BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008025
(580 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MUK5|TOC64_PEA Translocon at the outer membrane of chloroplasts 64 OS=Pisum
sativum GN=TOC64 PE=1 SV=1
Length = 593
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/589 (70%), Positives = 491/589 (83%), Gaps = 10/589 (1%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MAS S+ +WV+LGLGLAGI ++T+KL + +K+DFGAF+ KL+LLPPP P PPKAPHPL+
Sbjct: 4 MASPSSQIWVILGLGLAGIYVLTRKLTQAVKEDFGAFLLKLKLLPPPPPAPPKAPHPLSS 63
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FA+SD+FDIEG+V+ FGHPEWARTH AS T++ VS LVE GATCIG TVVDE AY I
Sbjct: 64 LNFAISDIFDIEGHVSTFGHPEWARTHEPASSTASAVSALVESGATCIGTTVVDELAYGI 123
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
+G NKH+ TPTNPA P+++PGGSSSGAAVAVAA+ VDFSLG+DT GGVRVP+ FCGILGF
Sbjct: 124 SGENKHFGTPTNPAVPNRVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPAGFCGILGF 183
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
RPS+GAVSH+GIIP+STSLDTVGWFA+DP +LR VGH+LLQ PF QR+PRQIIIADDCF
Sbjct: 184 RPSHGAVSHVGIIPVSTSLDTVGWFAKDPDVLRRVGHILLQAPFVMQRNPRQIIIADDCF 243
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKG--FHKTNGELK---- 294
+ L +P DR QVVIK+TEKLFG+QVLKH N +Y SKV SLK K+NG LK
Sbjct: 244 QHLNVPLDRTSQVVIKATEKLFGKQVLKHINFEDYISSKVSSLKACSIQKSNGVLKSSSL 303
Query: 295 ----NVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
NVM+ +QR+EF++ H+EW+ VKP L P +SA++ E E+SE IEN KS+R+E+R
Sbjct: 304 KLLANVMQSLQRHEFEHTHSEWMSIVKPDLHPAVSAQLHEKFEVSELEIENSKSVRSELR 363
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
A++SLLKD+G+LV PT A PPPKLGGKE LS DYQ+RA SLLSIAS+SGCCQVTVPLG+
Sbjct: 364 VAVNSLLKDEGVLVIPTVADPPPKLGGKEFLSHDYQSRALSLLSIASISGCCQVTVPLGF 423
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
+DK P SVS IARHGGDRFLLDT++ MY LQEQADIA SK S + +++QSAEI+KEK
Sbjct: 424 FDKNPVSVSLIARHGGDRFLLDTLKTMYTVLQEQADIAAPSKSSKSVVSKEQSAEISKEK 483
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQAYKDKQW KAI FYTEAIKL GNNATYYSNRA AYLE GS+LQAE DCT AI+ DKK
Sbjct: 484 GNQAYKDKQWQKAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEEDCTTAISFDKK 543
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKVF 579
NVKAY RRGTAREMLGYYKEAI+DF YALVLEPTNKRA+ SA+RLRK+F
Sbjct: 544 NVKAYFRRGTAREMLGYYKEAIDDFKYALVLEPTNKRAASSAERLRKLF 592
>sp|Q9LVH5|OE64C_ARATH Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana
GN=OEP64 PE=1 SV=1
Length = 589
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/587 (72%), Positives = 491/587 (83%), Gaps = 10/587 (1%)
Query: 1 MASQSANLWVLLGLGLAGILLMTKKLKKNIKQDFGAFIEKLQLLPPPQPLPPKAPHPLTG 60
MASQ+ANLWVLLGLGLAGIL++TKKLKK +++DFGAFI+KL LLPPPQP PPKAPHPLTG
Sbjct: 1 MASQAANLWVLLGLGLAGILMLTKKLKKTVREDFGAFIDKLMLLPPPQPAPPKAPHPLTG 60
Query: 61 LSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSI 120
L+FAVSD+FDI GYVTGFGHP+W RTH AAS TS VVSTLVEGGATC+GKTVVDEFA+SI
Sbjct: 61 LTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFSI 120
Query: 121 NGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGF 180
+G NKHYD+PTNPAAP+++PGG+ SGAAVAVA + VDF+LGIDTVGGVRVP+ +CG+LGF
Sbjct: 121 SGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVLGF 180
Query: 181 RPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCF 240
+ SYGA+S+ GIIP+S+SLD+VGWFARDP LR VGHVLLQLPFA QR+PRQII+ADDCF
Sbjct: 181 KSSYGAISNTGIIPVSSSLDSVGWFARDPNTLRRVGHVLLQLPFATQRNPRQIILADDCF 240
Query: 241 ELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNG--------- 291
+LLKIP DR+ QVV KS EKLFGRQ+LKH+NL YF++KVPSLK F +T
Sbjct: 241 QLLKIPVDRITQVVTKSAEKLFGRQLLKHQNLETYFETKVPSLKEFARTKAIANTKVSTS 300
Query: 292 -ELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMR 350
L NVM+L+QR+EF NH +WI +VKPA+DP I +++ E E++ EN +IRNE R
Sbjct: 301 RLLANVMQLLQRHEFLQNHGDWINTVKPAIDPVILSQVCENPELTNEETENLNAIRNETR 360
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 410
AI SLLKDDGILV PT PPKLG KE+ SEDYQNRA SLLSIAS+SGCCQVTVPLG+
Sbjct: 361 VAIGSLLKDDGILVIPTLPAVPPKLGSKEITSEDYQNRASSLLSIASISGCCQVTVPLGH 420
Query: 411 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEK 470
++KCP SVSFI RHGGDRFLLDTVQ MY SLQE + I T K S +++SAEIAKEK
Sbjct: 421 HEKCPISVSFIGRHGGDRFLLDTVQTMYPSLQEYSSIVTDPKSSKKAITKEESAEIAKEK 480
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
GNQA+K+K W KAI Y+EAIKL+ NNATYYSNRAAAYLE G FLQAE DCTKAI LDKK
Sbjct: 481 GNQAFKEKLWQKAIGLYSEAIKLSDNNATYYSNRAAAYLELGGFLQAEEDCTKAITLDKK 540
Query: 531 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
NVKAYLRRGTAREMLG K AIEDF YALVLEP NKRASLSA+RLRK
Sbjct: 541 NVKAYLRRGTAREMLGDCKGAIEDFRYALVLEPNNKRASLSAERLRK 587
>sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana
GN=OM64 PE=1 SV=1
Length = 603
Score = 631 bits (1627), Expect = e-180, Method: Compositional matrix adjust.
Identities = 315/585 (53%), Positives = 412/585 (70%), Gaps = 15/585 (2%)
Query: 8 LWVLLGLGLAGILLMTKKLKKNIK----QDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSF 63
+WV++G+ +AGI+++ + K+ I+ +DFGAF+++ +LLP P P PP A L+GL+F
Sbjct: 17 VWVVIGVTVAGIVILAETRKRRIRALREEDFGAFLDRFELLPFPPPPPPAAKQSLSGLTF 76
Query: 64 AVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGT 123
++SD FD++ Y+TGFG P+W +TH AA +T+ VV+TL++ GATC+GKT++DE + I G
Sbjct: 77 SISDAFDVKDYITGFGCPQWKKTHEAAEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGE 136
Query: 124 NKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPS 183
NKHY TP NP P +PGG SSG+AV+V A+LVDFSLGIDT GGVRVP+AFCGILGFRPS
Sbjct: 137 NKHYGTPINPLMPDNVPGGCSSGSAVSVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPS 196
Query: 184 YGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELL 243
G VS +G++P S SL+TVGWFA DP +L VGH LL L R R +I ADD FEL
Sbjct: 197 QGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAVTHRRQRSLIFADDLFELS 256
Query: 244 KIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKN-------- 295
IP + VQVV K+ E L G + KH N+G+Y S VPSL F + +G+ +N
Sbjct: 257 DIPKQKSVQVVRKAIENLSGYKTPKHVNVGQYVASNVPSLAEFCEQSGKSQNSASTLRAL 316
Query: 296 --VMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAI 353
VM IQR+EFK NH EW ++ K L P S ++ L+ I++ ++NEMR+ I
Sbjct: 317 SSVMLAIQRHEFKTNHEEWWQTCKSFLGPRFSNDVVTALKSKNESIKSLYRVKNEMRATI 376
Query: 354 SSLLKDDGILVTPTTAYPPPKLGGKEMLS-EDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
SLLK+DGILV PT A PPP+L K S ++ +R ++L IAS+SGCCQVT+PLG +
Sbjct: 377 QSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSCIASMSGCCQVTIPLGEHG 436
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGN 472
P SVS + +GGD+FLLDT ++YASLQ+QA +A+ ++T +++E+ KEKGN
Sbjct: 437 DRPISVSLLTYYGGDKFLLDTTLDVYASLQDQAKLASNLAPVSDTNGNMEASEVMKEKGN 496
Query: 473 QAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNV 532
AYK KQW KA++FYTEAIKLNG NATYY NRAAA+LE F QAE DCTKA+ +DKKNV
Sbjct: 497 AAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCFQQAEQDCTKAMLIDKKNV 556
Query: 533 KAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 577
KAYLRRGTARE L YKEA DF +ALVLEP NK A ++ RLRK
Sbjct: 557 KAYLRRGTARESLVRYKEAAADFRHALVLEPQNKTAKVAEKRLRK 601
>sp|Q9FR37|AMI1_ARATH Amidase 1 OS=Arabidopsis thaliana GN=AMI1 PE=1 SV=1
Length = 425
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 286/423 (67%), Gaps = 17/423 (4%)
Query: 31 KQDFGAFIEKLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAA 90
DFGAFIEK+ + +P L GL+FA+ D+FD+EG VTGFG+P+W RTHSAA
Sbjct: 4 NNDFGAFIEKVTIS---PTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAA 60
Query: 91 SRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVA 150
+ T+ VVS+L+E GAT +G T++DE AYSING N HY TP NP A ++PGGSSSG+AVA
Sbjct: 61 TSTAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVA 120
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VAA LVDFS+G DT G VRVP+++CGI GFRPS+GAVS +G+ P++ S DTVGWFARD
Sbjct: 121 VAARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTA 180
Query: 211 ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLF-GRQVLKH 269
L+ VG VLLQ P Q+IIADDCF+L +P D +VQ ++ S EK F G V+K
Sbjct: 181 TLKRVGCVLLQQHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVKK 240
Query: 270 ENLGEYFDSKVPSLKGFHKTNG-------------ELKNVMRLIQRYEFKNNHNEWIESV 316
NLGEY VPSLK F ++ L + MRL+QR+EFK NH WI SV
Sbjct: 241 VNLGEYIGQNVPSLKHFMTSDDVTTQQEFCIPSLMALSSSMRLLQRHEFKINHGAWISSV 300
Query: 317 KPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLG 376
KP P IS I E + S+ I++C+S+++E+ +A+S+LL + G+LV PT PPP L
Sbjct: 301 KPEFGPGISERIEEAIRTSDEKIDHCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHLQ 360
Query: 377 GKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQN 436
E +++RAFSLLSIA VSG CQV++PLG ++ P SVS +A++G D FLL V +
Sbjct: 361 ANVAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFLLSLVDS 420
Query: 437 MYA 439
+ A
Sbjct: 421 LAA 423
>sp|Q8PXJ1|GATA_METMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=gatA PE=3 SV=1
Length = 476
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 182/431 (42%), Gaps = 58/431 (13%)
Query: 57 PLTGLSFAVSDLFDI------------EGYVTGFGHPEWARTHSAASRTSTVVSTLVEGG 104
PL G+ A+ D + EGYV F + V+ L+ G
Sbjct: 61 PLAGVPIAIKDNISVVGLPNSCGSKILEGYVPPF--------------NAHVIEKLLSAG 106
Query: 105 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDT 164
A +GKT +DEFA + H+ NP ++PGGSS G+A VAA F+LG DT
Sbjct: 107 AVILGKTNMDEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDT 166
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRHV--GHVL 219
G VR P++FCG++G +P+YGAVS G++ + SL+ VG A D +L V G+
Sbjct: 167 GGSVRCPASFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAVLMDVIAGYDR 226
Query: 220 LQLPFAAQRSPRQIIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS 278
++ Q + DD L + +P + + + EK + K E+LG ++
Sbjct: 227 RDSTSIDSKTEYQKALVDDVKGLKIGVPKEFFGEGIHPDVEKAVWDAIHKCESLGATWEE 286
Query: 279 -KVPSLK----GFH--KTNGELKNVMRLI-QRYEFKNNHNEWIESVKPALDPDISAEIGE 330
+P +K ++ + N+ R RY F+ W V E+
Sbjct: 287 VSMPHIKYALASYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKR 346
Query: 331 MLEISETVIENCKSIRNEMRS-AISSLLKDD--------GILVTPTTAYPPPKLGGKEML 381
+ + + + +++ + +L+K D +L+ PT P K+G K
Sbjct: 347 RILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKVDLLMAPTMPNPAFKIGEK--- 403
Query: 382 SEDYQNRAFSLLSIASV--SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
ED S ++ + +G ++VP G+ D P + + G F +TV
Sbjct: 404 IEDPLTLYLSDINTCPINLAGVPSISVPCGFTDGLPIGLQIM----GKPFDEETVLRAAY 459
Query: 440 SLQEQADIATK 450
+ ++ D TK
Sbjct: 460 TFEKNTDYHTK 470
>sp|Q8THJ1|GATA_METAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=gatA PE=3 SV=1
Length = 476
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 182/431 (42%), Gaps = 58/431 (13%)
Query: 57 PLTGLSFAVSDLFDI------------EGYVTGFGHPEWARTHSAASRTSTVVSTLVEGG 104
PL G+ A+ D + EGYV F + V+ L++ G
Sbjct: 61 PLAGVPIAIKDNISVVGLPNSCGSKILEGYVPPF--------------NAHVIEKLLDAG 106
Query: 105 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDT 164
A +GKT +DEFA + +Y NP ++PGGSS G+A VAA F+LG DT
Sbjct: 107 AVILGKTNLDEFAMGSSTETSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDT 166
Query: 165 VGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA---RDPKILRHV--GHVL 219
G VR P+AFCG++G +P+YGAVS G++ + SL+ VG A D IL V G+
Sbjct: 167 GGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAILMDVIAGYDR 226
Query: 220 LQLPFAAQRSPRQIIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYF-D 277
++ Q + DD L + +P + + + EK + K E+LG +
Sbjct: 227 RDSTSIDSKTEYQKALVDDVKGLKIGVPKEFFGEGIHPGVEKAVWNAIHKFESLGATRQE 286
Query: 278 SKVP----SLKGFH--KTNGELKNVMRLI-QRYEFKNNHNEWIESVKPALDPDISAEIGE 330
+P +L ++ + N+ R RY F+ N W V E+
Sbjct: 287 VSMPNINYALASYYIIAMSEASSNLARFDGTRYGFRANGENWHAMVSKTRAEGFGTEVKR 346
Query: 331 MLEISETVIENCKSIRNEMRS-AISSLLKDD--------GILVTPTTAYPPPKLGGKEML 381
+ + + + +++ + +L+K D +L+ PT P ++G K
Sbjct: 347 RILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSTVDLLMAPTMPNPAFRIGEK--- 403
Query: 382 SEDYQNRAFSLLSIASV--SGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMYA 439
ED S ++ + +G V+VP G+ D P + + G F TV
Sbjct: 404 IEDPLTLYLSDVNTCPINLAGVPSVSVPCGFTDGLPVGLQIM----GKPFDEPTVLRAAY 459
Query: 440 SLQEQADIATK 450
+ ++ D TK
Sbjct: 460 TFEKNTDYHTK 470
>sp|Q5X4H5|GATA_LEGPA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Paris) GN=gatA PE=3 SV=1
Length = 483
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 185/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++PGGSS G+A AVA +LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGEYFDSKV 280
D +K P D++ +Q I + KLF ENLG
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHNAVKLF-------ENLGAEIIEID 294
Query: 281 PSLKGF------------HKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
L+ F +N + +R R + + IE + + E+
Sbjct: 295 LKLQPFWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + + L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++ QN + ++A+ ++G +++P G+ +K P + + +H + LL
Sbjct: 410 KINDPIQNYLADVFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>sp|P47345|GATA_MYCGE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=gatA PE=3 SV=1
Length = 477
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 93 TSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVA 152
++TV L GA +GK +DEF G+ + +P S + GGSSSG+A AVA
Sbjct: 93 SATVFELLEMNGALLVGKANMDEFGLGGTGSYSAFGVVHHPENSSLIAGGSSSGSAYAVA 152
Query: 153 ADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKIL 212
D+V FS+ DT +R P++ C ++GF+P+YG +S G+ P + S+D VG FA+ +
Sbjct: 153 KDIVPFSIATDTGDSIRRPASICNVVGFKPTYGLISRNGVFPYAPSMDHVGIFAKFVSDI 212
Query: 213 RHVGHVLL---QLPFAAQRSPRQIIIADDCFELLKIPADRVVQV-VIKSTEKLFGRQVLK 268
V V++ + F++Q+SP + + F L IP R ++ +K EKLF + + K
Sbjct: 213 AIVSDVVIKHDKTDFSSQKSPDE----NQFFNELAIPFTRSIRFGYLKPLEKLFNKHLQK 268
Query: 269 HEN 271
N
Sbjct: 269 KWN 271
>sp|Q5WVW0|GATA_LEGPL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Lens) GN=gatA PE=3 SV=1
Length = 483
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 184/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++PGGSS G+A AVA LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSADRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGE---YFD 277
D +K P D++ +Q I KLF ENLG D
Sbjct: 242 PDYSTEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLF-------ENLGAEIIEID 294
Query: 278 SKVPSL---------KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
K+ L +N + +R R + + IE + + E+
Sbjct: 295 LKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + ++L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITILNSVDVILGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ + QN + ++A+ ++G +++P G+ +K P + + +H + LL
Sbjct: 410 KIDDPIQNYLADVFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSENRLL 462
>sp|A5ICP2|GATA_LEGPC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Corby) GN=gatA PE=3 SV=1
Length = 483
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++PGGSS G+A AVA +LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGE---YFD 277
D +K P D++ +Q I KLF ENLG D
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLF-------ENLGAEIIEID 294
Query: 278 SKVPSL---------KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
K+ L +N + +R R + + IE + + E+
Sbjct: 295 LKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + + L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSTGFFNAYYLHAQKVRRLIRDELITTLNSVDVIIGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+++ QN + ++A+ ++G +++P G+ +K P + + +H + LL
Sbjct: 410 KINDPIQNYLADVFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>sp|A5GTM0|GATA_SYNR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain RCC307) GN=gatA PE=3 SV=1
Length = 485
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 20/162 (12%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT---------STVVSTLVEGGA 105
P PL G++ + D +G T + +SR STV L + GA
Sbjct: 63 PGPLAGVTIGIKDNLCTKGVTT-----------TCSSRMLENFVPPYESTVTERLWKAGA 111
Query: 106 TCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTV 165
+GKT +DEFA + + +NP P ++PGGSS G+A VAA D +LG DT
Sbjct: 112 VMVGKTNLDEFAMGSSTETSAFGMTSNPWDPGRVPGGSSGGSAACVAAGQCDVALGSDTG 171
Query: 166 GGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G +R P++FCG++G +P+YG VS G++ ++SLD +G F+R
Sbjct: 172 GSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPFSR 213
>sp|Q3ZYM5|GATA_DEHSC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
sp. (strain CBDB1) GN=gatA PE=3 SV=1
Length = 486
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PLTG+ A+ D+ +G T + + VV L + GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + N Y T NP ++PGGSS G+A VAA FSLG DT G +R P++FC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+ G++PSYG VS G++ ++SLD +G F +D
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
>sp|Q9RTA9|GATA_DEIRA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=gatA PE=3 SV=1
Length = 482
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 175/410 (42%), Gaps = 65/410 (15%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ V D ++ G T G A S T+T L GA +GK +DEF
Sbjct: 66 PLAGVPIVVKDNINVTGTRTTCGSRMLANYVS--PYTATAAQKLQGAGAVIVGKANMDEF 123
Query: 117 AYSINGTNKHYDTPT-NPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A + T PT NP ++PGGSS G+AVAVAA + SLG DT G VR P+A C
Sbjct: 124 AMG-SSTESSASGPTLNPWDHERVPGGSSGGSAVAVAAGISPVSLGSDTGGSVRQPAALC 182
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIII 235
G+ GF+P+YG VS G++ ++SLD +G FAR + L + +V+ A PR
Sbjct: 183 GVYGFKPTYGRVSRYGLVAYASSLDQIGPFARSAEDLALLMNVI------AGHDPRDATS 236
Query: 236 ADDCFELLKIPAD--RVVQV-VIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
D AD R ++V VI+ E L G LG D +L+G GE
Sbjct: 237 LDAPARFAVGGADSLRGLRVGVIR--ESLGGNTPGVEAALGATLD----ALRGAGAVVGE 290
Query: 293 LK--------NVMRLIQRYEFKNN--------HNEWIESVKPALDPDISAEIGEMLEISE 336
+ LI E +N + E + ++ E G E+
Sbjct: 291 VSIPELEYAIAAYYLIAMPEASSNLARYDGMVYGERVPGGDVTRSMTLTREQGFGQEVQR 350
Query: 337 TVIENCKSIRNEMRSA-------ISSLLKDD--------GILVTPTTAYPPPKLGGK--- 378
++ ++ + A + L+ D+ +LVTPT+ +P + G K
Sbjct: 351 RILLGTYALSSGYYDAYYAKAMKVRRLIADEFTTAFGQYDVLVTPTSPFPAFRRGEKASD 410
Query: 379 --EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD----KCPTSVSFIA 422
M + D A +L +G ++VP G+ + + P V FIA
Sbjct: 411 PLAMYAADVDTVAVNL------AGLPALSVPAGFEEVDGKRLPVGVQFIA 454
>sp|A5FQ07|GATA_DEHSB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
sp. (strain BAV1) GN=gatA PE=3 SV=1
Length = 486
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDE 115
PLTG+ A+ D+ +G T + + VV L + GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 116 FAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
FA + N Y T NP ++PGGSS G+A VAA FSLG DT G +R P++FC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+ G++PSYG VS G++ ++SLD +G F +D
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
>sp|Q3Z6V3|GATA_DEHE1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
ethenogenes (strain 195) GN=gatA PE=3 SV=1
Length = 486
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 20/162 (12%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASR---------TSTVVSTLVEGGAT 106
PLTG+ A+ D+ +G T + +SR + VV L E GA
Sbjct: 69 RPLTGIPMALKDVLCTKGIRT-----------TCSSRMLENFVPPYNAHVVDKLAEEGAV 117
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
+GKT +DEFA + N + T NP +++PGGSS G+A VAA FSLG DT G
Sbjct: 118 LLGKTNMDEFAMGSSTENSAFFTTHNPWNTAKVPGGSSGGSAACVAASEAVFSLGSDTGG 177
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
+R P++FC + G +PSYG VS G++ ++SLD +G F +D
Sbjct: 178 SIRQPASFCSVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
>sp|Q5ZUQ7|GATA_LEGPH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=gatA PE=3 SV=1
Length = 483
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 184/413 (44%), Gaps = 54/413 (13%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PLTG+ A+ DLF + T A A +T+V+ + GA IGKT +DEF
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N ++ + NP ++ GGSS G+A AVA +LV F++G DT G +R P+AFCG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVSGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIA 236
I G +P+YG VS G++ ++SLD G FA+ + L + H + S ++I
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCMAGFDSKDSTSVDRVI-- 241
Query: 237 DDCFELLKIPADRV----------------VQVVIKSTEKLFGRQVLKHENLGE---YFD 277
D +K P D++ +Q I KLF ENLG D
Sbjct: 242 PDYSAEIKNPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLF-------ENLGAEIIEID 294
Query: 278 SKVPSL---------KGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEI 328
K+ L +N + +R R + + IE + + E+
Sbjct: 295 LKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHR---SKSASTLIELITNSRSEGFGNEV 351
Query: 329 GEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKE 379
+ V+ + + +R +R + + L +++ PTT KLG E
Sbjct: 352 KRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLG--E 409
Query: 380 MLSEDYQNRAFSLLSIAS-VSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
+ + QN + ++A+ ++G V++P G+ +K P + +++H + LL
Sbjct: 410 KIDDPIQNYLADVFTVAANLAGLPAVSIPTGFENKLPIGLQLMSKHFSENRLL 462
>sp|Q12VH1|GATA_METBU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcoides
burtonii (strain DSM 6242) GN=gatA PE=3 SV=1
Length = 475
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 171/400 (42%), Gaps = 44/400 (11%)
Query: 57 PLTGLSFAVSDLFDIEGYVT--------GFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
PL G+ A+ D +G T G+ P A V+ L E GA I
Sbjct: 60 PLAGVPIAIKDNISTKGLATTCSSKILEGYVPPYDAH----------VIERLKEAGAVII 109
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
GKT +DEFA + + Y NP ++PGGSS G+A VAA SLG DT G V
Sbjct: 110 GKTNMDEFAMGTSTESSCYGVTLNPWDHERVPGGSSGGSAAVVAAGEAPISLGSDTGGSV 169
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV-----GHVLLQLP 223
R P+AFCG++G +P+YGAVS G+I + SL+ +G A + + V G+
Sbjct: 170 RCPAAFCGVVGLKPTYGAVSRYGLISYANSLEQIGPMATCVEDIAAVMDVIGGYDARDST 229
Query: 224 FAAQRSPRQIIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVP 281
++ Q + DD L + +P + + V TE + K+E + ++ +P
Sbjct: 230 SIDKKIDHQAALIDDVKGLKIGVPDEYFGEGVDSGTENAVWDAINKYEEMDASWEKVSMP 289
Query: 282 ----SLKGFHK--TNGELKNVMRLI-QRYEFKNNHNEWIESVKPALDPDISAEIGEMLEI 334
+L ++ + N+ R RY +N+ W + E+ + +
Sbjct: 290 NTKYALAAYYTIAMSEASSNLARFDGTRYGPRNDGENWHVMASKTRAENFGKEVQRRILL 349
Query: 335 SETVIENCKSIRNEMRS-AISSLLKDD--------GILVTPTTAYPPPKLGGKEMLSEDY 385
+ + +++ + +L+K D +L+ PT P K+G EM+ +
Sbjct: 350 GTYALSAGYQDKYYLKALQVRTLVKQDFDRAFANFDVLMAPTMPLPAFKIG--EMVEDPL 407
Query: 386 QNRAFSLLSI-ASVSGCCQVTVPLGYYDKCPTSVSFIARH 424
+ ++ +++G ++VP G D P + I H
Sbjct: 408 SQYLIDVNTVPMNLAGVPCISVPCGSSDGLPVGLQIIGNH 447
>sp|Q971U6|GATA_SULTO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfolobus
tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
7) GN=gatA PE=3 SV=2
Length = 472
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 174/379 (45%), Gaps = 42/379 (11%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+TV+ L + GA +GKT +DEFA ++ NP + PGGSS G+ A+AA
Sbjct: 95 ATVIEKLKQEGAVILGKTNMDEFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAA 154
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR------ 207
+VD +LG DT G +R P+A+ + G +PSYG VS G++ + SL+ +G A+
Sbjct: 155 GIVDIALGSDTGGSIRAPAAYNAVFGLKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLA 214
Query: 208 ---------DPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKST 258
DPK + H Q+P + +I + D E P VV + +
Sbjct: 215 LLYSIISGDDPKDATTI-HFEPQVPEKVELKDVKIAVLKDIVEASDKP---VVSIFNSTL 270
Query: 259 EKLFGR-QVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQ-RYEF-KNNHNEWIES 315
+KL ++K NLG Y + +P+ + N+ R RY + K + W E+
Sbjct: 271 DKLSSEGAIIKEVNLG-YAEYALPAYYIIAMSEAS-SNLARFDGVRYGYSKYSEGNWRET 328
Query: 316 VKPALDPDISAEIGEMLEISETVIE---------NCKSIRNEMRSAISSLLKDDGILVTP 366
E+ + + ++ IR ++ + ++LK+ ++ +P
Sbjct: 329 FAKNRGEGFGIEVKRRILLGSFILSAGYYEEFYIKALKIRRLIKDNVDNILKEFDLIASP 388
Query: 367 TTAYPPPKLGGKEMLSEDYQNRAFSLLS-IASVSGCCQVTVPLGYYDKCPTSVSFIARHG 425
T PPK+G E++ + + A L + IA+++G ++ P G+Y+ P + + R+
Sbjct: 389 TMPILPPKIG--EVVEDPIKMYAMDLNTVIANLAGVPALSQPAGFYNNLPIGLQLMGRYL 446
Query: 426 GDRFLL------DTVQNMY 438
D +++ + V N+Y
Sbjct: 447 SDYYIMAISAKIEKVLNLY 465
>sp|C1D1L2|GATA_DEIDV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gatA
PE=3 SV=1
Length = 487
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 94/167 (56%), Gaps = 9/167 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ V D ++ G T G A S T+T L++ GA +GK +DEF
Sbjct: 66 PLAGVPVIVKDNINVSGTRTTCGSRILATYVS--PYTATAAQRLIDAGAVIVGKANMDEF 123
Query: 117 AYSINGTNKHYDTPT-NPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFC 175
A + T PT NP S++PGGSS G+AVAVAA+L SLG DT G VR P+A
Sbjct: 124 AMG-SSTESSASGPTLNPWDLSRVPGGSSGGSAVAVAANLTPVSLGSDTGGSVRQPAALT 182
Query: 176 GILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKILRHV--GH 217
G+ G +P+YG VS G++ ++SLD +G FAR D +L +V GH
Sbjct: 183 GVYGLKPTYGRVSRYGLVAYASSLDQIGPFARSAADLALLMNVVAGH 229
>sp|Q1J0C2|GATA_DEIGD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1
Length = 483
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ V D ++ G T G A + + +T V L GA IGK +DEF
Sbjct: 66 PLAGVPIVVKDNLNVIGTRTTCGSRILA--NYVSPYDATAVERLTGAGAVIIGKANMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + + + NP ++PGGSS G+AVAVAA+L +LG DT G VR P+AF G
Sbjct: 124 AMGSSTESSAWGPTLNPWDRERVPGGSSGGSAVAVAANLTPVALGSDTGGSVRQPAAFTG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
I G +P+YG VS G++ ++SLD +G FAR L + +VL
Sbjct: 184 IYGLKPTYGRVSRYGLVAYASSLDQIGPFARSAADLALLMNVL 226
>sp|A9M003|GATA_NEIM0 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup C (strain 053442) GN=gatA PE=3
SV=1
Length = 481
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
LTG+ A D+F G+ + S S T+TVV L++ G +G+T +DEFA
Sbjct: 68 LTGIPVAYKDIFCQTGWRSACASKMLDNFIS--SYTATVVQNLLDEGMVTLGRTNMDEFA 125
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
N Y NP P +PGGSS G+A VAA L +LG DT G +R P++ CGI
Sbjct: 126 MGSTNENSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
G +P+YG VS G++ ++S D G A+
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQ 215
>sp|Q1IUE4|GATA_KORVE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Koribacter
versatilis (strain Ellin345) GN=gatA PE=3 SV=1
Length = 480
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGH---PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
L GL A+ D+ +G T G E+ + A TVV L GA +GKT D
Sbjct: 71 LAGLPVAIKDVISTKGVRTTAGSKILEEFIAPYDA-----TVVQKLEAAGAVILGKTNCD 125
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA + N Y NP S++PGGSS G+A VAA SLG DT G +R P++F
Sbjct: 126 EFAMGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASF 185
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
CG++G P+YG VS G+I ++SLD +G FA+D K
Sbjct: 186 CGVVGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVK 221
>sp|Q2NHN5|GATA_METST Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=gatA PE=3 SV=1
Length = 455
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 183/391 (46%), Gaps = 21/391 (5%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
L GL + ++E ++ P + S +TV++ +++ IG T +DEFA
Sbjct: 66 LAGLVIGIKSNINVEDFIISAASPTLKNYY--GSYNATVINRILDEDGVIIGLTNMDEFA 123
Query: 118 YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGI 177
+ Y NP AP +PGGSS G+A A+AA++ D +LG DT G +R P++ CG+
Sbjct: 124 AGSSTETSMYGPTNNPKAPGHIPGGSSGGSAAAIAANMCDITLGSDTGGSIRNPASHCGV 183
Query: 178 LGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQL-PFAAQRSPRQ--II 234
+GF+P+YG VS G++ ++ SLD +G FA D + + +V+ P+ +Q
Sbjct: 184 MGFKPTYGMVSRQGLLDLAMSLDQIGPFANDTTGIGLMLNVICGYDPYDTTTINKQPEDF 243
Query: 235 IADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELK 294
+ D L+ VV+ + T+ Q+ K + +++ L F N L
Sbjct: 244 LKDTTNSTLEGQTIGVVKEFMDITDDKITSQINKSIDDMTSLGAEIKELS-FEDINLGLP 302
Query: 295 NVMRLIQRYEF-----KNNHNEWIESVKPALDPDIS--AEIGEML---EISETVIENCKS 344
LI EF K + ++ E ++ +++ EIG + E S
Sbjct: 303 -TYYLINYVEFFSATRKYDGRKYGERIEEVCGAEVARRIEIGSYISQKEFSGKYYNKALQ 361
Query: 345 IRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI-ASVSGCCQ 403
R+ +R+ + LL D ++ PT P K+ G+E+ + D A+ +L++ A+++G
Sbjct: 362 ARSLIRNEFNELLNDVDVIAGPTVPKLPHKI-GEEIETMDM--YAYDVLTVLANITGIPA 418
Query: 404 VTVPLGYYDKCPTSVSFIARHGGDRFLLDTV 434
++ G D P + A+ D +L T+
Sbjct: 419 SSMNSGLVDNIPVGLQLQAKPEDDHKILSTM 449
>sp|Q46E35|GATA_METBF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1
Length = 475
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 170/392 (43%), Gaps = 30/392 (7%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ D + G G + V+ L+ GA +GKT +DEF
Sbjct: 60 PLAGVPIAIKDNISVVGLPNSCGSK--ILEDYIPPFNAYVIEKLLAAGAVILGKTNMDEF 117
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + ++ NP ++PGGSS G+A VAA F+LG DT G VR P+AFCG
Sbjct: 118 AMGSSTETSYFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCG 177
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR---DPKILRHV--GHVLLQLPFAAQRSPR 231
++G +P+YGAVS G++ + SL+ VG A D +L V G+ ++
Sbjct: 178 VVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVTDIAVLMDVIAGYDRKDSTSIDSKTEY 237
Query: 232 QIIIADDCFEL-LKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDS-KVPSLK----G 285
Q + +D L + +P + + + EK + K E+LG ++ +P +K
Sbjct: 238 QKALIEDVKGLKIGVPKEFFGEGIHPDVEKAVWNAIHKCEDLGASWEEVSMPHIKYALAS 297
Query: 286 FH--KTNGELKNVMRLI-QRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENC 342
++ + N+ R RY ++ + W V E+ + + +
Sbjct: 298 YYIIAMSEASSNLARFDGTRYGYRASGENWHAMVSKTRAEGFGTEVKRRILLGTYALSAG 357
Query: 343 KSIRNEMRS-AISSLLKDD--------GILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL 393
+ +++ + +L+K D +L+ PT P K+G K ED S +
Sbjct: 358 YHDKYYLKALKVRTLVKQDFDKALSKVDVLMAPTMPNPAFKIGEK---IEDPLTLYLSDV 414
Query: 394 SIASV--SGCCQVTVPLGYYDKCPTSVSFIAR 423
+ + +G ++VP G+ D P + + +
Sbjct: 415 NTCPINLAGVPSLSVPCGFTDGLPIGLQIMGK 446
>sp|Q2S4S2|GATA_SALRD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber
(strain DSM 13855 / M31) GN=gatA PE=3 SV=1
Length = 514
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 55 PHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
P PL GL AV D I GY G A S +TV+ L + GA IGKT D
Sbjct: 65 PRPLAGLVLAVKDNICIRGYPVSCGSKMLADFSSLYD--ATVIDRLRDAGAIFIGKTNCD 122
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA + H+ NP AP +PGGSS G+A AVAA L +LG DT G VR P+AF
Sbjct: 123 EFAMGSSNETSHFGPVRNPHAPEYVPGGSSGGSAAAVAAGLCHAALGSDTGGSVRQPAAF 182
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
CG +G +P+YG VS G++ ++SLD +G R
Sbjct: 183 CGTVGLKPTYGRVSRSGLVAFASSLDVIGPLTR 215
>sp|Q58560|GATA_METJA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=gatA PE=3 SV=1
Length = 434
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 186/405 (45%), Gaps = 57/405 (14%)
Query: 56 HPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT---------STVVSTLVEGGAT 106
PL G V ++EGY T S AS+T +TV+ + E G
Sbjct: 47 KPLYGKIIVVKANINVEGY-----------TISCASKTLENYIAPYDATVIEKIKENGGL 95
Query: 107 CIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVG 166
IG +DEFA +G ++ NP A ++PGGSSSG+A AV+ADL D +LG DT G
Sbjct: 96 IIGIANMDEFACGSSGETSYFGPTKNPRAKDRIPGGSSSGSAAAVSADLCDMALGSDTGG 155
Query: 167 GVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWF---ARDPKILRHV--GHVLLQ 221
+R P++ CG++GF+PSYG VS G+ ++ S D +G A D +L ++ G L
Sbjct: 156 SIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIGPLTKTAEDALLLTNIIKGKDLRD 215
Query: 222 L------PFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTE--KLFGRQVLKHENLG 273
PF ++ + E + + +++ V K+ E K G +++ E
Sbjct: 216 TTTVETKPF--EKKDIKGFKVGVVKEFMDVADEKIRDKVEKAIEVFKDLGCEIV--ELSY 271
Query: 274 EYFDSKVPSLKGFHKTN-GELKNVMRLI--QRYEFKNNHNEWIESVKPALDPDISAEIGE 330
+Y D +P+ ++ N E + R +RY +K E ++ + IG
Sbjct: 272 KYVDLALPT---YYLINYVEFFSSTRRYDGRRYGYKIEEVCGEEVLRRIM-------IGS 321
Query: 331 ML---EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN 387
M+ E S +N RN MR+ + ++KD I+V T P KLG K E Y
Sbjct: 322 MISQKEYSGKYYKNALKARNLMRNEMIKIMKDVDIIVGATVPKLPHKLGEKLTPMEMY-- 379
Query: 388 RAFSLLSI-ASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLL 431
++ +L++ A++ G C VP G + P + + D +L
Sbjct: 380 -SYDVLTVPANICGLCAGVVPCGDINGIPVGLQIQGKPFEDEKVL 423
>sp|C4YRY0|GATA_CANAW Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Candida albicans (strain WO-1) GN=HER2 PE=3 SV=1
Length = 450
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 97/170 (57%), Gaps = 4/170 (2%)
Query: 51 PPKAPHPLTGLSFAVSD-LFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
P + PL+G ++ V D + GY T ++ + +T++ L G+ IG
Sbjct: 32 PTNSTGPLSGTTYIVKDNIATSHGYTTAASK---ILSNYESPFNATIIDLLSSNGSKLIG 88
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
K+ +DEF N +++ TNP +++PGGSS G+A +VA + FS+G DT G VR
Sbjct: 89 KSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVR 148
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
+P+++C + GF+P+YG +S G+IP + +LDTVG + I++ V VL
Sbjct: 149 LPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVL 198
>sp|Q2FQM9|GATA_METHJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1
Length = 431
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 187/428 (43%), Gaps = 63/428 (14%)
Query: 57 PLTGLSFAVSDLFDIEGYVT--------GFGHPEWARTHSAASRTSTVVSTLVEGGATCI 108
PL+G++ AV D +G T G+ P A VV+ L GA +
Sbjct: 28 PLSGVTVAVKDNISTKGIETTCASKILKGYIPPYDAH----------VVTLLKNAGAAIV 77
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
GKT +DEF N Y NP ++PGGSS G+A AVAA LVD ++G DT G +
Sbjct: 78 GKTNMDEFGMGTTTENSAYGPTLNPLDHQRVPGGSSGGSAAAVAAGLVDCAIGSDTGGSI 137
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQR 228
R P+AFCGI+G +P+YG VS G+I + SL+ +G ARD + L ++ V+ A
Sbjct: 138 RCPAAFCGIVGLKPTYGRVSRFGLIAYANSLEQIGPMARDVQTLSNLYSVI------AGH 191
Query: 229 SPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFG-----------RQVLKH-ENLGEY- 275
R D ++ P + + I ++ FG RQ + E++G
Sbjct: 192 DSRDATSVDKPYK--HNPVSDITGLKIGVPDEFFGEGVNPNVAEVVRQAIDTLESMGATA 249
Query: 276 FDSKVPSLK----GFHK--TNGELKNVMRLIQ-RY-----EFKNNHNEWIESVKPALDPD 323
+PS+K ++ T+ N+ R RY K+ H+ + E K +
Sbjct: 250 VPCTIPSMKYALSAYYVTCTSEASSNLARFDGVRYGPAVGTLKSWHDAYSEQRKAGFGKE 309
Query: 324 ISAEI-----GEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGK 378
+ I + ++ R +R + +D ++ PT KLG K
Sbjct: 310 VRRRIILGTFSLAAGYYGRYYQKAQTARQMVRDDFERIFRDVDVIAGPTMPDIAFKLGEK 369
Query: 379 EMLSEDYQNRAFSLLSI-ASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNM 437
S+ Q +L++ A+++G ++VP G + P + I R+ D ++DT
Sbjct: 370 ---SDPLQMYLSDILTVPANLAGVPALSVPCGKINSMPVGLQLIGRYFEDERIIDTA--- 423
Query: 438 YASLQEQA 445
YA Q +A
Sbjct: 424 YAYEQGRA 431
>sp|Q5AK64|GATA_CANAL Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=HER2 PE=3 SV=1
Length = 450
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Query: 51 PPKAPHPLTGLSFAVSD-LFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIG 109
P + PL+G ++ V D + GY T ++ + + ++ L G+ IG
Sbjct: 32 PTNSTGPLSGTTYIVKDNIATSHGYTTAASK---ILSNYESPFNAMIIDLLSSNGSKLIG 88
Query: 110 KTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVR 169
K+ +DEF N +++ TNP +++PGGSS G+A +VA + FS+G DT G VR
Sbjct: 89 KSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVR 148
Query: 170 VPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 219
+P+++C + GF+P+YG +S G+IP + +LDTVG + I++ V VL
Sbjct: 149 LPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVL 198
>sp|A0LP22|GATA_SYNFM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1
Length = 486
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ D+ ++G VT G + TV++ L E GA +GKT +DEF
Sbjct: 69 PLAGIPLAIKDVLCMQGTVTTCG--SRILENFVPPYDGTVIARLREAGAIFLGKTNMDEF 126
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N Y NP ++PGGSS G+A AVAADL SLG DT G +R P++FCG
Sbjct: 127 AMGSSTENSAYGVTRNPWDRERVPGGSSGGSAAAVAADLCSGSLGTDTGGSIRQPASFCG 186
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
++G +P+YG VS G++ ++SLD +G +D
Sbjct: 187 VVGLKPTYGRVSRFGLVAFASSLDQIGPITKD 218
>sp|B0TDK7|GATA_HELMI Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Heliobacterium
modesticaldum (strain ATCC 51547 / Ice1) GN=gatA PE=3
SV=1
Length = 487
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 81/126 (64%), Gaps = 3/126 (2%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
+TVV+ L E GA +GKT +DEFA + N + NP ++PGGSS G+A +VAA
Sbjct: 105 ATVVTKLKEAGAVMMGKTNLDEFAMGSSTENSGFFATCNPWDIERVPGGSSGGSAASVAA 164
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILR 213
FSLG DT G +R P+AFCG++G +P+YGAVS G+I ++SLD +G F RD +R
Sbjct: 165 GQAVFSLGSDTGGSIRQPAAFCGVVGLKPTYGAVSRFGLIAFASSLDQIGPFTRD---VR 221
Query: 214 HVGHVL 219
HV+
Sbjct: 222 DCAHVM 227
>sp|Q03557|GATA_YEAST Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=HER2 PE=1 SV=1
Length = 464
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQ---MPGGSSSGAAVA 150
+TVV L + G +GKT +DEF G + NP P + + GGSSSGAA +
Sbjct: 78 ATVVKLLKQAGVHILGKTNLDEFGMGSGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAAS 137
Query: 151 VAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 210
VA DLVDF+LG DT G VR+P+ + +LGF+PSYG +S G+I S SLDTVG ++
Sbjct: 138 VACDLVDFALGTDTGGSVRLPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKIN 197
Query: 211 ILRHVGHVL 219
+LR V H L
Sbjct: 198 VLRKVFHTL 206
>sp|A5WCI2|GATA_PSYWF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter sp.
(strain PRwf-1) GN=gatA PE=3 SV=1
Length = 499
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAAS-RTSTVVSTLVEGGATCIGKTVVDEF 116
L GL A DLF +G +T G H+ S +T+VS + E GA C+GK +DEF
Sbjct: 71 LLGLPMAHKDLFCTKGLLTTSGSKIL---HNFVSPYDATIVSNIREAGAVCLGKLNMDEF 127
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + + +Y NP S++PGGSS G+A AVAA V F+ G DT G +R P++FCG
Sbjct: 128 AMGSDNESSYYGAVHNPWDLSRVPGGSSGGSAAAVAAGFVPFATGSDTGGSIRQPASFCG 187
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
+ G +P+YG VS G+I ++SLD G F R
Sbjct: 188 LTGIKPTYGRVSRFGMIAYASSLDQAGTFGR 218
>sp|Q5V2G6|GATA_HALMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=gatA PE=3 SV=1
Length = 425
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHP---EWARTHSAASRTSTVVSTLVEGGATCIGKTVV 113
PL G + AV D EG T G ++ + A TVV L + GAT GKT +
Sbjct: 20 PLAGKTVAVKDNISTEGVRTTCGSAMLEDYVPPYDA-----TVVERLKDAGATIPGKTNM 74
Query: 114 DEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
DEF + NPAA ++PGGSS G+A VAA D +LG DT G +R P+A
Sbjct: 75 DEFGMGTTTETSAFGAVENPAAEGRVPGGSSGGSAAVVAAGDADLALGSDTGGSIRCPAA 134
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
FCG++G +P+YG VS G+I + SL+ +G A
Sbjct: 135 FCGVVGIKPTYGLVSRYGLIAYANSLEQIGPIA 167
>sp|C6BSE9|GATA_DESAD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio
salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /
VKM B-1763) GN=gatA PE=3 SV=1
Length = 487
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 52 PKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKT 111
P A PL G+ + D G T G ST V+ L E GA +GK
Sbjct: 64 PDASKPLWGVPVVIKDALATNGIPTTAGSK--ILEGFTPFYDSTAVAKLKEAGAIIVGKA 121
Query: 112 VVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVP 171
+DEFA N Y T TNP S++PGGSS G+ VAA +LG DT G +R+P
Sbjct: 122 NMDEFAMGSTTENSAYQTTTNPWDASRVPGGSSGGSGATVAAGQCYAALGTDTGGSIRLP 181
Query: 172 SAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
++FCG +G +P+YG VS G+I +SLD +G R
Sbjct: 182 ASFCGCVGVKPTYGRVSRYGMIAYGSSLDQIGPMTR 217
>sp|A6VH97|GATA_METM7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=gatA PE=3
SV=1
Length = 431
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 26 LKKNIKQDFGAFIE--KLQLLPPPQPLPPKAP---HPLTGLSFAVSDLFDIEGYVTGFGH 80
L+K K D AFI+ ++L + L PL G AV +++GY
Sbjct: 10 LEKIEKSDVNAFIDVNSEKVLKEAEELEKNDALKNKPLYGKIVAVKSNINVKGYKISCAS 69
Query: 81 PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMP 140
+ + +TVV L GA +G T +DEFA +G ++ NPAA ++P
Sbjct: 70 KTL--DNYIGTYDATVVKKLRSQGALIVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIP 127
Query: 141 GGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLD 200
GGSSSG+A AVAADL D ++G DT G +R P++ CGI+GF+PSYG VS G+ ++ S D
Sbjct: 128 GGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFD 187
Query: 201 TVGWFARD 208
+G ++
Sbjct: 188 QIGPLTKN 195
>sp|A4FW11|GATA_METM5 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=gatA PE=3
SV=1
Length = 431
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 26 LKKNIKQDFGAFIE--KLQLLPPPQPLPPK---APHPLTGLSFAVSDLFDIEGYVTGFGH 80
L+K K D AFI+ ++L + L PL G AV +++GY
Sbjct: 10 LEKIEKSDVNAFIDVNSEKVLKEAEELEKNDDLKNKPLYGKIVAVKSNINVKGYKISCAS 69
Query: 81 PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMP 140
+ + +TVV L GA +G T +DEFA +G Y NPAA ++P
Sbjct: 70 KTLEKY--VGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPAALDRIP 127
Query: 141 GGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLD 200
GGSSSG+A AVAADL D ++G DT G +R P++ CGI+GF+PSYG VS G+ ++ S D
Sbjct: 128 GGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFD 187
Query: 201 TVGWFARD 208
+G ++
Sbjct: 188 QIGPLTKN 195
>sp|A9A9F2|GATA_METM6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=gatA PE=3
SV=1
Length = 431
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 26 LKKNIKQDFGAFIE--KLQLLPPPQPLPPK---APHPLTGLSFAVSDLFDIEGYVTGFGH 80
L+K K D AFI+ ++L + L PL G AV +++GY
Sbjct: 10 LEKIEKSDVNAFIDVNSEKVLKEAEELEKNDYLKNKPLYGKIVAVKSNINVKGYKISCAS 69
Query: 81 PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMP 140
+ + +TVV L GA +G T +DEFA +G ++ NPAA ++P
Sbjct: 70 KTLEKY--TGTYDATVVKKLRLQGALIVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIP 127
Query: 141 GGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLD 200
GGSSSG+A AVAADL D ++G DT G +R P++ CGI+GF+PSYG VS G+ ++ S D
Sbjct: 128 GGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFD 187
Query: 201 TVGWFARD 208
+G ++
Sbjct: 188 QIGPLTKN 195
>sp|Q6LX43|GATA_METMP Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain S2 / LL) GN=gatA PE=3 SV=1
Length = 431
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 26 LKKNIKQDFGAFIE--KLQLLPPPQPLPPKAP---HPLTGLSFAVSDLFDIEGYVTGFGH 80
L+K K D AFI+ ++L + L PL G AV +++GY
Sbjct: 10 LEKIEKSDVNAFIDVNGEKVLKEAEELEKNDTLKNKPLYGKIVAVKSNINVKGYKISCAS 69
Query: 81 PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMP 140
+ + +TVV L GA +G T +DEFA +G Y NPAA ++P
Sbjct: 70 KTLEKY--VGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPAAMDRIP 127
Query: 141 GGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLD 200
GGSSSG+A AVAADL D ++G DT G +R P++ CGI+GF+PSYG VS G+ ++ S D
Sbjct: 128 GGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFD 187
Query: 201 TVGWFARD 208
+G ++
Sbjct: 188 QIGPLTKN 195
>sp|Q31LC2|GATA_SYNE7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus
elongatus (strain PCC 7942) GN=gatA PE=3 SV=1
Length = 479
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 75/114 (65%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
STV L E GA +GKT +DEFA + N Y T NP +++PGGSS G+A AVAA
Sbjct: 101 STVTQRLAEAGAVAVGKTNLDEFAMGSSTENSAYQTTANPWDLTRVPGGSSGGSAAAVAA 160
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
D +LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G F+R
Sbjct: 161 DECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSR 214
>sp|Q5N0K5|GATA_SYNP6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gatA
PE=3 SV=1
Length = 479
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 75/114 (65%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAA 153
STV L E GA +GKT +DEFA + N Y T NP +++PGGSS G+A AVAA
Sbjct: 101 STVTQRLAEAGAVAVGKTNLDEFAVGSSTENSAYQTTANPWDLTRVPGGSSGGSAAAVAA 160
Query: 154 DLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 207
D +LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G F+R
Sbjct: 161 DECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSR 214
>sp|B8JBQ1|GATA_ANAD2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gatA PE=3
SV=1
Length = 492
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGH---PEWARTHSAASRTSTVVSTLVEGGATCIGKTVVD 114
L G+ AV DLF +G T G W + A TVV L GA +GK +D
Sbjct: 76 LDGVPVAVKDLFVTKGVPTTAGSRILEGWLPPYDA-----TVVERLEAAGAVIVGKLNMD 130
Query: 115 EFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAF 174
EFA + N Y NP S+ PGGSS G+A +VAA V SLG DT G +R P+AF
Sbjct: 131 EFAMGSSNENSAYKPCHNPWDLSRTPGGSSGGSAASVAAGQVHASLGTDTGGSIREPAAF 190
Query: 175 CGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQI 233
CG++G +P+YG VS G++ ++SLD VG AR+ VG L L A PR +
Sbjct: 191 CGVVGVKPTYGRVSRYGVVAFASSLDQVGPLARE------VGDAALVLRTIAGHDPRDM 243
>sp|A5UMN0|GATA_METS3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=gatA PE=3
SV=1
Length = 456
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 20/160 (12%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT---------STVVSTLVEGGATCI 108
L+GL F + ++E Y+ SAAS+T +TV+ ++ +
Sbjct: 66 LSGLVFGIKANINVEDYII-----------SAASKTLDNYFGSYNATVIDKILAQDGIIL 114
Query: 109 GKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGV 168
G T +DEFA + + NPAAP ++PGGSS G+A AVAA++ D +LG DT G +
Sbjct: 115 GITNMDEFAAGSSTETSCFGPTQNPAAPGRIPGGSSGGSAAAVAAEMCDIALGSDTGGSI 174
Query: 169 RVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
R P++ CG++GF+P+YGAVS G++ +S SLD +G + D
Sbjct: 175 RNPASHCGVVGFKPTYGAVSRQGLLDLSMSLDQIGPLSND 214
>sp|Q936X3|ATZE_PSESD Biuret hydrolase OS=Pseudomonas sp. (strain ADP) GN=atzE PE=1 SV=1
Length = 457
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL GL +AV +LFDIEG VT + RT A + +V L GA +G +DEF
Sbjct: 65 PLAGLPYAVKNLFDIEG-VTTLAGSKINRTLPPARADAVLVQRLKAAGAVLLGGLNMDEF 123
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
AY N HY NP ++ GGSS G+ A+AA V SLG DT G +RVP++ CG
Sbjct: 124 AYGFTTENTHYGPTRNPHDTGRIAGGSSGGSGAAIAAGQVPLSLGSDTNGSIRVPASLCG 183
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFA 206
+ G +P++G +S G P S+D +G A
Sbjct: 184 VWGLKPTFGRLSRRGTYPFVHSIDHLGPLA 213
>sp|A6UQF6|GATA_METVS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gatA
PE=3 SV=1
Length = 431
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 190/431 (44%), Gaps = 66/431 (15%)
Query: 26 LKKNIKQDFGAFIE--------KLQLLPPPQPLPPKAPHPLTGLSFAVSDLFDIEGYVTG 77
L+K K D AFI+ + + L + L K+ L G AV ++EGY
Sbjct: 10 LEKIEKSDINAFIDLNGERVLKEAKDLEKNEKLKNKS---LYGKIIAVKSNINVEGYKIS 66
Query: 78 FGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPS 137
+ + +TV+ L GA IG T +DEFA +G +Y NP A
Sbjct: 67 CASKTL--DNYTGTYDATVIKKLRSEGALIIGMTNMDEFASGSSGETSYYGPTKNPKALD 124
Query: 138 QMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPIST 197
++PGGSSSG+A AV+ADL D +LG DT G +R P++ CG++GF+P+YG VS G+ ++
Sbjct: 125 RIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPTYGVVSRQGLCDLAM 184
Query: 198 SLDTVGWFARDPKILRHVGHVLLQLPFA---AQRSPRQIIIADDCFELLKIPADR--VVQ 252
S D +G + + ++ +V+ L + + ++P+ FE +I + VV+
Sbjct: 185 SFDQIGPLTKTAEDSLNLTNVIKGLDLSNTTSLKTPK--------FEKKEIKDYKIGVVR 236
Query: 253 VVIKSTEKLFGRQVLK----HENLG--------EYFDSKVPSLKGFHKTNGELKNVMRLI 300
+ T++ ++ K +LG +Y D +P+ LI
Sbjct: 237 EFMDVTDEKIRNEIEKGIEVFRDLGCEIVDLSYKYIDLALPT--------------YYLI 282
Query: 301 QRYEF-----KNNHNEWIESVKPALDPDISAE--IGEML---EISETVIENCKSIRNEMR 350
EF K + + E ++ A ++ IG+ + E S + R EM+
Sbjct: 283 NYVEFYSATRKYDGRRFGEVIEEACGEEVLRRILIGKHISEQEFSGKYYKKALQARKEMK 342
Query: 351 SAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSI-ASVSGCCQVTVPLG 409
+ L ++V PT P K+G + E Y A+ +L++ ++ G C V G
Sbjct: 343 KEMIGLFNSVDLIVGPTVPKLPHKIGEELSPMEMY---AYDVLTVLTNICGICSGVVGCG 399
Query: 410 YYDKCPTSVSF 420
+ P +
Sbjct: 400 NINGIPVGLQI 410
>sp|Q75D84|GATA_ASHGO Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=HER2 PE=3 SV=2
Length = 463
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Query: 94 STVVSTLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQ--MPGGSSSGAAVAV 151
+TVV L E GA GKT +DEF G + + NPA P + + GGSSSG+A AV
Sbjct: 73 ATVVELLDEAGAVTAGKTNMDEFGMGSGGIHSFFGPTLNPAFPERPTVAGGSSSGSAAAV 132
Query: 152 AADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKI 211
AA +VDF+LG DT G VR+P+A+ +GF+PSYG VS G+I + SLDTVG ARD +
Sbjct: 133 AAGVVDFALGTDTGGSVRMPAAYTSTVGFKPSYGRVSRHGVIAYAQSLDTVGIGARDVGL 192
Query: 212 LRHVGHVL 219
+R V VL
Sbjct: 193 VRRVFEVL 200
>sp|Q2GEE7|GATA_NEOSM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neorickettsia
sennetsu (strain Miyayama) GN=gatA PE=3 SV=1
Length = 482
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 58 LTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEFA 117
LTG+ + D++ +G T A + + STV S L++ GA +GK +DEFA
Sbjct: 72 LTGIPCVIKDMYCTKGVRTTAA--SRALRNFVPTYESTVTSKLIDAGAVMLGKANMDEFA 129
Query: 118 YSINGTNKHYDTPTNPAAPSQ----MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSA 173
+ T+ + NP + +PGGSS G+A AVA FSLG DT G VR P++
Sbjct: 130 MGSSNTSSFFGPVKNPLKGKKGVDLVPGGSSGGSAAAVADYYSPFSLGSDTGGSVRQPAS 189
Query: 174 FCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
FCG++G RP+YG S G+IP++ SLD G +R+
Sbjct: 190 FCGLVGLRPTYGRCSRWGMIPLANSLDQAGILSRN 224
>sp|B9LER8|GATA_CHLSY Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus
aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)
GN=gatA PE=3 SV=1
Length = 487
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ D+ +G T G A + +TV+ LV GA +GK DEF
Sbjct: 71 PLDGIPIAIKDVICTDGVPTTAGSRILAGFRPPYN--ATVIERLVAAGAVLVGKLNCDEF 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N Y TNP P+++PGGSS G+A AVAA V +LG DT G +R P+A CG
Sbjct: 129 AMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVG---WFARDPKILRHV--GH 217
I G +P+YG VS G+I +SLD +G W D +L +V GH
Sbjct: 189 ISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGH 234
>sp|A9WCD8|GATA_CHLAA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=gatA PE=3 SV=1
Length = 487
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
PL G+ A+ D+ +G T G A + +TV+ LV GA +GK DEF
Sbjct: 71 PLDGIPIAIKDVICTDGVPTTAGSRILAGFRPPYN--ATVIERLVAAGAVLVGKLNCDEF 128
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + N Y TNP P+++PGGSS G+A AVAA V +LG DT G +R P+A CG
Sbjct: 129 AMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCG 188
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVG---WFARDPKILRHV--GH 217
I G +P+YG VS G+I +SLD +G W D +L +V GH
Sbjct: 189 ISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGH 234
>sp|B1HTW9|GATA_LYSSC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lysinibacillus
sphaericus (strain C3-41) GN=gatA PE=3 SV=1
Length = 487
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 90/168 (53%), Gaps = 20/168 (11%)
Query: 50 LPPKAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRT---------STVVSTL 100
+P + PL GL V D EG T + AS+ +TVV+ L
Sbjct: 61 VPFEERGPLFGLPIGVKDNIVTEGLET-----------TCASKILEGFMPIYDATVVNKL 109
Query: 101 VEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSL 160
E G +GK +DEFA + N +Y T NP + +PGGSS +A +VAA V FSL
Sbjct: 110 REAGMITVGKLNMDEFAMGSSNENSYYKTTKNPWNLNHVPGGSSGASAASVAAGEVPFSL 169
Query: 161 GIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 208
G DT G +R P+A+CG++G +P+YG VS G++ ++SLD +G R+
Sbjct: 170 GSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRN 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217,419,269
Number of Sequences: 539616
Number of extensions: 9346136
Number of successful extensions: 36572
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 34748
Number of HSP's gapped (non-prelim): 1498
length of query: 580
length of database: 191,569,459
effective HSP length: 123
effective length of query: 457
effective length of database: 125,196,691
effective search space: 57214887787
effective search space used: 57214887787
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)