + E
Sbjct: 68 HPLAGLPVSVKDLYDVAGEVTSAAS-LVRKDAAPATADATVVARLRAAGAALVGRTNMTE 126
Query: 116 FAYSINGTNKHYDTPTNPAAP---SQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
FA+S G N HY TP NPA +++PGGSSSGAAV+VA L +LG DT G +R+P+
Sbjct: 127 FAFSGVGINPHYGTPVNPAGTDGVARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIPA 186
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR-------------DPKILRHVGHVL 219
A CGI GF+P+ V G P+S +LDT AR D ++ V +
Sbjct: 187 ALCGITGFKPTTRRVPLTGAFPLSYTLDTACAMARTVSDCIAMDSVIADSAVIPRVTN-- 244
Query: 220 LQLPFAAQRS-PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-----LKHENLG 273
P A + + PRQ+++ D + VV ++ ++ GR L+H +L
Sbjct: 245 ---PAATRLAIPRQVLL------------DDLDPVVARAFDRALGRLSAAGVQLEHVDLP 289
Query: 274 EYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE 333
E + L G + G E H + + DP +++ I
Sbjct: 290 ELGE-----LAGLNAQGG--------FSSAEAFAIHRHLLAGRRELYDPRVASRIDRGAN 336
Query: 334 ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL 393
IS + R + + + + L +V PT P++ + ++D Q + L
Sbjct: 337 ISAADYIDLGRARLDWIARMQARLARFDAVVCPTVPMVAPEIA--PLRTDDAQFFRVNAL 394
Query: 394 SIASVSG-----CCQVTVPLGYYDKCPTSVSFIARHG 425
+ + S C +++P D+ P V + HG
Sbjct: 395 LLRNTSAFNFLDGCSISMPCHAPDELP--VGLMLSHG 429
>gi|416028865|ref|ZP_11571754.1| hypothetical protein PsgRace4_25331 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320327132|gb|EFW83146.1| hypothetical protein PsgRace4_25331 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 457
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 178/408 (43%), Gaps = 55/408 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVLIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + ++PGGSSSG+AVAVA V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 182 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------- 222
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 --RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 279
Query: 286 FHKTNGELKNV--MRLIQRYEFKNNHNEWIESV------KPALDPDISAEIGEMLE---- 333
+ +G L V + Q W+ + +P LD D ++++ +
Sbjct: 280 ALRASGALIEVKPCQAFQATLLLTQQQGWLGAAEAFALHQPLLDSDAASQLDPRVRKRLE 339
Query: 334 ----ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEMLSEDY 385
+ +++ N + R ++ + +L D +L+TPT A+ PP P L +E+ +
Sbjct: 340 AARHMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLVPLLNDEELFIQ-- 396
Query: 386 QNRAFSLLSI-ASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLL 431
N A L++ S+ V++P G PT+V A G D LL
Sbjct: 397 TNLATLRLTMPGSLLNMPGVSLPSGSDASGLPTAVLLSAPAGEDARLL 444
>gi|433605728|ref|YP_007038097.1| putative indoleacetamide hydrolase [Saccharothrix espanaensis DSM
44229]
gi|407883581|emb|CCH31224.1| putative indoleacetamide hydrolase [Saccharothrix espanaensis DSM
44229]
Length = 444
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 190/397 (47%), Gaps = 23/397 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F+V D D+ G T G P S A+ +TVVS L GA +GKT + E
Sbjct: 56 PLAGVPFSVKDNVDVRGVPTTAGSPLL--DDSPAAVDATVVSALRAAGAVVVGKTNLHEL 113
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+ I NK + NPA P + GGSS G+AV VA +V F+LG DT G V VP++FCG
Sbjct: 114 AFGITSNNKAFGPVRNPADPDRSAGGSSGGSAVGVALGVVPFALGTDTGGSVTVPASFCG 173
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA--AQRSPRQII 234
++GFRPS G G++ +STS DT+G AR + +R V V+ P A + +I
Sbjct: 174 VVGFRPSTGRYPGDGVVNLSTSRDTIGVHARVVRDVRTVDRVITGEPDAPPVTLAGLRIG 233
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+ F L V V+ + E+ L +LG+ D +V + G E
Sbjct: 234 LPRSRFRHLDPEVAAAVDEVLSTLEQAGAH--LVEVDLGD--DVQVAAGAGNDLVFFEAP 289
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE--ISETVIENCKSIRNEMRSA 352
RL+ R ++ W E V + PD+ A +G M ++ E+ ++ R +R A
Sbjct: 290 ---RLLAR-RVRSAVERWPERV---VSPDVRALVGLMASAPVTADAYEDARAARWRLRRA 342
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN-RAFSLLS----IASVSGCCQVTVP 407
+ + +++ PT PP LG E+++ + Q F ++ +V+G +++P
Sbjct: 343 YAEVFARVDVVLGPTAPVLPPLLGEDEVITHNGQQVPVFPTVTRNVGPGTVAGLPMLSLP 402
Query: 408 LGY-YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
G P V A GD LL + + +L+E
Sbjct: 403 AGRSRTGLPVGVCLEAHPFGDTRLLRVAEAVQDALRE 439
>gi|422680715|ref|ZP_16738986.1| hypothetical protein PSYTB_10263 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331010060|gb|EGH90116.1| hypothetical protein PSYTB_10263 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 457
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 178/408 (43%), Gaps = 55/408 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTPGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + ++PGGSSSG+AVAVA V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 182 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLT------------------- 222
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 223 --RSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 279
Query: 286 FHKTNGELKNV--MRLIQRYEFKNNHNEWIESV------KPALDPDISAEIGEMLE---- 333
+ +G L V + Q W+ + +P LD D ++++ +
Sbjct: 280 ALRASGALIEVKPCQAFQATLLLTQQQGWLGAAEAFALHQPLLDSDAASQLDPRVRKRLE 339
Query: 334 ----ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAY--PP--PKLGGKEMLSEDY 385
+ +++ N + R ++ + +L D +L+TPT A+ PP P L +E+ +
Sbjct: 340 AARHMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLVPLLNDEELFIQ-- 396
Query: 386 QNRAFSLLSI-ASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLL 431
N A L++ S+ V++P G PT+V A G D LL
Sbjct: 397 TNLATLRLTMPGSLLNMPGVSLPSGSDASGLPTAVLLSAPAGEDARLL 444
>gi|408377409|ref|ZP_11175010.1| allophanate hydrolase [Agrobacterium albertimagni AOL15]
gi|407748400|gb|EKF59915.1| allophanate hydrolase [Agrobacterium albertimagni AOL15]
Length = 600
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL G+ FAV D ++ G T P++ AA+ + VV+ L GA IGKT +D+
Sbjct: 66 RPLYGIPFAVKDNINVAGMPTTCACPDF---EYAATADAFVVAKLKAAGALPIGKTNLDQ 122
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + G Y P N PS +PGGSSSG+AVAVA +V F+LG DT G RVP+A
Sbjct: 123 FATGLVGIRSPYTIPRNAIDPSIVPGGSSSGSAVAVARGIVPFALGTDTAGSGRVPAALN 182
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +P+ G +S G++P +LDT+ FA
Sbjct: 183 NIVGLKPTLGTLSATGMVPACRTLDTISIFA 213
>gi|427821143|ref|ZP_18988206.1| putative amidase [Bordetella bronchiseptica D445]
gi|410572143|emb|CCN20407.1| putative amidase [Bordetella bronchiseptica D445]
Length = 439
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 152/355 (42%), Gaps = 28/355 (7%)
Query: 89 AASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSG 146
AA R + VV L GA +G+T + EFAYS G N HY TP NP A ++PGGSSSG
Sbjct: 89 AAVRDAVVVRRLRAAGAVIVGRTNMTEFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSG 148
Query: 147 AAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
AAV+V + ++G DT G VR+P+A CG+ GF+PS VS G++P+S +LD++G A
Sbjct: 149 AAVSVTDGMASGAIGSDTGGSVRIPAALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 208
Query: 207 RDPKILRHVGHVL-----LQLPF-AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEK 260
+ + +L +P AA R R L +P + +
Sbjct: 209 PSVRCCATLDAILAGGDDADMPAPAALRGLR-----------LAVPTTLALDGLDAHVSA 257
Query: 261 LFGRQVLKHENLGEYFDS-KVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPA 319
F + K G D VP N K + + + H + IE
Sbjct: 258 TFAATLAKLAEAGACIDEIAVPEFAQLADINS--KGGFTAAEAWAW---HRDLIERAADR 312
Query: 320 LDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
DP + A I ++S + + R R+ + + + LV PT P + E
Sbjct: 313 YDPRVVARIRRGADMSAADYIDLLAARQAWRAGVEARIAGYDALVLPTVPVVAPAIADLE 372
Query: 380 MLSEDYQNRAFSLL---SIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ + +L ++ + +++P P + A +G DR +L
Sbjct: 373 ASDALFGSTNLLILRNPTLINFLDGSALSLPCHEAGTAPVGLMVAAANGSDRRVL 427
>gi|300311162|ref|YP_003775254.1| amidase [Herbaspirillum seropedicae SmR1]
gi|300073947|gb|ADJ63346.1| amidase family protein [Herbaspirillum seropedicae SmR1]
Length = 450
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +V DLFD+ G T G R AS + VV L++ GA IGKT + EF
Sbjct: 68 PLEGVPVSVKDLFDVAGETTLAGSVVL-RGKPVASAHAAVVQNLLKAGAILIGKTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNP----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
AYS G N HY TP N ++PGGSSSGAA++V + ++G DT G VR+PS
Sbjct: 127 AYSGLGINPHYGTPQNAWERNIEGGRIPGGSSSGAAISVTDGMAFAAVGSDTGGSVRIPS 186
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
A G+ GF+P+ VS G++P+S LD++G A
Sbjct: 187 ALNGLTGFKPTAARVSMQGVLPLSAYLDSIGPLA 220
>gi|299769940|ref|YP_003731966.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter oleivorans DR1]
gi|298700028|gb|ADI90593.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter oleivorans DR1]
Length = 369
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 179/392 (45%), Gaps = 54/392 (13%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + VV +++ I KT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPAQDD-AEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYSELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL--PFAAQRSPRQIIIADD 238
+P++G VS G+ P S+SLD VG FA +++ ++ P R+P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPTEFTRTPK------- 186
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD VV I Q L+ NL + KV + + ++ N
Sbjct: 187 -IAVLDVKADEVVWNCI--------HQALQKANL-QSTSEKVEHFEAAYDAGMQIIN--- 233
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAIS 354
YE N + E + L I +++ G +L+ + T +E K ++ ++ +
Sbjct: 234 ----YE---NWQAFGELTQTGL---IGSDVNGRLLKAAHTTLEQVKQAEVVKAQLTQELD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL+ LV PT PPK +SE AF L+ ++SG ++VPL
Sbjct: 284 ALLEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPVISVPLET 337
Query: 411 YDKCPTSVSFIARHGGD-------RFLLDTVQ 435
+ P + +++H D +F +D +Q
Sbjct: 338 SEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|434397558|ref|YP_007131562.1| amidohydrolase, AtzE family [Stanieria cyanosphaera PCC 7437]
gi|428268655|gb|AFZ34596.1| amidohydrolase, AtzE family [Stanieria cyanosphaera PCC 7437]
Length = 457
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 172/400 (43%), Gaps = 60/400 (15%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
K P L G+ FAV +LFD++G +T + + +S A +T ++ L + GA +G
Sbjct: 61 KHPGILAGVPFAVKNLFDVQG-ITTLAGSKINQDNSPAQEDATAIALLKQAGAILVGTLN 119
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DE+AY N HY NP S++ GGSS G+A AVAA LV +LG DT G +RVP+
Sbjct: 120 MDEYAYGFVTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPA 179
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP-- 230
A CG+ GF+P+YG +S G+ +SLD +G FAR +R V V L A + P
Sbjct: 180 ALCGVYGFKPTYGRLSRAGVFLFVSSLDHIGCFARS---VRDVAAVFDVLQGADPKDPVC 236
Query: 231 ------------------RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
+I IA D F+ P ++VV + L RQ +
Sbjct: 237 THKPIQPCLSQLEGEIDHLRIAIAGDYFQQEAEP--EALEVVATVAQALNVRQTI----- 289
Query: 273 GEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML 332
+P + K LI E N H ++S DP
Sbjct: 290 ------TIPE-------SDRAKAAAYLITASEGANLHLHNLKSRPQDFDPATRDRFLAGA 336
Query: 333 EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL-------GGKEMLSEDY 385
I + + R R + + + +++ PTT PKL GG+E+L
Sbjct: 337 LIPASWYIQAQRFRRWYRHQLQQIFQQVDLILAPTTPCVAPKLGQTKMIIGGEEVLVRPN 396
Query: 386 QNR---AFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIA 422
R FSL+ + +S VP+ K P V IA
Sbjct: 397 LGRFTQPFSLIGLPVLS------VPVLGSKKLPLGVQIIA 430
>gi|423696671|ref|ZP_17671161.1| amidase family protein [Pseudomonas fluorescens Q8r1-96]
gi|388003770|gb|EIK65097.1| amidase family protein [Pseudomonas fluorescens Q8r1-96]
Length = 461
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ A D+FD+ G T G R + A + VV L + G +GKT + EFA
Sbjct: 77 LDGVPVAWKDMFDVAGSPTTAGA-AVRRDITPALLDANVVGLLAKAGMVSVGKTNLSEFA 135
Query: 118 YSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
YS G N H+ TP NP Q +PGGSSSG+AVAVAA +V ++G DT G +R+P+AF
Sbjct: 136 YSGLGLNPHFGTPHNPVGLDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAFN 195
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G R S S G+ P++ +LD+VG R
Sbjct: 196 GLVGVRSSCRRYSREGVFPLAHTLDSVGPLTR 227
>gi|400600073|gb|EJP67764.1| glutamyl-tRNA(Gln) amidotransferase [Beauveria bassiana ARSEF 2860]
Length = 623
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 179/423 (42%), Gaps = 49/423 (11%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ V D+FDI G T G+ W + + A++T++ V LV+ GA IGK
Sbjct: 190 ADKPLAGVRLGVKDIFDIAGLKTSNGNRAWYQLYPEANQTASAVQKLVDAGAVIIGKMKA 249
Query: 114 DEFAYSINGTNK--HYDTPTNPAAPSQM-PGGSSSGAAVAVAA-DLVDFSLGIDTVGGVR 169
+FA T Y P NP + P SS+G A A+ +D +LG DT G VR
Sbjct: 250 SQFANGETATADWVDYHAPFNPRGDGYLDPSSSSAGPAAGEASYSWLDIALGSDTGGSVR 309
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
PS GI G RPS+G + +P+S DTVG ARDP + +L Q AQ S
Sbjct: 310 SPSQLQGIYGNRPSHGLAALDHTMPLSPEFDTVGLLARDPVLWADAATILYQPSIMAQSS 369
Query: 230 ---PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF------DSKV 280
P++I+ A + D+++ + S L + + NL E + S
Sbjct: 370 STYPKRILAA-GFPRATQTALDQLLHAFLHSLADLLSARNVSDFNLTERWAAGTTNPSAE 428
Query: 281 PSLKGFHKTNGEL--KNVMRLIQR---YEFKNNHNEWIESVKPALDPDISAEIGEMLEIS 335
P L + T L K RL++ ++ H+ + V PA P +G+ + +
Sbjct: 429 PLLSMINSTYEVLSAKQQARLVRDPFYADYAARHDGRLPHVNPA--PLRRWALGD--DAN 484
Query: 336 ETVIENCKSIRNEMRSAISSLLKDDG----------ILVTPTTAYPPPKLGGKEMLSEDY 385
T+ E + M+ S+LK D + TPT Y G +
Sbjct: 485 VTLEEAMANKTRFMKWFNGSVLKPDNASCSSDLFVYVPRTPTPKYRDTYWTGPQAPG--- 541
Query: 386 QNRAFSLLSIASVSGCCQVTVPLG----------YYDKCPTSVSFIARHGGDRFLLDTVQ 435
AFS I+ ++ + +P+G + + P +V +A G D L V+
Sbjct: 542 ---AFSTSRISVMAEIPDIVIPIGEVEYVSKVTNHTEYLPVTVDLMAAKGCDGMLFSLVR 598
Query: 436 NMY 438
M+
Sbjct: 599 KMH 601
>gi|392561290|gb|EIW54472.1| amidase signature enzyme [Trametes versicolor FP-101664 SS1]
Length = 661
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 4/193 (2%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G AV D++DI+G TG G+ + + + A RT+ + L++GG +GK
Sbjct: 224 PTPEKPLAGFRLAVKDIYDIKGLQTGCGNRAFWQLYPAKERTAPAIQRLLDGGMVLVGKA 283
Query: 112 VVDEFAYSINGTNKHYD--TPTNPAAPSQMPGGSSS-GAAVAVAA-DLVDFSLGIDTVGG 167
+FA T+ D P NP G SSS G A AA +DF++G DT G
Sbjct: 284 KTSQFANGETATDDWVDLHAPYNPRGDGYQDGSSSSTGPGTATAAYPWLDFAVGSDTGGS 343
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+R P+ G+ G RPS+GAV+ ++P+S LDT G FARD K+ GH Q +
Sbjct: 344 MRGPAGANGVFGNRPSHGAVALDDVMPLSPELDTAGIFARDAKLWATAGHWWYQNFTSFS 403
Query: 228 RSPRQIIIADDCF 240
+ P+++I D F
Sbjct: 404 KFPKKVIFPVDFF 416
>gi|148261754|ref|YP_001235881.1| amidase [Acidiphilium cryptum JF-5]
gi|146403435|gb|ABQ31962.1| Amidase [Acidiphilium cryptum JF-5]
Length = 453
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 168/386 (43%), Gaps = 27/386 (6%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ AV DLFD+ G T G A AA + + ++ L G IG+T +
Sbjct: 71 APSPWAGIPIAVKDLFDMAGQETRAGSKVLAGCGPAA-QDAPAIARLRRMGFVPIGRTNM 129
Query: 114 DEFAYSINGTNKHYDTPTNPA----APSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
EFAYS GTN HY TP PA ++PGGSSSG+AVAVAA + +G DT G R
Sbjct: 130 TEFAYSGIGTNPHYGTP--PARWRREERRIPGGSSSGSAVAVAAGMAHAGIGTDTGGSCR 187
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+P+ F ++GF+P+ + G++P+S+SLD+VG AR + ++ P A +
Sbjct: 188 IPAVFNDLVGFKPTARRIPREGVVPLSSSLDSVGPLARSVGCCALLDSIMAGTPEAPP-A 246
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
P ++ L +P D + + F + + G ++ +P K
Sbjct: 247 PAEL-----AGLRLAVPRDVALDTLDDEVAAGFDAALRRLSAAGARIETIAMPEFAEVAK 301
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N + E H + A DP + + E+S + + R +
Sbjct: 302 LNARGG-----LTAAESHAWHRPLLARGAEAYDPRVLVRLRRGAELSAADYIDLLAGRAD 356
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSGCCQ 403
+ + + L L+ PT A PP++ L +D A +L ++ ++ C
Sbjct: 357 LVARARARLAPHDALLMPTVAILPPRIAD---LDDDAAFTAANLRVLRNPTLINMIDGCA 413
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRF 429
+++PL P + DR+
Sbjct: 414 ISLPLNAPGAAPVGLMVCGVAETDRW 439
>gi|440742154|ref|ZP_20921483.1| hypothetical protein A988_02191 [Pseudomonas syringae BRIP39023]
gi|440377977|gb|ELQ14611.1| hypothetical protein A988_02191 [Pseudomonas syringae BRIP39023]
Length = 457
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 182/420 (43%), Gaps = 58/420 (13%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 68 QPL-----SPFDGVPIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 121
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + ++PGGSSSG+AVAVA V ++G DT
Sbjct: 122 LGKTNLSEFAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANGTVPIAMGTDTA 181
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA 225
G +RVP+A G++GFR + S G+ P++ +LD+VG
Sbjct: 182 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPL-------------------- 221
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG 285
RS R ++ DD P+ ++ + L + VL+ E + +
Sbjct: 222 -TRSVRDALVIDDLLCARSKPSS-LIPRSLAGQRFLLDQAVLEDERVTPAVRDNLLRAVE 279
Query: 286 FHKTNGELKNV---------MRLIQRYEFKNN------HNEWIES-VKPALDPDISAEIG 329
+ +G L V + L Q++ + H ++S LDP + +
Sbjct: 280 ALRASGALIEVKPCQAFQATLLLTQQHGWLGAAEAFALHQALLDSDAASQLDPRVRKRLE 339
Query: 330 EMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED----Y 385
+ +++ N + R ++ + +L D +L+TPT A+ P L +L +D
Sbjct: 340 AARSMPASLLVNLYAARERLQEQL-TLELDGALLITPTVAHVAPPLA--PLLKDDDLFVQ 396
Query: 386 QNRAFSLLSI-ASVSGCCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLD---TVQNMYAS 440
N A L++ S+ V++P G PT + A G D LL TV+++ A+
Sbjct: 397 TNLATLRLTMPGSLLNMSGVSLPSGRDASGLPTGLLLSAPAGEDARLLRAALTVESLIAA 456
>gi|344173791|emb|CCA88973.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
syzygii R24]
Length = 448
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 177/403 (43%), Gaps = 39/403 (9%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G VT G A AA+ + V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVTAAGSRALAH-QPAATSDAAAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+PSAF
Sbjct: 129 EFAFSGLGLNPHYGTPRMPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-------QLPFAAQ 227
C + GF+P+ V G +P+STSLD+ G A V VL +P A
Sbjct: 189 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQTLDTDAVPLAGL 248
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE---YFDSKVPSLK 284
R L + D V + + F R V + E+ G FD P L
Sbjct: 249 R--------------LGLTRDYVGADLDDTVTTAFERAVARLEHAGARIVRFD--FPELL 292
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS 344
+ NG + E H + + D ++A I ++S + +
Sbjct: 293 RLPEINGGGG-----LPAAEAWAWHRPHLARAEAQYDHRVAARIRRGEQMSAAAYLDVMA 347
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLL----SIASVS 399
R M +A L + + PT A PP++ E ++D Q RA +L+ S+ +
Sbjct: 348 ARERMIAAARKRLGNIDAWLMPTVAIVPPEVAPLE--ADDAQFFRANALVLRNPSVINFL 405
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +T+P+ + P +S D +L + + A+L+
Sbjct: 406 DGCALTLPVHAAGELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|339321766|ref|YP_004680660.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
gi|338168374|gb|AEI79428.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
Length = 447
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 173/403 (42%), Gaps = 39/403 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH---PEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL G+ +V DLFD++G VT G PE AAS + ++ L GA +G+T +
Sbjct: 67 PLAGVPVSVKDLFDVQGDVTRAGARVLPE-----RAASADAPAIARLRAAGAVFVGRTNM 121
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP NP ++PGGSSSGAAV+V + ++G DT G R+P
Sbjct: 122 TEFAYSGVGINPHYGTPRNPYDRQAGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSCRIP 181
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A CGI GF+P+ V G +P+S S D+VG A + V+
Sbjct: 182 AALCGIAGFKPTARRVPLQGTVPLSPSYDSVGCLANTVACCAAIDAVMAG-------EAP 234
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEY-----FDSKVPSLKGF 286
A L +P+ V++ + ++F R + + G FDS L G
Sbjct: 235 PAGPAPLAGLRLAVPSGLVLEGMSDEVAEVFSRTLRRLSAAGALLQDVSFDSW-DQLAGI 293
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI- 345
G + E H + DP + + I L + + + +
Sbjct: 294 GANGGLVA--------AEASAWHGSLLAEQADRYDPRVLSRI--RLADGQRAADYLRMLQ 343
Query: 346 -RNEM-RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL--SIASVSGC 401
R E+ R A + L D + V PT P++ + ++ L +IA++
Sbjct: 344 RRGELCRQADAELAGFDAV-VLPTVPVVAPRIANLDDDEAFFRTNRLLLRNPAIANMLDL 402
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
C ++VP P + RH DR LL + A+L+ +
Sbjct: 403 CALSVPCHRLGDAPVGLMLFGRHLSDRRLLAIGMGIEAALRHE 445
>gi|427427139|ref|ZP_18917184.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Caenispirillum
salinarum AK4]
gi|425883840|gb|EKV32515.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Caenispirillum
salinarum AK4]
Length = 455
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL +V DLFD++G VT G A A+ + V L GA +G+T + EF
Sbjct: 70 PLLGLPVSVKDLFDVKGQVTAAGSVVRA-DDPPATADAPAVRRLRAAGAVVVGRTNMTEF 128
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+S G N H+ TP NP A ++PGGSS+GAAV+V + +LG DT G VR+P+
Sbjct: 129 AFSGVGLNPHHGTPRNPWDRATGRIPGGSSAGAAVSVTDGMAAAALGTDTGGSVRIPAGL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
CG+ GF+P+ V G P+S ++D+VG A
Sbjct: 189 CGLAGFKPTQARVPRDGAFPLSYAMDSVGPLA 220
>gi|398827651|ref|ZP_10585859.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
gi|398219365|gb|EJN05848.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
Length = 371
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
TGL A+ D DI G T G T +AA+ V +++ G +GKTV E A+
Sbjct: 14 TGLRVAIKDTIDIAGLPTRAGCRALDSTPAAAANAVVV-DLILDAGCRIVGKTVPHELAF 72
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N TP NP P +PGGSSSG+AVAVA D ++G DT G +R+P+A C +
Sbjct: 73 GVTGINDWAGTPQNPKFPDLIPGGSSSGSAVAVAEGSADVAIGTDTGGSIRIPAACCSVW 132
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G +P++G VS G++P T+LD VG FAR
Sbjct: 133 GLKPTFGRVSRKGVMPERTTLDCVGPFAR 161
>gi|421900087|ref|ZP_16330450.1| amidase protein [Ralstonia solanacearum MolK2]
gi|206591293|emb|CAQ56905.1| amidase protein [Ralstonia solanacearum MolK2]
Length = 393
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 176/405 (43%), Gaps = 43/405 (10%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G V+ G A A+ + V+ L GA +G+T +
Sbjct: 15 PSLLAGLPVSIKDLFDVAGQVSAAGSRALAH-QPPAAADAVAVARLRAAGAVLLGRTNMS 73
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP P ++ GGS+SG AV VA + +LG DT G +R+P+AF
Sbjct: 74 EFAFSGLGLNPHYGTPRTPVDGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAF 133
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-------QLPFAAQ 227
C + GF+P+ V G +P+STSLD+ G A V VL +P A
Sbjct: 134 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGL 193
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEY---FDSKVPSLK 284
R L + D V + + F R V++ E G + FD P L
Sbjct: 194 R--------------LGLTRDYVGADLDDTVVTAFERAVMRLEQAGAHIVRFD--FPELL 237
Query: 285 GFHKTN--GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
+ N G L E H + + D ++A I +++ +
Sbjct: 238 QLPEINSGGGLPAA-------ESWAWHRPHLARAEAQYDRRVAARIRRGEQMTAAAYLDV 290
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLL----SIAS 397
+ R M +A L + + PT A PP++ E ++D Q R +L+ S+ +
Sbjct: 291 MAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLE--ADDTQFFRTNALVLRNPSVIN 348
Query: 398 VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +T+P+ D+ P +S D +L + + A+L+
Sbjct: 349 FLDGCALTLPIHADDELPVGLSLCGLADDDARILRVGRAVEAALR 393
>gi|393760040|ref|ZP_10348852.1| amidase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393161852|gb|EJC61914.1| amidase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 391
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 164/347 (47%), Gaps = 33/347 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFG-HPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL GLSF V D+ D++G T +G H AR A + V+ L GA +GKTV E
Sbjct: 35 PLAGLSFGVKDVLDVQGMPTRYGAHFPDARP---AQHDAACVAVLRRAGAIPVGKTVTAE 91
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FAY+ G + NP PGGSSSG+A AVAA +VDF+LG T G + P+AF
Sbjct: 92 FAYAAPGPTR------NPLNLEHTPGGSSSGSAAAVAAGMVDFALGTQTGGSMMRPAAFT 145
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
GI+GF+PS+GA+ G+ + SLDT+G+F+RD +LR V VL LP + +I +
Sbjct: 146 GIVGFKPSFGAIHRSGLFLLCDSLDTIGYFSRDLSVLRRVTTVLQGLPDVKVPACPRIGV 205
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
D + + + + + L E G + ++P+ + +LK
Sbjct: 206 LD----------GKDLGPITPAALAALEQGCLHLEQQGAQLE-RLPA-------DPQLKE 247
Query: 296 VMRL---IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
++ L I YE + ++ AL P I + LE+ ++ R ++++
Sbjct: 248 LLILQGQIMAYEMARSLLPVWQASPNALRPITVQAIKQGLELPPADYHAWQARRRQLQTE 307
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVS 399
L+TP P P G + NR +SLL ++S
Sbjct: 308 WQDRYAHFDALLTPAAPGPAPY--GLDSTGSSILNRPWSLLGWPTLS 352
>gi|365880052|ref|ZP_09419438.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 375]
gi|365291934|emb|CCD91969.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 375]
Length = 450
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 176/390 (45%), Gaps = 29/390 (7%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFDI+G VT G + A + V+ L + G IG+T +
Sbjct: 68 APSPYAGIPVSIKDLFDIKGQVTRAGS-RALEDSAPADADAPAVARLRKAGFVVIGRTNM 126
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP + +PGGSSSGAAV+V + +LG DT G R+P
Sbjct: 127 TEFAYSGIGINPHYGTPKSAWKRDVGYVPGGSSSGAAVSVVDRMAYGALGTDTGGSCRIP 186
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFA--AQRS 229
+AF GI G++P+ V G +P+ST+LD+ G A + VL P R
Sbjct: 187 AAFNGITGYKPTQSRVPLDGGVPLSTTLDSFGPLANTVACCAVLDSVLADEPIRPLVARP 246
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQ--VLKHENLGEYFDSKVPSLKGFH 287
+ + +A +L V Q ++ E L RQ +++ E+ D + +KG
Sbjct: 247 VKGLRLAVPTTVVLDELDAEVAQTFERALETL-ARQGALIERIEFPEFLDVGIIGIKGGF 305
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSI 345
+ Y + H + + DP +S I GE + + + IE +
Sbjct: 306 AAA----------ESYAW---HRFLLTAKGDVYDPRVSVRIARGEAITVPD-YIEMLNAR 351
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS---IASVSGCC 402
R+ ++ A + + D LV PTTA PPK+ + + SL + I + GC
Sbjct: 352 RSLVKRAAARIAPYDA-LVMPTTANAPPKIADLADDAAFARENIRSLRNCTFINMIDGCA 410
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
+++P + + P + DR LL+
Sbjct: 411 -ISLPAHRHGEVPVGLMLAQSGVQDRKLLE 439
>gi|212529978|ref|XP_002145146.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Talaromyces
marneffei ATCC 18224]
gi|210074544|gb|EEA28631.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Talaromyces
marneffei ATCC 18224]
Length = 1144
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL G+ AV D+FDIEG T G W + A+ TS VV+ LV+ GA +GK +
Sbjct: 713 QPLAGVRLAVKDIFDIEGIHTSAGSRAWYHFYPPANATSPVVNALVDAGAIIVGKVKTSQ 772
Query: 116 FAYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVP 171
FA T Y +P NP Q P SS+GA V +A+ D +D +LG DT G +R P
Sbjct: 773 FANGQLATADWIDYHSPFNPRGDGYQQPFSSSTGAGVGIASYDWLDLALGTDTGGSIRFP 832
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
S G+ G R S+GA ++P++ DT G AR+P + + ++
Sbjct: 833 SQANGVFGIRASHGAAKLEAVVPLAPQFDTAGLIARNPAVWKAASQII 880
>gi|418518063|ref|ZP_13084216.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
gi|410705213|gb|EKQ63691.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
Length = 486
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ F V DLFD+ G VT G R H ASR + VV L E GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAG--AAVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
I G RP++GA+ G+ P +LD VG FA LR V VL P
Sbjct: 226 IYGLRPTHGALPLDGVFPFVDALDVVGPFATSVADLRCVYDVLRGQPL 273
>gi|121999140|ref|YP_001003927.1| allophanate hydrolase [Halorhodospira halophila SL1]
gi|121590545|gb|ABM63125.1| Amidase [Halorhodospira halophila SL1]
Length = 596
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 124/248 (50%), Gaps = 18/248 (7%)
Query: 38 IEKLQLLPPPQPLPPKAPH--PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTST 95
+++ QL +PL + P PL G+ FA+ D D+ G T G P++A T ++
Sbjct: 43 LDEDQLAAYTRPLEDRDPAELPLYGVPFAIKDNIDLAGVPTTAGCPDYAYTPET---SAF 99
Query: 96 VVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADL 155
VV L++ GA +GKT +D+FA + GT Y N + GGSSSG+A+A A
Sbjct: 100 VVQRLIDAGAVPVGKTNLDQFATGLVGTRSPYGACPNAFHRDYIAGGSSSGSALATALGQ 159
Query: 156 VDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV 215
V F+LG DT G RVP+AF ++G +P+ G +S G++P SLDTV FA
Sbjct: 160 VPFALGTDTAGSGRVPAAFNNLIGLKPTCGRLSTRGVVPACRSLDTVSIFA---GTASDA 216
Query: 216 GHVLLQL-------PFAAQRSPRQI---IIADDCFELLKIPADRVVQVVIKSTEKLFGRQ 265
GH+L P+A + P + I F P+++ ++T LF R
Sbjct: 217 GHILAAAGAYDATDPYARRAQPPALGPGRIPAHGFRFAVPPSEQCAFFGNEATPGLFERA 276
Query: 266 VLKHENLG 273
V + + LG
Sbjct: 277 VARLQALG 284
>gi|326405249|ref|YP_004285331.1| putative amidase [Acidiphilium multivorum AIU301]
gi|325052111|dbj|BAJ82449.1| putative amidase [Acidiphilium multivorum AIU301]
Length = 453
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 165/375 (44%), Gaps = 27/375 (7%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ AV DLFD+ G T G A AA + + ++ L G IG+T +
Sbjct: 71 APSPWAGIPIAVKDLFDMAGQETRAGSKVLAGCGPAA-QDAPAIARLRRMGFVPIGRTNM 129
Query: 114 DEFAYSINGTNKHYDTPTNPA----APSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
EFAYS GTN HY TP PA ++PGGSSSG+AVAVAA + +G DT G R
Sbjct: 130 TEFAYSGIGTNPHYGTP--PARWRREERRIPGGSSSGSAVAVAAGMAHAGIGTDTGGSCR 187
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS 229
+P+ F ++GF+P+ + G++P+S+SLD+VG AR + ++ P A +
Sbjct: 188 IPAVFNDLVGFKPTARRIPREGVVPLSSSLDSVGPLARSVGCCALLDSIMAGTPEAPP-A 246
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
P ++ L +P D + + F + + G ++ +P K
Sbjct: 247 PAEL-----AGLRLAVPRDVALDTLDDEVAAGFDAALRRLSAAGARIETIAMPEFAEVAK 301
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
N + E H + A DP + + E+S + + R +
Sbjct: 302 LNARGG-----LTAAESHAWHRPLLARGAEAYDPRVLVRLRRGAELSAADYIDLLAGRAD 356
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-----SIASVSGCCQ 403
+ + + L L+ PT A PP++ L +D A +L ++ ++ C
Sbjct: 357 LVARARARLAPHDALLMPTVAILPPRIAD---LDDDAAFTAANLRVLRNPTLINMIDGCA 413
Query: 404 VTVPLGYYDKCPTSV 418
+++PL P +
Sbjct: 414 ISLPLNAPGAAPVGL 428
>gi|288960642|ref|YP_003450982.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
gi|288912950|dbj|BAI74438.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
Length = 608
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+A PL G+ FAV D D+ G T PE A+ T+T V L++ GA +GK
Sbjct: 77 RAALPLYGVPFAVKDNIDVAGLPTTAACPE---YTYTATDTATAVQRLLDAGAILVGKAN 133
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+D+FA + G Y NP P +PGGSSSG+AVAVA+ LV F+LG DT G RVP+
Sbjct: 134 LDQFATGLVGVRSPYGVARNPIDPLCVPGGSSSGSAVAVASGLVGFALGTDTAGSGRVPA 193
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
AF I+G +P+ G VS G++P SLD V FA
Sbjct: 194 AFTNIVGLKPTKGLVSTAGVVPACRSLDCVSVFA 227
>gi|260221605|emb|CBA30337.1| hypothetical protein Csp_C23040 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 623
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FA+ D D+ G T G P++A +++TVV L++ GA IGKT +D+F
Sbjct: 89 PLWGIPFAIKDNIDLAGVPTTAGCPDYAYI---PEQSATVVQRLLDAGAIAIGKTNLDQF 145
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A +NG+ Y N P + GGSS+G+AV+VA V FSLG DT G RVP+ F
Sbjct: 146 ATGLNGSRSPYGACLNSHNPGFVSGGSSAGSAVSVALGQVSFSLGTDTAGSGRVPAGFNH 205
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +PS G +S G++P +LD V FA
Sbjct: 206 LVGLKPSLGLLSTHGVVPACRTLDVVSIFA 235
>gi|78045871|ref|YP_362046.1| amidase [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|346723230|ref|YP_004849899.1| amidase [Xanthomonas axonopodis pv. citrumelo F1]
gi|78034301|emb|CAJ21946.1| glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346647977|gb|AEO40601.1| amidase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 486
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ F V DLFD+ G VT G R H ASR + VV L + GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAG--AAVRAHCPPASRDAAVVQRLSDAGAVLVGTANMDEF 165
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CG
Sbjct: 166 AYGFATVNAHYGTTANPHDLQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
I G RP++GAV G+ P +LD G FA LR + VL P
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVAGPFATSVADLRRIHEVLRGQPL 273
>gi|15920693|ref|NP_376362.1| enantiomer-selective amidase [Sulfolobus tokodaii str. 7]
gi|15621476|dbj|BAB65471.1| amidase [Sulfolobus tokodaii str. 7]
Length = 396
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 28/384 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L L F + D+ +G T G S + +V ++ G IGKT EFA
Sbjct: 29 LRDLKFGIKDIILTKGVRTTAGSK--ILKDFIPSENAYIVDKILAEGGEIIGKTNTHEFA 86
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
T+ NP P ++ GGSS G+AVAVA LVD +G DT G VR+P++ CG+
Sbjct: 87 IGATNTSSLIGPAKNPYDPERISGGSSGGSAVAVALGLVDVGIGTDTGGSVRIPASLCGV 146
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ--LPFAAQRSPRQIII 235
+GF+P+YG + G+IP S + DT+G+ A+D ++R L + +PF + R +
Sbjct: 147 IGFKPTYGIIPTDGVIPFSWTFDTIGFLAKDISLIRRTIEALAENKIPFISYSKRRPTL- 205
Query: 236 ADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN 295
F + ++ VI F +++E L ++ S++
Sbjct: 206 --GLFLFGDYETSKALEPVINKLSSYFDLVQIENELLIKH--SRI--------------- 246
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
V + I E + H ++ + K D+ I E +I T N IR + S
Sbjct: 247 VRKTIALAEASSYHMKYYDKYKDLYSSDVRKLIEEGFKILATDYVNSLRIRKVLLEEYFS 306
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSED--YQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ K L++PTT PK+ +E++ + Y++ + I + G +++P+ +
Sbjct: 307 IFKKIDALISPTTRIVAPKI--QEVIGNELKYRDSLIANTEIFNTLGAPSISIPVTKLND 364
Query: 414 CPTSVSFIARHGGDRFLLDTVQNM 437
P + D +LD + +
Sbjct: 365 LPVGLMISGEPYKDGTVLDIAEEI 388
>gi|297539390|ref|YP_003675159.1| allophanate hydrolase [Methylotenera versatilis 301]
gi|297258737|gb|ADI30582.1| allophanate hydrolase [Methylotenera versatilis 301]
Length = 457
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FA+ D D+ G T PE+A + ++TVV L++ GA IGKT +D+F
Sbjct: 64 PLYGVPFAIKDNIDLAGIPTTAACPEYAYIPTV---SATVVQKLIDAGAIPIGKTNLDQF 120
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + GT Y N P + GGSS+G+AV+VA + FSLG DT G RVP++F
Sbjct: 121 ATGLVGTRSPYGACQNSFNPDYISGGSSAGSAVSVALGMASFSLGTDTAGSGRVPASFNN 180
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +PS G +S G++P +LD V FA
Sbjct: 181 LVGHKPSCGLLSTSGVVPACRTLDCVSIFA 210
>gi|284045816|ref|YP_003396156.1| amidase [Conexibacter woesei DSM 14684]
gi|283950037|gb|ADB52781.1| Amidase [Conexibacter woesei DSM 14684]
Length = 416
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
A PL G++ AV DL + G G G A + + +V+ L GAT +G
Sbjct: 48 SATRPLAGITVAVKDLVAVAGQPLGAGSAVRADAAPEPA-DAPIVARLRACGATIVGLVT 106
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+ EFA+ + G N TP NP A +PGGSSSG+AVAVA ++G DT G VR+P+
Sbjct: 107 LHEFAFGVTGLNAWAGTPENPRAAGCIPGGSSSGSAVAVADGSARVAIGTDTGGSVRIPA 166
Query: 173 AFCGILGFRPSYGAVSH--MGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
A CG+ GF+PS G+ ++ G+ P++ SLDTVG A L V L +LP R
Sbjct: 167 ALCGVAGFKPS-GSTTYPTTGVFPLAPSLDTVGTLASTVADLAAVHAALGELPGPPVRPA 225
Query: 231 RQIIIA---DDCFELLKIPADRVVQVVIKSTEKLF------GRQVLKHENLGEYFDSKVP 281
R ++ DD + I + V+ ++++ +L G +VL+ + ++
Sbjct: 226 RVGVVRAALDDAEPAVAIAVESVLAALVRAGCELVDVSWPGGERVLEVSTTIMFAEAAAT 285
Query: 282 SLKGFHK 288
+G +
Sbjct: 286 HRRGLEE 292
>gi|384429834|ref|YP_005639195.1| glu-trnAgln amidotransferase a subunit [Xanthomonas campestris pv.
raphani 756C]
gi|341938938|gb|AEL09077.1| glu-trnAgln amidotransferase a subunit [Xanthomonas campestris pv.
raphani 756C]
Length = 486
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 165/380 (43%), Gaps = 40/380 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ F V DLFD+ G VT G A++ + A+R + VV L + GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAALRAQS-APATRDAAVVQRLSDAGAVLVGTANMDEFA 166
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N+HY T NP + GGSS G+A AVAA V F+LG DT G +RVP+A CG+
Sbjct: 167 YGFATVNEHYGTTANPHDHRHLAGGSSGGSAAAVAAGWVPFALGSDTNGSIRVPAALCGV 226
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G RP++G + G+ P +LD VG FA LR V V+ P
Sbjct: 227 YGLRPTHGTLPLEGVFPFVDALDVVGPFATSVADLRRVYEVMHGHP-------------- 272
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF--HKTNGELKN 295
+PA V + I F R NL ++ + +L T EL +
Sbjct: 273 -------VPACSVETLRIAQLGGWFQR------NLDPELEAGLGTLLTAIGSTTIMELPD 319
Query: 296 VMR------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
R ++ E + H + + DP + L++ + + + + +
Sbjct: 320 AERARAAAFVLTAAEGGHRHRNALSTQAAQFDPATRDRLLAGLQLPASAVADAQQFAHWF 379
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----VSGCCQVT 405
A+ L +L+ P T P++ + ++ + A + L I + ++ C +
Sbjct: 380 ARAMRMLWDRVDVLIAPATPGVAPRIDQESIIIDGLPVSARANLGIFTQPLGLAACPVLA 439
Query: 406 VPLGYYDKCPTSVSFIARHG 425
PL + P V IA G
Sbjct: 440 APLPRPGRLPLGVQLIAAPG 459
>gi|320159605|ref|YP_004172829.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anaerolinea
thermophila UNI-1]
gi|319993458|dbj|BAJ62229.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Anaerolinea thermophila UNI-1]
Length = 527
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ ++ D+F ++ T A + A T+T V L + GA +GK +D
Sbjct: 84 PGALAGIPVSIKDIFCVKDTPTTAASRILA--NFTAPYTATPVERLEQSGALLVGKVNLD 141
Query: 115 EFAY-SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
EF Y S N ++ TP NP PS++PGGSS G+A AVAA SLG DT G +R P++
Sbjct: 142 EFTYGSSNESSAFKPTPRNPWDPSRVPGGSSGGSATAVAAGESVLSLGTDTAGSIRQPAS 201
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
FCG++G +P+YG VS G+I ++SLD G A+D
Sbjct: 202 FCGVVGLKPTYGRVSRYGLIAFASSLDCPGPLAKD 236
>gi|268318045|ref|YP_003291764.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
DSM 4252]
gi|262335579|gb|ACY49376.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodothermus
marinus DSM 4252]
Length = 491
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L GL AV D+ I+ G S +TV++ L E GA
Sbjct: 64 EPLPP-----LGGLVLAVKDVICIKDQRVTCGSRMLENFVSLYD--ATVITRLREAGAIF 116
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
IGKT DEFA + ++ NP P +PGGSS G+AVAVAA + +LG DT G
Sbjct: 117 IGKTNCDEFAMGSSNETSYFGPARNPINPDYVPGGSSGGSAVAVAARMCQAALGSDTGGS 176
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 203
+R P+AFCGI+G +P+YG VS G++ ++S DT+G
Sbjct: 177 IRQPAAFCGIVGLKPTYGRVSRYGLVAYASSFDTIG 212
>gi|384920003|ref|ZP_10020026.1| amidase, partial [Citreicella sp. 357]
gi|384466121|gb|EIE50643.1| amidase, partial [Citreicella sp. 357]
Length = 164
Score = 112 bits (281), Expect = 4e-22, Method: Composition-based stats.
Identities = 62/150 (41%), Positives = 88/150 (58%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
PP P+ PL GL+ V D++D+ GY TG G P + T+ + L++ GA
Sbjct: 15 PPVPVENAPDGPLAGLTLGVKDIYDVAGYRTGCGCPIRLAMSDIKTATAPAIQALLDAGA 74
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
GK DE A+S+ G N H+ P NP AP ++PGGSSSG+ A A L D ++G DT
Sbjct: 75 AFNGKLHTDELAWSMYGMNAHFGMPVNPNAPGRIPGGSSSGSGAACAGGLADITVGSDTG 134
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPI 195
G VR P++FCG G RP++G +S G++P+
Sbjct: 135 GSVRAPASFCGTWGIRPTHGLISLDGVMPL 164
>gi|17228513|ref|NP_485061.1| amidase [Nostoc sp. PCC 7120]
gi|17130364|dbj|BAB72975.1| Glu-tRNA(Gln) amidotransferase subunit A [Nostoc sp. PCC 7120]
Length = 464
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 166/375 (44%), Gaps = 28/375 (7%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+P L G+ FAV +LFDI G T G A + ASR +T V+ L + GA +G
Sbjct: 62 NSPGLLAGVPFAVKNLFDIAGLTTLAGAKINAE-NPPASRDATAVAKLKQAGAVLVGALN 120
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DE+AY N HY NP ++ GGSS G+A AVAA LV FSLG DT G +RVP+
Sbjct: 121 MDEYAYGFVTENSHYGATHNPQDLQRVAGGSSGGSAAAVAAGLVTFSLGSDTNGSIRVPA 180
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQR 228
A CG+ GF+P+YG +S G+ S+S D +G FAR + + +L + P QR
Sbjct: 181 ALCGVFGFKPTYGRLSRAGVALFSSSFDHIGPFARSVGDIATIFDILQGEDDRDPICTQR 240
Query: 229 --SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+P + D + AD Q S ++V N+ Y +L
Sbjct: 241 PANPTLPQLNQDISHIRIAIADDYFQKGATSAALAAVQEVANALNVTNYV-----TLPEA 295
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
H+ + +I E N H + + + DP I + R
Sbjct: 296 HRA----RAAAFVITASEGANLHLDKLRTRPQDFDPATRDRFLAGALIPSNWYIQAQRFR 351
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLG-------GKEMLSEDY-----QNRAFSLLS 394
R I + ++ +++ PTT P +G G+E+L + Q +F L
Sbjct: 352 QWYRDRIREVFQNVDVILAPTTPITAPLIGQQTMILDGEEILVRPHLGLFTQPLSFIGLP 411
Query: 395 IASVSGCCQVTVPLG 409
+ SV C +PLG
Sbjct: 412 VLSVPIQCPNALPLG 426
>gi|194289556|ref|YP_002005463.1| amidase [Cupriavidus taiwanensis LMG 19424]
gi|193223391|emb|CAQ69396.1| putative AMIDOTRANSFERASE/AMIDASE [Cupriavidus taiwanensis LMG
19424]
Length = 458
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 176/395 (44%), Gaps = 52/395 (13%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
KA HPL GL +V DL+D+ G +T + A+ + VV+ L GA IG+T
Sbjct: 65 KALHPLAGLPVSVKDLYDVAGEITRAAS-VVRADAAPAAADAPVVARLRAAGAALIGRTN 123
Query: 113 VDEFAYSINGTNKHYDTPTNPAA---PSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
+ EFA+S G N HY TP NPA P ++PGGSSSGAAV+VA L +LG DT G +R
Sbjct: 124 MTEFAFSGVGINPHYGTPANPAGGEGPGRIPGGSSSGAAVSVALGLAVAALGSDTGGSIR 183
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ---LP--- 223
+P+A CGI GF+P+ V G P+S +LDT AR V V+ LP
Sbjct: 184 IPAALCGITGFKPTARRVPLAGAFPLSYTLDTACAMARTVSDCIAVDSVIADSAVLPRVT 243
Query: 224 -FAAQR--SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-----LKHENLGEY 275
AA R PRQ+++ D + VV ++ ++ GR L+H +L E
Sbjct: 244 DAAATRLAIPRQLLL------------DDLDPVVARAFDRALGRLSAAGVRLEHVDLPEL 291
Query: 276 FDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEIS 335
+ L + G I R+ + + DP +++ I IS
Sbjct: 292 GE-----LAALNAHGGFSAAEAYAIHRHTLAARRDRY--------DPRVASRIDRGAGIS 338
Query: 336 ETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI 395
+ R + + + + L +V PT P++ + ++D + L +
Sbjct: 339 AADYIDLGRARLDWIARMEARLDGFDAVVCPTVPMVAPEI--APLRTDDAHFFRVNALLL 396
Query: 396 ASVSG-----CCQVTVPLGYYDKCPTSVSFIARHG 425
+ S C V++P D+ P V + HG
Sbjct: 397 RNTSAFNFFDGCSVSMPCHAPDELP--VGLMLSHG 429
>gi|172038459|ref|YP_001804960.1| amidase [Cyanothece sp. ATCC 51142]
gi|354554194|ref|ZP_08973499.1| amidohydrolase, AtzE family [Cyanothece sp. ATCC 51472]
gi|171699913|gb|ACB52894.1| amidase [Cyanothece sp. ATCC 51142]
gi|353553873|gb|EHC23264.1| amidohydrolase, AtzE family [Cyanothece sp. ATCC 51472]
Length = 456
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDIEG +T G + + ++ A+ +T + L GA +G +DE+A
Sbjct: 71 LAGVPFAVKNLFDIEGIITLAGS-KINQKNTPAAENATAIKKLNAAGAILVGALNMDEYA 129
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP S++ GGSS G+A AVAA+LV F+LG DT G VRVP+A CG+
Sbjct: 130 YGFVTENSHYGATPNPHDLSRISGGSSGGSAAAVAANLVPFTLGSDTNGSVRVPAALCGV 189
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
LG +P+YG +S G + S SLD +G F R + + + VL
Sbjct: 190 LGLKPTYGRLSRAGTVLFSNSLDHIGGFTRSVRDMAAIFDVL 231
>gi|399018160|ref|ZP_10720345.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398101946|gb|EJL92143.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 390
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+G + A+ D DI+G T G + A+ + VV L++ G K + E AY
Sbjct: 25 SGPTVAIKDCIDIQGMQT-RGGSAALADAAPAAVHADVVRRLLDAGWQITAKANMHELAY 83
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N TP NP P++MPGGSSSG A AV A LVD ++G DT G +R+P+A CG++
Sbjct: 84 GMTGINDWSGTPLNPQDPARMPGGSSSGCAAAVGAGLVDVAIGSDTGGSIRLPAACCGVI 143
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
GF+PS+G VS G P ++LD VG FAR
Sbjct: 144 GFKPSFGRVSRSGAYPQHSTLDCVGPFAR 172
>gi|440752298|ref|ZP_20931501.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
TAIHU98]
gi|440176791|gb|ELP56064.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
TAIHU98]
Length = 443
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDI+G VT G + R H AA + + + TL GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 127 YGFVTENAHYRATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+G +P++G VS G+ +SLD +G+F+
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFS 215
>gi|398848408|ref|ZP_10605225.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM84]
gi|398248513|gb|EJN33924.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM84]
Length = 371
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 176/393 (44%), Gaps = 45/393 (11%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G V D D+ G T + A R + VVS L+ GA GK + E A+
Sbjct: 14 GPRVVVKDTIDVAGTAT-RASSQALEQAPLAERHAEVVSQLLANGARLTGKVSLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
G N + T NP P ++PGGSSSG+A AVAA L DFSLG DT G VR+P+ CG+ G
Sbjct: 73 TTGINHYTGTAANPRFPGRIPGGSSSGSAAAVAAGLADFSLGTDTGGSVRIPACCCGVFG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARD-PKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
+P++G VS G++P +SLD VG FA P ++R + ++ F + P + I
Sbjct: 133 LKPTFGRVSRKGVMPARSSLDCVGPFAASLPMLVRAMS--MIDPTFVPAQVPAKARIG-- 188
Query: 239 CFELLKIPAD----RVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+L++ A+ +VV + ++ G LKH G +D+
Sbjct: 189 ---VLRVTAEAAIHKVVHGALTASGLPLGNVELKH--FGAAYDAG--------------- 228
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
M +I R F+ +E+ K + DI+ + + +++ + + +R +
Sbjct: 229 --MVVINRETFEGC-GHLLETGK--VGTDIAGRLAAAGKTTDSALAEAEEVRRRFTEEVD 283
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
L +L PT P + L E RA SL+ ++SG +++PLG
Sbjct: 284 QALASFDVLALPTMPDFPLR------LEEAADTRAVLGMTSLVRPFNLSGHPALSIPLGS 337
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
P + +A G D LL + + +L +
Sbjct: 338 AAGLPVGLQLVAAKGADEKLLAVAERLLLNLYQ 370
>gi|91978265|ref|YP_570924.1| allophanate hydrolase [Rhodopseudomonas palustris BisB5]
gi|91684721|gb|ABE41023.1| Amidase [Rhodopseudomonas palustris BisB5]
Length = 599
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D+ G T P +A S + ST V+ L GA IGKT +D+F
Sbjct: 63 PLYGVPVAVKDNIDVAGLPTTAACPAFAYRPS---KDSTAVARLRAAGAIVIGKTNLDQF 119
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P +PGGSSSG+AVAVAA LV SLG DT G RVP+
Sbjct: 120 ATGLVGVRSPYGIPRNAMRPDLVPGGSSSGSAVAVAAGLVPLSLGTDTAGSGRVPAMLNN 179
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G +S G++P +LD + FA
Sbjct: 180 IVGLKPSLGLISTTGLVPACRTLDCISVFA 209
>gi|425457005|ref|ZP_18836711.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9807]
gi|389801772|emb|CCI19114.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9807]
Length = 443
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 6/188 (3%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDI+G VT G + R H AA + + + TL GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 127 YGFVTENAHYGATPNPCDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQRSPRQI 233
+G +P++G VS G+ +SLD +G+F+ + + + + L+ P + + I
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWSLFAKNNLKAPLSGLEGVK-I 245
Query: 234 IIADDCFE 241
+ADD F+
Sbjct: 246 ALADDYFQ 253
>gi|381173060|ref|ZP_09882170.1| amidohydrolase, AtzE family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686492|emb|CCG38657.1| amidohydrolase, AtzE family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 486
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ F V DLFD+ G VT G A ASR + VV L E GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAAVRAYC-PPASRDAAVVQRLGEAGAVLVGTANMDEFA 166
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY T NP + GGSS G+A AVAA LV F+LG DT G +RVP+A CGI
Sbjct: 167 YGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGI 226
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G RP++GAV G+ P +LD VG FA LR V VL P
Sbjct: 227 YGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCVYDVLRGQPL 273
>gi|443646845|ref|ZP_21129523.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
DIANCHI905]
gi|159028871|emb|CAO90676.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335674|gb|ELS50138.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
DIANCHI905]
Length = 439
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDI+G VT G + R H AA + + + TL GA +G T +DE+A
Sbjct: 64 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAARQDAIAIQTLEAAGAVLVGATNMDEYA 122
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 123 YGFVTENAHYRATPNPRDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 182
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+G +P++G VS G+ +SLD G+F+
Sbjct: 183 VGLKPTFGRVSRQGLFLFVSSLDHPGFFS 211
>gi|357417637|ref|YP_004930657.1| amidase [Pseudoxanthomonas spadix BD-a59]
gi|355335215|gb|AER56616.1| amidase [Pseudoxanthomonas spadix BD-a59]
Length = 477
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ FAV DLFD++G T G R +A A+R + VV L GA +G T +DEF
Sbjct: 97 LAGVPFAVKDLFDVQGLPTTAG--AAMRVDAAPAARDAEVVRRLKAAGAVLVGTTNMDEF 154
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N H+ T NP P+++ GGSS G+A AVAA LV F+LG DT G +RVP+A CG
Sbjct: 155 AYGFATVNAHFGTTRNPHDPARLAGGSSGGSAAAVAAGLVQFALGSDTNGSIRVPAALCG 214
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
I G R ++G V G+ P +LD G FAR +L+ V V+
Sbjct: 215 IYGLRSTHGQVPLQGVFPFVQALDVAGPFARSLDLLQTVHEVM 257
>gi|193077472|gb|ABO12292.2| Glu-tRNA amidotransferase [Acinetobacter baumannii ATCC 17978]
Length = 369
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 178/390 (45%), Gaps = 50/390 (12%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI+G T G A + ++ +++ I KT + E A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPAQDD-AEIIKNILKADCEIIAKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P++G VS G+ P S+SLD VG FA +++ ++ P + A +
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----DPTFKPTEFTSAPN-L 187
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLI 300
+L + AD ++ I Q + NL + KV + + ++ N
Sbjct: 188 AVLDVSADEIIWNCI--------YQAFQKANL-QTTSEKVEHFEAAYDAGMQIIN----- 233
Query: 301 QRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAISSL 356
YE N + E + L I +++ G +L+ + T +E K +R ++ + +L
Sbjct: 234 --YE---NWQAFGELTQTGL---IGSDVNGRLLKAAHTTLEQVKQAEVVRAQLTQELDAL 285
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGYYD 412
L+ LV PT PPK +SE AF L+ ++SG ++VPL +
Sbjct: 286 LEKYDALVLPTLPQIPPK------VSEAENTVAFLNLTGLVRPFNLSGHPAISVPLETSE 339
Query: 413 KCPTSVSFIARHGGD-------RFLLDTVQ 435
P + +++H D +F +D +Q
Sbjct: 340 GLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|422303654|ref|ZP_16391005.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9806]
gi|389791410|emb|CCI12836.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9806]
Length = 438
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 95/150 (63%), Gaps = 1/150 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDI+G VT G + R H AA + + + TL GA +G T +DE+
Sbjct: 67 PLAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAVGAVLVGATNMDEY 125
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG
Sbjct: 126 AYGFVTENAHYGATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCG 185
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +P++G VS G+ +SLD G+F+
Sbjct: 186 VVGLKPTFGRVSRQGLFLFVSSLDHPGFFS 215
>gi|39934847|ref|NP_947123.1| amidase [Rhodopseudomonas palustris CGA009]
gi|39648697|emb|CAE27219.1| putative Glu-tRNA amidotransferase [Rhodopseudomonas palustris
CGA009]
Length = 452
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 176/406 (43%), Gaps = 41/406 (10%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP P G+ ++ DLFDI+G VT G + A + V+ L G IG++ +
Sbjct: 70 APSPFAGIPISIKDLFDIKGQVTRAGS-RALDDNPPADSDAPAVARLRRAGFVVIGRSNM 128
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQ----MPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
EFAYS G N HY TP AA + +PGGSSSGAAV+VA + LG DT G R
Sbjct: 129 TEFAYSGIGINPHYGTPK--AAYRRNVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCR 186
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA--Q 227
+P+AF GI+G++PS V G +P+S SLD++G AR + + +L P
Sbjct: 187 IPAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLARSVECCATLDAILADQPVGPLIA 246
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGF 286
R + + IA +P + + + F R + + G + +VP
Sbjct: 247 RPLKGMRIA--------VPTTVALDDLDAAVTAAFERALKTLASHGVIIEKIEVPEFAEV 298
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKS 344
K + Y + H I + DP + I GE ++ V + +
Sbjct: 299 GPLGA--KGGFAAAESYAW---HRYLIVAQGDVYDPRVRERILRGETQSAADYV--DLVN 351
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC--- 401
R + + S+ L + PTTA P ++E ++AF+ ++ ++ C
Sbjct: 352 ARKSLIARASARLAPYDAVAMPTTAIAAPT------IAELADDKAFTKANLLTLRNCTLI 405
Query: 402 -----CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +++P + P + +G DR + + M A ++
Sbjct: 406 NMIDGCAISLPCHQDGEPPIGLMLAGVNGTDREIFEVAAGMEAVIR 451
>gi|422628880|ref|ZP_16694087.1| hypothetical protein PSYPI_03582 [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330937625|gb|EGH41544.1| hypothetical protein PSYPI_03582 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 287
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 93/170 (54%), Gaps = 24/170 (14%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTV--------VST 99
QPL P G+ A DLFD+ G VT T AA RTS V
Sbjct: 25 QPL-----SPFDGVPIAWKDLFDVAGSVT---------TAGAAVRTSLSPALLDAPSVGL 70
Query: 100 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVD 157
L G +GKT + EFAYS G N H+ TP NP++ S ++PGGSSSG+AVAVA V
Sbjct: 71 LARSGMVSLGKTNLSEFAYSGLGLNPHFGTPINPSSDSSPRVPGGSSSGSAVAVANGTVP 130
Query: 158 FSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
++G DT G +RVP+A G++GFR + S G+ P++ +LD+VG R
Sbjct: 131 IAMGTDTAGSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTR 180
>gi|378827806|ref|YP_005190538.1| putative amidase [Sinorhizobium fredii HH103]
gi|365180858|emb|CCE97713.1| putative amidase [Sinorhizobium fredii HH103]
Length = 435
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 171/390 (43%), Gaps = 16/390 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G T G RT AS +TVV L GA IGKT + EF
Sbjct: 56 PLDGLIVSIKDLFDVAGEPTLAGS-ILRRTAPPASADATVVRRLRAAGAVIIGKTHMTEF 114
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY P N P +PGGSSSGA V+VA + ++G DT G VR+P+A G
Sbjct: 115 AFTAVGLNPHYPVPGNAVDPMLVPGGSSSGAGVSVAEGTSEIAIGSDTGGSVRIPAALHG 174
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ V G P+S SLD++G A V A +P +
Sbjct: 175 LVGFKPTARRVPLDGAFPLSPSLDSIGPLA------LSVADCAAADAIMAGETPEPLTPL 228
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGELKN 295
L IP +++ + K F + + G + ++ L + +
Sbjct: 229 PVGGLTLGIPKGILLKELAPDIAKAFEASLQRLSRAGASLAEFEIDDLLARFAEATAIGS 288
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISS 355
+ L E H +W+ +DP + + + L + + +E R + A+
Sbjct: 289 LASL----EASRIHADWLVDDTAPVDPRVKSPLRRRLAVPDAALETLLQTRRALARAMDE 344
Query: 356 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVPLGYYD 412
L +++ PTT P ++ E + Y+ LL +A+ +T+P+
Sbjct: 345 RLARFDLVLLPTTPIPAVRIASVEQDKQQYRRVEDLLLRNTEVANQFDLTAITLPMPGT- 403
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
P + + R+G DR LL ++ LQ
Sbjct: 404 ALPAGLMLMGRNGADRALLRVAASVECLLQ 433
>gi|399039338|ref|ZP_10734942.1| allophanate hydrolase [Rhizobium sp. CF122]
gi|398062626|gb|EJL54396.1| allophanate hydrolase [Rhizobium sp. CF122]
Length = 609
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D+ G T P+++ + +TVV L E GA IGKT +D+F
Sbjct: 67 PLWGIPLAVKDNIDVAGMPTTAACPDYSYLPTV---DATVVRLLKEAGALVIGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N + +PGGSSSG+AVA A +V F+LG DT G RVP+
Sbjct: 124 ATGLVGVRSPYPIPRNAIDANLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRVPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS GA+S MG+IP +LD V FA
Sbjct: 184 IVGLKPSVGALSTMGVIPACRTLDCVSIFA 213
>gi|315427137|dbj|BAJ48752.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Candidatus Caldiarchaeum subterraneum]
gi|315427156|dbj|BAJ48770.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Candidatus Caldiarchaeum subterraneum]
gi|343485771|dbj|BAJ51425.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Candidatus Caldiarchaeum subterraneum]
Length = 443
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+SF V D+F I+GY T G ++ +SRT+ VVS ++E G GKT + EFA
Sbjct: 63 LRGISFGVKDVFHIKGYPTTAG--SRLLSNMVSSRTAAVVSRILEAGGAVNGKTNLHEFA 120
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ ++ N Y NP S++ GGSS G+AVAVA + D LG DT G VRVP+AFCG+
Sbjct: 121 FGVSNINPFYGACLNPFDTSRVSGGSSGGSAVAVALGMCDIGLGTDTAGSVRVPAAFCGV 180
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+GF+P+ G +S G+IP+S S+D VG +R+
Sbjct: 181 VGFKPTSGQLSTDGVIPLSWSMDHVGILSRN 211
>gi|402550903|ref|YP_006599623.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma
genitalium M2321]
gi|402551895|ref|YP_006600613.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma
genitalium M6320]
gi|401799598|gb|AFQ02915.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma
genitalium M2321]
gi|401800590|gb|AFQ03905.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma
genitalium M6320]
Length = 477
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
++TV L GA +GK +DEF G+ + +P S + GGSSSG+A AVA
Sbjct: 93 SATVFELLEMNGALLVGKANMDEFGLGGTGSYSAFGVVHHPENSSLIAGGSSSGSAYAVA 152
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
D+V FS+ DT +R P++ C ++GF+P+YG +S G+ P + S+D VG FA+ +
Sbjct: 153 KDIVPFSIATDTGDSIRRPASICNVVGFKPTYGLISRNGVFPYAPSMDHVGIFAKFVSDI 212
Query: 213 RHVGHVLL---QLPFAAQRSPRQIIIADDCFELLKIPADRVVQV-VIKSTEKLFGRQVLK 268
V V++ + F++Q+SP + + F L IP R ++ +KS E+LF + + K
Sbjct: 213 AIVSDVVIKHDKTDFSSQKSPDE----NQFFNELAIPFTRSIRFGYLKSLERLFNKHLQK 268
Query: 269 HEN 271
N
Sbjct: 269 KWN 271
>gi|425434498|ref|ZP_18814967.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9432]
gi|389676042|emb|CCH94914.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9432]
Length = 443
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDI+G VT G + R H AA + + + TL GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 127 YGFVTENAHYRATPNPRDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+G +P++G VS G+ +SLD G+F+
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHPGFFS 215
>gi|21227329|ref|NP_633251.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina
mazei Go1]
gi|23821593|sp|Q8PXJ1.1|GATA_METMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|20905684|gb|AAM30923.1| Glutamyl-tRNA(Gln) amidotransferase, subunit A [Methanosarcina
mazei Go1]
Length = 476
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 182/431 (42%), Gaps = 58/431 (13%)
Query: 57 PLTGLSFAVSDLFDI------------EGYVTGFGHPEWARTHSAASRTSTVVSTLVEGG 104
PL G+ A+ D + EGYV F + V+ L+ G
Sbjct: 61 PLAGVPIAIKDNISVVGLPNSCGSKILEGYVPPF--------------NAHVIEKLLSAG 106
Query: 105 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDT 164
A +GKT +DEFA + H+ NP ++PGGSS G+A VAA F+LG DT
Sbjct: 107 AVILGKTNMDEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDT 166
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRHV--GHVL 219
G VR P++FCG++G +P+YGAVS G++ + SL+ VG A D +L V G+
Sbjct: 167 GGSVRCPASFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAVLMDVIAGYDR 226
Query: 220 LQLPFAAQRSPRQIIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS 278
++ Q + DD L + +P + + + EK + K E+LG ++
Sbjct: 227 RDSTSIDSKTEYQKALVDDVKGLKIGVPKEFFGEGIHPDVEKAVWDAIHKCESLGATWEE 286
Query: 279 -KVPSLK----GFH--KTNGELKNVMRLI-QRYEFKNNHNEWIESVKPALDPDISAEIGE 330
+P +K ++ + N+ R RY F+ W V E+
Sbjct: 287 VSMPHIKYALASYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKR 346
Query: 331 MLEISETVIENCKSIRNEMRS-AISSLLKDD--------GILVTPTTAYPPPKLGGKEML 381
+ + + + +++ + +L+K D +L+ PT P K+G K
Sbjct: 347 RILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKVDLLMAPTMPNPAFKIGEK--- 403
Query: 382 SEDYQNRAFSLLSIASV--SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
ED S ++ + +G ++VP G+ D P + + G F +TV
Sbjct: 404 IEDPLTLYLSDINTCPINLAGVPSISVPCGFTDGLPIGLQIM----GKPFDEETVLRAAY 459
Query: 440 SLQEQADIATK 450
+ ++ D TK
Sbjct: 460 TFEKNTDYHTK 470
>gi|440224646|ref|YP_007338042.1| allophanate hydrolase [Rhizobium tropici CIAT 899]
gi|440043518|gb|AGB75496.1| allophanate hydrolase [Rhizobium tropici CIAT 899]
Length = 600
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ FAV D D+ G T P++A +TVV L E GA IGKT +
Sbjct: 64 ATKPLWGIPFAVKDNIDVAGMPTTAACPDYAYMPDT---DATVVRLLKEAGALVIGKTNL 120
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
D+FA + G Y P N +PGGSSSG+AVA A +V F+LG DT G R+P+
Sbjct: 121 DQFATGLVGVRTPYPVPRNAMDADLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRIPAG 180
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS GA+S G+IP +LD V FA
Sbjct: 181 LNNIVGMKPSLGALSTSGVIPACRTLDCVSIFA 213
>gi|254444029|ref|ZP_05057505.1| Amidase, putative [Verrucomicrobiae bacterium DG1235]
gi|198258337|gb|EDY82645.1| Amidase, putative [Verrucomicrobiae bacterium DG1235]
Length = 431
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 154/351 (43%), Gaps = 20/351 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+G+ F + DLFD GY T +R + + GA GKT ++EFA
Sbjct: 65 LSGVPFLLKDLFDFPGYPTTASSLFLTDVRPKPTREAALSKAFRAQGAVFAGKTHLNEFA 124
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y ++G N + +P P ++ GGSSSG+A AV + +V + G DT G +RVP+A+CGI
Sbjct: 125 YGLSGENPTFGNCPHPIYPERLSGGSSSGSAWAVRSGIVPIATGTDTGGSIRVPTAWCGI 184
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G R S S G P++ S DT GWF + +R LL P + SP + +
Sbjct: 185 YGLRLSPNEWSSKGCFPLAPSFDTAGWFCSTAEDMRLCIETLLS-PKRGKTSPLRGV--- 240
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
LL+ D ++ KS + L E L D V + + T +
Sbjct: 241 ---SLLESVKDLSIEFRAKSGDVL--------EILNAQSDPSV--TEAYRVTTRSITQSY 287
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
++Q E H WI++ K DP + I + I++ K + +
Sbjct: 288 SILQSLEALQVHKAWIDAHKKRYDPVVWQRIDRARHWTPAQIDDAKKTEARIIDFFQACF 347
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+ +V P T P + E +++++ ++ + S + C +T+P+
Sbjct: 348 ERYDFIVLPATQS--PAISAAEH-TDEFRTNLLAITAPGSFARCPVLTIPI 395
>gi|337266223|ref|YP_004610278.1| Amidase [Mesorhizobium opportunistum WSM2075]
gi|336026533|gb|AEH86184.1| Amidase [Mesorhizobium opportunistum WSM2075]
Length = 431
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 172/391 (43%), Gaps = 39/391 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G +V DLFD+ G T G +T ASR + VS L + GA IGKT + EF
Sbjct: 52 PLDGTIVSVKDLFDVAGEPTTAGS-LMRKTAMPASRDAATVSRLRQAGAVIIGKTNMTEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY TP N S++PGGSSSGA V+V + S+G DT G VR+P++ G
Sbjct: 111 AFTAIGDNMHYGTPGNAVDASRIPGGSSSGAGVSVGEATSEISIGSDTGGSVRIPASLNG 170
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR--------DPKILRHVGHVLLQLPFAAQR 228
++GF+P+ V G P+S +LD++G AR D + ++ L +P + R
Sbjct: 171 VVGFKPTARRVPLTGAFPLSATLDSIGPLARTVVQCAAADAVMAGNMPAELAPIPLSGLR 230
Query: 229 --SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
PR ++ D E V + E G+ E D+++ +
Sbjct: 231 IGIPRGVLFGDTESE------------VAAAFEHCLGKI--------EQADARLADMS-I 269
Query: 287 HKTNGELKNVMRL--IQRYEFKNNHNEWIES-VKPALDPDISAEIGEMLEISETVIENCK 343
GE++ + I E H +W+ + +DP +S + I V
Sbjct: 270 DDLLGEMRAATKRGSIAAMEGAEIHADWLATGASVPVDPHVSGPLSRAAAIPTPVYIRAL 329
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPP---KLGGKEMLSEDYQNRAFSLLSIASVSG 400
R + +A+ L +L PTT P + L + + +A+
Sbjct: 330 RRRAALVAAMDERLTSFDVLALPTTPVTAPSIVSMAENAELRDHIEGLLLRNTQVANQFD 389
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
C +++P+ P + +AR+G DR LL
Sbjct: 390 LCAISLPMPGM-TLPAGLMLVARNGHDRRLL 419
>gi|171185088|ref|YP_001794007.1| amidase [Pyrobaculum neutrophilum V24Sta]
gi|170934300|gb|ACB39561.1| Amidase [Pyrobaculum neutrophilum V24Sta]
Length = 403
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 164/350 (46%), Gaps = 23/350 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G++ AV D ++ G T G P + + RT+ VV TL+ GA +GKT + E A
Sbjct: 43 LCGVALAVKDNIEVAGMPTTNGAPYMKKM---SDRTAPVVKTLLSEGAVVVGKTNMHELA 99
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
N H+ NP P ++ GGSS G+A AVA D +G DT G VR+P+A CG+
Sbjct: 100 LGATNVNPHFGPAKNPHDPGRITGGSSGGSAGAVAVGAADLGIGTDTGGSVRIPAALCGV 159
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
+G++P YG + G++P++ SLD VG+ AR K L V + P QR P++ A
Sbjct: 160 VGYKPPYGKIPTEGVLPLAQSLDHVGFLARTVKELVDVLSAVGWAPRGLQR-PKRFRFA- 217
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
LL I + EK F R V E++G D + +
Sbjct: 218 ---VLLGISEP------TRYVEKAFWRAVAALESIGGERDEEFLNAA-------RYSAAR 261
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
+ E N+ ++ S+ + D++ + + + ++ E + +SL
Sbjct: 262 AALLLSEAAANYYGYLRSMGSQMGRDVATLLSAGAALPAVAYIVARRVKEEATAYFNSLF 321
Query: 358 KDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVP 407
K ++VTPTTA P++ +E+ + + + + + +++G ++VP
Sbjct: 322 KKYDVVVTPTTATEAPRI--EEVENVAVRPKLLAYTELFNLTGHPAISVP 369
>gi|429215382|ref|ZP_19206544.1| amidase [Pseudomonas sp. M1]
gi|428154609|gb|EKX01160.1| amidase [Pseudomonas sp. M1]
Length = 385
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 164/378 (43%), Gaps = 43/378 (11%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
G AV D DI G+ T G A + + + VV +++ G +GKT + E A+
Sbjct: 17 AGKRVAVKDTIDIAGHPTRCGSRALADS-APVQHHAEVVQRVLDAGWRIVGKTNLHELAF 75
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N TP NP AP ++PGGSSSG+A AV A L D +LG DT G VRVP+A CG+
Sbjct: 76 GVTGINDWSGTPLNPQAPERVPGGSSSGSAAAVGAGLADIALGTDTGGSVRVPAACCGVA 135
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADD 238
G +PS+G VSH+G+ P +SLD VG FA + L VL F A P A+
Sbjct: 136 GLKPSFGRVSHVGVHPEHSSLDCVGPFAANMADLVAAMQVLCP-GFGAVNLPG----ANA 190
Query: 239 CFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
L++PAD +Q LG D G+ + + L
Sbjct: 191 RVAFLEVPADPHIQAC-----------------LGAAADR-----AGWRRASLYLGEFEA 228
Query: 299 LIQRYEFKNNHNEWIE----SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
+ NH W + K L D+ + S + + +R AI
Sbjct: 229 AFEAGLVVINHENWAALGQFTGKGLLGADVEQRLLAAGRTSAAQLAEAEGVRASFTRAID 288
Query: 355 SLLKDDGILVTPTTAYPPPKL----GGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
S L D IL+ PT A PP L GK + + R F+L SG ++VP+
Sbjct: 289 SALDDYEILLLPTLASLPPLLSDARSGKSVAALTSLVRPFNL------SGHPALSVPVEL 342
Query: 411 -YDKCPTSVSFIARHGGD 427
+ + + R G D
Sbjct: 343 EHGGLKVGLQIVGRKGDD 360
>gi|302896030|ref|XP_003046895.1| hypothetical protein NECHADRAFT_46003 [Nectria haematococca mpVI
77-13-4]
gi|256727823|gb|EEU41182.1| hypothetical protein NECHADRAFT_46003 [Nectria haematococca mpVI
77-13-4]
Length = 664
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +V DL+D++G T G+ + T+ V L++ GA IGK + EF
Sbjct: 182 PLAGVRISVKDLYDLKGLKTSGGNRALYEISDVKNETAFAVQRLIDAGAVVIGKNKMSEF 241
Query: 117 AYSINGTNKHYD--TPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVPS 172
A++ +H D P NP P SS G+A A+A+ D +D ++G DT G +R P+
Sbjct: 242 AFAGMYVTEHIDYLLPFNPRGDGYNSPSDSSGGSAAAIASYDWLDATMGSDTGGSIRGPA 301
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A G+ G RP+YGAV G +P+ST++DT G ARDP + + VL ++ P+
Sbjct: 302 AVNGVHGNRPTYGAVDLTGALPLSTAMDTSGILARDPLLWSKINRVLYSETKGYRKYPKT 361
Query: 233 IIIADDCFELLKIPADRVVQV 253
I + + + D V+V
Sbjct: 362 IYLDPESKATISNLQDYFVEV 382
>gi|380485130|emb|CCF39556.1| glutamyl-tRNA(Gln) amidotransferase [Colletotrichum higginsianum]
Length = 642
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 5/184 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ V D++DI G TG G+ W + AS+T+ V L++ GA +GK +F
Sbjct: 212 PLAGVRLGVKDIYDISGIKTGNGNRAWYNLYPPASQTAPAVQALIDAGAVVVGKVKTAQF 271
Query: 117 AYS--INGTNKHYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVPS 172
A N Y +P NP Q P SS+GA +VA+ + +D +LG DT G +R P+
Sbjct: 272 ANGEFANADWIDYHSPFNPRGDGYQDPNFSSAGAGASVASYEWLDIALGSDTGGSIRGPA 331
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL-PFAAQRSPR 231
G+ G RPS+GAVS +P++ DT G ARDP +LR+ VL + +++ PR
Sbjct: 332 RVQGLYGLRPSHGAVSLNHTLPLAPEFDTAGLVARDPALLRNASAVLYGVSAYSSSDFPR 391
Query: 232 QIII 235
+++
Sbjct: 392 TLLV 395
>gi|158335190|ref|YP_001516362.1| amidase [Acaryochloris marina MBIC11017]
gi|158305431|gb|ABW27048.1| amidase [Acaryochloris marina MBIC11017]
Length = 457
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDI G VT G + ++ A++ +T V+ L GA +G +DE+
Sbjct: 66 PLAGVPFAVKNLFDIAGTVTLAGS-KINQSQPPATQDATAVARLKAAGAILVGALNMDEY 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP P++M GGSS G+A AVA LV +LG DT G +RVP++ CG
Sbjct: 125 AYGFVTINHHYGVTPNPHDPTRMSGGSSGGSAAAVAVGLVPLTLGSDTNGSIRVPASLCG 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+ GF+P+YG +S G+ S+SLD +G FAR
Sbjct: 185 VYGFKPTYGRLSRAGVYLFSSSLDHIGPFAR 215
>gi|149238247|ref|XP_001525000.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451597|gb|EDK45853.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 497
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 79/147 (53%), Gaps = 21/147 (14%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV-- 151
+TVV L GATCIGK +DEF N +Y NP P +PGGS G+A AV
Sbjct: 84 ATVVELLSREGATCIGKANLDEFGMGSANRNSYYGDVVNPFRPGTVPGGSLGGSAAAVCI 143
Query: 152 -------------------AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGI 192
L DF+LG DT G VR+P+A+C ++GF+P+YG +S G+
Sbjct: 144 PNAKEKSNSEKEVRGGGEVGEALSDFALGTDTGGSVRLPAAYCNVIGFKPTYGRISRWGV 203
Query: 193 IPISTSLDTVGWFARDPKILRHVGHVL 219
IP + +LDTVG AR I++ V V+
Sbjct: 204 IPYAQTLDTVGILARKVDIVQRVYDVV 230
>gi|374365839|ref|ZP_09623925.1| copper-translocating P-type ATPase [Cupriavidus basilensis OR16]
gi|373102493|gb|EHP43528.1| copper-translocating P-type ATPase [Cupriavidus basilensis OR16]
Length = 954
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH---PEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL+GL +V DLFD++G VT G PE AA+ + V +G+T +
Sbjct: 59 PLSGLPISVKDLFDVQGDVTRAGARVLPEQVAAADAAAIARLRAAGAV-----FVGRTNM 113
Query: 114 DEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP NP A ++PGGSSSGAAV+V + ++G DT G R+P
Sbjct: 114 TEFAYSGVGINPHYGTPRNPFERAVGRIPGGSSSGAAVSVTDGMAVAAIGSDTGGSCRIP 173
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+A CGI+GF+P+ V G +P+S S D++G AR
Sbjct: 174 AALCGIVGFKPTARRVPLQGTVPLSPSYDSIGCLAR 209
>gi|433773088|ref|YP_007303555.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
gi|433665103|gb|AGB44179.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
Length = 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 177/391 (45%), Gaps = 39/391 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DLFD+ G T G +T + A R + +VS L + GA IGKT + EF
Sbjct: 52 PLDGTIVSIKDLFDVAGEPTTAGS-LMRKTAAPAQRDAAIVSRLRQAGAVVIGKTNMTEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY TP N S++PGGSSSGA V+V D S+G DT G +R+P+A G
Sbjct: 111 AFTAIGDNMHYGTPGNAVDASRIPGGSSSGAGVSVGEGTSDISIGSDTGGSIRIPAALNG 170
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++GF+P+ V G P+S +LD+VG AR I V+ A +P++++
Sbjct: 171 VVGFKPTARRVPLSGTFPLSGTLDSVGPLARTVSICAAADAVM------AGEAPKELVAI 224
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN------ 290
+ IP V+ TE G EY K+ G H T+
Sbjct: 225 PLAGLRIGIPR----GVLFGDTEGEVGSAF-------EYCLGKIEQ-AGAHITDLSIDDM 272
Query: 291 -GELKNVMRL--IQRYEFKNNHNEWIES-VKPALDPDISAEIGEMLEISETVIENCKSIR 346
+L+ R I E H +W+ + +DP +S + + V R
Sbjct: 273 IADLRAATRRGSIAAMEGAEVHADWLATGASVPVDPHVSGPLSRAALLPTPVYIRALRRR 332
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED--YQNRAFSLL----SIASVSG 400
+ +A+ L +L P T P + ++ED ++R LL +A+
Sbjct: 333 AALAAAMDERLASVDVLALPATPVTAPAIAS---MAEDAELRDRTEGLLLRNTQVANQFD 389
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
C +++P+ P + +AR+G DR LL
Sbjct: 390 LCAISLPM-PGPSLPMGLMLVARNGHDRHLL 419
>gi|384135008|ref|YP_005517722.1| amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339289093|gb|AEJ43203.1| Amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 454
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 171/411 (41%), Gaps = 39/411 (9%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P+ PL G+ +V DL D T +GH + R H RT+ V+ L A IGK
Sbjct: 67 PEGLGPLAGIPISVKDLIDTSFLPTTYGHGRF-REH-VPERTAVCVARLQRAHALIIGKA 124
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+ EFA+ + N H+ NP S++ GGSS G+A +VA L S+G DT G VR+P
Sbjct: 125 HLHEFAFGVTNENPHFGPARNPRDLSRITGGSSGGSAASVAGGLAQASVGTDTGGSVRIP 184
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A G +GF+PSYG + G++P++ +LD VG A + V V+ L + SP
Sbjct: 185 AALTGCVGFKPSYGLIPTDGVLPLAPTLDHVGALANSVEDAAIVTAVMAGLDPDSWLSPA 244
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSL--KGFHKT 289
PA R+ V+ K F + +F+ + L +G
Sbjct: 245 P-------------PAGRLRAAVVPGLVKRFA-----SPEVSAWFEGLIHLLQSRGTIDI 286
Query: 290 NGELKNVMRLIQRY-------EFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
G ++ I R+ E H W+ K A D+ + E +
Sbjct: 287 AGSIELDADEIARHQANILGAEAYATHRAWLVDHKDAYGEDVRERLEEGARVDTASYAES 346
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----V 398
R R I + ++ P T P ++G + + LL+ + +
Sbjct: 347 LRFRARFRHFIRDMFAQYDCILLPVTPIPATRMGENSVWIHGEERAVRPLLTRFTNPWNL 406
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIAT 449
SG +++P G P + + + GGD LL + + +ADIA+
Sbjct: 407 SGAPAISIPAGQVSGLPMGLQIVGKPGGDARLLRIARRI------EADIAS 451
>gi|357386734|ref|YP_004901458.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pelagibacterium halotolerans B2]
gi|351595371|gb|AEQ53708.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pelagibacterium halotolerans B2]
Length = 436
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 128/271 (47%), Gaps = 22/271 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ ++ DLFD +G VT G A A + + V L GA G+T + EF
Sbjct: 66 PLAGILVSIKDLFDEKGQVTSAGSTILADAEPA-NADAEAVGRLRAAGAIGCGRTTMSEF 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS G N H+ P N S++ GGS+SG A++VA + D +LG DT G VR+P+A G
Sbjct: 125 AYSGVGLNPHFGNPGNIFDSSRISGGSTSGGALSVALGIADVALGSDTGGSVRIPAALNG 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ GF+PS AV G P+S S D++G AR K V H +L A SP +
Sbjct: 185 LCGFKPSQSAVPLDGAFPLSQSYDSIGPLARTIKHCSAV-HAVLS---ATAASPAK---- 236
Query: 237 DDCFELLKIPADRVVQVVIKSTEKL--FGRQVLKHENLG-EYFDSKVPSLKGFHKTNGEL 293
E L+I R + T+ F R + G D ++P L+GF
Sbjct: 237 ---RESLRIGVARGILTEGLDTQVAADFQRAIALLSAAGFALTDIELPMLEGF------- 286
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDI 324
NV R+I E H + ++ DP +
Sbjct: 287 GNVNRIIVASEAHAIHASRLARMQTEGDPHV 317
>gi|345564408|gb|EGX47371.1| hypothetical protein AOL_s00083g464 [Arthrobotrys oligospora ATCC
24927]
Length = 654
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 11/214 (5%)
Query: 42 QLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLV 101
+L+P P L + PL+ AV D+ D+ T +A+ H ++ T+ + L+
Sbjct: 220 ELIPVPSRLYTNSSLPLSSKRIAVKDIIDLRNLPTSASSKAYAQYHGSSKSTAEAIQHLI 279
Query: 102 EGGATCIGKTVVDEFAYSINGTNKH----YDTPTNPAAPSQM-PGGSSSGAAVAVAA-DL 155
GA IGKT +FA NG + P NP A + P GSS+G+AVAVA D
Sbjct: 280 SLGAVIIGKTKTTQFA---NGETARDWIDFQCPFNPRADGYLDPAGSSTGSAVAVAGYDW 336
Query: 156 VDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV 215
VDF++G D+ G + P+A G+ G RP+ G G++P S+ +DT+G+FARD + + +
Sbjct: 337 VDFAVGTDSCGSIIWPAALQGVFGLRPTLGVSELEGVMPYSSVMDTMGFFARDIQNFQLL 396
Query: 216 GHVLLQLPFAAQRSPRQIIIADDCFELLKIPADR 249
V ++ P +II+ + L P+D+
Sbjct: 397 QEVWYDKKGQRRQKPSRIIVPSGVLDSL--PSDK 428
>gi|90423196|ref|YP_531566.1| amidase [Rhodopseudomonas palustris BisB18]
gi|90105210|gb|ABD87247.1| Amidase [Rhodopseudomonas palustris BisB18]
Length = 449
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 174/399 (43%), Gaps = 37/399 (9%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
AP G+ ++ DLFDI+G VT G + A + V+ L G IG+T +
Sbjct: 67 APSAFAGIPVSIKDLFDIKGQVTRAGS-RALDDNPPAEADAAAVARLRRAGFVVIGRTNM 125
Query: 114 DEFAYSINGTNKHYDTP--TNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFAYS G N HY TP T +PGGSS+GAAV+VA + +LG DT G R+P
Sbjct: 126 TEFAYSGIGINPHYGTPKSTWQRDVGHVPGGSSAGAAVSVADGMAHGALGTDTGGSCRIP 185
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA--QRS 229
+AF G++GF+P+ V G +P+S +LD++G AR + + VL P R
Sbjct: 186 AAFNGVVGFKPTQARVPLDGAVPLSPTLDSIGPLARSVQCCATLDAVLADQPLTTLQSRP 245
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV-LKHENLGEYFDSKVPSLKGFHK 288
R + +A L D V Q ++ E L ++ + E+ D S KG
Sbjct: 246 VRGMRLAVPTTVALDDLDDAVAQAFERALETLSRAGAWIERIAVPEFLDVAPMSAKGGFT 305
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIR 346
RY N + + DP + I GE ++ + + + R
Sbjct: 306 AAESFA-----WHRYLIVANGDVY--------DPRVRDRIIRGETQSAADYI--DLINAR 350
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGC----- 401
+ + + L +V PTTA PPK+ L++D +AF+ ++ ++ C
Sbjct: 351 KSLVARATQRLSPYDAIVLPTTANTPPKIAD---LADD---KAFTKANLLALRNCTLINM 404
Query: 402 ---CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
C +++P + P + G D+ + + M
Sbjct: 405 IDGCAISLPCHRDGEVPVGLMLAGSAGTDQRIFELAAGM 443
>gi|54297650|ref|YP_124019.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila str. Paris]
gi|81601798|sp|Q5X4H5.1|GATA_LEGPA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|53751435|emb|CAH12853.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila str. Paris]
Length = 483
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 185/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++PGGSS G+A AVA +LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGEYFDSKV 280
D +K P D++ +Q I + KLF ENLG
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHNAVKLF-------ENLGAEIIEID 294
Query: 281 PSLKGF------------HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
L+ F +N + +R R + + IE + + E+
Sbjct: 295 LKLQPFWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + + L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++ QN + ++A+ ++G +++P G+ +K P + + +H + LL
Sbjct: 410 KINDPIQNYLADVFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>gi|326315597|ref|YP_004233269.1| amidase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323372433|gb|ADX44702.1| Amidase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 457
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 89/153 (58%), Gaps = 1/153 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL GL +V DLFD+ G VT G A T AA V G A +G+T +
Sbjct: 72 PSPLAGLPVSVKDLFDVRGQVTRAGSAVLADTGPAAHDAVAVARLRAAG-AVLLGRTNMS 130
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N H+ TP NP ++ GGSSSGAA VA DL +LG DT G +R+PSAF
Sbjct: 131 EFAFSGLGLNPHHGTPANPRDAGRVTGGSSSGAAATVALDLAAAALGTDTGGSIRIPSAF 190
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG+ GF+P+ V G P+S SLD++G AR
Sbjct: 191 CGLTGFKPTARRVPLAGAYPLSRSLDSIGPLAR 223
>gi|258511317|ref|YP_003184751.1| amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM
446]
gi|257478043|gb|ACV58362.1| Amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM
446]
Length = 454
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 170/405 (41%), Gaps = 39/405 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ +V DL D T +GH + R H RT+ V+ L A IGK + EFA
Sbjct: 73 LAGIPISVKDLIDTSFLPTTYGHGRF-REH-VPDRTALCVARLQRAHALIIGKAHLHEFA 130
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ + N H+ NP PS++ GGSS G+A +V + S+G DT G VR+P+A G
Sbjct: 131 FGVTNENPHFGPARNPRDPSRITGGSSGGSAASVVGGMAQASVGTDTGGSVRIPAALTGC 190
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
+GF+PSYG V G++P++ +LD HVG + + AA + I
Sbjct: 191 VGFKPSYGLVPTDGVLPLAPTLD-------------HVGTLANSVEDAAIVTAVMAGIDP 237
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD--SKVPSLKGFHKTNGELKN 295
D + PA R+ VI F + +F+ + V +G + G +
Sbjct: 238 DTWLSPPSPAGRLRVAVIPGLVSRFA-----SPEVSAWFEGLTHVLQSRGTIELAGSIDL 292
Query: 296 VMRLIQRY-------EFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
I R+ E H W+ + A D+ + + + R
Sbjct: 293 DADEIARHQANILGAEAYATHRAWLAEHRDAYGADVRERLEDGARVDTASYAESLRFRAR 352
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----VSGCCQV 404
R AI + ++ PTT P ++G K + + LL+ + +SG +
Sbjct: 353 FRDAIREVFARYDCILLPTTPIPATRIGEKAVWIHGEERAVRPLLTRFTNPWNLSGAPAI 412
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIAT 449
++P G P + + + GGD LL + + +ADIA+
Sbjct: 413 SIPAGQVSGLPMGLQIVGKPGGDARLLRIARRI------EADIAS 451
>gi|420243236|ref|ZP_14747184.1| allophanate hydrolase, partial [Rhizobium sp. CF080]
gi|398062991|gb|EJL54752.1| allophanate hydrolase, partial [Rhizobium sp. CF080]
Length = 460
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P++A + +TVV L GA IGKT +D+F
Sbjct: 66 PLFGIPFAVKDNIDVAGMPTTAACPDYAYM---PEKDATVVGLLKAAGAFVIGKTNLDQF 122
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N +PGGSSSG+AVA A +V F+LG DT G R+P+
Sbjct: 123 ATGLVGVRSPYPIPRNAIDAKLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRIPAGLNN 182
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS GA+S GIIP +LD V FA
Sbjct: 183 IVGLKPSVGALSTTGIIPACRTLDCVSIFA 212
>gi|381205845|ref|ZP_09912916.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 489
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 181/416 (43%), Gaps = 45/416 (10%)
Query: 58 LTGLSFAVSDLFDIE--GYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
L GL A+ D IE TG HS +TVV +L E A IG T +DE
Sbjct: 71 LAGLPVAIKDNISIEDPNLTTGCSSKILDGYHSPYD--ATVVKSLKEQDALVIGTTNMDE 128
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + N Y NP S++PGGSS GAAVAVA + +LG DT G VR P++FC
Sbjct: 129 FAMGSSNENSSYGPTLNPWDSSRVPGGSSGGAAVAVATGMAVAALGSDTGGSVRQPASFC 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
GI GF+P+YGA+S G++ +SLD VG R + ++ + + S Q +
Sbjct: 189 GITGFKPTYGALSRYGLVAYGSSLDQVGCLTRTAEDSAYLFDAIQGVDTKDSTSLAQRLD 248
Query: 236 ADD----------CFELLKIPADRVVQVVIKSTEKL---FGRQ--VLKHENLGEYFDSKV 280
+ D C + ++ V+++T L G+Q ++ ++LG + D +
Sbjct: 249 SYDGQIDLRSLKFCLPNEYLDSETASGDVLEATISLADWLGKQGATVEKKSLG-FLDCLI 307
Query: 281 PS--LKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV 338
P+ + F + + L + RY + + E K + D E+ + + V
Sbjct: 308 PAYYVISFAEASSNLGRFDGI--RYGVRRSSGSLDELYKKSRDSGFGIEVKRRIMLGTFV 365
Query: 339 IE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE-----MLSED 384
+ IR + I +LL + L+ P + P + G K M ED
Sbjct: 366 LSAGYYESYYGKANQIRTFIEKKIHALLAEFDFLIGPVSPGVPFEFGEKNDNPLAMYLED 425
Query: 385 YQNRAFSLLSIASVSGCCQVTVPLGYY-DKCPTSVSFIARHGGDRFLLDTVQNMYA 439
+S+L A+ + C +++P G +K P +++ D LL + A
Sbjct: 426 ----IYSVL--ANFTRCPAISMPAGMSKEKLPIGFQLMSKPLDDHRLLKVCAEIQA 475
>gi|421464879|ref|ZP_15913568.1| amidase [Acinetobacter radioresistens WC-A-157]
gi|400204808|gb|EJO35791.1| amidase [Acinetobacter radioresistens WC-A-157]
Length = 370
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 172/378 (45%), Gaps = 42/378 (11%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+ V D +I+G T G T AA R + VV ++ KT + E A+ I
Sbjct: 15 LTVMVKDSINIQGVKTISGSRALEDTAPAA-RNAEVVEHILNADCMITAKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N Y TP NP +PGGSSSG+A AVAA+L DF+LG DT G +R+P+A CG+ G
Sbjct: 74 TGINHAYGTPVNPKYLELIPGGSSSGSAAAVAANLADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+P++G VS G+ P +SLD VG FA +++ ++ F AQ D
Sbjct: 134 KPTFGRVSRQGVHPAQSSLDCVGPFANSVEMIETAMQII-DPTFTAQ----------DSA 182
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLI 300
K+ +V Q + TE + LK NL K FH M++I
Sbjct: 183 AAPKLAWLKVQQAEAEVTECI--ENYLKQANLQVEPVEAASFEKAFHAG-------MQII 233
Query: 301 QRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETVIENCKS---IRNEMRSAISSL 356
YE N + E +K L I A++ G +L+ +ET +E + ++ E I +L
Sbjct: 234 -NYE---NWQAYGELIKTGL---IGADVQGRLLKAAETTLEQVQQAEQVKAEFTQEIDAL 286
Query: 357 LKDDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
L+ L+ PT PPK+ E L+ R F+L SG +++PL
Sbjct: 287 LEQYDALLLPTLPKIPPKVADAENTVAFLNLTGLVRPFNL------SGHPAISIPLETEQ 340
Query: 413 KCPTSVSFIARHGGDRFL 430
P + + + D L
Sbjct: 341 GSPVGLQIVTKRNADEQL 358
>gi|332530839|ref|ZP_08406765.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332039751|gb|EGI76151.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 442
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 122/239 (51%), Gaps = 15/239 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GLS +V DLF++ T G + A S ST V+ L GA IG+T + EF
Sbjct: 62 PLAGLSVSVKDLFNVRDQTTAAGSLVLHQAPVAQS-DSTAVARLRAAGAAFIGRTNMSEF 120
Query: 117 AYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+S G N H+ TP+NPA Q +PGGSSSGAAV+VA LG DT G +R+P+A
Sbjct: 121 AFSGVGINPHHGTPSNPAYTDQPRIPGGSSSGAAVSVAIGASFIGLGSDTGGSIRIPAAL 180
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK--ILRHVGHVLLQLPFAAQRSPRQ 232
G++GF+ + V G +P+S++LDTV R + IL H +L +A+ PR
Sbjct: 181 QGLVGFKSTARLVPTDGALPLSSTLDTVCAITRSVRDAILAH--EIL-----SARVVPRL 233
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG-EYFDSKVPSLKGFHKTN 290
DC +P ++ + + F R + +LG + D +P L+ N
Sbjct: 234 KKTLGDC--RFAVPRTLMLDDLEPPVARAFDRALQTLRSLGAQVKDITLPELEELSAIN 290
>gi|332285564|ref|YP_004417475.1| amidase [Pusillimonas sp. T7-7]
gi|330429517|gb|AEC20851.1| amidase [Pusillimonas sp. T7-7]
Length = 451
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 163/381 (42%), Gaps = 22/381 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GLS + FD+EG+ T G A + S +VS L + A + +T + EF
Sbjct: 56 PLAGLSCTIKACFDVEGWTTHAGSVALLGA-PPAQQDSALVSRLRQSDALILAQTNMTEF 114
Query: 117 AYSINGTNKHYDTPTNPAA--PSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY G N ++ TP P + GGSSSGAAV+VA VDF+L DT G VR+P+AF
Sbjct: 115 AYGALGLNTYFGTPRTPLCVDGEHVAGGSSSGAAVSVALGFVDFALCSDTSGSVRIPAAF 174
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG +G PS G G++ +S S D G A+ + V L P A + +
Sbjct: 175 CGAVGMMPSAGRFDTRGMLGLSPSFDVPGIIAKSVSVCTRVYETLCDKP-AVHATAMESA 233
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQV--LKHENLGEYFD--SKVPSLKGFHKTN 290
D L +P V +LF R V L+ + + S + +
Sbjct: 234 ATDPRLVSLCVPESVFGADVEPGVLELFHRAVDLLRAQGVTVVRRDISSISGVGAIAADG 293
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
G + + R +++ V+ ++ A + E ++E E++
Sbjct: 294 GIIAADAYALHRDLLARYGDDYDPLVRRRIEAGALAPAWKYGEAQRALVERSAQFETELQ 353
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED----YQNRAFSLLSIASVSGCCQVTV 406
D +L TPT+ PP+L ++ E+ ++F+ +A+ G +++
Sbjct: 354 GF-------DAVL-TPTSPIFPPRL--SDLRDEERYLALNKKSFAFTELANRLGKPSISM 403
Query: 407 PLGYYDKCPTSVSFIARHGGD 427
PLG PT++ + G D
Sbjct: 404 PLGSVSSKPTALLLTGKAGHD 424
>gi|374632201|ref|ZP_09704575.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Metallosphaera yellowstonensis MK1]
gi|373526031|gb|EHP70811.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Metallosphaera yellowstonensis MK1]
Length = 389
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 182/390 (46%), Gaps = 32/390 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL+GL+F + D+ + G T G ++ + VV ++E G T +GKT EF
Sbjct: 25 PLSGLTFGIKDIIETAGIRTTAGSR--ILSNYVPKNDAWVVKRVLELGGTILGKTNTHEF 82
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A T+ NP P ++ GGSS G+AVAV +VD +G DT G VR+P++ CG
Sbjct: 83 AVGATNTSSIAGPARNPRDPERISGGSSGGSAVAVGLGIVDVGVGTDTGGSVRIPASLCG 142
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
++G++P+ G + G+IP S +LDT+G+ RD ++L V V+ P R++ ++
Sbjct: 143 VIGYKPTTGILPKSGVIPFSWTLDTIGFLTRDFEVLWRV--VVNVTPVET----RKVFMS 196
Query: 237 DDCFEL---LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
++ L + + V V ++ + FG ++K SL K G++
Sbjct: 197 KGGTKIRAGLFMFGEDEVSVKLRDRVEEFGLDIVKV------------SLPNLEKEGGKV 244
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+ R I E + H +W+ S PD+ + L ++ N R +
Sbjct: 245 R---RTIAVSEGASYHMDWLNSRAQEYFPDVREVLSSGLSVTAVDYINSLRKRRLLLEEY 301
Query: 354 SSLLKDDGILVTPTTAYPPPKLG---GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
+ KD ++++PTT PK+ GKE ++++++ + + ++ G +++P
Sbjct: 302 VGVFKDVDVVLSPTTKMVAPKIHDVLGKE---KEFRDKLVGITELFNLVGAPSISIPFLE 358
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYAS 440
+ P + D +LD + + +S
Sbjct: 359 LEGLPVGLMVSGPPYRDGTVLDVAKYLISS 388
>gi|345304336|ref|YP_004826238.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
SG0.5JP17-172]
gi|345113569|gb|AEN74401.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
SG0.5JP17-172]
Length = 491
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L GL AV D+ I+ G S +TV++ L E GA
Sbjct: 64 EPLPP-----LGGLVLAVKDVICIKDQRVTCGSRMLENFVSLYD--ATVIARLREAGAIF 116
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
IGK DEFA + ++ NP P +PGGSS G+AVAVAA + +LG DT G
Sbjct: 117 IGKANCDEFAMGSSNETSYFGPARNPINPDYVPGGSSGGSAVAVAARMCQAALGSDTGGS 176
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 203
+R P+AFCGI+G +P+YG VS G++ ++S DT+G
Sbjct: 177 IRQPAAFCGIVGLKPTYGRVSRYGLVAYASSFDTIG 212
>gi|378729632|gb|EHY56091.1| glutamyl-tRNA (Gln) amidotransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 632
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL FAV D ++G TG+G+ W H +T+ + L++ GA +GK EF
Sbjct: 174 PLAGLRFAVKDTISVKGTRTGYGNQAWREIHDPEKKTAPCIKLLLQAGAVLVGKLKTTEF 233
Query: 117 AYSINGTNK-HYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVPSA 173
A ++ D P NP Q P SS+G+AVA AA D +DF++G DT G +R P+
Sbjct: 234 AEGLDPNEWIDDDCPYNPRGDGRQKPSSSSTGSAVAAAAYDWIDFTVGTDTGGSIRHPAG 293
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ 221
G+ G RPS+G +S G++ + +T+G FAR I VG L+
Sbjct: 294 VNGVYGQRPSHGLISLEGVLGATDLFNTIGIFARHASIFARVGAHLVH 341
>gi|294055598|ref|YP_003549256.1| allophanate hydrolase [Coraliomargarita akajimensis DSM 45221]
gi|293614931|gb|ADE55086.1| allophanate hydrolase [Coraliomargarita akajimensis DSM 45221]
Length = 574
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FA+ D D+ T + T ++ VV L++ GA +GKT +D+F
Sbjct: 65 PLYGIPFAIKDNIDLACVPTTAACEAYGYTPEL---SAPVVEKLLQAGAIPMGKTNLDQF 121
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P NP AP ++PGGSSSG+AVA++ LV FSLG DT G RVP+ F
Sbjct: 122 ATGLVGVRSPYGVPRNPIAPDRVPGGSSSGSAVALSEGLVSFSLGTDTAGSGRVPAMFNK 181
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+ G +PS G +S G++P +LD V FA
Sbjct: 182 LWGLKPSRGRLSTSGVVPACRTLDCVSIFA 211
>gi|352681239|ref|YP_004891763.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Thermoproteus
tenax Kra 1]
gi|350274038|emb|CCC80683.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Thermoproteus
tenax Kra 1]
Length = 412
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 174/355 (49%), Gaps = 35/355 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ AV D D+ G T G P +AR T+ +V+ L E GA +GKT + E A
Sbjct: 58 LLGVVVAVKDNIDVAGLPTTNGAP-YAR--EVPELTAPIVTALEEEGALVLGKTNMHELA 114
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
N H+ NP PS++ GGSS G+A AVA + +LG DT G VR+P++ CG+
Sbjct: 115 LGATNVNPHFGPTLNPRDPSRITGGSSGGSAGAVALGIAHIALGTDTGGSVRIPASLCGV 174
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
+G++P YGA+S G+ P++ SLD +G+F K L ++ VL L A+ PR
Sbjct: 175 VGYKPPYGALSLEGVRPLAPSLDHLGFFTSTVKDLVYLMSVLRGL--RAEPPPRF----- 227
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGFHKTNGELKNV 296
F +LK A+ V EK F R V K E+ GE ++ +V + K F +
Sbjct: 228 -RFGILKGIAEPDEYV-----EKAFWRAVAKLESAGGERWEVEVNARK-FSYARAAILLA 280
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIE----NCKSIRNEMRSA 352
+ + H +P++ ++ +L++ ++ I+ E +S
Sbjct: 281 EAASVNWGYLRRH-----------EPEMGRDVATLLKVGASLPAVAYLRALEIQREAKSY 329
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVP 407
+SLLK +LVTPTTA P + +E + + + + + +++G ++VP
Sbjct: 330 FNSLLKRYDVLVTPTTAIAAPPV--EEANTIAIRPKLLAYTELFNLAGLPAISVP 382
>gi|148254039|ref|YP_001238624.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bradyrhizobium sp.
BTAi1]
gi|146406212|gb|ABQ34718.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Bradyrhizobium sp. BTAi1]
Length = 471
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 39 EKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVS 98
+L+ L P Q + PL G+ F+V D D G+ T P ++ +A S V
Sbjct: 60 RQLEALTPAQ----REALPLWGIPFSVKDCIDAAGFATTSACPGFSYLPAA---NSPSVE 112
Query: 99 TLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDF 158
L+ GA IGKT +D+FA + GT Y NP + +PGGSSSGAAV+VA+ LV
Sbjct: 113 RLLAAGAILIGKTNMDQFATGLVGTRSPYGVARNPFDAAYIPGGSSSGAAVSVASGLVSV 172
Query: 159 SLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+LG DT G RVP+AF I+G +P+ G +S G +P S++TV FA
Sbjct: 173 ALGTDTGGSGRVPAAFNNIVGLKPTRGLISGAGTVPACRSIETVSIFA 220
>gi|154245002|ref|YP_001415960.1| amidase [Xanthobacter autotrophicus Py2]
gi|154159087|gb|ABS66303.1| Amidase [Xanthobacter autotrophicus Py2]
Length = 369
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 172/392 (43%), Gaps = 56/392 (14%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G AV D DI G T G A + A+ + VV+ + G +GKT + E A+
Sbjct: 14 GPRVAVKDTIDIAGEPTMAGSRALADA-APATEHAEVVARALAAGCRIVGKTTLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N TP NP P +PGGSSSG+A AVAA L DF+LG DT G VR+P+A CG+ G
Sbjct: 73 VTGINDWSGTPENPKWPHLVPGGSSSGSAAAVAAGLADFALGTDTGGSVRIPAACCGVFG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
+P++G VS G++P +++D VG A +L R + I D
Sbjct: 133 LKPTFGRVSRHGVMPTDSTIDCVGPIATSADMLM-----------------RAMEIIDPT 175
Query: 240 FELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG----EYFDSKVPSLK-----GFHKTN 290
F + A R+ +V +K+ + R V +E L E D K+ L+ G N
Sbjct: 176 FARRSVNAPRIGRVAVKANPAIH-RAV--NEALAASGVESRDVKLAGLEAAFSAGLAIIN 232
Query: 291 GE-LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
E + + L+Q + D++ + + ++ I + +R
Sbjct: 233 AENVTGLGHLLQTGLVGD---------------DVARRLAQAAAVTREEIAAAEFVRAAF 277
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKL----GGKEMLSEDYQNRAFSLLSIASVSGCCQVT 405
+ I +LL+ +LV PT PP L G + R F+L SG VT
Sbjct: 278 TAEIDALLEALDVLVLPTMPEFPPALAEARGDLSAVGMTTFVRPFNL------SGHPAVT 331
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
VPL + P + + R G D +L + +
Sbjct: 332 VPLLAENGAPAGLQIVGRKGEDALVLAVAERV 363
>gi|302403847|ref|XP_002999762.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium
albo-atrum VaMs.102]
gi|261361518|gb|EEY23946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium
albo-atrum VaMs.102]
Length = 720
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 175/415 (42%), Gaps = 41/415 (9%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L G+ F V D D+EG T P +A A T+T V +++ G
Sbjct: 315 KPLPP-----LFGVPFGVKDSIDVEGIETTAACPSYAYVPKA---TATCVQHILDAGGIY 366
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
+GKT +D+ A ++G Y P + + + GGSSSG VAVAA LV F++ DT G
Sbjct: 367 VGKTNLDQLATGLSGCRSPYGVPHSIFSKDLIAGGSSSGGCVAVAARLVPFTVATDTAGS 426
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
RVP+AF G++GF+P+ G +S G+IP +LD++ A R V V+ + A
Sbjct: 427 GRVPAAFNGVVGFKPTKGTISARGLIPACKTLDSIAIVATSVADARAVWRVIAKHDKADP 486
Query: 228 RS--PRQIIIADDCFELLK-------IPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS 278
S P + F LK +P ++ +LF V K ++ G +
Sbjct: 487 YSKLPHTLPTWKTDFRGLKDGGFDFAVPPPAALEACTPEYRRLFAEAVKKLQSAGGRLRN 546
Query: 279 KVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIES------VKPALDPDISAEIGEML 332
+ F + L L +R E++ S + P + S + +
Sbjct: 547 T--DWEAFERAGELLYEGALLHERITCIG--REFLRSSIQDGGLHPVIQKLFSDALNKAP 602
Query: 333 EISETVIENCKSIRNEMRS--AISSLLKDDGILVTPTTAYPPPKLGGKEMLSED---YQN 387
+ + + R+ A +L +LV PTT P E ++ D
Sbjct: 603 DAYDVFRDQATQAELSRRTHMAFDTLSGGVDVLVVPTTVCHPT----FEEIAADPIRLNA 658
Query: 388 RAFSLLSIASVSGCCQVTVPLGYY-----DKCPTSVSFIARHGGDRFLLDTVQNM 437
R + A++ C ++VP G Y + P V+ +A G D LD + +
Sbjct: 659 RLGTFTHFANIVDLCGLSVPAGTYLDEKETELPFGVTILAGSGFDAKALDVARVL 713
>gi|338971598|ref|ZP_08626983.1| amidase [Bradyrhizobiaceae bacterium SG-6C]
gi|338235158|gb|EGP10263.1| amidase [Bradyrhizobiaceae bacterium SG-6C]
Length = 383
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 144/333 (43%), Gaps = 38/333 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWA-RTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL+ L AV D ++EG GH +A RT RT++ V L + GA +G T D
Sbjct: 13 PLSDLRVAVKDNIEVEGLAFTAGHRLYAMRT---GQRTASAVRKLEDAGAFVVGTTFTDS 69
Query: 116 FAYSINGTNKHYDTP--TNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
+ + TP NP + GGSS G+AVAVA + +G DT G +R+P+A
Sbjct: 70 GGFGVT-------TPAVVNPIDAAVTAGGSSGGSAVAVARGFAELGIGTDTAGSIRIPAA 122
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
CG+ GF+PSYG V G+ P+STS D VG A K L + +++
Sbjct: 123 CCGLYGFKPSYGLVPLDGVWPLSTSFDHVGLLA---KTLDELDRASMEM----------- 168
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKH------ENLGEYFDSKVPSLKGFH 287
D +L +P D V + ++ F V+ E L E S VP
Sbjct: 169 --MDASMQLSSLPKDARVMIGVECESPAFRDPVICQRLNEAIERLAETGHSIVPVDLPDR 226
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
+T V+ L+ E + E + + L P + IS I K+
Sbjct: 227 ETCMRAHGVITLL---EAARTYGELLPAEMGMLGPAAIRALRSSESISAEDIRAAKAHLT 283
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
++R+ ++ L + +L+ PT A PP + M
Sbjct: 284 KIRAHMNELFEAVDMLLVPTLAGRPPAHDARHM 316
>gi|359460300|ref|ZP_09248863.1| amidase [Acaryochloris sp. CCMEE 5410]
Length = 464
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDI G VT G + ++ AS +T V+ L GA +G +DE+
Sbjct: 66 PLAGVPFAVKNLFDIAGTVTLAGS-KINQSQPPASHDATAVARLKAAGAILVGALNMDEY 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP P++M GGSS G+A AVAA LV +LG DT G +RVP++ CG
Sbjct: 125 AYGFVTINHHYGVTPNPHDPTRMSGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPASLCG 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+ GF+P+YG +S G S+SLD +G FAR
Sbjct: 185 VYGFKPTYGRLSRAGAYLFSSSLDHIGPFAR 215
>gi|327306623|ref|XP_003238003.1| glutamyl-tRNA(Gln) amidotransferase [Trichophyton rubrum CBS
118892]
gi|326461001|gb|EGD86454.1| glutamyl-tRNA(Gln) amidotransferase [Trichophyton rubrum CBS
118892]
Length = 627
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ V D+FD++G T G+ W + + AA+RT+ V LV+ GA +GK
Sbjct: 202 AQKPLAGVRLGVKDIFDVKGLKTSNGNRAWYQLYPAANRTAIAVQNLVDAGAVVVGKMKT 261
Query: 114 DEFAYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVR 169
+FA T Y P NP Q PG SS+G A AA +D +LG DT G +R
Sbjct: 262 SQFANGETATADWVDYHAPFNPRGDGYQDPGSSSAGCAAGEAAYPWLDIALGSDTGGSIR 321
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
PS G+ G RPS+G VS G +P++ DT G ARDP++
Sbjct: 322 SPSQLQGLFGNRPSHGLVSLEGAMPLAPQFDTAGLIARDPRL 363
>gi|187921072|ref|YP_001890104.1| amidase [Burkholderia phytofirmans PsJN]
gi|187719510|gb|ACD20733.1| Amidase [Burkholderia phytofirmans PsJN]
Length = 466
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 175/416 (42%), Gaps = 61/416 (14%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL + D + T FG A + VV + E G GK + E +
Sbjct: 62 LPGLPIGIKDSYMTRDLPTSFGTAVAADFRPTTD--ARVVKAMREAGLLVFGKNNLVEMS 119
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y + G N HY NP P + GGSS G A +VAA LV +LG DTVG +RVPS+ CG+
Sbjct: 120 YGLTGLNGHYGQAKNPYNPLHITGGSSCGGAASVAARLVPAALGGDTVGSIRVPSSLCGV 179
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKILRHVG-----------HVLLQLP 223
+GF+P+ G S G+ PIS +LDT G AR D ++L + H L +
Sbjct: 180 VGFKPTPGRWSSKGVAPISGTLDTTGAIARRVADCELLDSIATGSHSRINRAIHGLKGIK 239
Query: 224 FAAQRSPRQII---------IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE 274
A +PR + + ++ LK VV+V + + FG ++ H N
Sbjct: 240 LAI--APRYYLDGADPEIEKLFNETVRKLKDAGAHVVEVDLGAD---FG-SLVAHGNWSV 293
Query: 275 YFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
+F P + F + NG V ++ E + W SV P G
Sbjct: 294 FFHETQPDVTIFLRENGVPVTVEQIYDGLE-PHIKASWTRSVLPT---------GPNYTT 343
Query: 335 SETVIENCKSIRNEMRSAISSLL--KDDGILVTPTTAYPPPKLGGKEMLSEDYQ------ 386
+ + + R E++ +L K D ++ PTT P +++E +Q
Sbjct: 344 DASYKDALLNSRPEVQRRYGNLAFSKADAVIF-PTTLCQAP------LITEQWQYPVAGK 396
Query: 387 --NRAFSLLSI--ASVSGCCQVTVPLGYYDK-CPTSVSFIARHGGDRFLLDTVQNM 437
N F + AS +G +++P+G + P + A HG D+ LL + +
Sbjct: 397 VVNDTFLSRNTYPASFAGLPGISLPMGLLNSGLPVGLEIDAGHGSDKELLQLARRI 452
>gi|409405650|ref|ZP_11254112.1| amidase family protein [Herbaspirillum sp. GW103]
gi|386434199|gb|EIJ47024.1| amidase family protein [Herbaspirillum sp. GW103]
Length = 450
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 169/384 (44%), Gaps = 22/384 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +V DLFD+ G T G R AA+ + VV L++ GA IGKT + EF
Sbjct: 68 PLEGVPVSVKDLFDVAGETTLAGSVVL-RGKPAAAAHAVVVQNLLKAGAIVIGKTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNP----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
AYS G N HY TP N ++PGGSSSGAA++V + ++G DT G VR+PS
Sbjct: 127 AYSGLGINPHYGTPQNAWERNVEGGRIPGGSSSGAAISVTDGMAFAAVGSDTGGSVRIPS 186
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A G+ GF+P+ VS G++P+S LD++G A + + VL + +
Sbjct: 187 ALNGLTGFKPTAARVSMQGVLPLSAYLDSIGPLAVSVECCAIMDAVLAGEAYVS------ 240
Query: 233 IIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTN 290
++A L L P + V+ + ++ K + + K G ++VP+ N
Sbjct: 241 -VVAHPLRGLRLLAPTNIVLDGMDETVGKAYRAALDKLAAAGAVIVQAEVPAFNALAAIN 299
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
K + Y + H I D + + I ++S + + R
Sbjct: 300 A--KGGFTAAEAYAW---HRALIAENAAGYDQRVVSRILRGKDMSAADLLDVLHARPRWI 354
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTVP 407
+ + + L LV PT P++ + + Y +L ++ + C V++P
Sbjct: 355 AEVQAQLAGYDALVMPTVPIVAPRIAELQASDDAYYAANGKMLRNPTLINFLDGCAVSLP 414
Query: 408 LGYYDKCPTSVSFIARHGGDRFLL 431
P +S A G D+ LL
Sbjct: 415 CHAAGSAPVGLSLAAAGGADKRLL 438
>gi|395007807|ref|ZP_10391513.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
gi|394314205|gb|EJE51144.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
Length = 471
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 4/153 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G++ AV DLF++EG G AR ++ ++ VV L GA +GKT EF
Sbjct: 75 PLHGVAVAVKDLFEVEGKPIAAGSK--ARPPRTSATSAAVVERLRAAGAVVVGKTHTVEF 132
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+ GTN TP NP + PGGSSSG+AVA+AA L S+G DT G VR+P+
Sbjct: 133 AFGGWGTNAVMGTPWNPWDLRTHRTPGGSSSGSAVALAAGLCTASIGTDTGGSVRIPAGL 192
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG++G + + G +S G+I + + DTVG R
Sbjct: 193 CGVVGLKTTRGLISRHGLIELCPTHDTVGPLTR 225
>gi|182416528|ref|ZP_02947955.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
butyricum 5521]
gi|237667757|ref|ZP_04527741.1| glutamyl-tRNA(Gln) amidotransferase subunit A 2 (Glu-ADTsubunit A
2) [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379600|gb|EDT77082.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
butyricum 5521]
gi|237656105|gb|EEP53661.1| glutamyl-tRNA(Gln) amidotransferase subunit A 2 (Glu-ADTsubunit A
2) [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 479
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 75/115 (65%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+TVV L+E A IGKT +DEFA + N + NP S++PGGSS G+A VAA
Sbjct: 102 ATVVKKLLEEDAVIIGKTNMDEFAMGSSTENSAFKKTANPRDLSRVPGGSSGGSAAVVAA 161
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
D+ SLG DT G +R P++FCG++G +P+YG VS G++ +SLD +G F+++
Sbjct: 162 DMCPVSLGSDTGGSIRQPASFCGVVGLKPTYGLVSRFGLVAFGSSLDQIGPFSQN 216
>gi|445415424|ref|ZP_21434113.1| amidase [Acinetobacter sp. WC-743]
gi|444763079|gb|ELW87422.1| amidase [Acinetobacter sp. WC-743]
Length = 370
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 44/380 (11%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
L V D DI+G T G T AA++ + VV ++ GKT + E A+
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGSQALMNT-PAATQNAEVVDRILAADCQITGKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
I G N H+ T NP P +PGGSSSG+A AVAA L DF+LG DT G +R+P+A CG+ G
Sbjct: 73 ITGINHHFGTAINPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
+P++ VS G+ P +SLD VG FA ++ ++ P +
Sbjct: 133 LKPTFDRVSRQGVHPAVSSLDCVGPFAMSVNMIETAMQII-----DPSFHPLTDLAQAPK 187
Query: 240 FELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGFHKTNGELKNVMR 298
L + AD VVI+S + L + ++FD P+ + M+
Sbjct: 188 LAWLDVSADA---VVIESIQNYLANANLTLTKVKSKWFD---PAFEAG----------MQ 231
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETV---IENCKSIRNEMRSAIS 354
+I N+ W + A++ G +L+ ++T ++ + I+ ++ I
Sbjct: 232 II-------NYENWQAYAALTETGLVGADVNGRLLKAAQTTMDQVQQAEQIKANFKAEID 284
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL L+ PT PPK +SE AF SL+ ++SG +++PL
Sbjct: 285 ALLAQFDALILPTLPQIPPK------VSEAENTVAFLNLTSLVRPFNLSGHPAISIPLQT 338
Query: 411 YDKCPTSVSFIARHGGDRFL 430
P + +A+ D +L
Sbjct: 339 ASGLPIGLQIVAKQNADEYL 358
>gi|54294624|ref|YP_127039.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila str. Lens]
gi|81601316|sp|Q5WVW0.1|GATA_LEGPL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|53754456|emb|CAH15940.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila str. Lens]
Length = 483
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 184/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++PGGSS G+A AVA LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSADRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGE---YFD 277
D +K P D++ +Q I KLF ENLG D
Sbjct: 242 PDYSTEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLF-------ENLGAEIIEID 294
Query: 278 SKVPSL---------KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
K+ L +N + +R R + + IE + + E+
Sbjct: 295 LKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + ++L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITILNSVDVILGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ + QN + ++A+ ++G +++P G+ +K P + + +H + LL
Sbjct: 410 KIDDPIQNYLADVFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSENRLL 462
>gi|367478147|ref|ZP_09477468.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 285]
gi|365269536|emb|CCD89936.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 285]
Length = 475
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFD+EG T G + R + ASR +T++ + GA +G + E+
Sbjct: 74 PLAGVPFAVKNLFDVEGLPTRAGS-KINRDRAPASRDATLIERMESAGAVLVGALNMGEY 132
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP PS+M GGSS G+ AV LV +LG DT G +RVPS+FCG
Sbjct: 133 AYDFTGENVHDGPSRNPHDPSRMSGGSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCG 192
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
I G +P+YG +S P SLD +G FAR
Sbjct: 193 IFGLKPTYGRLSRARSFPFVMSLDHLGPFAR 223
>gi|270308501|ref|YP_003330559.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase
[Dehalococcoides sp. VS]
gi|270154393|gb|ACZ62231.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase
[Dehalococcoides sp. VS]
Length = 486
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 171/404 (42%), Gaps = 33/404 (8%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PLTG+ A+ D+ +G T + + VV L E GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAEEGAVLLGKTNMDE 126
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + N + T NP +++PGGSS G+A VAA FSLG DT G +R P++FC
Sbjct: 127 FAMGSSTENSAFFTTRNPWNTAKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-PRQII 234
+ G +PSYG VS G++ ++SLD +G F +D V + + S P+ +
Sbjct: 187 SVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKDVLDCALVMNAIAGFDDRDSTSVPQTVP 246
Query: 235 IADDCFE------LLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP------S 282
C + L +P + Q + + + LG D +V +
Sbjct: 247 DFSSCLDGDIKGFKLGVPKEYFSQNMRADIAEKINDALSVLSGLGASVDHEVSLPHTPYA 306
Query: 283 LKGFH-----KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET 337
L ++ + + L + Y + N W E+++ E+ + I
Sbjct: 307 LAVYYILAPSEASANLSRYDGVKYGYSYNQTENMW-EAMEKTRAKGFGPEVKRRIMIGTY 365
Query: 338 VIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNR 388
+ + +R + ++ + L+TPTT P +G E LS+ ++
Sbjct: 366 ALSAGYYDAWYVKAQKVRTLISQEFNNAFEKYDALITPTTPNLPFSIG--EKLSDPFEMY 423
Query: 389 AFSLLSIA-SVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+I +++G +++P G+ D P + I + D+ ++
Sbjct: 424 MCDTCTIPINIAGLPAISIPAGFVDGLPVGLQIIGKPFADQTIM 467
>gi|452209812|ref|YP_007489926.1| Aspartyl-tRNA amidotransferase subunit A [Methanosarcina mazei
Tuc01]
gi|452099714|gb|AGF96654.1| Aspartyl-tRNA amidotransferase subunit A [Methanosarcina mazei
Tuc01]
Length = 475
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 175/439 (39%), Gaps = 74/439 (16%)
Query: 57 PLTGLSFAVSDLFDI------------EGYVTGFGHPEWARTHSAASRTSTVVSTLVEGG 104
PL G+ A+ D + EGYV F + V+ L+ G
Sbjct: 60 PLAGVPIAIKDNISVVGLPNSCGSKILEGYVPPF--------------NAHVIEKLLSAG 105
Query: 105 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDT 164
A +GKT +DEFA + H+ NP ++PGGSS G+A VAA F+LG DT
Sbjct: 106 AVILGKTNMDEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDT 165
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
G VR P++FCG++G +P+YGAVS G++ + SL+ VG A + V + + +
Sbjct: 166 GGSVRCPASFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANN------VEDIAVLMDV 219
Query: 225 AAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
A R D E LK D V + I ++ FG + H ++ + + +
Sbjct: 220 IAGYDRRDSTSIDSKTEYLKALVDDVKGLKIGVPKEFFGEGI--HPDVEKAVWDAIHKCE 277
Query: 285 GFHKTNGEL---------------------KNVMRLI-QRYEFKNNHNEWIESVKPALDP 322
T E+ N+ R RY F+ W V
Sbjct: 278 SLEATWEEVSMPHIKYALASYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAE 337
Query: 323 DISAEIGEMLEISETVIENCKSIRNEMRS-AISSLLKDD--------GILVTPTTAYPPP 373
E+ + + + + +++ + +L+K D +L+ PT P
Sbjct: 338 GFGTEVKRRILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKVDLLMAPTMPNPAF 397
Query: 374 KLGGKEMLSEDYQNRAFSLLSIASV--SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
K+G K ED S ++ + +G ++VP G+ D P + + G F
Sbjct: 398 KIGEK---IEDPLTLYLSDINTCPINLAGVPSISVPCGFTDGLPIGLQIM----GKPFDE 450
Query: 432 DTVQNMYASLQEQADIATK 450
+TV + ++ D TK
Sbjct: 451 ETVLRAAYTFEKNTDYHTK 469
>gi|148359281|ref|YP_001250488.1| glutamyl/tRNA (Gln) amidotransferase subunit A [Legionella
pneumophila str. Corby]
gi|296107326|ref|YP_003619026.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila 2300/99 Alcoy]
gi|166217678|sp|A5ICP2.1|GATA_LEGPC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|148281054|gb|ABQ55142.1| glutamyl/tRNA (Gln) amidotransferase, A subunit [Legionella
pneumophila str. Corby]
gi|295649227|gb|ADG25074.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila 2300/99 Alcoy]
gi|307610433|emb|CBX00003.1| glutamyl-tRNA(Gln) amidotransferase [Legionella pneumophila 130b]
Length = 483
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++PGGSS G+A AVA +LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGE---YFD 277
D +K P D++ +Q I KLF ENLG D
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLF-------ENLGAEIIEID 294
Query: 278 SKVPSL---------KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
K+ L +N + +R R + + IE + + E+
Sbjct: 295 LKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + + L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSTGFFNAYYLHAQKVRRLIRDELITTLNSVDVIIGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++ QN + ++A+ ++G +++P G+ +K P + + +H + LL
Sbjct: 410 KINDPIQNYLADVFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>gi|428317767|ref|YP_007115649.1| amidohydrolase, AtzE family [Oscillatoria nigro-viridis PCC 7112]
gi|428241447|gb|AFZ07233.1| amidohydrolase, AtzE family [Oscillatoria nigro-viridis PCC 7112]
Length = 487
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 155/349 (44%), Gaps = 29/349 (8%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ FAV +LFDI G T G + + A+R + VV+ L + GA +G +D
Sbjct: 75 PGPLAGVPFAVKNLFDIGGITTLAGS-KINADNPPATRDAAVVARLKQAGAVLVGTLNMD 133
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP +++ GGSS G+A AVAA V F+LG DT G +RVP+A
Sbjct: 134 EYAYGFVTENSHYGPTRNPRDTARIAGGSSGGSAAAVAAGFVPFTLGSDTNGSIRVPAAL 193
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSP 230
CG+ GF+P+YG +S G S SLD VG F R + + + +L + P +R P
Sbjct: 194 CGVFGFKPTYGRLSRAGAYLFSGSLDCVGPFGRSIRDMALLYDILQCPDSRDPVCTRRPP 253
Query: 231 R-------------QIIIADDCFELLKIP-ADRVVQVVIKSTEKLFGRQVLKHENLGEYF 276
+I +AD F P A V++V K+ + + +
Sbjct: 254 ELCSPQLNQGLEGLRIAVADGYFATGAEPEALDAVEIVAKALTNVLDCGIDTEKT----- 308
Query: 277 DSKVPSLKGFHKTNGELKNVMR----LIQRYEFKNNHNEWIESVKPALDPDISAEIGEML 332
+ P + G + R +I E N H + + S DP
Sbjct: 309 -TNPPKIGGLATVTIPESDRARAAAFIITACEGGNLHLDSLRSRPQDFDPATRDRFLAGT 367
Query: 333 EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
I T + R R + + + I++ P T P++G ++M+
Sbjct: 368 LIPATWYLQAQRFRQWYRDRMREIFQQTDIILAPATPIAAPEIGVEKMV 416
>gi|410461848|ref|ZP_11315485.1| glutamyl-tRNA(gln) amidotransferase subunit a [Bacillus
azotoformans LMG 9581]
gi|409925106|gb|EKN62335.1| glutamyl-tRNA(gln) amidotransferase subunit a [Bacillus
azotoformans LMG 9581]
Length = 469
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGH---PEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL G+ AV D+ G T G W A + V L E GA IGK +
Sbjct: 71 PLHGIPIAVKDILQTAGVKTTGGSKIFEGWVPDEDAVA-----VQKLREAGAIIIGKANL 125
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
EFA N HY + NP ++PGGSS G+AVA A + ++G DT G +R+P+A
Sbjct: 126 HEFAMGATTENPHYGSTKNPWNEKRIPGGSSGGSAVATATGMAFGAVGTDTAGSIRLPAA 185
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG +GF+P+YG VS G +P S SLD VG R
Sbjct: 186 MCGTVGFKPTYGVVSRRGCLPFSWSLDHVGPMTR 219
>gi|257457941|ref|ZP_05623100.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema vincentii
ATCC 35580]
gi|257444654|gb|EEV19738.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema vincentii
ATCC 35580]
Length = 486
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 57 PLTGLSFAVSDLFDIEG--------YVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
PL GL FAV D I G + G+ P A TV++ L+E GA I
Sbjct: 74 PLLGLPFAVKDNISIRGKLCTCCSKILEGYKAPYNA----------TVITRLIEAGAIPI 123
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
G+ +DEFA + Y NP S PGGSS G+A VA F+LG +T G V
Sbjct: 124 GRANMDEFAMGSSTEYSVYGPSRNPVDRSLTPGGSSGGSAAVVAGFQAPFALGTETGGSV 183
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
R+P+++CGI G +P+YGA+S G++ +SLD VG FAR
Sbjct: 184 RLPASYCGIYGLKPTYGAISRYGVVAFGSSLDQVGLFAR 222
>gi|421480264|ref|ZP_15927902.1| amidase [Burkholderia multivorans CF2]
gi|400221458|gb|EJO51914.1| amidase [Burkholderia multivorans CF2]
Length = 449
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 172/396 (43%), Gaps = 41/396 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ F V FD+ GY T G P R AA + +V LV+ GA + T +DEFA
Sbjct: 74 LAGVPFVVKSNFDVAGYATVAGSPTRLRA-PAARCDAAMVDRLVQAGAVPVAATHMDEFA 132
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
G N H+ PA PS+M GGSSSG+A AVAA V +LG DT G +R P+A CG+
Sbjct: 133 CGATGVNPHFGAVRLPADPSRMTGGSSSGSAAAVAAGHVPLALGSDTNGSIRAPAALCGV 192
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL---LQLPFAAQRSPRQII 234
+P++G +S G +P + SLD G FA + L + L + A P ++
Sbjct: 193 WAIKPTHGRLSMDGCVPYAPSLDVAGGFAANLDDLCALYDALSGTRRDGSPAGHVPLRVG 252
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGFHKTNGEL 293
+ FE AD V+ ++ F +H+++ E D V +
Sbjct: 253 VLTGEFERR---ADAQVRRAVERASACFA----QHDHVQAEPIDESVLE---------PI 296
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
+ RL+ +E H +++ + + I L I + + + R E ++ +
Sbjct: 297 RASARLVSNFEVARRHRALLDADASHVSAHLRERIRTGLAIDDAAYVDALAHRAEWQARL 356
Query: 354 SSLLKDDGILVTPTTAYPPPK------------LGGKEMLSEDYQNRAFSLLSIASVSGC 401
++L + IL+ P T Y P+ L K L Q +F+ L +
Sbjct: 357 AALFERFDILIAPATPYVAPRFCDATVDVNGEALDPKTTLGMFTQPISFAGLPV------ 410
Query: 402 CQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
V+ P + P V I R G +R LD + +
Sbjct: 411 --VSAPCHAKGELPAGVQLIGRPGDERRCLDAARRL 444
>gi|291549446|emb|CBL25708.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Ruminococcus torques L2-14]
Length = 496
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D IEG +T ++ + T+ V L + GA IGKT +DEF
Sbjct: 70 PLAGVPVAVKDNMCIEGQLTTCSSKIL--SNFKPTYTAEAVENLRKAGAVIIGKTNMDEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A +Y NP + +PGGSS G+ AVAA ++LG DT G +R PS+FCG
Sbjct: 128 AMGSTTETSYYGPTRNPHNTAHVPGGSSGGSCAAVAASECYYALGSDTGGSIRQPSSFCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
++G +P+YG VS G+I +SLD +G A+D
Sbjct: 188 VVGLKPTYGTVSRYGLIAYGSSLDQIGPVAKD 219
>gi|320450505|ref|YP_004202601.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermus scotoductus
SA-01]
gi|320150674|gb|ADW22052.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Thermus scotoductus
SA-01]
Length = 471
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 88/160 (55%), Gaps = 20/160 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR---------TSTVVSTLVEGGATC 107
PL GL AV D +G T +A SR +T V+ L GA
Sbjct: 57 PLAGLVVAVKDNIVTKGIPT-----------TAGSRLLEGFLPPYEATAVARLKALGALV 105
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
IGKT +DEF + + + NP P+++PGGSS G+AVAVAADL +LG DT G
Sbjct: 106 IGKTNLDEFGMGSSTEHSAFFPSRNPFDPTRVPGGSSGGSAVAVAADLAPLALGSDTGGS 165
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
VR P+AFCGI G +P+YG VS G+I ++SLD +G AR
Sbjct: 166 VRQPAAFCGIYGLKPTYGRVSRYGLIAYASSLDQIGPMAR 205
>gi|399010436|ref|ZP_10712809.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM17]
gi|398107159|gb|EJL97166.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM17]
Length = 386
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 171/400 (42%), Gaps = 59/400 (14%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHS-----AASRTSTVVSTLVEGGATCIGKTVVD 114
GLS V D DI GY P A +++ AA + VV L+ G GKT +
Sbjct: 30 GLSVMVKDTIDIAGY------PTRASSNALVDAPAAGEHAQVVRALLGAGCRITGKTSLH 83
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A+ G N T NP P +PGGSSSG+A AVA L DF+LG DT G VR+P+A
Sbjct: 84 ELAFGTTGLNAWTGTAANPRYPGYIPGGSSSGSAAAVAGGLCDFALGTDTGGSVRIPAAC 143
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD-PKILRHVGHVLLQLPFAAQRSPRQI 233
CG+ G +P++G +S G++P ++LD VG ARD +++ +G
Sbjct: 144 CGVFGLKPTFGRISRQGVMPTHSTLDCVGPLARDMDRLIEAMG----------------- 186
Query: 234 IIADDCFELLKIPADRVVQVV-IKSTEKLFGRQVLKHENLGE-YFDSKVPSLKGFHKTNG 291
I D F + +P + VV ++ E++ Q + ++ LG +F +L G G
Sbjct: 187 -IIDPTFAPVPLPEHLAIGVVAVEVHEQI---QAVVNQALGRSHFKLLEQTLPGMSAAYG 242
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV----IENCKSIRN 347
++ N W + +++ + L + +E + R
Sbjct: 243 AGMAII----------NAETWAACGHLLQTGRVGSDVADRLRAASLTTAKFVEEAEITRR 292
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKL----GGKEMLSEDYQNRAFSLLSIASVSGCCQ 403
+ + + L IL PT P ++ + L RAF+L SG
Sbjct: 293 AFTAEVDAALAITPILAMPTMPDFPLRVVDAADTRAALGMTSLVRAFNL------SGHPA 346
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
+++PL P + IA HG D L + + L+E
Sbjct: 347 LSIPLESASGLPIGLQLIAAHGADELLCAVARELVRRLEE 386
>gi|451999091|gb|EMD91554.1| hypothetical protein COCHEDRAFT_1101831 [Cochliobolus
heterostrophus C5]
Length = 641
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 188/420 (44%), Gaps = 50/420 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ + D+FD+ G TG G+ W + A+ T+ VV L++ GA +GK +F
Sbjct: 210 PLAGMRVGIKDIFDVTGLKTGNGNRAWYNLYPPANATAPVVKRLLDAGAIIVGKQKTAQF 269
Query: 117 AYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVPS 172
A T+ Y +P NP Q P SS+GA +VA+ D +DF+LG DT G +R P+
Sbjct: 270 ANGEYSTSDWVDYHSPFNPRGDGYQDPSFSSAGAGASVASYDWLDFALGSDTGGSIRGPA 329
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS--P 230
G+ G RPS+GA +P++ LDT G ARDP +L++ + LP + + P
Sbjct: 330 RSNGLYGLRPSHGAAPLQLALPLAPELDTAGLIARDPLLLQYASTEIYGLPRNSFQGFLP 389
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP--------S 282
Q+++ EL A ++ + + + G + N+ + P S
Sbjct: 390 TQLLVESFPAELSNKIA-TIIDRFLDEMKNVLGIEKTDWFNVTTAWQQSRPQSAPVDIQS 448
Query: 283 LKG--FHKTNGELKN-VMRLIQRYEFKNNHNEWIESVKPAL-------DPDISAEIGEML 332
L G + G+ + ++R ++ + H+ + +V P D S + + L
Sbjct: 449 LLGNVYATIIGQRQTELVRDPFYVKYASTHDGRLPAVNPVPLARWAFGDAQPSTALADAL 508
Query: 333 EISETVIENCKS--IRNEMRSAISSLLK--DDGILVTPTTAYPPPKLGGKEMLSEDYQNR 388
++ ++ ++ + RS S++L I+ +T PPK + N+
Sbjct: 509 TNKTVFMDWFQNHVLKQDRRSCTSAVLAYISAPIIQYRSTYRSPPK------APSGFTNQ 562
Query: 389 AFSLLSIASVSGCCQVTVPLG----------YYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
FS++ + +T+P+G + + P S++ + G D LL+ V +Y
Sbjct: 563 YFSVM-----AEVPDITIPIGEMSYHSTTTNHTEPLPVSINLMVAKGCDATLLNLVTKLY 617
>gi|397667463|ref|YP_006509000.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila subsp. pneumophila]
gi|395130874|emb|CCD09123.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila subsp. pneumophila]
Length = 483
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++PGGSS G+A AVA +LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGE---YFD 277
D +K P D++ +Q I KLF ENLG D
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLF-------ENLGAEIIEID 294
Query: 278 SKVPSL---------KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
K+ L +N + +R R + + IE + + E+
Sbjct: 295 LKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + + L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++ QN + ++A+ ++G +++P G+ +K P + + +H + LL
Sbjct: 410 KINDPIQNYLADVFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>gi|198283059|ref|YP_002219380.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666192|ref|YP_002425270.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247580|gb|ACH83173.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518405|gb|ACK78991.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 465
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 152/336 (45%), Gaps = 24/336 (7%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ FAV +LFD++G +T G + R + A +T V L GA +G +
Sbjct: 71 PGPLAGVPFAVKNLFDLQGEITLAGS-KINRKDALAVADATAVRRLTAAGAVLVGALNMG 129
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY G N HY NP +M GGSS G+ AVAA +V +LG DT G +RVPS+
Sbjct: 130 EYAYDFTGENIHYGPSRNPHDRLRMTGGSSGGSGAAVAAGMVPIALGSDTNGSIRVPSSL 189
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL-----PFAAQRS 229
CGI G +P+YG +S G P SLD VG AR L + + +Q P A R+
Sbjct: 190 CGIFGLKPTYGRLSRAGAFPFCPSLDHVGPLARSVADL-ALAYDAMQGADAADPVCADRA 248
Query: 230 --PRQIIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
P +AD L + I A +Q + E+ R V N+ + + +P
Sbjct: 249 TEPVSGSLADGVAGLKIAIAAGYFMQQATSAAEQALAR-VAAALNVTDLVE--IPG---- 301
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKS 344
+ + LI E N H + + DPD+ + G +L S + +
Sbjct: 302 ---TAQARAAAYLITNAESSNLHLDRLRHHAADYDPDVRDRMLAGTLLPASWNI--QAQR 356
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
R R+ + + +L+ P T P +G + M
Sbjct: 357 FRRWYRAEVLKVFARYDLLLAPATPMSAPAIGQRYM 392
>gi|29833239|ref|NP_827873.1| allophanate hydrolase [Streptomyces avermitilis MA-4680]
gi|29610361|dbj|BAC74408.1| putative amidase family protein [Streptomyces avermitilis MA-4680]
Length = 550
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G FAV D+ G T G P +A A + V+ L GA +G T +D+F
Sbjct: 50 PLAGRLFAVKGNIDVHGLATTAGCPAYAYLPEA---DAPAVARLRAAGAIVLGTTNLDQF 106
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + GT Y P+++ GGSS+G+AVAVA +VDF+LG DT G RVP+AF G
Sbjct: 107 ATGLVGTRSPYGAVRGAYDPARISGGSSAGSAVAVALGIVDFALGTDTAGSGRVPAAFNG 166
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARD-PKILRHVGHVL----LQLPFAAQRSP 230
I+G +P+ G V G +P SLD V FAR P+ + + H+ LP QR+P
Sbjct: 167 IVGLKPTRGLVPTTGTVPACASLDCVTVFARTLPEAEQALAHLASPPGRDLPPLPQRAP 225
>gi|296109416|ref|YP_003616365.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [methanocaldococcus
infernus ME]
gi|295434230|gb|ADG13401.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus
infernus ME]
Length = 433
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 200/428 (46%), Gaps = 36/428 (8%)
Query: 24 KKLKKNIKQDFGAFIE--KLQLLPPPQPLPPKAP---HPLTGLSFAVSDLFDIEGYVTGF 78
++++KN +D AFIE K ++L + L PL G AV ++EGY
Sbjct: 11 ERIEKN--KDLNAFIEVQKERVLKEAERLEKDEEAKKKPLYGKIVAVKANINVEGYTISC 68
Query: 79 GHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQ 138
+ A +TV+ L++ GA IG T +DEFA +G +Y NP A +
Sbjct: 69 ASKTLE--NYVAPYNATVIEKLLDAGALIIGITNMDEFACGSSGETSYYGPTKNPVAKDR 126
Query: 139 MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTS 198
+PGGSSSG+A AV+A+L D +LG DT G +R PS+ CG+ GF+PSYG VS G+ ++ S
Sbjct: 127 IPGGSSSGSAAAVSAELCDIALGSDTGGSIRNPSSHCGVSGFKPSYGVVSRHGLCDLAMS 186
Query: 199 LDTVGWFARDPKILRHVGHVL----------LQLPFAAQRSPRQIIIADDCFELLKIPAD 248
D +G A+ + L V +++ ++ P + + + E ++ +
Sbjct: 187 FDQIGPIAKRAEDLLLVMNIIKGKDVRDTTTVETPEFKKLDVSKFKVG-VVEEFMEAADE 245
Query: 249 RVVQVVIKSTE--KLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFK 306
++ + + K E K G +++ H N +Y D +P+ ++ N +RY+ +
Sbjct: 246 KIRKEIEKGIEVFKDMGCEIV-HLNY-KYLDLALPT---YYLIN--YVEFFSATRRYDGR 298
Query: 307 NNHNEWIESVKPALDPDISAEIGEML---EISETVIENCKSIRNEMRSAISSLLKDDGIL 363
E + I+ IG M+ E S + RN +R + L+KD I+
Sbjct: 299 RYGYRIEEVCGEEVLRRIT--IGSMISQKEYSGKYYKKALKARNLLRKEMIKLMKDIDII 356
Query: 364 VTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIAR 423
V+PT P KLG K + Y ++L A++ G TVP + P + +A+
Sbjct: 357 VSPTVPKLPHKLGEKLSPMDMYNYDVLTVL--ANICGVPAGTVPCSAINGIPIGLQIMAK 414
Query: 424 HGGDRFLL 431
D +L
Sbjct: 415 PFEDEKVL 422
>gi|325261862|ref|ZP_08128600.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium sp. D5]
gi|324033316|gb|EGB94593.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium sp. D5]
Length = 491
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR---------TSTVVSTLVEGGATC 107
PL G+ AV D IEG +T + +SR T+ V L + GA
Sbjct: 70 PLAGVPVAVKDNLCIEGQLT-----------TCSSRILSDFKPVYTAEAVMNLQKAGAVI 118
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
IGKT +DEFA Y NP P+ +PGGSS G+ AVAA ++LG DT G
Sbjct: 119 IGKTNMDEFAMGSTTETSFYGPTKNPHNPAHVPGGSSGGSCAAVAAQECWYALGSDTGGS 178
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+R PS+FCG++G +P+YG VS G+I +SLD +G A+D
Sbjct: 179 IRQPSSFCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPVAKD 219
>gi|398867113|ref|ZP_10622582.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
gi|398237968|gb|EJN23706.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
Length = 372
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G A+ D DI GY T G +A AA++ + VV ++ G +GKT + E A+
Sbjct: 14 GKRVAIKDSIDIAGYPTRSGSRAFADA-PAATKNAEVVDAILNAGWQIVGKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N TP NP AP ++PGGSSSG+A AVAA L D +LG DT G VRVP+A CGI G
Sbjct: 73 VTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIALGTDTGGSVRVPAACCGIAG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+P+YG VS +G P+ +SLD VG FAR
Sbjct: 133 LKPTYGRVSRIGAHPLESSLDCVGPFAR 160
>gi|298293725|ref|YP_003695664.1| allophanate hydrolase [Starkeya novella DSM 506]
gi|296930236|gb|ADH91045.1| allophanate hydrolase [Starkeya novella DSM 506]
Length = 602
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL G+ +AV D D+ T P++ A + + + GA C+GKT +D+
Sbjct: 72 RPLWGIPYAVKDNIDVARMPTTAACPDFTYVAEADAAVVARLRAM---GAICLGKTNLDQ 128
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + G Y P N P +PGGSSSG+AVAVA L F+LG DT G RVP+A
Sbjct: 129 FATGLVGVRTPYPVPRNAVDPKLVPGGSSSGSAVAVARRLAVFALGTDTAGSGRVPAALN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS GA+S +G++P SLDTV FA
Sbjct: 189 DIVGLKPSLGALSSIGMVPACRSLDTVSIFA 219
>gi|347761916|ref|YP_004869477.1| amidase [Gluconacetobacter xylinus NBRC 3288]
gi|347580886|dbj|BAK85107.1| amidase [Gluconacetobacter xylinus NBRC 3288]
Length = 456
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 172/399 (43%), Gaps = 58/399 (14%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+ P PL G+ F V DLFD+ G VT G R + A++ +TVV+ L GA +
Sbjct: 69 RDPGPLAGVPFGVKDLFDVCGEVTTAGSIVL-RDNLPATQDATVVARLRAAGAVPVATLN 127
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DEFAY + N H T NP P+++ GGSS G+A +VAA ++ F+LG DT G +RVPS
Sbjct: 128 MDEFAYGFSTENAHTGTTRNPHDPTRLVGGSSGGSAASVAAGMLPFTLGSDTNGSIRVPS 187
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A CG+ G +P+YG + G+ P SLD VG A + L+ V ++ A RS
Sbjct: 188 ALCGVWGIKPTYGQMPLQGVYPFVASLDVVGPMAVTVQDLQAVYTIM------AGRS--- 238
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPS-----LKGF- 286
L +PA V+V LG +F + + L G
Sbjct: 239 ----------LTLPAVGDVRV----------------ARLGGWFAHNISAEMAAGLDGVM 272
Query: 287 -HKTNG---ELKNVMR------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISE 336
H +G EL V R LI E N H + DP + + +
Sbjct: 273 AHLGSGRVIELPEVARARASAFLISAAEGGNLHLPRLRLRSMQYDPATRSRLMAGAILPA 332
Query: 337 TVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI- 395
+ R R+ + L +L+ PTT P++ ++ + A + L I
Sbjct: 333 ATFVQAQRFRRWFRAQVHEALAQADVLIAPTTVGIAPRIDQPTIMLDGKSVSARANLGIF 392
Query: 396 ---ASVSGCCQVTVPLGYYDKCPTSVSFIARHGG-DRFL 430
S++G + VPL D P + + GG DR
Sbjct: 393 TQPISLTGLPVLAVPLA-VDGMPLGIQLVGAPGGEDRLF 430
>gi|304321845|ref|YP_003855488.1| amidase [Parvularcula bermudensis HTCC2503]
gi|303300747|gb|ADM10346.1| amidase [Parvularcula bermudensis HTCC2503]
Length = 517
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ +AV DLF + G T G + T + + L + GA IG T++D
Sbjct: 131 PGPLAGVPYAVKDLFGVAGEPTTAGA-QSRETAPPEADDCEAIRRLGDAGAILIGSTMMD 189
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY T NP A ++ GGSS G+A AVAA LV F+LG DT G VRVP++
Sbjct: 190 EYAYGFVTVNSHYGTTKNPHALDRLAGGSSGGSAAAVAAGLVPFALGSDTNGSVRVPASL 249
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPF 224
CG+ G RPS+G + G+ P SLDTVG FAR L V VL F
Sbjct: 250 CGVFGLRPSHGDIPTEGVFPFVPSLDTVGAFARSAADLALVHAVLRDRAF 299
>gi|407802883|ref|ZP_11149722.1| allophanate hydrolase [Alcanivorax sp. W11-5]
gi|407023043|gb|EKE34791.1| allophanate hydrolase [Alcanivorax sp. W11-5]
Length = 592
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 93/163 (57%), Gaps = 3/163 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FA+ D D+ G T G +A T ++TVV+ L++ GA +GKT +D+F
Sbjct: 64 PLYGVPFAIKDNIDLAGVPTTAGCEAFASTPGT---SATVVARLIQAGAVPLGKTTLDQF 120
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + GT + N P+ + GGSS+G+AVAVA V FSLG DT G RVP+AF
Sbjct: 121 ATGLVGTRSPWGACRNAFDPAYISGGSSAGSAVAVALGEVTFSLGTDTAGSGRVPAAFNN 180
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
++G +P+ G S GI+P SLD FA +P R + VL
Sbjct: 181 LIGVKPTRGRWSTHGIVPACRSLDCPSLFALNPDDARCIMAVL 223
>gi|421855698|ref|ZP_16288074.1| putative amidase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|403188923|dbj|GAB74275.1| putative amidase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 370
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 165/376 (43%), Gaps = 38/376 (10%)
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L V D DI G T G A + + VV +++ KT + E A+ I
Sbjct: 15 LKVMVKDSIDIRGLRTMAGSKALMEVEPALAN-AEVVDLILKADCVITAKTNLHELAFGI 73
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
G N + TP NP P +PGGSSSG+A AVAA L DFSLG DT G +R+P+A CG+ GF
Sbjct: 74 TGINPVFGTPVNPKYPDLIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAACCGVFGF 133
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+PS+G VS G+ P+ +SLD VG FA +++ ++ ++++ Q +A
Sbjct: 134 KPSFGRVSRKGVYPVQSSLDCVGPFASSVEMIITAMQIIDPTFKSSEKIQHQPKLA---- 189
Query: 241 ELLKIPADRVVQVVIKS--TEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMR 298
+L + AD V +K T+ + ++ E F + M+
Sbjct: 190 -VLNVEADSAVWDCVKDYLTQTNLKVEPVQVTTFSEAFQAG-----------------MQ 231
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLK 358
+I YE + ES K + PD+ + + + + + ++ I LL+
Sbjct: 232 II-NYENWQAYGTLTESGK--ISPDVQQRLLNAAKTTLEQVRQAEDVKARFTQEIDELLE 288
Query: 359 DDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKC 414
+L+ PT PP++ E L+ R F+L SG + +PL
Sbjct: 289 QYDVLILPTLPQIPPRVAEAENTVAFLNLTALVRPFNL------SGHPALNIPLQTMTGM 342
Query: 415 PTSVSFIARHGGDRFL 430
P + + R D L
Sbjct: 343 PVGLQLVGRKNADEQL 358
>gi|254560151|ref|YP_003067246.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
gi|254267429|emb|CAX23268.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
Length = 616
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T P++A S T+ V+ L+ GA IGKT +D+F
Sbjct: 65 PLWGVPFAVKDNLDVVGLPTTAACPDFAFV---PSETAPCVARLLAAGAILIGKTNLDQF 121
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G + P N +PGGSSSG+AVAVA LV F+LG DT G RVP+
Sbjct: 122 ATGLVGLRTPHPAPRNALNADLVPGGSSSGSAVAVAHGLVAFALGTDTAGSGRVPAGLNN 181
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +PS G+VS G++P +LDTV FA
Sbjct: 182 VVGLKPSLGSVSSRGLLPACRTLDTVSVFA 211
>gi|39934538|ref|NP_946814.1| allophanate hydrolase [Rhodopseudomonas palustris CGA009]
gi|39648387|emb|CAE26908.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Rhodopseudomonas palustris CGA009]
Length = 601
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D+ G T P +A + R +T V+ L GA IGKT +D+F
Sbjct: 65 PLYGVPVAVKDNIDVAGLPTTAACPAFAYQPA---RDATAVAKLRAAGAIVIGKTNLDQF 121
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N +PGGSSSG+AVAV A LV SLG DT G RVP+
Sbjct: 122 ATGLVGVRSPYGVPRNAMRSDLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLNN 181
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G +S G++P +LD V FA
Sbjct: 182 IVGLKPSLGMISTTGVVPACRTLDCVSIFA 211
>gi|156057793|ref|XP_001594820.1| hypothetical protein SS1G_04628 [Sclerotinia sclerotiorum 1980]
gi|154702413|gb|EDO02152.1| hypothetical protein SS1G_04628 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 533
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 193/416 (46%), Gaps = 35/416 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F+V D FDI G T G P A T ++ ++ V ++ GA IGKT +++
Sbjct: 113 PLWGVPFSVKDNFDIAGIPTTIGCPALAYTPTS---SALVYQRCIDAGALFIGKTNMEQL 169
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y + +PS++ GGSSSG+AV+V+ LV FSLG DT G +RVP+ F G
Sbjct: 170 AIGMTGCRSPYGILHSTFSPSRIVGGSSSGSAVSVSEGLVSFSLGSDTAGSIRVPAHFNG 229
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTV---GWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
++GF+P+ G VS G+ P D V G +D + + + + + A+ P +
Sbjct: 230 LVGFKPTKGTVSAHGVAPACLHQDCVSFLGLTTQDTETVWKICQGFDKNDYFAKSPPFNV 289
Query: 234 ---IIADDCFELLKI--PADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGFH 287
+++ D + P D ++V I + F R V E+L G+ D F
Sbjct: 290 SSQVLSTDAKPAFRFGTPPDSALKVCIPIYREQFNRVVTTLESLGGQRVDL---DWTPFA 346
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
N L + +++R W E K L P I + L S T I+ K +
Sbjct: 347 SANELLYDGTFVLER--LTTLPEGWFEKNKKLLHPVICSVFEGALARSTTAIDVFKDLHK 404
Query: 348 --EMRSAISSLLKDDG------ILVTPTTAYPPP-KLGGKEMLSEDYQNRAFSLLSIASV 398
E + + ++L D ++V PTT + P K+ + + Q AF+ A+V
Sbjct: 405 QAEYKRMVENILTLDDDSSELTVMVVPTTPFHPTIDEVAKDPIGINGQLGAFA--HFANV 462
Query: 399 SGCCQVTVPLGYY-------DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADI 447
V VP G Y + P SV+ +A G DR LL V+ + +L++ ++
Sbjct: 463 LDLVAVAVPCGTYKYGIDKIESLPFSVTILAGTGLDRQLLHLVKWLEDALRDIEEV 518
>gi|358635180|dbj|BAL22477.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Azoarcus sp. KH32C]
Length = 488
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A D+F EG +T G ++ + + VVS L GA +GKT +DEF
Sbjct: 67 PLTGIPLAHKDVFCTEGLLTTCGSKML--SNFVSPYDAHVVSLLKTAGAVTLGKTNMDEF 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N HY NP +++PGGSS G+AVAVAA L + G DT G VR P+A G
Sbjct: 125 AMGSSNENSHYGPVKNPWDTTRIPGGSSGGSAVAVAARLAPIATGTDTGGSVRQPAAHTG 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWF 205
+ G +P+YG VS G+I ++SLD G F
Sbjct: 185 VTGIKPTYGIVSRYGMIAYASSLDQGGAF 213
>gi|326470556|gb|EGD94565.1| glutamyl-tRNA(Gln) amidotransferase [Trichophyton tonsurans CBS
112818]
Length = 627
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ V D+F+++G T G+ W + + AA+RT+ V L++ GA +GK
Sbjct: 202 AQKPLAGVRLGVKDIFNVKGLKTSNGNRAWYQLYPAANRTAIAVQNLIDAGAVVVGKMKT 261
Query: 114 DEFAYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVR 169
+FA T Y P NP Q PG SS+G A AA +D +LG DT G +R
Sbjct: 262 SQFANGETATADWVDYHAPFNPRGDGYQDPGSSSAGCAAGEAAYPWLDIALGSDTGGSIR 321
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
PS G+ G RPS+G VS G +P++ DT G ARDPK+
Sbjct: 322 SPSQLQGLFGNRPSHGLVSLEGAMPLAPQFDTAGLIARDPKL 363
>gi|116696062|ref|YP_841638.1| amidase [Ralstonia eutropha H16]
gi|113530561|emb|CAJ96908.1| Amidase [Ralstonia eutropha H16]
Length = 451
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V L D+ G+ T G A+ A R + V LV GA + +DE+
Sbjct: 69 PLAGVPFVVKSLLDVRGHATLAGAAPRAQ-EPPALRHADTVEALVAAGAVPVALAAMDEY 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A G N NP PS++ GGSS+G A VAA +V F LG DT G +R P+AFCG
Sbjct: 128 ACGATGENVIGGPVRNPLDPSRITGGSSAGTAALVAAGVVPFGLGSDTNGSIRAPAAFCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I G RP+ G +S G +P + SLDTVG A
Sbjct: 188 IWGLRPTTGRLSLAGCVPYAQSLDTVGPMA 217
>gi|386014791|ref|YP_005933068.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Pantoea ananatis
AJ13355]
gi|327392850|dbj|BAK10272.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatA [Pantoea
ananatis AJ13355]
Length = 465
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +AV +LFD++GY T G E R AA+R + ++ L + GA G +D +
Sbjct: 70 PLAGIPYAVKNLFDVQGYSTLAGA-ELFRQRPAANRDAFAITQLQQAGALLSGMVNMDAY 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP +++ GGSS G+A AVAA LV FSLG DT G +RVP++ CG
Sbjct: 129 AYGFTTENSHYGATRNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
I G +P++G +S G P SLD +G FAR L V +L
Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVDDLAQVYDLL 231
>gi|350570293|ref|ZP_08938659.1| amidase [Neisseria wadsworthii 9715]
gi|349797188|gb|EGZ50957.1| amidase [Neisseria wadsworthii 9715]
Length = 455
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G++ + DLFD G +T G A AA + + VVS L GA IG+T + EFA
Sbjct: 70 LDGIAVSWKDLFDQAGEITRAGSLTTADNPPAA-QDAAVVSLLESVGAVSIGRTNLTEFA 128
Query: 118 YSINGTNKHYDTPTN--PAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
S G N H+ TP N PAA PGGSS GAAV+VAA +V +++G DT G VR+P+A
Sbjct: 129 LSGLGLNPHFGTPANVWPAAEPLAPGGSSCGAAVSVAAGIVPYAVGTDTSGSVRIPAALN 188
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
G+ GF+P+ + +G+ +S +LD++G A
Sbjct: 189 GLAGFKPTSARLPRIGVWTLSPTLDSIGPLA 219
>gi|302881703|ref|XP_003039762.1| hypothetical protein NECHADRAFT_50177 [Nectria haematococca mpVI
77-13-4]
gi|256720629|gb|EEU34049.1| hypothetical protein NECHADRAFT_50177 [Nectria haematococca mpVI
77-13-4]
Length = 627
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 180/420 (42%), Gaps = 54/420 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ + D+F+++G T G+ W + AA+RT+ V L++ GA +GK +F
Sbjct: 202 PLAGVRLGIKDIFNVQGLKTSNGNRAWYNLYPAANRTAPAVQNLLDAGAVIVGKMKTSQF 261
Query: 117 AYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVRVPS 172
A + T Y P NP Q P SS+G A VAA +D +LG DT G +R PS
Sbjct: 262 ANGESATADWVDYHAPFNPRGDGYQDPSSSSAGPAAGVAAYPWLDIALGSDTGGSIRSPS 321
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-PR 231
GI G RPS+G VS +P+S DT G F+RDP + + L + S P
Sbjct: 322 QVQGIYGNRPSHGLVSLGDTMPLSPHFDTAGLFSRDPALWKTAAQALYGTNISLNDSYPS 381
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKL-----FGRQVLKHENLGEYFDS---KVPSL 283
I+ + P ++ I T+ L F NL E ++S PS+
Sbjct: 382 NILT-------IGFPTQAESELNIILTQFLANLTDFLSAKATPFNLEERWNSTNPSAPSV 434
Query: 284 KGFHKTNGEL---KNVMRLIQRYEFKNNHNEWIESVKPALDP----------DISAEIGE 330
E+ K RL+ R F ++ + +P ++P + +A + +
Sbjct: 435 STLLNNTYEIVSAKEQARLV-RDPFFRDYGAAHDGRRPHVNPAPLNRWAFGDNSTATVEQ 493
Query: 331 MLEISETVIE--NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNR 388
+ +E N + + ++ +S +LL + TP Y G ++ +
Sbjct: 494 GIANKTQFMEWFNTRILSHDAKSCSHNLLVY--VPRTPVPVYRDTYRTGPQV------PK 545
Query: 389 AFSLLSIASVSGCCQVTVPLG----------YYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
AFS I+ +S + VP+G + + P +V +A G D L VQ++Y
Sbjct: 546 AFSTSRISVMSETPDMVVPIGQVAYHSSITSHTEYLPVTVDMMAAKGCDGMLFSLVQHLY 605
>gi|403052113|ref|ZP_10906597.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter bereziniae LMG 1003]
Length = 370
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 171/380 (45%), Gaps = 44/380 (11%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
L V D DI+G T G T AA++ + VV ++ KT + E A+
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGSQALMNT-PAATQNAEVVDRILAADCQITAKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
I G N H+ T NP P +PGGSSSG+A AVAA L DF+LG DT G +R+P+A CG+ G
Sbjct: 73 ITGINHHFGTAINPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
+P++ VS G+ P +SLD VG FA ++ ++ P +
Sbjct: 133 LKPTFDRVSRQGVHPAVSSLDCVGPFAMSVNMIETAMQII-----DPSFHPLTDLAQAPK 187
Query: 240 FELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGFHKTNGELKNVMR 298
L + AD VVI+S + + L + ++FD P+ + M+
Sbjct: 188 LAWLDVSADA---VVIESIQNYLAKANLTLTKVKSKWFD---PAFEAG----------MQ 231
Query: 299 LIQRYEFKNNHNEWIESVKPALDPDISAEI-GEMLEISETV---IENCKSIRNEMRSAIS 354
+I N+ W + A++ G +L+ ++T ++ + I+ ++ I
Sbjct: 232 II-------NYENWQAYAALTETGLVGADVNGRLLKAAQTTMDQVQQAEQIKANFKAEID 284
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF----SLLSIASVSGCCQVTVPLGY 410
+LL L+ PT PPK +SE AF SL+ ++SG +++PL
Sbjct: 285 ALLAQFDALILPTLPQIPPK------VSEAENTVAFLNLTSLVRPFNLSGHPAISIPLET 338
Query: 411 YDKCPTSVSFIARHGGDRFL 430
P + +A+ D +L
Sbjct: 339 ASGLPIGLQIVAKQNADEYL 358
>gi|291616409|ref|YP_003519151.1| GatA [Pantoea ananatis LMG 20103]
gi|291151439|gb|ADD76023.1| GatA [Pantoea ananatis LMG 20103]
Length = 465
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +AV +LFD++GY T G E R AA+R + ++ L + GA G +D +
Sbjct: 70 PLAGIPYAVKNLFDVQGYSTLAGA-ELFRQRPAANRDAFAITQLQQAGALLSGMVNMDAY 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP +++ GGSS G+A AVAA LV FSLG DT G +RVP++ CG
Sbjct: 129 AYGFTTENSHYGATRNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
I G +P++G +S G P SLD +G FAR L V +L
Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVDDLAQVYDLL 231
>gi|397664187|ref|YP_006505725.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila subsp. pneumophila]
gi|395127598|emb|CCD05797.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila subsp. pneumophila]
Length = 483
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 184/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++PGGSS G+A AVA +LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCMAGFDSKDSTSVDRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGE---YFD 277
D +K P D++ +Q I KLF ENLG D
Sbjct: 242 PDYSAEIKKPIDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLF-------ENLGAEIVEID 294
Query: 278 SKVPSL---------KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
K+ L +N + +R R + + IE + + E+
Sbjct: 295 LKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + + L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ + QN + ++A+ ++G +++P G+ +K P + + +H + LL
Sbjct: 410 KIDDPIQNYLADVFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSENRLL 462
>gi|378768409|ref|YP_005196881.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Pantoea ananatis
LMG 5342]
gi|365187894|emb|CCF10844.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatA [Pantoea
ananatis LMG 5342]
Length = 465
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +AV +LFD++GY T G E R AA+R + ++ L + GA G +D +
Sbjct: 70 PLAGIPYAVKNLFDVQGYSTLAGA-ELFRQRPAANRDAFAIAQLQQAGALLSGMVNMDAY 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP +++ GGSS G+A AVAA LV FSLG DT G +RVP++ CG
Sbjct: 129 AYGFTTENSHYGATRNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
I G +P++G +S G P SLD +G FAR L V +L
Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVDDLAQVYDLL 231
>gi|119873082|ref|YP_931089.1| amidase [Pyrobaculum islandicum DSM 4184]
gi|119674490|gb|ABL88746.1| Amidase [Pyrobaculum islandicum DSM 4184]
Length = 401
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 37/373 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G++ AV D ++ G G P + + +T+ VV L+ GA +GKT + E A
Sbjct: 43 LCGMTLAVKDNIEVMGMPITNGAPYMKKI---SDKTAAVVRRLMAEGAVVLGKTNMHELA 99
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ N H+ NP PS++ GGSS G+A AVA + D +G DT G VR+P+A CG+
Sbjct: 100 LGVTNINPHFGPTRNPHDPSRITGGSSGGSAGAVAIGVADLGIGTDTGGSVRIPAALCGV 159
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
+G++P YG + GI P+S SLD VG+ AR K L+ + A +PR +
Sbjct: 160 VGYKPPYGKIPMDGIYPLSQSLDHVGFIARSVK-------ELVNILSAVGWAPRDL---- 208
Query: 238 DCFELLKIPADRVVQVVI-------KSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTN 290
P R V+ + EK F + V EN+G + D +
Sbjct: 209 -------SPPKRFRFAVLMGITEPSRYVEKAFWKAVEVLENIGGFRDE-------VFLDS 254
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
+ + E N+ +++ SV + D++ +G + + K I+ E
Sbjct: 255 TKYSAARAALLLSEAAANYYDYLRSVGEHMGRDVATLLGVGVALPSVAYIVAKRIKEEAT 314
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
+ L K ++VTPTTA + + ++ + + + I +++G ++VP
Sbjct: 315 QYFNILFKKYDVVVTPTTAIEAVPIEQADSIT--MRRKLLAYTEIFNLTGHPAISVPAPA 372
Query: 411 YDKCPTSVSFIAR 423
P + AR
Sbjct: 373 TSSLPVGLQVAAR 385
>gi|326478735|gb|EGE02745.1| glutamyl-tRNA(Gln) amidotransferase [Trichophyton equinum CBS
127.97]
Length = 627
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ V D+F+++G T G+ W + + AA+RT+ V L++ GA +GK
Sbjct: 202 AQKPLAGVRLGVKDIFNVKGLKTSNGNRAWYQLYPAANRTAIAVQNLIDAGAVVVGKMKT 261
Query: 114 DEFAYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGGVR 169
+FA T Y P NP Q PG SS+G A AA +D +LG DT G +R
Sbjct: 262 SQFANGETATADWVDYHAPFNPRGDGYQDPGSSSAGCAAGEAAYPWLDIALGSDTGGSIR 321
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
PS G+ G RPS+G VS G +P++ DT G ARDPK+
Sbjct: 322 SPSQLQGLFGNRPSHGLVSLEGAMPLAPQFDTAGLIARDPKL 363
>gi|255318454|ref|ZP_05359687.1| Asp-trnaasn/glu-trnagln amidotransferase a subunit [Acinetobacter
radioresistens SK82]
gi|262378684|ref|ZP_06071841.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase A subunit
[Acinetobacter radioresistens SH164]
gi|255304446|gb|EET83630.1| Asp-trnaasn/glu-trnagln amidotransferase a subunit [Acinetobacter
radioresistens SK82]
gi|262299969|gb|EEY87881.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase A subunit
[Acinetobacter radioresistens SH164]
Length = 370
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 167/382 (43%), Gaps = 39/382 (10%)
Query: 56 HPLTG-LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
H TG L V D DI G T G A + + VV +++ KT +
Sbjct: 9 HEGTGALKVMVKDSIDIRGLRTMAGSKALMEVEPALAN-AEVVDLILKADCVITAKTNLH 67
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A+ I G N + TP NP P +PGGSSSG+A AVAA L DFSLG DT G +R+P+A
Sbjct: 68 ELAFGITGINPVFGTPVNPKYPDLIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAAC 127
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ GF+PS+G VS G+ P+ +SLD VG FA +++ ++ ++++ Q
Sbjct: 128 CGVFGFKPSFGRVSRKGVYPVQSSLDCVGPFASSVEMIITAMQIIDPTFKSSEKIQHQPK 187
Query: 235 IADDCFELLKIPADRVVQVVIKS--TEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+A +L + AD V IK T+ + ++ E F +
Sbjct: 188 LA-----VLNVEADSAVWDCIKDYLTQTNLKVEPVQVTTFSEAFQAG------------- 229
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
M++I YE + ES K + PD+ + + + + + ++
Sbjct: 230 ----MQII-NYENWQAYGTLTESGK--ISPDVQQRLLNAAKTTLEQVRQAEDVKARFTQE 282
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
I LL+ L+ PT PP++ E L+ R F+L SG + +PL
Sbjct: 283 IDELLEQYDALILPTLPQIPPRVAEAENTVAFLNLTALVRPFNL------SGHPALNIPL 336
Query: 409 GYYDKCPTSVSFIARHGGDRFL 430
P + + R D L
Sbjct: 337 QTMTGMPVGLQLVGRKNADEQL 358
>gi|171682542|ref|XP_001906214.1| hypothetical protein [Podospora anserina S mat+]
gi|170941230|emb|CAP66880.1| unnamed protein product [Podospora anserina S mat+]
Length = 601
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 72/132 (54%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D +D+EGY T G P S TS V + GA +GK + EF
Sbjct: 183 PLDGVPTAVKDEYDMEGYSTTLGSPNVYADSSTNKTTSWCVQQIEAAGALILGKLSMHEF 242
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
G N HY TP NP + GGSSSG A AVAA L+ LG D G +R+PS+ CG
Sbjct: 243 GLDTTGNNPHYGTPRNPHNSNYYTGGSSSGTAYAVAAGLIPIGLGSDGGGSIRIPSSLCG 302
Query: 177 ILGFRPSYGAVS 188
I G +P++G +S
Sbjct: 303 IYGLKPTHGRLS 314
>gi|386334432|ref|YP_006030603.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia
solanacearum Po82]
gi|334196882|gb|AEG70067.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia
solanacearum Po82]
Length = 448
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G V+ G A A+ + V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVSAAGSRALAH-QPPATADAVAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+P+AF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
C + GF+P+ V G +P+STSLD+ G A
Sbjct: 189 CALTGFKPTARRVPMAGGVPLSTSLDSGGPLA 220
>gi|334145296|ref|YP_004538506.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Novosphingobium sp. PP1Y]
gi|333937180|emb|CCA90539.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Novosphingobium sp. PP1Y]
Length = 490
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ FA +LFD+ G+ T G R A RT+TV+S L GAT +G T +
Sbjct: 90 ADRPLAGMPFAAKNLFDVAGHPTLAGA-RINRDAPPARRTATVISRLANAGATLVGMTNM 148
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DEFAY N H+ NP ++M GGSS G+A AVAA +V +LG DT G +RVP++
Sbjct: 149 DEFAYGFATENAHFGATRNPCDETRMAGGSSGGSAAAVAAGIVPVALGSDTNGSIRVPAS 208
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CGI G +P++G +S G P +SLD VG FAR
Sbjct: 209 LCGIYGLKPTFGRLSRAGTYPFVSSLDHVGPFAR 242
>gi|398897016|ref|ZP_10647903.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM55]
gi|398177449|gb|EJM65129.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM55]
Length = 373
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G A+ D DI GY T G +A AAS+ + VV ++ G +GKT + E A+
Sbjct: 14 GKRVAIKDSIDIAGYPTCSGSRAFADA-PAASKNAEVVDAILNAGWQIVGKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N TP NP AP ++PGGSSSG+A AVAA L D ++G DT G VRVP+A CG+ G
Sbjct: 73 VTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGVAG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+P+YG VS +G P+++SLD VG FAR
Sbjct: 133 LKPTYGRVSRVGAHPLASSLDCVGPFAR 160
>gi|358012469|ref|ZP_09144279.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. P8-3-8]
Length = 369
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 166/378 (43%), Gaps = 40/378 (10%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
L V D DI+G T G ++ A + + VV ++ KT + E A+
Sbjct: 14 ALKVMVKDSIDIQGMKTMSGSKALMQSQPATTN-AEVVDRILLADCQITAKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
I G N + T NP P+ +PGGSSSG+A AVAA L DFSLG DT G +R+P+A CGI G
Sbjct: 73 ITGINHTFGTALNPKYPALIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAACCGIYG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL---LQLPFAAQRSPRQIIIA 236
+P++ VS G+ P +SLD VG FA +++ ++ Q + ++P+
Sbjct: 133 LKPTFNRVSRQGVQPAESSLDCVGPFANSVEMIETAMQIIDPTFQPIASLTQAPK----- 187
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
+L + AD V + +K F ++ L VP +
Sbjct: 188 ---LAVLDVKADTAV---LDCIQKFFAQKSL------------VPKHVSVDSFESAFQAG 229
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
M++I YE + E E+ L D+ + + E + +E + IR + I L
Sbjct: 230 MQII-NYESWQAYGELTET--GLLGKDVQHRLLKAAETTLQQVEQAECIRTKFIQEIDHL 286
Query: 357 LKDDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
+ L+ PT PPKL E L+ R F+L SG +++PL +
Sbjct: 287 FTEYDALLLPTLPQIPPKLIDAENTVAFLNLTALVRPFNL------SGHPAISIPLETEE 340
Query: 413 KCPTSVSFIARHGGDRFL 430
P + +A+ D L
Sbjct: 341 GLPVGLQIVAKQNADEHL 358
>gi|357383908|ref|YP_004898632.1| allophanate hydrolase [Pelagibacterium halotolerans B2]
gi|351592545|gb|AEQ50882.1| allophanate hydrolase [Pelagibacterium halotolerans B2]
Length = 601
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL G+ +AV D D+ G T P ++ + VV+ L GA C+GKT +D+
Sbjct: 63 RPLWGIPYAVKDNIDVAGMPTTAACPAFSYD---PGEDAFVVARLRAAGAICLGKTNLDQ 119
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + G Y P N P +PGGSSSG+AVAVA + F+LG DT G RVP+A
Sbjct: 120 FATGLVGVRTPYPVPNNAIDPEIVPGGSSSGSAVAVAHGIACFTLGTDTAGSGRVPAALN 179
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +PS G +S G++P +LDTV FA
Sbjct: 180 NLVGLKPSLGLLSARGVVPACRTLDTVSIFA 210
>gi|378948755|ref|YP_005206243.1| aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
[Pseudomonas fluorescens F113]
gi|359758769|gb|AEV60848.1| Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln)
amidotransferase subunit A [Pseudomonas fluorescens
F113]
Length = 475
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 86/149 (57%), Gaps = 4/149 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ DLF+I+G G A+ + T+T V L GA +GKT EF
Sbjct: 74 PLHGIPVAIKDLFEIDGKAITGG--SLAQKPRISRLTATAVQRLERAGAIIMGKTHTVEF 131
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+ GTN TP NP A + PGGSSSG+AVAVA L +LG DT G VR+P+
Sbjct: 132 AFGGWGTNAVMGTPWNPWDADVHRAPGGSSSGSAVAVAGGLASAALGTDTGGSVRIPAGM 191
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVG 203
CG++G + + G +S G+I + SLD+VG
Sbjct: 192 CGLVGLKTTRGLISRHGLIELCPSLDSVG 220
>gi|398352606|ref|YP_006398070.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sinorhizobium fredii
USDA 257]
gi|390127932|gb|AFL51313.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sinorhizobium fredii
USDA 257]
Length = 601
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ T P++A A +TVV L E GA +GKT +D+F
Sbjct: 67 PLWGIPFAVKDNIDVARMPTTAACPDYAYL---AEGDATVVRLLREAGALVVGKTNLDQF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N + +PGGSSSG+AVA A +V F+LG DT G R+P+
Sbjct: 124 ATGLVGVRTPYPVPRNAIDQALVPGGSSSGSAVATAHGIVSFALGTDTAGSGRIPAGLNN 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS GA+S G++P +LD V FA
Sbjct: 184 IVGLKPSIGALSTTGVVPACRTLDCVSIFA 213
>gi|171912162|ref|ZP_02927632.1| putative Amidase [Verrucomicrobium spinosum DSM 4136]
Length = 425
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 114/210 (54%), Gaps = 18/210 (8%)
Query: 8 LWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSD 67
L ++ +G++G L K K ++ D AFI +P PP+ H + AV D
Sbjct: 8 LGLVFAVGMSGSLTSCKSPVKELRGDR-AFISY-------RP-PPEGSH---YVKVAVKD 55
Query: 68 LFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLV-EGGATCIGKTVVDEFAYSINGTNKH 126
L D++G VT G E+ H+A ++ V V + +GKT ++E A + G N +
Sbjct: 56 LIDVKGEVTTAGS-EYLYKHAAPAQQDAVCMRPVRQRNVWIVGKTNLNELALGVTGINHY 114
Query: 127 YDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSY 184
+ TP N A + MPGGSSSG+AVAVA D ++G DT G +R PSA CGI G + +
Sbjct: 115 FGTPKNHLAGERRLMPGGSSSGSAVAVANGKADIAIGTDTAGSIRTPSACCGIFGLKTTK 174
Query: 185 GAVSHMGIIPISTS-LDTVGWFARD-PKIL 212
G +S G+ PIS LDTVG A + PK++
Sbjct: 175 GLISLKGVHPISPKHLDTVGPMANNVPKLV 204
>gi|296533661|ref|ZP_06896218.1| possible amidase, partial [Roseomonas cervicalis ATCC 49957]
gi|296266017|gb|EFH12085.1| possible amidase [Roseomonas cervicalis ATCC 49957]
Length = 408
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 170/388 (43%), Gaps = 23/388 (5%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+AP P G+ +V DLFD EG T G A+ T+ V+ L G +G+T
Sbjct: 23 RAPSPWAGIPISVKDLFDQEGVPTRAGA-AVLAEAPPAAGTAPAVARLQRAGFVVLGRTN 81
Query: 113 VDEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFA+S G N H+ TP +P A ++PGGSSSGAAVAVA + +LG DT G RV
Sbjct: 82 MVEFAFSGLGVNPHFGTPLSPYDRATGRLPGGSSSGAAVAVADGMGLGALGSDTGGSCRV 141
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+A CGI+G++P+ V G++P+S SLD++G A + ++ AA P
Sbjct: 142 PAALCGIVGYKPTARQVPLAGVLPLSPSLDSIGPLANTVGCCAVLHALMAGAESAAPPVP 201
Query: 231 RQIIIADDCFELLKIPADR-VVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHK 288
R + L IP + + + + F R V + + G + + +P L
Sbjct: 202 RPV-----AGLRLGIPEGTFLFEGLEPAVAAAFDRAVARLRDAGAFIERFALPELGDI-- 254
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE 348
+ N E H IE DP I + I IS + R
Sbjct: 255 ---PVANAAGGFAAAESYAWHRGLIERAGAGYDPRILSRIRRGAAISAADYQALVQARAR 311
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG-----CCQ 403
+ +A + L ++ PT A PP L ++E+ + +LL + + + C
Sbjct: 312 IIAAAAPRLAPYDAVLCPTAALTPPPL---SAVAEEAEYNRINLLLLRNTAAFNFLDGCS 368
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++P + P + GGD L
Sbjct: 369 ISLPCHAPGEAPVGLMLSRMGGGDAALF 396
>gi|421596163|ref|ZP_16040046.1| allophanate hydrolase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271723|gb|EJZ35520.1| allophanate hydrolase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 257
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D G+ T P ++ T + R +T V+ L GA IGKT +D+F
Sbjct: 68 PLYGVPVAVKDNIDALGFPTTAACPAFSYTPT---RDATAVARLRAAGAIIIGKTNLDQF 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N +PGGSSSG+AVAV A LV SLG DT G RVP+
Sbjct: 125 ATGLVGVRSPYGIPRNSIRDDLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLNN 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G +S G++P +LD + FA
Sbjct: 185 IVGLKPSLGMISTTGLVPACRTLDCISVFA 214
>gi|148242425|ref|YP_001227582.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus sp.
RCC307]
gi|166217726|sp|A5GTM0.1|GATA_SYNR3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|147850735|emb|CAK28229.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus sp.
RCC307]
Length = 485
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 20/162 (12%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT---------STVVSTLVEGGA 105
P PL G++ + D +G T + +SR STV L + GA
Sbjct: 63 PGPLAGVTIGIKDNLCTKGVTT-----------TCSSRMLENFVPPYESTVTERLWKAGA 111
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT +DEFA + + +NP P ++PGGSS G+A VAA D +LG DT
Sbjct: 112 VMVGKTNLDEFAMGSSTETSAFGMTSNPWDPGRVPGGSSGGSAACVAAGQCDVALGSDTG 171
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G +R P++FCG++G +P+YG VS G++ ++SLD +G F+R
Sbjct: 172 GSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPFSR 213
>gi|427706327|ref|YP_007048704.1| amidohydrolase, AtzE family [Nostoc sp. PCC 7107]
gi|427358832|gb|AFY41554.1| amidohydrolase, AtzE family [Nostoc sp. PCC 7107]
Length = 468
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 170/391 (43%), Gaps = 42/391 (10%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+P L G+ FAV +LFDI G VT + + A++ +T V+ L + G+ +G
Sbjct: 66 NSPGLLAGVPFAVKNLFDIAG-VTTLAGAKINAENPPATQDATAVAKLKQAGSVLVGAVN 124
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DE+AY N HY NP ++ GGSS G+A AVAA LV F+LG DT G +RVP
Sbjct: 125 MDEYAYGFVTENFHYGATHNPHDLQRVAGGSSGGSAAAVAAGLVPFTLGSDTNGSIRVPG 184
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQR 228
A CG+ GF+P+YG +S G+ S+S D +G FAR + + V VL + +R
Sbjct: 185 ALCGVFGFKPTYGRLSRAGVALFSSSFDHIGSFARSVQDIATVFDVLQGEDERDRICTKR 244
Query: 229 SPR-------------QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEY 275
P +I IADD F L+ A + V E L + EY
Sbjct: 245 PPELCSPQLHQDISDIRIAIADDYF--LQGAAPEALAAVQTVAEAL---------GVTEY 293
Query: 276 FDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEIS 335
+P K + +I E N H ++S DP I
Sbjct: 294 I--TIPEAK-------RARAAAFVITASEGANLHLNQLKSRPQDFDPATRDRFLAGALIP 344
Query: 336 ETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRAFSLL 393
+ + R R + + ++ I++ PTT P +G + M+ E+ R L
Sbjct: 345 SSWYLQAQRFRQWYRDRVREVFQNVDIILAPTTPIFAPLIGQQTMILAGEEILVRPHLGL 404
Query: 394 SIASVS--GCCQVTVPLGYYDKCPTSVSFIA 422
+S G ++VP+ D P V IA
Sbjct: 405 FTQPLSFIGLPVLSVPIQRLDALPLGVQLIA 435
>gi|445420878|ref|ZP_21435700.1| amidase [Acinetobacter sp. WC-743]
gi|444758445|gb|ELW82945.1| amidase [Acinetobacter sp. WC-743]
Length = 448
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 177/374 (47%), Gaps = 42/374 (11%)
Query: 53 KAPHPLT---GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
KA PL+ G+ A DLFD++G VT G H+ A + + V L G +G
Sbjct: 57 KAHAPLSLFDGVPIAWKDLFDVQGTVTTAGSKNREH-HAVAQQDADGVMQLTRMGMVNLG 115
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KT + EFAYS G N H+ TP N P +PGGSSSGAA +V +V S+G DT G +R
Sbjct: 116 KTNLTEFAYSGLGLNPHFGTPKNVVDPRCIPGGSSSGAATSVGQKIVPISMGTDTAGSIR 175
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRH--VGHVLLQLPF 224
+P++F G++G+R S S G+ P++ SLD+VG + RD +L +G + +P
Sbjct: 176 IPASFNGLVGYRSSSSRYSKKGVFPLAASLDSVGPISHSVRDCIVLDQLMLGQIQSNIPS 235
Query: 225 AAQRSPRQIIIADDCFELLKIPA--DRVVQVVIKSTEKLFGRQV-LKHENLGEYFDSKVP 281
Q QI + ++L P+ D V +++ E L ++ + H+ +G + ++
Sbjct: 236 QPQSKNMQIYVD---LDMLNHPSVQDCVKHNFLQTIEILEQAEIRVVHKRIGAFNQAQTL 292
Query: 282 SLKGFHKTNGE---LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV 338
G E L + + EF + + + A D S++I +
Sbjct: 293 IDSGQWLGAAEAYTLHEALLHCDQAEFMDQRVR--KRLLSAKDTLASSQI--------HL 342
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASV 398
+ + ++ +++ ++ +G L+TPTTA+ P+L E A L I +
Sbjct: 343 YQMAQHLKASLKTELA-----EGFLLTPTTAHTAPELAPLE---------ADEALFIQTN 388
Query: 399 SGCCQVTVPLGYYD 412
++T+P Y D
Sbjct: 389 LNTLRLTMPGSYLD 402
>gi|414172275|ref|ZP_11427186.1| AtzE family amidohydrolase [Afipia broomeae ATCC 49717]
gi|410893950|gb|EKS41740.1| AtzE family amidohydrolase [Afipia broomeae ATCC 49717]
Length = 471
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 152/350 (43%), Gaps = 47/350 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDIEG T G + R + +SR +T++ L GA +G + E+
Sbjct: 78 PLAGVPFAVKNLFDIEGLPTRAGS-KINRDRAVSSRDATLIERLEAAGAVLVGALNMGEY 136
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP ++M GGSS G+ AV LV +LG DT G +RVPS+FCG
Sbjct: 137 AYDFTGENVHDGPSRNPHDLTRMSGGSSGGSGSAVGGGLVPLALGSDTNGSIRVPSSFCG 196
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG +S P S D +G FAR + L + + A + P A
Sbjct: 197 IFGLKPTYGRLSRARSFPFVASFDHLGPFARTTRDL--------AIAYDAMQGPD----A 244
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQV--LKHENLGEYFDSKV-PSLKGFHKTNGEL 293
DD V I+ +L G+ + L+ G YF S + P +
Sbjct: 245 DDA---------ACVDRPIEPVTQLLGQGIGNLRIAVAGGYFKSSLSPEAREAVARVANA 295
Query: 294 KNVMR---------------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV 338
+V R +I E + H + + S DP + + I
Sbjct: 296 LSVTREVELPEAARARAAAFVITTSEGASLHLDRLRSRPSDFDPAVRDRLFAGAMIPSAY 355
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG-------GKEML 381
++ + R R+ + L + +++ P+T PKLG G EML
Sbjct: 356 VDRAQKFRRWYRTKVMELFEMVDVILAPSTPCVAPKLGQTTFVLDGVEML 405
>gi|410418467|ref|YP_006898916.1| amidase [Bordetella bronchiseptica MO149]
gi|408445762|emb|CCJ57424.1| probable amidase [Bordetella bronchiseptica MO149]
Length = 424
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 170/392 (43%), Gaps = 35/392 (8%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL GL AV D+ D T +G P +A A S + V+ + G +GKT
Sbjct: 64 PDPRRPLAGLPIAVKDIIDTADMPTAYGSPIYAGHRPAWS--AYCVAAIEAAGGIILGKT 121
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFA+S + NP AP+ PGGSS G+A VA + +L T G P
Sbjct: 122 ATSEFAHSAPPATR------NPHAPAHTPGGSSGGSAACVADFMAPAALATQTGGSTIRP 175
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-- 229
+AFCG++G++PS G + G+ P++ +LDTVG AR ++ + VL +P + S
Sbjct: 176 AAFCGVVGYKPSLGLIDRTGVRPMAEALDTVGLMARAVADIQLLAGVLAGVPASTPGSAA 235
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT 289
PR + +E + P+ + ++ E+ G +V ++VP L H
Sbjct: 236 PRIGLYRTPHWERIDAPSRDALLARLRRLER-HGARV-----------AEVPDLPALHPL 283
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
+ +++M + + + E + PAL + E G+ S +
Sbjct: 284 YQDQRDIMNHQAARALLHEYRQHREQLSPALRAAL--EAGQ--ACSPDALRAAWQRTRRA 339
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLG 409
R A + L D ++VTP P + NR +SLL + ++S +P G
Sbjct: 340 RRAYAELWADYDLIVTPAALGAAPAGIASS--GDSLLNRNWSLLGVPTLS------LPNG 391
Query: 410 YYDK-CPTSVSFIARHGGDRFLLDTVQNMYAS 440
+ P ++ HGGD LL + + A+
Sbjct: 392 ADPRGLPLAMQLAGSHGGDAALLGWARWIEAA 423
>gi|334118075|ref|ZP_08492165.1| amidohydrolase, AtzE family [Microcoleus vaginatus FGP-2]
gi|333460060|gb|EGK88670.1| amidohydrolase, AtzE family [Microcoleus vaginatus FGP-2]
Length = 489
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 158/349 (45%), Gaps = 29/349 (8%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ FAV +LFDI G T G + + A++ + VV+ L + GA +G +D
Sbjct: 75 PGPLAGVPFAVKNLFDIGGITTLAGS-KINADNPPATQDAAVVARLKQAGAVLVGTLNMD 133
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP +++ GGSS G+A AVAA V +LG DT G +RVP+A
Sbjct: 134 EYAYGFVTENSHYGPTRNPRDTTRIAGGSSGGSAAAVAAGFVPITLGSDTNGSIRVPAAL 193
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSP 230
CG+ GF+P+YG +S G S+SLD VG F R + + + +L + P QR P
Sbjct: 194 CGVFGFKPTYGRLSRAGAYLFSSSLDCVGPFGRSIRDMALLYDILQGPDSRDPVCTQRPP 253
Query: 231 R-------------QIIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF 276
+I +AD F + A V++V K+ +++ N G
Sbjct: 254 ELSSPQLNQGIEGLRIAVADGYFATGAESEAMEAVEIVAKALTN-----IVECGN-GTEK 307
Query: 277 DSKVPSLKGFHKTNGELKNVMR----LIQRYEFKNNHNEWIESVKPALDPDISAEIGEML 332
+ P + G + + R +I E N H + + S DP
Sbjct: 308 TTNPPKIGGLATVSIPESDRARAAAFIITACEGGNLHLDNLRSRPQDFDPATRDRFLAGT 367
Query: 333 EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
I T + R R I + + I++ P T P++G ++M+
Sbjct: 368 LIPATWYLQAQRFRQWYRDRIREIFQQTDIILAPATPIAAPEIGVEKMV 416
>gi|354594428|ref|ZP_09012467.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Commensalibacter intestini A911]
gi|353672104|gb|EHD13804.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Commensalibacter intestini A911]
Length = 449
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
K P PL G+ F V DLFD++G VT G + ++ A++ + V+ L GA +
Sbjct: 62 KDPGPLVGVPFGVKDLFDVKGEVTTAGS-KLLSQNNPANQDAKVIQRLCAAGAIPVATLN 120
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DEFAY N+H+ NP S+ GGSS G+A +V ++ FSLG DT G +RVP+
Sbjct: 121 MDEFAYGFVTDNEHHGMTHNPHDFSRFAGGSSGGSAASVGGGILSFSLGSDTNGSIRVPA 180
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL 222
+FCG+ G RP+YG + G+ P + S D +G F + + L+ V +V+ ++
Sbjct: 181 SFCGVWGIRPTYGVLPMQGVYPFAESFDRIGPFCQSIEDLKTVFNVMAEV 230
>gi|385333284|ref|YP_005887235.1| amidase family protein [Marinobacter adhaerens HP15]
gi|311696434|gb|ADP99307.1| amidase signature enzyme [Marinobacter adhaerens HP15]
Length = 470
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 188/404 (46%), Gaps = 38/404 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ F V DL D+EG T G + R A R + V L G GKT + E A
Sbjct: 78 LDGIPFGVKDLIDVEGCTTSRGSLLY-RNAPPAKRNAEAVERLGFQGMVFGGKTNLSELA 136
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S GTN + +P NP A + + GGSSSG+A VA+ L SLG DT G R+P+AFC
Sbjct: 137 FSGVGTNDLFGSPINPRATTGKYITGGSSSGSAAGVASGLWPVSLGTDTSGSSRIPAAFC 196
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRHVGHVLLQLPFAAQRSPRQ 232
G++GF+PS+ G+ P++ SLD +G A +D IL L +P +
Sbjct: 197 GVVGFKPSFDRYPLRGVAPLAPSLDHLGINALTVQDCVILDQALRGLAPIP--------K 248
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG----EYFDSKVPSLKGFHK 288
+ + E L +P ++ +Q + F + + NLG E S + +
Sbjct: 249 FRMLSEQTEFL-VPRNKSIQPRDPHIKDNFDKTLDLLSNLGFEIHEVDFSPYAEVDRLFE 307
Query: 289 TNGELKNVMRLIQRYE--FKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
+G L Q+YE F+N +I DP I + E ++ + IR
Sbjct: 308 IHGSLV-AHEAAQQYEALFENGLTSYI-------DPKILQRLKEGTLLNRKSYALLQKIR 359
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI-----ASVSGC 401
+R+ +SS + + IL+ PT PP + + +L + +AF+ L + A+ G
Sbjct: 360 RNLRAELSSSIGNK-ILLQPTVKILPPAI--ESVLKGVEEFKAFNKLILGNTMYANYLGM 416
Query: 402 CQVTVPLGYY-DKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+ +P+G+ + TS+ A G D FLL T + A+L +Q
Sbjct: 417 PAIAIPIGHAPNGFSTSIQLSAASGKDDFLLKTALFLEAALSKQ 460
>gi|425746237|ref|ZP_18864267.1| amidase [Acinetobacter baumannii WC-323]
gi|425486114|gb|EKU52486.1| amidase [Acinetobacter baumannii WC-323]
Length = 370
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 170/378 (44%), Gaps = 40/378 (10%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
L V D DI+G T G ++ AA + VV ++ KT + E A+
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGSQALMQSQ-AAPANAEVVDRILAADCQITAKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
I G N + T NP P +PGGSSSG+A A+AA L DF+LG DT G +R+P+A CG+ G
Sbjct: 73 ITGINHTFGTAINPKYPELIPGGSSSGSAAAIAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDC 239
+ ++G VS G+ P S+SLD VG FA ++L + + F AQ Q+
Sbjct: 133 LKSTFGRVSRAGVHPASSSLDCVGPFANSVEMLESAMQI-IDPTFHAQAELAQV----PK 187
Query: 240 FELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRL 299
L + AD V I +Q L NL +++GF M++
Sbjct: 188 LAWLNVAADSAVIETI--------QQYLTQANL----TVSTVTVEGFA---AAFDAGMQI 232
Query: 300 IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCK---SIRNEMRSAISSL 356
I YE + E ++ L D++ G +L+ ++T + K +R + + + +L
Sbjct: 233 I-NYENWQAYGELTQT--GLLGADVN---GRLLKAADTTLAQVKQAEQVRADFTAELDAL 286
Query: 357 LKDDGILVTPTTAYPPPKLGGKE----MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
L L+ PT PPKL E L+ R F+L SG ++VPL
Sbjct: 287 LAQYDALILPTLPQLPPKLVDAENTVAFLNLTALVRPFNL------SGHPAISVPLQTEQ 340
Query: 413 KCPTSVSFIARHGGDRFL 430
P + +A+ D +L
Sbjct: 341 GQPVGLQIVAKRNADEYL 358
>gi|381150586|ref|ZP_09862455.1| allophanate hydrolase [Methylomicrobium album BG8]
gi|380882558|gb|EIC28435.1| allophanate hydrolase [Methylomicrobium album BG8]
Length = 602
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FA+ D D+ G T P +A +++ VV L+ GA IGKT +D+F
Sbjct: 72 PLYGIPFAIKDNIDLAGLETTAACPSFAYR---PEKSAFVVQRLIAAGAIPIGKTNLDQF 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + GT Y N + GGSSSG+AVAVA LV F+LG DT G RVP+AF
Sbjct: 129 ATGLVGTRSPYGICRNAFDADYIAGGSSSGSAVAVAKGLVSFALGTDTAGSGRVPAAFNN 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +PS G +S G++P SLD V FA
Sbjct: 189 LVGVKPSRGLLSASGVVPACQSLDCVSIFA 218
>gi|302387682|ref|YP_003823504.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
saccharolyticum WM1]
gi|302198310|gb|ADL05881.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium
saccharolyticum WM1]
Length = 498
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D I+G T G + S T++ V L + GA +GKT +DEF
Sbjct: 73 PLAGVPVAVKDNICIQGMKTTCGSK--ILSDFVPSYTASAVENLKKAGAVILGKTNMDEF 130
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A Y NP P +PGGSS G+ AVAA ++LG DT G +R P++FCG
Sbjct: 131 AMGSTTETSAYGVTRNPWNPDHVPGGSSGGSCAAVAAAECFYALGSDTGGSIRQPASFCG 190
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+ G +P+YG +S G+I +SLD +G A+D
Sbjct: 191 VTGLKPTYGTISRYGLIAYGSSLDQIGPVAKD 222
>gi|374636672|ref|ZP_09708229.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanotorris
formicicus Mc-S-70]
gi|373558227|gb|EHP84581.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanotorris
formicicus Mc-S-70]
Length = 432
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 197/430 (45%), Gaps = 54/430 (12%)
Query: 32 QDFGAFIE--KLQLLPPPQPLPPKAP---HPLTGLSFAVSDLFDIEGYVTGFGHPEWART 86
+D AFI+ K ++L + L PL G A+ +++GY T
Sbjct: 17 KDINAFIDVNKDRVLKEAEELEKNEKLKDKPLYGKIIAIKANINVKGY-----------T 65
Query: 87 HSAASRT---------STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPS 137
S AS+T +TV+ L GA IG T +DEFA +G ++ NP A
Sbjct: 66 ISCASKTLENYIAPYDATVIKKLKANGALIIGMTNLDEFACGSSGETSYFGATKNPKAED 125
Query: 138 QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPIST 197
++PGGSSSG+A AV+ADL D +LG DT G +R P++ CG++GF+PSYG VS G+ ++
Sbjct: 126 RIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPSYGVVSRQGLCDLAM 185
Query: 198 SLDTVGWF---ARDPKILRHV-------GHVLLQLPFAAQRSPRQIIIADDCFELLKIPA 247
S D +G A D +L ++ ++ P + S + E + +
Sbjct: 186 SFDQIGPITKNAEDALLLTNIIKGKDPSDSTTVETPKFEKESVENYKVG-VVKEFMDVAD 244
Query: 248 DRVVQVVIKSTE--KLFGRQVLKHENLGEYFDSKVPSLKGFHKTN-GELKNVMRLI--QR 302
D++ + K E K G +++ E +Y D +P+ ++ N E + R +R
Sbjct: 245 DKIRDKIEKGIEVFKDLGCEIV--ELSYKYVDLALPT---YYLINYVEFFSATRKYDGRR 299
Query: 303 YEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGI 362
Y ++ E ++ L I I E E S + RN MR + +LKD +
Sbjct: 300 YGYRIEEVCGEEVLRRIL---IGKHISEK-EYSGKYYKRALQARNVMRKEMMKILKDVDV 355
Query: 363 LVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI-ASVSGCCQVTVPLGYYDKCPTSVSFI 421
+V PT P KLG K E Y A+ +L++ ++ G C VP G + P +
Sbjct: 356 IVGPTVPKLPHKLGEKLSPMEMY---AYDVLTVPTNICGICAGVVPCGDVNGVPVGLQIQ 412
Query: 422 ARHGGDRFLL 431
A+ D+ +L
Sbjct: 413 AKSFEDQKVL 422
>gi|339485824|ref|YP_004700352.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas
putida S16]
gi|338836667|gb|AEJ11472.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Pseudomonas putida S16]
Length = 475
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 163/384 (42%), Gaps = 35/384 (9%)
Query: 57 PLTGLSFAVSDLFDIEGY-VTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL G+ A+ DLF+I+G +TG + R T+T V L GA +GKT E
Sbjct: 74 PLHGIPLAIKDLFEIDGQAITGGSVAQQPRVSRV---TATAVQRLERAGAIILGKTHTVE 130
Query: 116 FAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
FA+ GTN TP NP + PGGSSSG+AVAVA+ L +LG DT G VR+P+
Sbjct: 131 FAFGGWGTNAVMGTPWNPWDRNVHHAPGGSSSGSAVAVASGLASAALGTDTGGSVRIPAG 190
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
CG++G + + G +S G+I + SLD+VG + + LL P Q
Sbjct: 191 MCGLVGLKTTRGLISRHGLIELCPSLDSVGPITHTVEDAAWMLDALLG-PDPLDPVSAQA 249
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG---------EYFDSKVPSLK 284
+ L K A + V+ ++ VLK +LG + + +P+
Sbjct: 250 PVFSAANGLNKPVAGLRIWVLPQAERAHVAPGVLKAYDLGLEQLAALGVQLIEQSLPT-- 307
Query: 285 GFHKTNGELKNVMRL---IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIEN 341
L+ MR+ + E + E DP + I +I
Sbjct: 308 -------TLEQCMRIAGGLMSAEGYASLGSLFERDDLRFDPHVQRRILSGRDIDAASYIQ 360
Query: 342 CKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS-IASVSG 400
+ R R A+ + + V PT A +G + D +LL A++
Sbjct: 361 LHNQRRAARHAMQEAMTNIDACVFPTNA-----IGSVPLDEVDEYGTPLALLGRFANLLN 415
Query: 401 CCQVTVPLGYYDK-CPTSVSFIAR 423
C V VP+G+ +K P S+ + R
Sbjct: 416 LCSVAVPIGFDEKGMPVSMQIVGR 439
>gi|374815591|ref|ZP_09719328.1| allophanate hydrolase [Treponema primitia ZAS-1]
Length = 583
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
HPL G+ FA+ D D+EG T G P +A T ++ VV L+ GA +GKT +D+
Sbjct: 66 HPLWGIPFAIKDNIDLEGVPTTAGCPAYAYT---PKTSAAVVDNLIAAGALPLGKTNLDQ 122
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + GT Y N + GGSS+G+AV VA F+LG DT G RVP+A
Sbjct: 123 FATGLVGTRSPYGEVHNALNGDYISGGSSAGSAVCVALGQAVFALGTDTAGSGRVPAALN 182
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++GF+PS GA +G++P SLD V FA
Sbjct: 183 NLVGFKPSRGAWPLLGVVPACESLDCVTVFA 213
>gi|148252308|ref|YP_001236893.1| amidase [Bradyrhizobium sp. BTAi1]
gi|146404481|gb|ABQ32987.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. BTAi1]
Length = 475
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFD+EG T G + R + A+R +T+++ + GA +G + E+
Sbjct: 74 PLAGVPFAVKNLFDVEGLPTRAGS-KINRDRAPAARDATLIARMEAAGAVLVGALNMGEY 132
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP P++M GGSS G+ AV LV +LG DT G +RVPS+FCG
Sbjct: 133 AYDFTGENVHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCG 192
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
I G +P+YG +S P SLD +G FAR
Sbjct: 193 IFGLKPTYGRLSRARSFPFVMSLDHLGPFAR 223
>gi|73749019|ref|YP_308258.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dehalococcoides
sp. CBDB1]
gi|109829693|sp|Q3ZYM5.1|GATA_DEHSC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|73660735|emb|CAI83342.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides sp.
CBDB1]
Length = 486
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PLTG+ A+ D+ +G T + + VV L + GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + N Y T NP ++PGGSS G+A VAA FSLG DT G +R P++FC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+ G++PSYG VS G++ ++SLD +G F +D
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
>gi|452204002|ref|YP_007484135.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A
[Dehalococcoides mccartyi DCMB5]
gi|452111061|gb|AGG06793.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A
[Dehalococcoides mccartyi DCMB5]
Length = 486
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PLTG+ A+ D+ +G T + + VV L + GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + N Y T NP ++PGGSS G+A VAA FSLG DT G +R P++FC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+ G++PSYG VS G++ ++SLD +G F +D
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
>gi|162452557|ref|YP_001614924.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sorangium cellulosum
So ce56]
gi|161163139|emb|CAN94444.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sorangium cellulosum
So ce56]
Length = 517
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 91/169 (53%), Gaps = 15/169 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA---ASRT------------STVVSTLV 101
PL G+ + D EG T G R + ASR +TVV+ L
Sbjct: 72 PLAGVPIGLKDALCTEGAPTTAGSKILTRAAAGGDGASRAPDPARGFRPQFDATVVTRLR 131
Query: 102 EGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLG 161
E GA GK +DEFA + N + NP PS++PGGSS G+AVAVAA + SLG
Sbjct: 132 EAGAILPGKCNMDEFAMGSSNENSAFGPVKNPWDPSRIPGGSSGGSAVAVAAGMTPGSLG 191
Query: 162 IDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
DT G +R P++ G++G +P+YG VS G+I ++SLD +G FA+D K
Sbjct: 192 SDTGGSIRQPASLTGVVGIKPTYGRVSRYGLIAFASSLDQIGPFAQDVK 240
>gi|113477617|ref|YP_723678.1| amidase [Trichodesmium erythraeum IMS101]
gi|110168665|gb|ABG53205.1| Amidase [Trichodesmium erythraeum IMS101]
Length = 462
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
K P L G+ FAV +L+DI G T G A + A++ +T V+ L + GA +G
Sbjct: 68 KNPGLLAGIPFAVKNLYDIAGLTTLAGAKINAE-NPPATQDATAVTKLKKAGAILVGALN 126
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DE+AY N HY NP S++ GGSS +A AVAA LV +LG DT G +RVP+
Sbjct: 127 MDEYAYGFVTENSHYGATPNPHDLSRISGGSSGASAAAVAAGLVPITLGSDTNGSIRVPA 186
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQR 228
+ CG+ GF+P+YG +S G+ ++SLD VG FAR + + V +L + P +R
Sbjct: 187 SLCGVFGFKPTYGRLSRAGVFLFASSLDNVGPFARSVRDIATVYDILQGSDTRDPVCTKR 246
Query: 229 SPRQIIIADDCFELLK 244
SP + C LK
Sbjct: 247 SP------ESCLPQLK 256
>gi|302653173|ref|XP_003018417.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291182061|gb|EFE37772.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 629
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ V D+FD++G T G+ W + + AA+RT+ V LV+ GA +GK
Sbjct: 199 AQKPLAGVRLGVKDIFDVKGLKTSNGNRAWYQLYPAANRTAIAVQNLVDAGAVVVGKMKT 258
Query: 114 DEFAYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVA------VAADLVDFSLGIDT 164
+FA T Y P NP Q PG SS+G A A +D +LG DT
Sbjct: 259 SQFANGETATADWVDYHAPFNPRGDGYQDPGSSSAGCAAGEEIRSQAAYPWLDIALGSDT 318
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
G +R PS G+ G RPS+G VS G +P++ DT G ARDP++
Sbjct: 319 GGSIRSPSQLQGLFGNRPSHGLVSLEGAMPLAPQFDTAGLIARDPRL 365
>gi|384205127|ref|YP_005590866.1| putative amidase [Bordetella pertussis CS]
gi|332383241|gb|AEE68088.1| putative amidase [Bordetella pertussis CS]
Length = 461
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 51 PPKAPHPLTGLSFAVSDLFDIEGYV--TGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
PP A PL G+ A D+F + G V G HP W A R +TV+ L G+ +
Sbjct: 53 PPPASLPLAGVGLAHKDIFVLPGRVPECGARHP-W---PDAPVRAATVIRRLAAAGSRPL 108
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
+ E A G N Y P NP GGSSSG+AVAVAA L SLG DT G V
Sbjct: 109 AALAMAEHASGATGENPRYPLPRNPLDADAAVGGSSSGSAVAVAAGLCYGSLGTDTAGSV 168
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
R+P+A CG++G P+ G + G+ P++ LDTVG AR
Sbjct: 169 RIPAATCGVVGLMPTRGLLPGDGVAPLAGELDTVGLLAR 207
>gi|302496001|ref|XP_003010006.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291173539|gb|EFE29366.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 629
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ V D+FD++G T G+ W + + AA+RT+ V LV+ GA +GK
Sbjct: 199 AQKPLAGVRLGVKDIFDVKGLKTSNGNRAWYQLYPAANRTAIAVQNLVDAGAVVVGKMKT 258
Query: 114 DEFAYSINGTNK--HYDTPTNPAAPS-QMPGGSSSGAAVA------VAADLVDFSLGIDT 164
+FA T Y P NP Q PG SS+G A A +D +LG DT
Sbjct: 259 SQFANGETATADWVDYHAPFNPRGDGYQDPGSSSAGCAAGEEIRSQAAYPWLDIALGSDT 318
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
G +R PS G+ G RPS+G VS G +P++ DT G ARDP++
Sbjct: 319 GGSIRSPSQLQGLFGNRPSHGLVSLEGAMPLAPQFDTAGLIARDPRL 365
>gi|398932709|ref|ZP_10665708.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM48]
gi|398161711|gb|EJM49937.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM48]
Length = 451
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 181/395 (45%), Gaps = 38/395 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D +VT +G +A SR + V L E GA +GKT+ EF
Sbjct: 79 PLHGIPVAVKDNIDTFDHVTTYGSAHFAGFKP--SRDALCVQRLREAGAVIVGKTLTHEF 136
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G NP + GGSS+G+A AVA+ +V +LG DT G +R+P+A C
Sbjct: 137 AYGPTGDRSLQGAARNPWDARCITGGSSAGSAAAVASGMVPLALGTDTGGSIRIPAALCA 196
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRHVGHVLLQLPFAAQRSPRQI 233
++GF+PS+ +V G+ P+++SLD VG A D ++L V + P A R R
Sbjct: 197 VVGFKPSFASVPLEGVFPLASSLDHVGPIANHVEDARLLFEVVAGRVCAPEANPRPLRVG 256
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
I F + +R ++ ++LFG + L P G +
Sbjct: 257 WITTGSFGPVDAELNR---QAYQAAQQLFGEALQDTAELE-------PLAAG-------M 299
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNE----- 348
K+ + ++QR E + H E ++ + E+ E LE+S V + IR +
Sbjct: 300 KDTLLVLQRAEAFDLHAERMQDAPHKFE----QEVRERLELSGEV-RGWQYIRAQASQAR 354
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRAFSLLSIAS---VSGCCQ 403
+ A++ L + LV+P+ P + +E+ +D RA +LLS S ++G
Sbjct: 355 FKVAMARLFESYDFLVSPSVPITAPAVDAREVRIGDQDIDVRA-ALLSHTSAWNLTGLPA 413
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 438
+++P+G P + I G D LL + +
Sbjct: 414 ISLPVGLVRGMPVGLQVIGAAGEDDRLLRVMAQRF 448
>gi|425448168|ref|ZP_18828147.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9443]
gi|389731149|emb|CCI04784.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9443]
Length = 438
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDI+G VT G + R H AA + + + TL GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP S++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 127 YGFVTENAHYGATPNPRDTSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWF 205
+G +P++G VS G+ +SLD G+F
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHPGFF 214
>gi|289433014|ref|YP_003462887.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Dehalococcoides
sp. GT]
gi|452205501|ref|YP_007485630.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A
[Dehalococcoides mccartyi BTF08]
gi|288946734|gb|ADC74431.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides sp.
GT]
gi|452112557|gb|AGG08288.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A
[Dehalococcoides mccartyi BTF08]
Length = 486
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PLTG+ A+ D+ +G T + + VV L + GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + N Y T NP ++PGGSS G+A VAA FSLG DT G +R P++FC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+ G++PSYG VS G++ ++SLD +G F +D
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
>gi|16126850|ref|NP_421414.1| amidase [Caulobacter crescentus CB15]
gi|221235632|ref|YP_002518069.1| amidase [Caulobacter crescentus NA1000]
gi|13424188|gb|AAK24582.1| pyrazinamidase/nicotinamidase [Caulobacter crescentus CB15]
gi|220964805|gb|ACL96161.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Caulobacter
crescentus NA1000]
Length = 464
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 152/346 (43%), Gaps = 47/346 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFD+EG T G + R + + +T+V L GA +G +DEF
Sbjct: 68 PLAGVPFAVKNLFDLEGLPTLAGS-KIRRAAAPPAHDATLVQRLTAAGAVLVGALNMDEF 126
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N H NP P+++ GGSS G+A AVAA LV +LG DT G +R+P+ CG
Sbjct: 127 AYGFVTENAHDGPVRNPHDPTRIAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRIPAGLCG 186
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G +P+YG +S G+ P SLD VG FA RS + +A
Sbjct: 187 VFGLKPTYGRLSRQGVFPFVESLDHVGPFA---------------------RSVEDLALA 225
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGR------QVLKHENLGEYFDS----KVPSLKGF 286
+++L+ P + I+ E L GR Q L+ LG +F +V + G
Sbjct: 226 ---YDVLQGPDPSGDPICIRDAEPLAGRLDALAEQPLRVGVLGGWFQQGAFPEVLAALGR 282
Query: 287 HKTNGELKNVMRL------------IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
E ++ + L + +E H+E + DP + + +
Sbjct: 283 VADALEARDEVTLQNAQAARAAAFCLTAFEGGELHHEDLARRAMDYDPAVRDRLLAGALL 342
Query: 335 SETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
V E + R R + + + IL+ P + P P +G M
Sbjct: 343 PAGVAEAAQRFRTIFRDEVREVFQRYDILLAPASVCPAPPIGQATM 388
>gi|422405004|ref|ZP_16482052.1| hypothetical protein Pgy4_14141, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330879198|gb|EGH13347.1| hypothetical protein Pgy4_14141 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 325
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPL P G+ A DLFD+ G VT G S A + V L G
Sbjct: 70 QPL-----SPFDGVLIAWKDLFDVAGSVTTAGA-AVRNNLSPALLDAPSVGLLARSGMVS 123
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT + EFAYS G N H+ TP NP + ++PGGSSSG+AVAVA V ++G DT
Sbjct: 124 LGKTNLSEFAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTA 183
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G +RVP+A G++GFR + S G+ P++ +LD+VG R
Sbjct: 184 GSIRVPAALNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTR 225
>gi|300864621|ref|ZP_07109479.1| amidase [Oscillatoria sp. PCC 6506]
gi|300337370|emb|CBN54627.1| amidase [Oscillatoria sp. PCC 6506]
Length = 463
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ FAV +LFDI G VT + + A+ +T+V+ L + GA +G +D
Sbjct: 71 PGPLAGVPFAVKNLFDIAG-VTTLAGAKINQETPPATSDATLVTRLKQAGAILVGAQNMD 129
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP +++ GGSS G+A AVA LV SLG DT G +RVPSA
Sbjct: 130 EYAYGFVTENSHYGPTRNPHDTTRVAGGSSGGSAAAVAGGLVPLSLGSDTNGSIRVPSAL 189
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
CGI G +P+YG +S G P SLD VG FAR + + V +L
Sbjct: 190 CGIFGLKPTYGRLSRAGAYPFVGSLDHVGPFARSVRDIAAVYDIL 234
>gi|428202424|ref|YP_007081013.1| amidohydrolase, AtzE family [Pleurocapsa sp. PCC 7327]
gi|427979856|gb|AFY77456.1| amidohydrolase, AtzE family [Pleurocapsa sp. PCC 7327]
Length = 462
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 152/334 (45%), Gaps = 18/334 (5%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ FAV +LFDI G T G A + ASR +T V+ L + GA +G +D
Sbjct: 68 PGILAGVPFAVKNLFDIAGMTTLAGSKINAE-NPPASRDATAVARLKQAGAILVGSLNMD 126
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP +++ GGSS G+A AVAA LV SLG DT G +RVP+A
Sbjct: 127 EYAYGFVTENAHYGATHNPHDLTRIAGGSSGGSAAAVAAGLVPISLGSDTNGSIRVPAAL 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSP 230
CGI G +P+YG +S G S SLD +G FAR + + V +L + P QR P
Sbjct: 187 CGIFGLKPTYGRLSRAGTFLFSASLDCIGPFARSQRDIAAVFDILQGSDPRDPICTQRPP 246
Query: 231 RQIIIADDCFELLKIPADRVVQ-VVIKSTEKLF--GRQVLKHENLGEYFDSKVPSLKGFH 287
+ CF L DR ++ + I + F G ++ E + + + +
Sbjct: 247 QP------CFPEL----DRGIEGLRIAVADGYFTQGAELEAIEAVERVAQALGVAQRVII 296
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
+ + +I E N H + + S DP I + + R
Sbjct: 297 PESHRARAAAYVITAVEGSNLHLKNLRSRPRDFDPATRDRFLAGALIPASWYVQAQRFRR 356
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML 381
R + + I++ PTT P +G ++M+
Sbjct: 357 WYRDRVREIFDRVDIILAPTTPCVAPPIGQEKMV 390
>gi|379004675|ref|YP_005260347.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pyrobaculum oguniense TE7]
gi|375160128|gb|AFA39740.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pyrobaculum oguniense TE7]
Length = 401
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 162/367 (44%), Gaps = 26/367 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL AV D ++ G G P R A RT+ VV L+ GA IGKT + E A
Sbjct: 44 LCGLVVAVKDNIEVAGMPITNGAPYMRRM---ADRTAPVVRRLIAEGAVVIGKTNMHELA 100
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
N HY NP PS++ GGSS G+A AVA + D +G DT G VR+P+A CG+
Sbjct: 101 LGATNINPHYGPTRNPHDPSRITGGSSGGSAGAVAIGVADLGVGTDTGGSVRIPAALCGV 160
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI-IIA 236
+G++P YG + G++P++ SLD VG+ R K L H+ AA P ++ +
Sbjct: 161 VGYKPPYGKIPTEGVLPLAQSLDHVGFITRTVKELVHILS-------AAGWGPAELPQMK 213
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
F +L A+ K +K F + V E++G D G+
Sbjct: 214 RFRFAVLMGVAENT-----KHVDKAFWKAVSVLESIGGIRDE-------VFIDAGKYGAA 261
Query: 297 MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSL 356
I E N+ ++ S + D++A + + K ++ E SL
Sbjct: 262 RAAILLSEAAANYYHYLRSAAEHMGRDVAALLSAGAALPAVAYITAKRVKEEATRFFESL 321
Query: 357 LKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPT 416
K ++VTPTTA + L D + R + + +++G ++VP D P
Sbjct: 322 FKKYDVVVTPTTAAEALAIEEAGKL--DVRGRLLAYTELFNLTGHPAISVPAPASD-LPV 378
Query: 417 SVSFIAR 423
+ AR
Sbjct: 379 GLQIAAR 385
>gi|284997770|ref|YP_003419537.1| amidase [Sulfolobus islandicus L.D.8.5]
gi|284445665|gb|ADB87167.1| Amidase [Sulfolobus islandicus L.D.8.5]
Length = 397
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 169/390 (43%), Gaps = 40/390 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L ++F + D+ +G T G + + + VV ++ G IGKT EFA
Sbjct: 27 LKDVTFGIKDVILTKGIRTTAG--SRILENYVPQKNAYVVDAILREGGKIIGKTNTHEFA 84
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
T+ NP P ++ GGSS G+AVAV D++D +G DT G VR+PS+ CG+
Sbjct: 85 LGATNTSSIGGPARNPVNPERISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGV 144
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDP-KILRHVGHVLL-----QLPFAAQRS-P 230
+GF+P+ G + G+IP S SLDTVG +D +LR V +L ++ A R+ P
Sbjct: 145 IGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLRRVFDAILPNEKKKVEIAKLRTRP 204
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD---SKVPSLKGFH 287
R + D E+ +I + + L YFD +P L+ +
Sbjct: 205 RLGLFLFDEMEVSRILLKEI------------------YAKLSSYFDIVEVDLPLLRQYG 246
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
R I E + H +WI D + + ++IS T + R
Sbjct: 247 ------SKTRRTISLAEASSYHKDWITENSNKYFKDTYTLLLDGMKISATDYIDAIRYRR 300
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS--IASVSGCCQVT 405
+ L K+ +++PTT PK+ ++LS Q R + + + + +V G ++
Sbjct: 301 VLIEEYIKLFKNIDFILSPTTKIVAPKIS--DVLSNPLQFREYLIANTELFNVVGAPSIS 358
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
+P ++ P + D LL+ +
Sbjct: 359 IPFSTLNELPVGLMISGELYKDGDLLEVTE 388
>gi|227830345|ref|YP_002832125.1| amidase [Sulfolobus islandicus L.S.2.15]
gi|227456793|gb|ACP35480.1| Amidase [Sulfolobus islandicus L.S.2.15]
Length = 397
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 169/390 (43%), Gaps = 40/390 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L ++F + D+ +G T G + + + VV ++ G IGKT EFA
Sbjct: 27 LKDVTFGIKDVILTKGIRTTAG--SRILENYVPQKNAYVVDAILREGGKIIGKTNTHEFA 84
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
T+ NP P ++ GGSS G+AVAV D++D +G DT G VR+PS+ CG+
Sbjct: 85 LGATNTSSIGGPARNPVDPERISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGV 144
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDP-KILRHVGHVLL-----QLPFAAQRS-P 230
+GF+P+ G + G+IP S SLDTVG +D +LR V +L ++ A R+ P
Sbjct: 145 IGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLRRVFDAILPNEKKKVEIAKLRTRP 204
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD---SKVPSLKGFH 287
R + D E+ +I + + L YFD +P L+ +
Sbjct: 205 RLGLFLFDEMEVSRILLKEI------------------YAKLSSYFDIVEVDLPLLRQYG 246
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
R I E + H +WI D + + ++IS T + R
Sbjct: 247 ------SKTRRTISLAEASSYHKDWITENSNKYFKDTYTLLLDGMKISATDYIDAIRYRR 300
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS--IASVSGCCQVT 405
+ L K+ +++PTT PK+ ++LS Q R + + + + +V G ++
Sbjct: 301 VLIEEYIKLFKNIDFILSPTTKIVAPKIS--DVLSNPLQFREYLIANTELFNVVGAPSIS 358
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
+P ++ P + D LL+ +
Sbjct: 359 IPFSTLNELPVGLMISGELYKDGDLLEVTE 388
>gi|147669785|ref|YP_001214603.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dehalococcoides
sp. BAV1]
gi|189045247|sp|A5FQ07.1|GATA_DEHSB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|146270733|gb|ABQ17725.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Dehalococcoides sp. BAV1]
Length = 486
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PLTG+ A+ D+ +G T + + VV L + GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + N Y T NP ++PGGSS G+A VAA FSLG DT G +R P++FC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+ G++PSYG VS G++ ++SLD +G F +D
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
>gi|333918269|ref|YP_004491850.1| putative glutamyl-tRNA(Gln) amidotransferase [Amycolicicoccus
subflavus DQS3-9A1]
gi|333480490|gb|AEF39050.1| putative glutamyl-tRNA(Gln) amidotransferase [Amycolicicoccus
subflavus DQS3-9A1]
Length = 518
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 8/221 (3%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G FAV D D+ G T PE+A T R++T V LV+ GA +GK +D+F
Sbjct: 6 PLAGTVFAVKDNIDVAGLPTTAACPEFAYTPE---RSATGVQRLVDAGAIVLGKANLDQF 62
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + GT Y N P ++ GGSSSG+AVAVA + DF+LG DT G RVP+A G
Sbjct: 63 ATGLVGTRSPYGACRNAHHPERIAGGSSSGSAVAVALGIADFALGTDTAGSGRVPAALNG 122
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWF----ARDPKILRHVGHVLLQLPFAAQRSPRQ 232
I+G + + G + G++P S D + F A +++R + + P A++ P
Sbjct: 123 IVGIKATLGLIPTDGVVPACPSYDCLTAFAPALADAVRVMRTMAGPSPRDP-ASRPWPTD 181
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLG 273
+A + IP+ + + ++ + F V++ E G
Sbjct: 182 ARLAAPVTPHVAIPSQKDLTLLSHEARECFAAAVMQLEAAG 222
>gi|410418879|ref|YP_006899328.1| amidase [Bordetella bronchiseptica MO149]
gi|427823498|ref|ZP_18990560.1| putative amidase [Bordetella bronchiseptica Bbr77]
gi|408446174|emb|CCJ57840.1| putative amidase [Bordetella bronchiseptica MO149]
gi|410588763|emb|CCN03823.1| putative amidase [Bordetella bronchiseptica Bbr77]
Length = 461
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 51 PPKAPHPLTGLSFAVSDLFDIEGYV--TGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
PP A PL G+ A D+F + G V G HP W A R +TV+ L G+ +
Sbjct: 53 PPPASLPLAGVGLAHKDIFVLPGRVPECGARHP-W---PDAPVRAATVIRRLAAAGSRPL 108
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
+ E A G N Y P NP GGSSSG+AVAVAA L SLG DT G V
Sbjct: 109 AALAMAEHASGATGENPRYPLPRNPLDADAAVGGSSSGSAVAVAAGLCYGSLGTDTAGSV 168
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
R+P+A CG++G P+ G + G+ P++ LDTVG AR
Sbjct: 169 RIPAATCGVVGLMPTRGLLPGDGVAPLAGELDTVGVLAR 207
>gi|386399058|ref|ZP_10083836.1| amidohydrolase, AtzE family [Bradyrhizobium sp. WSM1253]
gi|385739684|gb|EIG59880.1| amidohydrolase, AtzE family [Bradyrhizobium sp. WSM1253]
Length = 465
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 147/339 (43%), Gaps = 41/339 (12%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ FAV +LFD+ G T G + R + A+R +T++ + GA +G + E+
Sbjct: 71 PLTGVPFAVKNLFDVAGLATRAGS-KINRDRAPATRDATLIERMEAAGAVLVGALNMGEY 129
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP ++M GGSS G+ AV LV +LG DT G +RVPS+FCG
Sbjct: 130 AYDFTGENVHDGPSRNPHDTTRMSGGSSGGSGSAVGGALVPIALGSDTNGSIRVPSSFCG 189
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG +S P SLD +G FAR L L F A + P A
Sbjct: 190 IFGLKPTYGRLSRARSFPFVASLDHLGPFARS--------ATDLALAFDAMQGPD----A 237
Query: 237 DDCF--------ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHK 288
DD L + A+ V + I F +NL F V ++ K
Sbjct: 238 DDAACTTTRGLEPTLPLLANPVSDLRIAIAGGYF------QQNL---FPEAVEAVSRVAK 288
Query: 289 TNGELKNV-----------MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET 337
G + V +I E + H + + DP + + +
Sbjct: 289 ALGATRVVDVPEAARARAAAYVITTTEGASLHLDRLRKRPNDFDPAVRDRLIAGAMVPAP 348
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG 376
+++ + R R+ ++ + K +L+ P T PKLG
Sbjct: 349 LVDRAQKFRRWYRTQLAEIFKSVDVLIAPATPCTAPKLG 387
>gi|398920559|ref|ZP_10659373.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398167734|gb|EJM55775.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 374
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G A+ D DI G+ T G +A AA++ + VV +++ G +GKT + E A+
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFADA-PAATKNAEVVDAILDAGWQIVGKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N TP NP AP ++PGGSSSG+A AVAA L D ++G DT G VRVP+A CGI G
Sbjct: 73 VTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+P+YG VS +G P+ +SLD VG FAR
Sbjct: 133 LKPTYGRVSRIGAHPLESSLDCVGPFAR 160
>gi|187927611|ref|YP_001898098.1| amidase [Ralstonia pickettii 12J]
gi|187724501|gb|ACD25666.1| Amidase [Ralstonia pickettii 12J]
Length = 452
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 176/403 (43%), Gaps = 35/403 (8%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G VT G A A+ + V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVTAAGSRALA-DQPRATTDAAAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+PSAF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
C + GF+P+ V G +P+STSLD+ G A V VL + S
Sbjct: 189 CNLTGFKPTARRVPMTGGVPLSTSLDSGGPLANSVDCCAIVDAVL------SGES----- 237
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK--GFHKTNGE 292
+D F+ +P + + T+ G + + F+ V L+ G H E
Sbjct: 238 -GNDAFDTTAVP---LAGLRFGITQDFVGADL--DNTVAVAFERAVERLERAGAHIVRFE 291
Query: 293 LKNVMRL--------IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS 344
+++L E H + + DP ++ I ++S + +
Sbjct: 292 FPELLQLPEINSGGGFSAAESWAWHRSLLARAEVQYDPRVATRIRRGEQMSAAAYIDVIN 351
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVS----- 399
R M +A L + + PT A PP++ E+ +D Q + L++ + S
Sbjct: 352 ARARMIAAARKRLGNFDAWLMPTVAIVPPEVAPLEV--DDAQFFRINALTLRNPSVINFL 409
Query: 400 GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
C +T+P+ + P +S D +L + + A+L+
Sbjct: 410 DGCALTLPVHVAGELPVGLSLCGLANDDARILRVGRAVEAALR 452
>gi|421469735|ref|ZP_15918176.1| amidase [Burkholderia multivorans ATCC BAA-247]
gi|400229263|gb|EJO59122.1| amidase [Burkholderia multivorans ATCC BAA-247]
Length = 449
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 171/393 (43%), Gaps = 33/393 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V FD+ GY T G P R AA +++V LV+ GA + T +DEF
Sbjct: 73 PLAGVPFVVKSNFDVAGYATVAGSPTRLRA-PAARCDASMVDRLVQAGAVPVAATHMDEF 131
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A G N H+ PA S+M GGSSSG+A AVAA V +LG DT G +R P+A CG
Sbjct: 132 ACGATGVNPHFGAVRLPADASRMTGGSSSGSAAAVAAGHVPLALGSDTNGSIRAPAALCG 191
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-----QLPFAAQRSPR 231
+ +P++G +S G +P ++SLD G FA + L + L P +P
Sbjct: 192 VWAIKPTHGRLSMDGCVPYASSLDAAGGFAANLDDLCALYDALSCTSRDDAPIG--HAPL 249
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
++ + FE AD V+ ++ F +H+++ VP + +
Sbjct: 250 RVGVLTGEFERR---ADAQVRRAVERASACFA----QHDHV-----QAVPIDESVLE--- 294
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
++ RL+ +E H +++ + + I L I + + + R E ++
Sbjct: 295 PIRASARLVSNFEVARRHRALLDADASRVSAHLRERIRTGLAIGDAAYADALAHRAEWQA 354
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS-------LLSIASVSGCCQV 404
+++L + IL+ P T Y P+ + D A S +G V
Sbjct: 355 RLAALFERFDILIAPATPYVAPRFSDATV---DVNGEALDPKTTLGMFTQPISFAGLPVV 411
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+ P + P V I R G +R L + +
Sbjct: 412 SAPCHAKGELPAGVQLIGRPGDERRCLAAARRL 444
>gi|395005219|ref|ZP_10389111.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
gi|394316799|gb|EJE53500.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
Length = 444
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PL GL+ +V DLFDI G T G A + AA + S V+ L GA+ IG+T + E
Sbjct: 59 QPLAGLAVSVKDLFDIAGQATTAGSTALAGS-PAAQQDSPAVARLRAAGASLIGRTNMVE 117
Query: 116 FAYSINGTNKHYDTPTN-----PAAP--SQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
FA+S G N H+ TP A P +++PGGSSSGAAV+VA LG DT G +
Sbjct: 118 FAFSGVGVNPHFGTPAAWDARFGALPGEARVPGGSSSGAAVSVATGAAFVGLGSDTGGSI 177
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK--ILRH 214
R+P+A GI+GF+ + V G +P+ST+LDT R + IL H
Sbjct: 178 RIPAALNGIVGFKNTQRLVPTTGAVPLSTTLDTACAMTRSVRDAILVH 225
>gi|33600128|ref|NP_887688.1| amidase [Bordetella bronchiseptica RB50]
gi|33567726|emb|CAE31640.1| putative amidase [Bordetella bronchiseptica RB50]
Length = 461
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 51 PPKAPHPLTGLSFAVSDLFDIEGYV--TGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
PP A PL G+ A D+F + G V G HP W A R +TV+ L G+ +
Sbjct: 53 PPPASLPLAGVGLAHKDIFVLPGRVPECGARHP-W---PDAPVRAATVIRRLAAAGSRPL 108
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
+ E A G N Y P NP GGSSSG+AVAVAA L SLG DT G V
Sbjct: 109 AALAMAEHASGATGENPRYPLPRNPLDADAAVGGSSSGSAVAVAAGLCYGSLGTDTAGSV 168
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
R+P+A CG++G P+ G + G+ P++ LDTVG AR
Sbjct: 169 RIPAATCGVVGLMPTRGLLPGDGVAPLAGELDTVGVLAR 207
>gi|196228326|ref|ZP_03127193.1| Amidase [Chthoniobacter flavus Ellin428]
gi|196227729|gb|EDY22232.1| Amidase [Chthoniobacter flavus Ellin428]
Length = 431
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
PK H GL AV D D+ G VT G A+ + A + ++ G +GKT
Sbjct: 45 PKEAHK-PGLKLAVKDNIDMRGVVTTAGSEYLAKNNPPAKADAQCLAIARARGVPIVGKT 103
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
+ EFA + +G N++Y TP +P + +PGGSS G+AVAVA D S G DT G VR
Sbjct: 104 NLSEFAVAPSGFNEYYGTPKSPLSHMHRLIPGGSSCGSAVAVARGYADVSFGTDTAGSVR 163
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTS-LDTVG 203
VP+A CG++G + ++G VS G++P+ LDTVG
Sbjct: 164 VPAACCGVVGLKTTFGLVSLHGVVPVEPKHLDTVG 198
>gi|300710764|ref|YP_003736578.1| Amidase [Halalkalicoccus jeotgali B3]
gi|448295094|ref|ZP_21485167.1| Amidase [Halalkalicoccus jeotgali B3]
gi|299124447|gb|ADJ14786.1| Amidase [Halalkalicoccus jeotgali B3]
gi|445585064|gb|ELY39368.1| Amidase [Halalkalicoccus jeotgali B3]
Length = 426
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 37/389 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ V D+F++EG+ G + T + S V L E GA +GKTV EF
Sbjct: 71 PLYGVPVGVKDIFNVEGFPMKAGSTVPSETVTGPEADS--VRALKEAGALVLGKTVTTEF 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G + NP P PGGSSSG+A AVAA +LG T+G V P+AFCG
Sbjct: 129 AYFEPGPTR------NPHDPEHTPGGSSSGSAAAVAAGFCPLALGSQTIGSVIRPAAFCG 182
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I+G +P+YG + G++P++ S+D VG+F +D + VL + P +
Sbjct: 183 IVGLKPTYGRIPIGGVLPVAPSVDHVGFFTQDVAGAQLAASVLYE-----HWRPESTGVP 237
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNV 296
L +P + + + F QV + E G Y +V L+ N + +
Sbjct: 238 -----TLGVPEGPYLDQADPAAREAFDEQVARLETAG-YEVRRVALLEDIDAINDRHQRL 291
Query: 297 M----RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
+ L F + + + E+ + ++GE+ E + R +R A
Sbjct: 292 VAAETALSHSERFAEHGDRYAEATADLIREGHDVDVGELCE--------ARIGRGALREA 343
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
+ + +GI V P P G + + N ++ + +++ +P G D
Sbjct: 344 VEREMDQEGIDVWVCPGAPGPAPEGIDDTGDPVMNLPWTHCGLPTMA------LPAGELD 397
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASL 441
P + +AR+G D LL + A+L
Sbjct: 398 GLPLGLQCVARYGEDESLLSWADGIAAAL 426
>gi|297623399|ref|YP_003704833.1| amidase [Truepera radiovictrix DSM 17093]
gi|297164579|gb|ADI14290.1| Amidase [Truepera radiovictrix DSM 17093]
Length = 437
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ DL D G VT G + A++ L GA +GKT + E
Sbjct: 66 PLQGVPLALKDLMDTRGEVTAAGA-KVLLERPPAAQDCPAAERLAAAGAVFLGKTTMTEL 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A+S G N H+ TP N PS++PGGSSSG+AVAVA+ L ++G DT G VR+P+AF
Sbjct: 125 AFSGLGLNPHFGTPPNARDPSRIPGGSSSGSAVAVASGLACAAIGSDTGGSVRIPAAFNN 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
++G + + GAV G +P+ST+LDT+G + + H+ L P A +PR +
Sbjct: 185 LVGLKTTDGAVPMAGCVPLSTTLDTLGPITKTVEDAWHLLRALTGRP-PAPFAPRSV 240
>gi|91783714|ref|YP_558920.1| Asp-tRNA Asn/Glu-tRNAGln amidotransferase A subunit [Burkholderia
xenovorans LB400]
gi|91687668|gb|ABE30868.1| Putative Asp-tRNA Asn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia xenovorans LB400]
Length = 374
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+G S A+ D DI GY T A T A R + VV L+ G +GKT + E A+
Sbjct: 13 SGPSIAIKDTIDIAGYPTTAASRALADT-PPARRHAQVVERLLAAGWHIVGKTNMHELAF 71
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N + TP NP +++PGGSSSG+A AV L D +LG DT G +R P+A CG++
Sbjct: 72 GMTGINDYTGTPQNPQDATRIPGGSSSGSAAAVGLKLADAALGTDTGGSIRGPAACCGVI 131
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
G +P++G VS +G+ P ++LD VG FARD ++L
Sbjct: 132 GLKPTFGRVSRLGVAPRESTLDCVGPFARDMRML 165
>gi|13475889|ref|NP_107459.1| allophanate hydrolase [Mesorhizobium loti MAFF303099]
gi|14026648|dbj|BAB53245.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mesorhizobium loti
MAFF303099]
Length = 619
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 13 GLGLAGILLMTKKLKKNIKQDFGAFIE---KLQLLPPPQPLPPKAP--HPLTGLSFAVSD 67
G+G+ G ++ T + D G FI K LL + L P P PL G+ FAV D
Sbjct: 18 GVGV-GDVIATIYARIEAADDPGIFIHLVSKANLLTAAEALGPFDPAAKPLWGIPFAVKD 76
Query: 68 LFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHY 127
D+ G T E+ +TVV+ L GA +GKT +D+FA + G Y
Sbjct: 77 NIDVAGMPTTAACAEYTYWPD---EDATVVARLKAAGALVVGKTNLDQFATGLVGVRTPY 133
Query: 128 DTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAV 187
P N +PGGSSSG+AVA A +V F+LG DT G R+P+ I+G +P+ GA+
Sbjct: 134 PIPRNAIDAELVPGGSSSGSAVATARGIVSFALGTDTAGSGRIPAGLNNIVGLKPTVGAL 193
Query: 188 SHMGIIPISTSLDTVGWFA 206
S G++P +LD V FA
Sbjct: 194 STGGVVPACRTLDCVSVFA 212
>gi|119952379|ref|YP_950124.1| amidase [Arthrobacter aurescens TC1]
gi|119951509|gb|ABM10419.1| putative Amidase [Arthrobacter aurescens TC1]
Length = 470
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 153/340 (45%), Gaps = 26/340 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ V D+ G +TG G +A + + VV++L GA IGKT EF
Sbjct: 80 PLHGVPVGVKDIISTAGLMTGMGSKHFA--GHVPNTDAAVVTSLRSAGAVIIGKTHAHEF 137
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G NP S++ GGSSSG+A AVAA L+ ++G DT G VR+P++ CG
Sbjct: 138 AYGPTGDIAVTGPALNPNDISRVTGGSSSGSAAAVAAGLLPIAIGTDTAGSVRIPASLCG 197
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKIL--------RHVGHVLLQLPFA 225
++G RP+ G VS G+ P+S +LD +G A D +L H G LP
Sbjct: 198 VVGMRPTSGTVSPAGVFPLSRTLDVIGPMAGSVTDTALLWRAMVSRPDHTGVTGPWLPLR 257
Query: 226 AQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHE-NLGEYFDSKVPSLK 284
SP Q P RV +V TE++ Q+ + + DS +++
Sbjct: 258 VPNSPTQ------------SPLLRVGEVKCALTERVSYHQIEALQIAVSALVDSGAVTVE 305
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKS 344
E V + IQ E H + +ES DP+I ++ E+S
Sbjct: 306 VPIPEVDECGRVHQAIQSAEAYALHQDRVESAPDLFDPEILRQLRAASEVSGWEYVLAMQ 365
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED 384
R+ +R + + L +LV PT P +G +E+ E+
Sbjct: 366 TRDRLREQVLAKLSSIDLLVMPTVPIEAPLIGQRELQGEN 405
>gi|238026507|ref|YP_002910738.1| amidase [Burkholderia glumae BGR1]
gi|237875701|gb|ACR28034.1| amidase [Burkholderia glumae BGR1]
Length = 458
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 90/152 (59%), Gaps = 6/152 (3%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +V DLFDI G VT G A+ + V+ L GA +G+T + EF
Sbjct: 73 PLAGIPVSVKDLFDIAGQVTRAGS-RALADAPPAAADAPAVARLRRAGAVLVGRTNMSEF 131
Query: 117 AYSINGTNKHYDTPTNP-----AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
A+S G N HY TP +P A +++ GGSSSGAAV+VA + +LG DT G +R+P
Sbjct: 132 AFSGLGLNPHYGTPRSPYRRAVAGDARVAGGSSSGAAVSVADGMAAAALGTDTGGSLRIP 191
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 203
+A CG+ GF+P+ V G +P+S++LD+ G
Sbjct: 192 AALCGLTGFKPTASRVPKDGGVPLSSTLDSFG 223
>gi|427813365|ref|ZP_18980429.1| putative amidase [Bordetella bronchiseptica 1289]
gi|410564365|emb|CCN21910.1| putative amidase [Bordetella bronchiseptica 1289]
Length = 461
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 51 PPKAPHPLTGLSFAVSDLFDIEGYV--TGFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
PP A PL G+ A D+F + G V G HP W A R +TV+ L G+ +
Sbjct: 53 PPPASLPLAGVGLAHKDIFVLPGRVPECGARHP-W---PDAPVRAATVIRRLAAAGSRPL 108
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
+ E A G N Y P NP GGSSSG+AVAVAA L SLG DT G V
Sbjct: 109 AALAMAEHASGATGENPRYPLPRNPLDADAAVGGSSSGSAVAVAAGLCYGSLGTDTAGSV 168
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
R+P+A CG++G P+ G + G+ P++ LDTVG AR
Sbjct: 169 RIPAATCGVVGLMPTRGLLPGDGVAPLAGELDTVGVLAR 207
>gi|358379648|gb|EHK17328.1| hypothetical protein TRIVIDRAFT_205920 [Trichoderma virens Gv29-8]
Length = 715
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 181/398 (45%), Gaps = 33/398 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D DI+G VT +A A+ T+ + L++ GA IGK +D+
Sbjct: 319 PLFGIPFAVKDNIDIKGVVTTVACDSFA---YTATATAPAIQHLLDAGAIYIGKLNLDQL 375
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P + + + GGSSSG+++AVAA LV F++G DT G VR P+AF G
Sbjct: 376 ATGLTGCRSPYGIPHSYYSKRHISGGSSSGSSIAVAAGLVSFAIGTDTAGSVRAPAAFSG 435
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL----PFAAQRSPRQ 232
++GF+P+ G +S G +P SLDT+G A R V +V+ Q P+A S
Sbjct: 436 VVGFKPTKGTISARGAVPACQSLDTLGILAPSLSDARQVWYVMDQHDHLDPYAKPPSSLP 495
Query: 233 IIIAD-----DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH 287
I D + IP D ++Q+ ++LF V K ++ G F
Sbjct: 496 TWIVDYRGFREGGFTFGIPPDSLLQMCSAKYQELFKVAVGKLQSCGGTLIDI--DYAPFA 553
Query: 288 KTNGELKNVMRLIQR-----YEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
K + N + +R YEF E I++ P + L+ E +
Sbjct: 554 KAGDLIYNASLVHERLASIGYEFI---VENIDTFHPTTKSIFQGVLSSNLKAWEVFRDQA 610
Query: 343 KSIR--NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ-NRAFSLLS-IASV 398
++ E R + L + +LV P+ + P +E+L + N L + A+V
Sbjct: 611 TQMQCIAEARRTFNKLEEGIDVLVVPSMPWHPTI---QEILDDPLALNSKLGLFTHPANV 667
Query: 399 SGCCQVTVPLGYYD----KCPTSVSFIARHGGDRFLLD 432
C V+V G+ D + P ++F+ G D +LD
Sbjct: 668 VDLCGVSVNAGWIDEEGIRLPFGITFLGDSGYDGKVLD 705
>gi|57233937|ref|YP_182046.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dehalococcoides
ethenogenes 195]
gi|109829686|sp|Q3Z6V3.1|GATA_DEHE1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|57224385|gb|AAW39442.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides
ethenogenes 195]
Length = 486
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 20/162 (12%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR---------TSTVVSTLVEGGAT 106
PLTG+ A+ D+ +G T + +SR + VV L E GA
Sbjct: 69 RPLTGIPMALKDVLCTKGIRT-----------TCSSRMLENFVPPYNAHVVDKLAEEGAV 117
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
+GKT +DEFA + N + T NP +++PGGSS G+A VAA FSLG DT G
Sbjct: 118 LLGKTNMDEFAMGSSTENSAFFTTHNPWNTAKVPGGSSGGSAACVAASEAVFSLGSDTGG 177
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+R P++FC + G +PSYG VS G++ ++SLD +G F +D
Sbjct: 178 SIRQPASFCSVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
>gi|221198966|ref|ZP_03572011.1| putative glutamyl-tRNA(Gln) amidotransferase, A subunit
[Burkholderia multivorans CGD2M]
gi|221205226|ref|ZP_03578242.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia
multivorans CGD2]
gi|221175017|gb|EEE07448.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia
multivorans CGD2]
gi|221181417|gb|EEE13819.1| putative glutamyl-tRNA(Gln) amidotransferase, A subunit
[Burkholderia multivorans CGD2M]
Length = 449
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 171/393 (43%), Gaps = 33/393 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V FD+ GY T G P R AA +++V LV+ GA + T +DEF
Sbjct: 73 PLAGVPFVVKSNFDVAGYATVAGSPTRLRA-PAARCDASMVDRLVQAGAVPVAATHMDEF 131
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A G N H+ PA S+M GGSSSG+A AVAA V +LG DT G +R P+A CG
Sbjct: 132 ACGATGVNPHFGAVRLPADASRMTGGSSSGSAAAVAAGHVPLALGSDTNGSIRAPAALCG 191
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-----QLPFAAQRSPR 231
+ +P++G +S G +P ++SLD G FA + L + L P +P
Sbjct: 192 VWAIKPTHGRLSMDGCVPYASSLDAAGGFAANLDDLCALYDALSCTSRDDAPIG--HAPL 249
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
++ + FE AD V+ ++ F +H+++ VP + +
Sbjct: 250 RVGVLTGEFERR---ADAQVRRAVERATACFA----QHDHV-----QAVPIDESVLE--- 294
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
++ RL+ +E H +++ + + I L I + + + R E ++
Sbjct: 295 PIRASARLVSNFEVARRHRALLDADASRVSAHLRERIRTGLAIGDAAYADALAHRAEWQA 354
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS-------LLSIASVSGCCQV 404
+++L + IL+ P T Y P+ + D A S +G V
Sbjct: 355 RLAALFERFDILIAPATPYVAPRFSDATV---DVNGEALDPKTTLGMFTQPISFAGLPVV 411
Query: 405 TVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
+ P + P V I R G +R L + +
Sbjct: 412 SAPCHAKGELPAGVQLIGRPGDERRCLAAARRL 444
>gi|333911434|ref|YP_004485167.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanotorris igneus
Kol 5]
gi|333752023|gb|AEF97102.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Methanotorris igneus
Kol 5]
Length = 432
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 196/429 (45%), Gaps = 52/429 (12%)
Query: 32 QDFGAFIE--KLQLLPPPQPLPPKAP---HPLTGLSFAVSDLFDIEGYVTGFGHPEWART 86
+D A+IE K ++L + L PL G AV +++GY T
Sbjct: 17 KDINAYIEVNKERVLKEAEELEKNEKLKDKPLYGKIIAVKANINVKGY-----------T 65
Query: 87 HSAASRT---------STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPS 137
S AS+T +TV+ L GA IG T +DEFA +G +Y NP A
Sbjct: 66 ISCASKTLENYIAPYDATVIKKLKANGALIIGMTNMDEFACGSSGETSYYGPTKNPKAED 125
Query: 138 QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPIST 197
++PGGSSSG+A AVAADL D +LG DT G +R P++ CG++GF+PSYG VS G+ ++
Sbjct: 126 RIPGGSSSGSAAAVAADLCDMALGSDTGGSIRNPASHCGVVGFKPSYGVVSRQGLCDLAM 185
Query: 198 SLDTVGWF---ARDPKILRHV-------GHVLLQLPFAAQRSPRQIIIADDCFELLKIPA 247
S D +G A D +L ++ ++ P + + E +++
Sbjct: 186 SFDQIGPITKNAEDALLLTNIIKGKDPSDSTTVETPKFEKEDISNYKVG-VVKEFMEVAD 244
Query: 248 DRVVQVVIKSTEKLFGRQVLKHENLG-EYFDSKVPSLKGFHKTN-GELKNVMRLI--QRY 303
D++ + K E +FG + L +Y D +P+ ++ N E + R +RY
Sbjct: 245 DKIRDKIEKGIE-VFGDLGCEIVELSYKYVDLALPT---YYLINYVEFFSATRKYDGRRY 300
Query: 304 EFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGIL 363
++ E ++ L I I E E S + RN MR + +LKD ++
Sbjct: 301 GYRIEEVCGEEVLRRIL---IGKHISEK-EYSGKYYKRALQARNVMRKEMMRILKDVDVI 356
Query: 364 VTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI-ASVSGCCQVTVPLGYYDKCPTSVSFIA 422
V PT P KLG K E Y A+ +L++ ++ G C VP G + P + A
Sbjct: 357 VGPTVPKLPHKLGEKLSPMEMY---AYDVLTVPTNICGICAGVVPCGDVNGIPVGLQIQA 413
Query: 423 RHGGDRFLL 431
+ D+ +L
Sbjct: 414 KPFEDQKVL 422
>gi|163759846|ref|ZP_02166930.1| Amidase [Hoeflea phototrophica DFL-43]
gi|162282804|gb|EDQ33091.1| Amidase [Hoeflea phototrophica DFL-43]
Length = 534
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G +A DLF EGY G A TSTV+ L G IG+ + E A
Sbjct: 135 LAGAPYARKDLFKREGYRAENG--ALIFKGQIADNTSTVIERLDAAGGIDIGRLAMAELA 192
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
S G N H P NP P+ + GGSSSG+AVAVAA V F+LG DT G +R P+A G+
Sbjct: 193 MSPTGFNAHTKHPRNPWNPAHVTGGSSSGSAVAVAAGYVRFALGTDTGGSIRHPAAMSGL 252
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
G +P+ VS G+ P+S SLD VG AR R G VL
Sbjct: 253 TGIKPTANRVSRAGVWPLSWSLDCVGPLARS---ARDCGLVL 291
>gi|425450214|ref|ZP_18830046.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 7941]
gi|389769070|emb|CCI05998.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 7941]
Length = 443
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 93/149 (62%), Gaps = 1/149 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDI+G VT G + R + A + + + TL GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDNPPARQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP PS++ GGSS G+A AVAA+LV +LG DT G VRVP+A CG+
Sbjct: 127 YGFVTENAHYRATPNPRDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+G +P++G VS G+ +SLD G+F+
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHPGFFS 215
>gi|307151358|ref|YP_003886742.1| AtzE family amidohydrolase [Cyanothece sp. PCC 7822]
gi|306981586|gb|ADN13467.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7822]
Length = 460
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDI G VT G A + A R +T ++ L + GA +G +DE+
Sbjct: 70 PLCGVPFAVKNLFDIAGVVTLAGSKINA-DNPPAIREATAITRLKQAGAILVGALNMDEY 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP ++ GGSS G+A AVA+ LV SLG DT G +RVP+A CG
Sbjct: 129 AYGFVTENSHYGATPNPLDRKRISGGSSGGSAAAVASHLVPISLGSDTNGSIRVPAALCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSPR- 231
+ G +P+YG +S G SLD +G FAR + L + +L + P QR P+
Sbjct: 189 VYGLKPTYGRLSRAGAFLFCASLDHIGAFARSVRDLATIFDLLQGEDPKDPVCTQRPPQP 248
Query: 232 ------------QIIIADDCF 240
+I IADD F
Sbjct: 249 CLPALYQGIEGLRIAIADDYF 269
>gi|221212089|ref|ZP_03585067.1| amidohydrolase, AtzE family [Burkholderia multivorans CGD1]
gi|221168174|gb|EEE00643.1| amidohydrolase, AtzE family [Burkholderia multivorans CGD1]
Length = 449
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 171/392 (43%), Gaps = 31/392 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V FD+ GY T G P R AA + +V LV+ GA + T +DEF
Sbjct: 73 PLAGVPFVVKSNFDVAGYATVAGSPTRLRA-PAARCDAAMVDRLVQAGAVPVAATHMDEF 131
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A G N H+ PA PS+M GGSSSG+A AVAA V +LG DT G +R P+A CG
Sbjct: 132 ACGATGVNPHFGAVRLPADPSRMTGGSSSGSAAAVAAGHVPLALGSDTNGSIRAPAALCG 191
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL---LQLPFAAQRSPRQI 233
+ +P++G +S G +P ++SLD G FA + L + L + A P ++
Sbjct: 192 VWAIKPTHGRLSVDGCVPYASSLDVAGGFAANLDDLCALYDALSGTSRDDSPAGHVPLRV 251
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGFHKTNGE 292
+ FE AD V+ ++ F +H+++ E D V
Sbjct: 252 GVLTGEFERR---ADAQVRRAVERATACFA----QHDHVRAEPIDESVLE---------P 295
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
++ RL+ +E H +++ + + I L I + + + R E ++
Sbjct: 296 IRASARLVSNFEVARRHRALLDADASHVSAHLRERIRTGLAIDDAAYADALAHRAEWQAR 355
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS-------LLSIASVSGCCQVT 405
+ +L + IL+ P T Y P+ + D A S +G V+
Sbjct: 356 LCALFERFDILIAPATPYVAPRFSDATV---DVNGEALDPKTTLGMFTQPISFAGFPVVS 412
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
P + PT V I R G +R LD + +
Sbjct: 413 APCHAKGELPTGVQLIGRPGDERRCLDAARRL 444
>gi|86751165|ref|YP_487661.1| allophanate hydrolase [Rhodopseudomonas palustris HaA2]
gi|86574193|gb|ABD08750.1| Amidase [Rhodopseudomonas palustris HaA2]
Length = 599
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D+ G T P +A + + ST V+ L GA IGKT +D+F
Sbjct: 63 PLYGVPVAVKDNIDVAGLPTTAACPAFAYQPA---QDSTAVAKLRAAGAIIIGKTNLDQF 119
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N +PGGSSSG+AVAV A LV SLG DT G RVP+
Sbjct: 120 ATGLVGVRSPYGIPRNAMRADLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLNN 179
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G +S G++P +LD + FA
Sbjct: 180 IVGLKPSLGLISTTGLVPACRTLDCISVFA 209
>gi|398808835|ref|ZP_10567693.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
gi|398086844|gb|EJL77451.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
Length = 469
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G++ AV DLFDIEG+ T G AR T+T V L + GA +GKT EF
Sbjct: 75 PLHGVTVAVKDLFDIEGWPTSAG--SVARPPRIGEVTATAVHRLRQAGAVVLGKTHTVEF 132
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+ GTN TP NP ++PGGSSSG+AVAVAA + ++G DT G VR+P+
Sbjct: 133 AFGGWGTNAVMGTPWNPWDLTTRRVPGGSSSGSAVAVAAGMACAAIGTDTGGSVRIPAGL 192
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
CG++G + ++G VS G++ + + DTVG RD
Sbjct: 193 CGVVGLKTTHGMVSRHGLVELCPTHDTVGPITRD 226
>gi|192290050|ref|YP_001990655.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
gi|192283799|gb|ACF00180.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
Length = 601
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV D D+ G T P +A + +T V+ L GA IGKT +D+F
Sbjct: 65 PLYGVPVAVKDNIDVAGLTTTAACPAFAYQPA---HDATAVAKLRAAGAIVIGKTNLDQF 121
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N +PGGSSSG+AVAV A LV SLG DT G RVP+
Sbjct: 122 ATGLVGVRSPYGVPRNAMRSDLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLNN 181
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +PS G +S G++P +LD V FA
Sbjct: 182 IVGLKPSLGMISTTGVVPACRTLDCVSIFA 211
>gi|456352215|dbj|BAM86660.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A [Agromonas
oligotrophica S58]
Length = 466
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFD+EG T G + R A+R +T+++ + GA +G + E+
Sbjct: 65 PLAGVPFAVKNLFDVEGLPTRAGS-KINRDRPPAARDATLIARMETAGAVLVGALNMGEY 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP P++M GGSS G+ AV LV +LG DT G +RVPS+FCG
Sbjct: 124 AYDFTGENVHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPLALGSDTNGSIRVPSSFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
I G +P+YG +S P SLD +G FAR
Sbjct: 184 IFGLKPTYGRLSRARSFPFVASLDHLGPFAR 214
>gi|378578474|ref|ZP_09827149.1| amidase [Pantoea stewartii subsp. stewartii DC283]
gi|377818754|gb|EHU01835.1| amidase [Pantoea stewartii subsp. stewartii DC283]
Length = 466
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 168/388 (43%), Gaps = 46/388 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +AV +LFD++GY T G R A+R + ++ L + GA G +D +
Sbjct: 70 PLAGIPYAVKNLFDVQGYTTLAGA-RLFRQRPTATRDAFAITQLQQAGALLSGMVNMDAY 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP +++ GGSS G+A AVAA LV FSLG DT G +RVP++ CG
Sbjct: 129 AYGFTTENTHYGATHNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P++G +S G P SLD +G FAR L V +L Q +
Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVDDLALVYDLL------------QGHDS 236
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF------DSKVPSLKGFHKTN 290
D F+ ADR + + + G Q L+ LG +F D++ L+
Sbjct: 237 TDAFQ-----ADRPLAATLPQLKN--GAQDLRCAVLGGFFSTWCNDDARAAQLQVAQALQ 289
Query: 291 GELKNVM---RLIQRYEFKNNHNEWIESVKPAL--DPDI----SAE---IGEMLEISETV 338
+ V+ L + F +E PAL PD+ S E G ML + V
Sbjct: 290 AQDDVVIAEAELARSAAFIMTASEGGNHYLPALRQQPDLFEPHSRERLLAGAMLPAAWYV 349
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS-----LL 393
+ R + + L +L+ P T P L G+E ++ + QN L
Sbjct: 350 --QAQRFRRHFQQQVVPLFAQYDVLIAPATPCSAP-LIGQETIAINGQNLPTKASMGMLT 406
Query: 394 SIASVSGCCQVTVPLGYYDKCPTSVSFI 421
S G TVP+ P V I
Sbjct: 407 QPISFLGLPVCTVPMTTASGLPIGVQLI 434
>gi|383815991|ref|ZP_09971396.1| amidase [Serratia sp. M24T3]
gi|383295159|gb|EIC83488.1| amidase [Serratia sp. M24T3]
Length = 456
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 171/401 (42%), Gaps = 25/401 (6%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
KA P+ G+ ++ DLFD++G T G AA+ + +V+ L+ GA IGKT
Sbjct: 68 KALSPIDGVPISIKDLFDVQGEAT-TGGSRVLADAPAAAAHAEIVTRLLAAGAVIIGKTN 126
Query: 113 VDEFAYSINGTNKHYDTPTNP-AAPSQMPGGSSSGAAVAVAADLVDF-SLGIDTVGGVRV 170
+ EFAYS G N HY TP NP S+ G SS A +D + F ++G DT G VR+
Sbjct: 127 MTEFAYSGLGINPHYGTPANPWDRESRRIPGGSSSGAAVSVSDAMSFGAVGSDTGGSVRI 186
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP 230
P+AFCG+ GF+P+ +S G++P+S SLD+VG A D V L + Q P
Sbjct: 187 PAAFCGLTGFKPTARRISMAGVLPLSASLDSVGTIAHD-----VASCVALDAAISGQ--P 239
Query: 231 RQIIIADDCFELLKIPADRVVQVVIK--STEKLFGRQVLKHEN--LGEYFDSKVPSLKGF 286
+ + D IP V+ + + S+ LK + E ++ L
Sbjct: 240 LSLTVKDLAAAHFAIPQTLVLDGLDEQVSSAFAAAIAALKQAGAKISEIPLGEISELASI 299
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
+ T G ++ + + H I + DP + + I + E R
Sbjct: 300 NATGG-----FTALESWAW---HKPLIAARADGYDPRVVSRIRRGEPLGEKDRVQLVQQR 351
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDY---QNRAFSLLSIASVSGCCQ 403
+ + ISS ++ L+ PT + P + E E Y A S+ + C
Sbjct: 352 ADWQQRISSKVQQYDALLMPTVPFIAPTIAELEADEETYFRVNGAALRNPSVINFLDGCA 411
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
V++P P + A D L+ Q + L+ Q
Sbjct: 412 VSLPCQKSGAAPVGLMVAALPMQDEALMSWAQEIERCLKSQ 452
>gi|15897667|ref|NP_342272.1| glutamyl-tRNA amidotransferase subunit A [Sulfolobus solfataricus
P2]
gi|284174992|ref|ZP_06388961.1| glutamyl-tRNA amidotransferase, subunit A (gatA-1) [Sulfolobus
solfataricus 98/2]
gi|384434281|ref|YP_005643639.1| amidase [Sulfolobus solfataricus 98/2]
gi|6015711|emb|CAB57538.1| glutamyl-tRNA amidotransferase, subunit A [Sulfolobus solfataricus
P2]
gi|13813938|gb|AAK41062.1| Glutamyl-tRNA amidotransferase, subunit A (gatA-1) [Sulfolobus
solfataricus P2]
gi|261602435|gb|ACX92038.1| Amidase [Sulfolobus solfataricus 98/2]
Length = 398
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 32/333 (9%)
Query: 92 RTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAV 151
R + VV ++ G IGKT EFA T+ NP P ++ GGSS G+AVAV
Sbjct: 60 RNAYVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVDPERISGGSSGGSAVAV 119
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDP-K 210
D+VD +G DT G VR+PS+ CG++GF+P+ G + + G+IP S SLDTVG +D +
Sbjct: 120 KLDMVDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPNDGVIPFSWSLDTVGIIVKDNIR 179
Query: 211 ILRHVGHVLL-----QLPFAAQRS-PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGR 264
+LR V V+L ++ A R+ PR + D E V ++++K
Sbjct: 180 LLRRVFDVVLPNEKRKVEIAKLRTRPRLGLFLFDDME--------VSRILLKDI------ 225
Query: 265 QVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDI 324
+ L +FD L + + + R I E + H +WI D
Sbjct: 226 ----YAKLSSHFDIVEVDLPLLRQYGSKTR---RTISLAEAASYHKDWISEYSDKYFKDT 278
Query: 325 SAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED 384
+ + ++IS T + R + + K+ +++PTT P++ +++S
Sbjct: 279 YTLLLDGMKISATDYIDALRHRRVLIEEYVKVFKNIDFILSPTTKIVAPRIS--DVISNP 336
Query: 385 YQNRAFSLLS--IASVSGCCQVTVPLGYYDKCP 415
Q R + + + + +V G ++VP + P
Sbjct: 337 LQFREYLIANTELFNVVGAPSISVPFSTLNDLP 369
>gi|398833070|ref|ZP_10591211.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit,
partial [Herbaspirillum sp. YR522]
gi|398222149|gb|EJN08535.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit,
partial [Herbaspirillum sp. YR522]
Length = 134
Score = 107 bits (266), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/84 (58%), Positives = 60/84 (71%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+FA DLFDI G TG G+P+W RTH+ A+ TS VV L+ GAT +GKT+ DE
Sbjct: 37 PLAGLTFAAKDLFDICGRTTGAGNPDWLRTHAPATATSPVVEALLAAGATLVGKTLTDEL 96
Query: 117 AYSINGTNKHYDTPTNPAAPSQMP 140
AYSI+G N HY TP N AAP ++P
Sbjct: 97 AYSIHGDNHHYGTPLNSAAPQRVP 120
>gi|393770975|ref|ZP_10359451.1| amidase [Novosphingobium sp. Rr 2-17]
gi|392723631|gb|EIZ81020.1| amidase [Novosphingobium sp. Rr 2-17]
Length = 446
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 3/166 (1%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSA-ASRTSTVVSTLVEGGATCIGKTVV 113
P PL G+ F VSD FD+ G +T G R H+ ASR + ++ L GA IG +
Sbjct: 65 PGPLAGVPFGVSDQFDVSGEITTVG--SRTRLHAPFASRDARAIALLEAAGAVLIGTQTM 122
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DE+ Y TN H+ T NP +++ GG++ G+AVAVA V FSL +DT G VRVP+A
Sbjct: 123 DEYNYGFTATNAHFGTVRNPHDQARLAGGAAGGSAVAVATGTVAFSLAVDTNGSVRVPAA 182
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
G++G +P+YG + G P SLD G ARD L V +L
Sbjct: 183 LSGVIGLKPTYGDLPRQGCYPFVESLDVPGVLARDVDDLALVRDIL 228
>gi|349687022|ref|ZP_08898164.1| amidase [Gluconacetobacter oboediens 174Bp2]
Length = 457
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 161/387 (41%), Gaps = 40/387 (10%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+ P PL G+ F V DLFD+ G VT G R + A+R + VV L GA +
Sbjct: 69 RDPGPLAGVPFGVKDLFDVRGEVTTAGSIVL-RDNLPATRDAEVVERLRAAGAVPVATLN 127
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DEFAY + N H T NP P+++ GGSS G+A +VAA L+ F+LG DT G +RVPS
Sbjct: 128 MDEFAYGFSTENAHTGTTRNPHDPARLAGGSSGGSAASVAAGLLPFTLGSDTNGSIRVPS 187
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
+ CG+ G +P+YG + G+ P SLD VG A + LR V ++
Sbjct: 188 SLCGVWGLKPTYGQMPLRGVYPFVASLDVVGPMADTVEDLRAVYGIMAG----------- 236
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
L + V V + F + L D + L H E
Sbjct: 237 ---------GLHMGEPDVGDVRVARLGGWFAENI--SPELAAGIDRVMAHLG--HDRVIE 283
Query: 293 LKNVMR------LIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKS 344
L V R LI E N H + DP + G ML + V +
Sbjct: 284 LPEVARARASAFLISAAEGGNLHLPRLRRRAMQYDPATRGRLMAGAMLPAATFV--QAQR 341
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI----ASVSG 400
R R + + L + +LV PTT P++ + A + L I S++G
Sbjct: 342 FRRWFRGHVHAALANADVLVAPTTVGVAPRIDQPSITVNGRTVSARANLGIFTQPISLAG 401
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGD 427
+ PL D P + I GG+
Sbjct: 402 LPVLAAPLA-VDGLPQGIQLIGAPGGE 427
>gi|398956909|ref|ZP_10677027.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM33]
gi|398149211|gb|EJM37865.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM33]
Length = 374
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G A+ D DI G+ T G +A AA++ + VV +++ G +GKT + E A+
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFADA-PAATKNAEVVDAILDAGWQIVGKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N TP NP AP ++PGGSSSG+A AVAA L D ++G DT G VRVP+A CGI G
Sbjct: 73 VTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+P+YG VS +G P+ +SLD VG FAR
Sbjct: 133 LKPTYGRVSRIGAHPLESSLDCVGPFAR 160
>gi|320334835|ref|YP_004171546.1| amidase [Deinococcus maricopensis DSM 21211]
gi|319756124|gb|ADV67881.1| Amidase [Deinococcus maricopensis DSM 21211]
Length = 388
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
Query: 34 FGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT 93
FGA+ + P PL PL L+F+ DL+ + G+ G +R A
Sbjct: 6 FGAWAYR-----PATPLRGAPGGPLADLTFSAKDLYGVPGWPLGGS----SRAALPAVAP 56
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
S +V+ L GAT +GKT + E A + G N T NP +++ GGSSSGAAV+VA
Sbjct: 57 SPLVAHLRALGATLVGKTHLHEVALGVTGANAFGGT-RNPLDATRVAGGSSSGAAVSVAT 115
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYG--AVSHMGIIPISTSLDTVGWFARDPKI 211
VDF+LG DT G +RVP+A+CG++GF+P+ G A G++P+S + D G ARD ++
Sbjct: 116 GEVDFALGTDTGGSIRVPAAWCGVVGFKPTKGHAAWPTDGVLPLSLTCDHAGPLARDVQV 175
Query: 212 LRHV 215
+ V
Sbjct: 176 VARV 179
>gi|357026914|ref|ZP_09089006.1| allophanate hydrolase [Mesorhizobium amorphae CCNWGS0123]
gi|355541294|gb|EHH10478.1| allophanate hydrolase [Mesorhizobium amorphae CCNWGS0123]
Length = 607
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 102/198 (51%), Gaps = 9/198 (4%)
Query: 15 GLA-GILLMTKKLKKNIKQDFGAFIE---KLQLLPPPQPLPPKAP--HPLTGLSFAVSDL 68
GLA G ++ T + D G FI K LL + L P P PL G+ FAV D
Sbjct: 18 GLAVGDVIATIYTRIEAADDPGIFIHLAPKEDLLAAAETLGPFDPVARPLWGIPFAVKDN 77
Query: 69 FDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYD 128
D+ G T E+ + +TVV+ L GA +GKT +D+FA + G +
Sbjct: 78 IDVAGMPTTAACAEYTYRPD---KDATVVARLKAAGALVVGKTNLDQFATGLVGVRTPWP 134
Query: 129 TPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVS 188
P N +PGGSSSG+AVA A +V F+LG DT G R+P+ I+G +P+ GA+S
Sbjct: 135 IPRNAIDAELVPGGSSSGSAVATARGIVSFALGTDTAGSGRIPAGLNNIVGLKPTVGALS 194
Query: 189 HMGIIPISTSLDTVGWFA 206
G++P +LD V FA
Sbjct: 195 AAGVVPACRTLDCVSVFA 212
>gi|403050049|ref|ZP_10904533.1| hypothetical protein AberL1_00550 [Acinetobacter bereziniae LMG
1003]
Length = 448
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 53 KAPHPLT---GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
KA PL+ G+ A DLFD++G VT G H+ A + + V L G +G
Sbjct: 57 KAHAPLSLFDGVPIAWKDLFDVQGTVTTAGSKTRVH-HAVAQQDADGVMQLTRMGMVNLG 115
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
KT + EFAYS G N H+ TP N P +PGGSSSGAA +V +V S+G DT G +R
Sbjct: 116 KTNLTEFAYSGLGLNPHFGTPKNVVDPRCIPGGSSSGAATSVGQKIVPISMGTDTAGSIR 175
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRH--VGHVLLQLPF 224
+P++F G++G+R S S G+ P++ SLD+VG + RD +L +G + +P
Sbjct: 176 IPASFNGLVGYRSSSSRYSKKGVFPLAASLDSVGPISRSVRDCIVLDQLMLGQIQSNIPS 235
Query: 225 AAQRSPRQIIIADDCF 240
Q QI + D
Sbjct: 236 QPQSRKMQIYVDLDML 251
>gi|83644408|ref|YP_432843.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A-like protein
[Hahella chejuensis KCTC 2396]
gi|83632451|gb|ABC28418.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidases [Hahella chejuensis KCTC 2396]
Length = 436
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 173/384 (45%), Gaps = 45/384 (11%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L+GL V D+FD + T + P + R H SR +VV+ L + GA +GKT EFA
Sbjct: 68 LSGLPIGVKDIFDTVDFATEYFSPIY-RNHRP-SRDCSVVARLRQEGAIVMGKTETTEFA 125
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ G + NP A PG SS+G+A +AA +LG T G + P+++CG+
Sbjct: 126 FMHTGPTR------NPHAMDHTPGSSSAGSAAGLAAGFFPVALGSQTAGSLLKPASYCGL 179
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
F+P+ G VS G+ P++ S DTVGW+ R LR + VLL+ + Q SP +
Sbjct: 180 FAFKPTRGIVSLEGVKPLAPSFDTVGWYGRSMNDLRLLAEVLLEPYISLQTSPVTRPLRL 239
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSK-----VPSLKGFHKTNGE 292
C D V S ++ F +L + G + ++ + L HK +
Sbjct: 240 ACV------IDEFWPTVETSVKESFLTSLLTLRSQGHHIENTSTPFGLRQLAESHKIVND 293
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE--ISETVIEN--CKSIRNE 348
+ L YE+ + ++ +SA EM+E + T +E K+ N
Sbjct: 294 REGSRALA--YEYASRRSQ------------LSASTLEMIENGLRLTFVEELAAKTTINA 339
Query: 349 MRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPL 408
+A + D ++T +T + P + +L+ + L+ + + G Q+ +PL
Sbjct: 340 AANAYPQFMADYDAIITLSTPHSAP----EGLLTTGTSD----LIKVWNALGVPQLNIPL 391
Query: 409 GYYDKCPTSVSFIARHGGDRFLLD 432
+ P + + GGD +LL+
Sbjct: 392 TLPGRLPVGLQIVGIQGGDGWLLE 415
>gi|423017507|ref|ZP_17008228.1| amidase [Achromobacter xylosoxidans AXX-A]
gi|338779452|gb|EGP43893.1| amidase [Achromobacter xylosoxidans AXX-A]
Length = 448
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 166/385 (43%), Gaps = 28/385 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWART-HSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
+ GL ++ DLFDIEG T G AR AA + VV L+ GA IG+T + EF
Sbjct: 69 IEGLPISIKDLFDIEGETTMAGSV--AREGEPAADANAEVVQRLIAAGAVIIGRTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N HY TP NP A ++PGGSSSGAAV+V+ + ++G DT G VR+P+A
Sbjct: 127 AYSGLGINPHYGTPLNPWDRATGRIPGGSSSGAAVSVSDGMAVAAIGSDTGGSVRIPAAL 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ GF+PS VS G++P+S +LD++G A + + +L + + P
Sbjct: 187 CGLTGFKPSAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAIL-----SGEGGP---- 237
Query: 235 IADDCFEL----LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGFHKT 289
D L L +P + + K F R V + G D +P
Sbjct: 238 -VPDALPLRGLRLAVPKTLALDAMDKHVSDTFARTVARLVAAGALVDEIAIPEFAELAGI 296
Query: 290 NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
N K + + + H + I DP + + I ++ + R
Sbjct: 297 NA--KGGFTAAEAWAW---HRDLIARAGKRYDPRVVSRIMRGKDMGAADYLDLLDAREAW 351
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL---SIASVSGCCQVTV 406
+A+ + L+ PTT P + E Y +L ++ + C +++
Sbjct: 352 VAAVDRRIAGYDALILPTTPIVAPAVADLTASDEAYYAANGLILRNPTLINFLDGCALSL 411
Query: 407 PLGYYDKCPTSVSFIARHGGDRFLL 431
P P + +G DR +L
Sbjct: 412 PCHAAGSAPVGLMIAGSNGADRRIL 436
>gi|218529262|ref|YP_002420078.1| allophanate hydrolase [Methylobacterium extorquens CM4]
gi|218521565|gb|ACK82150.1| allophanate hydrolase [Methylobacterium extorquens CM4]
Length = 625
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ G T ++A S T+ V+ L+ GA IGKT +D+F
Sbjct: 74 PLWGVPFAVKDNLDVAGLPTTAACADFAFV---PSETAPCVARLLAAGAILIGKTNLDQF 130
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G + P N +PGGSSSG+AVAVA LV F+LG DT G RVP+
Sbjct: 131 ATGLVGLRTPHPAPRNALNADLVPGGSSSGSAVAVAHGLVAFALGTDTAGSGRVPAGLNN 190
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
++G +PS G+VS G++P +LDTV FA
Sbjct: 191 VVGLKPSLGSVSSRGLLPACRTLDTVSVFA 220
>gi|427719801|ref|YP_007067795.1| amidohydrolase, AtzE family [Calothrix sp. PCC 7507]
gi|427352237|gb|AFY34961.1| amidohydrolase, AtzE family [Calothrix sp. PCC 7507]
Length = 460
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 183/408 (44%), Gaps = 28/408 (6%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ FAV +LFDI G T G A + A+ +T V+ L + GA +G +D
Sbjct: 64 PGVLAGVPFAVKNLFDIAGLTTLAGSKINAE-NPPATEDATAVAKLKQAGAVLVGALNMD 122
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP ++ GGSS G+A AVAA LV +LG DT G +RVP+A
Sbjct: 123 EYAYGFVTENSHYGATHNPHDLQRVAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPAAL 182
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQRSP 230
CG+LG +P+YG +S G+ STS D +G FAR + + V +L + P +R P
Sbjct: 183 CGVLGLKPTYGRLSRAGVALFSTSFDHIGPFARSVRDIAMVFDLLQGEDEKDPVCTKRPP 242
Query: 231 RQII--IADDCFEL-LKIPADRVVQVVIKSTEKLFG-RQVLKHENLGEYFDSKVPSLKGF 286
++ + D + + I D VQ + E L QV + ++ EY K+P
Sbjct: 243 ELVLSQLHQDISGIKIAIAGDYFVQGA--APEALAAVEQVARALDVTEYV--KIPEA--- 295
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
H+ + +I E N H E ++S D I + R
Sbjct: 296 HRA----RAAAFVITASEGANLHLEKLKSRPQDFDAATRDRFLAGALIPSQWYLQAQRFR 351
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRAFSLLSIASVS--GCC 402
I + ++ +++ PTT P +G + M+ E+ R L +S G
Sbjct: 352 RWYSDRIREIFQNVDVILAPTTPITAPLIGQQTMILDGEEILVRPHLGLFTQPLSFIGLP 411
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATK 450
++VP+ + P V IA + +L + A L+ Q I+ K
Sbjct: 412 VLSVPIQRPNSLPLGVQLIAAPHNEALIL----RVAAVLESQGVISAK 455
>gi|13472921|ref|NP_104488.1| amidase [Mesorhizobium loti MAFF303099]
gi|14023668|dbj|BAB50274.1| Glu-tRNA amidotransferase [Mesorhizobium loti MAFF303099]
Length = 431
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 172/393 (43%), Gaps = 43/393 (10%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ ++ DLFD+ VT G +T + A R + +VS L + GA IGKT + EF
Sbjct: 52 PLDGVIVSIKDLFDVASEVTTAGS-LMRKTAAPAMRDAAIVSRLRQAGAVIIGKTNMTEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N HY TP N S++PGGSSSGA V+V D S+G DT G +R+P++
Sbjct: 111 AFTAIGDNMHYGTPGNAIDASRIPGGSSSGAGVSVGEGTSDISIGSDTGGSIRIPASLNS 170
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR--------DPKILRHVGHVLLQLPFAAQR 228
++GF+P+ V +G P+S +LD++G AR D + L + A R
Sbjct: 171 VVGFKPTARRVPLIGAFPLSGTLDSIGPLARTVAQCAATDAVMAGEAPAELAAISLAGLR 230
Query: 229 --SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEY-FDSKVPSLKG 285
PR ++ D E V + E G+ + + D + +
Sbjct: 231 VGVPRGVLFGDTEGE------------VAAAFEHCLGKIEQAGARMADLVIDDMIAEFRT 278
Query: 286 FHKTNGELKNVMRLIQRYEFKNNHNEWIES-VKPALDPDISAEIGEMLEISETVIENCKS 344
K I E H +W+ + +DP +S + + V
Sbjct: 279 ATKRGS--------IAAMEGAEVHADWLATGASVPVDPHVSGPLSRAAMLPVPVYIRVLR 330
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAF--SLL----SIASV 398
R+ + +A+ L +L PTT P + L+ED + R LL +A+
Sbjct: 331 RRSALIAAMDDRLASVDVLALPTTPVTAPTI---VSLAEDAELRDHVEGLLLRNTQVANQ 387
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
C +++P+ P + +AR+G DR LL
Sbjct: 388 FDLCAISLPMPDM-ALPAGLMLVARNGHDRRLL 419
>gi|229579162|ref|YP_002837560.1| amidase [Sulfolobus islandicus Y.G.57.14]
gi|229582083|ref|YP_002840482.1| amidase [Sulfolobus islandicus Y.N.15.51]
gi|228009876|gb|ACP45638.1| Amidase [Sulfolobus islandicus Y.G.57.14]
gi|228012799|gb|ACP48560.1| Amidase [Sulfolobus islandicus Y.N.15.51]
Length = 397
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 169/390 (43%), Gaps = 40/390 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L ++F + D+ +G T G + + + VV ++ G IGKT EFA
Sbjct: 27 LKDVTFGIKDVILTKGIRTTAG--SRILENYVPQKNAYVVDAILREGGKIIGKTNTHEFA 84
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
T+ NP P ++ GGSS G+AVAV D++D +G DT G VR+PS+ CG+
Sbjct: 85 LGATNTSSIGGPARNPVNPERISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGV 144
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDP-KILRHVGHVLL-----QLPFAAQRS-P 230
+GF+P+ G + G+IP S SLDTVG +D +LR V +L ++ A R+ P
Sbjct: 145 IGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLRRVFDAILPNEKKKVEIAKLRTRP 204
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD---SKVPSLKGFH 287
R + D E+ +I + + L YFD +P L+ +
Sbjct: 205 RLGLFLFDEMEVSRILLKEI------------------YAKLSSYFDIVEVDLPLLRQYG 246
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
R I E + H +WI D + + ++IS T + R
Sbjct: 247 ------SKTRRTISLAEASSYHKDWITENSNKYFKDTYTLLLDGMKISATDYIDAIRYRR 300
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS--IASVSGCCQVT 405
+ + K+ +++PTT PK+ ++LS Q R + + + + +V G ++
Sbjct: 301 VLIEEYIKVFKNIDFILSPTTKIVAPKIS--DVLSNPLQFREYLIANTELFNVVGAPSIS 358
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
+P ++ P + D LL+ +
Sbjct: 359 IPFSTLNELPVGLMISGELYKDGDLLEVTE 388
>gi|52841963|ref|YP_095762.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378777597|ref|YP_005186035.1| glutamyl/tRNA (Gln) amidotransferase, A subunit [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|81603310|sp|Q5ZUQ7.1|GATA_LEGPH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|52629074|gb|AAU27815.1| glutamyl/tRNA (Gln) amidotransferase, A subunit [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508412|gb|AEW51936.1| glutamyl/tRNA (Gln) amidotransferase, A subunit [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 483
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 184/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++ GGSS G+A AVA +LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVSGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCMAGFDSKDSTSVDRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGE---YFD 277
D +K P D++ +Q I KLF ENLG D
Sbjct: 242 PDYSAEIKNPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLF-------ENLGAEIIEID 294
Query: 278 SKVPSL---------KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
K+ L +N + +R R + + IE + + E+
Sbjct: 295 LKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + + L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ + QN + ++A+ ++G V++P G+ +K P + +++H + LL
Sbjct: 410 KIDDPIQNYLADVFTVAANLAGLPAVSIPTGFENKLPIGLQLMSKHFSENRLL 462
>gi|404330329|ref|ZP_10970777.1| allophanate hydrolase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 594
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P HPL G+ FA+ D D+ G T G P++A S +TVV L+ GA +GK
Sbjct: 67 PLESHPLWGIPFAIKDNIDLAGVKTTAGCPDFAYL---PSEHATVVGNLIRAGAIPVGKA 123
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+D+FA + GT Y N + GGSS+G+AVAVA F+LG DT G RVP
Sbjct: 124 NLDQFATGLVGTRSPYGEVHNALKDELISGGSSAGSAVAVARGQAAFALGTDTAGSGRVP 183
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+A ++GF+ S GA S G++P SLD + FA
Sbjct: 184 AALNHLIGFKSSIGAWSTRGLVPACASLDCITVFAH 219
>gi|170690775|ref|ZP_02881941.1| Amidase [Burkholderia graminis C4D1M]
gi|170144024|gb|EDT12186.1| Amidase [Burkholderia graminis C4D1M]
Length = 378
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 101/180 (56%), Gaps = 10/180 (5%)
Query: 36 AFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTST 95
AF+++ L+ P+ P + A+ D DI GY T A T ASR +
Sbjct: 3 AFLQQFDLVAQPRANAP---------TIAIKDSIDIAGYPTTAASRALADT-PPASRHAE 52
Query: 96 VVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADL 155
VV L++ G GKT + E A+ + G N TP NP +++PGGSSSG+A AV L
Sbjct: 53 VVQRLLDAGWRITGKTNMHELAFGMTGINDFSGTPRNPQDMARIPGGSSSGSASAVGLGL 112
Query: 156 VDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV 215
VD +LG DT G VR P+A CG++G +P++G VS G+ P T+LD VG FARD K + V
Sbjct: 113 VDAALGTDTGGSVRGPAACCGVIGLKPTFGRVSREGVSPRVTTLDCVGPFARDMKTIIDV 172
>gi|163846950|ref|YP_001634994.1| amidase [Chloroflexus aurantiacus J-10-fl]
gi|222524774|ref|YP_002569245.1| amidase [Chloroflexus sp. Y-400-fl]
gi|163668239|gb|ABY34605.1| Amidase [Chloroflexus aurantiacus J-10-fl]
gi|222448653|gb|ACM52919.1| Amidase [Chloroflexus sp. Y-400-fl]
Length = 528
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV DLFD+ GY T G R AS STVV+ L GA IGKT + EF
Sbjct: 144 PLHGVPIAVKDLFDVAGYPTAAG--SRIRAGVMASSDSTVVARLRAAGAIIIGKTRMSEF 201
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AYS N HY NP P + GGSSSG+AVAV+ + ++G DT G +R+P+A CG
Sbjct: 202 AYSPGSNNAHYGPTANPYHPERDSGGSSSGSAVAVSTVMAYAAIGTDTGGSIRIPAAHCG 261
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
I+G +P++G VS G P+S SLD G AR
Sbjct: 262 IVGLKPTHGRVSLAGGFPLSWSLDHAGPLAR 292
>gi|440683839|ref|YP_007158634.1| amidohydrolase, AtzE family [Anabaena cylindrica PCC 7122]
gi|428680958|gb|AFZ59724.1| amidohydrolase, AtzE family [Anabaena cylindrica PCC 7122]
Length = 458
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 182/400 (45%), Gaps = 52/400 (13%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDI G T G A + A+ +T ++ L + GA +G +DE+A
Sbjct: 67 LCGVPFAVKNLFDIAGLTTLAGSKINAE-NPPATEDATAITRLKKSGAVLVGALNMDEYA 125
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY T NP ++ GGSS G+A AVA LV +LG DT G +RVP+A CG+
Sbjct: 126 YGFVTENAHYGTTHNPHDLQRVAGGSSGGSAAAVAGGLVPLTLGSDTNGSIRVPAALCGV 185
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL----QLPFAAQR----- 228
GF+P+YG +S G+ S+SLD +G FA + + + VL + P +R
Sbjct: 186 FGFKPTYGRLSRAGVKLFSSSLDHIGHFATSVRDIATIFDVLQGEDGKDPICTKRPAERS 245
Query: 229 --------SPRQIIIADDCFELLKIP-ADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSK 279
S +I IADD F P A VQ V K+ + ++ N+ E ++
Sbjct: 246 LLQINNDISHLRIAIADDYFTQNSTPEALAAVQKVAKAL------NITQYVNIPEADIAR 299
Query: 280 VPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAE----IGEMLEIS 335
+ +I E N H E ++S +P D D++ G ++ S
Sbjct: 300 AAAF---------------VITACEGANLHLEKLKS-RPQ-DFDVATRDRFLAGALIPGS 342
Query: 336 ETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRAFSLL 393
+ + R R I + ++ I++ PTT P +G + M+ SE+ R L
Sbjct: 343 WYI--QAQRFRRWYRDQIREIFQNLDIIIAPTTPITSPLIGQQTMILDSEEILVRPHLGL 400
Query: 394 SIASVS--GCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+S G ++VP+ + P V IA + +L
Sbjct: 401 FTQPLSFIGLPVLSVPIQNQNSLPLGVQLIAAPDNEVLIL 440
>gi|385209497|ref|ZP_10036365.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
gi|385181835|gb|EIF31111.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
Length = 374
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
TG + A+ D DI GY T A T A R + VV L+ G +GKT + E A+
Sbjct: 13 TGPNIAIKDTIDIAGYATTAASRALADT-PPAQRHAQVVERLLAAGWHIVGKTNMHELAF 71
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N + TP NP +++PGGSSSG+A AV L D +LG DT G +R P+A CG++
Sbjct: 72 GMTGINDYTGTPQNPQDATRIPGGSSSGSAAAVGLKLADAALGTDTGGSIRGPAACCGVI 131
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
G +P++G VS +G+ P ++LD VG FARD
Sbjct: 132 GLKPTFGRVSRLGVAPRESTLDCVGPFARD 161
>gi|254413517|ref|ZP_05027287.1| Amidase, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196179624|gb|EDX74618.1| Amidase, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 457
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 162/383 (42%), Gaps = 48/383 (12%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ FAV +LFD+ G T G A + A+ +T V+ L + GA +G +D
Sbjct: 70 PGVLAGVPFAVKNLFDVAGLTTLAGSKINAE-NPPANHDATAVTRLKQAGAVLVGALNMD 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP P+++ GGSS G+A +VA LV +LG DT G +RVP+A
Sbjct: 129 EYAYGFVTVNSHYGATPNPHDPTRVSGGSSGGSAASVATGLVPLTLGSDTNGSIRVPAAL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CGI G +P+YG +S G I S+SLD +G FAR +R + L + +R P
Sbjct: 189 CGIFGLKPTYGRLSRAGAILFSSSLDHIGPFARS---IRDIATAFDILQGSDERDP---- 241
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVP--SLKGFHKTNGE 292
+ R + + EK G + L+ GEYF +L K
Sbjct: 242 ----------VCTQRPPEPCLPQLEK--GIEGLRIAVAGEYFTQGATPEALDAVAKVAQA 289
Query: 293 L--------------KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETV 338
L + +I E N H + S DP I +
Sbjct: 290 LNVTATVRIPEAHRARAAAYMITATEGANLHFANLRSRPQDFDPATRDRFLAGALIPASW 349
Query: 339 IENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPK-------LGGKEMLSED-----YQ 386
+ R R + L + I++ PTT P+ +GG+E+L Q
Sbjct: 350 YIQAQRFRQWYRQRVQELFQTVDIILAPTTPCVAPRIDQDTMVIGGEEILVRPNLGLFTQ 409
Query: 387 NRAFSLLSIASVSGCCQVTVPLG 409
+F L + SV ++PLG
Sbjct: 410 PLSFIGLPVLSVPVKSSNSLPLG 432
>gi|325283276|ref|YP_004255817.1| Amidase [Deinococcus proteolyticus MRP]
gi|324315085|gb|ADY26200.1| Amidase [Deinococcus proteolyticus MRP]
Length = 388
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 178/409 (43%), Gaps = 56/409 (13%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT--STVVSTLVEG 103
P PLP PL GL+F+V DLF + G+ P A T + S +V+ L++
Sbjct: 17 PADPLPGVPGGPLAGLTFSVKDLFGVAGW------PLSASTRALLPEVAPSPLVTHLLQL 70
Query: 104 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGID 163
GA+ GKT + E A I G N T +P P + GGSSSGAAV A + VDF+LG D
Sbjct: 71 GASAAGKTHLHEIAMGILGANAFGGT-EHPFLPGHVTGGSSSGAAVTAALEQVDFALGTD 129
Query: 164 TVGGVRVPSAFCGILGFRPS--YGAVSHMGIIPISTSLDTVGWFARDPKILRHV-----G 216
T G +R+P+A+CG+ G++P+ + A G++P+S + D G AR+ + V G
Sbjct: 130 TGGSIRIPAAWCGLYGYKPTKDHPAWPTAGVLPLSPTCDHAGPLAREFGTIMRVHEALSG 189
Query: 217 HVLLQLPFAAQR----SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL 272
+ +A R P+ + AD A + + + + E+L VL+ L
Sbjct: 190 ETVPPQDWAGLRVGVWHPQGWLGAD---------AQQALSGMAQRLEQL--GAVLQPVTL 238
Query: 273 GEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML 332
+ D+ P I +E H + P P+I ++
Sbjct: 239 PDMLDAYSP------------------IVGHEAAQVHAAALAQADPGFSPEILEKLRAGQ 280
Query: 333 EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML----SEDYQNR 388
+ ++ + R E R+ ++ + +L+ P PP++G +E+ + +
Sbjct: 281 ALGPAEMQAAYARREEYRTLLAGVFSSCDLLLAPAVPCCPPRIGVEEVALAGGPANIRPA 340
Query: 389 AFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
L + S+ G V VP D V +A G D LL V+ +
Sbjct: 341 VLRLTAPFSMLGSPAVAVP-SAVDWL--GVQLVAPWGEDARLLGLVREL 386
>gi|227827649|ref|YP_002829429.1| amidase [Sulfolobus islandicus M.14.25]
gi|229584853|ref|YP_002843355.1| amidase [Sulfolobus islandicus M.16.27]
gi|238619817|ref|YP_002914643.1| amidase [Sulfolobus islandicus M.16.4]
gi|385773319|ref|YP_005645885.1| amidase [Sulfolobus islandicus HVE10/4]
gi|385775951|ref|YP_005648519.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus REY15A]
gi|227459445|gb|ACP38131.1| Amidase [Sulfolobus islandicus M.14.25]
gi|228019903|gb|ACP55310.1| Amidase [Sulfolobus islandicus M.16.27]
gi|238380887|gb|ACR41975.1| Amidase [Sulfolobus islandicus M.16.4]
gi|323474699|gb|ADX85305.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Sulfolobus
islandicus REY15A]
gi|323477433|gb|ADX82671.1| amidase [Sulfolobus islandicus HVE10/4]
Length = 397
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 169/390 (43%), Gaps = 40/390 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L ++F + D+ +G T G + + + VV ++ G IGKT EFA
Sbjct: 27 LKDVTFGIKDVILTKGIRTTAG--SRILENYVPQKNAYVVDAILREGGKIIGKTNTHEFA 84
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
T+ NP P ++ GGSS G+AVAV D++D +G DT G VR+PS+ CG+
Sbjct: 85 LGATNTSSIGGPARNPIDPERISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGV 144
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDP-KILRHVGHVLL-----QLPFAAQRS-P 230
+GF+P+ G + G+IP S SLDTVG +D +LR V +L ++ A R+ P
Sbjct: 145 IGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLRRVFDAILPNEKKKVEIAKLRTRP 204
Query: 231 RQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD---SKVPSLKGFH 287
R + D E+ +I + + L YFD +P L+ +
Sbjct: 205 RLGLFLFDEMEVSRILLKEI------------------YAKLSSYFDIVEVDLPLLRQYG 246
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
R I E + H +WI D + + ++IS T + R
Sbjct: 247 ------SKTRRTISLAEASSYHKDWITENSDKYFKDTYTLLLDGMKISATDYIDAIRYRR 300
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLS--IASVSGCCQVT 405
+ + K+ +++PTT PK+ ++LS Q R + + + + +V G ++
Sbjct: 301 VLIEEYIKVFKNIDFILSPTTKIVAPKIS--DVLSNPLQFREYLIANTELFNVVGAPSIS 358
Query: 406 VPLGYYDKCPTSVSFIARHGGDRFLLDTVQ 435
+P ++ P + D LL+ +
Sbjct: 359 IPFSTLNELPVGLMISGELYKDGDLLEVTE 388
>gi|189348122|ref|YP_001941318.1| putative Glu-tRNAGln amidotransferase A subunit [Burkholderia
multivorans ATCC 17616]
gi|189338260|dbj|BAG47328.1| putative Glu-tRNAGln amidotransferase A subunit [Burkholderia
multivorans ATCC 17616]
Length = 442
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 174/399 (43%), Gaps = 45/399 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V FD+ GY T G P R AA + +V LV+ GA + T +DEF
Sbjct: 66 PLAGVPFVVKSNFDVAGYATVAGSPTRLRA-PAARCDAAMVDRLVQAGAVPVAATHMDEF 124
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A G N H+ PA PS+M GGSSSG+A AVAA V +LG DT G +R P+A CG
Sbjct: 125 ACGATGVNPHFGAVRLPADPSRMTGGSSSGSAAAVAAGHVPLALGSDTNGSIRAPAALCG 184
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-----QLPFAAQRSPR 231
+ +P++G +S G +P ++SLD G FA + L + L P +P
Sbjct: 185 VWAIKPTHGRLSMDGCVPYASSLDVAGGFAANLDDLCALYDALSGTRRDDSPIG--HAPL 242
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGFHKTN 290
++ + FE AD V+ ++ F +H+++ E D V
Sbjct: 243 RVGVLTGEFERR---ADAQVRRAVERATACFA----QHDHVQAEPIDESVLE-------- 287
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
++ RL+ +E H +++ + + I L I + + + R E +
Sbjct: 288 -PIRGSARLVSNFEVARRHRALLDADASQVSAPLRERIRTGLAIDDAAYADALAHRAEWQ 346
Query: 351 SAISSLLKDDGILVTPTTAYPPPK------------LGGKEMLSEDYQNRAFSLLSIASV 398
+ +++LL+ IL+ P T Y P+ L K L Q +F+ L +
Sbjct: 347 ARLAALLERFDILIAPATPYVAPRFCDATVDVNGEALDSKTTLGMFTQPISFAGLPV--- 403
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
V+ P + P V I G +R LD + +
Sbjct: 404 -----VSAPCHAKGELPAGVQLIGWPGDERRCLDAARRL 437
>gi|186474731|ref|YP_001863702.1| amidase [Burkholderia phymatum STM815]
gi|184198690|gb|ACC76652.1| Amidase [Burkholderia phymatum STM815]
Length = 446
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 177/391 (45%), Gaps = 34/391 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F++ D ++G G P A R +++V L GA GK + E
Sbjct: 62 PLFGIPFSLKDNICVKGLPVTAGTP--GMEDCIAKRDASIVRKLKSLGAVVAGKNNMHEL 119
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
++ I N + T NPAAP + GGSS G A AVAA +V ++G DT G VR+P+AFCG
Sbjct: 120 SFGITSVNPQWGTVVNPAAPEHLAGGSSGGCAAAVAAGIVPIAIGTDTGGSVRIPAAFCG 179
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWF---ARDPKILRHVGHVLLQLPFAAQRSPRQI 233
I GFRP+ G S GIIP+S + D+ G A+D ++L + QLP + + R+I
Sbjct: 180 ITGFRPTSGRWSSAGIIPVSRTKDSPGLLTKTAKDAQLLYELLTPEDQLPTKIKSTRRRI 239
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLF--GRQVLKHEN-----LGEYFDSKVPSLKGF 286
+ + L D V + + +L G Q ++ ++ L + VP + F
Sbjct: 240 GLPASMWTELD---DDVRKHCAHAVRRLTRAGFQCIELDDSAVAGLNKAGTFTVPIYEFF 296
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDI--SAEIGEMLEISE--TVIENC 342
+ R + + N N ++++ DI + G+ + + + I++
Sbjct: 297 -------TDFPRTLLSLGWANRINTVFDNIRDTGVRDIIHTNLAGKFISSRDYSSAIQSI 349
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL--GGKEMLSEDYQNRAFSLLSIASVSG 400
++R +M + S+ D L PT P+L G+ L D +AS +
Sbjct: 350 AALRMQMNTLFSNW--DIDFLAYPTVPRCVPRLIDAGRPGLFADVIRNT----DLASNAA 403
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ P +S A G DR LL
Sbjct: 404 MPSITLPVAPDKSLPVGLSLDAARGQDRRLL 434
>gi|434393972|ref|YP_007128919.1| amidohydrolase, AtzE family [Gloeocapsa sp. PCC 7428]
gi|428265813|gb|AFZ31759.1| amidohydrolase, AtzE family [Gloeocapsa sp. PCC 7428]
Length = 456
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 174/392 (44%), Gaps = 48/392 (12%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ FAV +L+D+ G +T + + A+ +T+V+ L + GA +G +D
Sbjct: 63 PGSLAGVPFAVKNLYDVAG-ITTLAGAKINAENPPATHDATLVAKLKQAGAVLVGTLNMD 121
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP +++ GGSS G+A AVAA+LV +LG DT G +RVP+AF
Sbjct: 122 EYAYGFVTENAHYGATHNPHDFNRVAGGSSGGSAAAVAANLVPITLGTDTNGSIRVPAAF 181
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHV--LLQ-----LPFAAQ 227
CGILG +P+YG +S G+ S+SLD G FAR +R V V LLQ P +
Sbjct: 182 CGILGLKPTYGRLSRAGVALFSSSLDHTGPFARS---VRDVATVFDLLQGYDDRDPVCTR 238
Query: 228 RSPR-------------QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGE 274
+SP +I IA D F P I + E QV + ++ E
Sbjct: 239 KSPELCLPQLNQGIENLRIAIAGDYFTKGAEPE------AIAAVE-----QVAQALDITE 287
Query: 275 YFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
Y +L H+ + +I E N H E + S D I
Sbjct: 288 YI-----TLPEAHRA----RAAAFVITSCEGANLHIEKLRSRPQDFDFATRDRFLAGALI 338
Query: 335 SETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRAFSL 392
+ R R + + ++ I++ PTT P +G K M+ E+ R
Sbjct: 339 PSHWYIQAQRFRRWFRDRVKEVFQNVDIILAPTTPCFAPLIGQKTMILDGEEILIRPHLG 398
Query: 393 LSIASVS--GCCQVTVPLGYYDKCPTSVSFIA 422
L +S G ++VP+ + P V IA
Sbjct: 399 LFTQPLSFIGLPVLSVPIHHPGSLPLGVQLIA 430
>gi|161523052|ref|YP_001585981.1| amidase [Burkholderia multivorans ATCC 17616]
gi|160346605|gb|ABX19689.1| Amidase [Burkholderia multivorans ATCC 17616]
Length = 449
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 174/399 (43%), Gaps = 45/399 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V FD+ GY T G P R AA + +V LV+ GA + T +DEF
Sbjct: 73 PLAGVPFVVKSNFDVAGYATVAGSPTRLRA-PAARCDAAMVDRLVQAGAVPVAATHMDEF 131
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A G N H+ PA PS+M GGSSSG+A AVAA V +LG DT G +R P+A CG
Sbjct: 132 ACGATGVNPHFGAVRLPADPSRMTGGSSSGSAAAVAAGHVPLALGSDTNGSIRAPAALCG 191
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-----QLPFAAQRSPR 231
+ +P++G +S G +P ++SLD G FA + L + L P +P
Sbjct: 192 VWAIKPTHGRLSMDGCVPYASSLDVAGGFAANLDDLCALYDALSGTRRDDSPIG--HAPL 249
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL-GEYFDSKVPSLKGFHKTN 290
++ + FE AD V+ ++ F +H+++ E D V
Sbjct: 250 RVGVLTGEFERR---ADAQVRRAVERATACFA----QHDHVQAEPIDESVLE-------- 294
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
++ RL+ +E H +++ + + I L I + + + R E +
Sbjct: 295 -PIRGSARLVSNFEVARRHRALLDADASQVSAPLRERIRTGLAIDDAAYADALAHRAEWQ 353
Query: 351 SAISSLLKDDGILVTPTTAYPPPK------------LGGKEMLSEDYQNRAFSLLSIASV 398
+ +++LL+ IL+ P T Y P+ L K L Q +F+ L +
Sbjct: 354 ARLAALLERFDILIAPATPYVAPRFCDATVDVNGEALDSKTTLGMFTQPISFAGLPV--- 410
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
V+ P + P V I G +R LD + +
Sbjct: 411 -----VSAPCHAKGELPAGVQLIGWPGDERRCLDAARRL 444
>gi|386080531|ref|YP_005994056.1| putative amidase GatA [Pantoea ananatis PA13]
gi|354989712|gb|AER33836.1| putative amidase GatA [Pantoea ananatis PA13]
Length = 465
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ +AV +LFD++GY T G E AA+R + ++ L + GA G +D +
Sbjct: 70 PLAGIPYAVKNLFDVQGYSTLAGA-ELFGQRPAANRDAFAITQLQQAGALLSGMVNMDAY 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP +++ GGSS G+A AVAA LV FSLG DT G +RVP++ CG
Sbjct: 129 AYGFTTENSHYGATRNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
I G +P++G +S G P SLD +G FAR L V +L
Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVDDLAQVYDLL 231
>gi|162147781|ref|YP_001602242.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786358|emb|CAP55940.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Gluconacetobacter diazotrophicus PAl 5]
Length = 463
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V DLFD+EG VT G R A + +TV++ L GA + +D
Sbjct: 81 PGPLAGVPFGVKDLFDVEGEVTTAGS-VVLREARPAVQDATVIARLRAAGAIPLASLNMD 139
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFAY N HY NP P+++ GGSS G+A AVAA + F+LG DT G +RVP++
Sbjct: 140 EFAYGFATDNAHYGITRNPHDPARLAGGSSGGSAAAVAAGFLPFTLGSDTNGSIRVPASL 199
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA 226
CG+ G +P++G V G P + SLD VG FA LR V + P A
Sbjct: 200 CGVWGLKPTFGTVPREGAYPFAASLDVVGPFAGTLADLRVVHEAMNGAPMPA 251
>gi|365886411|ref|ZP_09425343.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3809]
gi|365338081|emb|CCD97874.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3809]
Length = 466
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFD+ G T G R + ASR +T++ + GA +G + E+
Sbjct: 65 PLAGVPFAVKNLFDVAGLPTRAGS-RINRDRTPASRDATLIERMEAAGAVLVGALNMGEY 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP P++M GGSS G+ AV LV +LG DT G +RVPS+FCG
Sbjct: 124 AYDFTGENVHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPVALGSDTNGSIRVPSSFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
I G +P+YG +S P SLD +G FAR
Sbjct: 184 IFGLKPTYGRLSRARSFPFVMSLDHLGPFAR 214
>gi|221196255|ref|ZP_03569302.1| amidase [Burkholderia multivorans CGD2M]
gi|221202928|ref|ZP_03575947.1| amidase [Burkholderia multivorans CGD2]
gi|221176862|gb|EEE09290.1| amidase [Burkholderia multivorans CGD2]
gi|221182809|gb|EEE15209.1| amidase [Burkholderia multivorans CGD2M]
Length = 448
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 165/400 (41%), Gaps = 33/400 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G V FD EG+VT G A A + + +V+ L GA I +T + EF
Sbjct: 65 PLAGAVLTVKACFDCEGWVTHAGSRVLADDPPART-DAALVAALRRAGAVLIAQTAMTEF 123
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY G N+ Y TP P A ++ GGSSSGAAV++A + D S+G DT G R+P+AF
Sbjct: 124 AYGALGVNRTYGTPATPLDAHRERVAGGSSSGAAVSIALGVADLSVGSDTSGSARIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA------RDPKILRHVGHVLLQLPFAAQR 228
CG+ GF+PS G G+ +ST+ D G A RD + H P A+
Sbjct: 184 CGVAGFKPSRGRYPDAGMQFLSTTFDVPGLIAATAARCRDADVALHGRAAAAATPMPARI 243
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHK 288
++ + + D V ++ + R + + +
Sbjct: 244 GDLHFVVPE------RFATDDNDAAVAQAFDAWLSRLSACGARIERKRLDCIVEAGAVAR 297
Query: 289 TNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIR 346
G I E + H + + DP ++A I GE + + + +R
Sbjct: 298 EGG--------IIAAEAFSLHRARLAACADRYDPLVAARITAGEQVRAHDYAAALVR-LR 348
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDY---QN-RAFSLLSIASVSGCC 402
S ++L + D +L TPT PP++ E+ QN RAF L A+
Sbjct: 349 ALADSYDAALGEADAVL-TPTVPMLPPRM--PELADTAVYLAQNARAFRLTEFANRLDLP 405
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
++VP P + R GGD LLD + +L
Sbjct: 406 SISVPADRRRNRPIGLLMTGRRGGDASLLDAAVRVEHALD 445
>gi|407711726|ref|YP_006836499.1| amidase [Burkholderia phenoliruptrix BR3459a]
gi|407240409|gb|AFT90606.1| amidase [Burkholderia phenoliruptrix BR3459a]
Length = 446
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 177/391 (45%), Gaps = 34/391 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F++ D ++G G P A R +++V L GA GK + E
Sbjct: 62 PLFGIPFSLKDNICVKGLPVTAGTP--GMEDCIAKRDASIVRKLKSLGAVVAGKNNMHEL 119
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
++ I N + T NPAAP + GGSS G A AVAA +V ++G DT G VR+P++FCG
Sbjct: 120 SFGITSVNPQWGTVVNPAAPEHLAGGSSGGCAAAVAAGIVPIAIGTDTGGSVRIPASFCG 179
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWF---ARDPKILRHVGHVLLQLPFAAQRSPRQI 233
I GFRP+ G S GIIP+S + D+ G A+D ++L + QLP + + R+I
Sbjct: 180 ITGFRPTSGRWSSAGIIPVSRTKDSPGLLTKTAKDAQLLYELLSPEDQLPTKMKSTRRRI 239
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLF--GRQVLKHEN-----LGEYFDSKVPSLKGF 286
+ + L D V + + +L G Q ++ ++ L + VP + F
Sbjct: 240 GLPASMWTELD---DDVRKHCAHAVRRLTRAGFQCIELDDSAVAGLNKAGTFTVPIYEFF 296
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDI--SAEIGEMLEISE--TVIENC 342
+ R + + N N ++++ DI + G+ + + + I++
Sbjct: 297 -------TDFPRTLLSLGWANRINTVFDNIRDTGVRDIIHTNLAGKFISSRDYSSAIQSI 349
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKL--GGKEMLSEDYQNRAFSLLSIASVSG 400
++R +M + S+ D L PT P+L G+ L D +AS +
Sbjct: 350 AALRMQMNTLFSNW--DIDFLAYPTVPRSVPRLIDAGRPGLFADVIRNT----DLASNAA 403
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+T+P+ P +S A G DR LL
Sbjct: 404 MPSITLPVAPDKSLPVGLSLDAARGQDRRLL 434
>gi|148553669|ref|YP_001261251.1| amidase [Sphingomonas wittichii RW1]
gi|148498859|gb|ABQ67113.1| Amidase [Sphingomonas wittichii RW1]
Length = 382
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G + AV D DI G T G E A+ + VV+ L+ GGA +GKT + EFAY
Sbjct: 29 GPTVAVKDCIDIAGKRTSVGS-EALSEAPPAAAHAAVVAALIAGGARIVGKTNMHEFAYG 87
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N+ TP NP P +PGGSSSG+A AVAA LV+ ++G DT G +R+P+ CG+ G
Sbjct: 88 VTGVNRWLGTPVNPNYPGLIPGGSSSGSAAAVAAGLVEIAIGTDTGGSIRMPATCCGVFG 147
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+PS+G VS G IP +SLD VG FARD
Sbjct: 148 LKPSFGRVSREGCIPADSSLDCVGPFARD 176
>gi|33595385|ref|NP_883028.1| amidase [Bordetella parapertussis 12822]
gi|33565463|emb|CAE40096.1| probable amidase [Bordetella parapertussis]
Length = 424
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 166/390 (42%), Gaps = 31/390 (7%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL GL AV D+ D T +G P +A A S + V+ + G +GKT
Sbjct: 64 PDPRRPLAGLPIAVKDIIDTADMPTAYGSPIYAGHRPAWS--AYCVAAIETAGGIILGKT 121
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
EFA+S + NP AP PGGSS G+A VA + +L T G P
Sbjct: 122 ATSEFAHSAPPATR------NPHAPQHTPGGSSGGSAACVADFMAPAALATQTGGSTIRP 175
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+AFCG++G++PS G + G+ P++ SLDTVG AR ++ + VL +P A S
Sbjct: 176 AAFCGVVGYKPSLGLIDRTGVKPMAESLDTVGLMARAVADIQLLAGVLAGVPAAPPGSAA 235
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
I L + P ++ +S + L R L+H ++VP L H
Sbjct: 236 PRI------GLYRTP--HWERIDARSRDALLAR--LRHLERHGARVAEVPDLPALHPLYQ 285
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
+ +++M + + + E + PAL + E G S + R
Sbjct: 286 DQRDIMNQQASRALLHEYRQHREQLSPALRAAL--EAGR--ACSPGALRAAWQRTRRARR 341
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYY 411
A + L D ++VTP P + NR +SLL + ++S +P G
Sbjct: 342 AYAELWADYDLIVTPAALGAAPAGIASS--GDSLLNRNWSLLGVPTLS------LPNGAD 393
Query: 412 DK-CPTSVSFIARHGGDRFLLDTVQNMYAS 440
+ P ++ HGGD LL + + A+
Sbjct: 394 PRGLPLAMQLAGSHGGDAALLGWARWIEAA 423
>gi|377820829|ref|YP_004977200.1| amidase [Burkholderia sp. YI23]
gi|357935664|gb|AET89223.1| amidase [Burkholderia sp. YI23]
Length = 380
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
Query: 62 SFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSIN 121
+ A+ D DI GY T A + + A R + VV L++ G GK + E A+ +
Sbjct: 20 TIAIKDSIDIAGYPTTAASEALADS-APALRHAPVVQRLLDAGWRISGKANMHELAFGMT 78
Query: 122 GTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFR 181
G N+ TP NP P+++PGGSSSG+A AV LVD +LG DT G VR P+A CG++G +
Sbjct: 79 GINEFSGTPVNPQDPARIPGGSSSGSASAVGLGLVDAALGTDTGGSVRCPAACCGVIGLK 138
Query: 182 PSYGAVSHMGIIPISTSLDTVGWFARD 208
P++G VS G+ P TSLD VG FARD
Sbjct: 139 PTFGRVSREGVAPRQTSLDCVGPFARD 165
>gi|220924666|ref|YP_002499968.1| amidase [Methylobacterium nodulans ORS 2060]
gi|219949273|gb|ACL59665.1| Amidase [Methylobacterium nodulans ORS 2060]
Length = 468
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 187/411 (45%), Gaps = 41/411 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ AV DL DIEG +T G + A+ T+T+V L+ G +GKT EF
Sbjct: 78 PLHGVPVAVKDLIDIEGRITTGG--SMTMRNRRATATATIVRRLIAQGMILLGKTHTVEF 135
Query: 117 AYSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+ GTN+ TP NP P+ + PGGSSSG+ VAVA+ L +++G DT G VR+P++F
Sbjct: 136 AFGGWGTNQRMGTPRNPWDPAHPRTPGGSSSGSGVAVASRLAPWAIGTDTGGSVRLPASF 195
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKILRHVGHVLLQLPFAAQRSPR 231
CGI G + + G VS G++P+ST+LDT G AR D +L +V +Q P R
Sbjct: 196 CGITGLKVTVGRVSTHGVLPLSTTLDTPGPMARSVEDVALLFNV----IQGPDPLDPITR 251
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
I D L +R V+ + R+ + L Y +L+ +
Sbjct: 252 GIAPVDPMPVL-----ERGVRGLRLGRMPAAEREGCAADVLAAYDR----ALELLDRAGA 302
Query: 292 ELKNVMRLIQRYEFKNN----------HNEWI-ESVKPALDPDISAEIGEMLEISETVIE 340
E+ ++ + +F N HN I E LD D+ A I +S
Sbjct: 303 EIVDIQLPFRFVDFVNAAAILQAEAYFHNGAIAEDFAAPLDEDVRARILSGAAVSARDYL 362
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSG 400
+ ++ +MR A + L+TPTT +L + + + F+ +
Sbjct: 363 RTRRLQQDMRRAFDRAMSGLDALLTPTTETAAIRL---DAVDQAVMPSRFT--RFGNFLE 417
Query: 401 CCQVTVPLGY-YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATK 450
C + +P G+ + P S+ + R GGD + + Y Q+ D T+
Sbjct: 418 LCALALPNGFSAEGLPLSLQVVCR-GGDEPMALRIGQAY---QQATDWHTR 464
>gi|395325095|gb|EJF57523.1| amidase signature enzyme [Dichomitus squalens LYAD-421 SS1]
Length = 637
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 186/429 (43%), Gaps = 38/429 (8%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P P G AV D++D++G TG G+ + + + S T+ V L++GG IGKT
Sbjct: 203 PTVEKPFAGKRLAVKDIYDVQGLHTGCGNRAFWQFYPPKSATAPAVQRLLDGGMILIGKT 262
Query: 112 VVDEFAYSINGTNKHYD--TPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGG 167
+FA T+ D P NP Q SS+G+ A+AA +DF++G DT G
Sbjct: 263 KTSQFANGELATDDWVDLHAPYNPRGDGYQDGSSSSTGSGTAIAAYAWLDFTIGSDTGGS 322
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+R P+ G+ G RPS+GAVS ++P+S LDT G F+RD K+ VGH Q +
Sbjct: 323 MRGPAGANGVFGNRPSHGAVSLDNVMPLSPELDTGGVFSRDAKLWAEVGHWWYQNSTSFS 382
Query: 228 RSPRQIIIADDCFE---LLKIPADRVV----QVVIKSTEKLFGRQVLKHENLGEYFDSKV 280
+ P++I+ D + L PA V I EK + + ++K
Sbjct: 383 KFPKKILFPTDFWGTSFLQNPPAGNSVSGTFNTFITKLEKFLETNRTEISFSLTWNETKP 442
Query: 281 PSLKG-----FHKTNGELKNVMRL-IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
++ G T +L ++ ++ + F N+ P +DP A +
Sbjct: 443 ATVSGTVQQLLTTTYADLISLDQIALVADPFINDFGAANGGRAPFIDPAPLARWNYGRAL 502
Query: 335 SETVIENCKSIRNEMRSAISS-LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNR----- 388
E + R R ++S +LK D + + P GG E + Y N
Sbjct: 503 PAGRKEQAAANRTIFRDWVASEVLKSDPTTCSDSILLYPQSRGGTEYRNA-YINPPSAPL 561
Query: 389 AFSLLSIASVSGCCQVTVPLGY--YDKC--------PTSVSFIARHGGDRFLLDTVQNMY 438
FS +A + + VP+G Y+ P ++SF+A G D L N++
Sbjct: 562 GFSSGRLAVHAELPDMVVPIGEAPYNSTVTGKTEFLPVTISFVAAKGCDLMLF----NLF 617
Query: 439 ASLQEQADI 447
A+LQ+ I
Sbjct: 618 AALQDAGII 626
>gi|319781387|ref|YP_004140863.1| amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167275|gb|ADV10813.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 431
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 171/395 (43%), Gaps = 47/395 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G ++ DL D+ G T G RT + R + +VS L + GA IGKT + EF
Sbjct: 52 PLDGTIVSIKDLLDVAGEPTRAGS-LMLRTTAPPLRDAVIVSRLRQAGAVIIGKTNMTEF 110
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A++ G N+H+ TP N S++PGGSSSGA V+V + S+G DT G +R+P++ G
Sbjct: 111 AFTAIGDNQHFGTPGNAVDASRIPGGSSSGAGVSVGEGTSEISIGSDTGGSIRIPASLNG 170
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR--------DPKILRHVGHVLLQLPFAAQR 228
++GF+P+ V G P+S +LD++G AR D + V L + A R
Sbjct: 171 VVGFKPTARRVPLAGAFPLSATLDSIGPLARTVAQCAAADAVMAGEVPTALTPIALAGLR 230
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEY-----FDSKVPSL 283
+ IP + + F R + K E G D + L
Sbjct: 231 --------------IGIPRGVLFEETEDEVATAFDRCLGKIEQTGARIEDLSIDDLLADL 276
Query: 284 KGFHKTNGELKNVMRLIQRYEFKNNHNEWIES-VKPALDPDISAEIGEMLEISETVIENC 342
+ K I E H +W+ + +DP +S + + V
Sbjct: 277 RAATKRGS--------IAAMEGAEVHADWLATGASVPVDPHVSGPLSRAAMLPTPVYIRA 328
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED--YQNRAFSLL----SIA 396
R + +A+ L +L PTT P + +S+D ++R LL +A
Sbjct: 329 MRRRTALAAAMDERLSSVDVLALPTTPVTAPTI---VSMSDDAGLRDRTEGLLLRNTQVA 385
Query: 397 SVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ C +++P+ + P + +AR+G D+ LL
Sbjct: 386 NQFDLCAISLPM-PGTQLPAGLMLVARNGHDQRLL 419
>gi|337266663|ref|YP_004610718.1| allophanate hydrolase [Mesorhizobium opportunistum WSM2075]
gi|336026973|gb|AEH86624.1| allophanate hydrolase [Mesorhizobium opportunistum WSM2075]
Length = 614
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ FAV D D+ G T PE+ + +TVV+ L GA +GKT +
Sbjct: 63 ATKPLWGIPFAVKDNIDVAGMPTTAACPEYTYWPE---KDATVVARLKAAGALVVGKTNL 119
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
D+FA + G + P N + +PGGSSSG+AVA A +V F+LG DT G R+P+
Sbjct: 120 DQFATGLVGVRTPWPIPRNAIDEALVPGGSSSGSAVATARGIVAFALGTDTAGSGRIPAG 179
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +P+ GA+S G++P +LD V FA
Sbjct: 180 LNNIVGLKPTVGALSAAGVVPACRTLDCVSVFA 212
>gi|209542403|ref|YP_002274632.1| amidohydrolase, AtzE family [Gluconacetobacter diazotrophicus PAl
5]
gi|209530080|gb|ACI50017.1| amidohydrolase, AtzE family [Gluconacetobacter diazotrophicus PAl
5]
Length = 454
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V DLFD+EG VT G R A + +TV++ L GA + +D
Sbjct: 72 PGPLAGVPFGVKDLFDVEGEVTTAGS-VVLREARPAVQDATVIARLRAAGAIPLASLNMD 130
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFAY N HY NP P+++ GGSS G+A AVAA + F+LG DT G +RVP++
Sbjct: 131 EFAYGFATDNAHYGITRNPHDPARLAGGSSGGSAAAVAAGFLPFTLGSDTNGSIRVPASL 190
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAA 226
CG+ G +P++G V G P + SLD VG FA LR V + P A
Sbjct: 191 CGVWGLKPTFGTVPREGAYPFAASLDVVGPFAGTLADLRVVHEAMNGAPMPA 242
>gi|398995023|ref|ZP_10697914.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM21]
gi|398131079|gb|EJM20407.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM21]
Length = 382
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+G A+ D DI G+ T G +A + A+R + VV +++ G +GKT + E A+
Sbjct: 13 SGKRVAIKDSIDIAGHATRSGSRAFADA-APATRNADVVDAILDAGWQIVGKTNMHELAF 71
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
+ G N TP NP AP ++PGGSSSG+A AVA L D ++G DT G VRVP+A CGI
Sbjct: 72 GVTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAGGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
G +P+YG VS +G P +SLD VG FA D
Sbjct: 132 GLKPTYGRVSRVGAHPAESSLDCVGPFAAD 161
>gi|398886529|ref|ZP_10641403.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM60]
gi|398189439|gb|EJM76714.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM60]
Length = 390
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G A+ D DI G+ T G +A A R + VV +++ G +GKT + E A+
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFAEAEPAL-RNADVVDAILDAGWQIVGKTNMHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N TP NP AP ++PGGSSSG+A AVAA L D ++G DT G VRVP+A CGI G
Sbjct: 73 VTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+P+YG VS +G P+++SLD VG FA D
Sbjct: 133 LKPTYGRVSRVGAHPLASSLDCVGPFAAD 161
>gi|374578539|ref|ZP_09651635.1| amidohydrolase, AtzE family [Bradyrhizobium sp. WSM471]
gi|374426860|gb|EHR06393.1| amidohydrolase, AtzE family [Bradyrhizobium sp. WSM471]
Length = 465
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 148/343 (43%), Gaps = 41/343 (11%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
KA PL G+ FAV +LFD+ G T G + R + A+R +T++ + GA +G
Sbjct: 67 KAVGPLAGVPFAVKNLFDVAGLATRAGS-KINRDRAPATRDATLIERMEAAGAVLVGALN 125
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+ E+AY G N H NP ++M GGSS G+ AV LV +LG DT G +RVPS
Sbjct: 126 MGEYAYDFTGENVHDGPSRNPHDTTRMSGGSSGGSGSAVGGALVPIALGSDTNGSIRVPS 185
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
+FCGI G +P+YG +S P SLD +G FAR L L + A + P
Sbjct: 186 SFCGIFGLKPTYGRLSRARSFPFVASLDHLGPFARS--------ATDLALAYDAMQGPD- 236
Query: 233 IIIADDCF--------ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLK 284
ADD L + A+ V + I F +NL F V ++
Sbjct: 237 ---ADDAACTTTRGLEPTLPLLANPVSDLRIAIAGGYF------QQNL---FPEAVEAVS 284
Query: 285 GFHKTNGELKNV-----------MRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE 333
K G + V +I E + H + + DP + +
Sbjct: 285 RVAKALGATRVVDVPEAARARAAAYVITTTEGASLHLDRLRKRPNDFDPAVRDRLIAGAM 344
Query: 334 ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG 376
+ +++ + R R+ ++ + K +L+ P T PKLG
Sbjct: 345 VPAPLVDRAQKFRRWYRAQLAEIFKSVDVLIAPATPCTAPKLG 387
>gi|107025692|ref|YP_623203.1| amidase [Burkholderia cenocepacia AU 1054]
gi|105895066|gb|ABF78230.1| Amidase [Burkholderia cenocepacia AU 1054]
Length = 452
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V D+ GY T G P A A + +T+V+ + GA IG T +D
Sbjct: 70 PGPLAGVPFLVKWNIDVAGYTTVAGSPARAALPPAVA-DATIVARMCAAGAIPIGATQMD 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A G N HY PA P++M GGSSSG+A AVAA V +LG DT G VR P+A
Sbjct: 129 ELACGATGVNPHYGAVRLPADPTRMTGGSSSGSAAAVAAGYVPLALGSDTNGSVRAPAAL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
CG+ GFRP G +S G +P + SLDTVG FA D
Sbjct: 189 CGVWGFRPGDGRLSRAGCLPYADSLDTVGGFAND 222
>gi|158312532|ref|YP_001505040.1| amidase [Frankia sp. EAN1pec]
gi|158107937|gb|ABW10134.1| Amidase [Frankia sp. EAN1pec]
Length = 523
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL FAV D DI G T G P+++R + T+ V+ L+ GA C+GKT +D+F
Sbjct: 104 PLFGLPFAVKDNIDIAGLPTTAGCPDFSRLPAG---TAPAVARLLAAGAVCVGKTNLDQF 160
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A ++GT Y P +P P + GGSSSG+ VAVA LV F++G DT G RVP+A
Sbjct: 161 ATGLSGTRSPYGIPASPFDPYMIAGGSSSGSGVAVADGLVTFAVGTDTAGSGRVPAALTN 220
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+G +PS G VS G++P SLD FA
Sbjct: 221 TVGLKPSRGLVSTRGVVPACRSLDCPSVFA 250
>gi|388469706|ref|ZP_10143915.1| putative amidase IacH [Pseudomonas synxantha BG33R]
gi|388006403|gb|EIK67669.1| putative amidase IacH [Pseudomonas synxantha BG33R]
Length = 370
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 59 TGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAY 118
+GLS V D DI G+ T G + +AA + VV L+ G +GKT + E A+
Sbjct: 13 SGLSVMVKDTIDIAGFATRAGS-QALENAAAAQEHAQVVEALLAGNCRILGKTSLHELAF 71
Query: 119 SINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGIL 178
G N T NP P +PGGSSSG+A AVAA LVDF+LG DT G VRVP+A CG+
Sbjct: 72 GTTGINHWSGTADNPLYPGLIPGGSSSGSAAAVAAGLVDFALGTDTGGSVRVPAACCGVF 131
Query: 179 GFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G +P++G +S G++P +SLD VG FA ++L V + F AQ P + I
Sbjct: 132 GLKPTFGRISRAGVMPGVSSLDCVGPFAASMELLIAAMQV-IDPGFIAQSCPPNLSI 187
>gi|365899622|ref|ZP_09437513.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3843]
gi|365419583|emb|CCE10055.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3843]
Length = 458
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 146/331 (44%), Gaps = 26/331 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFD++G T G + R A+R +T++ + GA +G + E+
Sbjct: 65 PLAGVPFAVKNLFDVKGLATRAGS-KINRDLPPAARDATLIERMEAAGAVLVGALNMGEY 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP ++M GGSS G+ AV LV +LG DT G +RVPS+FCG
Sbjct: 124 AYDFTGENVHDGPSRNPHDATRMSGGSSGGSGSAVGGRLVPLALGSDTNGSIRVPSSFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG +S P SLD +G FAR + L L + A + P
Sbjct: 184 IFGLKPTYGRLSRARSFPFVASLDHLGPFARSVED--------LALAYDAMQGPDP---- 231
Query: 237 DDCFELLKIPADRVVQVVIKSTE----KLFGRQVLKHENLGEYFDSKVPSLKGFHKTN-- 290
DD ++P + V ++ + L G KH E ++ K + T
Sbjct: 232 DDAACTSRVP-EPVTPLLWQGISGLRVALAGGHFQKHL-FPEAIEAVGRVAKALNATEVI 289
Query: 291 -----GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
+ +I E + H + + + DP + + I +++ +
Sbjct: 290 EVPEAARARAAAYVISTTEGASLHLDRLRTRAHDFDPAVRDRLIAGAMIPAPLVDRAQKF 349
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLG 376
R R+ + L K +L+ P T PKLG
Sbjct: 350 RRWYRAQVLELFKQVDLLIAPATPCIAPKLG 380
>gi|116693126|ref|YP_838659.1| amidase [Burkholderia cenocepacia HI2424]
gi|116651126|gb|ABK11766.1| Amidase [Burkholderia cenocepacia HI2424]
Length = 446
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V D+ GY T G P A A + +T+V+ + GA IG T +D
Sbjct: 64 PGPLAGVPFLVKWNIDVAGYTTVAGSPARAALPPAVA-DATIVARMCAAGAIPIGATQMD 122
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A G N HY PA P++M GGSSSG+A AVAA V +LG DT G VR P+A
Sbjct: 123 ELACGATGVNPHYGAVRLPADPTRMTGGSSSGSAAAVAAGYVPLALGSDTNGSVRAPAAL 182
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
CG+ GFRP G +S G +P + SLDTVG FA D
Sbjct: 183 CGVWGFRPGDGRLSRAGCLPYADSLDTVGGFAND 216
>gi|404402418|ref|ZP_10994002.1| amidase [Pseudomonas fuscovaginae UPB0736]
Length = 374
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 176/393 (44%), Gaps = 39/393 (9%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G + V D D+ G VT + T AS + VV L++ G + KT + E A+
Sbjct: 14 GPTVMVKDTIDVAGLVT-RASSQALNTAPPASAHAEVVQALLDKGCHLVAKTSLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
G N T NP P ++PGGSSSG+A AVAA L DF+LG DT G VRVP+ CG+ G
Sbjct: 73 TTGINHWTGTAPNPRFPGRIPGGSSSGSAAAVAAGLADFTLGTDTGGSVRVPACCCGVFG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARD-PKILRHVGHVLLQL-PFAAQRSPRQIIIAD 237
F+P++G VS G++P +SLD VG FA P ++ + + P + Q+ PR
Sbjct: 133 FKPTFGRVSRRGVMPARSSLDCVGPFAASLPMLITAMQAIDATFQPVSVQQQPR------ 186
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVM 297
+L + A VQ VI + + G + H +PS + M
Sbjct: 187 --LGVLTVDASATVQRVIDAV--VAGSGLPTHS-------ISLPSFDAAYAAG------M 229
Query: 298 RLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLL 357
+I R F + +ES + + DI++ + + + N + +R + + + L
Sbjct: 230 VVINRETF-DACGHLLESGQ--VGADIASRLAAAGTTTAEALANAEQVREQFTFEVDAAL 286
Query: 358 KDDGILVTPTTAYPPPKLGG----KEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDK 413
+ +L+ PT P ++ + +L R F+L SG + +PLG +
Sbjct: 287 RQVDVLLLPTMPDFPLRIADAADTQAVLGMTRFVRPFNL------SGHPALNIPLGSAEG 340
Query: 414 CPTSVSFIARHGGDRFLLDTVQNMYASLQEQAD 446
P + + G D +L ++ L + D
Sbjct: 341 LPVGLQLVGAKGADEQVLAIAGHLLERLYSRHD 373
>gi|302832305|ref|XP_002947717.1| hypothetical protein VOLCADRAFT_87871 [Volvox carteri f.
nagariensis]
gi|300267065|gb|EFJ51250.1| hypothetical protein VOLCADRAFT_87871 [Volvox carteri f.
nagariensis]
Length = 173
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 88/168 (52%), Gaps = 48/168 (28%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+FAV DLFD L++ GAT GKT +DE
Sbjct: 34 PLKGLAFAVKDLFD----------------------------ALLDAGATLRGKTHMDEL 65
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAA--------------------VAVAADLV 156
AYS+NG N HY TP NPAAP ++PGGSSSG+A VAVAA V
Sbjct: 66 AYSLNGENIHYGTPINPAAPGRIPGGSSSGSASWSWSRACIWYGVDKTDLGKVAVAAGDV 125
Query: 157 DFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGW 204
+LG DT G VRVP+A+CG+ G RP++ S G P++ S DT GW
Sbjct: 126 PVALGSDTGGSVRVPAAYCGLYGIRPTWARTSLAGARPLAPSFDTAGW 173
>gi|434403807|ref|YP_007146692.1| amidohydrolase, AtzE family [Cylindrospermum stagnale PCC 7417]
gi|428258062|gb|AFZ24012.1| amidohydrolase, AtzE family [Cylindrospermum stagnale PCC 7417]
Length = 454
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 169/379 (44%), Gaps = 22/379 (5%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ FAV +LFDI G T G A + A++ +T V+ L + GA IG +D
Sbjct: 64 PGVLAGVPFAVKNLFDIAGLTTLAGAKINAE-NPPATQDATAVAKLKQAGAVLIGALNMD 122
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP ++ GGSS G+A AVAA+LV +LG DT G +RVP+A
Sbjct: 123 EYAYGFVTENSHYGATHNPHDLQRVAGGSSGGSAAAVAAELVPLTLGSDTNGSIRVPAAL 182
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQ-----LPFAAQRS 229
CG+ GF+P+YG +S G+ S+S D +G FA + + + LLQ P +R
Sbjct: 183 CGVFGFKPTYGRLSRAGVALFSSSFDHIGPFAGSVRDI-ATAYDLLQGEDARDPVCTKRF 241
Query: 230 PRQII--IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFH 287
P + + + D + AD +S +QV + ++ E+ ++P K
Sbjct: 242 PERCLPKLNQDISGIRIAIADNDFTQGAESEALAAVQQVAEALDITEFV--RIPEAK--- 296
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
+ +I E N H + S DP I + + R
Sbjct: 297 ----RARAAAFVITASEGANLHLAKLRSRPQDFDPATRNRFLAGALIPSSWYLQAQRFRR 352
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI----ASVSGCCQ 403
R I + ++ +++ PTT P +G + M+ + + L I S G
Sbjct: 353 WYRDRIREVFQNVDVILAPTTPISAPLIGQQTMILDGEEILVRPHLGIFTQPLSFIGLPA 412
Query: 404 VTVPLGYYDKCPTSVSFIA 422
++VP+ + P V IA
Sbjct: 413 LSVPIQRPNTLPLGVQLIA 431
>gi|295701185|ref|YP_003610186.1| amidase [Burkholderia sp. CCGE1002]
gi|295441508|gb|ADG20675.1| Amidase [Burkholderia sp. CCGE1002]
Length = 447
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 171/391 (43%), Gaps = 34/391 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F++ D G+ G P A+R + +V L GA GK + E
Sbjct: 62 PLYGIPFSLKDNICASGFPVTAGTP--GMEGCIATRDAIIVRKLKSLGAVVAGKNNMHEL 119
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
++ I N + T NP AP + GGSS G A AVAA +V ++G DT G VR+P+AFCG
Sbjct: 120 SFGITSVNPRWGTVGNPTAPGYLAGGSSGGCAAAVAAGIVPIAIGTDTGGSVRIPAAFCG 179
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL---PFAAQ-RSPRQ 232
I+GFRP+ G S GIIP+S + D+ G R K + H LL P A Q R+P +
Sbjct: 180 IVGFRPTSGHWSSAGIIPVSRTKDSPGLLTRTAKDALMI-HELLSTGTRPPAKQIRTPCR 238
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
I + + L + V K R + + DS V L
Sbjct: 239 IGLPASMWSNLN-------EDVRKHCWHAITRLIRAGFECVDLDDSAVADLNRIGTFTIP 291
Query: 293 L----KNVMRLIQRYEFKNNHNEWI-----ESVKPALDPDISAEIGEMLEISETVIENCK 343
+ + R + + + N N E+V+ + ++SA++ + S I+N
Sbjct: 292 VYEFFMDFPRTLLSFGWANRINAIFDNIRDEAVRNIVHSNLSAQLISAADYS-FAIQNVG 350
Query: 344 SIRNEMRSAISSLLKDDGILVTPTTAYPPPKL---GGKEMLSEDYQNRAFSLLSIASVSG 400
+R +M++ ++ D L PT P G E+ SE +N +AS +
Sbjct: 351 LLRQQMKNLFTTQGVD--FLAYPTVPCSVPHCSDAGRPELFSEVIRN-----TDLASNAA 403
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
VT+P+ P +S A G DR LL
Sbjct: 404 MPSVTLPVAPDGALPVGLSLDAPRGQDRRLL 434
>gi|399069203|ref|ZP_10749330.1| amidohydrolase, AtzE family [Caulobacter sp. AP07]
gi|398045262|gb|EJL38004.1| amidohydrolase, AtzE family [Caulobacter sp. AP07]
Length = 463
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 165/384 (42%), Gaps = 36/384 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G FAV +LFD+ G T G + R A+R +T + L GA +G +DEF
Sbjct: 68 PLAGAPFAVKNLFDVAGVTTVAGS-KIRRDAPPATRDATAIRRLTAAGAVLVGALNMDEF 126
Query: 117 AYSINGTNKHYDTPT-NPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
AY N H D PT NP ++ GGSS G+A AVAA LV +LG DT G +R+P++ C
Sbjct: 127 AYGFVTENAH-DGPTRNPHDRGRIAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRIPASLC 185
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLP---------FAA 226
G+ G +P+ G +S G P SLD +G FAR L + + L+Q P A
Sbjct: 186 GVFGLKPTLGRLSRQGAFPFVESLDHIGPFARSVADL-ALAYDLMQGPDPLDPLCRRPAE 244
Query: 227 QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGF 286
+PR IAD RV + + F + E + + ++ +G
Sbjct: 245 PAAPRLQAIADAPL--------RVGMLGGWFAQGAFPEVLEALEIVADALQAR----RGI 292
Query: 287 HKTNGELKNVMRL-IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSI 345
E + E H + +++ DP + + + V E +
Sbjct: 293 ELPGAEQARAAAFCLTAAEGGELHLDDLKARALDYDPAVRDRLLAGALLPHGVAEAARRY 352
Query: 346 RNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSL-------LSIASV 398
R R A++ + +D IL+ P + P P +G M D +A S+ S
Sbjct: 353 RPIFRDAVAKVFEDFDILLAPASVCPAPGVGQATM---DMGGQAVSVRKNLGAYTQPISY 409
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIA 422
G VTVPL K P V IA
Sbjct: 410 IGLPVVTVPLNRPGKLPIGVQVIA 433
>gi|116625172|ref|YP_827328.1| amidase [Candidatus Solibacter usitatus Ellin6076]
gi|116228334|gb|ABJ87043.1| Amidase [Candidatus Solibacter usitatus Ellin6076]
Length = 468
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 148/341 (43%), Gaps = 42/341 (12%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFG---HPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P PL G+ FAV +LFDI G T G H E A A+ +TVV L GA +G
Sbjct: 71 PGPLCGVPFAVKNLFDIAGLTTLAGSKIHAECA----PAAHDATVVERLKSAGAIAVGAL 126
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+DE+AY N HY NP ++ GGSS G+A AVAA LV +LG DT G +RVP
Sbjct: 127 NMDEYAYGFTTENSHYGPTRNPHDLERVAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVP 186
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+AFCG+ G +P+YG +S G S D VG FAR VG L L F P
Sbjct: 187 AAFCGVFGLKPTYGRISRAGAFLFCESFDHVGPFARS------VGD--LALAFDTLHGPD 238
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSK-VPSLKGFHKTN 290
A D + + R + V+ E+ G L+ G YF + +P T
Sbjct: 239 ----ARD-----PVCSARQAEPVLPQLER--GIDGLRIAVAGGYFARRGMPEAFAPVTTA 287
Query: 291 GELKNVMR---------------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEIS 335
VMR +I E H + +++ DP + +
Sbjct: 288 ARALGVMRTVEVPDSDVARAAAYVITACEGSRMHFQDLKTRPQDFDPLVVDRFLAGALLP 347
Query: 336 ETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG 376
T + + R R+ + L ++ IL+ P T P ++G
Sbjct: 348 ATWYQQAQRFRTVFRAKVRELFQNVDILLAPATPCPAIRIG 388
>gi|398782994|ref|ZP_10546610.1| amidase [Streptomyces auratus AGR0001]
gi|396996279|gb|EJJ07273.1| amidase [Streptomyces auratus AGR0001]
Length = 445
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 170/388 (43%), Gaps = 52/388 (13%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGH---PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
L G+ + D+ +G T G PE R +TVV L GA GKTV
Sbjct: 71 LYGVPVGIKDIVHADGLPTRAGSALPPE-----VLGGRQATVVDRLCAAGALIAGKTVTA 125
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA + G + NP + PGGSSSG+A AVAA +V ++G TVG + P+A+
Sbjct: 126 EFAVTAPGPTR------NPHHLAHTPGGSSSGSAAAVAAGMVPLAIGTQTVGSMIRPAAY 179
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLL-----QLPFAAQRS 229
CG++GF+P+YG + G+IP + S DT+GW+A D + VL+ Q P
Sbjct: 180 CGVVGFKPTYGRIPVAGVIPNAASFDTLGWYATDVAGIALAASVLVDGWRTQRPAGPSLR 239
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENL--GEYFDSKVPSLKGFH 287
P +L +P ++ ++ ++ G + E+L Y +VP + F
Sbjct: 240 P-----------VLGVPVGPYLE---RAGDEALGAFTAQRESLRAAGYTVHEVPVMDDFE 285
Query: 288 KTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRN 347
+T +L + RYE H +W P+ +A I + I++T + R
Sbjct: 286 QTVAQLFT----MNRYEVARAHADWFARFGDVYRPETTAAIQQGHTIADTDYAAARQRRK 341
Query: 348 EMRSAISSLLKDDGI--LVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIA-SVSGCCQV 404
R+ +++ GI + P+ P P D S++ + S +G +
Sbjct: 342 AFRARLATDRAAAGIDLWIAPSATGPAPA---------DLTTTGTSIMCLPWSNAGLPAI 392
Query: 405 TVPLGY-YDKCPTSVSFIARHGGDRFLL 431
++P G+ + P + I G D LL
Sbjct: 393 SLPAGHAANGLPLGLQLIGDFGADEELL 420
>gi|384247058|gb|EIE20546.1| allophanate hydrolase [Coccomyxa subellipsoidea C-169]
Length = 530
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 105/195 (53%), Gaps = 15/195 (7%)
Query: 22 MTKKLKKNIKQDFGAFI---------EKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIE 72
+ ++L + Q+ G FI E+ ++L + LPP A PL G+ FAV D D+
Sbjct: 24 VIRRLYPLLAQEEGMFITLASLESLLERCRIL---EVLPPAARGPLYGVPFAVKDNIDVA 80
Query: 73 GYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTN 132
G+ T + T S+++ V L+E G +GKT +D+FA + GT Y T N
Sbjct: 81 GFPTTAACEAYRYT---PSQSAPGVEALLEAGGVMVGKTNLDQFAAGLVGTRTPYGTARN 137
Query: 133 PAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGI 192
P +PGGSSSG+ AV L+ F+LG DT G RVP+ FCG +G +P+ G VS G+
Sbjct: 138 PFDDRFLPGGSSSGSGAAVGCGLLTFALGTDTAGSGRVPAHFCGCVGIKPTVGRVSSTGV 197
Query: 193 IPISTSLDTVGWFAR 207
+ +LD + FAR
Sbjct: 198 VRACRALDCISVFAR 212
>gi|452958266|gb|EME63620.1| amidase [Rhodococcus ruber BKS 20-38]
Length = 452
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G++ AV D D+ G T G A AA + + +V L E GA + KT + EF
Sbjct: 70 PLHGVAVAVKDNIDVAGMPTRCGSNVLADVAPAA-QDARIVERLREAGAVVVAKTHLHEF 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY +G +P P+++ GGSSSG+A VA +V +LG DT VR P+A CG
Sbjct: 129 AYGPSGLVNAAGPARHPHDPTRITGGSSSGSAALVAKGVVPLALGTDTGCSVRTPAALCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
++G +P++GA+ G+ P+ST+ D VG ARD
Sbjct: 189 VVGLKPTFGALPVDGVFPLSTTFDHVGLLARD 220
>gi|402826255|ref|ZP_10875469.1| amidase [Sphingomonas sp. LH128]
gi|402260200|gb|EJU10349.1| amidase [Sphingomonas sp. LH128]
Length = 451
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 165/378 (43%), Gaps = 31/378 (8%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+ P PL G+ + V DLFD++G T G + A S + V+ L GA C+
Sbjct: 60 RDPGPLAGVLYGVKDLFDLQGLPTTAGSTIYVDAAPARS-DAEAVARLKAAGAICLATLN 118
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DEFAY N Y T NP PS++ GGSS G+A VAA L+ F+LG DT G +RVP+
Sbjct: 119 MDEFAYGFATINAAYGTTRNPHDPSRLAGGSSGGSAAVVAAGLLAFALGSDTNGSIRVPA 178
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
+ CG+ G +P+ + G+ P + S D +G F R + + V VL A R P
Sbjct: 179 SLCGLYGLKPTQEGLPLAGVFPFAESFDDIGPFTRSVEDMALVWQVL------AGREP-- 230
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD-SKVPSLKGFHKTNG 291
+ F R+ ++ + E G Q+ + + ++P +
Sbjct: 231 --ASRSEF--------RIARLGGRFRENAQGEQLAAIDAIAPDAPLIELPEI-------A 273
Query: 292 ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRS 351
++ +I YE H + + DP + + + ET+ E ++ R E R+
Sbjct: 274 RARSAAFIITAYEGGTLHRQALAENAMGFDPQVRDRLLAGALLPETLYEEAQAFRAEYRA 333
Query: 352 AISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI----ASVSGCCQVTVP 407
I +L+ D +L+ P T P + +L + + A + L I + + + VP
Sbjct: 334 RIEALVADYDVLLAPATPTFAPPIADPRILIDGALSPARADLGIHTQPITFTALPSLAVP 393
Query: 408 LGYYDKCPTSVSFIARHG 425
L P + I G
Sbjct: 394 LYRPGMLPIGLQLIGGPG 411
>gi|170742737|ref|YP_001771392.1| amidase [Methylobacterium sp. 4-46]
gi|168197011|gb|ACA18958.1| Amidase [Methylobacterium sp. 4-46]
Length = 473
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 157/328 (47%), Gaps = 31/328 (9%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ DL D+EG ++ G R A+ ++TV ++ G +GKT EF
Sbjct: 83 PLHGVPVALKDLIDVEGRISTGG--SMTRRVQRATASATVAKRMIAQGMILLGKTHTVEF 140
Query: 117 AYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+ GTN+H TP NP P++ +PGGSSSG+ VAVA+ + +++G DT G VR+P++F
Sbjct: 141 AFGGWGTNQHMGTPLNPWDPARPRVPGGSSSGSGVAVASRMAPWAIGTDTGGSVRLPASF 200
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKILRHVGHVLLQLPFAAQRSPR 231
CGI G + + G VS G++P+ST+LDT G AR D +L +V LQ P + R
Sbjct: 201 CGITGLKVTVGRVSTAGVLPLSTTLDTPGPMARSVEDVALLYNV----LQGPDPLDPNTR 256
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG 291
++ D L +R V+ + R+ E L Y +L +
Sbjct: 257 GVVPVDPLPGL-----ERGVRGMRLGRMPAAEREGCAPEMLAAYDR----ALDLVDRLGA 307
Query: 292 ELKNVMRLIQRYEFKNN----------HNEWI-ESVKPALDPDISAEIGEMLEISETVIE 340
E+ + + +F N HN I E LD D+ A I +S
Sbjct: 308 EIVDTRLPFRFVDFVNAAAIVNAEAYFHNGAIAEDFAAPLDEDVRARILSGASVSARDYL 367
Query: 341 NCKSIRNEMRSAISSLLKDDGILVTPTT 368
+ ++ +M+ A + L+TPTT
Sbjct: 368 RTRRLQQDMKRAFDRAMAGLDALLTPTT 395
>gi|332710185|ref|ZP_08430138.1| amidohydrolase, AtzE family [Moorea producens 3L]
gi|332351143|gb|EGJ30730.1| amidohydrolase, AtzE family [Moorea producens 3L]
Length = 464
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 91/153 (59%), Gaps = 1/153 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ FAV +L+DI G +T G A + SR +T V+ L + GA +G +D
Sbjct: 70 PGPLAGVPFAVKNLYDIAGLITLAGSKINAE-NPPVSRDATAVTKLKQAGAILVGALNMD 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP +++ GGSS G+A AVAA LV +LG DT G +RVP+A
Sbjct: 129 EYAYGFVTENSHYGATHNPHDLTRIAGGSSGGSAAAVAAGLVPITLGSDTNGSIRVPAAL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG G +P+YG +S G+ S SLD +G FAR
Sbjct: 189 CGTFGLKPTYGRLSRAGVFLFSASLDHIGPFAR 221
>gi|258542380|ref|YP_003187813.1| amidase [Acetobacter pasteurianus IFO 3283-01]
gi|384042301|ref|YP_005481045.1| amidase [Acetobacter pasteurianus IFO 3283-12]
gi|384050818|ref|YP_005477881.1| amidase [Acetobacter pasteurianus IFO 3283-03]
gi|384053926|ref|YP_005487020.1| amidase [Acetobacter pasteurianus IFO 3283-07]
gi|384057160|ref|YP_005489827.1| amidase [Acetobacter pasteurianus IFO 3283-22]
gi|384059801|ref|YP_005498929.1| amidase [Acetobacter pasteurianus IFO 3283-26]
gi|384063093|ref|YP_005483735.1| amidase [Acetobacter pasteurianus IFO 3283-32]
gi|384119169|ref|YP_005501793.1| amidase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633458|dbj|BAH99433.1| amidase [Acetobacter pasteurianus IFO 3283-01]
gi|256636517|dbj|BAI02486.1| amidase [Acetobacter pasteurianus IFO 3283-03]
gi|256639570|dbj|BAI05532.1| amidase [Acetobacter pasteurianus IFO 3283-07]
gi|256642626|dbj|BAI08581.1| amidase [Acetobacter pasteurianus IFO 3283-22]
gi|256645681|dbj|BAI11629.1| amidase [Acetobacter pasteurianus IFO 3283-26]
gi|256648734|dbj|BAI14675.1| amidase [Acetobacter pasteurianus IFO 3283-32]
gi|256651787|dbj|BAI17721.1| amidase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654778|dbj|BAI20705.1| amidase [Acetobacter pasteurianus IFO 3283-12]
Length = 451
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V DLFDI G+VT G R A + +T+V L GA + +DEF
Sbjct: 69 PLAGVPFGVKDLFDIAGHVTTAGSIVL-RNMPPAQKDATIVQRLKAAGAIPVATLNMDEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP ++M GGSS G+A AVAA + F+LG DT G +R+P++ CG
Sbjct: 128 AYGFATVNAHYGTTHNPHDLARMAGGSSGGSAAAVAAGFLPFALGSDTNGSIRIPASLCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+ G +P++G + G P S SLD VG FA
Sbjct: 188 VWGIKPTFGRLPRAGAYPFSASLDVVGSFA 217
>gi|363548416|sp|Q971U6.2|GATA_SULTO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|342306418|dbj|BAK54507.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit GatA
[Sulfolobus tokodaii str. 7]
Length = 472
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 174/379 (45%), Gaps = 42/379 (11%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+TV+ L + GA +GKT +DEFA ++ NP + PGGSS G+ A+AA
Sbjct: 95 ATVIEKLKQEGAVILGKTNMDEFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAA 154
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR------ 207
+VD +LG DT G +R P+A+ + G +PSYG VS G++ + SL+ +G A+
Sbjct: 155 GIVDIALGSDTGGSIRAPAAYNAVFGLKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLA 214
Query: 208 ---------DPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKST 258
DPK + H Q+P + +I + D E P VV + +
Sbjct: 215 LLYSIISGDDPKDATTI-HFEPQVPEKVELKDVKIAVLKDIVEASDKP---VVSIFNSTL 270
Query: 259 EKLFGR-QVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQ-RYEF-KNNHNEWIES 315
+KL ++K NLG Y + +P+ + N+ R RY + K + W E+
Sbjct: 271 DKLSSEGAIIKEVNLG-YAEYALPAYYIIAMSEAS-SNLARFDGVRYGYSKYSEGNWRET 328
Query: 316 VKPALDPDISAEIGEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTP 366
E+ + + ++ IR ++ + ++LK+ ++ +P
Sbjct: 329 FAKNRGEGFGIEVKRRILLGSFILSAGYYEEFYIKALKIRRLIKDNVDNILKEFDLIASP 388
Query: 367 TTAYPPPKLGGKEMLSEDYQNRAFSLLS-IASVSGCCQVTVPLGYYDKCPTSVSFIARHG 425
T PPK+G E++ + + A L + IA+++G ++ P G+Y+ P + + R+
Sbjct: 389 TMPILPPKIG--EVVEDPIKMYAMDLNTVIANLAGVPALSQPAGFYNNLPIGLQLMGRYL 446
Query: 426 GDRFLL------DTVQNMY 438
D +++ + V N+Y
Sbjct: 447 SDYYIMAISAKIEKVLNLY 465
>gi|15921546|ref|NP_377215.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
tokodaii str. 7]
Length = 476
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 174/379 (45%), Gaps = 42/379 (11%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+TV+ L + GA +GKT +DEFA ++ NP + PGGSS G+ A+AA
Sbjct: 99 ATVIEKLKQEGAVILGKTNMDEFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAA 158
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR------ 207
+VD +LG DT G +R P+A+ + G +PSYG VS G++ + SL+ +G A+
Sbjct: 159 GIVDIALGSDTGGSIRAPAAYNAVFGLKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLA 218
Query: 208 ---------DPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKST 258
DPK + H Q+P + +I + D E P VV + +
Sbjct: 219 LLYSIISGDDPKDATTI-HFEPQVPEKVELKDVKIAVLKDIVEASDKP---VVSIFNSTL 274
Query: 259 EKLFGR-QVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQ-RYEF-KNNHNEWIES 315
+KL ++K NLG Y + +P+ + N+ R RY + K + W E+
Sbjct: 275 DKLSSEGAIIKEVNLG-YAEYALPAYYIIAMSEAS-SNLARFDGVRYGYSKYSEGNWRET 332
Query: 316 VKPALDPDISAEIGEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTP 366
E+ + + ++ IR ++ + ++LK+ ++ +P
Sbjct: 333 FAKNRGEGFGIEVKRRILLGSFILSAGYYEEFYIKALKIRRLIKDNVDNILKEFDLIASP 392
Query: 367 TTAYPPPKLGGKEMLSEDYQNRAFSLLS-IASVSGCCQVTVPLGYYDKCPTSVSFIARHG 425
T PPK+G E++ + + A L + IA+++G ++ P G+Y+ P + + R+
Sbjct: 393 TMPILPPKIG--EVVEDPIKMYAMDLNTVIANLAGVPALSQPAGFYNNLPIGLQLMGRYL 450
Query: 426 GDRFLL------DTVQNMY 438
D +++ + V N+Y
Sbjct: 451 SDYYIMAISAKIEKVLNLY 469
>gi|393770985|ref|ZP_10359461.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Novosphingobium sp. Rr 2-17]
gi|392723641|gb|EIZ81030.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Novosphingobium sp. Rr 2-17]
Length = 450
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 160/385 (41%), Gaps = 40/385 (10%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
K P PL G+ F V DLFD+ G T G + A + + V+ L GA +
Sbjct: 62 KDPGPLAGVPFGVKDLFDVAGLPTTAGSTIYTDAAPALA-DAQAVARLCAAGAVLVATLN 120
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DEFAY N Y T NP PS++ GGSS G+A VAA L+ FSLG DT G VRVP+
Sbjct: 121 MDEFAYGFATINAAYGTTRNPHDPSRLSGGSSGGSAAVVAAGLLPFSLGSDTNGSVRVPA 180
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
+ G G +PS+ + G+ P + S D +G FA + + VL S R+
Sbjct: 181 SLTGTYGLKPSHADLPLGGVFPFAESFDDIGHFANSAADMTLIWEVL---------SGRE 231
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
F + +L GR EN E E
Sbjct: 232 AKCELQDFRI----------------ARLGGR---FREN-AEADQIAAIDAIAPAAPLIE 271
Query: 293 LKNVMR------LIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIR 346
L + R LI YE H E + + DP + + + + + ++ R
Sbjct: 272 LPEIARARSAAFLITAYEGGALHREALAADPMRFDPQVRDRLLAGALLPDELYAEAQAFR 331
Query: 347 NEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI----ASVSGCC 402
E R+ I +L+ D +L+ P T P + +L + + A + L I S +G
Sbjct: 332 AEYRARIEALVADYDVLLAPATPTVAPLVSDPRILIDGALSPARADLGIHTQPISFTGLP 391
Query: 403 QVTVPLGYYDKCPTSVSFIARHGGD 427
++VPL K P + I R GG+
Sbjct: 392 SLSVPLYRPGKLPIGLQLIGRPGGE 416
>gi|397167929|ref|ZP_10491368.1| amidohydrolase, AtzE family protein [Enterobacter radicincitans DSM
16656]
gi|396090370|gb|EJI87941.1| amidohydrolase, AtzE family protein [Enterobacter radicincitans DSM
16656]
Length = 465
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 90/160 (56%), Gaps = 6/160 (3%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
QPLPP L G+ +AV +LFD+ G+ T G E AA+ S V L + G
Sbjct: 66 QPLPP-----LAGIPYAVKNLFDVAGHTTLAG-AELFSQRPAATEDSRAVRQLQQAGGLL 119
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
G +D +AY N HY NP +++ GGSS G+A AVAA LV FSLG DT G
Sbjct: 120 SGMVNMDAYAYGFTTENSHYGATRNPHDLARIAGGSSGGSAAAVAAGLVHFSLGSDTNGS 179
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+RVP++ CGI G +P++G +S G P SLD +G FAR
Sbjct: 180 IRVPASLCGIFGLKPTFGRLSRAGTHPFVASLDHIGPFAR 219
>gi|398872498|ref|ZP_10627788.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM74]
gi|398202532|gb|EJM89374.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM74]
Length = 382
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G A+ D DI G+ T G +A AA + + VV +++ G +GKT + E A+
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFADA-PAAMKNAEVVDAILDAGWQIVGKTNLHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N TP NP AP ++PGGSSSG+A AVAA L D ++G DT G VRVP+A CGI G
Sbjct: 73 VTGINDWTGTPINPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+P+YG VS +G P+ +SLD VG FA+
Sbjct: 133 LKPTYGRVSRVGAHPLESSLDCVGPFAK 160
>gi|330505114|ref|YP_004381983.1| amidase [Pseudomonas mendocina NK-01]
gi|328919400|gb|AEB60231.1| amidase [Pseudomonas mendocina NK-01]
Length = 373
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 174/394 (44%), Gaps = 47/394 (11%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSA-----ASRTSTVVSTLVEGGATCIGKTVVD 114
G V D D+ G HP A + + A R + VV +++ G +GKT +
Sbjct: 17 GPRVMVKDTIDVAG------HPTRASSRALEHAPDAERHADVVQAMLDAGCQLLGKTSLH 70
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A+ G N T NP P ++PGGSSSG+A AVAA L DFSLG DT G VR+P+A
Sbjct: 71 ELAFGTTGLNAWIGTAENPRYPGRIPGGSSSGSAAAVAAGLCDFSLGTDTGGSVRIPAAC 130
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ G +PS+G VS G++P TSLD VG FA D L V + F I
Sbjct: 131 CGVFGLKPSFGRVSRAGVMPTQTSLDCVGPFAADIDTLITAMQV-IDPSFKVLPGVNGIR 189
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
I ++ + A VQ V+ + VL+ E +++ +P + +
Sbjct: 190 IG-----VVPVQAHPEVQAVVDA--------VLEASAF-ELYEAPLPGMPAAYDAG---- 231
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
+ +I R E N ++S + D++ + + + + + + R + +
Sbjct: 232 --LAVINR-ETWNACGHLVDS--GLVGADVAGRLLAARDTRDEALADAERCRAAFTAEVD 286
Query: 355 SLLKDDGILVTPTTA-YPPPKLGGKEMLSEDYQNRA----FSLLSIASVSGCCQVTVPLG 409
+ L IL PT YP ++++ RA + + +++G +++P
Sbjct: 287 AALAQYPILALPTMPDYP-------ALVADAADTRAAIGMTAFVRPFNLTGHPALSIPFE 339
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQE 443
K P + +A G D LL + + L++
Sbjct: 340 GASKLPVGLQLVAAKGADELLLAVARELLQRLEQ 373
>gi|403745331|ref|ZP_10954269.1| Amidase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121559|gb|EJY55852.1| Amidase [Alicyclobacillus hesperidum URH17-3-68]
Length = 464
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 179/404 (44%), Gaps = 30/404 (7%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P+A PL G+ ++ DL D T +G ++ + H + T+ V L A +GK
Sbjct: 75 PEALGPLAGVPVSIKDLIDTTFAPTTYGQAKY-QGHVPKA-TAVCVQRLQSAHAIIMGKA 132
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+ EFA+ + N H+ NP PS++ GGSS G+A +VAA + S+G DT G VR+P
Sbjct: 133 HLHEFAFGVTNENPHFGPARNPFNPSRITGGSSGGSAASVAAGMALVSVGTDTGGSVRIP 192
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPR 231
+A G++GF+P++GA+ G+ P++ SLD VG FA +L AA+ +
Sbjct: 193 AALTGVVGFKPTFGAIPTDGVYPLAPSLDHVGSFAT--SVLD-----------AARTAEV 239
Query: 232 QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS--------KVPSL 283
+A + + AD + + L E++ E+F + +V ++
Sbjct: 240 MAGLAPGTWSQVDAQADTAHPIRAGLVQSLV--DAYASEDVSEWFTAICTRLSRERVVAV 297
Query: 284 KGFHKTNGELKNVMRL-IQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
GF +GE + + I E H + + + D++A + ++S
Sbjct: 298 AGFVPVDGEEIAIHQGNILGAEAYATHAQALANHAADYGSDVAARLQAGRDVSAADYIAS 357
Query: 343 KSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIAS----V 398
+ + R+ + L+ L+ PT P P LG + + LL+ + +
Sbjct: 358 LTFQRAFRTTMDDFLQQYDCLLLPTVPVPAPPLGAETVTVRGKSEAVRPLLTRFTNPWNL 417
Query: 399 SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
SG +++P G D P + I G D L+ + +LQ
Sbjct: 418 SGLPAISIPAGNVDGLPMGLQIIGPRGQDAKLVHMAHIIETALQ 461
>gi|145590879|ref|YP_001152881.1| amidase [Pyrobaculum arsenaticum DSM 13514]
gi|145282647|gb|ABP50229.1| Amidase [Pyrobaculum arsenaticum DSM 13514]
Length = 401
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 140/317 (44%), Gaps = 31/317 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL AV D ++ G G P R A RT+ VV L+ GA IGKT + E A
Sbjct: 44 LCGLVVAVKDNIEVAGMPITNGAPYMRRM---ADRTAPVVRRLIAEGAVVIGKTNMHELA 100
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
N HY NP PS++ GGSS G+A AVA + D +G DT G VR+P+A CG+
Sbjct: 101 LGATNINPHYGPTRNPHDPSRITGGSSGGSAGAVAVGVADLGVGTDTGGSVRIPAALCGV 160
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV----GHVLLQLPFAAQ-RSPRQ 232
+G++P YG + G++P++ SLD VG+ R + L H+ G +LP + R
Sbjct: 161 VGYKPPYGKIPTEGVLPLAQSLDHVGFITRTVEELVHILSAAGWGPAELPQMKRFRFAVL 220
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
I +A++ K +K F + V E++G D G
Sbjct: 221 IGVAENT----------------KHVDKAFWKAVSVLESIGGIRDE-------VFIDGGR 257
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
I E N+ ++ S + D++A + + K ++ E
Sbjct: 258 YGAARAAILLSEAAANYYHYLRSAAEHMGRDVAALLSAGAALPAVAYVTAKRVKEEATRF 317
Query: 353 ISSLLKDDGILVTPTTA 369
SL K ++ TPTTA
Sbjct: 318 FESLFKKYDVVATPTTA 334
>gi|187924147|ref|YP_001895789.1| amidase [Burkholderia phytofirmans PsJN]
gi|187715341|gb|ACD16565.1| Amidase [Burkholderia phytofirmans PsJN]
Length = 374
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 91/153 (59%), Gaps = 1/153 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G S A+ D DI GY T A T A + + VV L+ G +GK + E A+
Sbjct: 14 GPSIAIKDTIDIAGYATTAASRALADT-PPAQQHAEVVERLIASGWHIVGKANMHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N + TP NP +++PGGSSSG+A AV L D +LG DT G +R P+A CG++G
Sbjct: 73 MTGINDYTGTPQNPQDAARIPGGSSSGSAAAVGLKLADAALGTDTGGSIRGPAACCGVIG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
+P++G VS +G+ P ++LD VG FARD ++L
Sbjct: 133 LKPTFGRVSRLGVAPRESTLDCVGPFARDMRML 165
>gi|398878708|ref|ZP_10633819.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM67]
gi|398198891|gb|EJM85842.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM67]
Length = 382
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G A+ D DI G+ T G +A A R + VV +++ G +GKT + E A+
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFADAEPAL-RNADVVDAILDAGWQIVGKTNMHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N TP NP AP ++PGGSSSG+A AVAA L D ++G DT G VRVP+A CGI G
Sbjct: 73 VTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+P+YG VS +G P+++SLD VG FA D
Sbjct: 133 LKPTYGRVSRVGAHPLASSLDCVGPFAAD 161
>gi|309780657|ref|ZP_07675399.1| amidase family protein [Ralstonia sp. 5_7_47FAA]
gi|349617268|ref|ZP_08896383.1| hypothetical protein HMPREF0989_04629 [Ralstonia sp. 5_2_56FAA]
gi|308920580|gb|EFP66235.1| amidase family protein [Ralstonia sp. 5_7_47FAA]
gi|348610543|gb|EGY60232.1| hypothetical protein HMPREF0989_04629 [Ralstonia sp. 5_2_56FAA]
Length = 453
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G VT G A A+ + V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVTAAGSRALA-DQPRATADAAAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+PSAF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
C + GF+P+ V G +P+STSLD+ G A
Sbjct: 189 CNLTGFKPTARRVPMTGGVPLSTSLDSGGPLA 220
>gi|295688510|ref|YP_003592203.1| amidohydrolase, AtzE family [Caulobacter segnis ATCC 21756]
gi|295430413|gb|ADG09585.1| amidohydrolase, AtzE family [Caulobacter segnis ATCC 21756]
Length = 464
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 150/345 (43%), Gaps = 47/345 (13%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FAV +LFDIE T G + R + +R +T+V L GA +G +DEFA
Sbjct: 69 LAGVPFAVKNLFDIESLPTLAGS-KIRREAAPPTRDATLVQRLTAAGAILVGALNMDEFA 127
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N H NP P+++ GGSS G+A AVAA LV +LG DT G +R+P+ CG+
Sbjct: 128 YGFVTENAHDGPVRNPHDPTRIAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRIPAGLCGV 187
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
G +P+YG +S G+ P SLD VG FA RS ++ +A
Sbjct: 188 FGLKPTYGRLSRQGVFPFVESLDHVGPFA---------------------RSVEELALA- 225
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGR------QVLKHENLGEYF-DSKVPS-LKGFHKT 289
+++L+ P + ++ E L GR Q L+ LG +F P L +
Sbjct: 226 --YDVLQGPDREGDPICVREAEPLTGRLDALAEQPLRVGVLGGWFQQGAFPDVLAALDRV 283
Query: 290 NGELKNVMRLI--------------QRYEFKNNHNEWIESVKPALDPDISAEIGEMLEIS 335
L +I +E H++ + DP + + +
Sbjct: 284 AQALSADTDVILSGAQAARAAAFCLTAFEGGELHHDDLAVRAMDYDPAVRDRLLAGALLP 343
Query: 336 ETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEM 380
+ V E + R R ++ + + +L+ P + P P +G M
Sbjct: 344 QGVAEAARRYRTIFRDEVAKVFQRYDVLLAPASVCPAPPIGQATM 388
>gi|365883609|ref|ZP_09422745.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 375]
gi|365287897|emb|CCD95276.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 375]
Length = 475
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFD++G T G R AA R + ++ + GA +G + E+
Sbjct: 74 PLAGVPFAVKNLFDVQGLPTRAGS-RINRDRPAAMRDAALIERMEAAGAVLVGALNMGEY 132
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY G N H NP P++M GGSS G+ AV LV +LG DT G +RVPS+FCG
Sbjct: 133 AYDFTGENVHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCG 192
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
I G +P+YG +S P SLD +G FAR
Sbjct: 193 IFGLKPTYGRLSRARSFPFVMSLDHLGPFAR 223
>gi|429218126|ref|YP_007179770.1| amidase [Deinococcus peraridilitoris DSM 19664]
gi|429128989|gb|AFZ66004.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Deinococcus peraridilitoris DSM 19664]
Length = 386
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 101/172 (58%), Gaps = 9/172 (5%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT--STVVSTLVEG 103
P +PL +AP PL+GL+F+ DL+ I G+ P A T + S +V L+E
Sbjct: 13 PSEPLRARAPGPLSGLTFSAKDLYGIPGW------PLRAGTQAPLPNVGESLLVRQLLER 66
Query: 104 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGID 163
GA IG T + E A I G N T NP P+++ GGSS GAA +VA VDF+LG D
Sbjct: 67 GADLIGSTQLHEVALGIIGFNAFGGT-RNPLDPARIAGGSSGGAAASVALGEVDFALGTD 125
Query: 164 TVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV 215
T G +RVP++FCG++GF+P++G S G++P+S + D G AR ++ V
Sbjct: 126 TGGSIRVPASFCGVVGFKPTFGLYSTEGVLPLSQTCDHAGPLARTVGVIARV 177
>gi|412339618|ref|YP_006968373.1| amidase [Bordetella bronchiseptica 253]
gi|408769452|emb|CCJ54229.1| putative amidase [Bordetella bronchiseptica 253]
Length = 461
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYV--TGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
P A PL G+ A D+F + G V G HP W A R +TV+ L G+ +
Sbjct: 54 PPASLPLAGVGLAHKDIFVLPGRVPECGARHP-W---PDAPVRAATVIRRLAAAGSRPLA 109
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
+ E A G N Y P NP GGSSSG+AVAVAA L SLG DT G VR
Sbjct: 110 ALAMAEHASGATGENPRYPLPRNPLDADAAVGGSSSGSAVAVAAGLCYGSLGTDTAGSVR 169
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+P+A CG++G P+ G + G+ P++ LDTVG AR
Sbjct: 170 IPAATCGVVGLMPTRGLLPGDGVAPLAGELDTVGVLAR 207
>gi|78486134|ref|YP_392059.1| amidase [Thiomicrospira crunogena XCL-2]
gi|78364420|gb|ABB42385.1| Amidase family protein [Thiomicrospira crunogena XCL-2]
Length = 598
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 191/430 (44%), Gaps = 41/430 (9%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
+Q+ +F+ KL+ P PL G+ F + D D+EG T E+A T
Sbjct: 45 EQEIDSFVSKLESTKPNS-------LPLWGIPFVIKDNIDLEGIPTTAACQEFAYT---P 94
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+++TVV L+E GA + KT +D+FA + GT Y N + GGSSSG+AVA
Sbjct: 95 EKSATVVQLLIEAGAIPLAKTNMDQFATGLVGTRSPYGVCHNAFDFDMISGGSSSGSAVA 154
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
++ L FSLG DT G RVP+AF ++G +PS G +S G++P S D V FA + +
Sbjct: 155 LSLGLCSFSLGTDTAGSGRVPAAFNNLVGLKPSKGLLSTSGVVPAVRSQDVVSIFALNAQ 214
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCF---ELLKIPADRVVQVVIKS-TEKLFGRQV 266
V Q S ++I + + ++ IP ++ S E F
Sbjct: 215 DAYAVFDTAAQPDSTDDFSRQEIALTPPAWPTKPVIGIPDANSLRFNDDSEAEANFRETT 274
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISA 326
K + LG F+ K + + +T L + + +RY + + ES ALDP +
Sbjct: 275 KKLKTLG--FEIKEIDFQPWLETAKLLYDGAWVAERYAAIESFFDANES---ALDPTVGK 329
Query: 327 EIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSED-- 384
I +S T + ++ ++ + L+TPTT P + E + D
Sbjct: 330 IIAGARNLSATDAYKGSYALQKAQNETQTIWETVDCLLTPTT----PTVFSIEEVESDPV 385
Query: 385 --------YQNRAFSLLSIASVSGCCQVTVPLGYY-DKCPTSVSFIARHGGDRFLLDTVQ 435
Y N +LL A+V+ +P G+ D+ PT V+ A G DR LL
Sbjct: 386 GLNSLLGTYTNF-MNLLDYAAVA------MPTGFRADQMPTGVTLFAPAGSDRKLLQLTD 438
Query: 436 NMYASLQEQA 445
++ + + A
Sbjct: 439 ELHGNFMDIA 448
>gi|170737611|ref|YP_001778871.1| amidase [Burkholderia cenocepacia MC0-3]
gi|169819799|gb|ACA94381.1| Amidase [Burkholderia cenocepacia MC0-3]
Length = 446
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 161/397 (40%), Gaps = 23/397 (5%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V D+ GY T G P A A + +T+V+ + GA IG T +D
Sbjct: 64 PGPLAGVPFLVKWNIDVAGYTTVAGSPARAALPPAVA-DATIVARMCAAGAIPIGATQMD 122
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A G N +Y PA P++M GGSSSG+A AVAA V +LG DT G +R P+A
Sbjct: 123 ELACGATGVNPYYGAVRLPADPTRMTGGSSSGSAAAVAAGYVPLALGSDTNGSIRAPAAL 182
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ GFRP G +S G +P + SLDTVG FA D L + L + +SPR
Sbjct: 183 CGVWGFRPGDGQLSRAGCLPYADSLDTVGGFANDVDDLAVLYDTLRETHAPRAQSPR--- 239
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
D L+ V V+ E + ++ ++
Sbjct: 240 ---DPAAPLR------VAVLTGDFETHADADAQRAVRRAAARLRADETVAVASDEVAHVR 290
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAIS 354
+I E H+ +++ + + + + L S+T + R R+ I+
Sbjct: 291 EAALVISNVELARAHHGLVDAPAALVSEHLRSRLAAGLATSDTAYRRALAHRAAWRARIA 350
Query: 355 SLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFS-------LLSIASVSGCCQVTVP 407
L +L+ T P++ + D A L S +G V+ P
Sbjct: 351 VLFARYDLLLAAATPCAAPRITDATV---DVNGVALEPAKTLGLLTQPISFAGLPVVSAP 407
Query: 408 LGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+ P V I GGD D + A+ +
Sbjct: 408 CFASGELPVGVQLIGGPGGDAVCFDAARQFSAAWADM 444
>gi|163855151|ref|YP_001629449.1| amidase [Bordetella petrii DSM 12804]
gi|163258879|emb|CAP41178.1| putative amidase [Bordetella petrii]
Length = 538
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ + D+FD +G V G+G P R + A +TVV+ L GA +G + EF
Sbjct: 128 PLHGMPVGIKDMFDRQGRVAGWGTP-LRRDSAPADADATVVARLRAAGAVVLGVQHMAEF 186
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A S G N Y NP ++ GGSSSGAA++VAA V ++G DT G VR+P+A CG
Sbjct: 187 AMSPTGWNASYGPGRNPWDTGRVSGGSSSGAAMSVAAGHVPLAIGSDTGGSVRLPAALCG 246
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----------LQLPFAA 226
+ G +P+ +S G +P+S SLD +G A ++ H L L P A
Sbjct: 247 LTGLKPTQHRISVAGAMPLSPSLDCIGPLAWSAELCGHACRALAGADAADPSCLHAPVVA 306
Query: 227 QRSPRQIIIA 236
+ PR++ +A
Sbjct: 307 GQPPRRLRVA 316
>gi|241662116|ref|YP_002980476.1| amidase [Ralstonia pickettii 12D]
gi|240864143|gb|ACS61804.1| Amidase [Ralstonia pickettii 12D]
Length = 453
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L GL ++ DLFD+ G VT G A A+ + V+ L GA +G+T +
Sbjct: 70 PSLLAGLPVSIKDLFDVAGQVTAAGSRALA-DQPRATADAAAVARLRAAGAVLLGRTNMS 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N HY TP PA ++ GGS+SG AV VA + +LG DT G +R+PSAF
Sbjct: 129 EFAFSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAF 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
C + GF+P+ V G +P+STSLD+ G A
Sbjct: 189 CNLTGFKPTARRVPMTGGVPLSTSLDSGGPLA 220
>gi|453084333|gb|EMF12377.1| amidase signature enzyme, partial [Mycosphaerella populorum SO2202]
Length = 602
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 18/273 (6%)
Query: 49 PLP-------PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLV 101
PLP P PL+G V D+FD+ G T +++ + AA T+ VV L+
Sbjct: 165 PLPSRHYFDQPSDEKPLSGKRIGVKDIFDLRGVPTSASSRDYSAFYGAADSTAPVVQRLI 224
Query: 102 EGGATCIGKTVVDEFAYSINGTNKH----YDTPTNPAAPSQMPGGSSSGAAVAVAA--DL 155
+ GA +GKT +FA +G H + P NP M SS + AA D
Sbjct: 225 DAGAVIVGKTKTAQFA---SGEYAHDWVDFLCPFNPRGDGYMEPDCSSSGSAVAAAGYDW 281
Query: 156 VDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV 215
+DF+LG DT+G + P+A G+ G RP++G GI+P+S+ LDT+G FAR LR
Sbjct: 282 LDFALGTDTLGSIVGPAALQGVFGIRPTHGTTDMTGILPVSSLLDTIGPFARSITELRLF 341
Query: 216 GHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEY 275
V + + SP +++ + F+ P +++ I EK + +L E
Sbjct: 342 APVWYEDHHMSSDSPIRLLCPTEYFDAWPAPKRQIMNAFIDDMEKHLSVTRTAY-DLHEE 400
Query: 276 FDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNN 308
+ + P L V+ IQ Y+ +N
Sbjct: 401 WKLRAPD-DCARSLETHLDKVLAYIQLYDSYHN 432
>gi|403412526|emb|CCL99226.1| predicted protein [Fibroporia radiculosa]
Length = 660
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 187/440 (42%), Gaps = 60/440 (13%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P A P G V D++D++G TG G+ + + ++T+ V L++GG +GKT
Sbjct: 217 PTAEKPFAGYRLGVKDIYDVQGLHTGCGNRAYWALYPPKTQTAPAVQRLLDGGMVLVGKT 276
Query: 112 VVDEFAYSINGTNKHYD--TPTNPAAPS-QMPGGSSSGAAVAVAA-DLVDFSLGIDTVGG 167
+FA T+ D P NP Q SS+G+ A+AA +DF++G DT G
Sbjct: 277 KSSQFANGEVATDDWVDLHAPYNPRGDGYQDGSSSSTGSGTAMAAYSWLDFAIGSDTGGS 336
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+R PS G+ G RPS+GA+S ++P+S LDT+G F+RD K+ GH Q +
Sbjct: 337 MRGPSGANGVFGNRPSHGAISTDDVMPLSPELDTLGIFSRDAKLWTQAGHWWYQNFTSYS 396
Query: 228 RSPRQIIIADDCF---ELLKIPADRVV----QVVIKSTEKLFGRQVLKHENLGEYFDSKV 280
+ P++I+ D F L + PA V I E G NL +DS
Sbjct: 397 QYPKKILFPVDSFGSSYLAEPPAPGTVGATFNAFITQLEGFLG-TTRTEINLTTMWDSTK 455
Query: 281 PS-----LKGF-HKTNGELKNVMRLIQRYE-FKNNHNEWIESVKPALDPD--ISAEIGEM 331
PS L+ F + T L ++ E F ++ KP +DP + G
Sbjct: 456 PSNVSSTLREFLNTTYPTLITTDQIALLAEPFFRDYAAATGGRKPFIDPAPLTRWDYGWS 515
Query: 332 LEIS---ETVIENCKSIRNEMRSAISSLLKD---DGILVTPTT--------AYPPPKLGG 377
L S E ++E + + + + D D I + P + AYP P
Sbjct: 516 LPASAHNEAIVEKTTFMDWFQKEIVPGGVPDTCSDAIFLYPQSSGGTTYRNAYPGPPT-- 573
Query: 378 KEMLSEDYQNRAFSLLSIASVSGCCQVTVPL----------GYYDKCPTSVSFIARHGGD 427
FS IA + + VP+ G + P ++SFI D
Sbjct: 574 --------TPFGFSSGRIAVFAETPDMVVPVGEAAYNSTITGQIEYLPVTLSFITAKNCD 625
Query: 428 RFLLDTVQNMYASLQEQADI 447
L N++A+LQ+ AD+
Sbjct: 626 LMLF----NLFAALQD-ADV 640
>gi|170745432|ref|YP_001766889.1| amidase [Methylobacterium radiotolerans JCM 2831]
gi|170659033|gb|ACB28087.1| Amidase [Methylobacterium radiotolerans JCM 2831]
Length = 456
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL+F V D + G T P ++ + ++ VS L E GA +GK +D+F
Sbjct: 70 PLLGLAFCVKDNLHVAGMETTCNCPAFSIWPA---ESAPAVSRLEEAGAVLVGKNTMDQF 126
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A +NGT N P+ +PGGSSSG+AVAVA LV FSLG DT G RVP+A G
Sbjct: 127 ATGLNGTRSPEPLCRNAVDPAYIPGGSSSGSAVAVARGLVSFSLGSDTGGSGRVPAACNG 186
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +P+ G VS G++ S LD V FA
Sbjct: 187 IVGLKPTLGLVSTRGLVLNSRFLDCVPVFA 216
>gi|427422336|ref|ZP_18912519.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Leptolyngbya sp. PCC 7375]
gi|425758213|gb|EKU99067.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Leptolyngbya sp. PCC 7375]
Length = 467
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 182/413 (44%), Gaps = 34/413 (8%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDI G VT G + + +S A++ +T V+ L GA +G +DE+
Sbjct: 72 PLAGVPFAVKNLFDIAGTVTLAGS-KINQANSPATQDATAVARLKAAGAILVGALNMDEY 130
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N+HY NP +++ GGSS G+A AVAA LV +LG DT G +RVP+A CG
Sbjct: 131 AYGFVTVNEHYGATPNPHDLTRISGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPAALCG 190
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
+ G +P+YG +S G S+SLD +G F R + + V LQ P A R I
Sbjct: 191 VYGLKPTYGRLSRAGAFLFSSSLDHIGPFGRSVADVANTFQV-LQGPDA-----RDPICT 244
Query: 237 DDCFELLKIPADRV-VQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKT-----N 290
+ +L + DR +++ I + G + + D KV + +T
Sbjct: 245 NRPEIILDLSGDRAGIRIAIATDHFAKGMA----PTVAQALD-KVATALNVTRTMTIPEA 299
Query: 291 GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLE---ISETVIENCKSIRN 347
+ LI E H +++ D SA L I + + R
Sbjct: 300 ARARAAAYLITASEGSQLHLSRLQTQPQDFD---SATCDRFLAGALIPSSWYIQAQRFRR 356
Query: 348 EMRSAISSLLKDDGILVTPTTAYPPP-------KLGGKEMLSEDYQNRAFSLLSIASVSG 400
R + L K ++V PTT P P +L G+ +L + LS G
Sbjct: 357 WYRDQVRELFKTVDLIVAPTTPCPAPLIEQTTMELDGETVLVRPHLGFYTQPLSFI---G 413
Query: 401 CCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKL 453
++VP+ + P V IAR ++ L + + QA +A S L
Sbjct: 414 LPVLSVPVHLPGELPVGVQLIARPYDEQSLFTAAVALEQAGITQAPLAMTSAL 466
>gi|17149821|gb|AAL35976.1| half-amidase [Cupriavidus necator]
Length = 478
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ + DLFD+ G T R+ A + VV+ G C+GKT + EF
Sbjct: 72 PLDGVPISWKDLFDVRGTPTTAAS-ALLRSAPPAPADAPVVARAAAAGMVCLGKTNLSEF 130
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N + TP NP ++ PGGSSSGAA+AV ++G DT G VR+P+AF
Sbjct: 131 AYSGLGLNPGFGTPANPRLGGRARAPGGSSSGAALAVVQGCGPLAMGTDTAGSVRIPAAF 190
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
G++GFR S G G+ +S SLDT+G A
Sbjct: 191 NGLVGFRASRGRYPMQGVFALSPSLDTLGPLA 222
>gi|319793306|ref|YP_004154946.1| amidase [Variovorax paradoxus EPS]
gi|315595769|gb|ADU36835.1| Amidase [Variovorax paradoxus EPS]
Length = 488
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ DLFDIEG T G + A +T+V+ G CIGKT + EF
Sbjct: 82 PLDGVPLTWKDLFDIEGTPTTAGS-GLLAHAAPAEADATLVAHAEAAGMVCIGKTNLSEF 140
Query: 117 AYSINGTNKHYDTPTNPA--APSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N+ + TP NPA ++ PGGSSSGAA+AVA D+ +G DT G VRVP+AF
Sbjct: 141 AYSGLGLNQAFGTPVNPALGVRARAPGGSSSGAALAVALDVAPIGIGTDTAGSVRVPAAF 200
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++G+R S + G+ ++ SLDTVG AR
Sbjct: 201 NGLIGYRASRHRYAMTGVFALAPSLDTVGPLAR 233
>gi|186474753|ref|YP_001863724.1| amidase [Burkholderia phymatum STM815]
gi|184198712|gb|ACC76674.1| Amidase [Burkholderia phymatum STM815]
Length = 447
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 169/400 (42%), Gaps = 37/400 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ + D+F EG T G A + + VV L E GA +GK + EFA
Sbjct: 72 LDGIPYVAKDVFKTEGIRTTAGSKVLAEHYP--QEDAGVVRKLAEAGAVLVGKANMHEFA 129
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y G N+ T NP ++ GGSS G+A AVAA +V F+LG DT G VRVP+A CG+
Sbjct: 130 YGATGENQFTGTTVNPWDQRRLAGGSSGGSAAAVAAGIVPFALGTDTGGSVRVPAALCGV 189
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
GF+P++G + G+IP +LD VG A + + V L L Q+ +
Sbjct: 190 TGFKPTFGLLDSTGVIPFCWTLDHVGIIAGNADDVSVVIDSLTDL---------QVFRTN 240
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG----FHKTN--- 290
L+I R G L + ++ V L+ FH+ +
Sbjct: 241 GSLHSLRIGIPR-------------GWTSLLEPGVRAGYELVVAVLRASGATFHEIDLPE 287
Query: 291 -GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
E + V IQ E H+ I S PD+ ++S C+ + +
Sbjct: 288 HAESRTVSLTIQLAEALAYHSPLIASSGAQYGPDVRGGFVLGQQLSAESYVQCQRLLSAY 347
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ---NRAFSLL-SIASVSGCCQVT 405
R++ + + ++TPT P+ G + D A +L S ++ G V
Sbjct: 348 RASFTRHFETIDAILTPTCPVVAPETGSTRIPVGDQLLPIGNALTLFTSFFNLVGAPAVA 407
Query: 406 VPLGYYDK-CPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+P G DK P SV I G D +L+ +++ L +
Sbjct: 408 LPAGTDDKGLPVSVQLIGAPGKDIAILELARHLEQELARR 447
>gi|358384906|gb|EHK22503.1| hypothetical protein TRIVIDRAFT_2199, partial [Trichoderma virens
Gv29-8]
Length = 600
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 186/424 (43%), Gaps = 47/424 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ V DLFD++G G+ W + AA++T+ + L++ GA +G+ + +F
Sbjct: 172 PLAGVRIGVKDLFDLKGVRKSNGNRAWYHFYPAANKTAHAIYNLIDAGAVIVGQQIPAQF 231
Query: 117 AYSINGTNK--HYDTPTNPAAP--SQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
A + T Y P NP + G S+ G A A + +D ++G DT G +R P+
Sbjct: 232 AQGGSPTADWIDYHAPFNPRGDGYNDAGGSSTGGGASIAAYEWLDLAVGTDTGGSIRGPA 291
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ----- 227
A G G RPS+G+VS G + +S ++DT+G+ RDP + L + + +
Sbjct: 292 AMGGSFGNRPSWGSVSADGCMSLSPTMDTIGFITRDPVLWDAAQAALYKSKYTSYAGDKT 351
Query: 228 -RSPRQIIIADDCFELLKIPADRVVQVVIKSTEK---LFGRQVLKHENLGEYFDSKVPSL 283
+ P+++ +L P D + QV++ +K L G ++ E + + +D P
Sbjct: 352 PKWPKKVYHIGGWGDL--APLDDLTQVLVNVRDKIIELTGSELHVTE-IADEWDKTRPKA 408
Query: 284 KGFHKTNGEL---------KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
+ L K+V+RL+ R F +++ + PA+DP + +
Sbjct: 409 AQNATIDEVLDRVYVTKVQKDVVRLV-REPFYADYSAKHDGALPAVDPANTIRWDFADQT 467
Query: 335 SETVIENCKSIRNEMRSAI-SSLLKDD------GILVTPT-TAYPPPKLGGKEMLSEDYQ 386
SE+ + ++ R R + S LL D I++ T A P P+ L
Sbjct: 468 SESDLAAAEANRTMFRDWLQSELLTPDEETCSSAIIIWATYLADPTPR---NVYLDPPKV 524
Query: 387 NRAFSLLSIASVSGCCQVTVPLGYYD----------KCPTSVSFIARHGGDRFLLDTVQN 436
N F L IA + T+P+G ++ K P + F+A G D L Q
Sbjct: 525 NPKFYLSRIAPFAEVPDFTMPVGEFEVSSSITNHTQKLPLGLGFMAAKGCDGLLTRLAQE 584
Query: 437 MYAS 440
M S
Sbjct: 585 MVKS 588
>gi|427731640|ref|YP_007077877.1| amidohydrolase, AtzE family [Nostoc sp. PCC 7524]
gi|427367559|gb|AFY50280.1| amidohydrolase, AtzE family [Nostoc sp. PCC 7524]
Length = 469
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 166/384 (43%), Gaps = 50/384 (13%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ FAV +LFDI G T G A + A++ +T ++ L + GA +G +D
Sbjct: 64 PGSLAGVPFAVKNLFDIAGLTTLAGSKINAE-NPPATQDATAITKLKQAGAILVGTLNMD 122
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP ++ GGSS G+A AVAA LV F+LG DT G +RVP+
Sbjct: 123 EYAYGFVTENFHYGATHNPHDLERVAGGSSGGSAAAVAAGLVPFTLGSDTNGSIRVPAGL 182
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL----PFAAQRSP 230
CG+ GF+P+YG +S G+ S+SLD +G FAR + + V +L P ++R P
Sbjct: 183 CGVFGFKPTYGRLSRAGVALFSSSLDHIGPFARSVRDIATVFDILQGEDNCDPVCSKRPP 242
Query: 231 R-------------QIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFD 277
++ IA D F P + V K E L ++ EY
Sbjct: 243 ELVLPQLNQDISGIRVAIAGDYFATGADP--EALAAVQKVAEAL---------DVDEYV- 290
Query: 278 SKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISET 337
+L H+ + +I E N H + + S DP I
Sbjct: 291 ----TLPEAHRA----RAAAFVITACEGANLHLDKLRSRPQDFDPATRDRFLAGALIPNY 342
Query: 338 VIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPP-------KLGGKEMLSEDY----- 385
+ R R I + + +++ PTT P L G+E+L +
Sbjct: 343 WYLQAQRFRRWYRDCIREVFQQVDVILAPTTPISAPLINQQTMTLDGEEILVRPHLGLFT 402
Query: 386 QNRAFSLLSIASVSGCCQVTVPLG 409
Q +F L + SV T+PLG
Sbjct: 403 QPLSFIGLPVLSVPIQRSNTLPLG 426
>gi|407711747|ref|YP_006836520.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Burkholderia phenoliruptrix BR3459a]
gi|407240430|gb|AFT90627.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Burkholderia phenoliruptrix BR3459a]
Length = 447
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 170/400 (42%), Gaps = 37/400 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ + D+F EG T G A + + VV L E GA +GK + EFA
Sbjct: 72 LDGIPYVAKDVFKTEGIRTTAGSKVLAEHYP--QEDAGVVRKLAEAGAVLVGKANMHEFA 129
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y G N+ T NP ++ GGSS G+A AVAA +V F+LG DT G VRVP+A CG+
Sbjct: 130 YGATGENQFTGTTVNPWDQRRLAGGSSGGSAAAVAAGIVPFALGTDTGGSVRVPAALCGV 189
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIAD 237
GF+P++G + G+IP +LD VG A + + V L L Q+ +
Sbjct: 190 TGFKPTFGLLDSTGVIPFCWTLDHVGIIAGNADDVSVVIDSLTDL---------QVFRTN 240
Query: 238 DCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG----FHKTN--- 290
L+I R G L + ++ V L+ FH+ +
Sbjct: 241 GSLHSLRIGIPR-------------GWTSLLEPGVRAGYELVVAVLRASGATFHEIDLPE 287
Query: 291 -GELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
E + V IQ E H+ I S PD+ + ++S C+ + +
Sbjct: 288 HAESRTVSLTIQLAEALAYHSPLIASSGEQYGPDVRSGFVLGQQLSAESYVQCQRLLSAY 347
Query: 350 RSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQ---NRAFSLL-SIASVSGCCQVT 405
R++ + + ++TPT P+ G + D A +L S ++ G V
Sbjct: 348 RASFTRHFETIDAILTPTCPVVAPETGSTRIPVGDQLLPIGNALTLFTSFFNLVGAPAVA 407
Query: 406 VPLGYYDK-CPTSVSFIARHGGDRFLLDTVQNMYASLQEQ 444
+P G DK P SV I G D +L+ +++ L +
Sbjct: 408 LPAGTDDKGLPVSVQLIGAPGKDIAILELARHLEQELARR 447
>gi|238894806|ref|YP_002919540.1| amidase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|402780713|ref|YP_006636259.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|238547122|dbj|BAH63473.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402541616|gb|AFQ65765.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Klebsiella
pneumoniae subsp. pneumoniae 1084]
Length = 465
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 165/395 (41%), Gaps = 45/395 (11%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L G+ +AV +LFD+ G+ T G E A+ S V L GA
Sbjct: 66 RPLPP-----LAGIPYAVKNLFDVAGHTTLAG-AELLSDRPPAASDSWAVRQLHSAGALL 119
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
G +D +AY N HY NP S++ GGSS G+A AVAA LV FSLG DT G
Sbjct: 120 SGMLNMDAYAYGFTTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVHFSLGSDTNGS 179
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+RVP++ CGI G +P++G +S G P SLD +G FAR L V L
Sbjct: 180 IRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDAL------QG 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF------DSKVP 281
R P ADD AD+ + E+ G + L+ LG YF D++
Sbjct: 234 RDP-----ADD------FQADKASERTGNMLER--GLEGLRCARLGGYFTTWCDDDARAA 280
Query: 282 SLKGFH--KTNGELK--------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
+ H + EL+ + +I E N + + +P +
Sbjct: 281 VERVAHALSADSELQFADAALARSAAFIISASEGGNQYLTDLRHSPERFEPHSRERLLAG 340
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRA 389
I + R R A+ SL +L+ P T +G +EM+ + RA
Sbjct: 341 AMIPSAWYLQAQRFRRHARQAMKSLFSQADVLIAPATPCSATPIGAEEMVINGQPLPVRA 400
Query: 390 FSLLSIASVS--GCCQVTVPLGYYDKCPTSVSFIA 422
+ +S G VTVPL P + IA
Sbjct: 401 SMGMLTQPISFLGLPVVTVPLRTASGKPIGLQLIA 435
>gi|58039746|ref|YP_191710.1| amidase [Gluconobacter oxydans 621H]
gi|58002160|gb|AAW61054.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconobacter
oxydans 621H]
Length = 395
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F + DLFD+ G +T G A A++ +T+V+ ++ GGA I T +D
Sbjct: 19 PGPLAGVPFGIKDLFDVRGEITTAGSKVLA-NDPPATQDATLVAHMIAGGAIPIALTNMD 77
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFAY N HY NP AP ++ GGSS G+A VAA + LG DT G +RVP++
Sbjct: 78 EFAYGFATINAHYGNTRNPHAPERLAGGSSGGSAAGVAARMFSIGLGSDTNGSIRVPASL 137
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
CGI G R + G +S G P SLDTVG FA
Sbjct: 138 CGIWGLRATQGRLSVEGSYPFVPSLDTVGPFA 169
>gi|167566815|ref|ZP_02359731.1| pyrazinamidase/nicotinamidase [Burkholderia oklahomensis EO147]
Length = 375
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 150/343 (43%), Gaps = 38/343 (11%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G + A+ D DI G+ T G A R + VV +++ G GK + E A+
Sbjct: 14 GPTIAIKDTIDIAGHRT-TGASRALADAPPAERHAEVVERVLDAGWRIAGKANMHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N + TP NP P+++PGGSSSG+A V VD +LG DT G +R P+A CG++G
Sbjct: 73 MTGINDYTGTPVNPQDPARIPGGSSSGSASLVGLGRVDAALGTDTGGSIRGPAACCGVIG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP-----RQII 234
+P++G VS G+ P+ T+LD VG FARD L V L A+ SP R I
Sbjct: 133 LKPTFGRVSRRGVAPVDTTLDCVGPFARDVATLVAVMAALAPGFDASVASPQLAACRVAI 192
Query: 235 IADDCFELLKIPADRVV-QVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+ D ++ +R Q +T L+ ++L FD+ G N E
Sbjct: 193 VETDSDAAIRAAVERAAGQADCAATP-------LRLDDLAAAFDA------GLAVINAET 239
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
++ S K L DI A + + ++ + +R + +
Sbjct: 240 SRAF------------GRFVGSGK--LGADIDARLRVAATTTADQLDTAERVRARFTAQV 285
Query: 354 SSLLKDDGILVTPTTAYPPPKL----GGKEMLSEDYQNRAFSL 392
L +LV PT P L GG +++ R F+L
Sbjct: 286 DRALDTADVLVLPTLPALPITLDEARGGASVIAMSSLIRPFNL 328
>gi|402826412|ref|ZP_10875611.1| amidase [Sphingomonas sp. LH128]
gi|402260047|gb|EJU10211.1| amidase [Sphingomonas sp. LH128]
Length = 448
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V+DLFD+ G +T G R + ASR S ++ L GA +G +D
Sbjct: 68 PGPLAGVPFGVADLFDVAGEITTAGS-RTRRNAAFASRDSKAIALLEAAGAVLVGTQNMD 126
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EF Y N Y T NP PS++ GG++ G+AVAVA +V SL DT G +RVP+
Sbjct: 127 EFGYGFVTMNAEYGTTRNPHDPSRVAGGAAGGSAVAVATGVVPLSLAFDTNGSLRVPAGL 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
G++G +P+YG + G+ P SLD VG RD
Sbjct: 187 TGVIGLKPTYGDLPREGMYPFVESLDVVGVLGRD 220
>gi|340788008|ref|YP_004753473.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Collimonas fungivorans Ter331]
gi|340553275|gb|AEK62650.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Collimonas fungivorans Ter331]
Length = 340
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+A P+ GL +V DLFD+ G T G R + AS +S V LV GA +G+T
Sbjct: 79 QARSPIDGLPISVKDLFDVAGSTTLAGSVAL-RDAAPASVSSLAVQRLVAAGAVIVGRTN 137
Query: 113 VDEFAYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRV 170
+ EFAYS G N HY TP NP + ++PGGSSSGAAV+V+ + ++G DT G VR+
Sbjct: 138 MTEFAYSGLGINPHYGTPRNPWDRSTGRIPGGSSSGAAVSVSDAMAAAAIGSDTGGSVRI 197
Query: 171 PSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
P+A CG+ GF+P+ VS G++P+ST LD++G A
Sbjct: 198 PAALCGLTGFKPTARRVSLQGVLPLSTQLDSIGPIA 233
>gi|18312690|ref|NP_559357.1| Glu-tRNA(Gln) amidotransferase subunit A (gatA) [Pyrobaculum
aerophilum str. IM2]
gi|18160166|gb|AAL63539.1| Glu-tRNA(Gln) amidotransferase subunit A (gatA) [Pyrobaculum
aerophilum str. IM2]
Length = 399
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 143/316 (45%), Gaps = 29/316 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+ AV D ++ G G P + A +T+ VV L+ GA IGKT + E A
Sbjct: 42 LCGLAVAVKDNIEVAGMPITNGAPYMKKM---ADKTAPVVRRLIAEGAVVIGKTNMHELA 98
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
N H+ NP PS++ GGSS G+A AVA + D +G DT G VR+P+A CG+
Sbjct: 99 LGATNVNPHFGPTRNPHDPSRITGGSSGGSAGAVAIGVADLGIGTDTGGSVRIPAALCGV 158
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDP----KILRHVGHVLLQLPFAAQRSPRQI 233
+G++P YG + G++P++ SLD VG+ R +IL G +LP P +
Sbjct: 159 VGYKPPYGKIPTEGVLPLAQSLDHVGFITRTVADLIRILSAAGWGPSELP-----RPNRF 213
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
A L+ I + K EK F + V E++G D F +T G
Sbjct: 214 RFA----VLMGISEN------TKHVEKAFWKAVGILESIGGMRDEV------FIET-GRY 256
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
I E N+ +++ + D++ + + K ++ E
Sbjct: 257 AAARAAILLSEAAANYYDYLRGAAEHMGNDVATLLSTGAALPAVAYITAKRVKEEATKFF 316
Query: 354 SSLLKDDGILVTPTTA 369
+L K ++VTPTTA
Sbjct: 317 DTLFKKYDVVVTPTTA 332
>gi|167573883|ref|ZP_02366757.1| pyrazinamidase/nicotinamidase [Burkholderia oklahomensis C6786]
Length = 375
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 150/343 (43%), Gaps = 38/343 (11%)
Query: 60 GLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYS 119
G + A+ D DI G+ T G A R + VV +++ G GK + E A+
Sbjct: 14 GPTIAIKDTIDIAGHRT-TGASRALADAPPAERHAEVVERVLDAGWRIAGKANMHELAFG 72
Query: 120 INGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILG 179
+ G N + TP NP P+++PGGSSSG+A V VD +LG DT G +R P+A CG++G
Sbjct: 73 MTGINDYTGTPVNPQDPARIPGGSSSGSASLVGLGRVDAALGTDTGGSIRGPAACCGVIG 132
Query: 180 FRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSP-----RQII 234
+P++G VS G+ P+ T+LD VG FARD L V L A+ SP R I
Sbjct: 133 LKPTFGRVSRRGVAPVDTTLDCVGPFARDVATLVAVMAALAPGFDASVASPQLAACRVAI 192
Query: 235 IADDCFELLKIPADRVV-QVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+ D ++ +R Q +T L+ ++L FD+ G N E
Sbjct: 193 VETDSDAAIRAAVERAAGQADCAATP-------LRLDDLAAAFDA------GLAVINAET 239
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
++ S K L DI A + + ++ + +R + +
Sbjct: 240 SRAF------------GRFVGSGK--LGADIDARLRVAATTTADQLDTAERVRARFTAQV 285
Query: 354 SSLLKDDGILVTPTTAYPPPKL----GGKEMLSEDYQNRAFSL 392
L +LV PT P L GG +++ R F+L
Sbjct: 286 DRALGTADVLVLPTLPALPITLDEARGGASVIAMSSLIRPFNL 328
>gi|94499474|ref|ZP_01306011.1| Amidase [Bermanella marisrubri]
gi|94428228|gb|EAT13201.1| Amidase [Oceanobacter sp. RED65]
Length = 603
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 10/176 (5%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
KQ+ +I+ L+ P +PL G+ FA+ D D+ G T PE+A ++
Sbjct: 49 KQEIAPYIDALKNKKPED-------YPLWGIPFAIKDNIDLAGIKTTAACPEFAFLPDSS 101
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ VVS L+E GA IGKT +D+FA +NGT Y N P + GGSSSG++VA
Sbjct: 102 AY---VVSKLIEAGAIPIGKTNLDQFATGLNGTRSPYGPVKNSFKPDYISGGSSSGSSVA 158
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
VA LV FSLG DT G RVP+ F ++G +PS G +S G++P SLD + F+
Sbjct: 159 VALGLVSFSLGTDTAGSGRVPACFNNLVGTKPSIGLLSATGMLPACKSLDCMTIFS 214
>gi|425076659|ref|ZP_18479762.1| AtzE family amidohydrolase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425087292|ref|ZP_18490385.1| AtzE family amidohydrolase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405592368|gb|EKB65820.1| AtzE family amidohydrolase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405604016|gb|EKB77137.1| AtzE family amidohydrolase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
Length = 465
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 165/395 (41%), Gaps = 45/395 (11%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L G+ +AV +LFD+ G+ T G E A+ S V L GA
Sbjct: 66 RPLPP-----LAGIPYAVKNLFDVAGHTTLAG-AELLSDRPPAASDSWAVRQLHSAGALL 119
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
G +D +AY N HY NP S++ GGSS G+A AVAA LV FSLG DT G
Sbjct: 120 SGMLNMDAYAYGFTTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVHFSLGSDTNGS 179
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+RVP++ CGI G +P++G +S G P SLD +G FAR L V L
Sbjct: 180 IRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDAL------QG 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF------DSKVP 281
R P ADD AD+ + E+ G + L+ LG YF D++
Sbjct: 234 RDP-----ADD------FQADKASERTGNLLER--GLEGLRCARLGGYFTTWCDDDARAA 280
Query: 282 SLKGFHK--TNGELK--------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
+ H + EL+ + +I E N + + +P +
Sbjct: 281 MDRVAHALGADSELQFADAALARSAAFIISASEGGNQYLTDLRHSPERFEPHSRERLLAG 340
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRA 389
I + R R A+ SL +L+ P T +G +EM+ + RA
Sbjct: 341 AMIPSAWYLQAQRFRRHARQAMKSLFSQADVLIAPATPCSATPIGAEEMVINGQPLPVRA 400
Query: 390 FSLLSIASVS--GCCQVTVPLGYYDKCPTSVSFIA 422
+ +S G VTVPL P + IA
Sbjct: 401 SMGMLTQPISFLGLPVVTVPLRTASGKPIGLQLIA 435
>gi|126459486|ref|YP_001055764.1| amidase [Pyrobaculum calidifontis JCM 11548]
gi|126249207|gb|ABO08298.1| Amidase [Pyrobaculum calidifontis JCM 11548]
Length = 400
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 170/394 (43%), Gaps = 39/394 (9%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL+ AV D ++ G G P R A+ T+ VV+ L+ GA IGKT + E A
Sbjct: 41 LCGLAVAVKDNIEVAGMPITNGAPYMRRV---ATETAPVVAALMAEGAVVIGKTNMHELA 97
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
N H+ NP P+++ GGSS G+A AVA + D LG DT G VR+P+A CG+
Sbjct: 98 LGATNINPHFGPTRNPHDPTRITGGSSGGSAGAVAIGVADVGLGTDTGGSVRIPAALCGV 157
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARD----PKILRHVGHVLLQLPFAAQ-RSPRQ 232
+G++P YG + G++P++ SLD VG R +++ VG + +LP + R
Sbjct: 158 VGYKPPYGKLPTRGVLPLAQSLDHVGLITRSVDDLVRVMAAVGWLERELPEVKRFRFAVL 217
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+ IA++ + EK F R V E +G D + +
Sbjct: 218 MGIAENT----------------RHVEKAFWRAVEVLERIGGVRDEVFVEARKYASARAA 261
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
I E N+ + V + D++ + + K ++ E
Sbjct: 262 -------ILLSEAAANYYHLLRGVGDKMGKDVATLLAAGAALPAVAYITAKQVKEEATQF 314
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
+ L K ++ TPTTA + +E S + + + + +++G ++VP
Sbjct: 315 FNKLFKKYDVVATPTTATEAIPI--EEADSVAVRPKLLAYTELFNLTGHPAISVP-APTS 371
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQAD 446
P + AR D +L V MY +E AD
Sbjct: 372 GLPVGLQLAAR---DEEVLLAVAKMYE--KEVAD 400
>gi|340778538|ref|ZP_08698481.1| amidase [Acetobacter aceti NBRC 14818]
Length = 429
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 143/325 (44%), Gaps = 33/325 (10%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ F V DLFD+EG VT G + A++ + VV LV GA + +DEFA
Sbjct: 68 LAGVPFGVKDLFDMEGLVTTAGS-VVLNGNPPATQDAAVVQRLVAAGAIPVATLNMDEFA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y + N HY T NP + GGSS G+A +VAA L+ F+LG DT G +RVP++ CG+
Sbjct: 127 YGFSTENAHYGTTRNPRNTDCLAGGSSGGSAASVAAGLLPFALGSDTNGSIRVPASLCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV-----GHVLLQLPFAAQRSPRQ 232
G RP+ G + G+ P SLDTVG FA L+ V GH L ++ R
Sbjct: 187 WGLRPTQGLLPLDGVYPFVASLDTVGPFAGTVTDLQRVFEAMNGHALEEI-----EDVRS 241
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+ IA L+ D + I FG K +L E ++ +
Sbjct: 242 LRIARLGGWFLQ-DVDPAILDGIDRILAFFGSH--KEVDLAEVARARASAF--------- 289
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRNEMR 350
LI E N H + DP + G ML + V RN R
Sbjct: 290 ------LISAAEGGNLHLPRLRKTPMDYDPATRDRLIAGAMLPSAAVV--QAHRFRNWFR 341
Query: 351 SAISSLLKDDGILVTPTTAYPPPKL 375
+ + L + +L+ P T P P++
Sbjct: 342 TGLHELFEQVDVLLAPATPGPAPRI 366
>gi|313681260|ref|YP_004058998.1| allophanate hydrolase [Sulfuricurvum kujiense DSM 16994]
gi|313154120|gb|ADR32798.1| allophanate hydrolase [Sulfuricurvum kujiense DSM 16994]
Length = 582
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 118/225 (52%), Gaps = 11/225 (4%)
Query: 54 APHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
A PL G+ FAV D DI G T G E++ S + VV L+E GA IGKT +
Sbjct: 63 ASLPLYGVPFAVKDNIDIAGMNTTAGCAEFSYL---PSEHAFVVKQLIEAGAIPIGKTNL 119
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
D+FA + GT Y N P + GGSSSG+A+AV A +V FSLG DT G RVP+A
Sbjct: 120 DQFASGLVGTRSPYGEGINLFNPDYVSGGSSSGSALAVTAGIVPFSLGTDTAGSGRVPAA 179
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD----PKILRHVGHVLLQLPFAAQRS 229
F I+G +P+ GA+S G++P SLD V FA++ ++ G V + F+ RS
Sbjct: 180 FGNIVGLKPTRGALSIRGVVPACKSLDCVAIFAQNCEDAGRVYDLCGIVDDEDSFS--RS 237
Query: 230 PRQIIIADDCFELLKIPADRVVQVVIKST-EKLFGRQVLKHENLG 273
II F +P + ++ S E LF V K E+LG
Sbjct: 238 KSCIIPFGGTFR-FGVPREEQLEFFGNSAYESLFWESVKKLESLG 281
>gi|424896435|ref|ZP_18320009.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393180662|gb|EJC80701.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 446
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 178/400 (44%), Gaps = 32/400 (8%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L G+ FA D+F+ G +T G P + R++ VV+ L E GA IGK EFA
Sbjct: 69 LDGVPFAAKDMFETAGILTTGGSP--VLEDNVPGRSALVVTRLEEAGAVLIGKANQHEFA 126
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y G N T NP +++ GGSS G+A AVAA +V ++LG DT G VRVP+A CG+
Sbjct: 127 YGATGENGWSGTTRNPFDTTRLAGGSSGGSAAAVAAGIVPYALGTDTGGSVRVPAALCGV 186
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRS-PRQIIIA 236
+GF+PS+G +S G+IP SLD G FA + + V V Q Q + P+ + +
Sbjct: 187 VGFKPSFGRMSLQGVIPYCWSLDHAGIFANN---VEDVALVFDQTTSVGQAAVPKNLKVG 243
Query: 237 DDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-DSKVPSLKGFHKTNGELKN 295
++K A+R V F E +G F + ++P E +
Sbjct: 244 -----IVKGWAERSEATV----RHAFLTAKTALEQMGASFTEIELPD-------QSEART 287
Query: 296 VMRLIQRYEFKNNHNEWIESVKPALDPDI--SAEIGEMLEISETVIENCKSIRNEMRSAI 353
V IQ E H + + D+ +G+ L +E I+ CK + A
Sbjct: 288 VSLTIQLAETLAYHGPNLARAGASFGKDMLSGMALGQFLS-AECYIQ-CKRMLEVYNRAF 345
Query: 354 SSLLKDDGILVTPTTAYPPPKLGG--KEMLSEDYQ-NRAFSLL-SIASVSGCCQVTVPLG 409
S + +L+TP PK+G E+ ++ A +L S ++ G + +P+
Sbjct: 346 SETMSTVDVLLTPGCPITAPKVGALHVEVGGDNLPVGNALTLFTSFFNLVGTPAIALPVS 405
Query: 410 YYDKC-PTSVSFIARHGGDRFLLDTVQNMYASLQEQADIA 448
P SV + D LL T Q L+ IA
Sbjct: 406 EETATLPVSVQLVGGRNRDYELLATAQAFEEVLRATNKIA 445
>gi|388568361|ref|ZP_10154780.1| amidase [Hydrogenophaga sp. PBC]
gi|388264406|gb|EIK89977.1| amidase [Hydrogenophaga sp. PBC]
Length = 562
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Query: 46 PPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGA 105
P QPL + PL GL FAV D D++ + T P + RT A +TVV L++ GA
Sbjct: 15 PDQPLRTREEGPLKGLRFAVKDNIDVQTWPTTAACPAFERTAPA---HATVVQRLLDAGA 71
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
T GKT +D+FA +NGT Y N P+ + GGSSSG+AV VA VDFSLG DT
Sbjct: 72 TLDGKTNLDQFACGLNGTRSPYGPVPNAFDPTLVSGGSSSGSAVVVARGEVDFSLGTDTA 131
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G RVP+ I+G +PS G +S G++P + SLD V FAR
Sbjct: 132 GSGRVPAGLNNIVGLKPSRGLISAHGVLPAAQSLDCVSIFAR 173
>gi|94967532|ref|YP_589580.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus
Koribacter versatilis Ellin345]
gi|166217639|sp|Q1IUE4.1|GATA_ACIBL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|94549582|gb|ABF39506.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Candidatus Koribacter versatilis Ellin345]
Length = 480
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGH---PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
L GL A+ D+ +G T G E+ + A TVV L GA +GKT D
Sbjct: 71 LAGLPVAIKDVISTKGVRTTAGSKILEEFIAPYDA-----TVVQKLEAAGAVILGKTNCD 125
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA + N Y NP S++PGGSS G+A VAA SLG DT G +R P++F
Sbjct: 126 EFAMGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASF 185
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
CG++G P+YG VS G+I ++SLD +G FA+D K
Sbjct: 186 CGVVGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVK 221
>gi|319792155|ref|YP_004153795.1| amidase [Variovorax paradoxus EPS]
gi|315594618|gb|ADU35684.1| Amidase [Variovorax paradoxus EPS]
Length = 449
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 3/152 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL +V DL+D+ G T G A+R + V+ L GA +GKT + EFA
Sbjct: 71 LAGLPVSVKDLYDVAGETTMAGS-AVCEGEPPAARDAVAVARLRTQGAAIVGKTNMTEFA 129
Query: 118 YSINGTNKHYDTPTNPAAPS--QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
+S G N HY TP NPA ++PGGSSSGAAV+VA L LG DT G +R+P+A C
Sbjct: 130 FSGVGINPHYGTPHNPADAGMPRIPGGSSSGAAVSVALGLAVAGLGSDTGGSIRIPAALC 189
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G++GF+ + V G ++ SLDTV AR
Sbjct: 190 GLVGFKSTQSRVPRTGAFELARSLDTVCAMAR 221
>gi|171915812|ref|ZP_02931282.1| Amidase [Verrucomicrobium spinosum DSM 4136]
Length = 434
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 45 PPPQPL-----PPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVST 99
PPP PP T L V DL D++G VT G + + A++ + +
Sbjct: 41 PPPHAFISHRAPPDGN---TKLKLGVKDLIDMKGEVTTAGSERYYKQGRPAAQDAECLRL 97
Query: 100 LVE-GGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDF 158
+ + +GKT + EFA ++G+N ++ TP NP +++PGGSSSG+A AV L D
Sbjct: 98 IRKRNDVVIVGKTNLSEFAVGVSGSNDYFGTPVNPVDKTRVPGGSSSGSASAVGLGLADV 157
Query: 159 SLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTS-LDTVGWFARDPKILRHVGH 217
+LG DT G +RVP+A CG+ G + ++GA+S G+ PIS + LDTVG ARD L G
Sbjct: 158 ALGTDTAGSIRVPAACCGVAGLKTTFGAISTKGVYPISPNYLDTVGPIARDVNGL-VTGM 216
Query: 218 VLLQLPFAAQ 227
LL+ FA++
Sbjct: 217 GLLEEGFASR 226
>gi|421870475|ref|ZP_16302107.1| Indoleacetamide hydrolase [Burkholderia cenocepacia H111]
gi|358069381|emb|CCE52985.1| Indoleacetamide hydrolase [Burkholderia cenocepacia H111]
Length = 452
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V D+ GY T G P A A++ +TV + L GA IG T +D
Sbjct: 70 PGPLAGVPFLVKWNVDVAGYPTVAGSPARAALPPASADAATV-ARLRAAGAVPIGATHMD 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A G N HY PA P++M GGSSSG+A AVAA V +LG DT G +R P+A
Sbjct: 129 ELACGATGVNPHYGAVHLPADPTRMTGGSSSGSAAAVAAGYVPLALGSDTNGSIRAPAAL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
CG+ GFRP G +S G +P + SLDTVG FA D
Sbjct: 189 CGVWGFRPGDGRLSRTGCLPYAASLDTVGGFAND 222
>gi|206564097|ref|YP_002234860.1| putative amidase [Burkholderia cenocepacia J2315]
gi|198040137|emb|CAR56120.1| putative amidase [Burkholderia cenocepacia J2315]
Length = 452
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V D+ GY T G P A A++ +TV + L GA IG T +D
Sbjct: 70 PGPLAGVPFLVKWNVDVAGYPTVAGSPARAALPPASADAATV-ARLRAAGAVPIGATHMD 128
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A G N HY PA P++M GGSSSG+A AVAA V +LG DT G +R P+A
Sbjct: 129 ELACGATGVNPHYGAVHLPADPTRMTGGSSSGSAAAVAAGYVPLALGSDTNGSIRAPAAL 188
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
CG+ GFRP G +S G +P + SLDTVG FA D
Sbjct: 189 CGVWGFRPGDGRLSRAGCLPYAASLDTVGGFAND 222
>gi|428780421|ref|YP_007172207.1| amidohydrolase, AtzE family [Dactylococcopsis salina PCC 8305]
gi|428694700|gb|AFZ50850.1| amidohydrolase, AtzE family [Dactylococcopsis salina PCC 8305]
Length = 462
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
LTG+ FAV + FDI G VT + + A+ +T ++ L +GGA +G +DE+A
Sbjct: 73 LTGVPFAVKNSFDIAG-VTTLAGAKINAENPPATADATAIARLKQGGAILVGALNMDEYA 131
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP S + GGSS +A AVA+ LV +LG DT G VRVP+A CG+
Sbjct: 132 YGFVTENSHYGVTPNPHDASCIAGGSSGASAAAVASGLVPIALGSDTNGSVRVPAALCGV 191
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
G +P+YG +S G + +S SLD +G FAR + L V +L
Sbjct: 192 YGLKPTYGRLSRAGTVLLSDSLDQIGIFARSVRDLATVMDLL 233
>gi|84489009|ref|YP_447241.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosphaera
stadtmanae DSM 3091]
gi|109891957|sp|Q2NHN5.1|GATA_METST RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|84372328|gb|ABC56598.1| GatA [Methanosphaera stadtmanae DSM 3091]
Length = 455
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 183/391 (46%), Gaps = 21/391 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL + ++E ++ P + S +TV++ +++ IG T +DEFA
Sbjct: 66 LAGLVIGIKSNINVEDFIISAASPTLKNYY--GSYNATVINRILDEDGVIIGLTNMDEFA 123
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ Y NP AP +PGGSS G+A A+AA++ D +LG DT G +R P++ CG+
Sbjct: 124 AGSSTETSMYGPTNNPKAPGHIPGGSSGGSAAAIAANMCDITLGSDTGGSIRNPASHCGV 183
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL-PFAAQRSPRQ--II 234
+GF+P+YG VS G++ ++ SLD +G FA D + + +V+ P+ +Q
Sbjct: 184 MGFKPTYGMVSRQGLLDLAMSLDQIGPFANDTTGIGLMLNVICGYDPYDTTTINKQPEDF 243
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+ D L+ VV+ + T+ Q+ K + +++ L F N L
Sbjct: 244 LKDTTNSTLEGQTIGVVKEFMDITDDKITSQINKSIDDMTSLGAEIKELS-FEDINLGLP 302
Query: 295 NVMRLIQRYEF-----KNNHNEWIESVKPALDPDIS--AEIGEML---EISETVIENCKS 344
LI EF K + ++ E ++ +++ EIG + E S
Sbjct: 303 -TYYLINYVEFFSATRKYDGRKYGERIEEVCGAEVARRIEIGSYISQKEFSGKYYNKALQ 361
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI-ASVSGCCQ 403
R+ +R+ + LL D ++ PT P K+ G+E+ + D A+ +L++ A+++G
Sbjct: 362 ARSLIRNEFNELLNDVDVIAGPTVPKLPHKI-GEEIETMDM--YAYDVLTVLANITGIPA 418
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTV 434
++ G D P + A+ D +L T+
Sbjct: 419 SSMNSGLVDNIPVGLQLQAKPEDDHKILSTM 449
>gi|288935405|ref|YP_003439464.1| amidohydrolase, AtzE family [Klebsiella variicola At-22]
gi|290509455|ref|ZP_06548826.1| aspartyl-tRNA/glutamyl-tRNA amidotransferase subunit A [Klebsiella
sp. 1_1_55]
gi|288890114|gb|ADC58432.1| amidohydrolase, AtzE family [Klebsiella variicola At-22]
gi|289778849|gb|EFD86846.1| aspartyl-tRNA/glutamyl-tRNA amidotransferase subunit A [Klebsiella
sp. 1_1_55]
Length = 465
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 165/395 (41%), Gaps = 45/395 (11%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L G+ +AV +LFD+ G+ T G E A+ S V L GA
Sbjct: 66 RPLPP-----LAGIPYAVKNLFDVAGHTTLAG-AELLSDRPPATSDSWAVRQLHSAGALL 119
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
G +D +AY N HY NP S++ GGSS G+A AVAA LV FSLG DT G
Sbjct: 120 SGMLNMDAYAYGFTTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVHFSLGSDTNGS 179
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+RVP++ CGI G +P++G +S G P SLD +G FAR L V L
Sbjct: 180 IRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDAL------QG 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF------DSKVP 281
R P ADD AD+ + E+ G + L+ LG YF D++
Sbjct: 234 RDP-----ADD------FQADKASERTGNLLER--GLEGLRCARLGGYFTTWCDDDARAA 280
Query: 282 SLKGFHK--TNGELK--------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
+ H + EL+ + +I E N + + +P +
Sbjct: 281 VDRVAHALGADSELQFADAALARSAAFIISASEGGNQYLTDLRHSPERFEPHSRERLLAG 340
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRA 389
I + R R A+ SL +L+ P T +G +EM+ + RA
Sbjct: 341 AMIPSAWYLQAQRFRRHARQAMKSLFSQADVLIAPATPCSATPIGAEEMVINGQPLPVRA 400
Query: 390 FSLLSIASVS--GCCQVTVPLGYYDKCPTSVSFIA 422
+ +S G VTVPL P + IA
Sbjct: 401 SMGMLTQPISFLGLPVVTVPLRTASGKPIGLQLIA 435
>gi|120609543|ref|YP_969221.1| amidase [Acidovorax citrulli AAC00-1]
gi|120588007|gb|ABM31447.1| Amidase [Acidovorax citrulli AAC00-1]
Length = 457
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 89/153 (58%), Gaps = 1/153 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL GL +V DLFD+ G VT G A A S + V G A +G+T +
Sbjct: 72 PSPLAGLPVSVKDLFDVRGQVTRAGSAVLADAGPAPSDAAAVARLRAAG-AVLLGRTNMS 130
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA+S G N H+ TP +P ++ GGSSSGAA VA DL +LG DT G +R+PSAF
Sbjct: 131 EFAFSGLGLNPHHGTPAHPQDAGRVTGGSSSGAAATVALDLAAAALGTDTGGSIRIPSAF 190
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG+ GF+P+ V G P+S SLD+VG AR
Sbjct: 191 CGLTGFKPTARRVPLAGAYPLSRSLDSVGPLAR 223
>gi|332285874|ref|YP_004417785.1| amidase [Pusillimonas sp. T7-7]
gi|330429827|gb|AEC21161.1| amidase [Pusillimonas sp. T7-7]
Length = 447
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 95/152 (62%), Gaps = 3/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
P+ GL +V DLFDI G T G + AA + + +V L+ GA +GKT + EF
Sbjct: 68 PIDGLPVSVKDLFDISGDTTLAGS-TVLKDAPAAQQNALIVQRLIGAGAVIMGKTNMTEF 126
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+S G N HY TP++P A ++PGGSSSGA V+VA + ++G DT G VR+PSAF
Sbjct: 127 AFSGLGLNPHYGTPSSPWDRANKRIPGGSSSGAGVSVADQMAVAAIGTDTGGSVRIPSAF 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
CG+ GF+P+ +S G +P+S SLD++G A
Sbjct: 187 CGLTGFKPTARRISQTGALPLSFSLDSIGPLA 218
>gi|378951512|ref|YP_005209000.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas fluorescens F113]
gi|359761526|gb|AEV63605.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas fluorescens F113]
Length = 451
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 176/406 (43%), Gaps = 47/406 (11%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHS-AASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ +AV DL D+ G T G R + A+ + V++ L G +GKT + EF
Sbjct: 64 LDGIPYAVKDLLDVAGSRTTAG--SITRIDAPMAAVDAAVIAALTAQGMIPMGKTNLTEF 121
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N H+ TP + S++PGGSSSG+A+AV +V ++G DT G +R+P+AF
Sbjct: 122 AYSGLGLNPHFGTPVSDLMGDDSRVPGGSSSGSAIAVQRGIVSSAIGTDTAGSIRIPAAF 181
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD-------PKILRHVGHVLLQLPFAAQ 227
G++G++ S G S G+ P++ +LD++G FAR +R V++Q AA
Sbjct: 182 NGLVGYKASTGRYSMAGVHPLAVTLDSLGSFARTVADCAALDAAMRGFSGVVIQ---AAN 238
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLKGF 286
S + ++ D AD +Q + H NL + + +
Sbjct: 239 LSGLRFLVDDGVM------ADPALQPAV-------------HHNLVSMMERLREAGAQVE 279
Query: 287 HKTNGELKNVMRLIQRYEFKNNHNEW------IES-VKPALDPDISAEIGEMLEISETVI 339
++T + + LI R + W +E + +D + A + EI
Sbjct: 280 YRTIVTVAHTRELISRSGWLGAIEAWRLLGPVVEGPLGARMDRRVQARLRSAKEIDLATE 339
Query: 340 ENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG---GKEMLSEDYQNRAFSLLSIA 396
+ +R + +AI L D ILV PT + P + + L SL I
Sbjct: 340 ARIRHLREGLMAAIEDEL-DGAILVMPTVKHVAPPMAPLENDDALFAAVNLETLSLTMIG 398
Query: 397 SVSGCCQVTVPLGYYD-KCPTSVSFIARHGGDRFLLDTVQNMYASL 441
S+ V +P G TS F G D LL + ++L
Sbjct: 399 SLLDMPGVAIPSGKDSVGLATSTLFSTTRGHDDQLLSAALAIESTL 444
>gi|187476799|ref|YP_784823.1| amidase [Bordetella avium 197N]
gi|115421385|emb|CAJ47890.1| putative amidase [Bordetella avium 197N]
Length = 469
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL AV DL DIEG +T G W + S T+T V+ L++ G +GKT + EF
Sbjct: 72 PLDGLPIAVKDLCDIEGQITTGGSAAWRQRRSEV--TATAVTRLLDAGMVILGKTQMVEF 129
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
A+ GTN TP NP +++PGGSSSG+ VAVAA LV +LG DT G VR+P+A
Sbjct: 130 AFGGWGTNPLLGTPRNPWDMQHARIPGGSSSGSGVAVAAGLVPAALGSDTGGSVRIPAAL 189
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
G+ G + + G +S G +P+STSLD++G RD +
Sbjct: 190 NGVTGLKTTRGLISLYGAVPLSTSLDSIGPLTRDTR 225
>gi|428310642|ref|YP_007121619.1| amidohydrolase, AtzE family [Microcoleus sp. PCC 7113]
gi|428252254|gb|AFZ18213.1| amidohydrolase, AtzE family [Microcoleus sp. PCC 7113]
Length = 461
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P L G+ FAV +L+DI T G + + +A R +T ++ L + GA +G +D
Sbjct: 68 PGILAGVPFAVKNLYDIADLTTLAGA-KINSENPSAKRDATAIARLQQAGAVLVGALNMD 126
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E+AY N HY NP P+++ GGSS G+A AVAA V +LG DT G +RVP++
Sbjct: 127 EYAYGFVTENYHYGATRNPHDPTRIAGGSSGGSAAAVAAGFVPLTLGTDTNGSIRVPASL 186
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CGILGF+P+YG +S G+ S+S D VG FAR
Sbjct: 187 CGILGFKPTYGRLSRSGVALFSSSFDHVGPFAR 219
>gi|206579945|ref|YP_002238431.1| amidase [Klebsiella pneumoniae 342]
gi|206569003|gb|ACI10779.1| amidohydrolase, AtzE family [Klebsiella pneumoniae 342]
Length = 465
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 165/395 (41%), Gaps = 45/395 (11%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L G+ +AV +LFD+ G+ T G E A+ S V L GA
Sbjct: 66 RPLPP-----LAGIPYAVKNLFDVAGHTTLAG-AELLSDRPPATSDSWAVRQLHSAGALL 119
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
G +D +AY N HY NP S++ GGSS G+A AVAA LV FSLG DT G
Sbjct: 120 SGMLNMDAYAYGFTTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVHFSLGSDTNGS 179
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+RVP++ CGI G +P++G +S G P SLD +G FAR L V L
Sbjct: 180 IRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDAL------QG 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF------DSKVP 281
R P ADD AD+ + E+ G + L+ LG YF D++
Sbjct: 234 RDP-----ADD------FQADKASERTGNLLER--GLEGLRCARLGGYFTTWCDDDARAA 280
Query: 282 SLKGFHK--TNGELK--------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
+ H + EL+ + +I E N + + +P +
Sbjct: 281 VDRVAHALGADSELQFADAALARSAAFIISASEGGNQYLTDLRHSPERFEPHSRERLLAG 340
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRA 389
I + R R A+ SL +L+ P T +G +EM+ + RA
Sbjct: 341 AMIPSAWYLQAQRFRRHARQAMKSLFSQADVLIAPATPCSATPIGAEEMVINGQPLPVRA 400
Query: 390 FSLLSIASVS--GCCQVTVPLGYYDKCPTSVSFIA 422
+ +S G VTVPL P + IA
Sbjct: 401 SMGMLTQPISFLGLPVVTVPLRTASGKPIGLQLIA 435
>gi|425081586|ref|ZP_18484683.1| AtzE family amidohydrolase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405603016|gb|EKB76139.1| AtzE family amidohydrolase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
Length = 465
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 165/395 (41%), Gaps = 45/395 (11%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L G+ +AV +LFD+ G+ T G E A+ S V L GA
Sbjct: 66 RPLPP-----LAGIPYAVKNLFDVAGHTTLAG-AELLSDRPPAASDSWAVRQLHSAGALL 119
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
G +D +AY N HY NP S++ GGSS G+A AVAA LV FSLG DT G
Sbjct: 120 SGMLNMDAYAYGFTTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVHFSLGSDTNGS 179
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+RVP++ CGI G +P++G +S G P SLD +G FAR L V L
Sbjct: 180 IRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDAL------QG 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF------DSKVP 281
R P ADD AD+ + E+ G + L+ LG YF D++
Sbjct: 234 RDP-----ADD------FQADKASERTGNLLER--GLEGLRCARLGGYFTTWCDDDARAA 280
Query: 282 SLKGFHK--TNGELK--------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
+ H + EL+ + +I E N + + +P +
Sbjct: 281 VDRVAHALGADSELQFADAALARSAAFIISASEGGNQYLTDLRHSPERFEPHSRERLLAG 340
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRA 389
I + R R A+ SL +L+ P T +G +EM+ + RA
Sbjct: 341 AMIPSAWYLQAQRFRRHARQAMKSLFSQADVLIAPATPCSATPIGAEEMVINGQPLPVRA 400
Query: 390 FSLLSIASVS--GCCQVTVPLGYYDKCPTSVSFIA 422
+ +S G VTVPL P + IA
Sbjct: 401 SMGMLTQPISFLGLPVVTVPLRTASGKPIGLQLIA 435
>gi|388568373|ref|ZP_10154792.1| biuret hydrolase [Hydrogenophaga sp. PBC]
gi|388264418|gb|EIK89989.1| biuret hydrolase [Hydrogenophaga sp. PBC]
Length = 464
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV +LFDI G VT G + RT+ A+ + +V L + GA +G +DE+
Sbjct: 69 PLAGVPFAVKNLFDIAGEVTLAGS-KVNRTNPPATADAVLVQRLQDSGAVLVGSLNMDEY 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP P + GGSS G+ AVAA V +LG DT G +RVPS+FCG
Sbjct: 128 AYGFTTENTHYGPTHNPHRPGHVAGGSSGGSGAAVAAGQVPLTLGSDTNGSIRVPSSFCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+ G +P++G +S G P S+D +G FA D
Sbjct: 188 VWGLKPTFGRLSRRGTYPFVASIDHLGPFADD 219
>gi|152970322|ref|YP_001335431.1| amidase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|424933363|ref|ZP_18351735.1| Amidase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|150955171|gb|ABR77201.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|407807550|gb|EKF78801.1| Amidase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 465
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 165/395 (41%), Gaps = 45/395 (11%)
Query: 48 QPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATC 107
+PLPP L G+ +AV +LFD+ G+ T G E A+ S V L GA
Sbjct: 66 RPLPP-----LAGIPYAVKNLFDVAGHTTLAG-AELLSDRPPATSDSWAVRQLHSAGALL 119
Query: 108 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
G +D +AY N HY NP S++ GGSS G+A AVAA LV FSLG DT G
Sbjct: 120 SGMLNMDAYAYGFTTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVHFSLGSDTNGS 179
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQ 227
+RVP++ CGI G +P++G +S G P SLD +G FAR L V L
Sbjct: 180 IRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDAL------QG 233
Query: 228 RSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF------DSKVP 281
R P ADD AD+ + E+ G + L+ LG YF D++
Sbjct: 234 RDP-----ADD------FQADKASERTGNLLER--GLEGLRCARLGGYFTTWCDDDARAA 280
Query: 282 SLKGFHK--TNGELK--------NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEM 331
+ H + EL+ + +I E N + + +P +
Sbjct: 281 VDRVAHALGADSELQFADAALARSAAFIISASEGGNQYLTDLRHSPERFEPHSRERLLAG 340
Query: 332 LEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEML--SEDYQNRA 389
I + R R A+ SL +L+ P T +G +EM+ + RA
Sbjct: 341 AMIPSAWYLQAQRFRRHARQAMKSLFSQADVLIAPATPCSATPIGAEEMVINGQPLPVRA 400
Query: 390 FSLLSIASVS--GCCQVTVPLGYYDKCPTSVSFIA 422
+ +S G VTVPL P + IA
Sbjct: 401 SMGMLTQPISFLGLPVVTVPLRTASGKPIGLQLIA 435
>gi|421849754|ref|ZP_16282729.1| amidase [Acetobacter pasteurianus NBRC 101655]
gi|371459485|dbj|GAB27932.1| amidase [Acetobacter pasteurianus NBRC 101655]
Length = 451
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V DLFDI G+VT G R A + + +V L GA + +DEF
Sbjct: 69 PLAGVPFGVKDLFDIAGHVTTAGSIVL-RNMPPAQKDAAIVQRLKAAGAIPVATLNMDEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP ++M GGSS G+A AVAA + F+LG DT G +R+P++ CG
Sbjct: 128 AYGFATVNAHYGTTHNPHDLARMAGGSSGGSAAAVAAGFLPFALGSDTNGSIRIPASLCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+ G +P++G + G P S SLD VG FA
Sbjct: 188 VWGIKPTFGRLPRAGAYPFSASLDVVGSFA 217
>gi|329113538|ref|ZP_08242319.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum
DM001]
gi|326697363|gb|EGE49023.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum
DM001]
Length = 451
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V DLFDI G+VT G R A + + +V L GA + +DEF
Sbjct: 69 PLAGVPFGVKDLFDIAGHVTTAGSIVL-RNTPPAQKDAAIVQRLKAAGAIPVATLNMDEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP ++M GGSS G+A AVAA + F+LG DT G +R+P++ CG
Sbjct: 128 AYGFATVNAHYGTTHNPHDLARMAGGSSGGSAAAVAAGFLPFALGSDTNGSIRIPASLCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+ G +P++G + G P S SLD VG FA
Sbjct: 188 VWGIKPTFGRLPRAGAYPFSASLDVVGSFA 217
>gi|320105721|ref|YP_004181311.1| amidase [Terriglobus saanensis SP1PR4]
gi|319924242|gb|ADV81317.1| Amidase [Terriglobus saanensis SP1PR4]
Length = 462
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL ++ DLFD+ G T G A SA + + VVS L + GA IG+T + EF
Sbjct: 78 PLAGLPISIKDLFDVAGETTLSGSTVLADAPSATA-DAAVVSRLRQAGAVLIGRTNMTEF 136
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AYS G N HY TP NP A ++PGGSSSGAAV+V+ + ++G DT G +R+P+A
Sbjct: 137 AYSGLGLNPHYGTPKNPYDRATGRIPGGSSSGAAVSVSDGMAAAAVGSDTGGSIRIPAAL 196
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
CG+ GF+P+ VS G++P+S +LD++G A
Sbjct: 197 CGLTGFKPTARRVSMEGVLPLSPTLDSIGVIA 228
>gi|444359478|ref|ZP_21160789.1| amidase [Burkholderia cenocepacia BC7]
gi|444369079|ref|ZP_21168854.1| amidase [Burkholderia cenocepacia K56-2Valvano]
gi|443599693|gb|ELT67952.1| amidase [Burkholderia cenocepacia K56-2Valvano]
gi|443601982|gb|ELT70091.1| amidase [Burkholderia cenocepacia BC7]
Length = 446
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL G+ F V D+ GY T G P A A++ +TV + L GA IG T +D
Sbjct: 64 PGPLAGVPFLVKWNVDVAGYPTVAGSPARAALPPASADAATV-ARLRAAGAVPIGATHMD 122
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
E A G N HY PA P++M GGSSSG+A AVAA V +LG DT G +R P+A
Sbjct: 123 ELACGATGVNPHYGAVHLPADPTRMTGGSSSGSAAAVAAGYVPLALGSDTNGSIRAPAAL 182
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
CG+ GFRP G +S G +P + SLDTVG FA D
Sbjct: 183 CGVWGFRPGDGRLSRAGCLPYAASLDTVGGFAND 216
>gi|83943370|ref|ZP_00955829.1| amidase [Sulfitobacter sp. EE-36]
gi|83845602|gb|EAP83480.1| amidase [Sulfitobacter sp. EE-36]
Length = 596
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ FAV D D+ GY T P +A T ++ + VV+ L E GA IGKT +D+F
Sbjct: 65 PLWGVPFAVKDNIDVAGYETTAACPAYAYT---PTQDAFVVAKLREAGAIFIGKTNLDQF 121
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + G Y P N P +PGGSS G+ VAV +V FSLG DT G RVP+A
Sbjct: 122 ATGLVGVRTPYGAPRNSIDPEIVPGGSSGGSGVAVGHGIVAFSLGTDTAGSGRVPAALNN 181
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
I+G +P+ GA+S G++P S++TV FA
Sbjct: 182 IVGLKPTLGALSATGVVPACRSVETVSIFA 211
>gi|421470033|ref|ZP_15918444.1| amidase [Burkholderia multivorans ATCC BAA-247]
gi|400228598|gb|EJO58519.1| amidase [Burkholderia multivorans ATCC BAA-247]
Length = 448
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 165/394 (41%), Gaps = 21/394 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G V FD EG+VT G A A + + VV+ L GA I +T + EF
Sbjct: 65 PLAGAVLTVKACFDCEGWVTHAGSRVLADDPPART-DAAVVAALRRAGAVLIAQTAMTEF 123
Query: 117 AYSINGTNKHYDTPTNP--AAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
AY G N+ Y TP P A ++ GGSSSGAAV++A + D S+G DT G R+P+AF
Sbjct: 124 AYGALGVNRTYGTPATPLDAHRERVAGGSSSGAAVSIALGVADLSVGSDTSGSARIPAAF 183
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQII 234
CG+ GF+PS G G+ +ST+ D G A R L A +P
Sbjct: 184 CGVAGFKPSRGRYPDAGMQFLSTTFDVPGLIAATAARCRDADAALHGRAIGAA-APMPAR 242
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
I D F +P + + F + + G + K L + +
Sbjct: 243 IGDLHF---VVPERFATDDTDAAVAQAFDAWLSRLSACGARIERK--RLDCIVEAGAAAR 297
Query: 295 NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI--GEMLEISETVIENCKSIRNEMRSA 352
I E + H + + DP ++A I GE + + + +R S
Sbjct: 298 EGG--IIAAEAFSLHRARLAACADRYDPLVAARITAGEQVRAHDYAAALVR-LRALADSY 354
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDY---QN-RAFSLLSIASVSGCCQVTVPL 408
++L + D +L TPT PP++ E+ QN RAF L A+ ++VP
Sbjct: 355 DAALGEADAVL-TPTVPMLPPRM--PELADTAVYLAQNARAFRLTEFANRLDLPSISVPA 411
Query: 409 GYYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQ 442
P + R GGD LLD + +L
Sbjct: 412 DRRRNRPIGLLMTGRRGGDASLLDAAVRVEHALD 445
>gi|421853720|ref|ZP_16286382.1| amidase [Acetobacter pasteurianus subsp. pasteurianus LMG 1262 =
NBRC 106471]
gi|371478038|dbj|GAB31585.1| amidase [Acetobacter pasteurianus subsp. pasteurianus LMG 1262 =
NBRC 106471]
Length = 451
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ F V DLFDI G+VT G R A + + +V L GA + +DEF
Sbjct: 69 PLAGVPFGVKDLFDIAGHVTTAGSIVL-RNMPPAQKDAAIVQRLKAAGAIPVATLNMDEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY T NP ++M GGSS G+A AVAA + F+LG DT G +R+P++ CG
Sbjct: 128 AYGFATVNAHYGTTHNPHDLARMAGGSSGGSAAAVAAGFLPFALGSDTNGSIRIPASLCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+ G +P++G + G P S SLD VG FA
Sbjct: 188 VWGIKPTFGRLPRAGAYPFSASLDVVGSFA 217
>gi|121607823|ref|YP_995630.1| amidase [Verminephrobacter eiseniae EF01-2]
gi|121552463|gb|ABM56612.1| Amidase [Verminephrobacter eiseniae EF01-2]
Length = 576
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 98/175 (56%), Gaps = 14/175 (8%)
Query: 36 AFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWA---RTHSAASR 92
A+IE+ QPL ++ PL GL FA+ D D G+ T PE+A R H+
Sbjct: 11 AWIERFA-----QPLAGRSTGPLAGLRFAIKDNIDALGWPTTAACPEFAYRPREHA---- 61
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
TVV L++ GA+ +GKT +D+FA +NGT Y N + GGSSSG+A VA
Sbjct: 62 --TVVRKLLDAGASLVGKTNLDQFACGLNGTRSPYGAVPNAFHADYVSGGSSSGSAYVVA 119
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
VDF+LG DT G RVP+ I+G +PS G +S G++P + S+D V FAR
Sbjct: 120 TGQVDFALGTDTAGSGRVPAGLNNIVGIKPSRGLLSARGVVPAAQSVDCVSIFAR 174
>gi|428775042|ref|YP_007166829.1| amidohydrolase, AtzE family [Halothece sp. PCC 7418]
gi|428689321|gb|AFZ42615.1| amidohydrolase, AtzE family [Halothece sp. PCC 7418]
Length = 476
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 169/411 (41%), Gaps = 27/411 (6%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
LTG+ FAV +LFDI G T G A A + + ++ L + GA +G +DE+A
Sbjct: 85 LTGVPFAVKNLFDIAGIPTLAGSKINA-DQPPAQQDAGAIARLKQAGAVLVGALNMDEYA 143
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
Y N HY NP S++ GGSS +A VAA LV +LG DT G VRVP+A CG+
Sbjct: 144 YGFVTENSHYGATPNPHDASRIAGGSSGASAAVVAAGLVPIALGSDTNGSVRVPAALCGV 203
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL----LQLPFAAQRSPRQI 233
G +P+YG +S G + +S SLD +G FAR + L V +L L P + + P
Sbjct: 204 YGLKPTYGRLSRAGTVLLSDSLDHIGIFARSVRDLATVMDLLQGEDLDDPVSTKHPP--- 260
Query: 234 IIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGEL 293
+ C L + R V+V + G Q + E + + +
Sbjct: 261 ---EPCLPQLNL-GIRDVRVAVADGYFATGAQPEALAVVEELARILGTTQRVTLPESERA 316
Query: 294 KNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
K +I E + H + S DP I + + R+ R +
Sbjct: 317 KAAAYIITATEGASQHLHALRSRPQDFDPATRDRFLAGALIPSQWYDQAQRFRSWYRDRL 376
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGK--EMLSEDYQNRAF--SLLSIASVSGCCQVTVPLG 409
+ + I++ P+T P LG K E+ E Q R S G +++P+
Sbjct: 377 REVFQQFDIILAPSTPCCAPYLGQKTIEISGETLQVRPHLGRFTQPISFVGLPVLSIPIY 436
Query: 410 YYDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQ 460
P V I + LL A I + K+ T T NQ
Sbjct: 437 PSGSLPLGVQLITSPYNEALLL-----------RLASILEREKIVTVTSNQ 476
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,210,636,026
Number of Sequences: 23463169
Number of extensions: 397610435
Number of successful extensions: 1512833
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 23067
Number of HSP's successfully gapped in prelim test: 2490
Number of HSP's that attempted gapping in prelim test: 1445433
Number of HSP's gapped (non-prelim): 56481
length of query: 580
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 432
effective length of database: 8,886,646,355
effective search space: 3839031225360
effective search space used: 3839031225360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)