BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008026
(580 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 126/214 (58%), Gaps = 4/214 (1%)
Query: 367 VPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKR 426
VP+ E ++ + + S++ L+ ++NFS +NILGRGGFG VYKG L DGT +AVKR
Sbjct: 12 VPAEEDPEVHLGQLKR--FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKR 69
Query: 427 MEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFN 486
++ G G +F++E+ +++ HR+L+ L G C+ E+LLV+ YM G+++
Sbjct: 70 LKEERXQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA-SCLR 127
Query: 487 WAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546
E PL+W +R IAL ARG+ YLH IHRD+K +NILL ++ A V DFG
Sbjct: 128 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 187
Query: 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
L +L + + GT G++APEY SS
Sbjct: 188 LAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSS 221
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 123/214 (57%), Gaps = 4/214 (1%)
Query: 367 VPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKR 426
VP+ E ++ + + S++ L+ ++NF +NILGRGGFG VYKG L DG +AVKR
Sbjct: 4 VPAEEDPEVHLGQLKR--FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKR 61
Query: 427 MEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFN 486
++ G G +F++E+ +++ HR+L+ L G C+ E+LLV+ YM G+++
Sbjct: 62 LKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA-SCLR 119
Query: 487 WAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546
E PL+W +R IAL ARG+ YLH IHRD+K +NILL ++ A V DFG
Sbjct: 120 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
L +L + + G G++APEY SS
Sbjct: 180 LAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSS 213
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 117/197 (59%), Gaps = 15/197 (7%)
Query: 385 ISIQVLRNVTNNFSEE------NILGRGGFGTVYKGELHDGTKIAVKRMEAGV-ISGKGL 437
S L+NVTNNF E N +G GGFG VYKG +++ T +AVK++ A V I+ + L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 438 -TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLE 496
+F EI V+ K +H +LV LLG DG++ LV+ YMP G+L + +G PL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLS 131
Query: 497 WNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-GK 555
W+ R IA A G+ +LH H IHRD+K +NILL + AK++DFGL R + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 556 GSIETRIAGTFGYLAPE 572
+ +RI GT Y+APE
Sbjct: 189 TVMXSRIVGTTAYMAPE 205
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 15/197 (7%)
Query: 385 ISIQVLRNVTNNFSEE------NILGRGGFGTVYKGELHDGTKIAVKRMEAGV-ISGKGL 437
S L+NVTNNF E N +G GGFG VYKG +++ T +AVK++ A V I+ + L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 438 -TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLE 496
+F EI V+ K +H +LV LLG DG++ LV+ YMP G+L + +G PL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLS 131
Query: 497 WNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-GK 555
W+ R IA A G+ +LH H IHRD+K +NILL + AK++DFGL R + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 556 GSIETRIAGTFGYLAPE 572
+ RI GT Y+APE
Sbjct: 189 TVMXXRIVGTTAYMAPE 205
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 15/197 (7%)
Query: 385 ISIQVLRNVTNNFSEE------NILGRGGFGTVYKGELHDGTKIAVKRMEAGV-ISGKGL 437
S L+NVTNNF E N +G GGFG VYKG +++ T +AVK++ A V I+ + L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 438 -TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLE 496
+F EI V+ K +H +LV LLG DG++ LV+ YMP G+L + +G PL
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLS 125
Query: 497 WNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-GK 555
W+ R IA A G+ +LH H IHRD+K +NILL + AK++DFGL R + + +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 556 GSIETRIAGTFGYLAPE 572
+ RI GT Y+APE
Sbjct: 183 XVMXXRIVGTTAYMAPE 199
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 113/185 (61%), Gaps = 7/185 (3%)
Query: 390 LRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
L TNNF + ++G G FG VYKG L DG K+A+KR S +G+ EF++EI L+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSF 91
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
RH HLV+L+G C + NE +L+++YM G L RH++ ++ + W +RL I + AR
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAAR 150
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-GKGSIETRIAGTFGY 568
G+ YLH ++ IHRD+K NILL ++ K+ DFG+ + E G+ + + GT GY
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 569 LAPEY 573
+ PEY
Sbjct: 208 IDPEY 212
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 112/185 (60%), Gaps = 7/185 (3%)
Query: 390 LRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
L TNNF + ++G G FG VYKG L DG K+A+KR S +G+ EF++EI L+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSF 91
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
RH HLV+L+G C + NE +L+++YM G L RH++ ++ + W +RL I + AR
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAAR 150
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-GKGSIETRIAGTFGY 568
G+ YLH ++ IHRD+K NILL ++ K+ DFG+ + E + + + GT GY
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 569 LAPEY 573
+ PEY
Sbjct: 208 IDPEY 212
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 112/197 (56%), Gaps = 15/197 (7%)
Query: 385 ISIQVLRNVTNNFSEE------NILGRGGFGTVYKGELHDGTKIAVKRMEAGV-ISGKGL 437
S L+NVTNNF E N G GGFG VYKG +++ T +AVK++ A V I+ + L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 438 -TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLE 496
+F EI V K +H +LV LLG DG++ LV+ Y P G+L + +G PL
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLS 122
Query: 497 WNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-GK 555
W+ R IA A G+ +LH H IHRD+K +NILL + AK++DFGL R + + +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 556 GSIETRIAGTFGYLAPE 572
+RI GT Y APE
Sbjct: 180 XVXXSRIVGTTAYXAPE 196
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTV++ E H G+ +AVK + + + EF E+A++ ++RH ++V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+V EY+ +G+L R + + L+ RRL++A DVA+G+ YLH +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPI 160
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS---IETRIAGTFGYLAPE 572
+HRDLK N+L+ KV DFGL RL K S AGT ++APE
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL----KASXFLXSKXAAGTPEWMAPE 209
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTV++ E H G+ +AVK + + + EF E+A++ ++RH ++V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+V EY+ +G+L R + + L+ RRL++A DVA+G+ YLH +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPI 160
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HR+LK N+L+ KV DFGL RL S ++ AGT ++APE
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS-AAGTPEWMAPE 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + +E E + + IA ARG++YLH +S
Sbjct: 78 T--KPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---KSI 129
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D K+ DFGL + GS + +++G+ ++APE
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + +E E + + IA ARG++YLH +S
Sbjct: 90 T--KPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---KSI 141
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D K+ DFGL GS + +++G+ ++APE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V ++ +L H+ A E E + + IA ARG++YLH +S
Sbjct: 90 T-APQLAIVTQWCEGSSLYHHLH--ASE--TKFEMKKLIDIARQTARGMDYLHA---KSI 141
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D K+ DFGL GS + +++G+ ++APE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 79 --TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 130
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL + GS + +++G+ ++APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 76 --TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 127
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL + GS + +++G+ ++APE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 79 --TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 130
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL + GS + +++G+ ++APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 74 --TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 125
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL + GS + +++G+ ++APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V ++ +L H+ + E + + IA A+G++YLH +S
Sbjct: 74 -TAPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA---KSI 125
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL + GS + +++G+ ++APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 101 --TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 152
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL + GS + +++G+ ++APE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 102 T--KPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 153
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL + GS + +++G+ ++APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 401 NILGRGGFGTVYKGEL--HDGT--KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
ILG G FG+V +G L DGT K+AVK M+ S + + EF SE A + H +++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 457 ALLGHCLDGNEK-----LLVFEYMPQGTLSRHI-FNWAEEGLKPLEWNRRLTIALDVARG 510
LLG C++ + + +++ +M G L ++ ++ E G K + L +D+A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIA 563
+EYL ++++F+HRDL N +L DDM VADFGL + G + RIA
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 74 --TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 125
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL GS + +++G+ ++APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 94 --TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 145
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL GS + +++G+ ++APE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK + + + L FK+E+ VL K RH +++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+L + +G+ H + E E + + IA A+G++YLH +S
Sbjct: 102 T--KPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSI 153
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPE 572
IHRDLK +NI L +D+ K+ DFGL GS + +++G+ ++APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 22/192 (11%)
Query: 395 NNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGK-----GLTEFKSEIAVLT 448
N E +G+GGFG V+KG L D + +A+K + G G+ EF+ E+ +++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508
+ H ++V L G L N +V E++P G L + + A P++W+ +L + LD+A
Sbjct: 79 NLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIA 132
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGD-----DMRAKVADFGLVRLAPEGKGSIETRIA 563
G+EY+ + +HRDL+ NI L + AKVADFGL + + +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG----LL 187
Query: 564 GTFGYLAPEYAG 575
G F ++APE G
Sbjct: 188 GNFQWMAPETIG 199
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 22/192 (11%)
Query: 395 NNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGK-----GLTEFKSEIAVLT 448
N E +G+GGFG V+KG L D + +A+K + G G+ EF+ E+ +++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508
+ H ++V L G L N +V E++P G L + + A P++W+ +L + LD+A
Sbjct: 79 NLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIA 132
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGD-----DMRAKVADFGLVRLAPEGKGSIETRIA 563
G+EY+ + +HRDL+ NI L + AKVADF L + + +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG----LL 187
Query: 564 GTFGYLAPEYAG 575
G F ++APE G
Sbjct: 188 GNFQWMAPETIG 199
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 22/192 (11%)
Query: 395 NNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGK-----GLTEFKSEIAVLT 448
N E +G+GGFG V+KG L D + +A+K + G G+ EF+ E+ +++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508
+ H ++V L G L N +V E++P G L + + A P++W+ +L + LD+A
Sbjct: 79 NLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIA 132
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGD-----DMRAKVADFGLVRLAPEGKGSIETRIA 563
G+EY+ + +HRDL+ NI L + AKVADFG + + +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG----LL 187
Query: 564 GTFGYLAPEYAG 575
G F ++APE G
Sbjct: 188 GNFQWMAPETIG 199
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG V+ E H D +AVK ++ S + +F+ E +LT ++H+H+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR--QDFQREAELLTMLQHQHIV 106
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL----------KPLEWNRRLTIALD 506
G C +G L+VFEYM G L+R + + + PL + L +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA G+ YL GL F+HRDL N L+G + K+ DFG+ R
Sbjct: 167 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FG V+ G + K+A+K + G +S + +F E V+ K+ H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
L+ LVFE+M G LS ++ + GL E L + LDV G+ YL S
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAE--TLLGMCLDVCEGMAYLE---EASV 124
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRDL N L+G++ KV+DFG+ R + + + T + +PE
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG V+ E H D +AVK ++ S + +F+ E +LT ++H+H+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR--QDFQREAELLTMLQHQHIV 83
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL----------KPLEWNRRLTIALD 506
G C +G L+VFEYM G L+R + + + PL + L +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA G+ YL GL F+HRDL N L+G + K+ DFG+ R
Sbjct: 144 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG V+ E H D +AVK ++ S + +F+ E +LT ++H+H+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR--QDFQREAELLTMLQHQHIV 77
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL----------KPLEWNRRLTIALD 506
G C +G L+VFEYM G L+R + + + PL + L +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA G+ YL GL F+HRDL N L+G + K+ DFG+ R
Sbjct: 138 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 19/161 (11%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG V+ E + D +AVK ++ S +F E +LT ++H H+V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIV 78
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFN------WAEEGLKPLEW--NRRLTIALDVA 508
G C++G+ ++VFEYM G L++ + EG P E ++ L IA +A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
G+ Y LA Q F+HRDL N L+G+++ K+ DFG+ R
Sbjct: 139 AGMVY---LASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 153
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 202
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTELCGTLDYLPPE 176
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 144
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 145 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 193
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKV- 450
N+ ++++G G FG V K + DG ++ A+KRM+ S +F E+ VL K+
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLG 83
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHI-----FNWAEEGLKPLEWNR 499
H +++ LLG C L EY P G L SR + F A L +
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
L A DVARG++YL + + FIHRDL NIL+G++ AK+ADFGL R
Sbjct: 144 LLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 128
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T ++GT YL PE
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSRRTTLSGTLDYLPPE 177
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 132
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 181
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKV- 450
N+ ++++G G FG V K + DG ++ A+KRM+ S +F E+ VL K+
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLG 73
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHI-----FNWAEEGLKPLEWNR 499
H +++ LLG C L EY P G L SR + F A L +
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
L A DVARG++YL + + FIHRDL NIL+G++ AK+ADFGL R
Sbjct: 134 LLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 130
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 179
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 176
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FG V+ G + K+A+K + G +S + +F E V+ K+ H LV L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
L+ LVFE+M G LS ++ + GL E L + LDV G+ YL
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAE--TLLGMCLDVCEGMAYLE---EACV 127
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRDL N L+G++ KV+DFG+ R + + + T + +PE
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 177
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FG V+ G + K+A+K + G +S + +F E V+ K+ H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
L+ LVFE+M G LS ++ + GL E L + LDV G+ YL
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAE--TLLGMCLDVCEGMAYLE---EACV 124
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRDL N L+G++ KV+DFG+ R + + + T + +PE
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 128
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPE 177
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 132
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 181
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FG V+ G + K+A+K + G +S + +F E V+ K+ H LV L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
L+ LVFE+M G LS ++ + GL E L + LDV G+ YL
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAE--TLLGMCLDVCEGMAYLE---EACV 122
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRDL N L+G++ KV+DFG+ R + + + T + +PE
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPE 176
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 396 NFSEENILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGKGLTE-FKSEIAVLTKVRHR 453
+F N+LG+G F VY+ E +H G ++A+K ++ + G+ + ++E+ + +++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++ L + D N LV E G ++R++ N +KP N + G+ Y
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLY 127
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR--IAGTFGYLAP 571
LH +HRDL SN+LL +M K+ADFG LA + K E + GT Y++P
Sbjct: 128 LHS---HGILHRDLTLSNLLLTRNMNIKIADFG---LATQLKMPHEKHYTLCGTPNYISP 181
Query: 572 EYA 574
E A
Sbjct: 182 EIA 184
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPE 176
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 132
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPE 181
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 82 VSEEPIYIVIEYMSKGSLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 187
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 364 THTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIA 423
T P+S+P Q L I + LR E LG+G FG V+ G + T++A
Sbjct: 161 TTVCPTSKP-QTQGLAKDAWEIPRESLRL-------EVKLGQGCFGEVWMGTWNGTTRVA 212
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
+K ++ G +S + F E V+ K+RH LV L + +V EYM +G+L
Sbjct: 213 IKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD- 267
Query: 484 IFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 543
F E G K L + + +A +A G+ Y+ + +++HRDL+ +NIL+G+++ KVA
Sbjct: 268 -FLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 322
Query: 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
DFGL RL + + + + APE A
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTXLCGTLDYLPPE 176
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 364 THTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIA 423
T P+S+P Q L I + LR E LG+G FG V+ G + T++A
Sbjct: 161 TTVCPTSKP-QTQGLAKDAWEIPRESLRL-------EVKLGQGCFGEVWMGTWNGTTRVA 212
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
+K ++ G +S + F E V+ K+RH LV L + +V EYM +G+L
Sbjct: 213 IKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD- 267
Query: 484 IFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 543
F E G K L + + +A +A G+ Y+ + +++HRDL+ +NIL+G+++ KVA
Sbjct: 268 -FLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 322
Query: 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
DFGL RL + + + + APE A
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 364 THTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIA 423
T P+S+P Q L I + LR E LG+G FG V+ G + T++A
Sbjct: 244 TTVCPTSKP-QTQGLAKDAWEIPRESLRL-------EVKLGQGCFGEVWMGTWNGTTRVA 295
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
+K ++ G +S + F E V+ K+RH LV L + +V EYM +G+L
Sbjct: 296 IKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD- 350
Query: 484 IFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 543
F E G K L + + +A +A G+ Y+ + +++HRDL+ +NIL+G+++ KVA
Sbjct: 351 -FLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 405
Query: 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
DFGL RL + + + + APE A
Sbjct: 406 DFGLARLIEDNEYTARQGAKFPIKWTAPEAA 436
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 130
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 179
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 126
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 175
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 131
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 180
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALSYCHS---K 131
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG + K+ADFG AP + T + GT YL PE
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE 180
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 82 VSEEPIYIVIEYMSKGSLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKIRHEKLVQLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 82 VSEEPIYIVTEYMSKGSLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 12/173 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YA 70
Query: 463 LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
+ E + +V EYM +G+L F E G K L + + +A +A G+ Y+ + +
Sbjct: 71 VVSEEPIXIVTEYMSKGSLLD--FLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---N 124
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
++HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 177
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FG V+ G + K+A+K ++ G +S +F E V+ K+ H LV L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED---DFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
L+ LVFE+M G LS ++ + GL E L + LDV G+ YL
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAE--TLLGMCLDVCEGMAYLE---EACV 144
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRDL N L+G++ KV+DFG+ R + + + T + +PE
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 194
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 74
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 75 VSEEPIYIVTEYMSKGSLLD--FLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NY 128
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 180
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 82 VSEEPIYIVMEYMSKGCLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 124
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 173
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 364 THTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIA 423
T P+S+P Q L I + LR E LG+G FG V+ G + T++A
Sbjct: 161 TTVCPTSKP-QTQGLAKDAWEIPRESLRL-------EVKLGQGCFGEVWMGTWNGTTRVA 212
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
+K ++ G +S + F E V+ K+RH LV L + +V EYM +G+L
Sbjct: 213 IKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLD- 267
Query: 484 IFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 543
F E G K L + + +A +A G+ Y+ + +++HRDL+ +NIL+G+++ KVA
Sbjct: 268 -FLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 322
Query: 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
DFGL RL + + + + APE A
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 130
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP + + + GT YL PE
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA---LCGTLDYLPPE 179
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 153
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S + GT YL PE
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGTLDYLPPE 202
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKV- 450
N+ ++++G G FG V K + DG ++ A+KRM+ S +F E+ VL K+
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLG 80
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHI-----FNWAEEGLKPLEWNR 499
H +++ LLG C L EY P G L SR + F A L +
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
L A DVARG++YL + + FIHR+L NIL+G++ AK+ADFGL R
Sbjct: 141 LLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 82 VSEEPIYIVCEYMSKGSLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 128
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP + + GT YL PE
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPE 177
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 129
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+A+FG AP S T + GT YL PE
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTLDYLPPE 178
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 72
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 73 VSEEPIYIVTEYMSKGSLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 126
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 178
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 129
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S + GT YL PE
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDYLPPE 178
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 18/168 (10%)
Query: 395 NNFSEENILGRGGFGTVYKGEL--HDGT--KIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
F+ +LG+G FG+V + +L DG+ K+AVK ++A +I+ + EF E A + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 451 RHRHLVALLGHCLDGNEK------LLVFEYMPQGTLSRHIFNWAEE-GLKP--LEWNRRL 501
H H+ L+G L K +++ +M G L H F A G P L +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL--HAFLLASRIGENPFNLPLQTLV 140
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+D+A G+EYL + ++FIHRDL N +L +DM VADFGL R
Sbjct: 141 RFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 82 VSEEPIYIVTEYMSKGSLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 70
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 71 VSEEPIYIVTEYMSKGSLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 124
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 176
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P+G + + + + L + R T ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELANALSYCHS---K 132
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S T + GT YL PE
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE 181
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FGTVYKG+ H +AVK ++ + + F++E+AVL K RH +++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
N + V ++ +L +H+ +E + + + IA A+G++YLH ++
Sbjct: 102 TKDNLAI-VTQWCEGSSLYKHLH--VQE--TKFQMFQLIDIARQTAQGMDYLHA---KNI 153
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIET-RIAGTFGYLAPE 572
IHRD+K +NI L + + K+ DFGL + GS + + G+ ++APE
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG V+ E + D +AVK ++ ++ + +F+ E +LT ++H H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR--KDFQREAELLTNLQHEHIV 80
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL-----KP------LEWNRRLTIAL 505
G C DG+ ++VFEYM G L++ + + + +P L ++ L IA
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+A G+ Y LA Q F+HRDL N L+G ++ K+ DFG+ R
Sbjct: 141 QIASGMVY---LASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 85
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 86 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 139
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-AINYGT 195
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 82 VSEEPIYIVTEYMSKGCLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 130
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+A+FG AP S T + GT YL PE
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTLDYLPPE 179
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 82
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 83 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 136
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-AINYGT 192
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 84
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 85 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 138
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-AINYGT 194
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY + I A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP + + + GT YL PE
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA---LCGTLDYLPPE 176
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 78
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 79 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 132
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-AINYGT 188
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP + + + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA---LCGTLDYLPPE 176
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 78
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L + E K L + + ++ +A G+ Y+ + ++
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKG---ETGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAA 184
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 76
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 77 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-AINYGT 186
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 76
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 77 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-AINYGT 186
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 130
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S + GT YL PE
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDYLPPE 179
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 77
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 78 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 131
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-AINYGT 187
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 82
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 83 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 136
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-AINYGT 192
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALSYCHS---K 131
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG + K+ADFG AP + + GT YL PE
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPE 180
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDYLPPE 176
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 71
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 72 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 125
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-AINYGT 181
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 82 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-AINYGT 191
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 86
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 87 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 140
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-AINYGT 196
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 78
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + ++ +A G+ Y+ + ++
Sbjct: 79 VSEEPIYIVTEYMNKGSLLD--FLKGETG-KYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL+ +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 184
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG+G FG V+ G + T++A+K ++ G +S + F E V+ K+RH LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA-V 81
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ +V EYM +G+L F E G K L + + +A +A G+ Y+ + ++
Sbjct: 82 VSEEPIYIVTEYMSKGSLLD--FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRDL +NIL+G+++ KVADFGL RL + + + + APE A
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 76
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 77 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-AINYGT 186
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P GT+ R + + L + R T ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---K 130
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S + GT YL PE
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGTLDYLPPE 179
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 364 THTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIA 423
T+ P+S+P Q L I + LR E LG+G FG V+ G + T++A
Sbjct: 162 TNVCPTSKP-QTQGLAKDAWEIPRESLRL-------EVKLGQGCFGEVWMGTWNGTTRVA 213
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
+K ++ G +S + F E V+ K+RH LV L + +V EYM +G+L
Sbjct: 214 IKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD- 268
Query: 484 IFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 543
F E G K L + + +A +A G+ Y+ + +++HRDL+ +NIL+G+++ KVA
Sbjct: 269 -FLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 323
Query: 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
DFGL RL + + + + APE A
Sbjct: 324 DFGLGRLIEDNEYTARQGAKFPIKWTAPEAA 354
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G FG V+ G + K+A+K + G +S + +F E V+ K+ H LV L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
L+ LV E+M G LS ++ + GL E L + LDV G+ YL
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRT--QRGLFAAE--TLLGMCLDVCEGMAYLE---EACV 125
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRDL N L+G++ KV+DFG+ R + + + T + +PE
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 23/190 (12%)
Query: 396 NFSE---ENILGRGGFGTVYKGELHDGTKIAVK--RMEAGVISGKGLTEFKSEIAVLTKV 450
+F+E E I+G GGFG VY+ G ++AVK R + + + + E + +
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
+H +++AL G CL LV E+ G L+R + + + + P + + A+ +ARG
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPP---DILVNWAVQIARG 117
Query: 511 VEYLHGLAHQSFIHRDLKPSNILL------GD--DMRAKVADFGLVRLAPEGKGSIETRI 562
+ YLH A IHRDLK SNIL+ GD + K+ DFGL R E + +
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSA 174
Query: 563 AGTFGYLAPE 572
AG + ++APE
Sbjct: 175 AGAYAWMAPE 184
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVALLG 460
LG+G FG VY E +A+K + + G+ + + E+ + + +RH +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ D L+ EY P+G + + + + L + R T ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELANALSYCHS---K 132
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KP N+LLG K+ADFG AP S + GT YL PE
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLXGTLDYLPPE 181
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 12/150 (8%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G+G FG V G+ + G K+AVK ++ + F +E +V+T++RH +LV LLG
Sbjct: 20 IGKGEFGDVMLGD-YRGNKVAVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 463 LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
++ L +V EYM +G+L ++ + G L + L +LDV +EYL G +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEG---NN 128
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLA 551
F+HRDL N+L+ +D AKV+DFGL + A
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEA 158
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 72
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 73 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 126
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHR+L+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-AINYGT 182
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 12/150 (8%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G+G FG V G+ + G K+AVK ++ + F +E +V+T++RH +LV LLG
Sbjct: 29 IGKGEFGDVMLGD-YRGNKVAVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 463 LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
++ L +V EYM +G+L ++ + G L + L +LDV +EYL G +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEG---NN 137
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLA 551
F+HRDL N+L+ +D AKV+DFGL + A
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 430 GVISGKG-LTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK--LLVFEYMPQGTLSRHIFN 486
G I +G + + EIA+L K+ H ++V L+ D NE +VFE + QG +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME---- 127
Query: 487 WAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546
LKPL ++ D+ +G+EYLH +Q IHRD+KPSN+L+G+D K+ADFG
Sbjct: 128 --VPTLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 547 LVRLAPEGKGSIETRIAGTFGYLAPE 572
V +G ++ + GT ++APE
Sbjct: 183 -VSNEFKGSDALLSNTVGTPAFMAPE 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 12/150 (8%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G+G FG V G+ + G K+AVK ++ + F +E +V+T++RH +LV LLG
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 463 LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
++ L +V EYM +G+L ++ + G L + L +LDV +EYL G +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEG---NN 122
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLA 551
F+HRDL N+L+ +D AKV+DFGL + A
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 10/176 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G ++ TK+AVK ++ G +S + E E ++ ++H LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAVV 77
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ EYM +G+L F ++EG K L + + + +A G+ Y+ +++
Sbjct: 78 TREEPIYIITEYMAKGSLLD--FLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNY 131
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578
IHRDL+ +N+L+ + + K+ADFGL R+ + + + + APE A NFG
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-AINFG 186
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 12/173 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G + TK+A+K ++ G +S + E E ++ K++H LV L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLE---EAQIMKKLKHDKLVQLYA-V 72
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGL-KPLEWNRRLTIALDVARGVEYLHGLAHQS 521
+ +V EYM +G+L ++ ++G + L+ + +A VA G+ Y+ + +
Sbjct: 73 VSEEPIYIVTEYMNKGSL----LDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---N 125
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+IHRDL+ +NIL+G+ + K+ADFGL RL + + + + APE A
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 178
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 12/150 (8%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G+G FG V G+ + G K+AVK ++ + F +E +V+T++RH +LV LLG
Sbjct: 201 IGKGEFGDVMLGD-YRGNKVAVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 463 LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
++ L +V EYM +G+L ++ + G L + L +LDV +EYL G +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEG---NN 309
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLA 551
F+HRDL N+L+ +D AKV+DFGL + A
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ AE ++ + L + +G+EYL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER----IDHIKLLQYTSQICKGMEYL- 133
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 190
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G G V+ G + TK+AVK ++ G +S F +E ++ +++H+ LV L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 76
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+ ++ EYM G+L F G+K L N+ L +A +A G+ ++ +++
Sbjct: 77 VTQEPIYIITEYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
IHRDL+ +NIL+ D + K+ADFGL RL + + + + APE A N+G+
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE-AINYGT 186
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 10/176 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V+ G ++ TK+AVK ++ G +S + E E ++ ++H LV L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAVV 76
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ E+M +G+L F ++EG K L + + + +A G+ Y+ +++
Sbjct: 77 TKEEPIYIITEFMAKGSLLD--FLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNY 130
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578
IHRDL+ +N+L+ + + K+ADFGL R+ + + + + APE A NFG
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-AINFG 185
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 86/180 (47%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTV---YKGELHDGT--KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +DGT +AVK ++A + + +K EI +L + H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADC-GPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C D EK LV EY+P G+L R GL L L A + G+ YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLAQL-----LLFAQQICEGMAYLH 134
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TFGYLAPE 572
Q +IHR+L N+LL +D K+ DFGL + PEG R G F Y APE
Sbjct: 135 A---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 190
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 86/180 (47%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTV---YKGELHDGT--KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +DGT +AVK ++A + + +K EI +L + H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADC-GPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C D EK LV EY+P G+L R GL L L A + G+ YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLAQL-----LLFAQQICEGMAYLH 134
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TFGYLAPE 572
Q +IHR+L N+LL +D K+ DFGL + PEG R G F Y APE
Sbjct: 135 S---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 190
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 130
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 187
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 29/180 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGE------LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NN +G G FG V++ T +AVK ++ S +F+ E A++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMA 105
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE------------------ 490
+ + ++V LLG C G L+FEYM G L+ + + +
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 491 -GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
G PL +L IA VA G+ YL + + F+HRDL N L+G++M K+ADFGL R
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 133
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 190
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 106
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 161
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 73
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 128
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 185
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 93
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 148
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 205
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 79
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 134
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 135 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 191
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 80
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 135
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 136 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 192
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 74
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 129
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 186
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 130
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 187
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 93
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 148
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 130
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APE 187
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
N F + +LG+GGFG V ++ K+ K + + KG +E +L KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
R +V+L + LV M G L HI++ + G R + A ++ G+E
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE---ARAVFYAAEICCGLE 300
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
LH + ++RDLKP NILL D +++D GL PEG+ +I+ R+ GT GY+APE
Sbjct: 301 DLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGRV-GTVGYMAPE 355
Query: 573 YAGN 576
N
Sbjct: 356 VVKN 359
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 82
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 137
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 138 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 194
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 81
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 136
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 137 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 193
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
N F + +LG+GGFG V ++ K+ K + + KG +E +L KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
R +V+L + LV M G L HI++ + G R + A ++ G+E
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE---ARAVFYAAEICCGLE 300
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
LH + ++RDLKP NILL D +++D GL PEG+ +I+ R+ GT GY+APE
Sbjct: 301 DLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGRV-GTVGYMAPE 355
Query: 573 YAGN 576
N
Sbjct: 356 VVKN 359
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 403 LGRGGFGTV---YKGELHDGT--KIAVKRMEAGVISGKGLTE-FKSEIAVLTKVRHRHLV 456
LG G FG V +DGT +AVK ++ G G L ++ EI +L + H H+V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIV 74
Query: 457 ALLGHCLDGNEK--LLVFEYMPQGTLS----RHIFNWAEEGLKPLEWNRRLTIALDVARG 510
G C D EK LV EY+P G+L RH GL L L A + G
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV-----GLAQL-----LLFAQQICEG 124
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TFG 567
+ YLH Q +IHR L N+LL +D K+ DFGL + PEG R G F
Sbjct: 125 MAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 181
Query: 568 YLAPE 572
Y APE
Sbjct: 182 Y-APE 185
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 15/182 (8%)
Query: 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
E LG G FG V+ + TK+AVK M+ G +S + F +E V+ ++H LV L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDKLVKL- 75
Query: 460 GHCLDGNEKLLVF-EYMPQGTLSRHIFNWAEEGLK-PLEWNRRLTIALDVARGVEYLHGL 517
H + E + + E+M +G+L F ++EG K PL + + + +A G+ ++
Sbjct: 76 -HAVVTKEPIYIITEFMAKGSLLD--FLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE-- 128
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577
+++IHRDL+ +NIL+ + K+ADFGL R+ + + + + APE A NF
Sbjct: 129 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-AINF 186
Query: 578 GS 579
GS
Sbjct: 187 GS 188
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 403 LGRGGFGTV---YKGELHDGT--KIAVKRMEAGVISGKGLTE-FKSEIAVLTKVRHRHLV 456
LG G FG V +DGT +AVK ++ G G L ++ EI +L + H H+V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIV 73
Query: 457 ALLGHCLDGNEK--LLVFEYMPQGTLS----RHIFNWAEEGLKPLEWNRRLTIALDVARG 510
G C D EK LV EY+P G+L RH GL L L A + G
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV-----GLAQL-----LLFAQQICEG 123
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TFG 567
+ YLH Q +IHR L N+LL +D K+ DFGL + PEG R G F
Sbjct: 124 MAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 180
Query: 568 YLAPE 572
Y APE
Sbjct: 181 Y-APE 184
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
E ++GRG FG V K + +A+K++E S F E+ L++V H ++V L
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 460 GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWN---RRLTIALDVARGVEYLHG 516
G CL N LV EY G+L + G +PL + ++ L ++GV YLH
Sbjct: 69 GACL--NPVCLVMEYAEGGSLYNVL-----HGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 517 LAHQSFIHRDLKPSNILL-GDDMRAKVADFGLVRLAPEGKGSIETRIA---GTFGYLAPE 572
+ ++ IHRDLKP N+LL K+ DFG I+T + G+ ++APE
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-------CDIQTHMTNNKGSAAWMAPE 174
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY+G D T++AVK + S + EF +E +V+ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGV 511
LLG G L+V E M G L ++ + E G P + +A ++A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ + F+HRDL N ++ D K+ DFG+ R E GKG + R
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR--- 197
Query: 565 TFGYLAPE 572
++APE
Sbjct: 198 ---WMAPE 202
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY+G D T++AVK + S + EF +E +V+ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGV 511
LLG G L+V E M G L ++ + E G P + +A ++A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ + F+HRDL N ++ D K+ DFG+ R E GKG + R
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR--- 197
Query: 565 TFGYLAPE 572
++APE
Sbjct: 198 ---WMAPE 202
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
C +V EYMP G L ++ E + + L +A ++ +EYL ++
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYLE---KKN 150
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
FIHRDL N L+G++ KVADFGL RL G T AG + APE
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE 201
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
E ++GRG FG V K + +A+K++E S F E+ L++V H ++V L
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 460 GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWN---RRLTIALDVARGVEYLHG 516
G CL N LV EY G+L + G +PL + ++ L ++GV YLH
Sbjct: 68 GACL--NPVCLVMEYAEGGSLYNVL-----HGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 517 LAHQSFIHRDLKPSNILL-GDDMRAKVADFGLVRLAPEGKGSIETRIA---GTFGYLAPE 572
+ ++ IHRDLKP N+LL K+ DFG I+T + G+ ++APE
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-------CDIQTHMTNNKGSAAWMAPE 173
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ E++P G+L ++ E ++ + L + +G+EYL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER----IDHIKLLQYTSQICKGMEYL- 133
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHRDL NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 190
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY+G D T++AVK + S + EF +E +V+ H+V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 80
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGV 511
LLG G L+V E M G L ++ + E G P + +A ++A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ + F+HRDL N ++ D K+ DFG+ R E GKG + R
Sbjct: 141 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR--- 194
Query: 565 TFGYLAPE 572
++APE
Sbjct: 195 ---WMAPE 199
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 15/182 (8%)
Query: 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
E LG G FG V+ + TK+AVK M+ G +S + F +E V+ ++H LV L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKL- 248
Query: 460 GHCLDGNEKLLVF-EYMPQGTLSRHIFNWAEEGLK-PLEWNRRLTIALDVARGVEYLHGL 517
H + E + + E+M +G+L F ++EG K PL + + + +A G+ ++
Sbjct: 249 -HAVVTKEPIYIITEFMAKGSLLD--FLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE-- 301
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577
+++IHRDL+ +NIL+ + K+ADFGL R+ + + + + APE A NF
Sbjct: 302 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-AINF 359
Query: 578 GS 579
GS
Sbjct: 360 GS 361
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 453 RHLVALLGHCLDGNEKLLV-FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
V L C +EKL Y G L ++I E R A ++ +
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSAL 150
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLA 570
EYLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++
Sbjct: 151 EYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 571 PE 572
PE
Sbjct: 208 PE 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTV---YKGELHDGT--KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +DGT +AVK ++A + + +K EI +L + H H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C D LV EY+P G+L R GL L L A + G+ YLH
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSL-RDYLPRHSIGLAQL-----LLFAQQICEGMAYLH 151
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TFGYLAPE 572
Q +IHRDL N+LL +D K+ DFGL + PEG R G F Y APE
Sbjct: 152 A---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APE 207
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 164
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 51 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 163
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 137
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY+G D T++AVK + S + EF +E +V+ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGV 511
LLG G L+V E M G L ++ + E G P + +A ++A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ + F+HRDL N ++ D K+ DFG+ R E GKG + R
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR--- 197
Query: 565 TFGYLAPE 572
++APE
Sbjct: 198 ---WMAPE 202
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY+G D T++AVK + S + EF +E +V+ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGV 511
LLG G L+V E M G L ++ + E G P + +A ++A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ + F+HRDL N ++ D K+ DFG+ R E GKG + R
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 197
Query: 565 TFGYLAPE 572
++APE
Sbjct: 198 ---WMAPE 202
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 142
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY+G D T++AVK + S + EF +E +V+ H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 82
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGV 511
LLG G L+V E M G L ++ + E G P + +A ++A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ + F+HRDL N ++ D K+ DFG+ R E GKG + R
Sbjct: 143 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 196
Query: 565 TFGYLAPE 572
++APE
Sbjct: 197 ---WMAPE 201
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTV---YKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V L D G +AVK+++ + + L +F+ EI +L ++H ++V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 76
Query: 458 LLGHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G C + L+ EY+P G+L ++ E ++ + L + +G+EYL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL- 131
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +IHR+L NIL+ ++ R K+ DFGL ++ P+ K + + G F Y APE
Sbjct: 132 --GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APE 188
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 140
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++YL A + F+HRDL N +L + KVADFGL R
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 397 FSEENILGRGGFGTVYKGELH--DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
+ +G GGF V K H G +A+K M+ + G L K+EI L +RH+H
Sbjct: 12 YELHETIGTGGFAKV-KLACHILTGEMVAIKIMDKNTL-GSDLPRIKTEIEALKNLRHQH 69
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+ L N+ +V EY P G L +I +++ L E + + V Y+
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYII--SQDRLSEEETR---VVFRQIVSAVAYV 124
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAPE 572
H Q + HRDLKP N+L + + K+ DFGL P+G + G+ Y APE
Sbjct: 125 HS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPE 179
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 204
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+++L A + F+HRDL N +L + KVADFGL R
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V G+ +A+K ++ G +S EF E V+ + H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ EYM G L N+ E + + L + DV +EYL + F
Sbjct: 89 TKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQF 141
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDL N L+ D KV+DFGL R
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTK-IAVKRMEAGVISGKGLTEFKSEIAVLTK 449
++ + + ++LG G F V E K +A+K + + GK + ++EIAVL K
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHK 72
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
++H ++VAL G L+ + + G L I E+G RL V
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLI--FQVLD 127
Query: 510 GVEYLHGLAHQSFIHRDLKPSNIL---LGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF 566
V+YLH L +HRDLKP N+L L +D + ++DFGL ++ E GS+ + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 567 GYLAPE 572
GY+APE
Sbjct: 183 GYVAPE 188
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V G+ +A+K ++ G +S EF E V+ + H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ EYM G L N+ E + + L + DV +EYL + F
Sbjct: 89 TKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQF 141
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDL N L+ D KV+DFGL R
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTK-IAVKRMEAGVISGKGLTEFKSEIAVLTK 449
++ + + ++LG G F V E K +A+K + + GK + ++EIAVL K
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS-MENEIAVLHK 72
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
++H ++VAL G L+ + + G L I E+G RL V
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLI--FQVLD 127
Query: 510 GVEYLHGLAHQSFIHRDLKPSNIL---LGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF 566
V+YLH L +HRDLKP N+L L +D + ++DFGL ++ E GS+ + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 567 GYLAPE 572
GY+APE
Sbjct: 183 GYVAPE 188
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V G+ +A+K ++ G +S EF E V+ + H LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ EYM G L N+ E + + L + DV +EYL + F
Sbjct: 69 TKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQF 121
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDL N L+ D KV+DFGL R
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSR 148
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTK-IAVKRMEAGVISGKGLTEFKSEIAVLTK 449
++ + + ++LG G F V E K +A+K + + GK + ++EIAVL K
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHK 72
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
++H ++VAL G L+ + + G L I E+G RL V
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLI--FQVLD 127
Query: 510 GVEYLHGLAHQSFIHRDLKPSNIL---LGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF 566
V+YLH L +HRDLKP N+L L +D + ++DFGL ++ E GS+ + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 567 GYLAPE 572
GY+APE
Sbjct: 183 GYVAPE 188
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V G+ +A+K ++ G +S EF E V+ + H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ EYM G L N+ E + + L + DV +EYL + F
Sbjct: 73 TKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQF 125
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDL N L+ D KV+DFGL R
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSR 152
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+++L A + F+HRDL N +L + KVADFGL R
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V G+ +A+K ++ G +S EF E V+ + H LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ EYM G L N+ E + + L + DV +EYL + F
Sbjct: 80 TKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQF 132
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDL N L+ D KV+DFGL R
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSR 159
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+++L A + F+HRDL N +L + KVADFGL R
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTK-IAVKRMEAGVISGKGLTEFKSEIAVLTK 449
++ + + ++LG G F V E K +A+K + + GK + ++EIAVL K
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHK 72
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
++H ++VAL G L+ + + G L I E+G RL V
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLI--FQVLD 127
Query: 510 GVEYLHGLAHQSFIHRDLKPSNIL---LGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF 566
V+YLH L +HRDLKP N+L L +D + ++DFGL ++ E GS+ + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 567 GYLAPE 572
GY+APE
Sbjct: 183 GYVAPE 188
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+++L A + F+HRDL N +L + KVADFGL R
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V G+ +A+K ++ G +S EF E V+ + H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ EYM G L N+ E + + L + DV +EYL + F
Sbjct: 74 TKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQF 126
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDL N L+ D KV+DFGL R
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+++L A + F+HRDL N +L + KVADFGL R
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V G+ +A+K ++ G +S EF E V+ + H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
++ EYM G L N+ E + + L + DV +EYL + F
Sbjct: 74 TKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQF 126
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDL N L+ D KV+DFGL R
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 150
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+++L A + F+HRDL N +L + KVADFGL R
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 396 NFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
+F+E ++GRG FG VY G L +DG KI I+ G +++F +E ++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 453 RHLVALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARG 510
++++LLG CL L+V YM G L I N +K L + L VA+G
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+++L A + F+HRDL N +L + KVADFGL R
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY+G D T++AVK + S + EF +E +V+ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGV 511
LLG G L+V E M G L ++ + E G P + +A ++A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ + F+HR+L N ++ D K+ DFG+ R E GKG + R
Sbjct: 144 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 197
Query: 565 TFGYLAPE 572
++APE
Sbjct: 198 ---WMAPE 202
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G FG VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAHAGAKFPIKWTAP 179
Query: 572 E 572
E
Sbjct: 180 E 180
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY+G D T++AVK + S + EF +E +V+ H+V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 84
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGV 511
LLG G L+V E M G L ++ + E G P + +A ++A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ + F+HR+L N ++ D K+ DFG+ R E GKG + R
Sbjct: 145 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 198
Query: 565 TFGYLAPE 572
++APE
Sbjct: 199 ---WMAPE 203
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 129 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAHAGAKFPIKWTAP 182
Query: 572 E 572
E
Sbjct: 183 E 183
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 85
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR--- 199
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 200 ---WMSPE 204
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIA 445
Q + +F ILG G F TV EL + A+K +E +I + E
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 62
Query: 446 VLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
V++++ H V L D + Y G L ++I E R A
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA- 117
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAG 564
++ +EYLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + G
Sbjct: 118 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 565 TFGYLAPE 572
T Y++PE
Sbjct: 175 TAQYVSPE 182
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 133 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 186
Query: 572 E 572
E
Sbjct: 187 E 187
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAHAGAKFPIKWTAP 179
Query: 572 E 572
E
Sbjct: 180 E 180
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 76
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 137 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR--- 190
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 191 ---WMSPE 195
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIA 445
Q + +F ILG G F TV EL + A+K +E +I + E
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 61
Query: 446 VLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
V++++ H V L D + Y G L ++I E R A
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA- 116
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAG 564
++ +EYLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + G
Sbjct: 117 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 565 TFGYLAPE 572
T Y++PE
Sbjct: 174 TAQYVSPE 181
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 128 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 84
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 198
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 199 ---WMSPE 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIA 445
Q + +F ILG G F TV EL + A+K +E +I + E
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60
Query: 446 VLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
V++++ H V L D + Y G L ++I E R A
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA- 115
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAG 564
++ +EYLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + G
Sbjct: 116 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 565 TFGYLAPE 572
T Y++PE
Sbjct: 173 TAQYVSPE 180
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 52/211 (24%)
Query: 396 NFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
+F E ++G GGFG V+K + DG ++R++ + E+ L K+ H +
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE------REVKALAKLDHVN 66
Query: 455 LVALLGHCLDG--------------------NEK----------LLVFEYMPQGTLSRHI 484
+V G C DG N K + E+ +GTL + I
Sbjct: 67 IVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI 125
Query: 485 FNWAEEGLKPLEWNRRLTIAL--DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 542
E L ++ L + L + +GV+Y+H + IHRDLKPSNI L D + K+
Sbjct: 126 EKRRGEKL-----DKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKI 177
Query: 543 ADFGLV-RLAPEGKGSIETRIAGTFGYLAPE 572
DFGLV L +GK TR GT Y++PE
Sbjct: 178 GDFGLVTSLKNDGK---RTRSKGTLRYMSPE 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 121
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 122 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 572 E 572
E
Sbjct: 179 E 179
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 91
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
YL+ F+HRDL N ++ +D K+ DFG+ R
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD----ETCTRFYTA-EIVSALE 146
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 572 E 572
E
Sbjct: 204 E 204
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 128 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 129 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAPAGAKFPIKWTAP 182
Query: 572 E 572
E
Sbjct: 183 E 183
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 133 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAHAGAKFPIKWTAP 186
Query: 572 E 572
E
Sbjct: 187 E 187
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 82
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 143 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 196
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 197 ---WMSPE 201
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 113
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 174 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 227
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 228 ---WMSPE 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 147
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 148 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 572 E 572
E
Sbjct: 205 E 205
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 84
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 198
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 199 ---WMSPE 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 143
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 144 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 572 E 572
E
Sbjct: 201 E 201
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 149
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 150 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 572 E 572
E
Sbjct: 207 E 207
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 144
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 572 E 572
E
Sbjct: 202 E 202
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 143
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 144 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 572 E 572
E
Sbjct: 201 E 201
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 85
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 199
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 200 ---WMSPE 204
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 144
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 572 E 572
E
Sbjct: 202 E 202
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 147
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 148 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 572 E 572
E
Sbjct: 205 E 205
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 146
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 572 E 572
E
Sbjct: 204 E 204
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 146
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 572 E 572
E
Sbjct: 204 E 204
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 22/192 (11%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGT--KIAVKRME--AGVISGKGLTEFKS---- 442
+ + ++++GRG +V + +H T + AVK ME A +S + L E +
Sbjct: 90 KEFYQKYDPKDVIGRG-VSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148
Query: 443 EIAVLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
E +L +V H H++ L+ + LVF+ M +G L F++ E + E R
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETR- 203
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLAPEGKGSIET 560
+I + V +LH + +HRDLKP NILL D+M+ +++DFG L P G
Sbjct: 204 SIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP---GEKLR 257
Query: 561 RIAGTFGYLAPE 572
+ GT GYLAPE
Sbjct: 258 ELCGTPGYLAPE 269
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGT-VYKGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F T V EL + A+K +E +I + E V++++ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 144
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 572 E 572
E
Sbjct: 202 E 202
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 39/198 (19%)
Query: 396 NFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
+F E ++G GGFG V+K + DG +KR++ + E+ L K+ H +
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDHVN 65
Query: 455 LVALLGHCLDGNEK-----------------LLVFEYMPQGTLSRHIFNWAEEGLKPLEW 497
+V G C DG + + E+ +GTL + I E L
Sbjct: 66 IVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL----- 119
Query: 498 NRRLTIAL--DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEG 554
++ L + L + +GV+Y+H + I+RDLKPSNI L D + K+ DFGLV L +G
Sbjct: 120 DKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 176
Query: 555 KGSIETRIAGTFGYLAPE 572
K R GT Y++PE
Sbjct: 177 K---RXRSKGTLRYMSPE 191
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 133 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 186
Query: 572 E 572
E
Sbjct: 187 E 187
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 144
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 572 E 572
E
Sbjct: 202 E 202
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 146
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 572 E 572
E
Sbjct: 204 E 204
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 78
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 139 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 192
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 193 ---WMSPE 197
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 133 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 186
Query: 572 E 572
E
Sbjct: 187 E 187
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 128
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 129 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 572 E 572
E
Sbjct: 186 E 186
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 130 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAPAGAKFPIKWTAP 183
Query: 572 E 572
E
Sbjct: 184 E 184
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 146
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 572 E 572
E
Sbjct: 204 E 204
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 141 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 194
Query: 572 E 572
E
Sbjct: 195 E 195
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 128 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 133 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 186
Query: 572 E 572
E
Sbjct: 187 E 187
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 128 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 132 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 185
Query: 572 E 572
E
Sbjct: 186 E 186
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 130 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 183
Query: 572 E 572
E
Sbjct: 184 E 184
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+F ILG G F TV EL + A+K +E +I + E V++++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
V L D + Y G L ++I E R A ++ +E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA-EIVSALE 146
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAP 571
YLHG + IHRDLKP NILL +DM ++ DFG + L+PE K + GT Y++P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 572 E 572
E
Sbjct: 204 E 204
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
LG G FG V G+ +AVK ++ G +S EF E + K+ H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+V EY+ G L N+ K LE ++ L + DV G+ +L +HQ F
Sbjct: 73 SKEYPIYIVTEYISNGCL----LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE--SHQ-F 125
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK--GSIETRIAGTFGYLAPEYAGNFGSS 580
IHRDL N L+ D+ KV+DFG+ R + + S+ T+ + APE F S
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS--APEVFHYFKYS 183
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 128 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 130 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 183
Query: 572 E 572
E
Sbjct: 184 E 184
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 94
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ FN + + L ++
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 155 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
++ F + LG G F V E G AVK + + GK + ++EIAVL K
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRK 76
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
++H ++VAL N LV + + G L I E+G + T+ V
Sbjct: 77 IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI---VEKGFYTEK--DASTLIRQVLD 131
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIETRIAGTF 566
V YLH + +HRDLKP N+L ++ + ++DFGL ++ EGKG + + GT
Sbjct: 132 AVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTP 186
Query: 567 GYLAPE 572
GY+APE
Sbjct: 187 GYVAPE 192
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 24/156 (15%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
++FIHRDL N L+G++ KVADFGL RL
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHRDL N L+G++ KVADFGL RL G T AG + AP
Sbjct: 128 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 97/182 (53%), Gaps = 25/182 (13%)
Query: 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
E LG G FG V+ + TK+AVK M+ G +S + F +E V+ ++H LV L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKL- 242
Query: 460 GHCLDGNEKLLVF-EYMPQGTLSRHIFNWAEEGLK-PLEWNRRLTIALDVARGVEYLHGL 517
H + E + + E+M +G+L F ++EG K PL + + + +A G+ ++
Sbjct: 243 -HAVVTKEPIYIITEFMAKGSLLD--FLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE-- 295
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577
+++IHRDL+ +NIL+ + K+ADFGL R+ K I+ + APE A NF
Sbjct: 296 -QRNYIHRDLRAANILVSASLVCKIADFGLARVG--AKFPIK--------WTAPE-AINF 343
Query: 578 GS 579
GS
Sbjct: 344 GS 345
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 78
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + E L P ++ + +A ++A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N + +D K+ DFG+ R E GKG + R
Sbjct: 139 AYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 192
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 193 ---WMSPE 197
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 135
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ +N + + L ++
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 196 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHR+L N L+G++ KVADFGL RL G T AG + AP
Sbjct: 335 E---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 388
Query: 572 E 572
E
Sbjct: 389 E 389
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 94
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ +N + + L ++
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 155 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 86
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ +N + + L ++
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 147 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 94
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ +N + + L ++
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 155 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 87
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ +N + + L ++
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 148 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 83
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ +N + + L ++
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 144 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 91
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + L P ++ + +A ++A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
YL+ F+HRDL N ++ +D K+ DFG+ R
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHR+L N L+G++ KVADFGL RL G T AG + AP
Sbjct: 332 E---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 385
Query: 572 E 572
E
Sbjct: 386 E 386
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 94
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ +N + + L ++
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 155 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVY--------KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V K + + TK+AVK +++ + K L++ SE+ ++ + +H+
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHK 79
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHI-----------FNWAEEGLKPLEWNRRLT 502
+++ LLG C ++ EY +G L ++ +N + + L ++
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A VARG+EYL A + IHRDL N+L+ +D K+ADFGL R
Sbjct: 140 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 28/188 (14%)
Query: 403 LGRGGFGTVY----KGELHDG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG+G FG VY KG + D T++A+K + S + EF +E +V+ + H+V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 81
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG-----LKPLEWNRRLTIALDVARGV 511
LLG G L++ E M +G L ++ + L P ++ + +A ++A G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-------GKGSIETRIAG 564
YL+ F+HRDL N ++ +D K+ DFG+ R E GKG + R
Sbjct: 142 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 195
Query: 565 TFGYLAPE 572
+++PE
Sbjct: 196 ---WMSPE 200
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
F + +LGRGGFG V+ ++ K+ K + + KG E +L KV R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V+L + LV M G + HI+N +E + R + + G+E+L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK-GSIETR-IAGTFGYLAPE 572
H ++ I+RDLKP N+LL DD +++D G LA E K G +T+ AGT G++APE
Sbjct: 306 H---QRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGYAGTPGFMAPE 359
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 403 LGRGGFGTVYKGELHDGT-KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G +G VY+G + +AVK ++ + + EF E AV+ +++H +LV LLG
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR-------LTIALDVARGVEYL 514
C ++ E+M G L ++ E NR+ L +A ++ +EYL
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYL----------RECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAP 571
++FIHR+L N L+G++ KVADFGL RL G T AG + AP
Sbjct: 374 EK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAP 427
Query: 572 E 572
E
Sbjct: 428 E 428
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRH 452
++F LG+G FG VY E + +A+K + + +G+ + + EI + + +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
+++ + + D L+ E+ P+G L + + + R T ++A +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----FDEQRSATFMEELADALH 128
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAP 571
Y H + IHRD+KP N+L+G K+ADFG AP S+ R + GT YL P
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
F + +LGRGGFG V+ ++ K+ K + + KG E +L KV R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V+L + LV M G + HI+N +E + R + + G+E+L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK-GSIETR-IAGTFGYLAPE 572
H ++ I+RDLKP N+LL DD +++D G LA E K G +T+ AGT G++APE
Sbjct: 306 H---QRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGYAGTPGFMAPE 359
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
F + +LGRGGFG V+ ++ K+ K + + KG E +L KV R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V+L + LV M G + HI+N +E + R + + G+E+L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK-GSIETR-IAGTFGYLAPE 572
H ++ I+RDLKP N+LL DD +++D G LA E K G +T+ AGT G++APE
Sbjct: 306 H---QRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGYAGTPGFMAPE 359
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRH 452
++F LG+G FG VY E + +A+K + + +G+ + + EI + + +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
+++ + + D L+ E+ P+G L + + + R T ++A +
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----FDEQRSATFMEELADALH 129
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAP 571
Y H + IHRD+KP N+L+G K+ADFG AP S+ R + GT YL P
Sbjct: 130 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPP 182
Query: 572 E 572
E
Sbjct: 183 E 183
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRH 452
++F LG+G FG VY E + +A+K + + +G+ + + EI + + +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
+++ + + D L+ E+ P+G L + + + R T ++A +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----FDEQRSATFMEELADALH 128
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAP 571
Y H + IHRD+KP N+L+G K+ADFG AP S+ R + GT YL P
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
F + +LGRGGFG V+ ++ K+ K + + KG E +L KV R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V+L + LV M G + HI+N +E + R + + G+E+L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK-GSIETR-IAGTFGYLAPE 572
H ++ I+RDLKP N+LL DD +++D G LA E K G +T+ AGT G++APE
Sbjct: 306 H---QRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGYAGTPGFMAPE 359
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 9/184 (4%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-LHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTK 449
N NF E +GRG F VY+ L DG +A+K+++ ++ K + EI +L +
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL-TIALDVA 508
+ H +++ ++ NE +V E G LSR I ++ ++ K L R + + +
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ--KRLIPERTVWKYFVQLC 146
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGY 568
+E++H + +HRD+KP+N+ + K+ D GL R K + + GT Y
Sbjct: 147 SALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYY 202
Query: 569 LAPE 572
++PE
Sbjct: 203 MSPE 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 396 NFSEENILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRH 452
N+ LG G FG V K H G K+A+K + V++ + + EI+ L +RH
Sbjct: 14 NYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
H++ L +E ++V EY +F++ + K E R + VE
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQ-QIISAVE 126
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
Y H +HRDLKP N+LL + + K+ADFGL + +G ++T G+ Y APE
Sbjct: 127 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE 181
Query: 573 ------YAG 575
YAG
Sbjct: 182 VISGKLYAG 190
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 396 NFSEENILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRH 452
N+ LG G FG V K H G K+A+K + V++ + + EI+ L +RH
Sbjct: 15 NYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
H++ L +E ++V EY +F++ + K E R + VE
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQ-QIISAVE 127
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
Y H +HRDLKP N+LL + + K+ADFGL + +G ++T G+ Y APE
Sbjct: 128 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE 182
Query: 573 ------YAG 575
YAG
Sbjct: 183 VISGKLYAG 191
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 6 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 61
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 62 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKD 116
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 117 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 170
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 377 MLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGV 431
M EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K +
Sbjct: 3 MGEAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 59
Query: 432 ISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG 491
S K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 60 -SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREH 113
Query: 492 LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 114 KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 396 NFSEENILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRH 452
N+ LG G FG V K H G K+A+K + V++ + + EI+ L +RH
Sbjct: 5 NYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
H++ L +E ++V EY +F++ + K E R + VE
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQ-QIISAVE 117
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
Y H +HRDLKP N+LL + + K+ADFGL + +G ++T G+ Y APE
Sbjct: 118 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE 172
Query: 573 ------YAG 575
YAG
Sbjct: 173 VISGKLYAG 181
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 3 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 58
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 59 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKD 113
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 114 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 396 NFSEENILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRH 452
N+ LG G FG V K H G K+A+K + V++ + + EI+ L +RH
Sbjct: 9 NYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
H++ L +E ++V EY +F++ + K E R + VE
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQ-QIISAVE 121
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
Y H +HRDLKP N+LL + + K+ADFGL + +G ++T G+ Y APE
Sbjct: 122 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE 176
Query: 573 ------YAG 575
YAG
Sbjct: 177 VISGKLYAG 185
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 4 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 59
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKD 114
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 2 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 57
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKD 112
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 3 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 58
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 59 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXL----LDYVREHKD 113
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 114 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 377 MLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGV 431
M EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K +
Sbjct: 3 MGEAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 59
Query: 432 ISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG 491
S K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 60 -SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREH 113
Query: 492 LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 114 KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 377 MLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGV 431
M EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K +
Sbjct: 3 MGEAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 59
Query: 432 ISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG 491
S K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 60 -SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREH 113
Query: 492 LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 114 KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 377 MLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGV 431
M EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K +
Sbjct: 3 MGEAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 59
Query: 432 ISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG 491
S K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 60 -SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREH 113
Query: 492 LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 114 KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 27 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 82
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 83 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 137
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 138 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 8 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 63
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 64 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 118
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 119 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 4 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 59
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 114
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 2 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 57
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 112
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKIAVK---RMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
+LG G FGTVYKG + +G + + ++ K EF E ++ + H HLV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLH 515
LLG CL +L V + MP G L ++ + G + L L + +A+G+ YL
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLE 157
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ +HRDL N+L+ K+ DFGL RL
Sbjct: 158 ---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 189
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 12 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 67
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 68 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 122
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 123 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 9 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 64
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 119
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 2 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 57
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXL----LDYVREHKD 112
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 2 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 57
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 112
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 403 LGRGGFGTV----YKGELHD-GTKIAVKRM--EAGVISGKGLTEFKSEIAVLTKVRHRHL 455
LG G FG V Y E + G ++AVK + E+G G + + K EI +L + H ++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENI 85
Query: 456 VALLGHCLD--GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
V G C + GN L+ E++P G+L ++ + + ++L A+ + +G++Y
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDY 141
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSI---ETRIAGTFGYLA 570
L + ++HRDL N+L+ + + K+ DFGL + K + R + F Y A
Sbjct: 142 L---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-A 197
Query: 571 PE 572
PE
Sbjct: 198 PE 199
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 403 LGRGGFGTV----YKGE-LHDGTKIAVKRM--EAGVISGKGLTEFKSEIAVLTKVRHRHL 455
LG G FG V Y E + G ++AVK + E+G G + + K EI +L + H ++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENI 73
Query: 456 VALLGHCLD--GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
V G C + GN L+ E++P G+L ++ + + ++L A+ + +G++Y
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDY 129
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSI---ETRIAGTFGYLA 570
L + ++HRDL N+L+ + + K+ DFGL + K + R + F Y A
Sbjct: 130 L---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-A 185
Query: 571 PE 572
PE
Sbjct: 186 PE 187
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKIAVK---RMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
+LG G FGTVYKG + +G + + ++ K EF E ++ + H HLV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLH 515
LLG CL +L V + MP G L ++ + G + L L + +A+G+ YL
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLE 134
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ +HRDL N+L+ K+ DFGL RL
Sbjct: 135 ---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 166
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 20/184 (10%)
Query: 401 NILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVA 457
+ LG G FG V G+ H+ G K+AVK + I + + + EI L RH H++
Sbjct: 22 DTLGVGTFGKVKVGK-HELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L ++ +V EY+ G L +I + G + +RRL + GV+Y H
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKESRRLF--QQILSGVDYCH-- 133
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE----- 572
+HRDLKP N+LL M AK+ADFGL + +G+ + G+ Y APE
Sbjct: 134 -RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGSPNYAAPEVISGR 190
Query: 573 -YAG 575
YAG
Sbjct: 191 LYAG 194
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 385 ISIQVLRNVTNNFSEENILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGKGLTEFKSE 443
I + LR+ F ++G G +G VYKG + G A+K M+ ++G E K E
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQE 70
Query: 444 IAVLTKV-RHRHLVALLGHCLDGN------EKLLVFEYMPQGTLSRHIFNWAEEGLKPLE 496
I +L K HR++ G + N + LV E+ G+++ I N LK E
Sbjct: 71 INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-E 129
Query: 497 WNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG 556
W I ++ RG+ +LH IHRD+K N+LL ++ K+ DFG+ G
Sbjct: 130 WI--AYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 184
Query: 557 SIETRIAGTFGYLAPE 572
T I GT ++APE
Sbjct: 185 RRNTFI-GTPYWMAPE 199
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVISGKGLTEFKSEIAVLTK 449
F + +LG G FGTVYKG + +G K+ A+K + S K E E V+
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 67
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
V + H+ LLG CL +L+ + MP G L ++ E + L + +A+
Sbjct: 68 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 123 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVI-----SGKGLTEFKSEIAVLTKVRHRHLVA 457
LG GG TVY L + T + +K + + L F+ E+ +++ H+++V+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
++ + + LV EY+ TLS +I E PL + + + G+++ H +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI-----ESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
+HRD+KP NIL+ + K+ DFG+ + E + + GT Y +PE A
Sbjct: 131 ---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 374 DIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVI 432
D ++LE ++S+ + F + +G+G GTVY ++ G ++A+++M
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 433 SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL 492
K L +EI V+ + ++ ++V L L G+E +V EY+ G+L+ +
Sbjct: 59 PKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---- 112
Query: 493 KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLA 551
++ + + + + +E+LH IHRD+K NILLG D K+ DFG ++
Sbjct: 113 --MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 552 PEGKGSIETRIAGTFGYLAPE 572
PE S + + GT ++APE
Sbjct: 168 PE--QSKRSEMVGTPYWMAPE 186
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRH 452
++F LG+G FG VY E +A+K + I +G+ + + EI + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
+++ L + D L+ EY P+G L + + + + R TI ++A +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL-----QKSCTFDEQRTATIMEELADALM 137
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
Y HG + IHRD+KP N+LLG K+ADFG AP + + GT YL PE
Sbjct: 138 YCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT---MCGTLDYLPPE 191
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDG--TKIAVKRME-AGVISG 434
EA N + +++L+ F + +LG G FGTVYKG + +G KI V ME S
Sbjct: 36 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSP 92
Query: 435 KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP 494
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 93 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKDN 147
Query: 495 LEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 148 IGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 200
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 374 DIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVI 432
D ++LE ++S+ + F + +G+G GTVY ++ G ++A+++M
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 433 SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL 492
K L +EI V+ + ++ ++V L L G+E +V EY+ G+L+ +
Sbjct: 59 PKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---- 112
Query: 493 KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLA 551
++ + + + + +E+LH IHRD+K NILLG D K+ DFG ++
Sbjct: 113 --MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 552 PEGKGSIETRIAGTFGYLAPE 572
PE S + + GT ++APE
Sbjct: 168 PE--QSKRSXMVGTPYWMAPE 186
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVISGKGLTEFKSEIAVLTK 449
F + +LG G FGTVYKG + +G K+ A+K + S K E E V+
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 70
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
V + H+ LLG CL +L+ + MP G L ++ E + L + +A
Sbjct: 71 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 126 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 374 DIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVI 432
D ++LE ++S+ + F + +G+G GTVY ++ G ++A+++M
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 433 SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL 492
K L +EI V+ + ++ ++V L L G+E +V EY+ G+L+ +
Sbjct: 59 PKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---- 112
Query: 493 KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLA 551
++ + + + + +E+LH IHRD+K NILLG D K+ DFG ++
Sbjct: 113 --MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 552 PEGKGSIETRIAGTFGYLAPE 572
PE S + + GT ++APE
Sbjct: 168 PE--QSKRSTMVGTPYWMAPE 186
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 374 DIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVI 432
D ++LE ++S+ + F + +G+G GTVY ++ G ++A+++M
Sbjct: 3 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Query: 433 SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL 492
K L +EI V+ + ++ ++V L L G+E +V EY+ G+L+ +
Sbjct: 60 PKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---- 113
Query: 493 KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLA 551
++ + + + + +E+LH IHRD+K NILLG D K+ DFG ++
Sbjct: 114 --MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 552 PEGKGSIETRIAGTFGYLAPE 572
PE S + + GT ++APE
Sbjct: 169 PE--QSKRSXMVGTPYWMAPE 187
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 398 SEENILGRGGFGTVYKGELHDGT-----KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
+ + ++G G FG VYKG L + +A+K ++AG + K +F E ++ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSH 105
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
+++ L G +++ EYM G L + + E + + + +A G++
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFL----REKDGEFSVLQLVGMLRGIAAGMK 161
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT--FGYLA 570
YL A+ +++HRDL NIL+ ++ KV+DFGL R+ + + T G + A
Sbjct: 162 YL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 571 PE 572
PE
Sbjct: 219 PE 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +L G FGTVYKG + +G K+ A+K + S
Sbjct: 9 EAPNQAL-LRILKE--TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 64
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKD 119
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 4 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 59
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKD 114
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFG +L
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 402 ILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSE--IAVLTKVRH----RHL 455
++GRG +G VYKG L D +AVK V S F +E I + + H R +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVK-----VFSFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 456 VALLGHCLDGN-EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
V DG E LLV EY P G+L +++ L +W +A V RG+ YL
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWVSSCRLAHSVTRGLAYL 127
Query: 515 H-----GLAHQSFI-HRDLKPSNILLGDDMRAKVADFG---------LVRLAPEGKGSIE 559
H G ++ I HRDL N+L+ +D ++DFG LVR E +I
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 560 TRIAGTFGYLAPE 572
GT Y+APE
Sbjct: 188 E--VGTIRYMAPE 198
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
Query: 401 NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVAL 458
+ LG G FG V GE G K+AVK + I + + K EI L RH H++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+ +V EY+ G L +I ++ +E R + V+Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQ---QILSAVDYCH--- 128
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE------ 572
+HRDLKP N+LL M AK+ADFGL + +G+ ++ G+ Y APE
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPEVISGRL 186
Query: 573 YAG 575
YAG
Sbjct: 187 YAG 189
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 4 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 59
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L + + MP G L ++ E
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKD 114
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFG +L
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 398 SEENILGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLT---EFKSEIAVLTKVRHR 453
S+ ILG G FG V+K E G K+A K +I +G+ E K+EI+V+ ++ H
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAK-----IIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
+L+ L N+ +LV EY+ G L I + E E + L + + G+ +
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIID---ESYNLTELDTILFMK-QICEGIRH 202
Query: 514 LHGLAHQSFIHRDLKPSNILL--GDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLA 570
+H + +H DLKP NIL D + K+ DFGL R P K + GT +LA
Sbjct: 203 MHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLA 256
Query: 571 PE 572
PE
Sbjct: 257 PE 258
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +L G FGTVYKG + +G K+ A+K + S
Sbjct: 2 EAPNQAL-LRILKE--TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 57
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 112
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 92/204 (45%), Gaps = 34/204 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFK--SEIAVLTKVR 451
+F LGRGGFG V++ + D A+KR+ + + L K E+ L K+
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR---LPNRELAREKVMREVKALAKLE 61
Query: 452 HRHLVALLGHCLDGN--EKLL-----VFEYMPQGTLSR--HIFNWAEEGLKPLEWNRR-- 500
H +V L+ N EKL V+ Y+ Q L R ++ +W G +E R
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYI-QMQLCRKENLKDWMN-GRCTIEERERSV 119
Query: 501 -LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR---------- 549
L I L +A VE+LH + +HRDLKPSNI D KV DFGLV
Sbjct: 120 CLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 550 -LAPEGKGSIETRIAGTFGYLAPE 572
L P + T GT Y++PE
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPE 200
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 24/168 (14%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK- 449
R VT++ + ++G+G FG VY GE D A R++ + S +TE + A L +
Sbjct: 20 RVVTHS---DRVIGKGHFGVVYHGEYIDQ---AQNRIQCAIKSLSRITEMQQVEAFLREG 73
Query: 450 -----VRHRHLVALLGHCL--DGNEKLLVFEYMPQGTLSRHIFN-WAEEGLKPLEWNRRL 501
+ H +++AL+G L +G +L+ YM G L + I + +K L +
Sbjct: 74 LLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDL-----I 127
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ L VARG+EYL A Q F+HRDL N +L + KVADFGL R
Sbjct: 128 SFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 395 NNFSEENILGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NN LG G FG V + G+ K+AVK +++ + + SE+ +++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMS 96
Query: 449 KV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL-----KPLEWNRRLT 502
+ +H ++V LLG C G L++ EY G L + AE L +PLE L
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ VA+G+ +L A ++ IHRD+ N+LL + AK+ DFGL R
Sbjct: 157 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +L G FGTVYKG + +G K+ A+K + S
Sbjct: 9 EAPNQAL-LRILKE--TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 64
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 119
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFGL +L
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 2 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 57
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 112
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFG +L
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 395 NNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVISGKGLTEFKSEIAVLTK 449
F + +LG G FGTVYKG + +G K+ A+K + S K E E V+
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 77
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
V + H+ LLG CL +L + + MP G L ++ E + L + +A+
Sbjct: 78 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
G+ YL + +HRDL N+L+ K+ DFG +L
Sbjct: 133 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 4 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 59
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 114
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFG +L
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 374 DIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVI 432
D ++LE +++S+ + F + +G+G GTVY ++ G ++A+++M
Sbjct: 3 DEEILEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Query: 433 SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL 492
K L +EI V+ + ++ ++V L L G+E +V EY+ G+L+ +
Sbjct: 60 PKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---- 113
Query: 493 KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLA 551
++ + + + + +E+LH IHR++K NILLG D K+ DFG ++
Sbjct: 114 --MDEGQIAAVCRECLQALEFLHS---NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 552 PEGKGSIETRIAGTFGYLAPE 572
PE S + + GT ++APE
Sbjct: 169 PE--QSKRSTMVGTPYWMAPE 187
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVIS 433
EA N + +++L+ F + +LG G FGTVYKG + +G K+ A+K + S
Sbjct: 9 EAPNQAL-LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-S 64
Query: 434 GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK 493
K E E V+ V + H+ LLG CL +L+ + MP G L ++ E
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL----LDYVREHKD 119
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ L + +A+G+ YL + +HRDL N+L+ K+ DFG +L
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 83/183 (45%), Gaps = 18/183 (9%)
Query: 401 NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTKVRHRHLVAL 458
+ LG G FG V GE G K+AVK + I + + K EI L RH H++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+ +V EY+ G L +I ++ +E R + V+Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQ---QILSAVDYCH--- 128
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE------ 572
+HRDLKP N+LL M AK+ADFGL + +G+ + G+ Y APE
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVISGRL 186
Query: 573 YAG 575
YAG
Sbjct: 187 YAG 189
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGT--KIAVKRMEA---GVISGKGLTEFKS----EIA 445
N+ + ILGRG +V + +H T + AVK ++ G S + + E + E+
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 446 VLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLE-WNRRLTI 503
+L KV H +++ L LVF+ M +G L F++ E + E R++
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMR 118
Query: 504 ALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLAPEGKGSIETRI 562
AL +E + L + +HRDLKP NILL DDM K+ DFG +L P G +
Sbjct: 119 AL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLREV 170
Query: 563 AGTFGYLAPE 572
GT YLAPE
Sbjct: 171 CGTPSYLAPE 180
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 395 NNFSEENILGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NN LG G FG V + G+ K+AVK +++ + + SE+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMS 104
Query: 449 KV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL-----KPLEWNRRLT 502
+ +H ++V LLG C G L++ EY G L + AE L +PLE L
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ VA+G+ +L A ++ IHRD+ N+LL + AK+ DFGL R
Sbjct: 165 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 403 LGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
LG G +G+VYK +H G +A+K+ V L E EI+++ + H+V G
Sbjct: 37 LGEGSYGSVYKA-IHKETGQIVAIKQ----VPVESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ +V EY G++S I K L + TI +G+EYLH +
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDII----RLRNKTLTEDEIATILQSTLKGLEYLHFMRK- 146
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578
IHRD+K NILL + AK+ADFG+ + + GT ++APE G
Sbjct: 147 --IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIG 201
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGT--KIAVKRMEA---GVISGKGLTEFKS----EIA 445
N+ + ILGRG +V + +H T + AVK ++ G S + + E + E+
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 446 VLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLE-WNRRLTI 503
+L KV H +++ L LVF+ M +G L F++ E + E R++
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMR 131
Query: 504 ALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLAPEGKGSIETRI 562
AL +E + L + +HRDLKP NILL DDM K+ DFG +L P G +
Sbjct: 132 AL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLREV 183
Query: 563 AGTFGYLAPE 572
GT YLAPE
Sbjct: 184 CGTPSYLAPE 193
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGT--KIAVKRMEA---GVISGKGLTEFKS----EIA 445
N+ + ILGRG +V + +H T + AVK ++ G S + + E + E+
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 446 VLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLE-WNRRLTI 503
+L KV H +++ L LVF+ M +G L F++ E + E R++
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMR 131
Query: 504 ALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL-VRLAPEGKGSIETRI 562
AL +E + L + +HRDLKP NILL DDM K+ DFG +L P G +
Sbjct: 132 AL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLRSV 183
Query: 563 AGTFGYLAPE 572
GT YLAPE
Sbjct: 184 CGTPSYLAPE 193
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 376 QMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISG 434
Q A +V+S R NF + +G G G V E H G ++AVK+M+
Sbjct: 29 QFRAALQLVVSPGDPREYLANFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR 85
Query: 435 KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFN--WAEEGL 492
+ L +E+ ++ H ++V + L G+E +V E++ G L+ + + EE +
Sbjct: 86 REL--LFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI 143
Query: 493 KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV---- 548
T+ L V R + YLH Q IHRD+K +ILL D R K++DFG
Sbjct: 144 A--------TVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 192
Query: 549 RLAPEGKGSIETRIAGTFGYLAPE 572
+ P+ K + GT ++APE
Sbjct: 193 KEVPKRKX-----LVGTPYWMAPE 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 401 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
++G+G FG VY G H ++A++ ++ + L FK E+ + RH ++V +G
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
C+ L + + +G R +++ + L+ N+ IA ++ +G+ YLH +
Sbjct: 97 ACM-SPPHLAIITSLCKG---RTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---K 149
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLA---PEGKGSIETRIA-GTFGYLAPE 572
+H+DLK N+ D+ + + DFGL ++ G+ + RI G +LAPE
Sbjct: 150 GILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE 204
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 40/203 (19%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGK---------------GLTEFKSEIAVL 447
L +G F + E D A+K+ E ++ K +FK+E+ ++
Sbjct: 39 LNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
T +++ + + G + +E +++EYM ++ + +E L+ N I + V
Sbjct: 98 TDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF-----DEYFFVLDKNYTCFIPIQV 152
Query: 508 ARGV--------EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
+ + Y+H ++ HRD+KPSNIL+ + R K++DFG E + ++
Sbjct: 153 IKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG------ESEYMVD 204
Query: 560 TRIA---GTFGYLAPEYAGNFGS 579
+I GT+ ++ PE+ N S
Sbjct: 205 KKIKGSRGTYEFMPPEFFSNESS 227
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 147
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 208 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKS--EI 444
+++ N++++F +++LG G +G V G +A+K++E K L ++ EI
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREI 60
Query: 445 AVLTKVRHRHLVALLG----HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
+L +H +++ + + ++ + + + Q L R I + L +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI------STQMLSDDHI 114
Query: 501 LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL---------A 551
R V+ LHG + IHRDLKPSN+L+ + KV DFGL R+
Sbjct: 115 QYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 552 PEGKGSIETRIAGTFGYLAPE 572
P G+ S T T Y APE
Sbjct: 172 PTGQQSGMTEYVATRWYRAPE 192
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 93
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 154 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 88
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 149 CTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 390 LRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
+ + + + +G G +G VYK + G +A+KR+ + EI++L +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL-DVA 508
+ H ++V+L+ LVFE+M + + + + + GL+ + ++ I L +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQ----DSQIKIYLYQLL 129
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
RGV + H +HRDLKP N+L+ D K+ADFGL R
Sbjct: 130 RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 390 LRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
+ + + + +G G +G VYK + G +A+KR+ + EI++L +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL-DVA 508
+ H ++V+L+ LVFE+M + + + + + GL+ + ++ I L +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQ----DSQIKIYLYQLL 129
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
RGV + H +HRDLKP N+L+ D K+ADFGL R
Sbjct: 130 RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 90
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 151 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKS--EI 444
+++ N++++F +++LG G +G V G +A+K++E K L ++ EI
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREI 60
Query: 445 AVLTKVRHRHLVALLG----HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
+L +H +++ + + ++ + + + Q L R I + L +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI------STQMLSDDHI 114
Query: 501 LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL---------A 551
R V+ LHG + IHRDLKPSN+L+ + KV DFGL R+
Sbjct: 115 QYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 552 PEGKGSIETRIAGTFGYLAPE 572
P G+ S T T Y APE
Sbjct: 172 PTGQQSGMTEXVATRWYRAPE 192
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 20/169 (11%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+V R+V + LG+G +G V+K + G +AVK++ + EI +
Sbjct: 2 RVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMI 61
Query: 447 LTKVR-HRHLVALLGHCLDGNEK--LLVFEYMP---QGTLSRHIFNWAEEGLKPLEWNRR 500
LT++ H ++V LL N++ LVF+YM + +I L+P+ +
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANI-------LEPVH---K 111
Query: 501 LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + + ++YLH +HRD+KPSNILL + KVADFGL R
Sbjct: 112 QYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYK-GELHDGTKIAVKRMEAG-VISGKGLTEFKSEIAVLTKVRH 452
+F LG G FG V+ H+G A+K ++ V+ K + E +L+ V H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
++ + G D + ++ +Y+ G L + ++ P+ A +V +E
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVA----KFYAAEVCLALE 120
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH + I+RDLKP NILL + K+ DFG + P+ + + GT Y+APE
Sbjct: 121 YLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPE 173
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKI----AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
+LG G FGTVYKG + DG + A+K + S K E E V+ V ++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYV 81
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
LLG CL +L V + MP G L H+ E L L + +A+G+ YL
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHV----RENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
+ +HRDL N+L+ K+ DFGL RL
Sbjct: 137 DV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 15/178 (8%)
Query: 401 NILGRGGFGTVYKGE----LHDGTKIAVKRMEAGVI--SGKGLTEFKSEIAVLTKVRHRH 454
+LG+GG+G V++ + G A+K ++ +I + K K+E +L +V+H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V L+ G + L+ EY+ G L EG+ +E +A +++ + +L
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIF-MEDTACFYLA-EISMALGHL 137
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H + I+RDLKP NI+L K+ DFGL + + G++ GT Y+APE
Sbjct: 138 H---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHXFCGTIEYMAPE 191
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ ++ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 15/178 (8%)
Query: 401 NILGRGGFGTVYKGE----LHDGTKIAVKRMEAGVI--SGKGLTEFKSEIAVLTKVRHRH 454
+LG+GG+G V++ + G A+K ++ +I + K K+E +L +V+H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V L+ G + L+ EY+ G L EG+ +E +A +++ + +L
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIF-MEDTACFYLA-EISMALGHL 137
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H + I+RDLKP NI+L K+ DFGL + + G++ GT Y+APE
Sbjct: 138 H---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHTFCGTIEYMAPE 191
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 359 GAISETHTVPSS--EPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGEL 416
AI++ PS+ +P + E ++++ + ++ + LG+GGF Y
Sbjct: 8 AAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKR----YMRGRFLGKGGFAKCY---- 59
Query: 417 HDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469
+ T + K + AG + K + + +EIA+ + + H+V G D +
Sbjct: 60 -EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 470 LVFEYMPQGTLSRHIFNWAEEGLKP-LEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 528
+V E + +L + + +P + R TI +GV+YLH IHRDLK
Sbjct: 119 VVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTI-----QGVQYLHN---NRVIHRDLK 169
Query: 529 PSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
N+ L DDM K+ DFGL E G + + GT Y+APE G S
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKKGHS 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 359 GAISETHTVPSS--EPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGEL 416
AI++ PS+ +P + E ++++ + ++ + LG+GGF Y
Sbjct: 8 AAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKR----YMRGRFLGKGGFAKCY---- 59
Query: 417 HDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469
+ T + K + AG + K + + +EIA+ + + H+V G D +
Sbjct: 60 -EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 470 LVFEYMPQGTLSRHIFNWAEEGLKP-LEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 528
+V E + +L + + +P + R TI +GV+YLH IHRDLK
Sbjct: 119 VVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHN---NRVIHRDLK 169
Query: 529 PSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
N+ L DDM K+ DFGL E G + + GT Y+APE G S
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLCGTPNYIAPEVLCKKGHS 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 38/198 (19%)
Query: 384 VISIQVLRNVTNNFSEENI-----LGRGGFGTVYKGELHD------GTKIAVKRMEAGVI 432
V + ++L + F +N+ LG G FG V K T +AVK ++
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA- 65
Query: 433 SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHI-- 484
S L + SE VL +V H H++ L G C LL+ EY G+L SR +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 485 -------------FNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSN 531
+ +E + L ++ A +++G++YL A S +HRDL N
Sbjct: 126 GYLGSGGSRNSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARN 180
Query: 532 ILLGDDMRAKVADFGLVR 549
IL+ + + K++DFGL R
Sbjct: 181 ILVAEGRKMKISDFGLSR 198
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K+ H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKLNHQNIV 97
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 158 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 359 GAISETHTVPSS--EPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGEL 416
AI++ PS+ +P + E ++++ + ++ + LG+GGF Y
Sbjct: 8 AAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKR----YMRGRFLGKGGFAKCY---- 59
Query: 417 HDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469
+ T + K + AG + K + + +EIA+ + + H+V G D +
Sbjct: 60 -EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 470 LVFEYMPQGTLSRHIFNWAEEGLKP-LEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 528
+V E + +L + + +P + R TI +GV+YLH IHRDLK
Sbjct: 119 VVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHN---NRVIHRDLK 169
Query: 529 PSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
N+ L DDM K+ DFGL E G + + GT Y+APE G S
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHS 220
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K+ H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKLNHQNIV 111
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 172 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 401 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+LG+G FG K + ++ V + E + F E+ V+ + H +++ +G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMK-ELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ EY+ GTL I + + W++R++ A D+A G+ YLH +
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHSM--- 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRL------APEGKGSIET-------RIAGTFG 567
+ IHRDL N L+ ++ VADFGL RL PEG S++ + G
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 568 YLAPE 572
++APE
Sbjct: 188 WMAPE 192
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + + L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEEDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ EY +G L ++ G++ + + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 382 NMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRM--EAGVISGKGLTE 439
+ + I+ LR ++ ++GRG FG V K+ ++ + +I
Sbjct: 56 DTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 115
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
F E ++ +V L D +V EYMP G L + N+ P +W R
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD----VPEKWAR 171
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG-LVRLAPEGKGSI 558
T +V ++ +H + FIHRD+KP N+LL K+ADFG +++ EG
Sbjct: 172 FYTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 559 ETRIAGTFGYLAPE 572
+T + GT Y++PE
Sbjct: 227 DTAV-GTPDYISPE 239
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 382 NMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRM--EAGVISGKGLTE 439
+ + I+ LR ++ ++GRG FG V K+ ++ + +I
Sbjct: 61 DTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 120
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
F E ++ +V L D +V EYMP G L + N+ P +W R
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD----VPEKWAR 176
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG-LVRLAPEGKGSI 558
T +V ++ +H + FIHRD+KP N+LL K+ADFG +++ EG
Sbjct: 177 FYTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 559 ETRIAGTFGYLAPE 572
+T + GT Y++PE
Sbjct: 232 DTAV-GTPDYISPE 244
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G +G VYK + + G A+K++ + EI++L +++H ++V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+LVFE++ Q + + + E GL+ + + L + G+ Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK---SFLLQLLNGIAYCHD---RRV 121
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 382 NMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRM--EAGVISGKGLTE 439
+ + I+ LR ++ ++GRG FG V K+ ++ + +I
Sbjct: 61 DTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 120
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
F E ++ +V L D +V EYMP G L + N+ P +W R
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD----VPEKWAR 176
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG-LVRLAPEGKGSI 558
T +V ++ +H + FIHRD+KP N+LL K+ADFG +++ EG
Sbjct: 177 FYTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 559 ETRIAGTFGYLAPE 572
+T + GT Y++PE
Sbjct: 232 DTAV-GTPDYISPE 244
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 49/245 (20%)
Query: 41 MTSLKEIWLHSNAFSGPLPDF--SGVKQLESLSLRDNFFTGPVP---------------- 82
+ SL+ + L N F+G +PDF L L L N F G VP
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 83 ---------DSLVKLESLKIVNMTNNLLQGPVPEFDRSVS---LDMAKGSNNFCLPS-PG 129
D+L+K+ LK+++++ N G +PE ++S L + SNNF P P
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 130 ACDPRLNALLSV-VKLMGYPQRFAENWKGNDPCSDWIG-----------VTCTKGNITVI 177
C N L + ++ G+ + CS+ + + + G+++ +
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSN---CSELVSLHLSFNYLSGTIPSSLGSLSKL 441
Query: 178 NFQKM---NLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234
K+ L G I E K+L+ LIL N+L+G IP GLS L + +SNN+L G
Sbjct: 442 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 501
Query: 235 KIPSF 239
+IP +
Sbjct: 502 EIPKW 506
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 38 IQNMTSLKEIWLHSNAFSGPLPDFSG-VKQLESLSLRDNFFTGPVPDSLVKLESLKIVNM 96
+ N T+L I L +N +G +P + G ++ L L L +N F+G +P L SL +++
Sbjct: 483 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 542
Query: 97 TNNLLQGPVPE--FDRS--VSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFA 152
NL G +P F +S ++ + G + + G + ++++ G
Sbjct: 543 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM-KKECHGAGNLLEFQGIRSEQL 601
Query: 153 ENWKGNDPCSD----WIGVTC----TKGNITVINFQKMNLTGTISPEFASFKSLQRLILA 204
+PC+ + G T G++ ++ L+G I E S L L L
Sbjct: 602 NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLG 661
Query: 205 DNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237
N++SG IP+ + L L LD+S+N+L G+IP
Sbjct: 662 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 694
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 176 VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 235
++N +++G+I E + L L L+ N L G IP+ +S L L E+D+SNN L G
Sbjct: 657 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 716
Query: 236 IP 237
IP
Sbjct: 717 IP 718
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 93/249 (37%), Gaps = 41/249 (16%)
Query: 30 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLE 89
K+ G +DV + +L+ + + SN FS +P L+ L + N +G ++
Sbjct: 186 KISGDVDVSR-CVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCT 244
Query: 90 SLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSP----GACDPRLNALLSVVKLM 145
LK++N+++N GP+P ++ N F P GACD LS
Sbjct: 245 ELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY 304
Query: 146 GYPQRF-------------AENWKGNDPCSDWI---------------------GVTCTK 171
G F + N+ G P + +T
Sbjct: 305 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLS 364
Query: 172 GNITVINFQKMNLTGTISPEFAS--FKSLQRLILADNNLSGMIPEGLSVLGALKELDVSN 229
++ ++ N +G I P +LQ L L +N +G IP LS L L +S
Sbjct: 365 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 424
Query: 230 NQLYGKIPS 238
N L G IPS
Sbjct: 425 NYLSGTIPS 433
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 38 IQNMTSLKEIWLHSNAFSGPLPDFSG-VKQLESLSLRDNFFTGPVPDSLVKLESLKIVNM 96
I +M L + L N SG +PD G ++ L L L N G +P ++ L L +++
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 708
Query: 97 TNNLLQGPVPEFDRSVSLDMAKGSNN--FC-LPSPGACDP 133
+NN L GP+PE + + AK NN C P P CDP
Sbjct: 709 SNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 747
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 87/231 (37%), Gaps = 56/231 (24%)
Query: 48 WLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPD--SLVKLESLKIVNMTNNLLQGPV 105
+L ++ +G + F L SL L N +GPV SL LK +N+++N L P
Sbjct: 80 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFP- 138
Query: 106 PEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWI 165
K S L S D N++ S ++G W +D C +
Sbjct: 139 -----------GKVSGGLKLNSLEVLDLSANSI-SGANVVG--------WVLSDGCGELK 178
Query: 166 GVTCTKGNIT-------VINFQKMNLTG----TISPEFASFKSLQRLILADNNLSGMIPE 214
+ + I+ +N + ++++ T P +LQ L ++ N LSG
Sbjct: 179 HLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSR 238
Query: 215 GLSVLGALKELDVSNNQLYG----------------------KIPSFKSNA 243
+S LK L++S+NQ G +IP F S A
Sbjct: 239 AISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGA 289
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G +G VYK + + G A+K++ + EI++L +++H ++V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+LVFE++ Q + + + E GL+ + + L + G+ Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK---SFLLQLLNGIAYCHD---RRV 121
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKGELHDGT--KIAVKRMEAGVISGKGL-TEFKSEIAVLTKVRHRHLVALL 459
LG G FG V K H T K+A+K + ++ + + EI+ L +RH H++ L
Sbjct: 17 LGEGSFGKV-KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLY 75
Query: 460 GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAH 519
+ ++V EY G L +I E+ + RR + A +EY H
Sbjct: 76 DVITTPTDIVMVIEY-AGGELFDYI---VEKKRMTEDEGRRFFQQIICA--IEYCH---R 126
Query: 520 QSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE------Y 573
+HRDLKP N+LL D++ K+ADFGL + +G ++T G+ Y APE Y
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPEVINGKLY 184
Query: 574 AG 575
AG
Sbjct: 185 AG 186
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
F++ +G+G FG V+KG + K+ ++ + + + + EI VL++ ++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
G L + ++ EY+ G+ + E G PL+ + TI ++ +G++YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPG--PLDETQIATILREILKGLDYLHS 142
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ IHRD+K +N+LL + K+ADFG+ + + T + GT ++APE
Sbjct: 143 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPE 194
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 137
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 198 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462
+G G +G VYK + + G A+K++ + EI++L +++H ++V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522
+LVFE++ Q + + + E GL+ + + L + G+ Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK---SFLLQLLNGIAYCHD---RRV 121
Query: 523 IHRDLKPSNILLGDDMRAKVADFGLVR 549
+HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 88
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 149 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 16/179 (8%)
Query: 397 FSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
F++ + +G+G FG VYKG + H +A+K ++ + + EI VL++ ++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYI 79
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEY 513
G L + ++ EY+ G+ A + LKP LE TI ++ +G++Y
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGS--------ALDLLKPGPLEETYIATILREILKGLDY 131
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
LH + IHRD+K +N+LL + K+ADFG+ + + GT ++APE
Sbjct: 132 LHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPE 186
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 96
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 157 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 114
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 175 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 96
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 157 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 97
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 158 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKS--EI 444
+++ N++++F +++LG G +G V G +A+K++E K L ++ EI
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREI 60
Query: 445 AVLTKVRHRHLVALLG----HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
+L +H +++ + + ++ + + + Q L R I + L +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI------STQMLSDDHI 114
Query: 501 LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL---------A 551
R V+ LHG + IHRDLKPSN+L+ + KV DFGL R+
Sbjct: 115 QYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 552 PEGKGSIETRIAGTFGYLAPE 572
P G+ S T Y APE
Sbjct: 172 PTGQQSGMVEFVATRWYRAPE 192
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 111
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 172 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 113
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 174 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 396 NFSEENIL---GRGGFGTVYKGELHDGTKI-AVKRM-EAGVISGKGLTEFKSEIAVLTKV 450
NF IL G+G FG V + +D K+ A+K M + + + E+ ++ +
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHI---FNWAEEGLKPLEWNRRLTIALDV 507
H LV L D + +V + + G L H+ ++ EE T+ L +
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE-----------TVKLFI 121
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFG 567
V L L +Q IHRD+KP NILL + + DF + + P + + T +AGT
Sbjct: 122 CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITTMAGTKP 179
Query: 568 YLAPE 572
Y+APE
Sbjct: 180 YMAPE 184
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VYSEQDELDFLMEALIISKFNHQNIV 111
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 172 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG GGFG V + D G ++A+K+ +S K + EI ++ K+ H ++V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSA-RE 79
Query: 462 CLDGNEKL-------LVFEYMPQGTLSRHIFNWAEE-GLK--PLEWNRRLTIALDVARGV 511
DG +KL L EY G L +++ + GLK P+ T+ D++ +
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSAL 134
Query: 512 EYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGY 568
YLH IHRDLKP NI+L + K+ D G + +G + T GT Y
Sbjct: 135 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 189
Query: 569 LAPE 572
LAPE
Sbjct: 190 LAPE 193
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG GGFG V + D G ++A+K+ +S K + EI ++ K+ H ++V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSA-RE 80
Query: 462 CLDGNEKL-------LVFEYMPQGTLSRHIFNWAEE-GLK--PLEWNRRLTIALDVARGV 511
DG +KL L EY G L +++ + GLK P+ T+ D++ +
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSAL 135
Query: 512 EYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGY 568
YLH IHRDLKP NI+L + K+ D G + +G + T GT Y
Sbjct: 136 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 190
Query: 569 LAPE 572
LAPE
Sbjct: 191 LAPE 194
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 103
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 164 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ Y +G L ++ G++ + + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 370 SEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEA 429
S+P + E ++++ + ++ + LG+GGF Y + T + K + A
Sbjct: 5 SDPKSAPLKEIPDVLVDPRTMKR----YMRGRFLGKGGFAKCY-----EITDMDTKEVFA 55
Query: 430 GVISGKGL-------TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSR 482
G + K + + +EIA+ + + H+V G D + +V E + +L
Sbjct: 56 GKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL- 114
Query: 483 HIFNWAEEGLKP-LEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 541
+ + +P + R TI +GV+YLH IHRDLK N+ L DDM K
Sbjct: 115 ELHKRRKAVTEPEARYFMRQTI-----QGVQYLHN---NRVIHRDLKLGNLFLNDDMDVK 166
Query: 542 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
+ DFGL E G + + GT Y+APE G S
Sbjct: 167 IGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHS 204
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 22/184 (11%)
Query: 401 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+ RG FG V+K +L + +AVK I K + + E+ L ++H +++ +G
Sbjct: 30 EVKARGRFGCVWKAQLLN-EYVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 461 HCLDGN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH- 515
G + L+ + +G+LS + + WN IA +ARG+ YLH
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFL------KANVVSWNELCHIAETMARGLAYLHE 139
Query: 516 ---GL--AHQSFI-HRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR-IAGTFGY 568
GL H+ I HRD+K N+LL +++ A +ADFGL GK + +T GT Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 569 LAPE 572
+APE
Sbjct: 200 MAPE 203
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 49/245 (20%)
Query: 41 MTSLKEIWLHSNAFSGPLPDF--SGVKQLESLSLRDNFFTGPVP---------------- 82
+ SL+ + L N F+G +PDF L L L N F G VP
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 83 ---------DSLVKLESLKIVNMTNNLLQGPVPEFDRSVS---LDMAKGSNNFCLPS-PG 129
D+L+K+ LK+++++ N G +PE ++S L + SNNF P P
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 130 ACDPRLNALLSV-VKLMGYPQRFAENWKGNDPCSDWIG-----------VTCTKGNITVI 177
C N L + ++ G+ + CS+ + + + G+++ +
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSN---CSELVSLHLSFNYLSGTIPSSLGSLSKL 444
Query: 178 NFQKM---NLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234
K+ L G I E K+L+ LIL N+L+G IP GLS L + +SNN+L G
Sbjct: 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 504
Query: 235 KIPSF 239
+IP +
Sbjct: 505 EIPKW 509
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 38 IQNMTSLKEIWLHSNAFSGPLPDFSG-VKQLESLSLRDNFFTGPVPDSLVKLESLKIVNM 96
+ N T+L I L +N +G +P + G ++ L L L +N F+G +P L SL +++
Sbjct: 486 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545
Query: 97 TNNLLQGPVPE--FDRS--VSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFA 152
NL G +P F +S ++ + G + + G + ++++ G
Sbjct: 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM-KKECHGAGNLLEFQGIRSEQL 604
Query: 153 ENWKGNDPCSD----WIGVTC----TKGNITVINFQKMNLTGTISPEFASFKSLQRLILA 204
+PC+ + G T G++ ++ L+G I E S L L L
Sbjct: 605 NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLG 664
Query: 205 DNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237
N++SG IP+ + L L LD+S+N+L G+IP
Sbjct: 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 697
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 176 VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 235
++N +++G+I E + L L L+ N L G IP+ +S L L E+D+SNN L G
Sbjct: 660 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 719
Query: 236 IP 237
IP
Sbjct: 720 IP 721
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 93/249 (37%), Gaps = 41/249 (16%)
Query: 30 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLE 89
K+ G +DV + +L+ + + SN FS +P L+ L + N +G ++
Sbjct: 189 KISGDVDVSR-CVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCT 247
Query: 90 SLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSP----GACDPRLNALLSVVKLM 145
LK++N+++N GP+P ++ N F P GACD LS
Sbjct: 248 ELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY 307
Query: 146 GYPQRF-------------AENWKGNDPCSDWI---------------------GVTCTK 171
G F + N+ G P + +T
Sbjct: 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLS 367
Query: 172 GNITVINFQKMNLTGTISPEFAS--FKSLQRLILADNNLSGMIPEGLSVLGALKELDVSN 229
++ ++ N +G I P +LQ L L +N +G IP LS L L +S
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427
Query: 230 NQLYGKIPS 238
N L G IPS
Sbjct: 428 NYLSGTIPS 436
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 38 IQNMTSLKEIWLHSNAFSGPLPDFSG-VKQLESLSLRDNFFTGPVPDSLVKLESLKIVNM 96
I +M L + L N SG +PD G ++ L L L N G +P ++ L L +++
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711
Query: 97 TNNLLQGPVPEFDRSVSLDMAKGSNN--FC-LPSPGACDP 133
+NN L GP+PE + + AK NN C P P CDP
Sbjct: 712 SNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 29/180 (16%)
Query: 395 NNFSEENILGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NN LG G FG V + G+ K+AVK +++ + + SE+ +++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMS 89
Query: 449 KV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAE-------------EGL-- 492
+ +H ++V LLG C G L++ EY G L + AE EGL
Sbjct: 90 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 493 ---KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+PLE L + VA+G+ +L A ++ IHRD+ N+LL + AK+ DFGL R
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 21/181 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTK-IAVKRMEAGV-ISGKGLTEFKSEIAVLTKVR---HRHLV 456
+G G +G V+K +L +G + +A+KR+ G L+ + E+AVL + H ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETFEHPNVV 77
Query: 457 ALLGHCL----DGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L C D KL LVFE++ Q L+ ++ E G+ P E + + L RG+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGV-PTETIKDMMFQL--LRGL 133
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
++LH +HRDLKP NIL+ + K+ADFGL R+ T + T Y AP
Sbjct: 134 DFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAP 188
Query: 572 E 572
E
Sbjct: 189 E 189
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 400 ENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V +G L K +A+K ++ G + + EF SE +++ + H ++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY-TERQRREFLSEASIMGQFEHPNI 77
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHI-FNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+ L G + +++ E+M G L + N + + L + + +A G+ YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYL 132
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553
A S++HRDL NIL+ ++ KV+DFGL R E
Sbjct: 133 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 168
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 400 ENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V +G L K +A+K ++ G + + EF SE +++ + H ++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY-TERQRREFLSEASIMGQFEHPNI 79
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHI-FNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+ L G + +++ E+M G L + N + + L + + +A G+ YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYL 134
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553
A S++HRDL NIL+ ++ KV+DFGL R E
Sbjct: 135 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
+++ + ++G G V K+A+KR+ + E EI +++ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHP 73
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGT---LSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
++V+ + +E LV + + G+ + +HI E L+ + TI +V G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG----KGSIETRIAGTF 566
+EYLH IHRD+K NILLG+D ++ADFG+ G + + GT
Sbjct: 134 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 567 GYLAPE 572
++APE
Sbjct: 191 CWMAPE 196
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
+++ + ++G G V K+A+KR+ + E EI +++ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ-TSMDELLKEIQAMSQCHHP 68
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGT---LSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
++V+ + +E LV + + G+ + +HI E L+ + TI +V G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG----KGSIETRIAGTF 566
+EYLH IHRD+K NILLG+D ++ADFG+ G + + GT
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 567 GYLAPE 572
++APE
Sbjct: 186 CWMAPE 191
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 123
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ R
Sbjct: 184 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
F++ +G+G FG V+KG + K+ ++ + + + + EI VL++ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
G L + ++ EY+ G+ + E G PL+ + TI ++ +G++YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPG--PLDETQIATILREILKGLDYLHS 122
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ IHRD+K +N+LL + K+ADFG+ + + T GT ++APE
Sbjct: 123 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPE 174
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 403 LGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG-KGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +GE +AVK ++ V+S + + +F E+ + + HR+L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L G L K+ V E P G+L + +G L R A+ VA G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSR--YAVQVAEGMGYLES- 133
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS--IETRIAGTFGYLAPE 572
+ FIHRDL N+LL K+ DFGL+R P+ ++ F + APE
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 28/198 (14%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++++ ++G G FG VY+ +L D G +A+K+ V+ GK E+ ++ K+ H +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQGKAFK--NRELQIMRKLDHCN 74
Query: 455 LVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIALD 506
+V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL- 131
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAGT 565
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 132 -FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSR 186
Query: 566 FGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 187 Y-YRAPELIFGATDYTSS 203
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 28/198 (14%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++++ ++G G FG VY+ +L D G +A+K+ V+ GK E+ ++ K+ H +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQGKAFK--NRELQIMRKLDHCN 74
Query: 455 LVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIALD 506
+V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL- 131
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAGT 565
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 132 -FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSR 186
Query: 566 FGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 187 Y-YRAPELIFGATDYTSS 203
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 38/198 (19%)
Query: 384 VISIQVLRNVTNNFSEENI-----LGRGGFGTVYKGELHD------GTKIAVKRMEAGVI 432
V + ++L + F +N+ LG G FG V K T +AVK ++
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA- 65
Query: 433 SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHI-- 484
S L + SE VL +V H H++ L G C LL+ EY G+L SR +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 485 -------------FNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSN 531
+ +E + L ++ A +++G++YL A +HRDL N
Sbjct: 126 GYLGSGGSRNSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 532 ILLGDDMRAKVADFGLVR 549
IL+ + + K++DFGL R
Sbjct: 181 ILVAEGRKMKISDFGLSR 198
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V + G +AVK+++ + +F+ EI +L + +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVK 75
Query: 458 LLGHCL-DGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G G + L LV EY+P G L ++ + L+ +R L + + +G+EYL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLR----DFLQRHRARLDASRLLLYSSQICKGMEYL- 130
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +HRDL NIL+ + K+ADFGL +L P K R G F Y APE
Sbjct: 131 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APE 187
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 38/198 (19%)
Query: 384 VISIQVLRNVTNNFSEENI-----LGRGGFGTVYKGELHD------GTKIAVKRMEAGVI 432
V + ++L + F +N+ LG G FG V K T +AVK ++
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA- 65
Query: 433 SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHI-- 484
S L + SE VL +V H H++ L G C LL+ EY G+L SR +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 485 -------------FNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSN 531
+ +E + L ++ A +++G++YL A +HRDL N
Sbjct: 126 GYLGSGGSRNSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 532 ILLGDDMRAKVADFGLVR 549
IL+ + + K++DFGL R
Sbjct: 181 ILVAEGRKMKISDFGLSR 198
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 33/191 (17%)
Query: 396 NFSEENILGRGGFGT-VYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
+F +++LG G GT VY+G + D +AVKR+ S F L + H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFS------FADREVQLLRESDEH 77
Query: 455 LVALLGHCLDGNEKLLVFEYMP----QGTLSRHI--FNWAEEGLKPLEWNRRLTIALDVA 508
+ C EK F+Y+ TL ++ ++A GL+P +T+
Sbjct: 78 PNVIRYFC---TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP------ITLLQQTT 128
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLG-----DDMRAKVADFGLVRLAPEGKGSIETR-- 561
G+ +LH L + +HRDLKP NIL+ ++A ++DFGL + G+ S R
Sbjct: 129 SGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 562 IAGTFGYLAPE 572
+ GT G++APE
Sbjct: 186 VPGTEGWIAPE 196
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V + G +AVK+++ + +F+ EI +L + +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVK 88
Query: 458 LLGHCL-DGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G G + L LV EY+P G L ++ + L+ +R L + + +G+EYL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLR----DFLQRHRARLDASRLLLYSSQICKGMEYL- 143
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +HRDL NIL+ + K+ADFGL +L P K R G F Y APE
Sbjct: 144 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APE 200
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 21/181 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTK-IAVKRMEAGV-ISGKGLTEFKSEIAVLTKVR---HRHLV 456
+G G +G V+K +L +G + +A+KR+ G L+ + E+AVL + H ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETFEHPNVV 77
Query: 457 ALLGHCL----DGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L C D KL LVFE++ Q L+ ++ E G+ P E + + L RG+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGV-PTETIKDMMFQL--LRGL 133
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
++LH +HRDLKP NIL+ + K+ADFGL R+ T + T Y AP
Sbjct: 134 DFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAP 188
Query: 572 E 572
E
Sbjct: 189 E 189
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 21/181 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTK-IAVKRMEAGV-ISGKGLTEFKSEIAVLTKVR---HRHLV 456
+G G +G V+K +L +G + +A+KR+ G L+ + E+AVL + H ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETFEHPNVV 77
Query: 457 ALLGHCL----DGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L C D KL LVFE++ Q L+ ++ E G+ P E + + L RG+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGV-PTETIKDMMFQL--LRGL 133
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
++LH +HRDLKP NIL+ + K+ADFGL R+ T + T Y AP
Sbjct: 134 DFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAP 188
Query: 572 E 572
E
Sbjct: 189 E 189
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V + G +AVK+++ + +F+ EI +L + +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVK 76
Query: 458 LLGHCL-DGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G G + L LV EY+P G L ++ + L+ +R L + + +G+EYL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLR----DFLQRHRARLDASRLLLYSSQICKGMEYL- 131
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +HRDL NIL+ + K+ADFGL +L P K R G F Y APE
Sbjct: 132 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APE 188
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 24/167 (14%)
Query: 403 LGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHR 453
LG G FG V E + +AVK ++ + K L++ SE+ ++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHK 101
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLK-----------PLEWNRRLT 502
+++ LLG C ++ Y +G L ++ G++ + + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ARG+EYL A Q IHRDL N+L+ ++ K+ADFGL R
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
F++ +G+G FG V+KG + K+ ++ + + + + EI VL++ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
G L + ++ EY+ G+ + E G PL+ + TI ++ +G++YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPG--PLDETQIATILREILKGLDYLHS 137
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ IHRD+K +N+LL + K+ADFG+ + + GT ++APE
Sbjct: 138 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPE 189
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 403 LGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG-KGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +GE +AVK ++ V+S + + +F E+ + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L G L K+ V E P G+L + +G L R A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSR--YAVQVAEGMGYLES- 129
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS--IETRIAGTFGYLAPE 572
+ FIHRDL N+LL K+ DFGL+R P+ ++ F + APE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 25/186 (13%)
Query: 401 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
I RG FG V+K +L + +AVK + K + + EI ++H +L+ +
Sbjct: 21 EIKARGRFGCVWKAQLMNDF-VAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 461 HCLDGN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH- 515
G+ E L+ + +G+L+ ++ + WN +A ++RG+ YLH
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKG------NIITWNELCHVAETMSRGLSYLHE 130
Query: 516 ------GLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGL-VRLAPEGKGSIETR-IAGTF 566
G H+ S HRD K N+LL D+ A +ADFGL VR P GK +T GT
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP-GKPPGDTHGQVGTR 189
Query: 567 GYLAPE 572
Y+APE
Sbjct: 190 RYMAPE 195
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 403 LGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG+G FG+V + G +AVK+++ + +F+ EI +L + +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVK 72
Query: 458 LLGHCL-DGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
G G +L LV EY+P G L ++ + L+ +R L + + +G+EYL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLR----DFLQRHRARLDASRLLLYSSQICKGMEYL- 127
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT---FGYLAPE 572
+ +HRDL NIL+ + K+ADFGL +L P K R G F Y APE
Sbjct: 128 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APE 184
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 403 LGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG-KGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +GE +AVK ++ V+S + + +F E+ + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L G L K+ V E P G+L + +G L R A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSR--YAVQVAEGMGYLES- 129
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS--IETRIAGTFGYLAPE 572
+ FIHRDL N+LL K+ DFGL+R P+ ++ F + APE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 403 LGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG-KGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +GE +AVK ++ V+S + + +F E+ + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L G L K+ V E P G+L + +G L R A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSR--YAVQVAEGMGYLES- 129
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS--IETRIAGTFGYLAPE 572
+ FIHRDL N+LL K+ DFGL+R P+ ++ F + APE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 403 LGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG-KGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +GE +AVK ++ V+S + + +F E+ + + HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L G L K+ V E P G+L + +G L R A+ VA G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSR--YAVQVAEGMGYLES- 139
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS--IETRIAGTFGYLAPE 572
+ FIHRDL N+LL K+ DFGL+R P+ ++ F + APE
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
F++ +G+G FG V+KG + K+ ++ + + + + EI VL++ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
G L + ++ EY+ G+ + E G PL+ + TI ++ +G++YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPG--PLDETQIATILREILKGLDYLHS 122
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ IHRD+K +N+LL + K+ADFG+ + + GT ++APE
Sbjct: 123 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPE 174
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 403 LGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG-KGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +GE +AVK ++ V+S + + +F E+ + + HR+L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L G L K+ V E P G+L + +G L R A+ VA G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSR--YAVQVAEGMGYLES- 133
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS--IETRIAGTFGYLAPE 572
+ FIHRDL N+LL K+ DFGL+R P+ ++ F + APE
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 386 SIQVLRNVTNNFSEENI------LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE 439
S++ +VT + + E+ LG G FG VYK + + + +A ++ S + L +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEEELED 80
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
+ EI +L H ++V LL N ++ E+ G + + E +PL ++
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERPLTESQ 136
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
+ + YLH IHRDLK NIL D K+ADFG ++ + +I+
Sbjct: 137 IQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRTIQ 190
Query: 560 TR--IAGTFGYLAPE 572
R GT ++APE
Sbjct: 191 RRDSFIGTPYWMAPE 205
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 403 LGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG-KGLTEFKSEIAVLTKVRHRHLVA 457
LG G FG V +GE +AVK ++ V+S + + +F E+ + + HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L G L K+ V E P G+L + +G L R A+ VA G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSR--YAVQVAEGMGYLES- 139
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS--IETRIAGTFGYLAPE 572
+ FIHRDL N+LL K+ DFGL+R P+ ++ F + APE
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 403 LGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G FG VY+G++ ++AVK + V S + +F E +++K H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIV 97
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYL 514
+G L + ++ E M G L + +P L L +A D+A G +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 515 HGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 549
FIHRD+ N LL G AK+ DFG+ +
Sbjct: 158 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKS---EIAVLTKVRHRHLV 456
+LG G FGTV+KG + +G I + + G F++ + + + H H+V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL-- 514
LLG C G+ LV +Y+P G+L H+ L P L + +A+G+ YL
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ-HRGALGP---QLLLNWGVQIAKGMYYLEE 151
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552
HG+ +HR+L N+LL + +VADFG+ L P
Sbjct: 152 HGM-----VHRNLAARNVLLKSPSQVQVADFGVADLLP 184
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKS---EIAVLTKVRHRHLV 456
+LG G FGTV+KG + +G I + + G F++ + + + H H+V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL-- 514
LLG C G+ LV +Y+P G+L H+ L P L + +A+G+ YL
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ-HRGALGP---QLLLNWGVQIAKGMYYLEE 133
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552
HG+ +HR+L N+LL + +VADFG+ L P
Sbjct: 134 HGM-----VHRNLAARNVLLKSPSQVQVADFGVADLLP 166
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ GK FK+ E+ ++ K+ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQGKA---FKNRELQIMRKLDHC 73
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P ++RH ++ A++ L P+ + + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTL-PVIYVKLYMYQL 131
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 185
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 186 RY-YRAPELIFGATDYTSS 203
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 16/191 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTK 449
++++ + ILG GG V+ +L D +AVK + A + F+ E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 450 VRHRHLVALL----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
+ H +VA+ G +V EY+ G R I + EG P+ R + +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHT--EG--PMTPKRAIEVIA 123
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIA-- 563
D + + + H IHRD+KP+NIL+ KV DFG+ R + S+ A
Sbjct: 124 DACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 564 GTFGYLAPEYA 574
GT YL+PE A
Sbjct: 181 GTAQYLSPEQA 191
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 403 LGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG GGF V E LHDG A+KR+ + E + E + H +++ L+ +
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 462 CLD----GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
CL +E L+ + +GTL I ++G L ++ L + L + RG+E +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG-NFLTEDQILWLLLGICRGLEAIHA- 152
Query: 518 AHQSFIHRDLKPSNILLGDDMRAKVADFG 546
+ + HRDLKP+NILLGD+ + + D G
Sbjct: 153 --KGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 13 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 119 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 369 SSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTV-YKGELHDGTKIAVKRM 427
S P D E + ++ R N F +LG+G FG V E G A+K +
Sbjct: 122 SGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL 181
Query: 428 EAGVISGKG-LTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFN 486
+ VI K + +E VL RH L AL + V EY G L F+
Sbjct: 182 KKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFH 238
Query: 487 WAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546
+ E + +R ++ ++YLH + ++ ++RDLK N++L D K+ DFG
Sbjct: 239 LSRE--RVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFG 294
Query: 547 LVRLAPEGKGSIETRIAGTFGYLAPE 572
L + + +++T GT YLAPE
Sbjct: 295 LCKEGIKDGATMKT-FCGTPEYLAPE 319
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 19/195 (9%)
Query: 386 SIQVLRNVTNNFSEENI------LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE 439
S++ +VT + + E+ LG G FG VYK + + + +A ++ S + L +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEEELED 80
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
+ EI +L H ++V LL N ++ E+ G + + E +PL ++
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERPLTESQ 136
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
+ + YLH IHRDLK NIL D K+ADFG ++ + I+
Sbjct: 137 IQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRXIQ 190
Query: 560 TR--IAGTFGYLAPE 572
R GT ++APE
Sbjct: 191 RRDSFIGTPYWMAPE 205
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKI--AVKRMEA-GVISGKGLTEFKSEIAVLTK-V 450
++F ++G+G FG V H ++ AVK ++ ++ K SE VL K V
Sbjct: 38 SDFHFLKVIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
+H LV L ++ V +Y+ G L H+ L+P R A ++A
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL-QRERCFLEP----RARFYAAEIASA 151
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLA 570
+ YLH L + ++RDLKP NILL + DFGL + E + T GT YLA
Sbjct: 152 LGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYLA 207
Query: 571 PE 572
PE
Sbjct: 208 PE 209
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 402 ILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRH 454
LG+GGF + E+ D K + AG I K L + EI++ + H+H
Sbjct: 24 FLGKGGFAKCF--EISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 78
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G D + +V E + +L + + L E L + G +YL
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR---QIVLGCQYL 133
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
H IHRDLK N+ L +D+ K+ DFGL E G + + GT Y+APE
Sbjct: 134 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVL 189
Query: 575 GNFGSS 580
G S
Sbjct: 190 SKKGHS 195
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 402 ILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRH 454
LG+GGF + E+ D K + AG I K L + EI++ + H+H
Sbjct: 28 FLGKGGFAKCF--EISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 82
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G D + +V E + +L + + L E L + G +YL
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR---QIVLGCQYL 137
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
H IHRDLK N+ L +D+ K+ DFGL E G + + GT Y+APE
Sbjct: 138 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVL 193
Query: 575 GNFGSS 580
G S
Sbjct: 194 SKKGHS 199
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 19/195 (9%)
Query: 386 SIQVLRNVTNNFSEENI------LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE 439
S++ +VT + + E+ LG G FG VYK + + + +A ++ S + L +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEEELED 80
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
+ EI +L H ++V LL N ++ E+ G + + E +PL ++
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERPLTESQ 136
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
+ + YLH IHRDLK NIL D K+ADFG ++ + I+
Sbjct: 137 IQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRXIQ 190
Query: 560 TR--IAGTFGYLAPE 572
R GT ++APE
Sbjct: 191 RRDXFIGTPYWMAPE 205
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 369 SSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTV-YKGELHDGTKIAVKRM 427
S P D E + ++ R N F +LG+G FG V E G A+K +
Sbjct: 125 SGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL 184
Query: 428 EAGVISGKG-LTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFN 486
+ VI K + +E VL RH L AL + V EY G L F+
Sbjct: 185 KKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFH 241
Query: 487 WAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546
+ E + +R ++ ++YLH + ++ ++RDLK N++L D K+ DFG
Sbjct: 242 LSRE--RVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFG 297
Query: 547 LVRLAPEGKGSIETRIAGTFGYLAPE 572
L + + +++T GT YLAPE
Sbjct: 298 LCKEGIKDGATMKT-FCGTPEYLAPE 322
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 400 ENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V G L K +A+K ++AG + K +F SE +++ + H ++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY-TDKQRRDFLSEASIMGQFDHPNI 71
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA--LDVARGV-E 512
+ L G +++ EYM G+L F +G R T+ + + RG+
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDG--------RFTVIQLVGMLRGIGS 121
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT--FGYLA 570
+ L+ S++HRDL NIL+ ++ KV+DFG+ R+ + + T G + A
Sbjct: 122 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 571 PE 572
PE
Sbjct: 182 PE 183
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 400 ENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V G L K +A+K ++AG + K +F SE +++ + H ++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY-TDKQRRDFLSEASIMGQFDHPNI 77
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA--LDVARGV-E 512
+ L G +++ EYM G+L F +G R T+ + + RG+
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDG--------RFTVIQLVGMLRGIGS 127
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT--FGYLA 570
+ L+ S++HRDL NIL+ ++ KV+DFG+ R+ + + T G + A
Sbjct: 128 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 187
Query: 571 PE 572
PE
Sbjct: 188 PE 189
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 402 ILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRH 454
LG+GGF + E+ D K + AG I K L + EI++ + H+H
Sbjct: 24 FLGKGGFAKCF--EISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 78
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G D + +V E + +L + + L E L + G +YL
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR---QIVLGCQYL 133
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
H IHRDLK N+ L +D+ K+ DFGL E G + + GT Y+APE
Sbjct: 134 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVL 189
Query: 575 GNFGSS 580
G S
Sbjct: 190 SKKGHS 195
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 372 PGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM--- 427
PG+++M++ +V +++ +G G +G V H T++A+K++
Sbjct: 28 PGEVEMVKGQPF--------DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPF 79
Query: 428 EAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW 487
E + L EI +L + RH +++ + + + Y+ Q + ++
Sbjct: 80 EHQTYCQRTL----REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKL 135
Query: 488 AEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547
+ + L + + RG++Y+H + +HRDLKPSN+L+ K+ DFGL
Sbjct: 136 LKS--QQLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGL 190
Query: 548 VRLA-PEGKGS-IETRIAGTFGYLAPE 572
R+A PE + T T Y APE
Sbjct: 191 ARIADPEHDHTGFLTEXVATRWYRAPE 217
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + F+HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
++ F + LG G + TVYKG G +A+K ++ G T + EI+++ +++H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELKH 62
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARG 510
++V L N+ LVFE+M L +++ + G P LE N + +G
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYM-DSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLA 570
+ + H +HRDLKP N+L+ + K+ DFGL R + + + T Y A
Sbjct: 121 LAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRA 176
Query: 571 PE 572
P+
Sbjct: 177 PD 178
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 397 FSEENILGRGGFGTVYKG-ELHDGTKIAVKRME-AGVISGKGLTEFKSEIAVLTKVRHRH 454
FS+ +G G FG VY ++ + +A+K+M +G S + + E+ L K+RH +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+ G L + LV EY G+ S + E KPL+ + +G+ YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSAS----DLLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAPE 572
H + IHRD+K NILL + K+ DFG +AP GT ++APE
Sbjct: 171 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPE 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTK 449
++++ + ILG GG V+ +L D +AVK + A + F+ E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 450 VRHRHLVALL----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
+ H +VA+ G +V EY+ G R I + EG P+ R + +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHT--EG--PMTPKRAIEVIA 123
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIET-RIA 563
D + + + H IHRD+KP+NI++ KV DFG+ R +A G +T +
Sbjct: 124 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 564 GTFGYLAPEYA 574
GT YL+PE A
Sbjct: 181 GTAQYLSPEQA 191
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 29/182 (15%)
Query: 382 NMVISIQVLRNVT--NNFSEENILGRGGFGTVYKGELHDGTK-IAVK---RMEAGVISGK 435
N+ +++NV +N+ ++++GRG +G VY + K +A+K RM +I K
Sbjct: 13 NLYFQGAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCK 72
Query: 436 GLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPL 495
+ EI +L +++ +++ L H L E LL F+ + + A+ LK L
Sbjct: 73 RILR---EITILNRLKSDYIIRL--HDLIIPEDLLKFDEL------YIVLEIADSDLKKL 121
Query: 496 --------EWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547
E + + TI ++ G +++H IHRDLKP+N LL D K+ DFGL
Sbjct: 122 FKTPIFLTEQHVK-TILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGL 177
Query: 548 VR 549
R
Sbjct: 178 AR 179
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 402 ILGRGGFGTVYKGELHDGTK------IAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRH 454
+LG G FG V + +K +AVK ++ S + SE+ ++T++ H +
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER-EALMSELKMMTQLGSHEN 110
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTL------SRHIFNW------------AEEGLKPLE 496
+V LLG C L+FEY G L R F+ EE L L
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 497 WNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ L A VA+G+E+L +S +HRDL N+L+ K+ DFGL R
Sbjct: 171 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL---------TEFKSEIAVLTKVRHR 453
LG G +G V ++AV R+ ++ K + K EI + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V GH +GN + L EY G L I + G+ + R + GV Y
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFH---QLMAGVVY 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSIETRIAGTFGYLAPE 572
LHG+ HRD+KP N+LL + K++DFGL + + + ++ GT Y+APE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTK 449
++++ + ILG GG V+ +L D +AVK + A + F+ E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 450 VRHRHLVALL----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
+ H +VA+ G +V EY+ G R I + EG P+ R + +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHT--EG--PMTPKRAIEVIA 123
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIET-RIA 563
D + + + H IHRD+KP+NI++ KV DFG+ R +A G +T +
Sbjct: 124 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 564 GTFGYLAPEYA 574
GT YL+PE A
Sbjct: 181 GTAQYLSPEQA 191
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 402 ILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRH 454
LG+GGF + E+ D K + AG I K L + EI++ + H+H
Sbjct: 46 FLGKGGFAKCF--EISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 100
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G D + +V E + +L + + L E L + G +YL
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR---QIVLGCQYL 155
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
H IHRDLK N+ L +D+ K+ DFGL E G + + GT Y+APE
Sbjct: 156 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVL 211
Query: 575 GNFGSS 580
G S
Sbjct: 212 SKKGHS 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 402 ILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRH 454
LG+GGF + E+ D K + AG I K L + EI++ + H+H
Sbjct: 48 FLGKGGFAKCF--EISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 102
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G D + +V E + +L + + L E L + G +YL
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR---QIVLGCQYL 157
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
H IHRDLK N+ L +D+ K+ DFGL E G + + GT Y+APE
Sbjct: 158 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVL 213
Query: 575 GNFGSS 580
G S
Sbjct: 214 SKKGHS 219
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 391 RNVTNNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLT 448
R N F +LG+G FG V E G A+K ++ VI K + +E VL
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508
RH L AL + V EY G L F+ + E + +R ++
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE--RVFSEDRARFYGAEIV 118
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG--KGSIETRIAGTF 566
++YLH + ++ ++RDLK N++L D K+ DFGL + EG G+ GT
Sbjct: 119 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTP 173
Query: 567 GYLAPE 572
YLAPE
Sbjct: 174 EYLAPE 179
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 27/188 (14%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 101
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 159
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 160 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 213
Query: 565 TFGYLAPE 572
+ Y APE
Sbjct: 214 RY-YRAPE 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 27/188 (14%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 107
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 165
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 166 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 219
Query: 565 TFGYLAPE 572
+ Y APE
Sbjct: 220 RY-YRAPE 226
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 107
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 165
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 166 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 219
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 220 RY-YRAPELIFGATDYTSS 237
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 91
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 147
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 148 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 400 ENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V G L +A+K ++ G + K +F E +++ + H ++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGY-TEKQRRDFLCEASIMGQFDHPNV 106
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
V L G G ++V E+M G L F +G + + + + +A G+ YL
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALD--AFLRKHDGQFTV--IQLVGMLRGIAAGMRYL- 161
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF--GYLAPE 572
A ++HRDL NIL+ ++ KV+DFGL R+ + ++ T G + APE
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE 218
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 74
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRGIASG 130
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 131 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 395 NNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
N+F +LG+G FG V E G A+K + VI K + +E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 453 RHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L AL + +++L V EY G L F+ + E + E R ++ +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSAL 118
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
EYLH + ++RD+K N++L D K+ DFGL + +++T GT YLAP
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 174
Query: 572 E 572
E
Sbjct: 175 E 175
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 391 RNVTNNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLT 448
R N F +LG+G FG V E G A+K ++ VI K + +E VL
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508
RH L AL + V EY G L F+ + E + +R ++
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE--RVFSEDRARFYGAEIV 120
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG--KGSIETRIAGTF 566
++YLH + ++ ++RDLK N++L D K+ DFGL + EG G+ GT
Sbjct: 121 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTP 175
Query: 567 GYLAPE 572
YLAPE
Sbjct: 176 EYLAPE 181
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 27/188 (14%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 109
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 167
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 168 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 221
Query: 565 TFGYLAPE 572
+ Y APE
Sbjct: 222 RY-YRAPE 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 397 FSEENILGRGGFGTVYKG-ELHDGTKIAVKRME-AGVISGKGLTEFKSEIAVLTKVRHRH 454
FS+ +G G FG VY ++ + +A+K+M +G S + + E+ L K+RH +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+ G L + LV EY G+ S + E KPL+ + +G+ YL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSAS----DLLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAPE 572
H + IHRD+K NILL + K+ DFG +AP GT ++APE
Sbjct: 132 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPE 181
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 92
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 150
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 151 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 204
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 205 RY-YRAPELIFGATDYTSS 222
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 391 RNVTNNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLT 448
R N F +LG+G FG V E G A+K ++ VI K + +E VL
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508
RH L AL + V EY G L F+ + E + +R ++
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE--RVFSEDRARFYGAEIV 119
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG--KGSIETRIAGTF 566
++YLH + ++ ++RDLK N++L D K+ DFGL + EG G+ GT
Sbjct: 120 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTP 174
Query: 567 GYLAPE 572
YLAPE
Sbjct: 175 EYLAPE 180
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 395 NNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
N+F +LG+G FG V E G A+K + VI K + +E VL RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 453 RHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L AL + +++L V EY G L F+ + E + E R ++ +
Sbjct: 68 PFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSAL 121
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
EYLH + ++RD+K N++L D K+ DFGL + +++T GT YLAP
Sbjct: 122 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 177
Query: 572 E 572
E
Sbjct: 178 E 178
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 403 LGRGGFG-TVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G FG + DG + +K + +S K E + E+AVL ++H ++V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL-----KPLEWNRRLTIALDVARGVEYLHG 516
+ +V +Y G L + I A++G+ + L+W ++ +AL +++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLAL------KHVHD 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIA--GTFGYLAPEYA 574
+ +HRD+K NI L D ++ DFG+ R+ ++E A GT YL+PE
Sbjct: 144 ---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVELARACIGTPYYLSPEIC 197
Query: 575 GN 576
N
Sbjct: 198 EN 199
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 81
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 139
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 140 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 193
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 194 RY-YRAPELIFGATDYTSS 211
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
F++ +G+G FG V+KG + ++ ++ + + + + EI VL++ ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
G L G++ ++ EY+ G+ + G P + + T+ ++ +G++YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAG--PFDEFQIATMLKEILKGLDYLHS 138
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ IHRD+K +N+LL + K+ADFG+ + + T + GT ++APE
Sbjct: 139 ---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPE 190
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 395 NNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
N+F +LG+G FG V E G A+K + VI K + +E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 453 RHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L AL + +++L V EY G L F+ + E + E R ++ +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSAL 118
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
EYLH + ++RD+K N++L D K+ DFGL + +++T GT YLAP
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 174
Query: 572 E 572
E
Sbjct: 175 E 175
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 27/188 (14%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 111
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 169
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 170 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 223
Query: 565 TFGYLAPE 572
+ Y APE
Sbjct: 224 RY-YRAPE 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 403 LGRGGFGTVYKGE--LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
LG G + TVYKG+ L D +A+K + G T + E+++L ++H ++V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTL-- 65
Query: 461 HCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
H + EK LVFEY L + + + ++ + + + RG+ Y H
Sbjct: 66 HDIIHTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH--- 117
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
Q +HRDLKP N+L+ + K+ADFGL R
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 86
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 144
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 145 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 198
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 199 RY-YRAPELIFGATDYTSS 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 85
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 143
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 144 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 197
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 198 RY-YRAPELIFGATDYTSS 215
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 27/188 (14%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 152
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 210
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 211 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 264
Query: 565 TFGYLAPE 572
+ Y APE
Sbjct: 265 RY-YRAPE 271
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 85
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 143
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 144 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 197
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 198 RY-YRAPELIFGATDYTSS 215
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 27/188 (14%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 78
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 136
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 137 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 190
Query: 565 TFGYLAPE 572
+ Y APE
Sbjct: 191 RY-YRAPE 197
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 402 ILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL-------TEFKSEIAVLTKVRHRH 454
LG+GGF + E+ D K + AG I K L + EI++ + H+H
Sbjct: 22 FLGKGGFAKCF--EISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 76
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G D + +V E + +L + + L E L + G +YL
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR---QIVLGCQYL 131
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574
H IHRDLK N+ L +D+ K+ DFGL E G + + GT Y+APE
Sbjct: 132 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVL 187
Query: 575 GNFGSS 580
G S
Sbjct: 188 SKKGHS 193
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 73
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 131
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 185
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 186 RY-YRAPELIFGATDYTSS 203
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 73
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 131
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 185
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 186 RY-YRAPELIFGATDYTSS 203
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 73
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 131
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICS 185
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 186 RY-YRAPELIFGATDYTSS 203
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 73
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 131
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 185
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 186 RY-YRAPELIFGATDYTSS 203
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 74
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 132
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 133 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 186
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 187 RY-YRAPELIFGATDYTSS 204
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 386 SIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTEFKS-E 443
S+Q+ + +F +LG+G FG V+ E + A+K ++ V+ E E
Sbjct: 10 SLQIKLKI-EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE 68
Query: 444 IAVLTKVRHRHLVALLGHCLDGNEKLL-VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT 502
VL+ + + E L V EY+ G L HI + + +R
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHKFDLSRATF 123
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 562
A ++ G+++LH + ++RDLK NILL D K+ADFG+ + G
Sbjct: 124 YAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NEF 179
Query: 563 AGTFGYLAPE 572
GT Y+APE
Sbjct: 180 CGTPDYIAPE 189
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 396 NFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHR 453
++++ ++G G FG VY+ +L D G +A+K+ V+ K FK+ E+ ++ K+ H
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDK---RFKNRELQIMRKLDHC 77
Query: 454 HLVALLGHCLDGNEKL------LVFEYMPQGT--LSRHIFNWAEEGLKPLEWNRRLTIAL 505
++V L EK LV +Y+P+ ++RH ++ A++ L P+ + + L
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTL-PVIYVKLYMYQL 135
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
R + Y+H HRD+KP N+LL D K+ DFG + G+ ++ + I
Sbjct: 136 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICS 189
Query: 565 TFGYLAPEY---AGNFGSS 580
+ Y APE A ++ SS
Sbjct: 190 RY-YRAPELIFGATDYTSS 207
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 395 NNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
N+F +LG+G FG V E G A+K + VI K + +E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 453 RHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L AL + +++L V EY G L F+ + E + E R ++ +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSAL 118
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG--KGSIETRIAGTFGYL 569
EYLH + ++RD+K N++L D K+ DFGL + EG G+ GT YL
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYL 172
Query: 570 APE 572
APE
Sbjct: 173 APE 175
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 101
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 157
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 158 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 400 ENILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E I+G G G V G L +A+K ++AG + +F SE +++ + H ++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRRDFLSEASIMGQFDHPNI 112
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
+ L G G ++V EYM G+L F +G + + + + V G+ YL
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQFTI--MQLVGMLRGVGAGMRYLS 168
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT--FGYLAPE 572
L ++HRDL N+L+ ++ KV+DFGL R+ + + T G + APE
Sbjct: 169 DLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
K EI + + H ++V GH +GN + L EY G L I + G+ + R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQR 108
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL-APEGKGSI 558
+ GV YLHG+ HRD+KP N+LL + K++DFGL + + +
Sbjct: 109 FFH---QLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 559 ETRIAGTFGYLAPE 572
++ GT Y+APE
Sbjct: 163 LNKMCGTLPYVAPE 176
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 395 NNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
N+F +LG+G FG V E G A+K + VI K + +E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 453 RHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L AL + +++L V EY G L F+ + E + E R ++ +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSAL 118
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG--KGSIETRIAGTFGYL 569
EYLH + ++RD+K N++L D K+ DFGL + EG G+ GT YL
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYL 172
Query: 570 APE 572
APE
Sbjct: 173 APE 175
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLSF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 173
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 19/163 (11%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEEGL--KP-------LEWNRRLTIALD 506
LLG C G +++ E+ G LS ++ + E + KP L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFK-SEIAVLTKVRH 452
+NF +LG+G FG V + + G AVK ++ VI E +E +L+ R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 453 RHLVALLGHCLDGNEKLL-VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
+ L C ++L V E++ G L HI + + + R A ++ +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-----QKSRRFDEARARFYAAEIISAL 137
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG--KGSIETRIAGTFGYL 569
+LH + I+RDLK N+LL + K+ADFG+ + EG G GT Y+
Sbjct: 138 MFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYI 191
Query: 570 APE 572
APE
Sbjct: 192 APE 194
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 400 ENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V G L K +A+K +++G + K +F SE +++ + H ++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNV 96
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
+ L G +++ E+M G+L ++ + + + + +A G++YL
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLD----SFLRQNDGQFTVIQLVGMLRGIAAGMKYL- 151
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
A +++HRDL NIL+ ++ KV+DFGL R
Sbjct: 152 --ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 184
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 395 NNFSEENILGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NN LG G FG V + G+ K+AVK +++ + + SE+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMS 104
Query: 449 KV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ +H ++V LLG C G L++ EY G L N+ + LE + IA
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDL----LNFLRRKSRVLETDPAFAIANST 160
Query: 508 ARGVEYLHG----------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A + LH LA ++ IHRD+ N+LL + AK+ DFGL R
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 173
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 117
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 172
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 117
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 172
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + L +G+ +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--LQGLAF 125
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 126 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 180
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 400 ENILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E I+G G G V G L +A+K ++AG + +F SE +++ + H ++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRRDFLSEASIMGQFDHPNI 112
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
+ L G G ++V EYM G+L F +G + + + + V G+ YL
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQFTI--MQLVGMLRGVGAGMRYLS 168
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT--FGYLAPE 572
L ++HRDL N+L+ ++ KV+DFGL R+ + + T G + APE
Sbjct: 169 DLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 45/211 (21%)
Query: 388 QVLRNVTNNFSEENILGRGGFGT-VYKGELHDGTKIAVKRM-----EAGVISGKGLTEFK 441
Q L+N+ E ILG G GT V++G G +AVKRM + ++ K LTE
Sbjct: 11 QSLKNLV---VSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD 66
Query: 442 SEIAVL----TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEW 497
V+ ++ R L L C + L+ + N ++E LK +
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESK------------NVSDENLKLQKE 114
Query: 498 NRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL-------------GDDMRAKVAD 544
+++ +A GV +LH L IHRDLKP NIL+ +++R ++D
Sbjct: 115 YNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 545 FGLVRLAPEGKGSIETRI---AGTFGYLAPE 572
FGL + G+ S T + +GT G+ APE
Sbjct: 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 120 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 174
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 395 NNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
N+F +LG+G FG V E G A+K + VI K + +E VL RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 453 RHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L AL + +++L V EY G L F+ + E + E R ++ +
Sbjct: 70 PFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEE--RARFYGAEIVSAL 123
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG--KGSIETRIAGTFGYL 569
EYLH + ++RD+K N++L D K+ DFGL + EG G+ GT YL
Sbjct: 124 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYL 177
Query: 570 APE 572
APE
Sbjct: 178 APE 180
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + L +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--LQGLAF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 173
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 20/187 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELHDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTK 449
++ ++ EN +GRG +G V K + GT+I A K++ + + + FK EI ++
Sbjct: 6 DINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKS 62
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ H +++ L D + LV E G L + + + + I DV
Sbjct: 63 LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLS 117
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL-VRLAPEGKGSIETRIAGT 565
V Y H L + HRDLKP N L D K+ DFGL R P G + GT
Sbjct: 118 AVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP---GKMMRTKVGT 171
Query: 566 FGYLAPE 572
Y++P+
Sbjct: 172 PYYVSPQ 178
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 173
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 121 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 122
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 123 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 121
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + L +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--LQGLAF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 20/187 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELHDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTK 449
++ ++ EN +GRG +G V K + GT+I A K++ + + + FK EI ++
Sbjct: 23 DINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKS 79
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ H +++ L D + LV E G L + + + + I DV
Sbjct: 80 LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLS 134
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL-VRLAPEGKGSIETRIAGT 565
V Y H L + HRDLKP N L D K+ DFGL R P G + GT
Sbjct: 135 AVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP---GKMMRTKVGT 188
Query: 566 FGYLAPE 572
Y++P+
Sbjct: 189 PYYVSPQ 195
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 395 NNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKG-LTEFKSEIAVLTKVRH 452
N+F +LG+G FG V E G A+K + VI K + +E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 453 RHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
L AL + +++L V EY G L F+ + E + E R ++ +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEE--RARFYGAEIVSAL 118
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG--KGSIETRIAGTFGYL 569
EYLH + ++RD+K N++L D K+ DFGL + EG G+ GT YL
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYL 172
Query: 570 APE 572
APE
Sbjct: 173 APE 175
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 121
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 121 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + L +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--LQGLAF 117
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + L +G+ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--LQGLAF 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 120 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 121 CHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 120 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 117
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + L +G+ +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--LQGLAF 122
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 123 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 177
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F +G G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EYMP G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ KVADFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + + + +G+ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 120 CHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 400 ENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V G L K +A+K ++AG + K +F SE +++ + H ++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY-TDKQRRDFLSEASIMGQFDHPNI 92
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA--LDVARGV-E 512
+ L G +++ EYM G+L F +G R T+ + + RG+
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDG--------RFTVIQLVGMLRGIGS 142
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT--FGYLA 570
+ L+ S +HRDL NIL+ ++ KV+DFG+ R+ + + T G + A
Sbjct: 143 GMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 202
Query: 571 PE 572
PE
Sbjct: 203 PE 204
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + L +G+ +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--LQGLAF 125
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 126 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 180
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F +G G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EYMP G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ KVADFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 395 NNFSEENILGRGGFGTVY---KGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
++F +LG+G FG V+ K D G A+K ++ + + K E +L V
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +V L + L+ +++ G L F + + E + + +A ++A G
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELALG 142
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLA 570
+++LH L I+RDLKP NILL ++ K+ DFGL + A + + + GT Y+A
Sbjct: 143 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMA 198
Query: 571 PEYAGNFGSS 580
PE G S
Sbjct: 199 PEVVNRQGHS 208
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
+V +++ LG G FG V++ E G A K + S K + EI ++ +
Sbjct: 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV--RKEIQTMSVL 211
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
RH LV L D NE ++++E+M G L + A+E K E + + V +G
Sbjct: 212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV---ADEHNKMSE-DEAVEYMRQVCKG 267
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDM--RAKVADFGLV-RLAPEGKGSIETRIAGTFG 567
+ ++H +++H DLKP NI+ K+ DFGL L P+ + T GT
Sbjct: 268 LCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAE 321
Query: 568 YLAPEYA 574
+ APE A
Sbjct: 322 FAAPEVA 328
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V EYM G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 386 SIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTEFKS-E 443
S+Q+ + +F +LG+G FG V+ E + A+K ++ V+ E E
Sbjct: 9 SLQIKLKI-EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE 67
Query: 444 IAVLTKVRHRHLVALLGHCLDGNEKLL-VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT 502
VL+ + + E L V EY+ G L HI + + +R
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHKFDLSRATF 122
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 562
A ++ G+++LH + ++RDLK NILL D K+ADFG+ + G
Sbjct: 123 YAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NXF 178
Query: 563 AGTFGYLAPE 572
GT Y+APE
Sbjct: 179 CGTPDYIAPE 188
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G FG VYK + + G A K +E S + L ++ EI +L H ++V LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT---IALDVARGVEYLHGLA 518
+ ++ E+ P G + + LE +R LT I + + +E L+ L
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIM----------LELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR--IAGTFGYLAPE 572
+ IHRDLK N+L+ + ++ADFG ++ + +++ R GT ++APE
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFG---VSAKNLKTLQKRDSFIGTPYWMAPE 179
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 391 RNVTNNFSEEN---ILGR-GGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+VT + + E+ I+G G FG VYK + + + +A ++ S + L ++ EI +
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKV-IDTKSEEELEDYMVEIDI 60
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L H ++V LL N ++ E+ G + + E +PL ++ +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQ 116
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR--IAG 564
+ YLH IHRDLK NIL D K+ADFG+ A + I+ R G
Sbjct: 117 TLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTXIQRRDSFIG 171
Query: 565 TFGYLAPE 572
T ++APE
Sbjct: 172 TPYWMAPE 179
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
+V +++ LG G FG V++ E G A K + S K + EI ++ +
Sbjct: 48 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV--RKEIQTMSVL 105
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
RH LV L D NE ++++E+M G L + A+E K E + + V +G
Sbjct: 106 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV---ADEHNKMSE-DEAVEYMRQVCKG 161
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDM--RAKVADFGLV-RLAPEGKGSIETRIAGTFG 567
+ ++H +++H DLKP NI+ K+ DFGL L P+ + T GT
Sbjct: 162 LCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAE 215
Query: 568 YLAPEYA 574
+ APE A
Sbjct: 216 FAAPEVA 222
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEEGLKP-------LEWNRRLTIALDVA 508
LLG C G +++ E+ G LS ++ + E + L + + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G FG VYK + + G A K +E S + L ++ EI +L H ++V LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT---IALDVARGVEYLHGLA 518
+ ++ E+ P G + + LE +R LT I + + +E L+ L
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIM----------LELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR--IAGTFGYLAPE 572
+ IHRDLK N+L+ + ++ADFG ++ + +++ R GT ++APE
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFG---VSAKNLKTLQKRDSFIGTPYWMAPE 187
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 390 LRNVTNNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVIS----GKGLTEFKSEI 444
+++ + + + LG G F TVYK + +I A+K+++ G S G T + EI
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EI 63
Query: 445 AVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA 504
+L ++ H +++ LL + LVF++M T I L P + +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM--ETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
L +G+EYLH +HRDLKP+N+LL ++ K+ADFGL +
Sbjct: 122 L---QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 31/192 (16%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGL--------TEFKSE 443
N+ F +LG G F V+ + +R+ + + K + + ++E
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVF---------LVKQRLTGKLFALKCIKKSPAFRDSSLENE 56
Query: 444 IAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTI 503
IAVL K++H ++V L LV + + G L I E G+ E + L I
Sbjct: 57 IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL---ERGVYT-EKDASLVI 112
Query: 504 ALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIET 560
V V+YLH +HRDLKP N+L ++ + + DFGL ++ G I +
Sbjct: 113 Q-QVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMS 165
Query: 561 RIAGTFGYLAPE 572
GT GY+APE
Sbjct: 166 TACGTPGYVAPE 177
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP-LEWNRRLTIAL 505
LLG C G +++ E+ G LS ++ + E+ K L + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + + A G+ PL + L +G+ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGI-PLPLIKSYLFQL--LQGLAF 121
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRM-EAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
+LG+G +G VY G +L + +IA+K + E + L E EIA+ ++H+++V L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQYL 85
Query: 460 GHCLDGNEKLLVFEYMPQGTLSRHIFN-WAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
G + + E +P G+LS + + W PL+ N + TI + +E L L
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWG-----PLKDNEQ-TIGFYTKQILEGLKYLH 139
Query: 519 HQSFIHRDLKPSNILLGDDMRA-KVADFGLV-RLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+K N+L+ K++DFG RLA G GT Y+APE
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPE 193
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 403 LGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+GRG FG V+ G L D T +AVK + +F E +L + H ++V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRE-TLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
C +V E + G + EG + L L + D A G+EYL +
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRT---EGAR-LRVKTLLQMVGDAAAGMEYLES---KC 233
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 554
IHRDL N L+ + K++DFG+ R +G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHI---------FNWAEEGLKP--LEWNRRLTIA 504
LLG C G +++ E+ G LS ++ + A E L L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
VA+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 395 NNFSEENILGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NF + +G G +G VYK GE+ KI + GV S EI++L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA-----IREISLLK 57
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508
++ H ++V LL N+ LVFE++ Q L + + A G+ PL + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--L 113
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGY 568
+G+ + H +HRDLKP N+L+ + K+ADFGL R A T T Y
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWY 169
Query: 569 LAPE 572
APE
Sbjct: 170 RAPE 173
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 395 NNFSEENILGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NF + +G G +G VYK GE+ KI + GV S EI++L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA-----IREISLLK 56
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508
++ H ++V LL N+ LVFE++ Q L + + A G+ PL + L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGI-PLPLIKSYLFQL--L 112
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGY 568
+G+ + H +HRDLKP N+L+ + K+ADFGL R A T T Y
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWY 168
Query: 569 LAPE 572
APE
Sbjct: 169 RAPE 172
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 403 LGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+GRG FG V+ G L D T +AVK + +F E +L + H ++V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRE-TLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
C +V E + G + EG + L L + D A G+EYL +
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRT---EGAR-LRVKTLLQMVGDAAAGMEYLES---KC 233
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 554
IHRDL N L+ + K++DFG+ R +G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRM-EAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
+LG+G +G VY G +L + +IA+K + E + L E EIA+ ++H+++V L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQYL 71
Query: 460 GHCLDGNEKLLVFEYMPQGTLSRHIFN-WAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
G + + E +P G+LS + + W PL+ N + TI + +E L L
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWG-----PLKDNEQ-TIGFYTKQILEGLKYLH 125
Query: 519 HQSFIHRDLKPSNILLGDDMRA-KVADFGLV-RLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+K N+L+ K++DFG RLA G GT Y+APE
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPE 179
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELHDGTK-IAVK---RMEAGVISGKGLTEFKSEIAVL 447
+V +N+ ++++GRG +G VY + K +A+K RM +I K + EI +L
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR---EITIL 79
Query: 448 TKVRHRHLVALLG-----HCLDGNEKLLVFEYMP---QGTLSRHIFNWAEEGLKPLEWNR 499
+++ +++ L L +E +V E + IF EE +K
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF-LTEEHIK------ 132
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
TI ++ G ++H IHRDLKP+N LL D KV DFGL R
Sbjct: 133 --TILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 380 AGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKG-L 437
A +V+ ++ +R ++F ++GRG F V ++ G A+K M + +G +
Sbjct: 46 AEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV 105
Query: 438 TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEW 497
+ F+ E VL R + L D N LV EY G L + + E P E
Sbjct: 106 SCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER--IPAEM 163
Query: 498 NRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS 557
R +A ++ ++ +H L ++HRD+KP NILL ++ADFG L G+
Sbjct: 164 AR-FYLA-EIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSC-LKLRADGT 217
Query: 558 IETRIA-GTFGYLAPE 572
+ + +A GT YL+PE
Sbjct: 218 VRSLVAVGTPDYLSPE 233
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGK-GLTEFKSEIAVLTKVRH 452
N+FS I+GRGGFG VY D G A+K ++ I K G T +E +L+ V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 453 RH--LVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ + + +KL + + M G L H+ ++ G+ E + R A ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL---SQHGVFS-EADMRFYAA-EIIL 303
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+E++H + ++RDLKP+NILL + +++D GL + K GT GY+
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 570 APE 572
APE
Sbjct: 358 APE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGK-GLTEFKSEIAVLTKVRH 452
N+FS I+GRGGFG VY D G A+K ++ I K G T +E +L+ V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 453 RH--LVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ + + +KL + + M G L H+ ++ G+ E + R A ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL---SQHGVFS-EADMRFYAA-EIIL 303
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+E++H + ++RDLKP+NILL + +++D GL + K GT GY+
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 570 APE 572
APE
Sbjct: 358 APE 360
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGK-GLTEFKSEIAVLTKVRH 452
N+FS I+GRGGFG VY D G A+K ++ I K G T +E +L+ V
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 453 RH--LVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ + + +KL + + M G L H+ ++ G+ E + R A ++
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL---SQHGVFS-EADMRFYAA-EIIL 302
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+E++H + ++RDLKP+NILL + +++D GL + K GT GY+
Sbjct: 303 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 356
Query: 570 APE 572
APE
Sbjct: 357 APE 359
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGK-GLTEFKSEIAVLTKVRH 452
N+FS I+GRGGFG VY D G A+K ++ I K G T +E +L+ V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 453 RH--LVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ + + +KL + + M G L H+ ++ G+ E + R A ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL---SQHGVFS-EADMRFYAA-EIIL 303
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+E++H + ++RDLKP+NILL + +++D GL + K GT GY+
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 570 APE 572
APE
Sbjct: 358 APE 360
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 401 NILGRGGFGTVYKGEL--HDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
ILG G FG VY+G H G KI AVK + + +F SE ++ + H H+V
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+G ++ ++ E P G L H + LK L + +L + + + YL
Sbjct: 77 KLIG-IIEEEPTWIIMELYPYGELG-HYLERNKNSLKVL---TLVLYSLQICKAMAYLES 131
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ + +HRD+ NIL+ K+ DFGL R + + +++PE
Sbjct: 132 I---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + A G+ PL + + + +G+ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQD-LKTFMDASALTGI-PLPLIK--SYLFQLLQGLAF 121
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 401 NILGRGGFGTVYKGEL--HDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
ILG G FG VY+G H G KI AVK + + +F SE ++ + H H+V
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+G ++ ++ E P G L H + LK L + +L + + + YL
Sbjct: 73 KLIG-IIEEEPTWIIMELYPYGELG-HYLERNKNSLKVL---TLVLYSLQICKAMAYLES 127
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG---KGSIETRIAGTFGYLAPE 572
+ + +HRD+ NIL+ K+ DFGL R + K S+ TR+ +++PE
Sbjct: 128 I---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLP--IKWMSPE 180
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 401 NILGRGGFGTVYKGEL--HDGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
ILG G FG VY+G H G KI AVK + + +F SE ++ + H H+V
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+G ++ ++ E P G L H + LK L + +L + + + YL
Sbjct: 89 KLIG-IIEEEPTWIIMELYPYGELG-HYLERNKNSLKVL---TLVLYSLQICKAMAYLES 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + +HRD+ NIL+ K+ DFGL R
Sbjct: 144 I---NCVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEEGLKP-------LEWNRRLTIALDVA 508
LLG C G +++ E+ G LS ++ + E + L + + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+G+E+L A + IHRDL NILL + K+ DFGL R
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + A G+ PL + L +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGI-PLPLIKSYLFQL--LQGLAF 118
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 119 CHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 402 ILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
++G G +G V K D G +A+K+ EI +L ++RH +LV LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKP--LEWNRRLTIALDVARGVEYLHGLA 518
C LVFE++ L + L P L++ + G+ + H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILD-------DLELFPNGLDYQVVQKYLFQIINGIGFCHS-- 142
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGTFGYLAPE 572
+ IHRD+KP NIL+ K+ DFG R AP G + T Y APE
Sbjct: 143 -HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP---GEVYDDEVATRWYRAPE 194
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ L + + A G+ PL + + + +G+ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 121
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 CHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ L + + A G+ PL + + + +G+ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGI-PLPLIK--SYLFQLLQGLAF 119
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 120 CHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ E + R A + E
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAA-QIVLTFE 141
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG T + GT YLAPE
Sbjct: 142 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRTWT-LCGTPEYLAPE 194
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 400 ENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V G L K +A+K ++ G + K +F E +++ + H ++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNI 85
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY-L 514
+ L G ++V EYM G+L LK + + + + RG+ +
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTF--------LKKNDGQFTVIQLVGMLRGISAGM 137
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGT--FGYLAPE 572
L+ ++HRDL NIL+ ++ KV+DFGL R+ + + T G + APE
Sbjct: 138 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 383 MVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRM--EAGVISGKGLTEF 440
+V I+ L+ ++ ++GRG FG V K+ ++ + +I F
Sbjct: 63 IVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFF 122
Query: 441 KSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
E ++ +V L D +V EYMP G L + N+ P +W +
Sbjct: 123 WEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD----VPEKWAKF 178
Query: 501 LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG-LVRLAPEGKGSIE 559
T +V ++ +H + IHRD+KP N+LL K+ADFG +++ G +
Sbjct: 179 YTA--EVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 560 TRIAGTFGYLAPE 572
T + GT Y++PE
Sbjct: 234 TAV-GTPDYISPE 245
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG T + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRTWT-LCGTPEYLAPE 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 22/172 (12%)
Query: 395 NNFSEENILGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NN LG G FG V + G+ K+AVK +++ + + SE+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMS 104
Query: 449 KV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ +H ++V LLG C G L++ EY G L N+ + LE + IA
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDL----LNFLRRKSRVLETDPAFAIANST 160
Query: 508 ARGVEYLHG----------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ LH LA ++ IHRD+ N+LL + AK+ DFGL R
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 74
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V E M G+L + + + + + +A G
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----RKHDAQFTVIQLVGMLRGIASG 130
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 131 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 391 RNVTNNFSE-ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
R+ ++F E E+ LGRG VY+ + K ++ + K + ++EI VL +
Sbjct: 48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV---RTEIGVLLR 104
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL-DVA 508
+ H +++ L E LV E + G L I E+G R A+ +
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI---VEKGYYS---ERDAADAVKQIL 158
Query: 509 RGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGLVRLAPEGKGSIETRIAGT 565
V YLH +HRDLKP N+L D K+ADFGL ++ E + ++T + GT
Sbjct: 159 EAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-EHQVLMKT-VCGT 213
Query: 566 FGYLAPE 572
GY APE
Sbjct: 214 PGYCAPE 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ Q L + A G+ PL + L +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGI-PLPLIKSYLFQL--LQGLAF 117
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+L+ + K+ADFGL R A T T Y APE
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 172
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F +G G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ KVADFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 28/193 (14%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVK--RMEAGVISGKGLTEFKSEIAVLTKV 450
T+ + +G G +GTVYK + H G +A+K R+ G G ++ + E+A+L ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGE-EGLPISTVR-EVALLRRL 60
Query: 451 R---HRHLVALLGHC----LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT 502
H ++V L+ C D K+ LVFE++ Q L ++ GL P E + L
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGL-PAETIKDLM 118
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 562
RG+++LH +HRDLKP NIL+ K+ADFGL R+ S + +
Sbjct: 119 RQF--LRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIY-----SYQMAL 168
Query: 563 AG---TFGYLAPE 572
A T Y APE
Sbjct: 169 APVVVTLWYRAPE 181
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTK 449
++++ + ILG GG V+ +L +AVK + A + F+ E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 450 VRHRHLVALLG----HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
+ H +VA+ G +V EY+ G R I + EG P+ R + +
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYV-DGVTLRDIVHT--EG--PMTPKRAIEVIA 123
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIET-RIA 563
D + + + H IHRD+KP+NI++ KV DFG+ R +A G +T +
Sbjct: 124 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 564 GTFGYLAPEYA 574
GT YL+PE A
Sbjct: 181 GTAQYLSPEQA 191
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 368 PSSEPGDI---QMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHD-GTKIA 423
P EP + Q A +V+ R+ +NF + +G G G V + G +A
Sbjct: 2 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVA 58
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
VK+M+ + L +E+ ++ +H ++V + L G+E +V E++ G L+
Sbjct: 59 VKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 484 IFN--WAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 541
+ + EE + + L V + + LH Q IHRD+K +ILL D R K
Sbjct: 117 VTHTRMNEEQIA--------AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 165
Query: 542 VADFGLV----RLAPEGKGSIETRIAGTFGYLAPE 572
++DFG + P K + GT ++APE
Sbjct: 166 LSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPE 195
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 368 PSSEPGDI---QMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHD-GTKIA 423
P EP + Q A +V+ R+ +NF + +G G G V + G +A
Sbjct: 4 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVA 60
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
VK+M+ + L +E+ ++ +H ++V + L G+E +V E++ G L+
Sbjct: 61 VKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 484 IFN--WAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 541
+ + EE + + L V + + LH Q IHRD+K +ILL D R K
Sbjct: 119 VTHTRMNEEQIA--------AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 167
Query: 542 VADFGLV----RLAPEGKGSIETRIAGTFGYLAPE 572
++DFG + P K + GT ++APE
Sbjct: 168 LSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPE 197
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTK 449
++++ + ILG GG V+ +L +AVK + A + F+ E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 450 VRHRHLVALL----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
+ H +VA+ G +V EY+ G R I + EG P+ R + +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHT--EG--PMTPKRAIEVIA 123
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIET-RIA 563
D + + + H IHRD+KP+NI++ KV DFG+ R +A G +T +
Sbjct: 124 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 564 GTFGYLAPEYA 574
GT YL+PE A
Sbjct: 181 GTAQYLSPEQA 191
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G +GTV+K + + +I A+KR+ + EI +L +++H+++V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL-HD 68
Query: 462 CLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
L ++KL LVFE+ Q + F+ L P E + L +G+ + H +
Sbjct: 69 VLHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDP-EIVKSFLFQL--LKGLGFCHS---R 120
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ +HRDLKP N+L+ + K+ADFGL R
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V E M G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + ++HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVK--RMEAGVISGKGLT-EFKSEIAVLTK 449
T+ + +G G +GTVYK + H G +A+K R+ G G GL E+A+L +
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 450 VR---HRHLVALLGHC----LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
+ H ++V L+ C D K+ LVFE++ Q L ++ GL P E + L
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGL-PAETIKDL 125
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETR 561
RG+++LH +HRDLKP NIL+ K+ADFGL R+ T
Sbjct: 126 MRQF--LRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTP 178
Query: 562 IAGTFGYLAPE 572
+ T Y APE
Sbjct: 179 VVVTLWYRAPE 189
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 22/190 (11%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVK--RMEAGVISGKGLTEFKSEIAVLTKV 450
T+ + +G G +GTVYK + H G +A+K R+ G G ++ + E+A+L ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGE-EGLPISTVR-EVALLRRL 60
Query: 451 R---HRHLVALLGHC----LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT 502
H ++V L+ C D K+ LVFE++ Q L ++ GL P E + L
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGL-PAETIKDLM 118
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 562
RG+++LH +HRDLKP NIL+ K+ADFGL R+ +
Sbjct: 119 RQF--LRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--V 171
Query: 563 AGTFGYLAPE 572
T Y APE
Sbjct: 172 VVTLWYRAPE 181
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVK--RMEAGVISGKGLTEFKSEIAVLTKV 450
T+ + +G G +GTVYK + H G +A+K R+ G G ++ + E+A+L ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGE-EGLPISTVR-EVALLRRL 60
Query: 451 R---HRHLVALLGHC----LDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT 502
H ++V L+ C D K+ LVFE++ Q L ++ GL P E + L
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGL-PAETIKDLM 118
Query: 503 IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 562
RG+++LH +HRDLKP NIL+ K+ADFGL R+ + +++ +
Sbjct: 119 RQF--LRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALDP-V 171
Query: 563 AGTFGYLAPE 572
T Y APE
Sbjct: 172 VVTLWYRAPE 181
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 400 ENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL 455
E ++G G FG V G L K +A+K +++G + K +F SE +++ + H ++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNV 70
Query: 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH 515
+ L G +++ E+M G+L + + + + + +A G++YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFL----RQNDGQFTVIQLVGMLRGIAAGMKYL- 125
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550
A +++HR L NIL+ ++ KV+DFGL R
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRF 158
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 395 NNFSEENILGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
NN LG G FG V + G+ K+AVK +++ + + SE+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMS 104
Query: 449 KV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLS-----------RHIFNWAEEGLKPLE 496
+ +H ++V LLG C G L++ EY G L + +N + + L
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 497 WNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
L + VA+G+ +L A ++ IHRD+ N+LL + AK+ DFGL R
Sbjct: 165 SRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 364 THTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKI 422
HT S ++ +L+A S V +V + + +G G +G V G ++
Sbjct: 28 AHTAASVAAKNLALLKAR----SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQV 83
Query: 423 AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSR 482
A+K++ E+ +L +H +++A+ K ++ +P G
Sbjct: 84 AIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKS 134
Query: 483 H--IFNWAEEGL-------KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 533
+ + E L +PL + RG++Y+H IHRDLKPSN+L
Sbjct: 135 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLL 191
Query: 534 LGDDMRAKVADFGLVR---LAPEGKGSIETRIAGTFGYLAPE 572
+ ++ K+ DFG+ R +P T T Y APE
Sbjct: 192 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 368 PSSEPGDI---QMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTK-IA 423
P EP + Q A +V+ R+ +NF + +G G G V + K +A
Sbjct: 124 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVA 180
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
VK+M+ + L +E+ ++ +H ++V + L G+E +V E++ G L+
Sbjct: 181 VKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 484 IFNWA--EEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 541
+ + EE + + L V + + LH Q IHRD+K +ILL D R K
Sbjct: 239 VTHTRMNEEQIA--------AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 287
Query: 542 VADFGLV----RLAPEGKGSIETRIAGTFGYLAPE 572
++DFG + P K + GT ++APE
Sbjct: 288 LSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPE 317
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 403 LGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G G V E H G ++AVK M+ + L +E+ ++ +H ++V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKS 110
Query: 462 CLDGNEKLLVFEYMPQGTLSRHI--FNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAH 519
L G E ++ E++ G L+ + EE + T+ V + + YLH
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA--------TVCEAVLQALAYLHA--- 159
Query: 520 QSFIHRDLKPSNILLGDDMRAKVADFGLV----RLAPEGKGSIETRIAGTFGYLAPE 572
Q IHRD+K +ILL D R K++DFG + P+ K + GT ++APE
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX-----LVGTPYWMAPE 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLT-EFKSEIAVLTK 449
++++ + ILG GG V+ +L +AVK + A + F+ E
Sbjct: 26 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 450 VRHRHLVALL----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
+ H +VA+ G +V EY+ G R I + EG P+ R + +
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHT--EG--PMTPKRAIEVIA 140
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIET-RIA 563
D + + + H IHRD+KP+NI++ KV DFG+ R +A G +T +
Sbjct: 141 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 564 GTFGYLAPEYA 574
GT YL+PE A
Sbjct: 198 GTAQYLSPEQA 208
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 364 THTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKI 422
HT S ++ +L+A S V +V + + +G G +G V G ++
Sbjct: 27 AHTAASVAAKNLALLKAR----SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQV 82
Query: 423 AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS- 481
A+K++ E+ +L +H +++A+ K ++ +P G
Sbjct: 83 AIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKS 133
Query: 482 -RHIFNWAEEGL-------KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 533
+ + E L +PL + RG++Y+H IHRDLKPSN+L
Sbjct: 134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLL 190
Query: 534 LGDDMRAKVADFGLVR---LAPEGKGSIETRIAGTFGYLAPE 572
+ ++ K+ DFG+ R +P T T Y APE
Sbjct: 191 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ L + A G+ PL + L +G+ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGI-PLPLIKSYLFQL--LQGLAF 121
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 122 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
+ F +LG+G FG V+ + G+ A+K ++ + + K E +L +V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +V L + L+ +++ G L F + + E + + +A ++A
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELALA 139
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLA 570
+++LH L I+RDLKP NILL ++ K+ DFGL + + + + + GT Y+A
Sbjct: 140 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMA 195
Query: 571 PEYAGNFGSS 580
PE G +
Sbjct: 196 PEVVNRRGHT 205
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
+ F +LG+G FG V+ + G+ A+K ++ + + K E +L +V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +V L + L+ +++ G L F + + E + + +A ++A
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELALA 138
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLA 570
+++LH L I+RDLKP NILL ++ K+ DFGL + + + + + GT Y+A
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMA 194
Query: 571 PEYAGNFGSS 580
PE G +
Sbjct: 195 PEVVNRRGHT 204
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
+ F +LG+G FG V+ + G+ A+K ++ + + K E +L +V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +V L + L+ +++ G L F + + E + + +A ++A
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELALA 138
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLA 570
+++LH L I+RDLKP NILL ++ K+ DFGL + + + + + GT Y+A
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMA 194
Query: 571 PEYAGNFGSS 580
PE G +
Sbjct: 195 PEVVNRRGHT 204
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 402 ILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+LG+G FG V K + + AVK + K + E+ +L K+ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
D + +V E G L I K + I V G+ Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KH 140
Query: 521 SFIHRDLKPSNILLGD---DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ +HRDLKP NILL D K+ DFGL + ++ RI GT Y+APE
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE 193
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
NF + +G G +G VYK G +A+K++ + + EI++L ++ H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++V LL N+ LVFE++ L + A G+ PL + L +G+ +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGI-PLPLIKSYLFQL--LQGLAF 120
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
H +HRDLKP N+L+ + K+ADFGL R
Sbjct: 121 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 76/189 (40%), Gaps = 32/189 (16%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL---------TI 503
LV L D + +V EY P G + H+ RR+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--------------RRIGRFSEPHARFY 146
Query: 504 ALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIA 563
A + EYLH L I+RDLKP N+++ KV DFG LA KG +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFG---LAKRVKGRT-WXLC 199
Query: 564 GTFGYLAPE 572
GT YLAPE
Sbjct: 200 GTPEYLAPE 208
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 387 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTE-FKSEI 444
++ +R +F ++GRG FG V +L + K+ A+K + + + T F+ E
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 445 AVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR----R 500
VL + + L D N LV +Y G L + + E P E R
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAE 183
Query: 501 LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG-LVRLAPEGKGSIE 559
+ IA+D V LH ++HRD+KP NIL+ + ++ADFG ++L + G+++
Sbjct: 184 MVIAID---SVHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED--GTVQ 232
Query: 560 TRIA-GTFGYLAPE 572
+ +A GT Y++PE
Sbjct: 233 SSVAVGTPDYISPE 246
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 368 PSSEPGDI---QMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHD-GTKIA 423
P EP + Q A +V+ R+ +NF + +G G G V + G +A
Sbjct: 47 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVA 103
Query: 424 VKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH 483
VK+M+ + L +E+ ++ +H ++V + L G+E +V E++ G L+
Sbjct: 104 VKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 484 IFN--WAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 541
+ + EE + + L V + + LH Q IHRD+K +ILL D R K
Sbjct: 162 VTHTRMNEEQIA--------AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 210
Query: 542 VADFGLV----RLAPEGKGSIETRIAGTFGYLAPE 572
++DFG + P K + GT ++APE
Sbjct: 211 LSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPE 240
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V ++ G KIAVK++ S E+ +
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT---- 502
L ++H +++ LL D E L H+ L + ++LT
Sbjct: 104 LKHMKHENVIGLL----DVFTPATSLEEFNDVYLVTHLMG---ADLNNIVKCQKLTDDHV 156
Query: 503 --IALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIE 559
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G +
Sbjct: 157 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 213
Query: 560 TRIAGTFGYLAPEYAGNF 577
TR Y APE N+
Sbjct: 214 TR-----WYRAPEIMLNW 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R A E G + TR Y APE
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 576 NF 577
N+
Sbjct: 203 NW 204
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R A E G + TR Y APE
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 576 NF 577
N+
Sbjct: 203 NW 204
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R A E G + TR Y APE
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 576 NF 577
N+
Sbjct: 203 NW 204
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 21/184 (11%)
Query: 403 LGRGGFGTVYKGELHDGTK---IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
+GRG +G VYK + DG A+K++E IS EIA+L +++H ++++L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC----REIALLRELKHPNVISLQ 84
Query: 460 GHCLDGNEK--LLVFEYMPQGTLSRHIFNWAEEG-LKPLEWNRRLTIAL--DVARGVEYL 514
L ++ L+F+Y F+ A + KP++ R + +L + G+ YL
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 515 HGLAHQSFIHRDLKPSNILL----GDDMRAKVADFGLVRL--APEGKGSIETRIAGTFGY 568
H +HRDLKP+NIL+ + R K+AD G RL +P + + TF Y
Sbjct: 145 HA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 569 LAPE 572
APE
Sbjct: 202 RAPE 205
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG- 460
+G G +G V + G K+A+K++ S E+ +L +RH +++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 461 ----HCLDG-NEKLLVFEYM--PQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
LD + LV +M G L +H + L +R + + +G+ Y
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKH---------EKLGEDRIQFLVYQMLKGLRY 143
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPE 572
+H IHRDLKP N+ + +D K+ DFGL R A E G + TR Y APE
Sbjct: 144 IHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPE 195
Query: 573 YAGNF 577
N+
Sbjct: 196 VILNW 200
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + E + R A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAA-QIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + E + R A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAA-QIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + E + R A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAA-QIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 29/174 (16%)
Query: 396 NFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
F EE LG FG VYKG L +A+K ++ G EF+ E + +
Sbjct: 29 RFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRAR 85
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIF--------------NWAEEGLKPL 495
++H ++V LLG ++F Y G L + + L+P
Sbjct: 86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 496 EWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
++ + + +A G+EYL + +H+DL N+L+ D + K++D GL R
Sbjct: 146 DF---VHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 394 TNNFSEENILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR 451
++N+ + LG+G F V + +H G + A K + +S + + + E + K++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 452 HRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
H ++V L + + LVF+ + G L I A E + + + L+ +
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILE---SI 141
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTFGY 568
Y H +HR+LKP N+LL + K+ADFGL + + AGT GY
Sbjct: 142 AYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGY 196
Query: 569 LAPE 572
L+PE
Sbjct: 197 LSPE 200
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 441 KSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
++EI +L K+ H ++ + + D + +V E M G L + N+R
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVG-----------NKR 110
Query: 501 LTIA------LDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLA 551
L A + V+YLH IHRDLKP N+LL +D K+ DFG ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
G+ S+ + GT YLAPE + G++
Sbjct: 168 --GETSLMRTLCGTPTYLAPEVLVSVGTA 194
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 441 KSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
++EI +L K+ H ++ + + D + +V E M G L + N+R
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVG-----------NKR 110
Query: 501 LTIA------LDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLA 551
L A + V+YLH IHRDLKP N+LL +D K+ DFG ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
G+ S+ + GT YLAPE + G++
Sbjct: 168 --GETSLMRTLCGTPTYLAPEVLVSVGTA 194
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY P G + H+ + E + R A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFXEPHARFYAA-QIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ KV DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 396 NFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
F EE LG FG VYKG L +A+K ++ G EF+ E + +
Sbjct: 12 RFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRAR 68
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRH-IFNWAEEGLKPLEWNRRLTIALD-- 506
++H ++V LLG ++F Y G L + + + +R + AL+
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 507 --------VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+A G+EYL + +H+DL N+L+ D + K++D GL R
Sbjct: 129 DFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 441 KSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
++EI +L K+ H ++ + + D + +V E M G L + N+R
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVG-----------NKR 110
Query: 501 LTIA------LDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLA 551
L A + V+YLH IHRDLKP N+LL +D K+ DFG ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
G+ S+ + GT YLAPE + G++
Sbjct: 168 --GETSLMRTLCGTPTYLAPEVLVSVGTA 194
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 13/189 (6%)
Query: 395 NNFSEENILGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
+F + LG G +G V+K DG AVKR + K +E+ KV
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
L + L + + +L +H W + W L +A +
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA----H 172
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG-LVRLAPEGKGSIETRIAGTFGYLAPE 572
LH Q +H D+KP+NI LG R K+ DFG LV L G G ++ G Y+APE
Sbjct: 173 LHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPE 226
Query: 573 -YAGNFGSS 580
G++G++
Sbjct: 227 LLQGSYGTA 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 394 TNNFSEENILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
++F E +LG+G FG V K D A+K++ + + L+ SE+ +L + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNH 61
Query: 453 RHLVALLGHCLDGN----------EKLLVF---EYMPQGTLSRHIFNWAEEGLKPLEWNR 499
+++V L+ +K +F EY GTL I + + W
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR- 120
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + + Y+H Q IHRDLKP NI + + K+ DFGL +
Sbjct: 121 ---LFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 441 KSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
++EI +L K+ H ++ + + D + +V E M G L + N+R
Sbjct: 62 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVG-----------NKR 109
Query: 501 LTIA------LDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLA 551
L A + V+YLH IHRDLKP N+LL +D K+ DFG ++
Sbjct: 110 LKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
Query: 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
G+ S+ + GT YLAPE + G++
Sbjct: 167 --GETSLMRTLCGTPTYLAPEVLVSVGTA 193
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 24/178 (13%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKRM----EAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
+G G +G V+K D G +A+K+ + VI L EI +L +++H +LV
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL----REIRMLKQLKHPNLVN 66
Query: 458 LLGHCLDGNEKLLVFEYMPQGTL---SRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
LL LVFEY L R+ E +K + W + V +
Sbjct: 67 LLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFC 118
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H + IHRD+KP NIL+ K+ DFG RL + +A T Y +PE
Sbjct: 119 HK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPE 172
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 441 KSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
++EI +L K+ H ++ + + D + +V E M G L + N+R
Sbjct: 69 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVG-----------NKR 116
Query: 501 LTIA------LDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLA 551
L A + V+YLH IHRDLKP N+LL +D K+ DFG ++
Sbjct: 117 LKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173
Query: 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
G+ S+ + GT YLAPE + G++
Sbjct: 174 --GETSLMRTLCGTPTYLAPEVLVSVGTA 200
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 394 TNNFSEENILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR 451
++N+ + LG+G F V + +H G + A K + +S + + + E + K++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 452 HRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
H ++V L + + LVF+ + G L I A E + + + L+ +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILE---SI 118
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTFGY 568
Y H +HR+LKP N+LL + K+ADFGL + + AGT GY
Sbjct: 119 AYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGY 173
Query: 569 LAPE 572
L+PE
Sbjct: 174 LSPE 177
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 381 GNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELH--DGTKIAVKRMEAGVISGKGLT 438
GN + S + N+ + +G+G F V K H G ++AVK ++ ++ L
Sbjct: 1 GNSITSATDEQPHIGNYRLQKTIGKGNFAKV-KLARHVLTGREVAVKIIDKTQLNPTSLQ 59
Query: 439 EFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW--AEEGLKPLE 496
+ E+ ++ + H ++V L LV EY G +F++ A +K E
Sbjct: 60 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG----EVFDYLVAHGRMKEKE 115
Query: 497 WNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG 556
+ + V+Y H + +HRDLK N+LL DM K+ADFG G
Sbjct: 116 ARAKFR---QIVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG-N 168
Query: 557 SIETRIAGTFGYLAPE 572
++T G+ Y APE
Sbjct: 169 KLDT-FCGSPPYAAPE 183
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 394 TNNFSEENILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR 451
++N+ + LG+G F V + +H G + A K + +S + + + E + K++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 452 HRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
H ++V L + + LVF+ + G L I A E + + + L+ +
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILE---SI 117
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTFGY 568
Y H +HR+LKP N+LL + K+ADFGL + + AGT GY
Sbjct: 118 AYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGY 172
Query: 569 LAPE 572
L+PE
Sbjct: 173 LSPE 176
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 402 ILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+LG+G FG V K + + AVK + K + E+ +L K+ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
D + +V E G L I K + I V G+ Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHK---H 140
Query: 521 SFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ +HRDLKP NILL D K+ DFGL + ++ RI GT Y+APE
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE 193
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 402 ILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+LG+G FG V K + + AVK + K + E+ +L K+ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
D + +V E G L I K + I V G+ Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHK---H 140
Query: 521 SFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ +HRDLKP NILL D K+ DFGL + ++ RI GT Y+APE
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE 193
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 18/186 (9%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG- 460
+GRG F TVYKG + ++A ++ ++ FK E L ++H ++V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 461 --HCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLE-WNRRLTIALDVARGVEYLHG 516
+ G + + LV E GTL ++ + +K L W R+ + +G+++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFLHT 147
Query: 517 LAHQSFIHRDLKPSNILL-GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE-YA 574
IHRDLK NI + G K+ D GL L + S + GT + APE Y
Sbjct: 148 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFXAPEXYE 203
Query: 575 GNFGSS 580
+ S
Sbjct: 204 EKYDES 209
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY P G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ KV DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 394 TNNFSEENILGRGGFGTVYKGELHD--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR 451
++N+ + LG+G F V + +H G + A K + +S + + + E + K++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 452 HRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
H ++V L + + LVF+ + G L I A E + + + L+ +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILE---SI 118
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTFGY 568
Y H +HR+LKP N+LL + K+ADFGL + + AGT GY
Sbjct: 119 AYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGY 173
Query: 569 LAPE 572
L+PE
Sbjct: 174 LSPE 177
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 441 KSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
++EI +L K+ H ++ + + D + +V E M G L + N+R
Sbjct: 202 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVG-----------NKR 249
Query: 501 LTIA------LDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLA 551
L A + V+YLH IHRDLKP N+LL +D K+ DFG ++
Sbjct: 250 LKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 306
Query: 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
G+ S+ + GT YLAPE + G++
Sbjct: 307 --GETSLMRTLCGTPTYLAPEVLVSVGTA 333
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 400 ENILGRGGFGT-VYKGELHDGTKIAVKRM-----EAGVISGKGLTEFKSEIAVL----TK 449
E ILG G GT V++G G +AVKRM + ++ K LTE V+ ++
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSE 78
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
R L L C + L+ + N ++E LK + +++ +A
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESK------------NVSDENLKLQKEYNPISLLRQIAS 126
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILL-------------GDDMRAKVADFGLVRLAPEGKG 556
GV +LH L IHRDLKP NIL+ +++R ++DFGL + G+
Sbjct: 127 GVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 557 SIETRI---AGTFGYLAPE 572
+ +GT G+ APE
Sbjct: 184 XFRXNLNNPSGTSGWRAPE 202
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 396 NFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
N+ +G+G F V + G ++AVK ++ ++ L + E+ ++ + H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW--AEEGLKPLEWNRRLTIALDVARGVE 512
+V L LV EY G +F++ A +K E + + V+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG----EVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 513 YLHGLAHQSFI-HRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
Y HQ FI HRDLK N+LL DM K+ADFG G ++T G+ Y AP
Sbjct: 128 Y----CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT-FCGSPPYAAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 396 NFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
N+ +G+G F V + G ++AVK ++ ++ L + E+ ++ + H +
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIF--NWAEEGLKPLEWNRRLTIALDVARGVE 512
+V L LV EY G + ++ W +E ++ + + V+
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ-------IVSAVQ 120
Query: 513 YLHGLAHQSFI-HRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
Y HQ FI HRDLK N+LL DM K+ADFG G ++T G+ Y AP
Sbjct: 121 Y----CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT-FCGSPPYAAP 174
Query: 572 E 572
E
Sbjct: 175 E 175
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 441 KSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
++EI +L K+ H ++ + + D + +V E M G L + N+R
Sbjct: 188 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVG-----------NKR 235
Query: 501 LTIA------LDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLA 551
L A + V+YLH IHRDLKP N+LL +D K+ DFG ++
Sbjct: 236 LKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292
Query: 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580
G+ S+ + GT YLAPE + G++
Sbjct: 293 --GETSLMRTLCGTPTYLAPEVLVSVGTA 319
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY P G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ +V DFG LA KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIQVTDFG---LAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 396 NFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
N+ +G+G F V + G ++AVK ++ ++ L + E+ ++ + H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW--AEEGLKPLEWNRRLTIALDVARGVE 512
+V L LV EY G +F++ A +K E + + V+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG----EVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 513 YLHGLAHQSFI-HRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
Y HQ FI HRDLK N+LL DM K+ADFG G ++T G+ Y AP
Sbjct: 128 Y----CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT-FCGSPPYAAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 28/204 (13%)
Query: 376 QMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISG 434
Q A +V+ R+ +NF + +G G G V + G +AVK+M+
Sbjct: 4 QFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR 60
Query: 435 KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFN--WAEEGL 492
+ L +E+ ++ +H ++V + L G+E +V E++ G L+ + + EE +
Sbjct: 61 REL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI 118
Query: 493 KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV---- 548
+ L V + + LH Q IHRD+K +ILL D R K++DFG
Sbjct: 119 A--------AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167
Query: 549 RLAPEGKGSIETRIAGTFGYLAPE 572
+ P K + GT ++APE
Sbjct: 168 KEVPRRKX-----LVGTPYWMAPE 186
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G +GTV+K + + +I A+KR+ + EI +L +++H+++V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL-HD 68
Query: 462 CLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
L ++KL LVFE+ Q + F+ L P E + L +G+ + H +
Sbjct: 69 VLHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDP-EIVKSFLFQL--LKGLGFCHS---R 120
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ +HRDLKP N+L+ + K+A+FGL R
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 11/174 (6%)
Query: 403 LGRGGFGTVY-KGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG G FG V+ E G + +K + S + + ++EI VL + H +++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
D + +V E G L I + G K L + + + Y H Q
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARG-KALSEGYVAELMKQMMNALAYFHS---QH 144
Query: 522 FIHRDLKPSNILLGD---DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+H+DLKP NIL D K+ DFGL L + S T AGT Y+APE
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPE 196
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
N S + ++G G FG V G L +K +A+K ++ G + K +F E +++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQF 103
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L G ++V E M G+L + + + + + +A G
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASG 159
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR-LAPEGKGSIETR 561
++YL + +HRDL NIL+ ++ KV+DFGL R L + + + TR
Sbjct: 160 MKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 400 ENILGRGGFGT-VYKGELHDGTKIAVKRM-----EAGVISGKGLTEFKSEIAVL----TK 449
E ILG G GT V++G G +AVKRM + ++ K LTE V+ ++
Sbjct: 38 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSE 96
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
R L L C + L+ + N ++E LK + +++ +A
Sbjct: 97 TTDRFLYIALELCNLNLQDLVESK------------NVSDENLKLQKEYNPISLLRQIAS 144
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILL-------------GDDMRAKVADFGLVRLAPEGKG 556
GV +LH L IHRDLKP NIL+ +++R ++DFGL + G+
Sbjct: 145 GVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 557 SIETRI---AGTFGYLAPE 572
+ +GT G+ APE
Sbjct: 202 XFRXNLNNPSGTSGWRAPE 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 396 NFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
N+ +G+G F V + G ++AVK ++ ++ L + E+ ++ + H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW--AEEGLKPLEWNRRLTIALDVARGVE 512
+V L LV EY G +F++ A +K E + + V+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG----EVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 513 YLHGLAHQSFI-HRDLKPSNILLGDDMRAKVADFGL 547
Y HQ FI HRDLK N+LL DM K+ADFG
Sbjct: 128 Y----CHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + E + R A + E
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAA-QIVLTFE 148
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 149 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 201
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 396 NFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
N+ +G+G F V + G ++A+K ++ ++ L + E+ ++ + H +
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW--AEEGLKPLEWNRRLTIALDVARGVE 512
+V L L+ EY G +F++ A +K E + + V+
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGG----EVFDYLVAHGRMKEKEARSKFR---QIVSAVQ 125
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
Y H + +HRDLK N+LL DM K+ADFG G G ++T G+ Y APE
Sbjct: 126 YCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDT-FCGSPPYAAPE 180
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 400 ENILGRGGFGT-VYKGELHDGTKIAVKRM-----EAGVISGKGLTEFKSEIAVL----TK 449
E ILG G GT V++G G +AVKRM + ++ K LTE V+ ++
Sbjct: 38 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSE 96
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
R L L C + L+ + N ++E LK + +++ +A
Sbjct: 97 TTDRFLYIALELCNLNLQDLVESK------------NVSDENLKLQKEYNPISLLRQIAS 144
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILL-------------GDDMRAKVADFGLVRLAPEGKG 556
GV +LH L IHRDLKP NIL+ +++R ++DFGL + G+
Sbjct: 145 GVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 557 SIETRI---AGTFGYLAPE 572
+ +GT G+ APE
Sbjct: 202 XFRXNLNNPSGTSGWRAPE 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
R+ +NF + +G G G V + G +AVK+M+ + L +E+ ++
Sbjct: 23 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRD 77
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFN--WAEEGLKPLEWNRRLTIALDV 507
+H ++V + L G+E +V E++ G L+ + + EE + + L V
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA--------AVCLAV 129
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV----RLAPEGKGSIETRIA 563
+ + LH Q IHRD+K +ILL D R K++DFG + P K +
Sbjct: 130 LQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LV 181
Query: 564 GTFGYLAPE 572
GT ++APE
Sbjct: 182 GTPYWMAPE 190
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 102/260 (39%), Gaps = 46/260 (17%)
Query: 332 MVIHPRHSGSENSESVKITVA---GSNVSVGAISETHTVPSSEPGDIQMLEAGNMVISIQ 388
M +H + SE + VKI V V I++ + + S+ N S++
Sbjct: 1 MSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSK--------VDNQFYSVE 52
Query: 389 V---LRNVTNNFSEENILGRGGFGTV---YKGELHDGTKIAVKRMEAGVISGKGLTEFKS 442
V V + +G G G V Y L +A+K++ +
Sbjct: 53 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR 110
Query: 443 EIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT 502
E+ ++ V H+++++LL VF PQ TL + L + +
Sbjct: 111 ELVLMKCVNHKNIISLLN----------VF--TPQKTLEEFQDVYLVMELMDANLCQVIQ 158
Query: 503 IALDVAR----------GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552
+ LD R G+++LH IHRDLKPSNI++ D K+ DFGL R A
Sbjct: 159 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA- 214
Query: 553 EGKGSIETRIAGTFGYLAPE 572
G + T T Y APE
Sbjct: 215 -GTSFMMTPYVVTRYYRAPE 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LG+G F V + ++ G + A K + +S + + + E + ++H ++V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ- 520
+ L+F+ + G L I A E + + + L+ LH HQ
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAV-----LH--CHQM 140
Query: 521 SFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRDLKP N+LL ++ K+ADFGL + EG+ AGT GYL+PE
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE 194
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 447 LTKVRHRHLVALLG------HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR 500
L ++H +++ LL + N+ LV M G +I A+ +++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQF--- 125
Query: 501 LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIE 559
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G +
Sbjct: 126 --LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 560 TRIAGTFGYLAPEYAGNF 577
TR Y APE N+
Sbjct: 181 TR-----WYRAPEIMLNW 193
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG + KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 394 TNNFSEENILGRGGFGTVYKGELHDGTK-IAVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
T+++ LG+G F V + T+ A K + +S + + + E + ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
++V L + LVF+ + G L E + E+ + + + +E
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELF--------EDIVAREYYSEADASHCIHQILE 141
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
++ + +HRDLKP N+LL + K+ADFGL + +G+ AGT GYL
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYL 200
Query: 570 APE 572
+PE
Sbjct: 201 SPE 203
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ E + R A + E
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAA-QIVLTFE 148
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 149 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 201
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG + KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 149 ---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 200
Query: 576 NF 577
N+
Sbjct: 201 NW 202
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 167 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIML 218
Query: 576 NF 577
N+
Sbjct: 219 NW 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPAFVAPE 187
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLG 460
+G GG V++ A+K + + L +++EIA L K++ ++ L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ + +V E G + + + ++ + P W R+ +E +H +
Sbjct: 80 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDP--WERKSYWK----NMLEAVHTIHQH 130
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
+H DLKP+N L+ D M K+ DFG+ ++ P+ ++ GT Y+ PE + S
Sbjct: 131 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 580 S 580
S
Sbjct: 190 S 190
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 102/260 (39%), Gaps = 46/260 (17%)
Query: 332 MVIHPRHSGSENSESVKITVA---GSNVSVGAISETHTVPSSEPGDIQMLEAGNMVISIQ 388
M +H + SE + VKI V V I++ + + S+ N S++
Sbjct: 1 MSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSK--------VDNQFYSVE 52
Query: 389 V---LRNVTNNFSEENILGRGGFGTV---YKGELHDGTKIAVKRMEAGVISGKGLTEFKS 442
V V + +G G G V Y L +A+K++ +
Sbjct: 53 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR 110
Query: 443 EIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT 502
E+ ++ V H+++++LL VF PQ TL + L + +
Sbjct: 111 ELVLMKCVNHKNIISLLN----------VF--TPQKTLEEFQDVYLVMELMDANLCQVIQ 158
Query: 503 IALDVAR----------GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552
+ LD R G+++LH IHRDLKPSNI++ D K+ DFGL R A
Sbjct: 159 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA- 214
Query: 553 EGKGSIETRIAGTFGYLAPE 572
G + T T Y APE
Sbjct: 215 -GTSFMMTPYVVTRYYRAPE 233
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT------IALDVARGVEYLH 515
D E L H+ L + +++LT + + RG++Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMG---ADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYA 574
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIM 194
Query: 575 GNF 577
N+
Sbjct: 195 LNW 197
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 124
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 125 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 181
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 182 R-----WYRAPEIMLNW 193
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
L L D + +V EY P G + H+ + E + R A + E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFXEPHARF-YAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ KV DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 396 NFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
N+ +G+G F V + G ++AV+ ++ ++ L + E+ ++ + H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW--AEEGLKPLEWNRRLTIALDVARGVE 512
+V L LV EY G +F++ A +K E + + V+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG----EVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 513 YLHGLAHQSFI-HRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
Y HQ FI HRDLK N+LL DM K+ADFG G E G+ Y AP
Sbjct: 128 Y----CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE--FCGSPPYAAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 146 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 197
Query: 576 NF 577
N+
Sbjct: 198 NW 199
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 384 VISIQVLRNVTNNFSEEN-------ILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGK 435
V+ + L+ V + EE LGRG FG V++ E G + AVK++ V +
Sbjct: 75 VLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE 134
Query: 436 GLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPL 495
L A LT R +V L G +G + E + G+L + + E+G P
Sbjct: 135 ELMA----CAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPE 184
Query: 496 EWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG-LVRLAPE 553
+R L G+EYLH + +H D+K N+LL D A + DFG V L P+
Sbjct: 185 --DRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 239
Query: 554 GKG-SIET--RIAGTFGYLAPE 572
G G S+ T I GT ++APE
Sbjct: 240 GLGKSLLTGDYIPGTETHMAPE 261
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 125
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 126 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 182
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 183 R-----WYRAPEIMLNW 194
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 130
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 131 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 187
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 188 R-----WYRAPEIMLNW 199
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY P G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 23/183 (12%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT------IALDVARGVEYLH 515
D E L H+ L + ++LT + + RG++Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMG---ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYA 574
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 575 GNF 577
N+
Sbjct: 195 LNW 197
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 396 NFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
N+ +G+G F V + G ++AV+ ++ ++ L + E+ ++ + H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW--AEEGLKPLEWNRRLTIALDVARGVE 512
+V L LV EY G +F++ A +K E + + V+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG----EVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 513 YLHGLAHQSFI-HRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
Y HQ FI HRDLK N+LL DM K+ADFG G ++T G+ Y AP
Sbjct: 128 Y----CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT-FCGSPPYAAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 140
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 141 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 197
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 198 R-----WYRAPEIMLNW 209
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
++T+ + +G+G F V + +L G + A K + +S + + + E + +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
+H ++V L + LVF+ + G L I A E + + + L+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAV-- 116
Query: 511 VEYLHGLAHQ-SFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTF 566
LH HQ +HRDLKP N+LL + K+ADFGL + +G AGT
Sbjct: 117 ---LH--CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTP 170
Query: 567 GYLAPE 572
GYL+PE
Sbjct: 171 GYLSPE 176
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ E + R A + E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAA-QIVLTFE 176
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG + KG + GT YLAPE
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 126
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 127 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 183
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 184 R-----WYRAPEIMLNW 195
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 23/183 (12%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT------IALDVARGVEYLH 515
D E L H+ L + ++LT + + RG++Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMG---ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 516 GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYA 574
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 575 GNF 577
N+
Sbjct: 195 LNW 197
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 149 ---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 200
Query: 576 NF 577
N+
Sbjct: 201 NW 202
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 149 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 200
Query: 576 NF 577
N+
Sbjct: 201 NW 202
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ E + R A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARF-YAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 143 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 194
Query: 576 NF 577
N+
Sbjct: 195 NW 196
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 202
Query: 576 NF 577
N+
Sbjct: 203 NW 204
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 149 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 200
Query: 576 NF 577
N+
Sbjct: 201 NW 202
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G K+A+K++ S E+ +L ++H +++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 460 ----GHCLDGNEKLLVFEYMPQGTLSRHI-FNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+ + LV +M Q L + + ++EE ++ L + + +G++Y+
Sbjct: 92 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKFSEEKIQYLVYQ--------MLKGLKYI 142
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+ + +D K+ DFGL R A E G + TR Y APE
Sbjct: 143 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPE 193
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 148
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 149 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVAT 205
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 206 R-----WYRAPEIMLNW 217
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+P G + H+ + A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 146 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 197
Query: 576 NF 577
N+
Sbjct: 198 NW 199
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKIAVKRME-AGVISGKGLT--EFKSEIAVLTKVRHRHLV 456
++G+G F V + G + AVK ++ A S GL+ + K E ++ ++H H+V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV-EYLH 515
LL +VFE+M L I A+ G E +A R + E L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE-----AVASHYMRQILEALR 144
Query: 516 GLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ IHRD+KP N+LL + K+ DFG+ E G + GT ++APE
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES-GLVAGGRVGTPHFMAPE 203
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 72/180 (40%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
L L D + +V EY P G + H+ + A + E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ KV DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 124
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 125 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 181
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 182 R-----WYRAPEIMLNW 193
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 28/202 (13%)
Query: 384 VISIQVLRNVTNNFSEEN-------ILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGK 435
V+ + L+ V + EE LGRG FG V++ E G + AVK++ V +
Sbjct: 56 VLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE 115
Query: 436 GLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPL 495
L A LT R +V L G +G + E + G+L + + E+G P
Sbjct: 116 ELMA----CAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPE 165
Query: 496 EWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG-LVRLAPE 553
+R L G+EYLH + +H D+K N+LL D A + DFG V L P+
Sbjct: 166 --DRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 220
Query: 554 GKGS---IETRIAGTFGYLAPE 572
G G I GT ++APE
Sbjct: 221 GLGKDLLTGDYIPGTETHMAPE 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 156 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 207
Query: 576 NF 577
N+
Sbjct: 208 NW 209
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLG 460
+G GG V++ A+K + + L +++EIA L K++ ++ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ + +V E G + + + ++ + P W R+ +E +H +
Sbjct: 96 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDP--WERKSYWK----NMLEAVHTIHQH 146
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
+H DLKP+N L+ D M K+ DFG+ ++ P+ ++ GT Y+ PE + S
Sbjct: 147 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 580 S 580
S
Sbjct: 206 S 206
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 156 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 207
Query: 576 NF 577
N+
Sbjct: 208 NW 209
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 125
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 126 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 182
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 183 R-----WYRAPEIMLNW 194
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 201
Query: 576 NF 577
N+
Sbjct: 202 NW 203
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 155 ---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 206
Query: 576 NF 577
N+
Sbjct: 207 NW 208
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY P G + H+ + A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ KV DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 139
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 140 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 196
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 197 R-----WYRAPEIMLNW 208
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E + V
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY P G + H+ + A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ KVADFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 154 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 205
Query: 576 NF 577
N+
Sbjct: 206 NW 207
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G K+A+K++ S E+ +L ++H +++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 460 ----GHCLDGNEKLLVFEYMPQGTLSRHI-FNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+ + LV +M Q L + + ++EE ++ L + + +G++Y+
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFSEEKIQYLVYQ--------MLKGLKYI 160
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPE 572
H +HRDLKP N+ + +D K+ DFGL R A E G + TR Y APE
Sbjct: 161 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPE 211
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 151
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 152 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 208
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 209 R-----WYRAPEIMLNW 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 147
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 148 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 204
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 205 R-----WYRAPEIMLNW 216
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 403 LGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALL 459
+G GG V++ L++ +I A+K + + L +++EIA L K++ ++ L
Sbjct: 64 IGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 460 GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAH 519
+ + +V E G + + + ++ + P W R+ +E +H +
Sbjct: 123 DYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDP--WERKSYWK----NMLEAVHTIHQ 173
Query: 520 QSFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578
+H DLKP+N L+ D M K+ DFG+ ++ P+ ++ GT Y+ PE +
Sbjct: 174 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 579 SS 580
SS
Sbjct: 233 SS 234
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 148
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 149 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 205
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 206 R-----WYRAPEIMLNW 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 72/180 (40%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
L L D + +V EY P G + H+ + A + E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ KV DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + LG G G V K + I +++ I + E+ VL + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + E P E +++IA V RG+ YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRIPEEILGKVSIA--VLRGLAYL 130
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
HQ +HRD+KPSNIL+ K+ DFG ++ + S+ GT Y+APE
Sbjct: 131 RE-KHQ-IMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMAPE 183
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 201
Query: 576 NF 577
N+
Sbjct: 202 NW 203
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 147
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 148 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 204
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 205 R-----WYRAPEIMLNW 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 148
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 149 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 205
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 206 R-----WYRAPEIMLNW 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 146 ---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 197
Query: 576 NF 577
N+
Sbjct: 198 NW 199
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLG 460
+G GG V++ A+K + + L +++EIA L K++ ++ L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ + +V E G + + + ++ + P W R+ +E +H +
Sbjct: 76 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDP--WERKSYWK----NMLEAVHTIHQH 126
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
+H DLKP+N L+ D M K+ DFG+ ++ P+ ++ GT Y+ PE + S
Sbjct: 127 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 580 S 580
S
Sbjct: 186 S 186
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 79
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--CQHLSNDHICYFLYQI 137
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 566 FGYLAPE 572
Y APE
Sbjct: 195 RWYRAPE 201
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ E + R A + E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARF-YAAQIVLTFE 176
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG+ T + GT YLAPE
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGATWT-LCGTPEYLAPE 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 201
Query: 576 NF 577
N+
Sbjct: 202 NW 203
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 423 AVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSR 482
A+K + +S ++ E+AVL + H +++ L D LV E G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 483 HIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMR 539
I + +K E + + I V GV YLH + +HRDLKP N+LL D
Sbjct: 126 EIIH----RMKFNEVDAAVIIK-QVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDAL 177
Query: 540 AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
K+ DFGL + E + ++ R+ GT Y+APE
Sbjct: 178 IKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE 208
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 388 QVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
+ + V + + +G G +G+V + G ++AVK++ S E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 447 LTKVRHRHLVALL-----GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
L ++H +++ LL L+ + + ++ L+ + + L +
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQ 124
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIET 560
+ + RG++Y+H IHRDLKPSN+ + +D K+ DFGL R E G + T
Sbjct: 125 FLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVAT 181
Query: 561 RIAGTFGYLAPEYAGNF 577
R Y APE N+
Sbjct: 182 R-----WYRAPEIMLNW 193
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 N 576
N
Sbjct: 196 N 196
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 77
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 135
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 136 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 566 FGYLAPE 572
Y APE
Sbjct: 193 RWYRAPE 199
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLG 460
+G GG V++ A+K + + L +++EIA L K++ ++ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ + +V E G + + + ++ + P W R+ +E +H +
Sbjct: 96 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDP--WERKSYWK----NMLEAVHTIHQH 146
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
+H DLKP+N L+ D M K+ DFG+ ++ P+ ++ GT Y+ PE + S
Sbjct: 147 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 580 S 580
S
Sbjct: 206 S 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 5/174 (2%)
Query: 403 LGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G +G K DG + K ++ G ++ SE+ +L +++H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 462 CLDGNEKLL--VFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLHGLA 518
+D L V EY G L+ I +E E+ R+ L +A +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ +HRDLKP+N+ L K+ DFGL R+ +T GT Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYYMSPE 186
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLG 460
+G GG V++ A+K + + L +++EIA L K++ ++ L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ + ++ M G + + + ++ + P W R+ +E +H +
Sbjct: 77 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WERKSYWK----NMLEAVHTIHQH 127
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
+H DLKP+N L+ D M K+ DFG+ ++ P+ ++ GT Y+ PE + S
Sbjct: 128 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 580 S 580
S
Sbjct: 187 S 187
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
++T+ + LG+G F V + ++ G + A K + +S + + + E + +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
+H ++V L + LVF+ + G L E + E+ + + +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELF--------EDIVAREYYSEADASHCIQQI 112
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTFG 567
+E ++ +HRDLKP N+LL + K+ADFGL + +G AGT G
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 568 YLAPE 572
YL+PE
Sbjct: 172 YLSPE 176
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 83
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 141
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 142 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 566 FGYLAPE 572
Y APE
Sbjct: 199 RWYRAPE 205
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 75
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 133
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 134 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 566 FGYLAPE 572
Y APE
Sbjct: 191 RWYRAPE 197
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DFGL R E G + TR Y APE
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 201
Query: 576 NF 577
N+
Sbjct: 202 NW 203
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 75
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 133
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 134 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 566 FGYLAPE 572
Y APE
Sbjct: 191 RWYRAPE 197
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 394 TNNFSEENILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
++F E +LG+G FG V K D A+K++ + + L+ SE+ +L + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNH 61
Query: 453 RHLVALLGHCLDGN----------EKLLVF---EYMPQGTLSRHIFNWAEEGLKPLEWNR 499
+++V L+ +K +F EY TL I + + W
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR- 120
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + + Y+H Q IHRDLKP NI + + K+ DFGL +
Sbjct: 121 ---LFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 80
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 138
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 139 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 566 FGYLAPE 572
Y APE
Sbjct: 196 RWYRAPE 202
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 81
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 139
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 140 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 566 FGYLAPE 572
Y APE
Sbjct: 197 RWYRAPE 203
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 72
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 130
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 131 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 566 FGYLAPE 572
Y APE
Sbjct: 188 RWYRAPE 194
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 79
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 137
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 566 FGYLAPE 572
Y APE
Sbjct: 195 RWYRAPE 201
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 395 NNFSEENILGRGGFGTVY---KGELHDGTKI-AVKRMEAGVISGKGLT--EFKSEIAVLT 448
NF +LG G +G V+ K HD K+ A+K ++ I K T ++E VL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 449 KVRHRHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+R + L + KL L+ +Y+ G L H+ + + E ++ + ++
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVG-EI 168
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFG 567
+E+LH L I+RD+K NILL + + DFGL + + GT
Sbjct: 169 VLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 568 YLAPE 572
Y+AP+
Sbjct: 226 YMAPD 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 73
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 131
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 132 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 566 FGYLAPE 572
Y APE
Sbjct: 189 RWYRAPE 195
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 403 LGRGGFGTV---YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
+G G +G+V Y L K+AVK++ S E+ +L ++H +++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 460 G------HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
D +E LV M G +I + L + + RG++Y
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVK-----CQALSDEHVQFLVYQLLRGLKY 138
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG-KGSIETRIAGTFGYLAPE 572
+H IHRDLKPSN+ + +D ++ DFGL R A E G + TR Y APE
Sbjct: 139 IHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPE 190
Query: 573 YAGNF 577
N+
Sbjct: 191 IMLNW 195
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 79
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 137
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 566 FGYLAPE 572
Y APE
Sbjct: 195 RWYRAPE 201
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 95
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 153
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 154 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 566 FGYLAPE 572
Y APE
Sbjct: 211 RWYRAPE 217
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 75
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 133
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 134 LRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 566 FGYLAPE 572
Y APE
Sbjct: 191 RWYRAPE 197
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 73
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 131
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 132 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 566 FGYLAPE 572
Y APE
Sbjct: 189 RWYRAPE 195
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 28/197 (14%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
R V + +G+G +G V++G H G +AVK + S + + E + V
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLWH-GESVAVK-----IFSSRDEQSWFRETEIYNTV 57
Query: 451 --RHRHLVALLGHCL----DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA 504
RH +++ + + + L+ Y G+L + + L+P + L +A
Sbjct: 58 LLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEP---HLALRLA 111
Query: 505 LDVARGVEYLH-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
+ A G+ +LH + HRD K N+L+ +++ +AD GL + +G ++
Sbjct: 112 VSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLD 171
Query: 560 T----RIAGTFGYLAPE 572
R+ GT Y+APE
Sbjct: 172 IGNNPRV-GTKRYMAPE 187
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 362 SETHTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELH---- 417
+E + P ++P +I+ E + + R + E+ LG G FGTV KG
Sbjct: 3 TEVYESPYADPEEIRPKE-------VYLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKV 53
Query: 418 -DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMP 476
+ + + EA + K E +E V+ ++ + ++V ++G C + +LV E
Sbjct: 54 VKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAE 110
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRR------LTIALDVARGVEYLHGLAHQSFIHRDLKPS 530
G L+++ L+ NR + + V+ G++YL +F+HRDL
Sbjct: 111 LGPLNKY-----------LQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAAR 156
Query: 531 NILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGTFGYLAPE 572
N+LL AK++DFGL + A E +T + APE
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 362 SETHTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELH---- 417
+E + P ++P +I+ E + + R + E+ LG G FGTV KG
Sbjct: 3 TEVYESPYADPEEIRPKE-------VYLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKV 53
Query: 418 -DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMP 476
+ + + EA + K E +E V+ ++ + ++V ++G C + +LV E
Sbjct: 54 VKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAE 110
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRR------LTIALDVARGVEYLHGLAHQSFIHRDLKPS 530
G L+++ L+ NR + + V+ G++YL +F+HRDL
Sbjct: 111 LGPLNKY-----------LQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAAR 156
Query: 531 NILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGTFGYLAPE 572
N+LL AK++DFGL + A E +T + APE
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
++T+ + LG+G F V + ++ G + A K + +S + + + E + +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
+H ++V L + LVF+ + G L E + E+ + + +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELF--------EDIVAREYYSEADASHCIQQI 112
Query: 511 VEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTFG 567
+E ++ +HRDLKP N+LL + K+ADFGL + +G AGT G
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 568 YLAPE 572
YL+PE
Sbjct: 172 YLSPE 176
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 75
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 133
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 134 LRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 566 FGYLAPE 572
Y APE
Sbjct: 191 RWYRAPE 197
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 124
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 125 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 176
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 177 FGTPEFVAPE 186
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 124
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 125 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 176
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 177 FGTPEFVAPE 186
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 403 LGRGGFGTVYKGELHDGTK---IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
LG G FG+V +G K +A+K ++ G E E ++ ++ + ++V L+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 460 GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAH 519
G C +LV E G L + + EE + + + V+ G++YL
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVSMGMKYLE---E 128
Query: 520 QSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF--GYLAPE 572
++F+HRDL N+LL + AK++DFGL + R AG + + APE
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 15/195 (7%)
Query: 381 GNMVISIQVLRNVTNNFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTE 439
GN + S + N+ +G+G F V + G ++A+K ++ ++ L +
Sbjct: 1 GNSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK 60
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW--AEEGLKPLEW 497
E+ ++ + H ++V L L+ EY G +F++ A +K E
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG----EVFDYLVAHGRMKEKEA 116
Query: 498 NRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS 557
+ + V+Y H + +HRDLK N+LL DM K+ADFG G G
Sbjct: 117 RSKFR---QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GK 169
Query: 558 IETRIAGTFGYLAPE 572
++ G Y APE
Sbjct: 170 LDA-FCGAPPYAAPE 183
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 28/199 (14%)
Query: 389 VLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
V R V + +G+G +G V++G G +AVK + S + + E +
Sbjct: 31 VQRTVARQITLLECVGKGRYGEVWRGSWQ-GENVAVK-----IFSSRDEKSWFRETELYN 84
Query: 449 KV--RHRHLVALLGHCL----DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT 502
V RH +++ + + + L+ Y G+L ++ L L+ L
Sbjct: 85 TVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLR 138
Query: 503 IALDVARGVEYLH-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS 557
I L +A G+ +LH + HRDLK NIL+ + + +AD GL + +
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 558 IET----RIAGTFGYLAPE 572
++ R+ GT Y+APE
Sbjct: 199 LDVGNNPRV-GTKRYMAPE 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ D+GL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 399 EENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
E+ LG G FGTV KG + + + EA + K E +E V+ ++ +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 72
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDV 507
++V ++G C + +LV E G L+++ L+ NR + + V
Sbjct: 73 YIVRMIGIC-EAESWMLVMEMAELGPLNKY-----------LQQNRHVKDKNIIELVHQV 120
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGT 565
+ G++YL +F+HRDL N+LL AK++DFGL + A E +T
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 566 FGYLAPE 572
+ APE
Sbjct: 178 VKWYAPE 184
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIK----IL 79
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 137
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 566 FGYLAPE 572
Y APE
Sbjct: 195 RWYRAPE 201
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 403 LGRGGFGTV---YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
+G G +G+V Y L K+AVK++ S E+ +L ++H +++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 460 G------HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
D +E LV M G +I + L + + RG++Y
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVK-----CQALSDEHVQFLVYQLLRGLKY 146
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG-KGSIETRIAGTFGYLAPE 572
+H IHRDLKPSN+ + +D ++ DFGL R A E G + TR Y APE
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPE 198
Query: 573 YAGNF 577
N+
Sbjct: 199 IMLNW 203
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLG 460
+G GG V++ A+K + + L +++EIA L K++ ++ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ + ++ M G + + + ++ + P W R+ +E +H +
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WERKSYWK----NMLEAVHTIHQH 174
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
+H DLKP+N L+ D M K+ DFG+ ++ P+ ++ GT Y+ PE + S
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 580 S 580
S
Sbjct: 234 S 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 382 NMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTE- 439
+V +Q+ R +F ++GRG FG V ++ + +I A+K + + + T
Sbjct: 80 QLVKEMQLHRE---DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETAC 136
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
F+ E VL + + AL D N LV +Y G L + + + K E
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED---KLPEDMA 193
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
R I ++ ++ +H L ++HRD+KP N+LL + ++ADFG L G+++
Sbjct: 194 RFYIG-EMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQ 248
Query: 560 TRIA-GTFGYLAPE 572
+ +A GT Y++PE
Sbjct: 249 SSVAVGTPDYISPE 262
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 399 EENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
E+ LG G FGTV KG + + + EA + K E +E V+ ++ +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 72
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDV 507
++V ++G C + +LV E G L+++ L+ NR + + V
Sbjct: 73 YIVRMIGIC-EAESWMLVMEMAELGPLNKY-----------LQQNRHVKDKNIIELVHQV 120
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGT 565
+ G++YL +F+HRDL N+LL AK++DFGL + A E +T
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 566 FGYLAPE 572
+ APE
Sbjct: 178 VKWYAPE 184
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKR-MEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+G+G FG V+K G K+A+K+ + G +T + EI +L ++H ++V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIE 84
Query: 461 HCLDGNEKL--------LVFEYMPQ---GTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
C LVF++ G LS + + +K R + + L+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQMLLN--- 136
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TF 566
G+ Y+H +HRD+K +N+L+ D K+ADFGL R K S R T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 567 GYLAPE 572
Y PE
Sbjct: 194 WYRPPE 199
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 399 EENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
E+ LG G FGTV KG + + + EA + K E +E V+ ++ +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 68
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDV 507
++V ++G C + +LV E G L+++ L+ NR + + V
Sbjct: 69 YIVRMIGIC-EAESWMLVMEMAELGPLNKY-----------LQQNRHVKDKNIIELVHQV 116
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGT 565
+ G++YL +F+HRDL N+LL AK++DFGL + A E +T
Sbjct: 117 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 566 FGYLAPE 572
+ APE
Sbjct: 174 VKWYAPE 180
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 403 LGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G +G K DG + K ++ G ++ SE+ +L +++H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 462 CLDGNEKLL--VFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLHGLA 518
+D L V EY G L+ I +E E+ R+ L +A +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ +HRDLKP+N+ L K+ DFGL R+ S GT Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPE 186
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 382 NMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTE- 439
+V +Q+ R +F ++GRG FG V ++ + +I A+K + + + T
Sbjct: 64 QLVKEMQLHRE---DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETAC 120
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
F+ E VL + + AL D N LV +Y G L + + + K E
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED---KLPEDMA 177
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
R I ++ ++ +H L ++HRD+KP N+LL + ++ADFG L G+++
Sbjct: 178 RFYIG-EMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQ 232
Query: 560 TRIA-GTFGYLAPE 572
+ +A GT Y++PE
Sbjct: 233 SSVAVGTPDYISPE 246
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 77/189 (40%), Gaps = 32/189 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL---------TI 503
LV L D + +V EY+ G + H+ RR+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--------------RRIGRFSEPHARFY 146
Query: 504 ALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIA 563
A + EYLH L I+RDLKP N+L+ +V DFG A KG +A
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLA 199
Query: 564 GTFGYLAPE 572
GT YLAPE
Sbjct: 200 GTPEYLAPE 208
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 399 EENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
E+ LG G FGTV KG + + + EA + K E +E V+ ++ +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 66
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDV 507
++V ++G C + +LV E G L+++ L+ NR + + V
Sbjct: 67 YIVRMIGIC-EAESWMLVMEMAELGPLNKY-----------LQQNRHVKDKNIIELVHQV 114
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGT 565
+ G++YL +F+HRDL N+LL AK++DFGL + A E +T
Sbjct: 115 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 566 FGYLAPE 572
+ APE
Sbjct: 172 VKWYAPE 178
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 75
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 133
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 134 LRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 566 FGYLAPE 572
Y APE
Sbjct: 191 RWYRAPE 197
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 365 HTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELH-----DG 419
H P ++P +I+ E + + R + E+ LG G FGTV KG
Sbjct: 4 HESPYADPEEIRPKE-------VYLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKVVKT 54
Query: 420 TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGT 479
+ + + EA + K E +E V+ ++ + ++V ++G C + +LV E G
Sbjct: 55 VAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGP 111
Query: 480 LSRHIFNWAEEGLKPLEWNRR------LTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 533
L+++ L+ NR + + V+ G++YL +F+HRDL N+L
Sbjct: 112 LNKY-----------LQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 157
Query: 534 LGDDMRAKVADFGLVRL--APEGKGSIETRIAGTFGYLAPE 572
L AK++DFGL + A E +T + APE
Sbjct: 158 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELHDGT------KIAVKRMEAGVISGKGLTEFKSEIA 445
+V +++ LG G F V K GT K KR + G E + E+
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCR-QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 446 VLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIAL 505
+L ++RH +++ L + + +L+ E + G L F +E L E + L L
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD--FLAEKESLTEDEATQFLKQIL 125
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETR 561
D GV YLH + H DLKP NI+L D + R K+ DFG+ G
Sbjct: 126 D---GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KN 177
Query: 562 IAGTFGYLAPE 572
I GT ++APE
Sbjct: 178 IFGTPEFVAPE 188
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 399 EENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
E+ LG G FGTV KG + + + EA + K E +E V+ ++ +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 78
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDV 507
++V ++G C + +LV E G L+++ L+ NR + + V
Sbjct: 79 YIVRMIGIC-EAESWMLVMEMAELGPLNKY-----------LQQNRHVKDKNIIELVHQV 126
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGT 565
+ G++YL +F+HRDL N+LL AK++DFGL + A E +T
Sbjct: 127 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 566 FGYLAPE 572
+ APE
Sbjct: 184 VKWYAPE 190
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 28/197 (14%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
R V + + +G+G +G V++G G +AVK + S + + E + V
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQ-GENVAVK-----IFSSRDEKSWFRETELYNTV 57
Query: 451 --RHRHLVALLGHCL----DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA 504
RH +++ + + + L+ Y G+L ++ L L+ L I
Sbjct: 58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIV 111
Query: 505 LDVARGVEYLH-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
L +A G+ +LH + HRDLK NIL+ + + +AD GL + + ++
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD 171
Query: 560 T----RIAGTFGYLAPE 572
R+ GT Y+APE
Sbjct: 172 VGNNPRV-GTKRYMAPE 187
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A++++ E + L E K +L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIK----IL 79
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 137
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 566 FGYLAPE 572
Y APE
Sbjct: 195 RWYRAPE 201
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 77
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 135
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 136 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 566 FGYLAPE 572
Y APE
Sbjct: 193 RWYRAPE 199
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 30/188 (15%)
Query: 397 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKS-EIAVLTKVRHRHL 455
++ ++G G FG V++ +L + ++A+K+ V+ K FK+ E+ ++ V+H ++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKK----VLQDK---RFKNRELQIMRIVKHPNV 94
Query: 456 VALLGHCLDGNEKL------LVFEYMPQGTLSRHIFNWAE-EGLKPLEWNRRLTIAL--- 505
V L +K LV EY+P+ T+ R ++A+ + P+ L I L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPM-----LLIKLYMY 148
Query: 506 DVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA-KVADFGLVRLAPEGKGSIETRIAG 564
+ R + Y+H + HRD+KP N+LL K+ DFG ++ G+ ++ + I
Sbjct: 149 QLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV-SXICS 204
Query: 565 TFGYLAPE 572
+ Y APE
Sbjct: 205 RY-YRAPE 211
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKR-MEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+G+G FG V+K G K+A+K+ + G +T + EI +L ++H ++V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIE 84
Query: 461 HCLDGNEKL--------LVFEYMPQ---GTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
C LVF++ G LS + + +K R + + L+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQMLLN--- 136
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TF 566
G+ Y+H +HRD+K +N+L+ D K+ADFGL R K S R T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 567 GYLAPE 572
Y PE
Sbjct: 194 WYRPPE 199
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 403 LGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
+G G +G K DG + K ++ G ++ SE+ +L +++H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 462 CLDGNEKLL--VFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLHGLA 518
+D L V EY G L+ I +E E+ R+ L +A +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ +HRDLKP+N+ L K+ DFGL R+ + GT Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE-DFAKEFVGTPYYMSPE 186
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 28/197 (14%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
R V + + +G+G +G V++G G +AVK + S + + E + V
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRGSWQ-GENVAVK-----IFSSRDEKSWFRETELYNTV 57
Query: 451 --RHRHLVALLGHCL----DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA 504
RH +++ + + + L+ Y G+L ++ L L+ L I
Sbjct: 58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIV 111
Query: 505 LDVARGVEYLH-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE 559
L +A G+ +LH + HRDLK NIL+ + + +AD GL + + ++
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD 171
Query: 560 T----RIAGTFGYLAPE 572
R+ GT Y+APE
Sbjct: 172 VGNNPRV-GTKRYMAPE 187
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN----------VF--TPQKTLE 99
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSN 156
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 403 LGRGGFGTV---YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
+G G +G+V Y L K+AVK++ S E+ +L ++H +++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 460 G------HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
D +E LV M G +I + +++ + + RG++Y
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQF-----LVYQLLRGLKY 146
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG-KGSIETRIAGTFGYLAPE 572
+H IHRDLKPSN+ + +D ++ DFGL R A E G + TR Y APE
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPE 198
Query: 573 YAGNF 577
N+
Sbjct: 199 IMLNW 203
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN----------VF--TPQKTLE 99
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG ++ + S+ GT Y++PE
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG ++ + S+ GT Y++PE
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG ++ + S+ GT Y++PE
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG ++ + S+ GT Y++PE
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G F V K L K KR G E + E+++L +V H +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L + + +L+ E + G L F +E L E + LD GV YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILD---GVNYLHT- 133
Query: 518 AHQSFIHRDLKPSNILLGDDM----RAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAPE 572
+ H DLKP NI+L D K+ DFG LA E + +E + I GT ++APE
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIFGTPEFVAPE 188
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKR-MEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+G+G FG V+K G K+A+K+ + G +T + EI +L ++H ++V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIE 84
Query: 461 HCLDGNEKL--------LVFEYMPQ---GTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
C LVF++ G LS + + +K R + + L+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQMLLN--- 136
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TF 566
G+ Y+H +HRD+K +N+L+ D K+ADFGL R K S R T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 567 GYLAPE 572
Y PE
Sbjct: 194 WYRPPE 199
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G F V K L K KR G E + E+++L +V H +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L + + +L+ E + G L F +E L E + LD GV YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILD---GVNYLHT- 133
Query: 518 AHQSFIHRDLKPSNILLGDDM----RAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAPE 572
+ H DLKP NI+L D K+ DFG LA E + +E + I GT ++APE
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIFGTPEFVAPE 188
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 399 EENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR 453
E+ LG G FGTV KG + + + EA + K E +E V+ ++ +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 430
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDV 507
++V ++G C + +LV E G L+++ L+ NR + + V
Sbjct: 431 YIVRMIGIC-EAESWMLVMEMAELGPLNKY-----------LQQNRHVKDKNIIELVHQV 478
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGT 565
+ G++YL +F+HRDL N+LL AK++DFGL + A E +T
Sbjct: 479 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 566 FGYLAPE 572
+ APE
Sbjct: 536 VKWYAPE 542
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVY-KGELHDGTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 95
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGL---KPLEWNRRLTIA 504
+ RH +++ + + + E M L H+ L + L +
Sbjct: 96 LRFRHENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRI 562
+ RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T
Sbjct: 151 YQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 563 AGTFGYLAPE 572
T Y APE
Sbjct: 208 VATRWYRAPE 217
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 403 LGRGGFGTVYKGELHD-GTKIAVKR-MEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+G+G FG V+K G K+A+K+ + G +T + EI +L ++H ++V L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIE 83
Query: 461 HCLDGNEKL--------LVFEYMPQ---GTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
C LVF++ G LS + + +K R + + L+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQMLLN--- 135
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG---TF 566
G+ Y+H +HRD+K +N+L+ D K+ADFGL R K S R T
Sbjct: 136 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 567 GYLAPE 572
Y PE
Sbjct: 193 WYRPPE 198
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G F V K L K KR G E + E+++L +V H +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L + + +L+ E + G L F +E L E + LD GV YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILD---GVNYLHT- 133
Query: 518 AHQSFIHRDLKPSNILLGDDM----RAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAPE 572
+ H DLKP NI+L D K+ DFG LA E + +E + I GT ++APE
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIFGTPEFVAPE 188
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRM--EAGVISGKGLTEFKSEIAVLTKVRH 452
+F ++GRG + V L +I R+ + V + + ++E V + +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 453 RHLVALLGHCLDGNEKLL-VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
+ L C +L V EY+ G L +F+ + P E R + + +A +
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA--L 166
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR--LAPEGKGSIETRIAGTFGYL 569
YLH + I+RDLK N+LL + K+ D+G+ + L P G + GT Y+
Sbjct: 167 NYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSTFCGTPNYI 220
Query: 570 APE 572
APE
Sbjct: 221 APE 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 69/182 (37%), Gaps = 33/182 (18%)
Query: 403 LGRGGFGTVYKGELHD------GTKIAVKRMEAGV---ISGKGLTEFKSEIAVLTKVRHR 453
LG G F K +H KI KRMEA I+ L E I L +V H
Sbjct: 19 LGEGSFSICRKC-VHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHD 77
Query: 454 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
L LV E + G L I + K I + V +
Sbjct: 78 QL-----------HTFLVMELLNGGELFERI-----KKKKHFSETEASYIMRKLVSAVSH 121
Query: 514 LHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLA 570
+H + +HRDLKP N+L D++ K+ DFG RL P ++T T Y A
Sbjct: 122 MHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP-CFTLHYAA 177
Query: 571 PE 572
PE
Sbjct: 178 PE 179
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G F V K L K KR G E + E+++L +V H +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L + + +L+ E + G L F +E L E + LD GV YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILD---GVNYLHT- 133
Query: 518 AHQSFIHRDLKPSNILLGDDM----RAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAPE 572
+ H DLKP NI+L D K+ DFG LA E + +E + I GT ++APE
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIFGTPEFVAPE 188
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 362 SETHTVPSSEPGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELH---- 417
+E + P ++P +I+ E + + R + E+ LG G FGTV KG
Sbjct: 346 TEVYESPYADPEEIRPKE-------VYLDRKLLT--LEDKELGSGNFGTVKKGYYQMKKV 396
Query: 418 -DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMP 476
+ + + EA + K E +E V+ ++ + ++V ++G C + +LV E
Sbjct: 397 VKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAE 453
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRR------LTIALDVARGVEYLHGLAHQSFIHRDLKPS 530
G L+++ L+ NR + + V+ G++YL +F+HRDL
Sbjct: 454 LGPLNKY-----------LQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAAR 499
Query: 531 NILLGDDMRAKVADFGLVRL--APEGKGSIETRIAGTFGYLAPE 572
N+LL AK++DFGL + A E +T + APE
Sbjct: 500 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG ++ + S+ GT Y++PE
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELHDGTK---IAVK---RMEAGVISGKGLTEFKSEIA 445
+ + + +++G G +G V E +D + +A+K R+ +I K + EIA
Sbjct: 50 QIPDRYEIRHLIGTGSYGHV--CEAYDKLEKRVVAIKKILRVFEDLIDCKRILR---EIA 104
Query: 446 VLTKVRHRHLVALLGHCLDG-----NEKLLVFEYMPQG--TLSRHIFNWAEEGLKPLEWN 498
+L ++ H H+V +L + +E +V E L R E +K L +N
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYN 164
Query: 499 RRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ GV+Y+H +HRDLKP+N L+ D KV DFGL R
Sbjct: 165 --------LLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 182
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG ++ + S+ GT Y++PE
Sbjct: 183 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPE 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 77/183 (42%), Gaps = 20/183 (10%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRH---IFNWAEEGLKPLEWNRRLTIALDVAR 509
LV L D + +V EY+ G + H I +AE + A +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHAR--------FYAAQIVL 152
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
EYLH L I+RDLKP N+L+ +V DFG A KG + GT YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYL 205
Query: 570 APE 572
APE
Sbjct: 206 APE 208
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN----------VF--TPQKTLE 99
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 77/189 (40%), Gaps = 32/189 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL---------TI 503
LV L D + +V EY+ G + H+ RR+
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--------------RRIGRFSEPHARFY 133
Query: 504 ALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIA 563
A + EYLH L I+RDLKP N+L+ + +V DFG A KG +
Sbjct: 134 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFG---FAKRVKGRT-WXLC 186
Query: 564 GTFGYLAPE 572
GT YLAPE
Sbjct: 187 GTPEYLAPE 195
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTVYKGELHDGT------KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G F V K GT K KR + G E + E+ +L ++RH +++
Sbjct: 13 LGSGQFAIVRKCR-QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L + + +L+ E + G L F +E L E + L LD GV YLH
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFD--FLAEKESLTEDEATQFLKQILD---GVHYLHS 126
Query: 517 LAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ H DLKP NI+L D + R K+ DFG+ G I GT ++APE
Sbjct: 127 ---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPE 181
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 379 EAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGL 437
+ G + I Q + N+ +G G G V+K G IAVK+M +
Sbjct: 9 QTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK 68
Query: 438 TEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEW 497
VL ++V G + + + E M GT + + + G P
Sbjct: 69 RILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQ-GPIPERI 125
Query: 498 NRRLTIALDVARGVEYL---HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPE 553
++T+A + + + YL HG+ IHRD+KPSNILL + + K+ DFG+ RL +
Sbjct: 126 LGKMTVA--IVKALYYLKEKHGV-----IHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178
Query: 554 GKGSIETRIAGTFGYLAPE 572
+ R AG Y+APE
Sbjct: 179 ---KAKDRSAGCAAYMAPE 194
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G F V K L K KR G E + E+++L +V H +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L + + +L+ E + G L F +E L E + LD GV YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILD---GVNYLHT- 133
Query: 518 AHQSFIHRDLKPSNILLGDDM----RAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAPE 572
+ H DLKP NI+L D K+ DFG LA E + +E + I GT ++APE
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIFGTPEFVAPE 188
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK----IL 77
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 135
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGS-IETRIAGT 565
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A P+ + T T
Sbjct: 136 LRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 566 FGYLAPE 572
Y APE
Sbjct: 193 RWYRAPE 199
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + E + R A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF-YAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 7/171 (4%)
Query: 403 LGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LGRG +G V K + G +AVKR+ A V S + + V V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
+ + E M +L + ++G + + + IA+ + + +E+LH + S
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKG-QTIPEDILGKIAVSIVKALEHLH--SKLS 174
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KPSN+L+ + K+ DFG+ + +T AG Y+APE
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--KTIDAGCKPYMAPE 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 139
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG ++ + S+ GT Y++PE
Sbjct: 140 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPE 192
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 394 TNNFSEENILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
++F E +LG+G FG V K D A+K++ + + L+ SE+ +L + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVXLLASLNH 61
Query: 453 RHLVALLGHCLDGN----------EKLLVF---EYMPQGTLSRHIFNWAEEGLKPLEWNR 499
+++V L+ +K +F EY TL I + + W
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR- 120
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + + Y+H Q IHR+LKP NI + + K+ DFGL +
Sbjct: 121 ---LFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 99
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSN 156
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + E + R A + E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF-YAAQIVLTFE 176
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG + KG + GT YLAPE
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 79
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 137
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP---EGKGSIETRIAG 564
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A + G + +A
Sbjct: 138 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA- 193
Query: 565 TFGYLAPE 572
T Y APE
Sbjct: 194 TRWYRAPE 201
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRM---EAGVISGKGLTEFKSEIAVL 447
+V ++ + +G G +G V + + ++A+K++ E + L E K +L
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK----IL 80
Query: 448 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+ RH +++ + + + Y+ Q + ++ + + L + +
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQI 138
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP---EGKGSIETRIAG 564
RG++Y+H + +HRDLKPSN+LL K+ DFGL R+A + G + +A
Sbjct: 139 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA- 194
Query: 565 TFGYLAPE 572
T Y APE
Sbjct: 195 TRWYRAPE 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 27/194 (13%)
Query: 390 LRNVTNNFSEENILGRGGFGTVY--KGELHDGTKIAVKRME-AGVISGKGLTEFKSEIAV 446
+ +++ + LG G +G V K +L G + A+K ++ + V + E+AV
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS-----RHIFNWAEEGLKPLEWNRRL 501
L ++ H +++ L D LV E G L R F+ + +
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV--------- 125
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSI 558
I V G YLH + +HRDLKP N+LL D K+ DFGL G G +
Sbjct: 126 -IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKM 180
Query: 559 ETRIAGTFGYLAPE 572
+ R+ GT Y+APE
Sbjct: 181 KERL-GTAYYIAPE 193
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + E + R A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF-YAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + E + R A + E
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF-YAAQIVLTFE 150
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 151 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 203
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 99
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 157 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + E + R A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF-YAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 92
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 93 EFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSN 149
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 150 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 188
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 98
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 99 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 155
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 156 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 194
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 100
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 101 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 157
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 158 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 196
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 392 NVTNNFSEENILGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAV 446
NV + + LG G F V K L K KR G + + E+++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L +++H +++ L + + +L+ E + G L F +E L E L L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD--FLAEKESLTEEEATEFLKQILN 125
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRI 562
GV YLH L H DLKP NI+L D R K+ DFGL G I
Sbjct: 126 ---GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 563 AGTFGYLAPE 572
GT ++APE
Sbjct: 178 FGTPEFVAPE 187
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 147
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG ++ + S+ GT Y++PE
Sbjct: 148 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPE 200
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 99
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 157 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISG-KGLTEFKSEIAVLTKVRH 452
+F ++GRG + V L +I A+K ++ +++ + + ++E V + +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 453 RHLVALLGHCLDGNEKLL-VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
+ L C +L V EY+ G L +F+ + P E R + + +A +
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA--L 134
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR--LAPEGKGSIETRIAGTFGYL 569
YLH + I+RDLK N+LL + K+ D+G+ + L P G + GT Y+
Sbjct: 135 NYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSXFCGTPNYI 188
Query: 570 APE 572
APE
Sbjct: 189 APE 191
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 100
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 101 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 157
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 158 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 196
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 389 VLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEF--KSEIAV 446
V R + + +G+G FG V++G+ G ++AVK + S + + ++EI
Sbjct: 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQ 89
Query: 447 LTKVRHRHLVALLGHCLDGN----EKLLVFEYMPQGTLSRHI--FNWAEEGLKPLEWNRR 500
+RH +++ + N + LV +Y G+L ++ + EG+
Sbjct: 90 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-------- 141
Query: 501 LTIALDVARGVEYLH-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK 555
+ +AL A G+ +LH + HRDLK NIL+ + +AD GL
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 201
Query: 556 GSIE---TRIAGTFGYLAPE 572
+I+ GT Y+APE
Sbjct: 202 DTIDIAPNHRVGTKRYMAPE 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ DF L R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 394 TNNFSEENILGRGGFGTVY--KGELHDGTKIAVKRMEAGVISGKGLTE-FKSEIAVLTKV 450
++ + + +LG+G FG V K ++ G + AVK + + K E E+ +L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARG 510
H +++ L D LV E G L I + + ++ R I V G
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAAR---IIRQVLSG 138
Query: 511 VEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFG 567
+ Y+H +HRDLKP N+LL D ++ DFGL E ++ +I GT
Sbjct: 139 ITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKMKDKI-GTAY 193
Query: 568 YLAPE 572
Y+APE
Sbjct: 194 YIAPE 198
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTVYK------GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
LG G F V K G+ + I +R+ + G E + E+ +L ++RH +++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSR-RGVSREEIEREVNILREIRHPNII 92
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L + + +L+ E + G L F +E L E + L LD GV YLH
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFD--FLAEKESLTEDEATQFLKQILD---GVHYLHS 147
Query: 517 LAHQSFIHRDLKPSNILLGD----DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ H DLKP NI+L D + R K+ DFG+ G I GT ++APE
Sbjct: 148 ---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPE 202
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 93
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 94 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 150
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 151 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 189
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 93
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 94 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 150
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 151 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 189
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 16/148 (10%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRME---AGVISGKGLTEFKSEIAVLTK 449
T F E +G G FG+V+K + DG A+KR + AG + + AVL +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA---LD 506
H H+V + + L+ EY G+L+ I E + + + + + L
Sbjct: 68 --HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQ 121
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILL 534
V RG+ Y+H + S +H D+KPSNI +
Sbjct: 122 VGRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISG-KGLTEFKSEIAVLTKVRH 452
+F ++GRG + V L +I A+K ++ +++ + + ++E V + +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 453 RHLVALLGHCLDGNEKLL-VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
+ L C +L V EY+ G L +F+ + P E R + + +A +
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA--L 119
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR--LAPEGKGSIETRIAGTFGYL 569
YLH + I+RDLK N+LL + K+ D+G+ + L P G + GT Y+
Sbjct: 120 NYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSXFCGTPNYI 173
Query: 570 APE 572
APE
Sbjct: 174 APE 176
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 16/148 (10%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRME---AGVISGKGLTEFKSEIAVLTK 449
T F E +G G FG+V+K + DG A+KR + AG + + AVL +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA---LD 506
H H+V + + L+ EY G+L+ I E + + + + + L
Sbjct: 70 --HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQ 123
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILL 534
V RG+ Y+H + S +H D+KPSNI +
Sbjct: 124 VGRGLRYIHSM---SLVHMDIKPSNIFI 148
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS 481
+A+K++ + E+ ++ V H+++++LL VF PQ TL
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN----------VF--TPQKTLE 92
Query: 482 RHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLKPSN 531
+ L + + + LD R G+++LH IHRDLKPSN
Sbjct: 93 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 149
Query: 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
I++ D K+ DFGL R A G + T T Y APE
Sbjct: 150 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 188
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ E + R A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARF-YAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 403 LGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LGRG +G V K + G +AVKR+ A V S + + V V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
+ + E M +L + ++G + + + IA+ + + +E+LH + S
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKG-QTIPEDILGKIAVSIVKALEHLH--SKLS 130
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KPSN+L+ + K+ DFG+ L + I+ AG Y+APE
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPE 179
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 16/148 (10%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRME---AGVISGKGLTEFKSEIAVLTK 449
T F E +G G FG+V+K + DG A+KR + AG + + AVL +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA---LD 506
H H+V + + L+ EY G+L+ I E + + + + + L
Sbjct: 68 --HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQ 121
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILL 534
V RG+ Y+H + S +H D+KPSNI +
Sbjct: 122 VGRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 209
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 34/202 (16%)
Query: 392 NVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV 450
V + + +G G G V + G +AVK++ + E+ +L V
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 80
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR- 509
H+++++LL + PQ TL + L + + + LD R
Sbjct: 81 NHKNIISLLN------------VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 128
Query: 510 ---------GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIET 560
G+++LH IHRDLKPSNI++ D K+ DFGL R A + T
Sbjct: 129 SYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMT 183
Query: 561 RIAGTFGYLAPE------YAGN 576
T Y APE YA N
Sbjct: 184 PYVVTRYYRAPEVILGMGYAAN 205
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK------IAVKRMEAGVISGKGLTE---FKSEIA 445
N S LG G FG V + + K +AVK ++ LTE SE+
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----HLTEREALMSELK 78
Query: 446 VLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHIFNWAEEGLKPLEWN 498
VL+ + H ++V LLG C G L++ EY G L R F ++ +E +
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 499 RRL-------TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + VA+G+ +L A ++ IHRDL NILL K+ DFGL R
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 76/189 (40%), Gaps = 32/189 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL---------TI 503
LV L D + +V EY+ G + H+ RR+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--------------RRIGRFSEPHARFY 146
Query: 504 ALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIA 563
A + EYLH L I+RDLKP N+L+ +V DFG A KG +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLX 199
Query: 564 GTFGYLAPE 572
GT YLAPE
Sbjct: 200 GTPEYLAPE 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISG-KGLTEFKSEIAVLTKVRH 452
+F ++GRG + V L +I A+K ++ +++ + + ++E V + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 453 RHLVALLGHCLDGNEKLL-VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
+ L C +L V EY+ G L +F+ + P E R + + +A +
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA--L 123
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR--LAPEGKGSIETRIAGTFGYL 569
YLH + I+RDLK N+LL + K+ D+G+ + L P G + GT Y+
Sbjct: 124 NYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSXFCGTPNYI 177
Query: 570 APE 572
APE
Sbjct: 178 APE 180
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 16/148 (10%)
Query: 394 TNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRME---AGVISGKGLTEFKSEIAVLTK 449
T F E +G G FG+V+K + DG A+KR + AG + + AVL +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIA---LD 506
H H+V + + L+ EY G+L+ I E + + + + + L
Sbjct: 66 --HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQ 119
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILL 534
V RG+ Y+H + S +H D+KPSNI +
Sbjct: 120 VGRGLRYIHSM---SLVHMDIKPSNIFI 144
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 14/186 (7%)
Query: 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTK--IAVKRMEAGVISGKGLTEFKS-EIAVL 447
R +F+ +LG+G FG V + GT+ A+K ++ V+ E E VL
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 448 TKVRHRHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
+ + L C ++L V EY+ G L HI + + + + + A +
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI-----QQVGKFKEPQAVFYAAE 128
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF 566
++ G+ +LH + I+RDLK N++L + K+ADFG+ + G GT
Sbjct: 129 ISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMDGVTTREFCGTP 184
Query: 567 GYLAPE 572
Y+APE
Sbjct: 185 DYIAPE 190
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLG 460
+G GG V++ A+K + + L +++EIA L K++ ++ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
+ + ++ M G + + + ++ + P W R+ +E +H +
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WERKSYWK----NMLEAVHTIHQH 174
Query: 521 SFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579
+H DLKP+N L+ D M K+ DFG+ ++ P+ ++ G Y+ PE + S
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 580 S 580
S
Sbjct: 234 S 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 403 LGRGGFGTVYKGE-----LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA 457
LG G F V K L K KR G E + E+++L +V H +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 458 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL 517
L + + +L+ E + G L F +E L E + LD GV YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL--FDFLAQKESLSEEEATSFIKQILD---GVNYLHT- 133
Query: 518 AHQSFIHRDLKPSNILLGDDM----RAKVADFGLVRLAPEGKGSIETR-IAGTFGYLAPE 572
+ H DLKP NI+L D K+ DFG LA E + +E + I GT ++APE
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIFGTPEFVAPE 188
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 389 VLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEF--KSEIAV 446
V R + + +G+G FG V++G+ G ++AVK + S + + ++EI
Sbjct: 23 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQ 76
Query: 447 LTKVRHRHLVALLGHCLDGN----EKLLVFEYMPQGTLSRHI--FNWAEEGLKPLEWNRR 500
+RH +++ + N + LV +Y G+L ++ + EG+
Sbjct: 77 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-------- 128
Query: 501 LTIALDVARGVEYLH-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK 555
+ +AL A G+ +LH + HRDLK NIL+ + +AD GL
Sbjct: 129 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 188
Query: 556 GSIE---TRIAGTFGYLAPE 572
+I+ GT Y+APE
Sbjct: 189 DTIDIAPNHRVGTKRYMAPE 208
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 17/186 (9%)
Query: 395 NNFSEE----NILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
F+EE LG+G F V + ++ G + A + +S + + + E +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
++H ++V L + L+F+ + G L E + E+ + + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELF--------EDIVAREYYSEADASHCIQQ 118
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETRIAGTF 566
+E + +HR+LKP N+LL ++ K+ADFGL + EG+ AGT
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTP 177
Query: 567 GYLAPE 572
GYL+PE
Sbjct: 178 GYLSPE 183
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 381 GNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRM----EAGVISGK 435
G+M +S + + LG G +G VYK + +A+KR+ E + G
Sbjct: 20 GSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGT 79
Query: 436 GLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKP 494
+ E+++L +++HR+++ L + N +L L+FEY + L +++ + ++
Sbjct: 80 AI----REVSLLKELQHRNIIELKS-VIHHNHRLHLIFEYA-ENDLKKYMDKNPDVSMRV 133
Query: 495 LEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL-----GDDMRAKVADFGLVR 549
++ + + GV + H + +HRDLKP N+LL + K+ DFGL R
Sbjct: 134 IK-----SFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 33/140 (23%)
Query: 131 CDPR-LNALLSVVKLMGYPQRFAENWKGNDPCS-DWIGVTC------------------- 169
C+P+ ALL + K +G P + D C+ W+GV C
Sbjct: 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 170 --------TKGNITVINFQKM----NLTGTISPEFASFKSLQRLILADNNLSGMIPEGLS 217
+ N+ +NF + NL G I P A L L + N+SG IP+ LS
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 218 VLGALKELDVSNNQLYGKIP 237
+ L LD S N L G +P
Sbjct: 123 QIKTLVTLDFSYNALSGTLP 142
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 61/226 (26%)
Query: 37 VIQNMTSLKEIWLHSNAFSGPLPDF-SGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95
I +T L +++ SG +PDF S +K L +L N +G +P S+ L +L +
Sbjct: 96 AIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155
Query: 96 MTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMG-YPQRFAEN 154
N + G +P+ S S + +S +L G P FA
Sbjct: 156 FDGNRISGAIPDSYGSFSKLFTSMT------------------ISRNRLTGKIPPTFAN- 196
Query: 155 WKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLS----- 209
N+ ++ + L G S F S K+ Q++ LA N+L+
Sbjct: 197 -----------------LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239
Query: 210 ------------------GMIPEGLSVLGALKELDVSNNQLYGKIP 237
G +P+GL+ L L L+VS N L G+IP
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 25/229 (10%)
Query: 4 LIGGLPASFSG-SQIQSLWVNGQNGNAKLGGGI-DVIQNMTSLKEIWLHSNAFSGPLP-D 60
L+G +P + + +Q+ L++ N + G I D + + +L + NA SG LP
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTN----VSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 61 FSGVKQLESLSLRDNFFTGPVPDSLVKLESL-KIVNMTNNLLQGPVPEFDRSVSLDMAKG 119
S + L ++ N +G +PDS L + ++ N L G +P +++L
Sbjct: 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDL 204
Query: 120 SNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINF 179
S N L SV L G + + + + +G N+ ++
Sbjct: 205 SRNM-----------LEGDASV--LFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDL 251
Query: 180 QKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVS 228
+ + GT+ K L L ++ NNL G IP+G G L+ DVS
Sbjct: 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG----GNLQRFDVS 296
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 3 QLIGGLPASFSGSQIQ--SLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD 60
+L G +P +F+ + L N G+A + G D + ++I L N+ + L
Sbjct: 185 RLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSD-----KNTQKIHLAKNSLAFDLGK 239
Query: 61 FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGS 120
K L L LR+N G +P L +L+ L +N++ N L G +P+ D++ +
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYA 299
Query: 121 NNFCL 125
NN CL
Sbjct: 300 NNKCL 304
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
++F + + LG G G V+K + +++ I + E+ VL + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V G E + E+M G+L + + + G P + +++IA V +G+ YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYL 123
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPE 572
+HRD+KPSNIL+ K+ DFG+ +L E + GT Y++PE
Sbjct: 124 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPE 176
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 394 TNNFSEENILGRGGFGTVY--KGELHDGTKIAVKRMEAGVISGKGLTE-FKSEIAVLTKV 450
++ + + +LG+G FG V K ++ G + AVK + + K E E+ +L ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR- 509
H +++ L D LV E G L I + R+ +D AR
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS------------RKRFSEVDAARI 154
Query: 510 ------GVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIET 560
G+ Y+H +HRDLKP N+LL D ++ DFGL E ++
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKMKD 210
Query: 561 RIAGTFGYLAPE 572
+I GT Y+APE
Sbjct: 211 KI-GTAYYIAPE 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ FGL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 419 GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQG 478
G +AVK++ + E+ +L V H+++++LL + PQ
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN------------VFTPQK 94
Query: 479 TLSRHIFNWAEEGLKPLEWNRRLTIALDVAR----------GVEYLHGLAHQSFIHRDLK 528
TL + L + + + LD R G+++LH IHRDLK
Sbjct: 95 TLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLK 151
Query: 529 PSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
PSNI++ D K+ DFGL R A + T T Y APE
Sbjct: 152 PSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRYYRAPE 193
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK------IAVKRMEAGVISGKGLTE---FKSEIA 445
N S LG G FG V + + K +AVK ++ LTE SE+
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----HLTEREALMSELK 94
Query: 446 VLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHIFNWAEEGLKPLEWN 498
VL+ + H ++V LLG C G L++ EY G L R F ++ +E +
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 499 RRL-------TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + VA+G+ +L A ++ IHRDL NILL K+ DFGL R
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 394 TNNFSEENILGRGGFGTVY--KGELHDGTKIAVKRMEAGVISGKGLTE-FKSEIAVLTKV 450
++ + + +LG+G FG V K ++ G + AVK + + K E E+ +L ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR- 509
H +++ L D LV E G L I + R+ +D AR
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS------------RKRFSEVDAARI 137
Query: 510 ------GVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIET 560
G+ Y+H +HRDLKP N+LL D ++ DFGL E ++
Sbjct: 138 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKMKD 193
Query: 561 RIAGTFGYLAPE 572
+I GT Y+APE
Sbjct: 194 KI-GTAYYIAPE 204
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ D GL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 27/191 (14%)
Query: 393 VTNNFSEENILGRGGFGTVY--KGELHDGTKIAVKRME-AGVISGKGLTEFKSEIAVLTK 449
+++ + LG G +G V K +L G + A+K ++ + V + E+AVL +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLS-----RHIFNWAEEGLKPLEWNRRLTIA 504
+ H +++ L D LV E G L R F+ + + I
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----------IM 110
Query: 505 LDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLVRLAPEGKGSIETR 561
V G YLH + +HRDLKP N+LL R K+ DFGL G G ++ R
Sbjct: 111 KQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKER 166
Query: 562 IAGTFGYLAPE 572
+ GT Y+APE
Sbjct: 167 L-GTAYYIAPE 176
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 403 LGRGGFGTVYKGELHDGTK---IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL 459
LG G FG+V +G K +A+K ++ G E E ++ ++ + ++V L+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 460 GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAH 519
G C +LV E G L + + EE + + + V+ G++YL
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVSMGMKYLE---E 454
Query: 520 QSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF--GYLAPE 572
++F+HR+L N+LL + AK++DFGL + R AG + + APE
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 509
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 394 TNNFSEENILGRGGFGTVY--KGELHDGTKIAVKRMEAGVISGKGLTE-FKSEIAVLTKV 450
++ + + +LG+G FG V K ++ G + AVK + + K E E+ +L ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR- 509
H +++ L D LV E G L I + R+ +D AR
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS------------RKRFSEVDAARI 155
Query: 510 ------GVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIET 560
G+ Y+H +HRDLKP N+LL D ++ DFGL E ++
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKMKD 211
Query: 561 RIAGTFGYLAPE 572
+I GT Y+APE
Sbjct: 212 KI-GTAYYIAPE 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK------IAVKRMEAGVISGKGLTE---FKSEIA 445
N S LG G FG V + + K +AVK ++ LTE SE+
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----HLTEREALMSELK 96
Query: 446 VLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHIFNWAEEGLKPLEWN 498
VL+ + H ++V LLG C G L++ EY G L R F ++ +E +
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 499 RRL-------TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + VA+G+ +L A ++ IHRDL NILL K+ DFGL R
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 23/142 (16%)
Query: 439 EFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTL-----SRHIFNWAEEGLK 493
E +EI++L + H +++ L D LV E+ G L +RH F+ +
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-- 149
Query: 494 PLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVADFGLVRL 550
I + G+ YLH + +HRD+KP NILL + + K+ DFGL
Sbjct: 150 --------NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 551 APEGKGSIETRIAGTFGYLAPE 572
+ + R+ GT Y+APE
Sbjct: 199 FSKD-YKLRDRL-GTAYYIAPE 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ D GL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK------IAVKRMEAGVISGKGLTE---FKSEIA 445
N S LG G FG V + + K +AVK ++ LTE SE+
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----HLTEREALMSELK 101
Query: 446 VLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHIFNWAEEGLKPLEWN 498
VL+ + H ++V LLG C G L++ EY G L R F ++ +E +
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 499 RRL-------TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + VA+G+ +L A ++ IHRDL NILL K+ DFGL R
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 395 NNFSEENILGRGGFGTVYKGELHDGTK------IAVKRMEAGVISGKGLTE---FKSEIA 445
N S LG G FG V + + K +AVK ++ LTE SE+
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----HLTEREALMSELK 101
Query: 446 VLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTL------SRHIFNWAEEGLKPLEWN 498
VL+ + H ++V LLG C G L++ EY G L R F ++ +E +
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 499 RRL-------TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
+ + VA+G+ +L A ++ IHRDL NILL K+ DFGL R
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 377 MLEAGNMVISIQVLRN---VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGV-I 432
M G I Q+ RN T+ + + +G G + +V K +H T ME V I
Sbjct: 1 MQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATN-----MEFAVKI 54
Query: 433 SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEG 491
K + EI +L + +H +++ L DG +V E M G L I
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ---- 110
Query: 492 LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVADFGL 547
K + + + VEYLH Q +HRDLKPSNIL D+ ++ DFG
Sbjct: 111 -KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 548 VRLAPEGKGSIETRIAGTFGYLAPE 572
+ G + T T ++APE
Sbjct: 167 AKQLRAENGLLMTPCY-TANFVAPE 190
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 391 RNVTNNFSEENILGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
R + + + LGRG FG V++ + G + AVK++ V E+
Sbjct: 68 REEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAG 120
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ +V L G +G + E + G+L + I + + L +R L
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALE 175
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG-LVRLAPEGKG-SIET--RIAG 564
G+EYLH + +H D+K N+LL D RA + DFG + L P+G G S+ T I G
Sbjct: 176 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 565 TFGYLAPE 572
T ++APE
Sbjct: 233 TETHMAPE 240
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 74/179 (41%), Gaps = 21/179 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LGRG F V + G + A K ++ E EIAVL + V L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 462 CLDG-NEKLLVFEYMPQGTLSRHIFNWAEEGLKPL-EWNRRLTIALDVARGVEYLHGLAH 519
+ +E +L+ EY G IF+ L + N + + + GV YLH
Sbjct: 97 VYENTSEIILILEYAAGG----EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---Q 149
Query: 520 QSFIHRDLKPSNIL------LGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ +H DLKP NIL LGD K+ DFG+ R G I GT YLAPE
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGD---IKIVDFGMSRKI--GHACELREIMGTPEYLAPE 203
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG-----HCLDGNEKLLVFEYMP 476
+A+K++ + E+ ++ V H++++ LL L+ + + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 536
LS+ I L+ R + + G+++LH IHRDLKPSNI++
Sbjct: 112 DANLSQVI-------QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 537 DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
D K+ DFGL R A G + T T Y APE
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+++ +V DFG A KG + GT YLAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLIIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAPE 208
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG-----HCLDGNEKLLVFEYMP 476
+A+K++ + E+ ++ V H++++ LL L+ + + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 536
LS+ I L+ R + + G+++LH IHRDLKPSNI++
Sbjct: 112 DANLSQVI-------QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 537 DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
D K+ DFGL R A G + T T Y APE
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG-----HCLDGNEKLLVFEYMP 476
+A+K++ + E+ ++ V H++++ LL L+ + + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 536
LS+ I L+ R + + G+++LH IHRDLKPSNI++
Sbjct: 112 DANLSQVI-------QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 537 DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
D K+ DFGL R A G + T T Y APE
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG-----HCLDGNEKLLVFEYMP 476
+A+K++ + E+ ++ V H++++ LL L+ + + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 536
LS+ I L+ R + + G+++LH IHRDLKPSNI++
Sbjct: 112 DANLSQVI-------QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 537 DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
D K+ DFGL R A G + T T Y APE
Sbjct: 162 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 403 LGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALL-- 459
+G G +G+V + G ++AVK++ S E+ +L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 460 ---GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + ++ L+ + + L + + + RG++Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 517 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA-PEGKGSIETRIAGTFGYLAPEYAG 575
IHRDLKPSN+ + +D K+ D GL R E G + TR Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 576 NF 577
N+
Sbjct: 196 NW 197
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 396 NFSEENILGRGGFGTV-YKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH 454
N+ +G+G F V + G ++AVK ++ ++ L + E+ + + H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
+V L LV EY G +F++ + E R + V+Y
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGG----EVFDYLVAHGRXKEKEARAKFR-QIVSAVQY- 128
Query: 515 HGLAHQSFI-HRDLKPSNILLGDDMRAKVADFGL 547
HQ FI HRDLK N+LL D K+ADFG
Sbjct: 129 ---CHQKFIVHRDLKAENLLLDADXNIKIADFGF 159
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 197
Query: 570 APE 572
APE
Sbjct: 198 APE 200
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 186
Query: 570 APE 572
APE
Sbjct: 187 APE 189
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 570 APE 572
APE
Sbjct: 193 APE 195
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG-----HCLDGNEKLLVFEYMP 476
+A+K++ + E+ ++ V H++++ LL L+ + + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 536
LS+ I L+ R + + G+++LH IHRDLKPSNI++
Sbjct: 112 DANLSQVI-------QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 537 DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
D K+ DFGL R A G + T T Y APE
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 422 IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG-----HCLDGNEKLLVFEYMP 476
+A+K++ + E+ ++ V H++++ LL L+ + + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 477 QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 536
LS+ I L+ R + + G+++LH IHRDLKPSNI++
Sbjct: 112 DANLSQVI-------QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 537 DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
D K+ DFGL R A G + T T Y APE
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 570 APE 572
APE
Sbjct: 193 APE 195
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 193
Query: 570 APE 572
APE
Sbjct: 194 APE 196
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 25/176 (14%)
Query: 390 LRNVTNNFSEENILGRGGFGTVYKG---------ELHDGTKIAVKRMEAGVISGKGLTE- 439
+RN F+E LG+G F ++KG +LH+ T++ +K ++ + + +E
Sbjct: 5 IRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDK---AHRNYSES 58
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
F ++++K+ H+HLV G C G+E +LV E++ G+L + LK +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY--------LKKNKNCI 110
Query: 500 RLTIALDVARGVEY-LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 554
+ L+VA+ + + +H L + IH ++ NILL + K + ++L+ G
Sbjct: 111 NILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Query: 501 LTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR----------- 549
L I + +A VE+LH + +HRDLKPSNI D KV DFGLV
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 550 LAPEGKGSIETRIAGTFGYLAPE 572
L P + GT Y++PE
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPE 246
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 396 NFSEENI-----LGRGGFGTVYKGELH--DGTKIAVKRMEAGVISGKGLTEFKSEIAVLT 448
+F+ E++ +GRG +G+V K +H G +AVKR+ + V + V+
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKM-VHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR 76
Query: 449 KVRHRHLVALLGHCLDGNEKLLVFEYMPQG--TLSRHIFNWAEEGLKPLEWNRRLTIALD 506
++V G + + E M +++++ ++ + P E ++T+A
Sbjct: 77 SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVI-PEEILGKITLA-- 133
Query: 507 VARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSI-ETRIAG 564
V+ L+ L IHRD+KPSNILL K+ DFG ++ + SI +TR AG
Sbjct: 134 ---TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFG---ISGQLVDSIAKTRDAG 187
Query: 565 TFGYLAPE 572
Y+APE
Sbjct: 188 CRPYMAPE 195
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
YLH L I+RDLKP N+L+ +V DFG A KG + GT YLAP
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEYLAP 207
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 28/164 (17%)
Query: 403 LGRGGFGTVYKGELHDGTK-IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL--- 458
LG GG G V+ +D K +A+K++ + + + EI ++ ++ H ++V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 459 -----------LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV 507
+G + N +V EYM + N E+G LE + RL + +
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETD-----LANVLEQG-PLLEEHARLFM-YQL 129
Query: 508 ARGVEYLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRL 550
RG++Y+H + +HRDLKP+N+ + +D+ K+ DFGL R+
Sbjct: 130 LRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 396 NFSEENILGR---GGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH 452
+F + N L + G ++KG G I VK ++ S + +F E L H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 453 RHLVALLGHCLD--GNEKLLVFEYMPQGTLSRHIFNWAEEGLK-PLEWNRRLTIALDVAR 509
+++ +LG C L+ +MP G+L +N EG ++ ++ + ALD+AR
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSL----YNVLHEGTNFVVDQSQAVKFALDMAR 122
Query: 510 GVEYLHGLAHQSFIHRD-LKPSNILLGDDMRAKVA 543
G+ +LH L + I R L ++++ +DM A+++
Sbjct: 123 GMAFLHTL--EPLIPRHALNSRSVMIDEDMTARIS 155
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 391 RNVTNNFSEENILGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
R + + + +GRG FG V++ + G + AVK++ V E+
Sbjct: 54 REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAG 106
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ +V L G +G + E + G+L + I + + L +R L
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALE 161
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG-LVRLAPEGKG-SIET--RIAG 564
G+EYLH + +H D+K N+LL D RA + DFG + L P+G G S+ T I G
Sbjct: 162 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 565 TFGYLAPE 572
T ++APE
Sbjct: 219 TETHMAPE 226
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYR 192
Query: 570 APE 572
APE
Sbjct: 193 APE 195
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 30/186 (16%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEF--KSEIAVLTKVRHRHLVALLG 460
+G+G FG V++G+ G ++AVK + S + + ++EI +RH +++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 70
Query: 461 HCLDGN----EKLLVFEYMPQGTLSRHI--FNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
N + LV +Y G+L ++ + EG+ + +AL A G+ +L
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHL 122
Query: 515 H-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE---TRIAGTF 566
H + HRDLK NIL+ + +AD GL +I+ GT
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 182
Query: 567 GYLAPE 572
Y+APE
Sbjct: 183 RYMAPE 188
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 391 RNVTNNFSEENILGRGGFGTVYK-GELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK 449
R + + + +GRG FG V++ + G + AVK++ V E+
Sbjct: 70 REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAG 122
Query: 450 VRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR 509
+ +V L G +G + E + G+L + I + + L +R L
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALE 177
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG-LVRLAPEGKG-SIET--RIAG 564
G+EYLH + +H D+K N+LL D RA + DFG + L P+G G S+ T I G
Sbjct: 178 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 565 TFGYLAPE 572
T ++APE
Sbjct: 235 TETHMAPE 242
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 30/186 (16%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEF--KSEIAVLTKVRHRHLVALLG 460
+G+G FG V++G+ G ++AVK + S + + ++EI +RH +++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 67
Query: 461 HCLDGN----EKLLVFEYMPQGTLSRHI--FNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
N + LV +Y G+L ++ + EG+ + +AL A G+ +L
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHL 119
Query: 515 H-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE---TRIAGTF 566
H + HRDLK NIL+ + +AD GL +I+ GT
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 179
Query: 567 GYLAPE 572
Y+APE
Sbjct: 180 RYMAPE 185
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 30/186 (16%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEF--KSEIAVLTKVRHRHLVALLG 460
+G+G FG V++G+ G ++AVK + S + + ++EI +RH +++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 65
Query: 461 HCLDGN----EKLLVFEYMPQGTLSRHI--FNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
N + LV +Y G+L ++ + EG+ + +AL A G+ +L
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHL 117
Query: 515 H-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE---TRIAGTF 566
H + HRDLK NIL+ + +AD GL +I+ GT
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 177
Query: 567 GYLAPE 572
Y+APE
Sbjct: 178 RYMAPE 183
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 30/186 (16%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEF--KSEIAVLTKVRHRHLVALLG 460
+G+G FG V++G+ G ++AVK + S + + ++EI +RH +++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 64
Query: 461 HCLDGN----EKLLVFEYMPQGTLSRHI--FNWAEEGLKPLEWNRRLTIALDVARGVEYL 514
N + LV +Y G+L ++ + EG+ + +AL A G+ +L
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHL 116
Query: 515 H-----GLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE---TRIAGTF 566
H + HRDLK NIL+ + +AD GL +I+ GT
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 567 GYLAPE 572
Y+APE
Sbjct: 177 RYMAPE 182
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 23/175 (13%)
Query: 390 LRNVTNNFSEENILGRGGFGTVYKG---------ELHDGTKIAVKRMEAGVISGKGLTE- 439
+RN F+E LG+G F ++KG +LH+ T++ +K ++ + + +E
Sbjct: 5 IRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDK---AHRNYSES 58
Query: 440 FKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNR 499
F ++++K+ H+HLV G C+ G+E +LV E++ G+L ++ + + W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK--NKNCINILW-- 114
Query: 500 RLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 554
+L +A +A +H L + IH ++ NILL + K + ++L+ G
Sbjct: 115 KLEVAKQLAAA---MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 16/186 (8%)
Query: 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAV-------KRMEAGVISGKGLTEFKSEIAV 446
+ +S + LG G FG V+ + K V K +E I L + EIA+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 447 LTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALD 506
L++V H +++ +L + LV E G +F + + + L+ I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGL---DLFAFIDRHPR-LDEPLASYIFRQ 138
Query: 507 VARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTF 566
+ V YL + IHRD+K NI++ +D K+ DFG GK + GT
Sbjct: 139 LVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--LFYTFCGTI 193
Query: 567 GYLAPE 572
Y APE
Sbjct: 194 EYCAPE 199
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVAL 458
+LG G + V L +G + AVK +E +G + E+ L + + +++++ L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQ--AGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLT--IALDVARGVEYLHG 516
+ D LVFE + G++ HI K +N R + DVA +++LH
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHI-------QKQKHFNEREASRVVRDVAAALDFLHT 129
Query: 517 LAHQSFIHRDLKPSNILLGDDMR---AKVADFGL 547
+ HRDLKP NIL + K+ DF L
Sbjct: 130 ---KGIAHRDLKPENILCESPEKVSPVKICDFDL 160
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYYR 194
Query: 570 APE 572
APE
Sbjct: 195 APE 197
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 394 TNNFSEENILGRGGFGTVY--KGELHDGTKIAVKRMEAGVISGKGLTE-FKSEIAVLTKV 450
++ + + +LG+G FG V K ++ G + AVK + + K E E+ +L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVAR- 509
H ++ L D LV E G L I + R+ +D AR
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS------------RKRFSEVDAARI 131
Query: 510 ------GVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVRLAPEGKGSIET 560
G+ Y H +HRDLKP N+LL D ++ DFGL E +
Sbjct: 132 IRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL-STHFEASKKXKD 187
Query: 561 RIAGTFGYLAPE 572
+I GT Y+APE
Sbjct: 188 KI-GTAYYIAPE 198
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 402 ILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTEFKS-EIAVLTKVRHRHLVALL 459
+LG+G FG V E ++ AVK ++ V+ E E VL + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 460 GHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
C ++L V EY+ G L HI + + + + A ++A G+ +L
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFFLQS-- 460
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ I+RDLK N++L + K+ADFG+ + G GT Y+APE
Sbjct: 461 -KGIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPE 512
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 402 ILGRGGFGTVYKGELHDGTKI-AVKRMEAGVISGKGLTEFKS-EIAVLTKVRHRHLVALL 459
+LG+G FG V E ++ AVK ++ V+ E E VL + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 460 GHCLDGNEKL-LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
C ++L V EY+ G L HI + + + + A ++A G+ +L
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFFLQS-- 139
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ I+RDLK N++L + K+ADFG+ + G GT Y+APE
Sbjct: 140 -KGIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPE 191
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 395 NNFSEENILGRGGFGTVYKGELHD-GTKIAVKRMEA-GVISGKGLTEFKSEIAVLTKVRH 452
+ F LG G FG V + + G A+K ++ V+ K + +E +L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512
LV L D + +V EY+ G + H+ + A + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 513 YLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
YLH L I+RDLKP N+L+ +V DFG A KG + GT LAPE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRT-WXLCGTPEALAPE 208
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 388 QVLRN---VTNNFSEENILGRGGFGTVYKGELHDGT--KIAVKRMEAGVISGKGLTEFKS 442
Q+ RN T+ + + +G G + +V K +H T + AVK ++ S + TE
Sbjct: 12 QLHRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDK---SKRDPTE--- 64
Query: 443 EIAVLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRL 501
EI +L + +H +++ L DG +V E G L I K
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR-----QKFFSEREAS 119
Query: 502 TIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVADFGLVRLAPEGKGS 557
+ + + VEYLH Q +HRDLKPSNIL D+ ++ DFG + G
Sbjct: 120 AVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176
Query: 558 IETRIAGTFGYLAPE 572
+ T T ++APE
Sbjct: 177 LXTPCY-TANFVAPE 190
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 401 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+ILG+G V++G + ++ + + + E VL K+ H+++V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 461 --HCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGVEY 513
K+L+ E+ P G+L + EE GL E+ L + DV G+ +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSL----YTVLEEPSNAYGLPESEF---LIVLRDVVGGMNH 127
Query: 514 LHGLAHQSFIHRDLKPSNIL--LGDDMRA--KVADFGLVRLAPEGKGSIETRIAGTFGYL 569
L +HR++KP NI+ +G+D ++ K+ DFG R + + + + GT YL
Sbjct: 128 LR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYL 182
Query: 570 APE 572
P+
Sbjct: 183 HPD 185
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 401 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLG 460
+ILG+G V++G + ++ + + + E VL K+ H+++V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 461 --HCLDGNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGVEY 513
K+L+ E+ P G+L + EE GL E+ L + DV G+ +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSL----YTVLEEPSNAYGLPESEF---LIVLRDVVGGMNH 127
Query: 514 LHGLAHQSFIHRDLKPSNIL--LGDDMRA--KVADFGLVRLAPEGKGSIETRIAGTFGYL 569
L +HR++KP NI+ +G+D ++ K+ DFG R + + + + GT YL
Sbjct: 128 LR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYL 182
Query: 570 APE 572
P+
Sbjct: 183 HPD 185
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 17/184 (9%)
Query: 372 PGDIQMLEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKG-ELHDGTKIAVKRMEAG 430
PG + L A + + R + F E + G+G FGTV G E G +A+K++
Sbjct: 2 PGSMMSLNAA--AAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD 59
Query: 431 VISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL-------LVFEYMPQGTLSRH 483
+ ++AVL H ++V L + E+ +V EY+P TL R
Sbjct: 60 PRFRNRELQIMQDLAVL---HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRC 115
Query: 484 IFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-DMRAKV 542
N+ + P ++ + + R + LH L + HRD+KP N+L+ + D K+
Sbjct: 116 CRNYYRRQVAPPPILIKVFL-FQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKL 173
Query: 543 ADFG 546
DFG
Sbjct: 174 CDFG 177
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYR 192
Query: 570 APE 572
APE
Sbjct: 193 APE 195
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 510 GVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
G+++LH IHRDLKPSNI++ D K+ DFGL R A G + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYR 192
Query: 570 APE 572
APE
Sbjct: 193 APE 195
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKIAVKRME-AGVISGKGLT--EFKSEIAVLTKVRHRHLV 456
++G+G F V + G + AVK ++ A S GL+ + K E ++ ++H H+V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV-EYLH 515
LL +VFE+M L I A+ G E +A R + E L
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE-----AVASHYMRQILEALR 146
Query: 516 GLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ IHRD+KP +LL + K+ FG+ E G + GT ++APE
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES-GLVAGGRVGTPHFMAPE 205
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 427 MEAGV-ISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHI 484
ME V + K + EI +L + +H +++ L DG LV E M G L I
Sbjct: 53 MEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 485 FNWAEEGLKPLEWNRRLTIALD-VARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----R 539
+ R + L + + VEYLH Q +HRDLKPSNIL D+
Sbjct: 113 LR------QKFFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPEC 163
Query: 540 AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
++ DFG + G + T T ++APE
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCY-TANFVAPE 195
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEF--KSEIAVLTKVRHRHLVALLG 460
LG G FG V++ ++ V + + + L ++ K+EI+++ ++ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKF---INTPYPLDKYTVKNEISIMNQLHHPKLINLHD 115
Query: 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ 520
D E +L+ E++ G L I A E K E + G++++H
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRI---AAEDYKMSE-AEVINYMRQACEGLKHMH---EH 168
Query: 521 SFIHRDLKPSNILLGDDMRA--KVADFGL-VRLAPEGKGSIETRIAGTFGYLAPE 572
S +H D+KP NI+ + K+ DFGL +L P+ + T T + APE
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPE 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 401 NILGRGGFGTVYKG-ELHDGTKIAVKRME-AGVISGKGLT--EFKSEIAVLTKVRHRHLV 456
++G+G F V + G + AVK ++ A S GL+ + K E ++ ++H H+V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV-EYLH 515
LL +VFE+M L I A+ G E +A R + E L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE-----AVASHYMRQILEALR 144
Query: 516 GLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ IHRD+KP +LL + K+ FG+ E G + GT ++APE
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES-GLVAGGRVGTPHFMAPE 203
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 399 EENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLV 456
+E++LG G V L + AVK +E G + E+ +L + + HR+++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ--PGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + LVFE M G++ HI LE + + DVA +++LH
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHK--RRHFNELEAS---VVVQDVASALDFLH- 128
Query: 517 LAHQSFIHRDLKPSNILLGDDMR---AKVADFGL---VRL----APEGKGSIETRIAGTF 566
++ HRDLKP NIL + K+ DFGL ++L +P + T G+
Sbjct: 129 --NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP-CGSA 185
Query: 567 GYLAPEYAGNF 577
Y+APE F
Sbjct: 186 EYMAPEVVEAF 196
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 427 MEAGV-ISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHI 484
ME V + K + EI +L + +H +++ L DG LV E M G L I
Sbjct: 53 MEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 485 FNWAEEGLKPLEWNRRLTIALD-VARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----R 539
+ R + L + + VEYLH Q +HRDLKPSNIL D+
Sbjct: 113 LR------QKFFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPEC 163
Query: 540 AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
++ DFG + G + T T ++APE
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCY-TANFVAPE 195
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 48/243 (19%)
Query: 343 NSESVKITVAGSNVSVGAISETHTVPSSEPGDIQM--LEAGNMVISIQVLRNVTNNFSEE 400
S +V ++ + +T+T+PS+ +IQ +E G +
Sbjct: 355 RSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCI---------------- 398
Query: 401 NILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
G G FG V++G + +A+K + S +F E + + H H+V
Sbjct: 399 ---GEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+G + N ++ E G L + + +LD+A + Y +
Sbjct: 455 KLIG-VITENPVWIIMELCTLGELRSFL--------------QVRKFSLDLASLILYAYQ 499
Query: 517 LA-------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
L+ + F+HRD+ N+L+ + K+ DFGL R + ++ ++
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 570 APE 572
APE
Sbjct: 560 APE 562
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 455 LVALLGHCLDGNEKLLVFEYM-PQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E M P L I E G E R + V V +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFI---TERGALQEELAR--SFFWQVLEAVRH 129
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 130 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 183
Query: 573 Y 573
+
Sbjct: 184 W 184
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 24/205 (11%)
Query: 387 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKS---- 442
I L + + ++ + + G +G V G +G +A+KR+ V G+ +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 443 -----EIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEW 497
EI +L H +++ L + E + Y+ + L +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL--------VTELMRTDLAQVIH 125
Query: 498 NRRLTIALDVARGVEY-----LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552
++R+ I+ + Y LH L +HRDL P NILL D+ + DF L R
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--E 183
Query: 553 EGKGSIETRIAGTFGYLAPEYAGNF 577
+ + +T Y APE F
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQF 208
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 79/215 (36%), Gaps = 71/215 (33%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEE------------------GLKPLEW 497
LLG C G +++ E+ G LS ++ + E G P++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 498 NRRL-------------------------------------------TIALDVARGVEYL 514
RRL + VA+G+E+L
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A + IHRDL NILL + K+ DFGL R
Sbjct: 217 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 24/205 (11%)
Query: 387 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKS---- 442
I L + + ++ + + G +G V G +G +A+KR+ V G+ +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 443 -----EIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEW 497
EI +L H +++ L + E + Y+ + L +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL--------VTELMRTDLAQVIH 125
Query: 498 NRRLTIALDVARGVEY-----LHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552
++R+ I+ + Y LH L +HRDL P NILL D+ + DF L R
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--E 183
Query: 553 EGKGSIETRIAGTFGYLAPEYAGNF 577
+ + +T Y APE F
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQF 208
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 79/215 (36%), Gaps = 71/215 (33%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEE------------------GLKPLEW 497
LLG C G +++ E+ G LS ++ + E G P++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 498 NRRL-------------------------------------------TIALDVARGVEYL 514
RRL + VA+G+E+L
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A + IHRDL NILL + K+ DFGL R
Sbjct: 215 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 493 KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR--- 549
+P+ ++ + VARG+E+L + + IHRDL NILL ++ K+ DFGL R
Sbjct: 194 EPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 550 LAPEGKGSIETRIAGTFGYLAPE 572
P+ +TR+ ++APE
Sbjct: 251 KNPDYVRKGDTRLP--LKWMAPE 271
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 79/215 (36%), Gaps = 71/215 (33%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEE------------------GLKPLEW 497
LLG C G +++ E+ G LS ++ + E G P++
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 498 NRRL-------------------------------------------TIALDVARGVEYL 514
RRL + VA+G+E+L
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A + IHRDL NILL + K+ DFGL R
Sbjct: 210 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 79/215 (36%), Gaps = 71/215 (33%)
Query: 403 LGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTE-----FKSEIAVLTKV-RHRHLV 456
LGRG FG V + + K A R A + +G T SE+ +L + H ++V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 457 ALLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEE------------------GLKPLEW 497
LLG C G +++ E+ G LS ++ + E G P++
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 498 NRRL-------------------------------------------TIALDVARGVEYL 514
RRL + VA+G+E+L
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 515 HGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549
A + IHRDL NILL + K+ DFGL R
Sbjct: 208 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 9/172 (5%)
Query: 403 LGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 461
LGRG +G V K + G AVKR+ A V S + V V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 462 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS 521
+ + E + +L + ++G + + + IA+ + + +E+LH + S
Sbjct: 102 LFREGDVWICXE-LXDTSLDKFYKQVIDKG-QTIPEDILGKIAVSIVKALEHLH--SKLS 157
Query: 522 FIHRDLKPSNILLGDDMRAKVADFGLV-RLAPEGKGSIETRIAGTFGYLAPE 572
IHRD+KPSN+L+ + K DFG+ L + I+ AG Y APE
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID---AGCKPYXAPE 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 27/181 (14%)
Query: 403 LGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL 458
+G G FG V++G + +A+K + S +F E + + H H+V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+G + N ++ E G L + + +LD+A + Y + L+
Sbjct: 77 IG-VITENPVWIIMELCTLGELRSFL--------------QVRKFSLDLASLILYAYQLS 121
Query: 519 -------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 571
+ F+HRD+ N+L+ + K+ DFGL R + ++ ++AP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 572 E 572
E
Sbjct: 182 E 182
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 401 NILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVAL 458
+L GGF VY+ + + G + A+KR+ + + E+ + K+ H ++V
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 459 LGHCLDGNEK-------LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGV 511
G E+ L+ + +G L + G PL + L I R V
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG--PLSCDTVLKIFYQTCRAV 149
Query: 512 EYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546
+++H IHRDLK N+LL + K+ DFG
Sbjct: 150 QHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 343 NSESVKITVAGSNVSVGAISETHTVPSSEPGDIQM--LEAGNMVISIQVLRNVTNNFSEE 400
S +V ++ + +T+T+PS+ +IQ +E G +
Sbjct: 355 RSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCI---------------- 398
Query: 401 NILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLV 456
G G FG V++G + +A+K + S +F E + + H H+V
Sbjct: 399 ---GEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+G + N ++ E G L + + +LD+A + Y +
Sbjct: 455 KLIG-VITENPVWIIMELCTLGELRSFL--------------QVRKFSLDLASLILYAYQ 499
Query: 517 LA-------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569
L+ + F+HRD+ N+L+ K+ DFGL R + ++ ++
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 570 APE 572
APE
Sbjct: 560 APE 562
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 403 LGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL 458
+G G FG V++G + +A+K + S +F E + + H H+V L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+G + N ++ E G L ++ + L+ + A ++ + YL
Sbjct: 105 IG-VITENPVWIIMELCTLGELR----SFLQVRKYSLDLASLILYAYQLSTALAYLES-- 157
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ F+HRD+ N+L+ + K+ DFGL R + ++ ++APE
Sbjct: 158 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 403 LGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL 458
+G G FG V++G + +A+K + S +F E + + H H+V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+G + N ++ E G L ++ + L+ + A ++ + YL
Sbjct: 77 IG-VITENPVWIIMELCTLGELR----SFLQVRKYSLDLASLILYAYQLSTALAYLES-- 129
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ F+HRD+ N+L+ + K+ DFGL R + ++ ++APE
Sbjct: 130 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 23/191 (12%)
Query: 399 EENILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLV 456
+E++LG G V L + AVK +E G + E+ +L + + HR+++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ--PGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 457 ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHG 516
L+ + + LVFE M G++ HI LE + + DVA +++LH
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHK--RRHFNELEAS---VVVQDVASALDFLH- 128
Query: 517 LAHQSFIHRDLKPSNILLGDDMR---AKVADFGL---VRL----APEGKGSIETRIAGTF 566
++ HRDLKP NIL + K+ DF L ++L +P + T G+
Sbjct: 129 --NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP-CGSA 185
Query: 567 GYLAPEYAGNF 577
Y+APE F
Sbjct: 186 EYMAPEVVEAF 196
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 130
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 131 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 184
Query: 573 Y 573
+
Sbjct: 185 W 185
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 389 VLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFK-SEIAVL 447
V R + +G+G +G V+ G+ G K+AVK + + + F+ +EI
Sbjct: 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVF----FTTEEASWFRETEIYQT 85
Query: 448 TKVRHRHLVALLGHCLDGN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTI 503
+RH +++ + + G + L+ +Y G+L ++ + L+ L +
Sbjct: 86 VLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKL 139
Query: 504 ALDVARGVEYLHG-----LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSI 558
A G+ +LH + HRDLK NIL+ + +AD GL +
Sbjct: 140 AYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV 199
Query: 559 E----TRIAGTFGYLAPE 572
+ TR+ GT Y+ PE
Sbjct: 200 DIPPNTRV-GTKRYMPPE 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 403 LGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL 458
+G G FG V++G + +A+K + S +F E + + H H+V L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+G + N ++ E G L ++ + L+ + A ++ + YL
Sbjct: 74 IG-VITENPVWIIMELCTLGELR----SFLQVRKYSLDLASLILYAYQLSTALAYLES-- 126
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ F+HRD+ N+L+ + K+ DFGL R + ++ ++APE
Sbjct: 127 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 403 LGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL 458
+G G FG V++G + +A+K + S +F E + + H H+V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+G + N ++ E G L ++ + L+ + A ++ + YL
Sbjct: 77 IG-VITENPVWIIMELCTLGELR----SFLQVRKYSLDLASLILYAYQLSTALAYLES-- 129
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ F+HRD+ N+L+ + K+ DFGL R + ++ ++APE
Sbjct: 130 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 172
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 173 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 226
Query: 573 Y 573
+
Sbjct: 227 W 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 403 LGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL 458
+G G FG V++G + +A+K + S +F E + + H H+V L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+G + N ++ E G L ++ + L+ + A ++ + YL
Sbjct: 82 IG-VITENPVWIIMELCTLGELR----SFLQVRKYSLDLASLILYAYQLSTALAYLES-- 134
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ F+HRD+ N+L+ + K+ DFGL R + ++ ++APE
Sbjct: 135 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 158
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 159 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 573 Y 573
+
Sbjct: 213 W 213
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 158
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 159 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 573 Y 573
+
Sbjct: 213 W 213
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 172
Query: 514 LHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 173 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 226
Query: 573 Y 573
+
Sbjct: 227 W 227
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 158
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 159 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 573 Y 573
+
Sbjct: 213 W 213
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 157
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 158 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 211
Query: 573 Y 573
+
Sbjct: 212 W 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 403 LGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL 458
+G G FG V++G + +A+K + S +F E + + H H+V L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+G + N ++ E G L ++ + L+ + A ++ + YL
Sbjct: 80 IG-VITENPVWIIMELCTLGELR----SFLQVRKYSLDLASLILYAYQLSTALAYLES-- 132
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ F+HRD+ N+L+ + K+ DFGL R + ++ ++APE
Sbjct: 133 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 403 LGRGGFGTVYKGEL----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVAL 458
+G G FG V++G + +A+K + S +F E + + H H+V L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA 518
+G + N ++ E G L ++ + L+ + A ++ + YL
Sbjct: 79 IG-VITENPVWIIMELCTLGELR----SFLQVRKYSLDLASLILYAYQLSTALAYLES-- 131
Query: 519 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
+ F+HRD+ N+L+ + K+ DFGL R + ++ ++APE
Sbjct: 132 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 157
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 158 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 211
Query: 573 Y 573
+
Sbjct: 212 W 212
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 144
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 145 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 198
Query: 573 Y 573
+
Sbjct: 199 W 199
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 157
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 158 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 211
Query: 573 Y 573
+
Sbjct: 212 W 212
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 158
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 159 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 573 Y 573
+
Sbjct: 213 W 213
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 144
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 145 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 198
Query: 573 Y 573
+
Sbjct: 199 W 199
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 145
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 146 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 199
Query: 573 Y 573
+
Sbjct: 200 W 200
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 130
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 131 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 184
Query: 573 Y 573
+
Sbjct: 185 W 185
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 145
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 146 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 199
Query: 573 Y 573
+
Sbjct: 200 W 200
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 75 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 129
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 130 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 183
Query: 573 Y 573
+
Sbjct: 184 W 184
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVISGKGL----TEFKSEIAVLTKVR--HRH 454
+LG GGFG+VY G + D +A+K +E IS G T E+ +L KV
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNW-AEEGLKPLEWNRRLTIALDVARGVEY 513
++ LL + +L+ E P+ + +F++ E G E R + V V +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPV--QDLFDFITERGALQEELAR--SFFWQVLEAVRH 157
Query: 514 LHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPE 572
H +HRD+K NIL+ + K+ DFG L K ++ T GT Y PE
Sbjct: 158 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 211
Query: 573 Y 573
+
Sbjct: 212 W 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,918,083
Number of Sequences: 62578
Number of extensions: 702219
Number of successful extensions: 3803
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 1875
Number of HSP's gapped (non-prelim): 1234
length of query: 580
length of database: 14,973,337
effective HSP length: 104
effective length of query: 476
effective length of database: 8,465,225
effective search space: 4029447100
effective search space used: 4029447100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)