Query 008026
Match_columns 580
No_of_seqs 569 out of 4092
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 16:20:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 5.6E-41 1.9E-45 335.7 16.0 179 395-580 24-203 (350)
2 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.9E-40 6.3E-45 326.5 13.7 178 395-580 32-212 (311)
3 4fih_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 325.9 16.6 174 395-580 74-248 (346)
4 4fie_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 328.1 18.6 175 394-580 150-325 (423)
5 3hyh_A Carbon catabolite-derep 100.0 8E-39 2.7E-43 310.6 17.0 174 395-579 13-188 (275)
6 3ubd_A Ribosomal protein S6 ki 100.0 6.9E-40 2.4E-44 322.5 8.6 177 395-580 24-204 (304)
7 3fpq_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 310.8 18.3 172 397-580 28-207 (290)
8 4asz_A BDNF/NT-3 growth factor 100.0 3.7E-39 1.3E-43 318.1 12.9 181 395-580 13-208 (299)
9 4aoj_A High affinity nerve gro 100.0 1.4E-38 4.8E-43 318.4 16.6 181 395-580 41-238 (329)
10 4g31_A Eukaryotic translation 100.0 1.8E-38 6.2E-43 313.7 16.3 180 395-580 5-208 (299)
11 3omv_A RAF proto-oncogene seri 100.0 3.1E-38 1.1E-42 311.5 17.4 172 395-576 36-208 (307)
12 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-38 4.8E-43 317.0 14.3 171 395-580 58-234 (336)
13 4gt4_A Tyrosine-protein kinase 100.0 1.6E-38 5.4E-43 315.0 13.7 182 395-580 26-225 (308)
14 3hmm_A TGF-beta receptor type- 100.0 9.9E-37 3.4E-41 302.7 15.5 173 395-577 3-187 (303)
15 4ase_A Vascular endothelial gr 100.0 1.7E-36 5.8E-41 305.7 15.7 191 386-580 55-265 (353)
16 4b99_A Mitogen-activated prote 100.0 8.3E-36 2.8E-40 305.9 17.7 176 394-578 53-238 (398)
17 4f9c_A Cell division cycle 7-r 100.0 5.5E-35 1.9E-39 296.7 17.5 175 389-578 15-222 (361)
18 3v5w_A G-protein coupled recep 100.0 6.3E-35 2.1E-39 312.0 16.8 176 394-580 188-369 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 8.2E-34 2.8E-38 305.4 19.2 176 394-580 156-334 (573)
20 3fe3_A MAP/microtubule affinit 100.0 3.4E-32 1.2E-36 274.0 16.8 177 393-579 13-190 (328)
21 1o6l_A RAC-beta serine/threoni 100.0 1.5E-31 5E-36 270.1 17.7 178 394-580 4-183 (337)
22 3zgw_A Maternal embryonic leuc 100.0 8.6E-32 2.9E-36 272.6 15.6 179 392-579 7-186 (347)
23 3v8s_A RHO-associated protein 100.0 5.3E-32 1.8E-36 280.0 12.7 183 387-578 61-245 (410)
24 4aw2_A Serine/threonine-protei 100.0 8.7E-32 3E-36 280.5 14.2 182 387-575 66-249 (437)
25 4dc2_A Protein kinase C IOTA t 100.0 2.6E-31 8.8E-36 273.3 16.7 178 394-580 51-231 (396)
26 3fxz_A Serine/threonine-protei 100.0 6.5E-31 2.2E-35 261.2 19.0 175 394-580 19-194 (297)
27 3s95_A LIMK-1, LIM domain kina 100.0 8.9E-31 3E-35 262.0 19.5 177 395-580 10-200 (310)
28 4eqm_A Protein kinase; transfe 100.0 4E-31 1.4E-35 262.4 16.8 178 394-579 10-189 (294)
29 2yab_A Death-associated protei 100.0 8.5E-31 2.9E-35 267.0 19.4 178 393-580 10-196 (361)
30 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.6E-31 5.5E-36 271.6 14.0 177 394-579 22-201 (353)
31 2bdw_A Hypothetical protein K1 100.0 8.8E-31 3E-35 267.5 19.0 179 392-580 26-208 (362)
32 2vd5_A DMPK protein; serine/th 100.0 1.6E-31 5.5E-36 276.6 13.0 183 386-575 52-236 (412)
33 3a8x_A Protein kinase C IOTA t 100.0 8.2E-31 2.8E-35 265.8 17.9 177 395-580 9-188 (345)
34 3soa_A Calcium/calmodulin-depe 100.0 6.8E-31 2.3E-35 274.7 17.8 180 392-580 8-191 (444)
35 1xjd_A Protein kinase C, theta 100.0 5.3E-31 1.8E-35 266.8 16.3 179 393-580 15-196 (345)
36 3p86_A Serine/threonine-protei 100.0 6.5E-31 2.2E-35 262.7 16.5 180 394-580 36-217 (309)
37 1fot_A TPK1 delta, CAMP-depend 100.0 6.4E-31 2.2E-35 263.5 16.2 175 394-580 5-181 (318)
38 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.1E-31 2.4E-35 269.0 16.7 179 394-580 64-263 (365)
39 3uim_A Brassinosteroid insensi 100.0 2E-31 6.8E-36 268.7 12.3 195 383-579 18-212 (326)
40 3c0i_A Peripheral plasma membr 100.0 1.1E-30 3.7E-35 266.0 17.7 183 393-580 22-211 (351)
41 4fr4_A YANK1, serine/threonine 100.0 1E-30 3.4E-35 268.0 16.8 172 395-576 15-188 (384)
42 3niz_A Rhodanese family protei 100.0 1.4E-30 4.9E-35 260.5 17.5 176 393-577 19-194 (311)
43 2i0e_A Protein kinase C-beta I 100.0 8.2E-31 2.8E-35 266.3 15.3 178 394-580 19-199 (353)
44 3qd2_B Eukaryotic translation 100.0 1.2E-30 4.2E-35 263.4 16.3 182 393-580 4-254 (332)
45 3o0g_A Cell division protein k 100.0 2.3E-30 8E-35 256.6 17.8 175 395-578 2-177 (292)
46 1tki_A Titin; serine kinase, m 100.0 2E-30 7E-35 260.4 17.5 175 393-579 3-180 (321)
47 3a62_A Ribosomal protein S6 ki 100.0 1.4E-30 4.9E-35 262.4 16.2 178 394-580 16-199 (327)
48 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.3E-30 4.3E-35 264.8 15.4 174 395-580 41-216 (350)
49 2psq_A Fibroblast growth facto 100.0 2.1E-30 7.1E-35 265.7 17.1 183 394-580 80-283 (370)
50 2y0a_A Death-associated protei 100.0 5.2E-30 1.8E-34 258.2 19.4 178 393-580 9-195 (326)
51 2r5t_A Serine/threonine-protei 100.0 1.4E-30 4.9E-35 266.3 14.6 178 394-580 37-217 (373)
52 4hcu_A Tyrosine-protein kinase 100.0 1.4E-30 4.7E-35 255.0 13.8 175 395-579 10-184 (269)
53 3tki_A Serine/threonine-protei 100.0 2.1E-30 7.1E-35 260.7 15.1 178 393-579 5-184 (323)
54 1ob3_A PFPK5, cell division co 100.0 2.4E-30 8.3E-35 256.0 15.2 174 395-577 2-175 (288)
55 2c30_A Serine/threonine-protei 100.0 7.1E-30 2.4E-34 256.6 18.7 171 397-579 47-218 (321)
56 2qkw_B Protein kinase; three-h 100.0 9.5E-31 3.3E-35 263.2 11.9 185 389-579 33-218 (321)
57 2acx_A G protein-coupled recep 100.0 3.1E-30 1.1E-34 275.3 16.3 178 394-579 183-362 (576)
58 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.8E-30 9.7E-35 260.5 15.1 175 394-579 8-184 (336)
59 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.1E-30 1.4E-34 273.7 17.0 182 394-580 184-367 (543)
60 2zv2_A Calcium/calmodulin-depe 100.0 6.2E-30 2.1E-34 254.4 17.2 175 394-578 12-213 (298)
61 2vuw_A Serine/threonine-protei 100.0 5.2E-31 1.8E-35 266.8 9.2 169 394-578 19-253 (336)
62 3rp9_A Mitogen-activated prote 100.0 4.1E-30 1.4E-34 271.5 16.1 177 394-579 52-261 (458)
63 3sxs_A Cytoplasmic tyrosine-pr 100.0 5E-30 1.7E-34 250.9 15.5 175 394-578 7-181 (268)
64 3kul_A Ephrin type-A receptor 100.0 4.2E-30 1.4E-34 258.8 15.2 178 394-579 48-231 (325)
65 3gni_B Strad alpha; kinase fol 100.0 1.4E-29 4.7E-34 261.8 19.3 176 395-576 25-209 (389)
66 3rgz_A Protein brassinosteroid 100.0 1.7E-30 5.8E-35 291.6 13.4 258 2-263 428-749 (768)
67 3oz6_A Mitogen-activated prote 100.0 8.7E-30 3E-34 263.1 17.3 176 391-576 5-204 (388)
68 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-29 3.7E-34 254.2 17.0 173 394-576 56-230 (311)
69 3kk8_A Calcium/calmodulin depe 100.0 1.7E-29 5.8E-34 249.3 17.9 178 393-580 4-185 (284)
70 3n9x_A Phosphotransferase; mal 100.0 1.1E-29 3.9E-34 265.7 17.5 174 393-575 24-224 (432)
71 1kob_A Twitchin; kinase, intra 100.0 2E-29 6.9E-34 259.1 18.9 176 393-579 49-227 (387)
72 3gen_A Tyrosine-protein kinase 100.0 4E-30 1.4E-34 253.7 13.1 176 394-579 23-198 (283)
73 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-29 5.9E-34 253.5 17.6 178 394-577 4-183 (317)
74 2y94_A 5'-AMP-activated protei 100.0 9.7E-30 3.3E-34 267.8 16.3 176 394-579 15-192 (476)
75 3ttj_A Mitogen-activated prote 100.0 9E-30 3.1E-34 268.3 16.0 175 393-580 60-241 (464)
76 3ork_A Serine/threonine protei 100.0 2.8E-30 9.4E-35 258.6 11.4 180 393-580 10-197 (311)
77 3soc_A Activin receptor type-2 100.0 9.3E-30 3.2E-34 256.0 15.1 170 395-577 24-208 (322)
78 3uc3_A Serine/threonine-protei 100.0 8.5E-30 2.9E-34 260.2 15.0 173 394-579 19-194 (361)
79 4ejn_A RAC-alpha serine/threon 100.0 1.8E-30 6.2E-35 273.1 10.1 180 393-580 146-327 (446)
80 3llt_A Serine/threonine kinase 100.0 1.7E-29 5.9E-34 258.2 16.9 181 386-580 26-237 (360)
81 4agu_A Cyclin-dependent kinase 100.0 2E-29 6.9E-34 252.2 17.0 174 394-576 2-176 (311)
82 2qol_A Ephrin receptor; recept 100.0 7.4E-30 2.5E-34 261.7 14.0 177 395-579 45-227 (373)
83 1luf_A Muscle-specific tyrosin 100.0 5.2E-30 1.8E-34 260.2 12.6 185 391-579 43-253 (343)
84 3kn6_A Ribosomal protein S6 ki 100.0 2.2E-29 7.6E-34 253.4 16.6 167 400-580 16-187 (325)
85 3tt0_A Basic fibroblast growth 100.0 2.4E-29 8.4E-34 259.1 17.3 183 394-580 68-271 (382)
86 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-29 6.5E-34 256.4 16.2 174 393-580 51-228 (349)
87 3dls_A PAS domain-containing s 100.0 7.4E-30 2.5E-34 258.0 12.9 178 392-579 21-206 (335)
88 2a2a_A Death-associated protei 100.0 4.1E-29 1.4E-33 251.2 18.3 178 393-580 10-196 (321)
89 1x8b_A WEE1HU, WEE1-like prote 100.0 7.4E-29 2.5E-33 245.0 19.4 176 393-577 9-205 (289)
90 2izr_A Casein kinase I isoform 100.0 2.1E-29 7.2E-34 254.4 15.7 175 394-580 8-195 (330)
91 3vhe_A Vascular endothelial gr 100.0 9.2E-30 3.1E-34 260.1 13.2 190 387-580 14-273 (359)
92 4euu_A Serine/threonine-protei 100.0 4E-29 1.4E-33 251.1 17.3 174 394-575 8-188 (319)
93 2nru_A Interleukin-1 receptor- 100.0 1.2E-28 4.2E-33 246.1 20.6 188 383-576 13-209 (307)
94 3qup_A Tyrosine-protein kinase 100.0 1.9E-29 6.6E-34 253.8 14.8 185 393-580 21-217 (323)
95 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-29 6E-34 277.6 15.6 179 393-580 339-520 (674)
96 3lb7_A RAF proto-oncogene seri 100.0 4.3E-29 1.5E-33 249.2 17.1 172 394-575 35-207 (307)
97 1vzo_A Ribosomal protein S6 ki 100.0 7.3E-30 2.5E-34 260.2 11.7 175 395-577 54-235 (355)
98 3l9p_A Anaplastic lymphoma kin 100.0 1E-29 3.5E-34 260.3 12.6 183 394-580 70-264 (367)
99 3ugc_A Tyrosine-protein kinase 100.0 1.1E-29 3.9E-34 252.0 12.6 178 394-580 9-195 (295)
100 1mp8_A Focal adhesion kinase 1 100.0 9.7E-30 3.3E-34 250.7 11.9 177 394-579 14-194 (281)
101 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.3E-29 4.6E-34 255.6 13.0 177 392-578 31-213 (329)
102 3dbq_A Dual specificity protei 100.0 2.1E-29 7.3E-34 255.7 14.5 173 394-576 8-183 (343)
103 3q4u_A Activin receptor type-1 100.0 3.6E-29 1.2E-33 249.1 15.6 170 393-577 6-192 (301)
104 1qcf_A Haematopoetic cell kina 100.0 1.5E-29 5.3E-34 266.4 13.6 177 393-579 186-362 (454)
105 3g33_A Cell division protein k 100.0 6.9E-29 2.4E-33 248.0 17.5 179 393-580 7-197 (308)
106 3is5_A Calcium-dependent prote 100.0 6.8E-29 2.3E-33 245.2 17.2 176 394-576 21-200 (285)
107 3lm5_A Serine/threonine-protei 100.0 3E-29 1E-33 252.8 14.8 186 387-580 20-211 (327)
108 3kfa_A Tyrosine-protein kinase 100.0 2E-29 6.8E-34 249.3 13.3 177 394-579 12-189 (288)
109 3t9t_A Tyrosine-protein kinase 100.0 2.1E-29 7.3E-34 246.2 13.3 175 395-579 8-182 (267)
110 2rku_A Serine/threonine-protei 100.0 1.1E-28 3.8E-33 244.8 18.5 177 394-579 14-192 (294)
111 2h34_A Serine/threonine-protei 100.0 4.9E-29 1.7E-33 249.2 15.9 178 394-579 33-212 (309)
112 3cbl_A C-FES, proto-oncogene t 100.0 8.1E-30 2.8E-34 262.1 10.5 177 394-578 113-291 (377)
113 2eue_A Carbon catabolite derep 100.0 5.9E-29 2E-33 244.3 16.1 174 395-579 13-188 (275)
114 1cm8_A Phosphorylated MAP kina 100.0 3.6E-29 1.2E-33 256.1 15.1 169 394-576 24-199 (367)
115 2x4f_A Myosin light chain kina 100.0 5.8E-29 2E-33 254.9 16.7 171 398-579 92-265 (373)
116 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-29 5.2E-34 269.1 12.7 177 394-579 219-396 (495)
117 3cok_A Serine/threonine-protei 100.0 5E-29 1.7E-33 245.2 15.4 178 394-579 10-189 (278)
118 3mwu_A Calmodulin-domain prote 100.0 4E-29 1.4E-33 265.8 15.8 174 393-576 20-197 (486)
119 3hko_A Calcium/calmodulin-depe 100.0 2.4E-29 8.1E-34 255.6 13.4 183 391-576 22-248 (345)
120 3fdn_A Serine/threonine-protei 100.0 4.7E-29 1.6E-33 245.5 15.0 175 394-579 8-184 (279)
121 2zmd_A Dual specificity protei 100.0 4.8E-29 1.6E-33 257.3 15.7 172 395-576 56-230 (390)
122 3f3z_A Calcium/calmodulin-depe 100.0 9.2E-29 3.1E-33 243.1 16.9 173 393-577 7-183 (277)
123 2owb_A Serine/threonine-protei 100.0 9.5E-29 3.2E-33 250.0 17.3 177 394-579 40-218 (335)
124 1nxk_A MAP kinase-activated pr 100.0 9.4E-29 3.2E-33 255.9 17.7 172 394-580 60-241 (400)
125 2ivs_A Proto-oncogene tyrosine 100.0 3.1E-29 1.1E-33 251.1 13.6 181 394-578 22-228 (314)
126 4aaa_A Cyclin-dependent kinase 100.0 6.8E-29 2.3E-33 250.7 16.1 175 394-577 24-199 (331)
127 2w5a_A Serine/threonine-protei 100.0 4.7E-29 1.6E-33 245.5 14.5 181 394-579 5-193 (279)
128 1ogq_A PGIP-2, polygalacturona 100.0 3.3E-30 1.1E-34 258.0 6.3 242 1-259 59-310 (313)
129 2qr7_A Ribosomal protein S6 ki 100.0 3.8E-29 1.3E-33 253.2 13.8 171 392-577 19-195 (342)
130 4e5w_A Tyrosine-protein kinase 100.0 4.1E-29 1.4E-33 248.8 13.9 176 395-578 21-205 (302)
131 1qpc_A LCK kinase; alpha beta 100.0 6.5E-29 2.2E-33 244.5 15.0 175 394-578 12-186 (279)
132 3mdy_A Bone morphogenetic prot 100.0 1.4E-28 4.7E-33 249.0 17.8 180 388-579 30-223 (337)
133 3bhy_A Death-associated protei 100.0 1.3E-28 4.5E-33 242.8 17.2 176 394-579 4-188 (283)
134 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.6E-29 1.2E-33 263.4 14.0 176 394-579 183-358 (452)
135 1rjb_A FL cytokine receptor; k 100.0 5.2E-29 1.8E-33 253.0 14.6 182 394-579 44-251 (344)
136 3i6u_A CDS1, serine/threonine- 100.0 1.3E-28 4.4E-33 256.6 17.8 174 392-576 132-315 (419)
137 1t46_A HOMO sapiens V-KIT hard 100.0 6.7E-29 2.3E-33 248.6 15.1 182 394-579 22-224 (313)
138 2xrw_A Mitogen-activated prote 100.0 1.3E-28 4.6E-33 252.5 17.6 174 394-580 24-204 (371)
139 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-28 5E-33 258.6 18.1 172 394-580 192-364 (450)
140 2wqm_A Serine/threonine-protei 100.0 2.5E-28 8.5E-33 244.2 18.7 182 394-580 31-214 (310)
141 3lij_A Calcium/calmodulin depe 100.0 7.6E-29 2.6E-33 264.1 15.8 174 393-576 35-212 (494)
142 2yex_A Serine/threonine-protei 100.0 1.6E-28 5.5E-33 241.2 16.7 178 393-579 5-184 (276)
143 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-28 6.4E-33 261.8 18.4 174 393-576 34-222 (504)
144 3kmu_A ILK, integrin-linked ki 100.0 6.1E-29 2.1E-33 243.4 13.3 171 395-578 10-184 (271)
145 3nyv_A Calmodulin-domain prote 100.0 8.2E-29 2.8E-33 263.4 15.3 174 393-576 24-202 (484)
146 1u5q_A Serine/threonine protei 100.0 1.5E-28 5.2E-33 249.5 16.4 168 395-575 54-223 (348)
147 4fvq_A Tyrosine-protein kinase 100.0 1E-28 3.5E-33 244.3 14.7 169 394-576 7-191 (289)
148 3poz_A Epidermal growth factor 100.0 6.4E-29 2.2E-33 250.4 13.4 177 395-580 15-197 (327)
149 1p4o_A Insulin-like growth fac 100.0 5.1E-29 1.7E-33 250.6 12.5 184 392-579 22-217 (322)
150 1ua2_A CAK, cell division prot 100.0 1.5E-28 5.1E-33 249.8 15.9 177 392-577 7-187 (346)
151 3a7i_A MST3 kinase, serine/thr 100.0 3.3E-28 1.1E-32 242.4 18.1 174 395-579 22-196 (303)
152 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-28 4.3E-33 243.8 14.9 172 394-575 23-195 (289)
153 2vgo_A Serine/threonine-protei 100.0 1.6E-28 5.3E-33 242.5 15.4 175 394-579 13-189 (284)
154 2pvf_A Fibroblast growth facto 100.0 1.2E-28 4.2E-33 249.2 14.9 181 394-578 34-235 (334)
155 1t4h_A Serine/threonine-protei 100.0 3.2E-28 1.1E-32 241.0 17.6 170 396-576 27-204 (290)
156 3mi9_A Cell division protein k 100.0 1.6E-28 5.5E-33 250.1 15.9 175 395-577 17-203 (351)
157 1csn_A Casein kinase-1; phosph 100.0 3.2E-28 1.1E-32 241.8 17.7 176 393-580 8-196 (298)
158 3dtc_A Mitogen-activated prote 100.0 1.1E-28 3.8E-33 241.7 14.0 173 394-579 6-191 (271)
159 3eqc_A Dual specificity mitoge 100.0 7.2E-29 2.5E-33 253.6 13.2 176 394-580 32-208 (360)
160 3lxp_A Non-receptor tyrosine-p 100.0 1.9E-28 6.4E-33 246.0 15.8 172 397-578 33-213 (318)
161 2h6d_A 5'-AMP-activated protei 100.0 2.8E-28 9.5E-33 239.5 16.6 176 394-579 10-187 (276)
162 2r3i_A Cell division protein k 100.0 2.2E-28 7.5E-33 243.2 15.9 176 395-578 3-179 (299)
163 2fst_X Mitogen-activated prote 100.0 1E-28 3.6E-33 252.5 13.7 169 394-576 28-203 (367)
164 3kex_A Receptor tyrosine-prote 100.0 7.7E-29 2.6E-33 249.6 12.5 177 395-580 13-195 (325)
165 2a19_B Interferon-induced, dou 100.0 1.5E-28 5.2E-33 242.3 14.3 173 393-579 9-198 (284)
166 2jam_A Calcium/calmodulin-depe 100.0 2.7E-28 9.4E-33 243.2 16.2 175 393-580 7-185 (304)
167 3mtl_A Cell division protein k 100.0 6.5E-29 2.2E-33 250.0 11.8 173 395-577 2-175 (324)
168 3fme_A Dual specificity mitoge 100.0 2.4E-28 8.2E-33 241.8 15.6 174 394-574 6-181 (290)
169 3pg1_A Mitogen-activated prote 100.0 2.6E-28 8.8E-33 249.7 16.3 181 386-576 13-207 (362)
170 2y7j_A Phosphorylase B kinase 100.0 4E-28 1.4E-32 248.3 17.4 179 387-575 86-272 (365)
171 3brb_A Proto-oncogene tyrosine 100.0 2.2E-28 7.4E-33 245.0 15.2 184 393-579 32-226 (313)
172 1zy4_A Serine/threonine-protei 100.0 3.5E-28 1.2E-32 241.9 16.4 175 393-577 4-205 (303)
173 1mqb_A Ephrin type-A receptor 100.0 3E-28 1E-32 246.2 16.1 178 395-580 44-228 (333)
174 2h8h_A Proto-oncogene tyrosine 100.0 7.4E-29 2.5E-33 266.2 12.3 176 394-579 266-441 (535)
175 4eut_A Serine/threonine-protei 100.0 2.2E-28 7.5E-33 253.1 15.3 175 394-576 8-189 (396)
176 2i1m_A Macrophage colony-stimu 100.0 2E-28 6.7E-33 247.6 14.5 182 394-579 45-243 (333)
177 3cc6_A Protein tyrosine kinase 100.0 2.2E-28 7.6E-33 240.9 14.5 177 394-579 11-191 (281)
178 3op5_A Serine/threonine-protei 100.0 9.8E-29 3.4E-33 252.9 12.2 179 394-580 34-239 (364)
179 4f0f_A Serine/threonine-protei 100.0 5.2E-28 1.8E-32 239.0 17.0 169 395-576 19-200 (287)
180 2xir_A Vascular endothelial gr 100.0 2.1E-28 7.2E-33 245.3 14.4 188 388-579 20-227 (316)
181 3eb0_A Putative uncharacterize 100.0 5E-28 1.7E-32 249.4 17.5 174 392-578 4-217 (383)
182 2eva_A TAK1 kinase - TAB1 chim 100.0 2.2E-28 7.6E-33 244.2 14.4 173 395-580 8-181 (307)
183 3lxl_A Tyrosine-protein kinase 100.0 2.7E-28 9.1E-33 246.0 14.9 175 395-578 23-206 (327)
184 3gxj_A TGF-beta receptor type- 100.0 2.7E-29 9.3E-34 250.2 7.5 172 394-577 2-187 (303)
185 3byv_A Rhoptry kinase; malaria 100.0 4.6E-29 1.6E-33 256.6 9.3 175 394-577 72-277 (377)
186 3f66_A Hepatocyte growth facto 100.0 3.3E-28 1.1E-32 241.9 15.0 177 395-579 25-209 (298)
187 1b6c_B TGF-B superfamily recep 100.0 7.7E-28 2.6E-32 244.1 17.8 179 387-577 34-226 (342)
188 3com_A Serine/threonine-protei 100.0 6.2E-28 2.1E-32 241.8 16.6 176 392-579 26-202 (314)
189 2ac3_A MAP kinase-interacting 100.0 6E-28 2E-32 242.1 16.4 173 394-576 11-195 (316)
190 3pls_A Macrophage-stimulating 100.0 6.9E-28 2.4E-32 239.5 16.4 177 396-580 22-206 (298)
191 1u59_A Tyrosine-protein kinase 100.0 5.4E-28 1.8E-32 239.0 15.4 175 395-578 9-189 (287)
192 2buj_A Serine/threonine-protei 100.0 6.8E-28 2.3E-32 241.8 16.3 178 394-577 28-218 (317)
193 3g2f_A Bone morphogenetic prot 100.0 3.8E-28 1.3E-32 245.7 14.5 168 394-576 12-202 (336)
194 2ycf_A Serine/threonine-protei 100.0 5.2E-28 1.8E-32 243.3 15.4 172 393-575 8-189 (322)
195 3qyz_A Mitogen-activated prote 100.0 7.1E-28 2.4E-32 246.5 16.3 173 394-577 26-206 (364)
196 3kvw_A DYRK2, dual specificity 100.0 9E-28 3.1E-32 250.9 17.4 174 393-580 95-277 (429)
197 4exu_A Mitogen-activated prote 100.0 5.9E-28 2E-32 247.7 15.7 169 393-576 40-215 (371)
198 3an0_A Dual specificity mitoge 100.0 6.8E-28 2.3E-32 244.3 15.8 177 393-576 49-227 (340)
199 3nsz_A CK II alpha, casein kin 100.0 1.2E-27 4.2E-32 241.4 17.4 164 395-576 36-204 (330)
200 1blx_A Cyclin-dependent kinase 100.0 7.9E-28 2.7E-32 242.3 16.0 179 393-580 9-197 (326)
201 2pml_X PFPK7, Ser/Thr protein 100.0 4.1E-28 1.4E-32 246.7 13.9 178 394-577 30-225 (348)
202 3c1x_A Hepatocyte growth facto 100.0 2.5E-28 8.6E-33 250.1 12.3 176 396-579 90-273 (373)
203 2x7f_A TRAF2 and NCK-interacti 100.0 4.2E-28 1.4E-32 244.4 13.6 175 391-575 20-202 (326)
204 1xbb_A Tyrosine-protein kinase 99.9 3.9E-28 1.3E-32 240.5 13.0 175 395-578 16-196 (291)
205 3lzb_A Epidermal growth factor 99.9 3.8E-28 1.3E-32 244.6 13.0 177 395-580 15-197 (327)
206 1fvr_A Tyrosine-protein kinase 99.9 3.7E-28 1.3E-32 244.9 12.8 178 395-578 25-217 (327)
207 2wei_A Calmodulin-domain prote 99.9 1.1E-27 3.6E-32 236.9 15.6 177 391-577 18-198 (287)
208 4fl3_A Tyrosine-protein kinase 99.9 5.2E-28 1.8E-32 264.1 14.3 171 401-580 375-550 (635)
209 2wtk_C Serine/threonine-protei 99.9 1.4E-27 4.9E-32 238.0 16.3 178 393-577 3-186 (305)
210 1phk_A Phosphorylase kinase; g 99.9 1.8E-27 6.3E-32 236.4 16.9 174 392-575 14-196 (298)
211 2v62_A Serine/threonine-protei 99.9 2.6E-28 9E-33 247.8 11.0 178 394-580 36-238 (345)
212 2jii_A Serine/threonine-protei 99.9 3.8E-28 1.3E-32 247.4 12.0 172 395-580 42-246 (352)
213 3rgf_A Cyclin-dependent kinase 99.9 7.8E-28 2.7E-32 249.9 14.6 177 394-578 19-211 (405)
214 2w1i_A JAK2; chromosomal rearr 99.9 7.3E-28 2.5E-32 242.6 13.9 176 394-578 40-224 (326)
215 2ozo_A Tyrosine-protein kinase 99.9 7.5E-28 2.5E-32 262.2 15.0 176 396-580 336-517 (613)
216 4azs_A Methyltransferase WBDD; 99.9 2.4E-28 8.2E-33 262.9 11.0 164 402-577 241-414 (569)
217 1j1b_A Glycogen synthase kinas 99.9 1.6E-27 5.6E-32 248.3 16.9 170 395-577 54-231 (420)
218 2vwi_A Serine/threonine-protei 99.9 2.5E-28 8.7E-33 243.1 10.0 179 394-576 14-200 (303)
219 2yfx_A Tyrosine-protein kinase 99.9 5.9E-28 2E-32 243.4 12.6 182 394-579 29-222 (327)
220 4e7w_A Glycogen synthase kinas 99.9 1.5E-27 5.2E-32 246.5 16.0 171 394-577 39-216 (394)
221 2j7t_A Serine/threonine-protei 99.9 5.7E-28 1.9E-32 240.6 12.3 172 393-574 17-189 (302)
222 2b9h_A MAP kinase FUS3, mitoge 99.9 2.1E-27 7E-32 242.1 16.5 173 393-576 9-196 (353)
223 1z57_A Dual specificity protei 99.9 3E-27 1E-31 239.2 17.4 174 393-580 12-212 (339)
224 3coi_A Mitogen-activated prote 99.9 1.5E-27 5.1E-32 243.2 15.3 168 394-576 23-197 (353)
225 2clq_A Mitogen-activated prote 99.9 2.6E-27 8.9E-32 234.9 16.4 174 396-577 23-198 (295)
226 3aln_A Dual specificity mitoge 99.9 2.2E-27 7.5E-32 239.2 16.0 175 394-575 21-198 (327)
227 3ll6_A Cyclin G-associated kin 99.9 2.6E-27 8.9E-32 239.5 16.5 172 395-574 28-222 (337)
228 1byg_A CSK, protein (C-termina 99.9 9.9E-28 3.4E-32 235.9 13.0 171 394-579 20-191 (278)
229 3uzp_A CKI-delta, CKID, casein 99.9 4.9E-27 1.7E-31 233.1 18.1 176 393-580 7-193 (296)
230 4hgt_A Casein kinase I isoform 99.9 4.4E-27 1.5E-31 233.3 17.7 176 393-580 7-193 (296)
231 1wak_A Serine/threonine-protei 99.9 1.7E-27 5.7E-32 246.7 15.0 174 393-580 35-271 (397)
232 3q60_A ROP5B; pseudokinase, tr 99.9 8.9E-28 3E-32 246.5 12.7 170 395-576 62-265 (371)
233 3e3p_A Protein kinase, putativ 99.9 2.7E-27 9.3E-32 241.8 16.1 180 389-578 17-207 (360)
234 3cek_A Dual specificity protei 99.9 9.1E-28 3.1E-32 240.5 12.0 174 393-576 26-202 (313)
235 2j0j_A Focal adhesion kinase 1 99.9 1.7E-27 6E-32 260.9 15.0 178 393-579 388-569 (656)
236 3a99_A Proto-oncogene serine/t 99.9 9.9E-28 3.4E-32 241.0 10.5 180 388-578 36-224 (320)
237 3sv0_A Casein kinase I-like; t 99.9 1.1E-26 3.9E-31 244.8 18.8 176 393-580 5-191 (483)
238 2pzi_A Probable serine/threoni 99.9 1.9E-27 6.4E-32 263.1 13.4 167 394-577 79-252 (681)
239 2vx3_A Dual specificity tyrosi 99.9 5.6E-27 1.9E-31 241.5 15.8 178 391-580 50-236 (382)
240 2i6l_A Mitogen-activated prote 99.9 6.2E-27 2.1E-31 234.9 15.7 172 393-576 9-198 (320)
241 2iwi_A Serine/threonine-protei 99.9 9.5E-28 3.3E-32 240.2 9.6 178 390-578 26-214 (312)
242 3rgz_A Protein brassinosteroid 99.9 1E-27 3.5E-32 269.0 10.3 250 2-253 404-717 (768)
243 1u46_A ACK-1, activated CDC42 99.9 2.4E-27 8E-32 234.7 11.7 176 395-578 18-200 (291)
244 2eu9_A Dual specificity protei 99.9 1.4E-26 4.7E-31 236.0 17.1 174 393-580 17-217 (355)
245 3fhr_A MAP kinase-activated pr 99.9 7.5E-27 2.5E-31 236.1 14.8 171 393-578 26-205 (336)
246 2rio_A Serine/threonine-protei 99.9 7.6E-27 2.6E-31 244.3 13.1 173 395-576 15-206 (434)
247 2y4i_B KSR2, HKSR2, kinase sup 99.9 2E-27 6.7E-32 238.6 8.1 174 393-576 31-208 (319)
248 1q8y_A SR protein kinase; tran 99.9 1.2E-26 4E-31 238.3 13.2 172 395-580 19-213 (373)
249 3qa8_A MGC80376 protein; kinas 99.9 5.6E-27 1.9E-31 252.6 11.1 178 395-580 14-201 (676)
250 2dyl_A Dual specificity mitoge 99.9 1.9E-26 6.6E-31 231.2 14.2 172 394-575 24-197 (318)
251 3p23_A Serine/threonine-protei 99.9 1.8E-26 6.1E-31 240.9 13.9 169 395-576 24-200 (432)
252 3v47_A TOLL-like receptor 5B a 99.9 1.2E-25 4E-30 237.3 18.4 130 2-133 40-175 (455)
253 4fcg_A Uncharacterized protein 99.9 2.7E-26 9.1E-31 231.0 12.2 209 18-242 81-299 (328)
254 1ogq_A PGIP-2, polygalacturona 99.9 5.3E-27 1.8E-31 234.7 6.2 217 2-235 87-307 (313)
255 3zyi_A Leucine-rich repeat-con 99.9 1.8E-25 6.1E-30 235.6 17.9 235 6-258 67-308 (452)
256 3zyj_A Leucine-rich repeat-con 99.9 2.1E-25 7.1E-30 234.2 18.2 234 6-258 56-297 (440)
257 2id5_A Lingo-1, leucine rich r 99.9 1.8E-26 6.3E-31 245.0 9.3 255 2-258 42-338 (477)
258 3en9_A Glycoprotease, O-sialog 99.9 3.4E-26 1.2E-30 244.7 9.0 160 398-576 339-510 (540)
259 1ozn_A Reticulon 4 receptor; N 99.9 2.6E-25 9E-30 219.4 14.2 213 6-258 24-243 (285)
260 3uqc_A Probable conserved tran 99.9 1.3E-24 4.4E-29 214.3 15.7 145 394-548 30-176 (286)
261 2z66_A Variable lymphocyte rec 99.9 4.3E-25 1.5E-29 220.2 11.1 235 6-258 20-266 (306)
262 3j0a_A TOLL-like receptor 5; m 99.9 4.4E-25 1.5E-29 250.2 11.9 91 167-259 475-566 (844)
263 4eco_A Uncharacterized protein 99.9 1.2E-24 4.1E-29 238.7 14.3 241 2-254 340-601 (636)
264 3dzo_A Rhoptry kinase domain; 99.9 8E-25 2.7E-29 227.4 10.3 171 395-574 78-279 (413)
265 3m2w_A MAP kinase-activated pr 99.9 1.1E-23 3.9E-28 209.2 17.2 147 394-553 16-172 (299)
266 2z62_A TOLL-like receptor 4, v 99.9 4.6E-24 1.6E-28 209.4 14.2 212 6-257 20-241 (276)
267 1xku_A Decorin; proteoglycan, 99.9 1.7E-23 5.9E-28 210.9 18.6 214 20-237 54-280 (330)
268 2ft3_A Biglycan; proteoglycan, 99.9 2.1E-23 7E-28 210.6 19.1 230 3-254 65-308 (332)
269 1ozn_A Reticulon 4 receptor; N 99.9 4.4E-24 1.5E-28 210.6 13.3 198 2-237 42-242 (285)
270 4fcg_A Uncharacterized protein 99.9 2.5E-24 8.5E-29 216.6 11.7 214 2-233 91-314 (328)
271 3t6q_A CD180 antigen; protein- 99.9 4.9E-24 1.7E-28 233.3 14.3 253 2-258 288-565 (606)
272 4g8a_A TOLL-like receptor 4; l 99.9 4.3E-24 1.5E-28 234.7 13.5 91 168-258 490-585 (635)
273 4ecn_A Leucine-rich repeat pro 99.9 2E-24 7E-29 241.5 10.3 190 34-238 440-662 (876)
274 1p9a_G Platelet glycoprotein I 99.9 1.2E-23 4E-28 207.7 14.6 201 15-257 7-212 (290)
275 4eco_A Uncharacterized protein 99.9 6.3E-25 2.1E-29 240.9 5.8 230 2-238 193-474 (636)
276 4ecn_A Leucine-rich repeat pro 99.9 3.2E-24 1.1E-28 239.9 11.4 244 2-252 525-818 (876)
277 2o6q_A Variable lymphocyte rec 99.9 8.4E-23 2.9E-27 199.7 19.0 197 21-257 19-222 (270)
278 1zar_A RIO2 kinase; serine kin 99.9 1.2E-23 3.9E-28 206.5 12.7 153 389-575 84-252 (282)
279 3oja_B Anopheles plasmodium-re 99.9 2.1E-23 7.2E-28 227.4 14.7 226 4-233 62-314 (597)
280 1p9a_G Platelet glycoprotein I 99.9 4.9E-23 1.7E-27 203.3 15.3 186 6-234 23-209 (290)
281 2o6q_A Variable lymphocyte rec 99.9 1.1E-22 3.6E-27 199.0 17.5 194 3-237 27-222 (270)
282 1ziw_A TOLL-like receptor 3; i 99.9 3.1E-23 1.1E-27 230.0 15.4 230 18-261 381-631 (680)
283 2z80_A TOLL-like receptor 2, v 99.9 6E-24 2E-28 216.4 8.4 232 6-257 44-318 (353)
284 3v47_A TOLL-like receptor 5B a 99.9 3.7E-23 1.3E-27 218.1 14.7 242 2-258 64-413 (455)
285 3o6n_A APL1; leucine-rich repe 99.9 1.3E-23 4.6E-28 216.9 10.4 226 5-234 57-309 (390)
286 3vq2_A TLR4, TOLL-like recepto 99.9 1.5E-23 5E-28 229.5 10.5 209 37-260 345-565 (606)
287 3rfs_A Internalin B, repeat mo 99.9 1.3E-22 4.3E-27 198.7 15.2 184 16-238 39-223 (272)
288 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 1.3E-22 4.4E-27 219.8 16.9 89 168-258 399-515 (562)
289 3oja_B Anopheles plasmodium-re 99.9 5E-23 1.7E-27 224.4 11.8 214 17-234 50-292 (597)
290 1xku_A Decorin; proteoglycan, 99.9 3.8E-22 1.3E-26 201.1 17.4 227 19-253 32-276 (330)
291 2z62_A TOLL-like receptor 4, v 99.9 1.3E-22 4.5E-27 199.0 13.6 201 2-238 38-242 (276)
292 2z7x_B TOLL-like receptor 1, v 99.9 2.1E-22 7.2E-27 216.1 15.1 97 2-102 31-128 (520)
293 3t6q_A CD180 antigen; protein- 99.9 2.1E-22 7.3E-27 220.3 15.1 238 2-253 43-338 (606)
294 2z80_A TOLL-like receptor 2, v 99.9 3.8E-23 1.3E-27 210.5 8.5 219 2-237 62-318 (353)
295 2ft3_A Biglycan; proteoglycan, 99.9 3.1E-22 1E-26 202.0 14.8 223 7-253 47-277 (332)
296 3o6n_A APL1; leucine-rich repe 99.9 1.1E-22 3.7E-27 210.0 11.7 234 16-253 43-308 (390)
297 2id5_A Lingo-1, leucine rich r 99.9 5.2E-23 1.8E-27 218.4 9.5 254 2-257 66-360 (477)
298 1wwl_A Monocyte differentiatio 99.9 9.2E-24 3.2E-28 211.1 3.3 230 2-253 53-309 (312)
299 3m19_A Variable lymphocyte rec 99.9 1.3E-21 4.3E-26 189.2 17.7 176 23-237 19-196 (251)
300 3vq2_A TLR4, TOLL-like recepto 99.9 3.1E-22 1.1E-26 218.9 14.9 135 2-138 42-179 (606)
301 3j0a_A TOLL-like receptor 5; m 99.9 1.6E-22 5.5E-27 229.2 13.0 133 1-135 33-171 (844)
302 2z66_A Variable lymphocyte rec 99.9 2.1E-22 7E-27 200.8 11.0 218 2-235 38-263 (306)
303 3rfs_A Internalin B, repeat mo 99.9 1.2E-21 4.2E-26 191.6 15.9 200 17-257 18-222 (272)
304 3zyi_A Leucine-rich repeat-con 99.9 4.2E-22 1.4E-26 209.7 13.4 217 1-234 84-304 (452)
305 1wwl_A Monocyte differentiatio 99.9 8.2E-23 2.8E-27 204.2 6.9 205 16-235 93-311 (312)
306 3zyj_A Leucine-rich repeat-con 99.9 6.5E-22 2.2E-26 207.6 14.0 215 2-233 74-292 (440)
307 3oja_A Leucine-rich immune mol 99.9 3.1E-22 1.1E-26 212.2 10.5 215 17-256 33-253 (487)
308 3m19_A Variable lymphocyte rec 99.9 4.6E-21 1.6E-25 185.2 17.3 176 42-255 14-194 (251)
309 2xwt_C Thyrotropin receptor; s 99.9 7.3E-22 2.5E-26 189.3 10.8 191 5-238 23-223 (239)
310 1ziw_A TOLL-like receptor 3; i 99.9 2.4E-21 8.3E-26 214.8 16.5 226 2-240 35-292 (680)
311 2z63_A TOLL-like receptor 4, v 99.9 5.3E-22 1.8E-26 215.4 10.1 238 3-258 269-536 (570)
312 4glp_A Monocyte differentiatio 99.9 6.8E-22 2.3E-26 197.4 9.9 198 20-253 93-307 (310)
313 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 2.9E-21 1E-25 209.1 15.4 117 2-126 41-160 (562)
314 3o53_A Protein LRIM1, AGAP0063 99.9 4E-22 1.4E-26 199.7 7.8 216 16-256 32-253 (317)
315 3oja_A Leucine-rich immune mol 99.9 1.5E-22 5E-27 214.7 4.6 215 1-241 43-259 (487)
316 2z7x_B TOLL-like receptor 1, v 99.8 8.4E-22 2.9E-26 211.4 9.5 243 2-252 10-411 (520)
317 2xwt_C Thyrotropin receptor; s 99.8 3.5E-21 1.2E-25 184.6 10.6 186 2-231 41-237 (239)
318 2z81_A CD282 antigen, TOLL-lik 99.8 4.2E-21 1.4E-25 207.4 10.4 191 20-257 312-514 (549)
319 3o53_A Protein LRIM1, AGAP0063 99.8 1.8E-21 6E-26 195.0 6.6 213 2-240 44-258 (317)
320 4glp_A Monocyte differentiatio 99.8 3.8E-21 1.3E-25 191.9 8.0 195 1-234 100-308 (310)
321 1h6u_A Internalin H; cell adhe 99.8 1.9E-20 6.4E-25 186.6 12.9 190 15-252 38-229 (308)
322 1zth_A RIO1 serine protein kin 99.8 2E-20 6.8E-25 181.3 11.6 141 396-553 48-221 (258)
323 4fmz_A Internalin; leucine ric 99.8 7.6E-20 2.6E-24 185.5 14.8 215 15-254 107-325 (347)
324 3bz5_A Internalin-J, INLJ; leu 99.8 5.4E-20 1.9E-24 193.2 14.1 187 15-234 39-226 (457)
325 2o6s_A Variable lymphocyte rec 99.8 5.7E-20 1.9E-24 172.1 12.4 172 25-242 14-187 (208)
326 3cvr_A Invasion plasmid antige 99.8 6.9E-20 2.3E-24 196.0 13.8 184 19-240 60-250 (571)
327 4fmz_A Internalin; leucine ric 99.8 1.2E-19 4E-24 184.1 14.1 215 15-252 129-345 (347)
328 2v70_A SLIT-2, SLIT homolog 2 99.8 1.3E-19 4.6E-24 171.0 12.9 154 45-236 14-169 (220)
329 2z63_A TOLL-like receptor 4, v 99.8 1.1E-19 3.7E-24 197.2 13.9 235 2-251 38-336 (570)
330 2z81_A CD282 antigen, TOLL-lik 99.8 2.3E-20 8E-25 201.5 8.5 189 6-235 18-211 (549)
331 1jl5_A Outer protein YOPM; leu 99.8 1.1E-19 3.6E-24 190.9 13.0 217 2-251 21-268 (454)
332 1h6t_A Internalin B; cell adhe 99.8 6.5E-20 2.2E-24 181.0 10.7 171 16-234 44-214 (291)
333 2o6s_A Variable lymphocyte rec 99.8 6.7E-20 2.3E-24 171.6 10.0 178 6-234 20-199 (208)
334 3bz5_A Internalin-J, INLJ; leu 99.8 5.7E-19 1.9E-23 185.5 17.6 201 2-240 52-253 (457)
335 2v9t_B SLIT homolog 2 protein 99.8 3.2E-19 1.1E-23 168.4 14.0 133 42-233 32-165 (220)
336 1o6v_A Internalin A; bacterial 99.8 3.2E-19 1.1E-23 188.4 15.6 214 15-254 174-389 (466)
337 2xot_A Amphoterin-induced prot 99.8 6.9E-20 2.4E-24 186.8 10.1 155 43-257 40-206 (361)
338 3e6j_A Variable lymphocyte rec 99.8 6.5E-19 2.2E-23 167.5 14.6 154 45-237 22-176 (229)
339 1m9s_A Internalin B; cell inva 99.8 5E-19 1.7E-23 191.4 14.2 175 15-237 40-214 (605)
340 1o6v_A Internalin A; bacterial 99.8 8.1E-19 2.8E-23 185.4 14.8 195 15-235 196-390 (466)
341 1xeu_A Internalin C; cellular 99.8 3.3E-19 1.1E-23 173.2 9.4 173 15-236 16-188 (263)
342 2v70_A SLIT-2, SLIT homolog 2 99.8 8.7E-19 3E-23 165.4 11.8 153 67-258 13-171 (220)
343 1h6u_A Internalin H; cell adhe 99.8 1.1E-18 3.9E-23 173.6 13.1 189 17-253 18-208 (308)
344 4ay9_X Follicle-stimulating ho 99.8 4E-19 1.4E-23 180.3 9.9 193 7-240 23-222 (350)
345 1jl5_A Outer protein YOPM; leu 99.8 9.5E-18 3.2E-22 176.0 20.0 177 42-251 111-288 (454)
346 4g8a_A TOLL-like receptor 4; l 99.8 8.8E-19 3E-23 192.3 12.0 173 30-240 42-221 (635)
347 3g06_A SSPH2 (leucine-rich rep 99.8 1.4E-17 4.7E-22 180.4 20.6 103 7-127 54-156 (622)
348 2xot_A Amphoterin-induced prot 99.8 6.7E-19 2.3E-23 179.4 9.4 163 6-233 31-202 (361)
349 3e6j_A Variable lymphocyte rec 99.8 4.1E-18 1.4E-22 161.9 13.7 151 67-257 21-176 (229)
350 3g06_A SSPH2 (leucine-rich rep 99.8 1.1E-17 3.8E-22 181.1 18.0 111 2-129 71-198 (622)
351 2v9t_B SLIT homolog 2 protein 99.7 4.6E-18 1.6E-22 160.4 12.4 139 6-209 24-165 (220)
352 4ezg_A Putative uncharacterize 99.7 1.9E-18 6.5E-23 160.2 9.1 155 38-234 40-195 (197)
353 3cvr_A Invasion plasmid antige 99.7 7.4E-18 2.5E-22 180.3 14.7 180 37-254 49-244 (571)
354 1w8a_A SLIT protein; signaling 99.7 2.3E-17 7.9E-22 152.1 15.4 131 45-237 11-143 (192)
355 1h6t_A Internalin B; cell adhe 99.7 9E-18 3.1E-22 165.6 11.7 188 16-252 22-212 (291)
356 4gyi_A RIO2 kinase; protein ki 99.7 2.4E-18 8.3E-23 172.9 7.1 142 395-552 95-266 (397)
357 1m9s_A Internalin B; cell inva 99.7 7.9E-18 2.7E-22 182.0 11.0 188 16-252 19-209 (605)
358 2ca6_A RAN GTPase-activating p 99.7 2.2E-19 7.4E-24 185.0 -1.9 235 8-253 24-316 (386)
359 2ca6_A RAN GTPase-activating p 99.7 5E-19 1.7E-23 182.2 -0.9 213 16-237 61-320 (386)
360 3goz_A Leucine-rich repeat-con 99.7 2.4E-19 8.2E-24 182.9 -3.6 124 2-127 8-153 (362)
361 1xeu_A Internalin C; cellular 99.7 5.1E-18 1.7E-22 164.8 6.0 167 40-254 17-186 (263)
362 1dce_A Protein (RAB geranylger 99.7 1.4E-19 4.9E-24 194.5 -6.9 180 17-238 348-551 (567)
363 4b8c_D Glucose-repressible alc 99.7 4.4E-18 1.5E-22 188.5 1.6 144 34-215 216-360 (727)
364 4ay9_X Follicle-stimulating ho 99.7 1.1E-16 3.6E-21 162.5 11.0 209 2-255 40-260 (350)
365 1dce_A Protein (RAB geranylger 99.7 1.3E-18 4.3E-23 187.1 -3.7 174 6-227 362-567 (567)
366 2wfh_A SLIT homolog 2 protein 99.7 4.9E-16 1.7E-20 143.2 14.0 126 45-233 13-139 (193)
367 4b8c_D Glucose-repressible alc 99.7 1.8E-17 6.1E-22 183.7 5.1 184 8-236 216-407 (727)
368 1w8a_A SLIT protein; signaling 99.7 2.7E-16 9.2E-21 144.9 12.1 130 68-258 11-144 (192)
369 4ezg_A Putative uncharacterize 99.7 2E-16 6.9E-21 146.5 11.1 148 62-251 41-192 (197)
370 3goz_A Leucine-rich repeat-con 99.7 4.3E-18 1.5E-22 173.6 -0.3 125 2-128 32-183 (362)
371 2ast_B S-phase kinase-associat 99.7 2.5E-17 8.6E-22 166.1 4.8 195 22-231 51-258 (336)
372 2ast_B S-phase kinase-associat 99.7 7.5E-18 2.6E-22 169.9 -0.1 198 18-230 70-282 (336)
373 2ell_A Acidic leucine-rich nuc 99.7 2E-16 6.9E-21 142.5 9.3 131 40-233 22-160 (168)
374 2ell_A Acidic leucine-rich nuc 99.6 3.8E-16 1.3E-20 140.7 9.2 112 64-237 23-137 (168)
375 2o6r_A Variable lymphocyte rec 99.6 1.4E-15 4.8E-20 138.2 13.0 133 43-237 8-141 (177)
376 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.6E-20 140.3 11.4 128 68-258 13-144 (193)
377 2je0_A Acidic leucine-rich nuc 99.6 5.4E-16 1.8E-20 136.7 5.9 129 40-229 15-149 (149)
378 1a9n_A U2A', U2A'; complex (nu 99.6 5.8E-16 2E-20 140.6 6.1 134 37-234 14-154 (176)
379 2je0_A Acidic leucine-rich nuc 99.6 8.5E-16 2.9E-20 135.3 6.8 128 17-205 16-149 (149)
380 1ds9_A Outer arm dynein; leuci 99.6 3.3E-17 1.1E-21 151.9 -4.8 154 38-233 14-185 (198)
381 1z7x_W Ribonuclease inhibitor; 99.6 5.6E-17 1.9E-21 171.0 -5.2 226 18-252 142-410 (461)
382 1z7x_W Ribonuclease inhibitor; 99.5 7.4E-17 2.5E-21 170.1 -5.3 208 19-235 86-328 (461)
383 1a9n_A U2A', U2A'; complex (nu 99.5 3.5E-15 1.2E-19 135.4 6.4 130 15-209 16-153 (176)
384 2o6r_A Variable lymphocyte rec 99.5 4.2E-14 1.4E-18 128.4 12.2 128 23-213 12-141 (177)
385 1ds9_A Outer arm dynein; leuci 99.5 1.7E-16 5.9E-21 147.1 -8.4 152 18-209 18-185 (198)
386 3g39_A Variable lymphocyte rec 99.5 1.5E-13 5.2E-18 123.7 10.7 62 174-235 56-117 (170)
387 3g39_A Variable lymphocyte rec 99.4 3.6E-13 1.2E-17 121.2 11.1 107 43-211 10-117 (170)
388 2r9u_A Variable lymphocyte rec 99.4 3.7E-13 1.2E-17 121.6 11.0 59 45-105 15-73 (174)
389 2r9u_A Variable lymphocyte rec 99.4 3.4E-13 1.2E-17 121.8 10.2 107 67-236 14-121 (174)
390 3tm0_A Aminoglycoside 3'-phosp 99.4 3.3E-12 1.1E-16 123.7 12.4 147 391-550 10-213 (263)
391 3sb4_A Hypothetical leucine ri 99.3 1.7E-12 5.9E-17 130.1 6.8 56 173-229 227-283 (329)
392 2ifg_A High affinity nerve gro 99.3 4.5E-12 1.5E-16 128.1 9.1 102 24-126 14-117 (347)
393 2ifg_A High affinity nerve gro 99.3 8E-12 2.7E-16 126.3 10.0 60 173-233 57-116 (347)
394 3sb4_A Hypothetical leucine ri 99.3 6.9E-12 2.4E-16 125.7 8.1 63 173-237 251-314 (329)
395 1nd4_A Aminoglycoside 3'-phosp 99.3 8.1E-12 2.8E-16 120.7 8.3 139 395-551 20-215 (264)
396 3un9_A NLR family member X1; l 99.2 3E-13 1E-17 137.6 -7.3 162 41-234 71-253 (372)
397 3ogk_B Coronatine-insensitive 99.2 3.9E-13 1.3E-17 146.2 -7.1 201 16-228 110-326 (592)
398 3dxp_A Putative acyl-COA dehyd 99.1 3.9E-10 1.3E-14 114.4 10.7 143 399-550 42-248 (359)
399 3ogk_B Coronatine-insensitive 99.0 5.3E-12 1.8E-16 137.2 -4.8 106 16-122 162-280 (592)
400 2p1m_B Transport inhibitor res 98.9 2E-11 6.9E-16 132.6 -5.4 212 17-229 104-347 (594)
401 2p1m_B Transport inhibitor res 98.9 9.2E-12 3.2E-16 135.3 -9.2 61 172-233 432-494 (594)
402 3un9_A NLR family member X1; l 98.9 1.4E-11 4.7E-16 125.3 -8.2 185 17-233 71-283 (372)
403 4fdw_A Leucine rich hypothetic 98.9 9.1E-09 3.1E-13 105.5 12.0 195 11-230 131-333 (401)
404 4fdw_A Leucine rich hypothetic 98.9 9.6E-09 3.3E-13 105.3 11.9 204 11-234 153-359 (401)
405 3r70_A Aminoglycoside phosphot 98.8 6.1E-08 2.1E-12 96.4 13.3 137 396-551 38-238 (320)
406 2ra8_A Uncharacterized protein 98.7 1.2E-08 4.2E-13 102.7 6.3 63 172-234 252-321 (362)
407 3sg8_A APH(2'')-ID; antibiotic 98.7 7.2E-08 2.5E-12 95.1 10.7 137 400-551 25-224 (304)
408 4gkh_A Aminoglycoside 3'-phosp 98.6 4.2E-07 1.5E-11 87.9 13.3 136 402-551 31-224 (272)
409 3d1u_A Putative fructosamine-3 98.6 3.8E-07 1.3E-11 88.9 12.4 77 398-480 18-97 (288)
410 3tdw_A Gentamicin resistance p 98.5 9.8E-07 3.3E-11 87.0 14.4 137 400-551 24-225 (306)
411 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.9E-06 6.6E-11 86.9 14.2 77 397-481 43-122 (362)
412 3rw6_A Nuclear RNA export fact 98.4 2.1E-08 7.1E-13 95.9 -1.3 52 173-226 197-257 (267)
413 1io0_A Tropomodulin; LRR prote 98.3 2.4E-07 8.2E-12 84.0 3.5 61 173-233 94-164 (185)
414 3ats_A Putative uncharacterize 98.2 1.8E-06 6.3E-11 87.0 8.4 82 400-481 25-121 (357)
415 1io0_A Tropomodulin; LRR prote 98.2 1.8E-07 6.1E-12 84.9 -0.1 68 36-103 30-107 (185)
416 3rw6_A Nuclear RNA export fact 98.2 1E-06 3.5E-11 84.1 4.6 66 171-238 169-238 (267)
417 2q83_A YTAA protein; 2635576, 98.1 3.2E-05 1.1E-09 77.2 15.0 143 401-550 38-252 (346)
418 2olc_A MTR kinase, methylthior 98.0 1E-05 3.5E-10 82.8 7.9 77 400-478 35-120 (397)
419 2ra8_A Uncharacterized protein 98.0 4.7E-06 1.6E-10 83.8 4.6 64 171-234 218-293 (362)
420 3jr1_A Putative fructosamine-3 97.9 8.1E-05 2.8E-09 73.0 12.4 141 399-546 40-232 (312)
421 3f7w_A Putative fructosamine-3 97.8 0.00011 3.8E-09 71.4 11.2 79 396-480 16-97 (288)
422 2pyw_A Uncharacterized protein 97.6 0.00029 1E-08 72.5 11.5 75 400-477 39-122 (420)
423 2ppq_A HSK, HK, homoserine kin 97.6 0.00032 1.1E-08 69.3 11.1 158 388-550 10-217 (322)
424 4fs7_A Uncharacterized protein 97.6 0.00023 8E-09 72.5 10.1 151 37-230 225-376 (394)
425 4fs7_A Uncharacterized protein 97.5 0.00027 9.3E-09 72.0 10.2 173 17-233 161-355 (394)
426 4gt6_A Cell surface protein; l 97.5 0.00055 1.9E-08 69.7 11.2 110 84-233 260-370 (394)
427 3dxq_A Choline/ethanolamine ki 97.4 0.00035 1.2E-08 68.3 9.2 72 400-481 23-96 (301)
428 3csv_A Aminoglycoside phosphot 97.4 0.0005 1.7E-08 68.3 9.9 144 401-551 24-218 (333)
429 4gt6_A Cell surface protein; l 97.3 0.0018 6.2E-08 65.8 13.5 59 172-233 288-346 (394)
430 1zyl_A Hypothetical protein YI 97.2 0.0025 8.5E-08 62.9 12.8 144 401-550 32-223 (328)
431 1nw1_A Choline kinase (49.2 KD 97.2 0.00076 2.6E-08 69.4 9.0 73 400-480 78-159 (429)
432 3feg_A Choline/ethanolamine ki 97.2 0.0011 3.8E-08 66.7 9.4 144 400-550 55-254 (379)
433 2qg7_A Ethanolamine kinase PV0 97.2 0.0027 9.2E-08 65.7 12.5 74 400-480 113-188 (458)
434 4h09_A Hypothetical leucine ri 97.1 0.0025 8.6E-08 64.3 10.9 55 172-228 286-341 (379)
435 3rfe_A Platelet glycoprotein I 97.0 0.001 3.6E-08 55.8 6.5 55 45-102 11-68 (130)
436 3e4g_A ATP synthase subunit S, 96.9 0.00013 4.3E-09 64.6 -0.1 80 43-122 62-149 (176)
437 3c5i_A Choline kinase; choline 96.9 0.0014 4.9E-08 65.9 7.6 74 400-480 38-121 (369)
438 4h09_A Hypothetical leucine ri 96.8 0.0054 1.8E-07 61.9 10.3 141 36-219 211-355 (379)
439 3rfe_A Platelet glycoprotein I 96.7 0.0022 7.5E-08 53.8 6.0 51 176-229 12-64 (130)
440 3i1a_A Spectinomycin phosphotr 96.7 0.0062 2.1E-07 60.5 10.1 31 520-550 206-236 (339)
441 3e4g_A ATP synthase subunit S, 96.6 0.00064 2.2E-08 60.0 1.7 35 173-207 115-150 (176)
442 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00061 2.1E-08 61.4 0.6 59 173-231 99-168 (197)
443 3f2s_A CK, chetk-alpha, cholin 96.4 0.011 3.7E-07 59.8 9.6 147 400-550 57-280 (401)
444 1pgv_A TMD-1, tropomodulin TMD 96.2 0.00092 3.1E-08 60.2 0.4 87 38-124 37-138 (197)
445 3mes_A Choline kinase; malaria 96.0 0.021 7.3E-07 58.2 9.4 143 400-550 75-291 (424)
446 3g15_A CK, chetk-alpha, cholin 94.0 0.2 6.7E-06 50.8 9.9 29 522-550 246-280 (401)
447 4ano_A ESSB; membrane protein, 86.6 1.5 5.2E-05 39.7 7.1 86 451-551 48-134 (219)
448 3cxl_A N-chimerin; SH2, RHO-GA 85.8 0.083 2.8E-06 54.6 -2.0 63 398-463 145-214 (463)
449 4ann_A ESSB; membrane protein, 84.6 1.4 4.8E-05 39.8 5.7 87 451-552 43-130 (215)
450 2lz0_A Uncharacterized protein 42.2 68 0.0023 24.6 6.5 45 30-75 8-53 (100)
451 3ls8_A Phosphatidylinositol 3- 35.7 4.1E+02 0.014 27.9 13.2 86 456-549 402-501 (614)
452 1cja_A Protein (actin-fragmin 31.0 2.1E+02 0.0071 27.5 9.0 78 467-551 156-238 (342)
453 2x6h_A GH13170P, VPS34, phosph 23.3 41 0.0014 36.0 2.9 25 525-549 551-575 (696)
454 2lz0_A Uncharacterized protein 22.1 1E+02 0.0035 23.6 4.3 47 183-230 7-53 (100)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.6e-41 Score=335.73 Aligned_cols=179 Identities=23% Similarity=0.388 Sum_probs=153.2
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
++|++.+.||+|+||+||+|+.. +|+.||||++.+........+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999765 79999999998776666677889999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
||+||+|.+++.. .+...+++.+++.|+.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999854 233467899999999999999999998 8999999999999999999999999999987643
Q ss_pred CCCCccccccccCCccCccccCCCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.. ......+||+.|||||++.+.+|+
T Consensus 178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~ 203 (350)
T 4b9d_A 178 TV-ELARACIGTPYYLSPEICENKPYN 203 (350)
T ss_dssp HH-HHHHHHHSCCTTCCHHHHTTCCCC
T ss_pred Cc-ccccccCCCccccCHHHHCCCCCC
Confidence 21 123456899999999999998875
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.9e-40 Score=326.52 Aligned_cols=178 Identities=27% Similarity=0.438 Sum_probs=156.8
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
++|++.+.||+|+||+||+|+.. +++.||||++.+... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999765 799999999986533 2344678999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||++||+|.+++.+ ...+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 112 Ey~~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 99999999999854 2468999999999999999999998 899999999999999999999999999999775
Q ss_pred CCC-CCccccccccCCccCccccCCCCCC
Q 008026 553 EGK-GSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 553 ~~~-~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
... ......++||+.|||||++.+.+|+
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~ 212 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSAC 212 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBC
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCC
Confidence 432 2234557899999999999887764
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-39 Score=325.89 Aligned_cols=174 Identities=25% Similarity=0.416 Sum_probs=154.3
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
+.|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 56999999999999999999775 799999999976432 234568899999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
||++|+|.+++.. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+....
T Consensus 152 y~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 152 FLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp CCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999998843 358999999999999999999998 8999999999999999999999999999987754
Q ss_pred CCCCccccccccCCccCccccCCCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.. ......+||+.|||||++.+.+|+
T Consensus 223 ~~-~~~~~~~GTp~YmAPEvl~~~~y~ 248 (346)
T 4fih_A 223 EV-PRRKSLVGTPYWMAPELISRLPYG 248 (346)
T ss_dssp SS-CCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred CC-CcccccccCcCcCCHHHHCCCCCC
Confidence 43 234557899999999999988774
No 4
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=328.08 Aligned_cols=175 Identities=25% Similarity=0.414 Sum_probs=154.9
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.+.|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+++|++++|||||+++++|.+.+..|+||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 357999999999999999999775 799999999976432 33456889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
|||+||+|.+++.. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|+...
T Consensus 228 Ey~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 228 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp ECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 99999999998843 358999999999999999999998 899999999999999999999999999998775
Q ss_pred CCCCCccccccccCCccCccccCCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
... ......+||+.|||||++.+.+|+
T Consensus 299 ~~~-~~~~~~~GTp~YmAPEvl~~~~y~ 325 (423)
T 4fie_A 299 KEV-PRRKSLVGTPYWMAPELISRLPYG 325 (423)
T ss_dssp SSC-CCBCCCEECTTTCCHHHHTTCCBC
T ss_pred CCC-ccccccccCcCcCCHHHHCCCCCC
Confidence 443 234557899999999999988774
No 5
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8e-39 Score=310.63 Aligned_cols=174 Identities=29% Similarity=0.456 Sum_probs=139.0
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
++|++.+.||+|+||+||+|+.. +++.||+|++.+.... ......+.+|++++++++||||+++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999765 7999999999875433 334567999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+ +|+|.+++.+ ...+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+...
T Consensus 93 Ey~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred eCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 999 6799888843 2479999999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCCccccccccCCccCccccCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
... .....+||+.|||||++.+.+|
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~y 188 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp -------------CTTSCHHHHSSSSC
T ss_pred CCC--ccCCeeECcccCChhhhcCCCC
Confidence 432 2345689999999999998775
No 6
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.9e-40 Score=322.49 Aligned_cols=177 Identities=25% Similarity=0.369 Sum_probs=147.6
Q ss_pred cCCcccceeeccCcEEEEEEEEc----CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
++|++.+.||+|+||+||+|+.. +++.||+|++++.........++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999763 47899999998755444445578899999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
|||||+||+|.+++.+ ...+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 9999999999999854 2468999999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCccCccccCCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... ......+||+.|||||++.+.+|+
T Consensus 176 ~~~~~-~~~~~~~GT~~YmAPE~~~~~~y~ 204 (304)
T 3ubd_A 176 SIDHE-KKAYSFCGTVEYMAPEVVNRRGHT 204 (304)
T ss_dssp ------CCCCSCCCCGGGCCHHHHHTSCCC
T ss_pred ccCCC-ccccccccCcccCCHHHhccCCCC
Confidence 54433 223457899999999999988774
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-38 Score=310.79 Aligned_cols=172 Identities=26% Similarity=0.403 Sum_probs=147.7
Q ss_pred CcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc----CCeeEEE
Q 008026 397 FSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEKLLV 471 (580)
Q Consensus 397 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 471 (580)
|++.+.||+|+||+||+|.+. ++..||+|++..........+.+.+|++++++++|||||++++++.+ +...|+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 366788999999999999775 68999999998766666677889999999999999999999999875 3457999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeEec-CCCcEEEEeeccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFGLV 548 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~a 548 (580)
||||++|+|.+++.+ ...+++..+..|+.||+.||+|||+ ++ ||||||||+|||++ .++.+||+|||+|
T Consensus 108 mEy~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla 179 (290)
T 3fpq_A 108 TELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCC
Confidence 999999999999854 2468999999999999999999997 55 99999999999998 4789999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+..... .....+||+.|||||++.+ +|+
T Consensus 180 ~~~~~~---~~~~~~GTp~YmAPE~~~~-~y~ 207 (290)
T 3fpq_A 180 TLKRAS---FAKAVIGTPEFMAPEMYEE-KYD 207 (290)
T ss_dssp GGCCTT---SBEESCSSCCCCCGGGGGT-CCC
T ss_pred EeCCCC---ccCCcccCccccCHHHcCC-CCC
Confidence 865332 3345789999999999865 453
No 8
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.7e-39 Score=318.13 Aligned_cols=181 Identities=30% Similarity=0.512 Sum_probs=152.2
Q ss_pred cCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 395 NNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||++++++.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 46888999999999999999764 4788999999753 445567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHHHh--------hhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcE
Q 008026 469 LLVFEYMPQGTLSRHIFNWA--------EEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 540 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 540 (580)
++|||||++|+|.+++.... ......++|.+++.|+.||+.||+|||+ ++||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcE
Confidence 99999999999999996532 1223579999999999999999999998 899999999999999999999
Q ss_pred EEEeeccccccCCCCCC-ccccccccCCccCccccCCCCCC
Q 008026 541 KVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 541 kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
||+|||+|+........ ......||++|||||++.+.+|+
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~ 208 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT 208 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCC
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCC
Confidence 99999999866443221 22235699999999999888764
No 9
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=318.36 Aligned_cols=181 Identities=32% Similarity=0.529 Sum_probs=147.0
Q ss_pred cCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 395 NNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
++|.+.+.||+|+||+||+|+++ ++..||||+++.. .....++|.+|++++++++|||||+++++|.+.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46778899999999999999864 4788999999753 445567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHHHhh----------hCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC
Q 008026 469 LLVFEYMPQGTLSRHIFNWAE----------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 538 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~----------~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 538 (580)
|+|||||++|+|.+++..... ....+++|.+++.|+.||+.||+|||+ ++||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCC
Confidence 999999999999999865321 123468999999999999999999998 8999999999999999999
Q ss_pred cEEEEeeccccccCCCCC-CccccccccCCccCccccCCCCCC
Q 008026 539 RAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 539 ~~kl~Dfg~a~~~~~~~~-~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.+||+|||+|+....... ......+||+.|||||++.+..|+
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~ 238 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCC
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCC
Confidence 999999999987644322 223346799999999999988875
No 10
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.8e-38 Score=313.73 Aligned_cols=180 Identities=30% Similarity=0.441 Sum_probs=141.5
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC-------
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN------- 466 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 466 (580)
++|++.+.||+|+||+||+|+.. +++.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 46999999999999999999775 78999999997643 3445678999999999999999999999987544
Q ss_pred -----eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEE
Q 008026 467 -----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 541 (580)
Q Consensus 467 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 541 (580)
..|+|||||++|+|.+++.... .....++..++.|+.||+.||+|||+ ++||||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEE
Confidence 3689999999999999985421 11234566788999999999999998 8999999999999999999999
Q ss_pred EEeeccccccCCCCCC-----------ccccccccCCccCccccCCCCCC
Q 008026 542 VADFGLVRLAPEGKGS-----------IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 542 l~Dfg~a~~~~~~~~~-----------~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|+|||+|+........ ..+..+||+.|||||++.+.+|+
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~ 208 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCC
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCC
Confidence 9999999876543211 12335799999999999998875
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=311.48 Aligned_cols=172 Identities=29% Similarity=0.516 Sum_probs=144.3
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEe
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 474 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 474 (580)
+++++.+.||+|+||+||+|+++ ..||||+++.........++|.+|++++++++|||||++++++.. +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 56788999999999999999875 369999997655556667889999999999999999999998754 568999999
Q ss_pred cCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCCC
Q 008026 475 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 554 (580)
Q Consensus 475 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 554 (580)
|++|+|.+++.. ....+++.+++.|+.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+.....
T Consensus 113 ~~gGsL~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 113 CEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred CCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 999999998843 23469999999999999999999998 89999999999999999999999999999876433
Q ss_pred CC-CccccccccCCccCccccCC
Q 008026 555 KG-SIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 555 ~~-~~~~~~~Gt~~y~APE~~~~ 576 (580)
.. ......+||+.|||||++.+
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~ 208 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRM 208 (307)
T ss_dssp --------CCCCTTSCCHHHHHC
T ss_pred CcceeecccccCCCccCHHHhhc
Confidence 22 22344689999999999864
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-38 Score=316.97 Aligned_cols=171 Identities=27% Similarity=0.349 Sum_probs=146.4
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
+.|++.+.||+|+||+||+|++. +|+.||||+++.+.. ..+|+.++++++|||||++++++.+++..|+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46888899999999999999875 799999999976432 2469999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC-cEEEEeeccccccC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVRLAP 552 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~ 552 (580)
||+||+|.+++.+. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++ .+||+|||+|+...
T Consensus 131 y~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred ccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999998542 468999999999999999999997 8999999999999999887 69999999998765
Q ss_pred CCCCC----ccccccccCCccCccccCCCCCC
Q 008026 553 EGKGS----IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 553 ~~~~~----~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... ....++||+.|||||++.+.+|+
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~ 234 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCC
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCC
Confidence 43211 12235799999999999998875
No 13
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.6e-38 Score=315.00 Aligned_cols=182 Identities=25% Similarity=0.387 Sum_probs=152.2
Q ss_pred cCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 395 NNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
+++++.+.||+|+||+||+|++. +++.||||+++.. ......++|.+|+.++++++|||||+++|++.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC--CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc-cChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 35677889999999999999863 4678999999754 2344567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHHHhhh-----------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC
Q 008026 469 LLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 537 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~ 537 (580)
++|||||++|+|.+++...... ....++|.+++.|+.||+.||+|||+ ++||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCC
Confidence 9999999999999999643211 12468999999999999999999998 899999999999999999
Q ss_pred CcEEEEeeccccccCCCC-CCccccccccCCccCccccCCCCCC
Q 008026 538 MRAKVADFGLVRLAPEGK-GSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 538 ~~~kl~Dfg~a~~~~~~~-~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+.+||+|||+|+...... .......+||++|||||++.++.|+
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s 225 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFS 225 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCC
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCC
Confidence 999999999998664322 1223446799999999999888775
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=9.9e-37 Score=302.75 Aligned_cols=173 Identities=25% Similarity=0.378 Sum_probs=139.7
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC----eeEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----EKLL 470 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~l 470 (580)
++|.+.+.||+|+||+||+|++ +|+.||||++.... ......+.|+..+.+++|||||++++++.+++ ..|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4688899999999999999987 48999999986532 11223345666667889999999999998654 5799
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhC-----CCCCcEecCCCCCCeEecCCCcEEEEee
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL-----AHQSFIHRDLKPSNILLGDDMRAKVADF 545 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~Df 545 (580)
||||+++|+|.+++.. ..++|.++.+++.|++.||+|||+. +..+||||||||+|||++.++++||+||
T Consensus 79 V~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999854 3689999999999999999999973 1248999999999999999999999999
Q ss_pred ccccccCCCCCC---ccccccccCCccCccccCCC
Q 008026 546 GLVRLAPEGKGS---IETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 546 g~a~~~~~~~~~---~~~~~~Gt~~y~APE~~~~~ 577 (580)
|+|+........ .....+||+.|||||++.+.
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~ 187 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhccc
Confidence 999876544322 12335799999999999764
No 15
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.7e-36 Score=305.73 Aligned_cols=191 Identities=26% Similarity=0.377 Sum_probs=157.6
Q ss_pred eHHHHHHhhcCCcccceeeccCcEEEEEEEEcC------CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCC-Ccccce
Q 008026 386 SIQVLRNVTNNFSEENILGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH-RHLVAL 458 (580)
Q Consensus 386 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~ 458 (580)
.....+...++|++.+.||+|+||+||+|++.. ++.||||++.... .....+++.+|++++++++| ||||++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 334444556789999999999999999997642 3679999997643 34456789999999999975 899999
Q ss_pred eeEEEcC-CeeEEEEEecCCCChhHHHHHHhhh-----------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecC
Q 008026 459 LGHCLDG-NEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRD 526 (580)
Q Consensus 459 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~D 526 (580)
+|+|... +..++|||||++|+|.++++..... ....+++.+++.|+.|||.||+|||+ ++|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCc
Confidence 9998765 5689999999999999999764321 12458999999999999999999998 8999999
Q ss_pred CCCCCeEecCCCcEEEEeeccccccCCCCCC-ccccccccCCccCccccCCCCCC
Q 008026 527 LKPSNILLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 527 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|||+|||+++++.+||+|||+|+........ .....+||+.|||||++.+..|+
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~ 265 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 265 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCC
Confidence 9999999999999999999999876544332 23346799999999999888775
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.3e-36 Score=305.95 Aligned_cols=176 Identities=24% Similarity=0.398 Sum_probs=149.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc------CC
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------GN 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~ 466 (580)
.++|++.+.||+|+||+||+|+.. +|+.||||+++.........+.+.+|+++|++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 467999999999999999999775 79999999998765555566788999999999999999999998764 35
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..|+|||||+ |+|.+++. ....+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||
T Consensus 133 ~~~ivmE~~~-g~L~~~i~-----~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH-----SSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT-----SSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEEeCCC-CCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecc
Confidence 7899999996 68988873 23579999999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCC---CCccccccccCCccCccccCCCC
Q 008026 547 LVRLAPEGK---GSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 547 ~a~~~~~~~---~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
+|+...... .......+||+.|||||++.+..
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~ 238 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 238 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTCS
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCCC
Confidence 998764321 12334578999999999988754
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.5e-35 Score=296.69 Aligned_cols=175 Identities=22% Similarity=0.361 Sum_probs=147.2
Q ss_pred HHHHhhcCCcccceeeccCcEEEEEEEEc----CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEE
Q 008026 389 VLRNVTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCL 463 (580)
Q Consensus 389 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 463 (580)
.+..+.++|++.+.||+|+||+||+|+.+ +++.||+|++... ....++.+|+++++.+ +||||+++++++.
T Consensus 15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 34456788999999999999999999753 4688999998653 2345688999999998 5999999999999
Q ss_pred cCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC-CcEEE
Q 008026 464 DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKV 542 (580)
Q Consensus 464 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl 542 (580)
+.+..|+||||+++|+|.+++ +.+++.++..++.||+.||+|||+ ++||||||||+|||++.+ +.+||
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~--------~~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDIL--------NSLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHH--------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEE
T ss_pred ECCEEEEEEeCCCcccHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEE
Confidence 999999999999999999887 248899999999999999999998 899999999999999876 79999
Q ss_pred EeeccccccCCCCC---------------------------CccccccccCCccCccccCCCC
Q 008026 543 ADFGLVRLAPEGKG---------------------------SIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~---------------------------~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
+|||+|+....... ......+||+.|||||++.+.+
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 222 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCP 222 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCS
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCC
Confidence 99999986543211 1123357999999999998754
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.3e-35 Score=311.97 Aligned_cols=176 Identities=27% Similarity=0.387 Sum_probs=148.5
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh-hhHHHHH---HHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG-KGLTEFK---SEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
.++|++.+.||+|+||+||+|+.. +|+.||+|++.+..... .....+. .++.+++.++|||||+++++|.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 368999999999999999999775 79999999997653321 1222333 345667778999999999999999999
Q ss_pred EEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccc
Q 008026 469 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 548 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 548 (580)
|+||||++||+|.+++.+ ...+++..+..++.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|
T Consensus 268 ylVmEy~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp EEEECCCCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEeccccee
Confidence 999999999999999854 2468999999999999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCC-CCCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGN-FGSS 580 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~ 580 (580)
+...... ....+||+.|||||++.+ .+|+
T Consensus 340 ~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~ 369 (689)
T 3v5w_A 340 CDFSKKK---PHASVGTHGYMAPEVLQKGVAYD 369 (689)
T ss_dssp EECSSCC---CCSCCSCGGGCCHHHHSTTCCCC
T ss_pred eecCCCC---CCCccCCcCccCHHHHhCCCCCC
Confidence 8765433 344689999999999964 4553
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.2e-34 Score=305.39 Aligned_cols=176 Identities=25% Similarity=0.394 Sum_probs=154.4
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|+++|+.++||||+++++++.+.+..|+||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 468999999999999999999775 79999999997632 344577899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC--CcEEEEeeccccc
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD--MRAKVADFGLVRL 550 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~ 550 (580)
|||+||+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 234 E~~~gg~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 234 EFMSGGELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp ECCCCCBHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred eecCCCcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 99999999988843 23468999999999999999999998 899999999999999854 8999999999998
Q ss_pred cCCCCCCccccccccCCccCccccCCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... .....+||+.|||||++.+.+|+
T Consensus 307 ~~~~~--~~~~~~GT~~y~APEv~~~~~y~ 334 (573)
T 3uto_A 307 LDPKQ--SVKVTTGTAEFAAPEVAEGKPVG 334 (573)
T ss_dssp CCTTS--EEEEECSSGGGCCHHHHTTCCBC
T ss_pred ccCCC--ceeeeEECccccCHHHhCCCCCC
Confidence 75433 33456899999999999988764
No 20
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.98 E-value=3.4e-32 Score=273.97 Aligned_cols=177 Identities=23% Similarity=0.366 Sum_probs=157.2
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
..++|++.+.||+|+||.||+|++ .+|+.||+|++..........+++.+|+++++.++||||+++++++...+..|+|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 346899999999999999999987 4799999999987666666678899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp ECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred EECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 9999999999988542 458899999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... .....+||+.|+|||++.+..+
T Consensus 165 ~~~~--~~~~~~gt~~y~aPE~~~~~~~ 190 (328)
T 3fe3_A 165 TVGG--KLDAFCGAPPYAAPELFQGKKY 190 (328)
T ss_dssp SSSC--GGGTTSSSGGGCCHHHHHTCCC
T ss_pred CCCC--ccccccCCcceeCcccccCCCc
Confidence 5432 2345689999999999987764
No 21
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=1.5e-31 Score=270.12 Aligned_cols=178 Identities=28% Similarity=0.391 Sum_probs=153.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++.+... .......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367999999999999999999775 689999999976432 233456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 84 MEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 999999999988853 1468899999999999999999998 89999999999999999999999999999864
Q ss_pred CCCCCCccccccccCCccCccccCCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.... ......+||+.|+|||++.+.+|+
T Consensus 156 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 183 (337)
T 1o6l_A 156 ISDG-ATMKTFCGTPEYLAPEVLEDNDYG 183 (337)
T ss_dssp CCTT-CCBCCCEECGGGCCGGGGSSSCBC
T ss_pred ccCC-CcccccccChhhCChhhhcCCCCC
Confidence 3322 223456899999999999887653
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=8.6e-32 Score=272.65 Aligned_cols=179 Identities=28% Similarity=0.461 Sum_probs=146.0
Q ss_pred HhhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
.+.++|++.+.||+|+||.||+|+. .+++.||||++...... .....+.+|++++++++||||+++++++...+..++
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 3457899999999999999999976 47999999999765432 335678999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++++|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 86 v~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 99999999999988541 358999999999999999999998 8999999999999999999999999999886
Q ss_pred cCCCCCCccccccccCCccCccccCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
............+||+.|+|||++.+..+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 186 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSY 186 (347)
T ss_dssp --------------CGGGCCHHHHTTC--
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCC
Confidence 65443333445679999999999987654
No 23
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=5.3e-32 Score=279.99 Aligned_cols=183 Identities=26% Similarity=0.334 Sum_probs=155.2
Q ss_pred HHHHHHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEc
Q 008026 387 IQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 464 (580)
Q Consensus 387 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 464 (580)
.+..+...++|++.+.||+|+||.||+|+.. +++.||+|++.+... .......+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3444555689999999999999999999876 689999999976322 12233457899999999999999999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEe
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD 544 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 544 (580)
.+..|+||||+++|+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~D 211 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 211 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEec
Confidence 9999999999999999998843 358899999999999999999998 8999999999999999999999999
Q ss_pred eccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 545 FGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 545 fg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
||+|+.............+||+.|+|||++.+.+
T Consensus 212 FG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 245 (410)
T 3v8s_A 212 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245 (410)
T ss_dssp CTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTT
T ss_pred cceeEeeccCCcccccCCcCCccccCHHHhhccC
Confidence 9999876544322334568999999999987654
No 24
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97 E-value=8.7e-32 Score=280.51 Aligned_cols=182 Identities=24% Similarity=0.322 Sum_probs=155.0
Q ss_pred HHHHHHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEc
Q 008026 387 IQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 464 (580)
Q Consensus 387 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 464 (580)
.+..+...++|++.+.||+|+||+||+|+.. +++.||+|++.+... .......+.+|..++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3455556789999999999999999999876 578999999976322 12223448899999999999999999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEe
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD 544 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 544 (580)
.+..|+||||+++|+|.+++.. ....+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~----~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSK----FEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEecCCCCcHHHHHHH----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcc
Confidence 9999999999999999999843 23468999999999999999999998 8999999999999999999999999
Q ss_pred eccccccCCCCCCccccccccCCccCccccC
Q 008026 545 FGLVRLAPEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 545 fg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
||+|+.............+||+.|+|||++.
T Consensus 219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~ 249 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 249 (437)
T ss_dssp CTTCEECCTTSCEECCSCCSCGGGCCHHHHH
T ss_pred hhhhhhcccCCCcccccccCCcCeeChHHHh
Confidence 9999876554433334468999999999986
No 25
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=2.6e-31 Score=273.33 Aligned_cols=178 Identities=22% Similarity=0.370 Sum_probs=152.0
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 470 (580)
.++|++.+.||+|+||+||+|+.. +++.||+|++++.... ......+.+|..++.++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 367999999999999999999876 6889999999875433 23345688899999887 79999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.
T Consensus 131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999888541 468999999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCccCccccCCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... ......+||+.|+|||++.+.+|+
T Consensus 203 ~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~ 231 (396)
T 4dc2_A 203 GLRPG-DTTSTFCGTPNYIAPEILRGEDYG 231 (396)
T ss_dssp CCCTT-CCBCCCCBCGGGCCHHHHTTCCBC
T ss_pred cccCC-CccccccCCcccCCchhhcCCCCC
Confidence 43322 234457899999999999987764
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.97 E-value=6.5e-31 Score=261.22 Aligned_cols=175 Identities=26% Similarity=0.434 Sum_probs=152.6
Q ss_pred hcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 46899999999999999999976 4789999999976432 23567889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++++|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 97 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp ECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999998843 358899999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCCccccccccCCccCccccCCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.... ......||+.|+|||++.+..|+
T Consensus 168 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~ 194 (297)
T 3fxz_A 168 PEQS-KRSTMVGTPYWMAPEVVTRKAYG 194 (297)
T ss_dssp STTC-CBCCCCSCGGGCCHHHHHCSCBC
T ss_pred Cccc-ccCCccCCcCccChhhhcCCCCC
Confidence 4332 23446799999999999877653
No 27
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=8.9e-31 Score=262.02 Aligned_cols=177 Identities=27% Similarity=0.466 Sum_probs=151.7
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
++|++.+.||+|+||.||+|... +++.||+|++.. ......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 57899999999999999999875 689999998854 345566789999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 88 YIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp CCTTCBHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred ecCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 9999999999854 23468999999999999999999998 8999999999999999999999999999987643
Q ss_pred CCCCc-------------cccccccCCccCccccCCCCCC
Q 008026 554 GKGSI-------------ETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 554 ~~~~~-------------~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... .....||+.|+|||++.+..++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 200 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYD 200 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCC
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCC
Confidence 32211 1145799999999999887653
No 28
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.97 E-value=4e-31 Score=262.41 Aligned_cols=178 Identities=26% Similarity=0.429 Sum_probs=148.3
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|+.. ++..||+|++..... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 468999999999999999999765 689999999865432 334567889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9999999999988542 368999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
............||+.|+|||++.+..+
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 189 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEAT 189 (294)
T ss_dssp -------------CCSSCCHHHHHTCCC
T ss_pred ccccccccCccccCccccCHhHhcCCCC
Confidence 5443333344679999999999887665
No 29
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.97 E-value=8.5e-31 Score=266.97 Aligned_cols=178 Identities=26% Similarity=0.367 Sum_probs=154.0
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh----hhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
+.++|++.+.||+|+||.||+|+.. +|+.||+|++....... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4568999999999999999999775 68999999998654322 135789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC----cEEEE
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 543 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~ 543 (580)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||++++++ .+||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 9999999999999998832 3468999999999999999999998 8999999999999998776 79999
Q ss_pred eeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 544 Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|||+++...... .....+||+.|+|||++.+.+|+
T Consensus 162 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 196 (361)
T 2yab_A 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLG 196 (361)
T ss_dssp CCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCC
T ss_pred ecCCceEcCCCC--ccccCCCCccEECchHHcCCCCC
Confidence 999998765432 23346799999999999887653
No 30
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=271.59 Aligned_cols=177 Identities=27% Similarity=0.405 Sum_probs=147.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 470 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++.+... .......+.+|.++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999875 689999999986432 233456788999999998 69999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.
T Consensus 102 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999888542 468999999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCccCccccCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..... ......+||+.|+|||++.+..|
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~ 201 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLY 201 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHC
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCc
Confidence 43322 23345689999999999876544
No 31
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.97 E-value=8.8e-31 Score=267.50 Aligned_cols=179 Identities=26% Similarity=0.411 Sum_probs=155.5
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
.+.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34568999999999999999999775 68999999998766666667789999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC---CcEEEEeecc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVADFGL 547 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~ 547 (580)
||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 9999999999888742 3468999999999999999999998 899999999999999864 4599999999
Q ss_pred ccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 548 VRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 548 a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++...... ......||+.|+|||++.+.+|+
T Consensus 178 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 208 (362)
T 2bdw_A 178 AIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYS 208 (362)
T ss_dssp CBCCTTCC--SCCCSCSCTTTCCHHHHTTCCCC
T ss_pred ceEecCCc--ccccCCCCccccCHHHHccCCCC
Confidence 98765432 23346799999999999887653
No 32
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=276.57 Aligned_cols=183 Identities=25% Similarity=0.325 Sum_probs=155.7
Q ss_pred eHHHHHHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEE
Q 008026 386 SIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCL 463 (580)
Q Consensus 386 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 463 (580)
..++.+...++|++.+.||+|+||+||+|+.. +++.||+|++.+... .......+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556789999999999999999999875 799999999976322 2223456889999999999999999999999
Q ss_pred cCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEE
Q 008026 464 DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 543 (580)
Q Consensus 464 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 543 (580)
+.+..|+||||+++|+|.+++.+. ...+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEe
Confidence 999999999999999999998542 2368899999999999999999998 899999999999999999999999
Q ss_pred eeccccccCCCCCCccccccccCCccCccccC
Q 008026 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 544 Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
|||+|+.............+||+.|+|||++.
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~ 236 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCGGGCCHHHHH
T ss_pred echhheeccCCCccccceeccccCcCCHHHHh
Confidence 99999876544332233468999999999986
No 33
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.97 E-value=8.2e-31 Score=265.80 Aligned_cols=177 Identities=23% Similarity=0.375 Sum_probs=153.1
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 471 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++.+... .....+.+.+|..+++++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999875 689999999987543 334456788999999988 799999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++|+|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999888531 368999999999999999999998 89999999999999999999999999999864
Q ss_pred CCCCCCccccccccCCccCccccCCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.... ......+||+.|+|||++.+.+|+
T Consensus 161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 188 (345)
T 3a8x_A 161 LRPG-DTTSTFCGTPNYIAPEILRGEDYG 188 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred cCCC-CcccccCCCccccCccccCCCCCC
Confidence 3322 223456899999999999887653
No 34
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.97 E-value=6.8e-31 Score=274.74 Aligned_cols=180 Identities=23% Similarity=0.322 Sum_probs=154.9
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
.+.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 35678999999999999999999764 78999999998766556667789999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec---CCCcEEEEeecc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGL 547 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~ 547 (580)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ +++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 9999999999988843 2468999999999999999999998 8999999999999998 467899999999
Q ss_pred ccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 548 VRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 548 a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++...... .......||+.|+|||++.+.+|+
T Consensus 160 a~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~ 191 (444)
T 3soa_A 160 AIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYG 191 (444)
T ss_dssp CBCCCTTC-CBCCCSCSCGGGCCHHHHTTCCBC
T ss_pred eEEecCCC-ceeecccCCcccCCHHHhcCCCCC
Confidence 98765433 223446799999999999887653
No 35
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97 E-value=5.3e-31 Score=266.77 Aligned_cols=179 Identities=27% Similarity=0.441 Sum_probs=153.0
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 469 (580)
..++|++.+.||+|+||.||+|+.. +++.||+|++++... .......+..|.+++..+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3578999999999999999999875 689999999976432 223456778899999887 8999999999999999999
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+
T Consensus 95 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999988541 368899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 550 LAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 550 ~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
...... ......+||+.|+|||++.+.+|+
T Consensus 167 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 196 (345)
T 1xjd_A 167 ENMLGD-AKTNTFCGTPDYIAPEILLGQKYN 196 (345)
T ss_dssp CCCCTT-CCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred hcccCC-CcccCCCCCcccCChhhhcCCCCC
Confidence 653322 223456899999999999887653
No 36
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.97 E-value=6.5e-31 Score=262.66 Aligned_cols=180 Identities=32% Similarity=0.547 Sum_probs=145.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.++|++.+.||+|+||.||+|+. +++.||+|++..........+++.+|++++++++||||+++++++...+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 46799999999999999999977 58899999998766566667789999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|+++++|.+++...... ..+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++..
T Consensus 115 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp CCTTCBHHHHHHSTTHH--HHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred cCCCCcHHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999998542111 238899999999999999999997 67 999999999999999999999999999865
Q ss_pred CCCCCCccccccccCCccCccccCCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.... .......||+.|+|||++.+..++
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 217 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSN 217 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCC
T ss_pred cccc-cccccCCCCccccChhhhcCCCCC
Confidence 4332 122345799999999999887653
No 37
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97 E-value=6.4e-31 Score=263.48 Aligned_cols=175 Identities=27% Similarity=0.433 Sum_probs=152.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++.+... .....+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367999999999999999999775 789999999976432 223456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp ECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 999999999998843 2468899999999999999999997 89999999999999999999999999999875
Q ss_pred CCCCCCccccccccCCccCccccCCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
... ....+||+.|+|||++.+.+|+
T Consensus 157 ~~~----~~~~~gt~~y~aPE~~~~~~~~ 181 (318)
T 1fot_A 157 PDV----TYTLCGTPDYIAPEVVSTKPYN 181 (318)
T ss_dssp SSC----BCCCCSCTTTCCHHHHTTCCBC
T ss_pred CCc----cccccCCccccCHhHhcCCCCC
Confidence 432 2345799999999999887653
No 38
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=7.1e-31 Score=269.00 Aligned_cols=179 Identities=23% Similarity=0.293 Sum_probs=151.9
Q ss_pred hcCCcccceeeccCcEEEEEEE------EcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC---CCcccceeeEEEc
Q 008026 394 TNNFSEENILGRGGFGTVYKGE------LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR---HRHLVALLGHCLD 464 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~ 464 (580)
.++|.+.+.||+|+||.||+|. ..+++.||+|++... ...++.+|++++++++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4679999999999999999993 346889999998653 3456788888888887 9999999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC--------
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-------- 536 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~-------- 536 (580)
.+..++||||+++|+|.+++..........+++.+++.|+.||+.||+|||+ .+||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999976554445679999999999999999999997 89999999999999988
Q ss_pred ---CCcEEEEeeccccccCC-CCCCccccccccCCccCccccCCCCCC
Q 008026 537 ---DMRAKVADFGLVRLAPE-GKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 537 ---~~~~kl~Dfg~a~~~~~-~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++.+||+|||+|+.... .........+||+.|||||++.+..|+
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 263 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWN 263 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBS
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCC
Confidence 89999999999976432 122233456799999999999987764
No 39
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=2e-31 Score=268.72 Aligned_cols=195 Identities=42% Similarity=0.733 Sum_probs=163.8
Q ss_pred eeeeHHHHHHhhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEE
Q 008026 383 MVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 462 (580)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 462 (580)
..++.+++....++|++.+.||+|+||.||+|+..+++.||+|++..... ......+.+|+++++.++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 45677889999999999999999999999999888899999999876432 22234689999999999999999999999
Q ss_pred EcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEE
Q 008026 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 542 (580)
Q Consensus 463 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 542 (580)
...+..++||||+++++|.+++..... ....+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999855322 2345899999999999999999999832239999999999999999999999
Q ss_pred EeeccccccCCCCCCccccccccCCccCccccCCCCC
Q 008026 543 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
+|||+++..............||+.|+|||++.+..+
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 212 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 212 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEE
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCC
Confidence 9999998775544444455679999999999865543
No 40
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97 E-value=1.1e-30 Score=265.96 Aligned_cols=183 Identities=23% Similarity=0.346 Sum_probs=153.5
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC---hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS---GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3467999999999999999999765 6899999999753221 22457899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc---EEEEee
Q 008026 469 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADF 545 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Df 545 (580)
|+||||+++++|.+++...... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEeCCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecC
Confidence 9999999999999888654332 2458899999999999999999998 89999999999999986554 999999
Q ss_pred ccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 546 GLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 546 g~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|+++...... ......+||+.|+|||++.+..|+
T Consensus 178 g~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 211 (351)
T 3c0i_A 178 GVAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYG 211 (351)
T ss_dssp TTCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBC
T ss_pred cceeEecCCC-eeecCCcCCcCccCHHHHcCCCCC
Confidence 9998765432 223345799999999999887653
No 41
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=268.03 Aligned_cols=172 Identities=25% Similarity=0.409 Sum_probs=150.9
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++.+... .......+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57999999999999999999765 688999999976432 2334577889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+.+|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+...
T Consensus 95 e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp CCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999988843 3468999999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCCccccccccCCccCccccCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
... .....+||+.|+|||++.+
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~ 188 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSS 188 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCC
T ss_pred CCC--ceeccCCCccccCCeeecc
Confidence 432 2345689999999999874
No 42
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.97 E-value=1.4e-30 Score=260.51 Aligned_cols=176 Identities=27% Similarity=0.372 Sum_probs=147.7
Q ss_pred hhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
+.++|++.+.||+|+||.||+|+..+++.||+|++............+.+|++++++++||||+++++++.+.+..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 45789999999999999999999888999999999765444445678899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 99 e~~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 99 EFMEK-DLKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp ECCSE-EHHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred cCCCC-CHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 99975 78777643 33458999999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCCccccccccCCccCccccCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
.... ......||+.|+|||++.+.
T Consensus 171 ~~~~-~~~~~~~t~~y~aPE~~~~~ 194 (311)
T 3niz_A 171 IPVR-SYTHEVVTLWYRAPDVLMGS 194 (311)
T ss_dssp SCCC----CCCCCCTTCCHHHHTTC
T ss_pred CCcc-cccCCcccCCcCCHHHhcCC
Confidence 3322 22335789999999998763
No 43
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97 E-value=8.2e-31 Score=266.27 Aligned_cols=178 Identities=26% Similarity=0.336 Sum_probs=152.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 470 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++.+... .....+.+.+|.++++.+ +||+|+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 468999999999999999999876 578999999976432 233456788999999988 79999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++|+|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.
T Consensus 99 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999988542 358899999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCccCccccCCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... ......+||+.|+|||++.+.+|+
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 199 (353)
T 2i0e_A 171 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYG 199 (353)
T ss_dssp CCCTT-CCBCCCCSCGGGCCHHHHTTCCBS
T ss_pred cccCC-cccccccCCccccChhhhcCCCcC
Confidence 43322 223456899999999999887653
No 44
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.97 E-value=1.2e-30 Score=263.41 Aligned_cols=182 Identities=29% Similarity=0.428 Sum_probs=148.4
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC-----
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----- 466 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 466 (580)
+.++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 3467999999999999999999876 79999999997643 3445678999999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEEecCCCChhHHHHHHhhhCCCC
Q 008026 467 ----------------------------------------------------EKLLVFEYMPQGTLSRHIFNWAEEGLKP 494 (580)
Q Consensus 467 ----------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~ 494 (580)
..++||||+++++|.+++.... ....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~ 160 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLED 160 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGG
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--Cccc
Confidence 2799999999999999985422 1234
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCCCCC-----------Ccccccc
Q 008026 495 LEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG-----------SIETRIA 563 (580)
Q Consensus 495 ~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~ 563 (580)
.++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....... .......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 5666789999999999999998 8999999999999999999999999999987654321 1123356
Q ss_pred ccCCccCccccCCCCCC
Q 008026 564 GTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 564 Gt~~y~APE~~~~~~~~ 580 (580)
||+.|+|||++.+.+++
T Consensus 238 gt~~y~aPE~~~~~~~~ 254 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYS 254 (332)
T ss_dssp -CGGGSCHHHHHCCCCC
T ss_pred CCcCccChHHhcCCCCc
Confidence 99999999999876653
No 45
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.97 E-value=2.3e-30 Score=256.64 Aligned_cols=175 Identities=23% Similarity=0.338 Sum_probs=150.5
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++............+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999875 68999999998765555566788999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++ ++.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9975 66555532 23568999999999999999999998 8999999999999999999999999999987653
Q ss_pred CCCCccccccccCCccCccccCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
... ......||+.|+|||++.+.+
T Consensus 154 ~~~-~~~~~~~t~~y~aPE~~~~~~ 177 (292)
T 3o0g_A 154 PVR-CYSAEVVTLWYRPPDVLFGAK 177 (292)
T ss_dssp CCS-CCCSCCSCGGGCCHHHHTTCS
T ss_pred ccc-cccCCccccCCcChHHHcCCC
Confidence 322 233457899999999987654
No 46
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2e-30 Score=260.45 Aligned_cols=175 Identities=22% Similarity=0.313 Sum_probs=151.9
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 4578999999999999999999775 6889999998653 33456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC--CCcEEEEeecccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR 549 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~ 549 (580)
|||+++++|.+++.. ....+++.++..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 80 FEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp ECCCCCCBHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEeCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence 999999999988832 22468999999999999999999998 89999999999999986 7899999999998
Q ss_pred ccCCCCCCccccccccCCccCccccCCCCC
Q 008026 550 LAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 550 ~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
...... ......||+.|+|||++.+..+
T Consensus 153 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~ 180 (321)
T 1tki_A 153 QLKPGD--NFRLLFTAPEYYAPEVHQHDVV 180 (321)
T ss_dssp ECCTTC--EEEEEESCGGGSCHHHHTTCEE
T ss_pred ECCCCC--ccccccCChhhcCcHHhcCCCC
Confidence 775433 2344679999999999987653
No 47
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=1.4e-30 Score=262.45 Aligned_cols=178 Identities=27% Similarity=0.452 Sum_probs=141.9
Q ss_pred hcCCcccceeeccCcEEEEEEEE----cCCcEEEEEEeecccc--ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVI--SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
.++|++.+.||+|+||.||+|+. .+++.||+|++.+... .......+.+|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35799999999999999999986 4789999999976532 22344567899999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 547 (580)
.|+||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 9999999999999988853 1357889999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 548 VRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 548 a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++...... ......+||+.|+|||++.+.+++
T Consensus 168 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 199 (327)
T 3a62_A 168 CKESIHDG-TVTHTFCGTIEYMAPEILMRSGHN 199 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCC
T ss_pred ccccccCC-ccccccCCCcCccCHhhCcCCCCC
Confidence 97643322 223346799999999999877653
No 48
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97 E-value=1.3e-30 Score=264.83 Aligned_cols=174 Identities=27% Similarity=0.362 Sum_probs=152.6
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++.+... .....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57999999999999999999875 689999999976432 2334567889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 121 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999988542 358899999999999999999998 899999999999999999999999999998764
Q ss_pred CCCCCccccccccCCccCccccCCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.. ....+||+.|+|||++.+.+|+
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~ 216 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYN 216 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBC
T ss_pred CC----cccccCCccccCHHHhcCCCCC
Confidence 32 2345799999999999887653
No 49
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=2.1e-30 Score=265.66 Aligned_cols=183 Identities=26% Similarity=0.424 Sum_probs=152.4
Q ss_pred hcCCcccceeeccCcEEEEEEEEc--------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEc
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 464 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 464 (580)
.++|++.+.||+|+||.||+|+.. ++..||+|+++.. ......+++.+|+++++++ +||||+++++++..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 367999999999999999999752 3567999999764 3445567899999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhh-----------hCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeE
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAE-----------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 533 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIl 533 (580)
.+..|+||||+++|+|.+++..... .....+++.+++.++.||+.||+|||+ .+|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEE
Confidence 9999999999999999999865321 112357899999999999999999998 89999999999999
Q ss_pred ecCCCcEEEEeeccccccCCCCC-CccccccccCCccCccccCCCCCC
Q 008026 534 LGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 534 l~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++.++.+||+|||+++....... .......||+.|+|||++.+..|+
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 283 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 283 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCC
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCC
Confidence 99999999999999986644322 122334578899999998877653
No 50
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.2e-30 Score=258.19 Aligned_cols=178 Identities=26% Similarity=0.376 Sum_probs=153.0
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh----hhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3457999999999999999999775 68999999997643321 235789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC----cEEEE
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 543 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~ 543 (580)
.++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp EEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 9999999999999998832 3468999999999999999999998 8999999999999998877 79999
Q ss_pred eeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 544 Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|||+++...... ......||+.|+|||++.+..++
T Consensus 161 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 195 (326)
T 2y0a_A 161 DFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLG 195 (326)
T ss_dssp CCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCC
T ss_pred ECCCCeECCCCC--ccccccCCcCcCCceeecCCCCC
Confidence 999998764332 22345799999999999877653
No 51
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.97 E-value=1.4e-30 Score=266.33 Aligned_cols=178 Identities=30% Similarity=0.401 Sum_probs=143.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHH-HHhcCCCcccceeeEEEcCCeeEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAV-LTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++.+.... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357999999999999999999876 6889999999875432 2334556677776 567899999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 117 v~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 9999999999998854 1357889999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCccCccccCCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... ......+||+.|+|||++.+.+|+
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 217 (373)
T 2r5t_A 189 NIEHN-STTSTFCGTPEYLAPEVLHKQPYD 217 (373)
T ss_dssp GBCCC-CCCCSBSCCCCCCCHHHHTTCCCC
T ss_pred cccCC-CccccccCCccccCHHHhCCCCCC
Confidence 43332 223456899999999999887764
No 52
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=1.4e-30 Score=255.05 Aligned_cols=175 Identities=30% Similarity=0.464 Sum_probs=150.8
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEe
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 474 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 474 (580)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 57899999999999999999988889999999976432 346789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCCC
Q 008026 475 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 554 (580)
Q Consensus 475 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 554 (580)
+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 87 MEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 999999998843 23468999999999999999999998 89999999999999999999999999999866443
Q ss_pred CCCccccccccCCccCccccCCCCC
Q 008026 555 KGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 555 ~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.........||+.|+|||++.+.++
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~ 184 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRY 184 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCC
T ss_pred ccccccCcccccccCCHHHhcCCCC
Confidence 2222233457888999999876655
No 53
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=2.1e-30 Score=260.72 Aligned_cols=178 Identities=27% Similarity=0.403 Sum_probs=149.5
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 3578999999999999999999776 789999999975432 22346688999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++. ....+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 155 (323)
T 3tki_A 84 LEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (323)
T ss_dssp EECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeecccee
Confidence 99999999998873 23468999999999999999999998 89999999999999999999999999999865
Q ss_pred CCCC-CCccccccccCCccCccccCCCCC
Q 008026 552 PEGK-GSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~-~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... ........||+.|+|||++.+.++
T Consensus 156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 184 (323)
T 3tki_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREF 184 (323)
T ss_dssp EETTEECCBCSCCSCGGGSCHHHHHCSSB
T ss_pred ccCCcccccCCCccCcCccCcHHhccCCC
Confidence 4322 122234679999999999876653
No 54
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.97 E-value=2.4e-30 Score=256.01 Aligned_cols=174 Identities=27% Similarity=0.369 Sum_probs=146.5
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEe
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 474 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 474 (580)
++|++.+.||+|+||.||+|+..+++.||+|++............+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999888899999999976544444457788999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCCC
Q 008026 475 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 554 (580)
Q Consensus 475 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 554 (580)
+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 82 LDQ-DLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CSE-EHHHHHHT----STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred cCC-CHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 975 88887743 23468899999999999999999998 89999999999999999999999999999876433
Q ss_pred CCCccccccccCCccCccccCCC
Q 008026 555 KGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 555 ~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
.. ......||+.|+|||++.+.
T Consensus 154 ~~-~~~~~~~t~~y~aPE~~~~~ 175 (288)
T 1ob3_A 154 VR-KYTHEIVTLWYRAPDVLMGS 175 (288)
T ss_dssp ---------CCCTTCCHHHHTTC
T ss_pred cc-ccccccccccccCchheeCC
Confidence 21 22335789999999998764
No 55
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=7.1e-30 Score=256.64 Aligned_cols=171 Identities=26% Similarity=0.378 Sum_probs=149.5
Q ss_pred CcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEec
Q 008026 397 FSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYM 475 (580)
Q Consensus 397 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 475 (580)
|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 124 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence 677789999999999999876 79999999997543 234567889999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCCCC
Q 008026 476 PQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK 555 (580)
Q Consensus 476 ~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 555 (580)
++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 195 (321)
T 2c30_A 125 QGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195 (321)
T ss_dssp CSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc
Confidence 99999988732 368999999999999999999998 899999999999999999999999999998765432
Q ss_pred CCccccccccCCccCccccCCCCC
Q 008026 556 GSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 556 ~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
. ......||+.|+|||++.+..+
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~ 218 (321)
T 2c30_A 196 P-KRKSLVGTPYWMAPEVISRSLY 218 (321)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCB
T ss_pred c-ccccccCCccccCHhhhcCCCC
Confidence 2 2344679999999999987765
No 56
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=9.5e-31 Score=263.15 Aligned_cols=185 Identities=41% Similarity=0.755 Sum_probs=156.0
Q ss_pred HHHHhhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 389 VLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 389 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
++....++|++.+.||+|+||.||+|++++++.||+|++... .....+.+.+|++++++++||||+++++++...+..
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 344567899999999999999999999888999999988753 234567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccc
Q 008026 469 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 548 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 548 (580)
++||||+++++|.+++.... .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 99999999999999884321 112358999999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCC-CCccccccccCCccCccccCCCCC
Q 008026 549 RLAPEGK-GSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 549 ~~~~~~~-~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
+...... ........||+.|+|||++.+..+
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 218 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRL 218 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCC
Confidence 8654322 122334569999999999876554
No 57
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=3.1e-30 Score=275.25 Aligned_cols=178 Identities=34% Similarity=0.507 Sum_probs=153.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.+... .......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 799999999976432 223456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++|+|.+++.. .+...+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+..
T Consensus 263 mEy~~gg~L~~~l~~---~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHS---SSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999988853 223458999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... .....+||+.|+|||++.+.+|
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~ 362 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERY 362 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEE
T ss_pred ccCc--cccccCCCccccCHHHHcCCCC
Confidence 5433 2334589999999999987654
No 58
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.8e-30 Score=260.46 Aligned_cols=175 Identities=27% Similarity=0.439 Sum_probs=150.7
Q ss_pred hcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|.. .+++.||+|++...... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999986 47899999999764322 22346789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+ +|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 9999 67998887541 468999999999999999999998 79999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... .....+||+.|+|||++.+..+
T Consensus 159 ~~~~--~~~~~~gt~~y~aPE~~~~~~~ 184 (336)
T 3h4j_B 159 TDGN--FLKTSCGSPNYAAPEVINGKLY 184 (336)
T ss_dssp TTSB--TTCCCTTSTTTSCGGGSCCSGG
T ss_pred cCCc--ccccccCCcCcCCHHHHcCCCC
Confidence 5432 2344579999999999987654
No 59
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.97 E-value=4.1e-30 Score=273.71 Aligned_cols=182 Identities=31% Similarity=0.461 Sum_probs=155.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++.+.... ......+.+|++++++++||||+++++++.+....|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999875 6999999999764332 23456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++|+|.+++..... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 999999999998854221 13468999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... .....+||+.|+|||++.+.+|+
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~ 367 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGEEYD 367 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTCCBC
T ss_pred cCCCc-ccccccCCccccChhhhcCCCCC
Confidence 54432 23345899999999999987664
No 60
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=6.2e-30 Score=254.37 Aligned_cols=175 Identities=31% Similarity=0.480 Sum_probs=144.5
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh------------------------hhHHHHHHHHHHHH
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG------------------------KGLTEFKSEIAVLT 448 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~~~~E~~~l~ 448 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 368999999999999999999765 68999999997643211 12356889999999
Q ss_pred hcCCCcccceeeEEEc--CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecC
Q 008026 449 KVRHRHLVALLGHCLD--GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRD 526 (580)
Q Consensus 449 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~D 526 (580)
+++||||+++++++.+ .+..++||||+++++|.+++. ...+++.++..++.||+.||+|||+ .+|+|||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~D 162 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRD 162 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccC
Confidence 9999999999999987 567899999999999987642 2468999999999999999999998 8999999
Q ss_pred CCCCCeEecCCCcEEEEeeccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 527 LKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 527 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
|||+||+++.++.+||+|||+++...... .......||+.|+|||++.+..
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~ 213 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETR 213 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTC
T ss_pred CCHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCC
Confidence 99999999999999999999998765432 2233457999999999998654
No 61
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=5.2e-31 Score=266.82 Aligned_cols=169 Identities=21% Similarity=0.278 Sum_probs=138.5
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeecccc------ChhhHHHHHHHHHHHHhcC---------CCcccce
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVI------SGKGLTEFKSEIAVLTKVR---------HRHLVAL 458 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~niv~~ 458 (580)
.++|++.+.||+|+||+||+|+. +++.||||++..... .....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35789999999999999999987 689999999986532 2234478899999999886 5555554
Q ss_pred -----------------eeEEEc-------------CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHH
Q 008026 459 -----------------LGHCLD-------------GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 508 (580)
Q Consensus 459 -----------------~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~ 508 (580)
++++.+ .+..|+||||+++|++.+.+.+ ..+++.+++.++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 444443 6789999999999977666522 4578999999999999
Q ss_pred HHHHHHH-hCCCCCcEecCCCCCCeEecCCC--------------------cEEEEeeccccccCCCCCCccccccccCC
Q 008026 509 RGVEYLH-GLAHQSFIHRDLKPSNILLGDDM--------------------RAKVADFGLVRLAPEGKGSIETRIAGTFG 567 (580)
Q Consensus 509 ~aL~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~ 567 (580)
.||+||| + .+|+||||||+|||++.++ .+||+|||+|+..... ..+||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 7 7999999999999999876 8999999999876532 3479999
Q ss_pred ccCccccCCCC
Q 008026 568 YLAPEYAGNFG 578 (580)
Q Consensus 568 y~APE~~~~~~ 578 (580)
|||||++.+..
T Consensus 243 y~aPE~~~g~~ 253 (336)
T 2vuw_A 243 SMDEDLFTGDG 253 (336)
T ss_dssp TTCSGGGCCCS
T ss_pred ccChhhhcCCC
Confidence 99999998653
No 62
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=4.1e-30 Score=271.54 Aligned_cols=177 Identities=25% Similarity=0.349 Sum_probs=136.9
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC-----Ce
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----NE 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 467 (580)
.++|++.+.||+|+||.||+|+.. +++.||||++..........+++.+|++++++++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999765 789999999976555556678899999999999999999999998543 56
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 547 (580)
.|+||||+ +++|.+++. ....+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 132 ~~lv~e~~-~~~L~~~~~-----~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR-----TPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEEECCC-SEEHHHHHH-----SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecc-ccchhhhcc-----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeeccccc
Confidence 89999998 568888873 23568999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCC--------------------------CccccccccCCccCccccC-CCCC
Q 008026 548 VRLAPEGKG--------------------------SIETRIAGTFGYLAPEYAG-NFGS 579 (580)
Q Consensus 548 a~~~~~~~~--------------------------~~~~~~~Gt~~y~APE~~~-~~~~ 579 (580)
|+....... ......+||+.|+|||++. +..|
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 261 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENY 261 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCC
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCC
Confidence 987643211 1223467899999999864 4334
No 63
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=5e-30 Score=250.91 Aligned_cols=175 Identities=30% Similarity=0.443 Sum_probs=150.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.++|++.+.||+|+||.||+|+..++..||+|++..... ..+++.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 467999999999999999999988888999999976432 34678999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++++|.+++... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 84 YISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred ccCCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 99999999998542 1358899999999999999999998 8999999999999999999999999999987655
Q ss_pred CCCCccccccccCCccCccccCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
..........||+.|+|||++.+.+
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~ 181 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFK 181 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSE
T ss_pred hhhhcccCCCcCcccCCHHHHhccC
Confidence 4332233345677899999986544
No 64
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=4.2e-30 Score=258.76 Aligned_cols=178 Identities=26% Similarity=0.425 Sum_probs=147.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc----CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
.++|++.+.||+|+||.||+|++. .+..||||++... ......+.+.+|++++++++||||+++++++.+.+..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 357999999999999999999874 3456999999763 24455678999999999999999999999999999999
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEeeCCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999998843 23468999999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCCc--cccccccCCccCccccCCCCC
Q 008026 550 LAPEGKGSI--ETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 550 ~~~~~~~~~--~~~~~Gt~~y~APE~~~~~~~ 579 (580)
......... .....||+.|+|||++.+..+
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 231 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF 231 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEE
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCC
Confidence 765432211 122346788999999876543
No 65
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.96 E-value=1.4e-29 Score=261.76 Aligned_cols=176 Identities=19% Similarity=0.272 Sum_probs=152.1
Q ss_pred cCCcccceeecc--CcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 395 NNFSEENILGRG--GFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 395 ~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
++|++.+.||+| +||.||+|+.. +++.||||++..........+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 579999999999 99999999876 799999999987665566677889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+...
T Consensus 105 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 105 TSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999998542 22468999999999999999999998 89999999999999999999999999988654
Q ss_pred CCCCC------CccccccccCCccCccccCC
Q 008026 552 PEGKG------SIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 552 ~~~~~------~~~~~~~Gt~~y~APE~~~~ 576 (580)
..... .......||+.|+|||++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 209 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ 209 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHST
T ss_pred ccccccccccccccccccccccccCHHHHhc
Confidence 22110 11122478999999999987
No 66
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.96 E-value=1.7e-30 Score=291.64 Aligned_cols=258 Identities=23% Similarity=0.281 Sum_probs=190.9
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|+++|.+|..| .++..|+.++++.|.+.+..|..+..+++|++|+|++|++++.+| .+.++++|++|+|++|++++.
T Consensus 428 N~l~~~~p~~l--~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 505 (768)
T 3rgz_A 428 NYLSGTIPSSL--GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505 (768)
T ss_dssp SEEESCCCGGG--GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred CcccCcccHHH--hcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCc
Confidence 56667777777 456667777777777777777777777888888888888877777 477778888888888888877
Q ss_pred CCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCC-CCCCCCchhHHHHH-------------------
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCL-PSPGACDPRLNALL------------------- 139 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~-~~~~~~~~~l~~l~------------------- 139 (580)
+|.+|+.+++|+.|+|++|++++.+|. +..+.+|+.|++++|.+. .+|...+. ...+.
T Consensus 506 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 584 (768)
T 3rgz_A 506 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK-QSGKIAANFIAGKRYVYIKNDGMK 584 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGT-TTTCBCCSTTCSCEEEEEECCSCC
T ss_pred CChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhc-ccchhhhhcccccccccccccccc
Confidence 888888888888888888888776664 777778888888888766 33332211 00000
Q ss_pred ---------------------HHH-----------------HhhCCccccccccCCCCCCC-CccceeccCCcEEEEEec
Q 008026 140 ---------------------SVV-----------------KLMGYPQRFAENWKGNDPCS-DWIGVTCTKGNITVINFQ 180 (580)
Q Consensus 140 ---------------------~~~-----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~L~ls 180 (580)
.+. .....+..+....++++... ..|..+..+++|+.|+|+
T Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls 664 (768)
T 3rgz_A 585 KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLG 664 (768)
T ss_dssp TTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECC
T ss_pred ccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCc
Confidence 000 00111222333445555554 467788888999999999
Q ss_pred CCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCCC---ceeecCCCCCCCCCC
Q 008026 181 KMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKSN---AIVNTDGNPDIGKEK 257 (580)
Q Consensus 181 ~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~n~~~c~~~ 257 (580)
+|+++|.+|.+++++++|+.|||++|+++|.+|.++..++.|++||+++|+|+|.||+..+. ....+.|||++|+.+
T Consensus 665 ~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999987543 346788999999977
Q ss_pred CCCCCC
Q 008026 258 SSSFQG 263 (580)
Q Consensus 258 ~~~~~~ 263 (580)
.. .|.
T Consensus 745 l~-~C~ 749 (768)
T 3rgz_A 745 LP-RCD 749 (768)
T ss_dssp SC-CCC
T ss_pred Cc-CCC
Confidence 54 454
No 67
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=8.7e-30 Score=263.10 Aligned_cols=176 Identities=33% Similarity=0.464 Sum_probs=139.8
Q ss_pred HHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEEcCC--
Q 008026 391 RNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGN-- 466 (580)
Q Consensus 391 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~-- 466 (580)
+.+.++|++.+.||+|+||.||+|... +++.||+|++...........++.+|+.+++++. ||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 345689999999999999999999764 7899999999765555666778899999999997 999999999997654
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..|+||||++ ++|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 6899999997 588888743 368889999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCC--------------------CCccccccccCCccCccccCC
Q 008026 547 LVRLAPEGK--------------------GSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 547 ~a~~~~~~~--------------------~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+|+...... .......+||+.|+|||++.+
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 204 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence 998653211 112234679999999999876
No 68
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=254.20 Aligned_cols=173 Identities=29% Similarity=0.360 Sum_probs=144.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||+||+|+.. +++.||||++...........+...|+..+.++ +||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357999999999999999999876 799999999876544445555666677666666 899999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+ +++|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 136 ~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred Eecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9999 67998887542 2468999999999999999999998 79999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
.... ......||+.|+|||++.+
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~ 230 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG 230 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT
T ss_pred ccCC--CCcccCCCccccCHhHhcC
Confidence 4432 2234569999999999876
No 69
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.96 E-value=1.7e-29 Score=249.30 Aligned_cols=178 Identities=26% Similarity=0.419 Sum_probs=154.8
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++...+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999775 689999999987666666678899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc---EEEEeeccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLV 548 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a 548 (580)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||.+
T Consensus 84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~ 155 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155 (284)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence 9999999998887542 458899999999999999999998 89999999999999986554 999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
....... ......||+.|+|||++.+.+++
T Consensus 156 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~ 185 (284)
T 3kk8_A 156 IEVNDSE--AWHGFAGTPGYLSPEVLKKDPYS 185 (284)
T ss_dssp EECCSSC--BCCCSCSCGGGCCHHHHTTCCBC
T ss_pred EEcccCc--cccCCCCCcCCcCchhhcCCCCC
Confidence 8765433 22345799999999999887653
No 70
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.96 E-value=1.1e-29 Score=265.68 Aligned_cols=174 Identities=28% Similarity=0.385 Sum_probs=145.9
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC-----C
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----N 466 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 466 (580)
+.++|++.+.||+|+||.||+|... +++.||||++..........+++.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 3468999999999999999999765 688999999987555556678899999999999999999999999766 5
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..|+||||++ ++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence 6899999996 599888732 3468999999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCC---------------------ccccccccCCccCccccC
Q 008026 547 LVRLAPEGKGS---------------------IETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 547 ~a~~~~~~~~~---------------------~~~~~~Gt~~y~APE~~~ 575 (580)
+|+........ .....+||+.|+|||++.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 224 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 224 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHT
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHh
Confidence 99876443211 124568999999999864
No 71
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=2e-29 Score=259.14 Aligned_cols=176 Identities=23% Similarity=0.335 Sum_probs=151.2
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 3468999999999999999999775 68999999987632 33456789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC--CCcEEEEeecccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR 549 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~ 549 (580)
|||+++++|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++. .+.+||+|||+++
T Consensus 127 ~E~~~gg~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 127 LEFLSGGELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp EECCCCCBHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred EEcCCCCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccce
Confidence 999999999988742 22468999999999999999999998 89999999999999974 5779999999998
Q ss_pred ccCCCCCCccccccccCCccCccccCCCCC
Q 008026 550 LAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 550 ~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
...... ......||+.|+|||++.+.++
T Consensus 200 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~ 227 (387)
T 1kob_A 200 KLNPDE--IVKVTTATAEFAAPEIVDREPV 227 (387)
T ss_dssp ECCTTS--CEEEECSSGGGCCHHHHTTCCB
T ss_pred ecCCCc--ceeeeccCCCccCchhccCCCC
Confidence 765432 2334579999999999987765
No 72
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.96 E-value=4e-30 Score=253.73 Aligned_cols=176 Identities=27% Similarity=0.418 Sum_probs=148.1
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.++|++.+.||+|+||.||+|.+.++..||+|++..... ..+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 357999999999999999999998888999999976432 34678999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++++|.+++... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 100 YMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred ccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999988542 2358899999999999999999998 8999999999999999999999999999986644
Q ss_pred CCCCccccccccCCccCccccCCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..........||+.|+|||++.+.++
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~ 198 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKF 198 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCC
T ss_pred cccccccCCccCcccCCHHHhccCCC
Confidence 32222223456888999999876654
No 73
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.96 E-value=1.7e-29 Score=253.46 Aligned_cols=178 Identities=26% Similarity=0.385 Sum_probs=137.0
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|++++++++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 467999999999999999999765 68999999997643 2334567889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhh-CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 473 EYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
||++ ++|.+++...... ....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 5999988654322 22458899999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
..... ......||+.|+|||++.+.
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~ 183 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGS 183 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTC
T ss_pred CCCcc-cCCCCcccccccCchHhhCC
Confidence 43322 22345789999999998764
No 74
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.96 E-value=9.7e-30 Score=267.76 Aligned_cols=176 Identities=31% Similarity=0.468 Sum_probs=153.3
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|.+.+.||+|+||.||+|+.. +|+.||||++...... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 367999999999999999999876 7999999999764322 23456789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 95 MEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 999999999998832 3468999999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... .....+||+.|+|||++.+..+
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~ 192 (476)
T 2y94_A 167 SDGE--FLRTSCGSPNYAAPEVISGRLY 192 (476)
T ss_dssp CTTC--CBCCCCSCSTTCCHHHHTTCCB
T ss_pred cccc--cccccCCCcCeEChhhccCCCC
Confidence 5432 2344679999999999987654
No 75
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.96 E-value=9e-30 Score=268.32 Aligned_cols=175 Identities=27% Similarity=0.372 Sum_probs=144.1
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC------
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG------ 465 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 465 (580)
..++|++.+.||+|+||.||+|... +++.||||++..........+++.+|+.+++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999765 689999999987655566677899999999999999999999999654
Q ss_pred CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEee
Q 008026 466 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 545 (580)
Q Consensus 466 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 545 (580)
...|+||||+++ ++.+.+. ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CeEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEE
Confidence 356999999976 5655552 248899999999999999999998 89999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 546 GLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 546 g~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|+|+...... .....+||+.|+|||++.+.+|+
T Consensus 209 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 241 (464)
T 3ttj_A 209 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYK 241 (464)
T ss_dssp CCC-----CC--CC----CCCTTCCHHHHTTCCCC
T ss_pred EeeeecCCCc--ccCCCcccccccCHHHHcCCCCC
Confidence 9998765432 23456899999999999988764
No 76
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.96 E-value=2.8e-30 Score=258.57 Aligned_cols=180 Identities=26% Similarity=0.408 Sum_probs=144.0
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe---
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE--- 467 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 467 (580)
+.++|++.+.||+|+||.||+|+. .+++.||+|++..... .......+.+|++++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 346899999999999999999986 4789999999976533 23445678999999999999999999999876543
Q ss_pred -eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 468 -KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 468 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
.|+||||+++++|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred ccEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 39999999999999988531 368899999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCC--ccccccccCCccCccccCCCCCC
Q 008026 547 LVRLAPEGKGS--IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 547 ~a~~~~~~~~~--~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+++........ ......||+.|+|||++.+..++
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 197 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCC
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCC
Confidence 99866443221 12335699999999999877653
No 77
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=9.3e-30 Score=255.97 Aligned_cols=170 Identities=30% Similarity=0.471 Sum_probs=144.8
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC----eeEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----EKLL 470 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~l 470 (580)
++|++.+.||+|+||.||+|+.. ++.||||++... ........+|+.++++++||||+++++++.... ..++
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 57999999999999999999876 899999998653 233455677999999999999999999998754 3699
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCC----------CcEecCCCCCCeEecCCCcE
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ----------SFIHRDLKPSNILLGDDMRA 540 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~----------~ivH~Dlkp~NIll~~~~~~ 540 (580)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+
T Consensus 100 v~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred EEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 9999999999999843 358999999999999999999997 6 99999999999999999999
Q ss_pred EEEeeccccccCCCCCC-ccccccccCCccCccccCCC
Q 008026 541 KVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 541 kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~ 577 (580)
||+|||+++........ ......||+.|+|||++.+.
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 208 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTC
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccc
Confidence 99999999876543321 22335799999999998863
No 78
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.96 E-value=8.5e-30 Score=260.17 Aligned_cols=173 Identities=25% Similarity=0.309 Sum_probs=141.5
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 367999999999999999999876 789999999976432 2356889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc--EEEEeeccccc
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR--AKVADFGLVRL 550 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 550 (580)
||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++.
T Consensus 96 e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 96 EYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp ECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 99999999988843 1358999999999999999999998 89999999999999987665 99999999975
Q ss_pred cCCCCCCccccccccCCccCccccCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..... ......||+.|+|||++.+..+
T Consensus 168 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~ 194 (361)
T 3uc3_A 168 SVLHS--QPKSTVGTPAYIAPEVLLRQEY 194 (361)
T ss_dssp ---------------CTTSCHHHHHCSSC
T ss_pred ccccC--CCCCCcCCCCcCChhhhcCCCC
Confidence 43322 2234579999999999887665
No 79
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.96 E-value=1.8e-30 Score=273.13 Aligned_cols=180 Identities=28% Similarity=0.390 Sum_probs=143.2
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
..++|++.+.||+|+||.||+|+.. +++.||+|++..... .......+.+|+++++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999765 789999999976432 23345677889999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++++|.+++.. ...+++..+..++.||+.||+|||+ ..+|+||||||+|||++.++.+||+|||+|+.
T Consensus 226 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EECCCSSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEeeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 9999999999988843 1368899999999999999999995 26899999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCccCccccCCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... ......+||+.|+|||++.+..|+
T Consensus 299 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 327 (446)
T 4ejn_A 299 GIKDG-ATMKTFCGTPEYLAPEVLEDNDYG 327 (446)
T ss_dssp TCC------CCSSSCGGGCCHHHHHTSCCC
T ss_pred ccCCC-cccccccCCccccCHhhcCCCCCC
Confidence 44332 223446899999999999877664
No 80
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.96 E-value=1.7e-29 Score=258.21 Aligned_cols=181 Identities=27% Similarity=0.331 Sum_probs=153.4
Q ss_pred eHHHHHHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-----CCccccee
Q 008026 386 SIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-----HRHLVALL 459 (580)
Q Consensus 386 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~ 459 (580)
..++...+.++|++.+.||+|+||.||+|+.. +++.||||++.. .......+..|+++++.++ ||||++++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 33444556789999999999999999999874 689999999864 2334567788999999996 99999999
Q ss_pred eEEEcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC---
Q 008026 460 GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--- 536 (580)
Q Consensus 460 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~--- 536 (580)
+++...+..++||||+ +++|.+++.. .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITR---NNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTC
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccc
Confidence 9999999999999999 8999998854 223458899999999999999999998 89999999999999975
Q ss_pred ----------------------CCcEEEEeeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 537 ----------------------DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 537 ----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++.+||+|||+|+...... ....||+.|+|||++.+.+|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~ 237 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWD 237 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCC
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCC
Confidence 7889999999998654322 345789999999999887764
No 81
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.96 E-value=2e-29 Score=252.23 Aligned_cols=174 Identities=25% Similarity=0.327 Sum_probs=144.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 468999999999999999999875 5899999998765545555677889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++++|.+++. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.++...
T Consensus 82 e~~~~~~l~~~~~-----~~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDR-----YQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHH-----TSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHh-----hhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 9999999887763 23468999999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCCccccccccCCccCccccCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
.... ......||+.|+|||++.+
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~ 176 (311)
T 4agu_A 154 GPSD-YYDDEVATRWYRSPELLVG 176 (311)
T ss_dssp -------------GGGCCHHHHHT
T ss_pred Cccc-ccCCCcCCccccChHHHhc
Confidence 3322 2334578999999999865
No 82
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=7.4e-30 Score=261.71 Aligned_cols=177 Identities=25% Similarity=0.432 Sum_probs=139.8
Q ss_pred cCCcccceeeccCcEEEEEEEEc----CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
++|++.+.||+|+||.||+|+.. ++..||||+++... .....+++.+|++++++++||||+++++++...+..++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 57999999999999999999765 46789999997642 44556789999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++++|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 124 v~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 124 VTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999843 23468999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCCcc--ccccccCCccCccccCCCCC
Q 008026 551 APEGKGSIE--TRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 551 ~~~~~~~~~--~~~~Gt~~y~APE~~~~~~~ 579 (580)
......... ....+|+.|+|||++.+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 227 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227 (373)
T ss_dssp -----------------CTTSCHHHHHHCCC
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCc
Confidence 654322111 12345788999999877665
No 83
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.96 E-value=5.2e-30 Score=260.22 Aligned_cols=185 Identities=31% Similarity=0.474 Sum_probs=152.5
Q ss_pred HHhhcCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc
Q 008026 391 RNVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 464 (580)
Q Consensus 391 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 464 (580)
....++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 445678999999999999999999874 34889999997642 34456789999999999999999999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhh-------------------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEec
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEE-------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHR 525 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~ 525 (580)
.+..++||||+++++|.+++...... ....+++.+++.++.||+.||+|||+ .+|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 99999999999999999998653211 12568999999999999999999998 899999
Q ss_pred CCCCCCeEecCCCcEEEEeeccccccCCCCC-CccccccccCCccCccccCCCCC
Q 008026 526 DLKPSNILLGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 526 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..+
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 253 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY 253 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCc
Confidence 9999999999999999999999976533211 12233568999999999876654
No 84
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.96 E-value=2.2e-29 Score=253.40 Aligned_cols=167 Identities=28% Similarity=0.367 Sum_probs=127.3
Q ss_pred cceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEEcCCeeEEEEEecCC
Q 008026 400 ENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQ 477 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 477 (580)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....|+||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 378999999999999775 6899999998652 3467789999999997 99999999999999999999999999
Q ss_pred CChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC---cEEEEeeccccccCCC
Q 008026 478 GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKVADFGLVRLAPEG 554 (580)
Q Consensus 478 g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~ 554 (580)
++|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.....
T Consensus 91 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 91 GELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999998843 2468999999999999999999998 8999999999999998665 7999999999876543
Q ss_pred CCCccccccccCCccCccccCCCCCC
Q 008026 555 KGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 555 ~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.. .....+||+.|+|||++.+.+|+
T Consensus 163 ~~-~~~~~~~t~~y~aPE~~~~~~~~ 187 (325)
T 3kn6_A 163 NQ-PLKTPCFTLHYAAPELLNQNGYD 187 (325)
T ss_dssp ----------------------CCCC
T ss_pred CC-cccccCCCcCccCHHHhcCCCCC
Confidence 32 23345789999999999887764
No 85
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=259.07 Aligned_cols=183 Identities=29% Similarity=0.420 Sum_probs=152.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEc--------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEc
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 464 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 464 (580)
.++|++.+.||+|+||.||+|+.. ++..||+|++... .......++.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 367899999999999999999753 2357999999764 3445567899999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhh-----------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeE
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 533 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIl 533 (580)
.+..++||||+++++|.+++...... ....+++.+++.++.||+.||+|||+ .+|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence 99999999999999999998653211 12358999999999999999999998 89999999999999
Q ss_pred ecCCCcEEEEeeccccccCCCCC-CccccccccCCccCccccCCCCCC
Q 008026 534 LGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 534 l~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++.++.+||+|||+++....... .......||+.|+|||++.+..++
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 271 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 271 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCC
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCC
Confidence 99999999999999986654321 122334578999999998876653
No 86
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=256.44 Aligned_cols=174 Identities=29% Similarity=0.429 Sum_probs=135.6
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|+.. +++.||+|++.... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 4578999999999999999999876 58899999997532 345688999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC---CCcEEEEeeccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGLV 548 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a 548 (580)
|||+++++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++
T Consensus 127 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 127 LELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp ECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 999999999988842 3468999999999999999999998 89999999999999975 889999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+...... ......||+.|+|||++.+..++
T Consensus 199 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 228 (349)
T 2w4o_A 199 KIVEHQV--LMKTVCGTPGYCAPEILRGCAYG 228 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCC
T ss_pred cccCccc--ccccccCCCCccCHHHhcCCCCC
Confidence 8664332 22345799999999999887653
No 87
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.96 E-value=7.4e-30 Score=257.97 Aligned_cols=178 Identities=27% Similarity=0.358 Sum_probs=152.1
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh------hhHHHHHHHHHHHHhcCCCcccceeeEEEc
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG------KGLTEFKSEIAVLTKVRHRHLVALLGHCLD 464 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 464 (580)
...++|++.+.||+|+||.||+|+.. +++.||||++....... .....+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 35578999999999999999999764 78999999998654221 134467789999999999999999999999
Q ss_pred CCeeEEEEEecCCC-ChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEE
Q 008026 465 GNEKLLVFEYMPQG-TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 543 (580)
Q Consensus 465 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 543 (580)
.+..++||||+.+| +|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999776 99888732 3468999999999999999999998 899999999999999999999999
Q ss_pred eeccccccCCCCCCccccccccCCccCccccCCCCC
Q 008026 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 544 Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
|||+++...... ......||+.|+|||++.+..+
T Consensus 173 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~ 206 (335)
T 3dls_A 173 DFGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPY 206 (335)
T ss_dssp CCTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCB
T ss_pred ecccceECCCCC--ceeccCCCccccChhhhcCCCC
Confidence 999998765443 2334679999999999987664
No 88
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.96 E-value=4.1e-29 Score=251.22 Aligned_cols=178 Identities=26% Similarity=0.373 Sum_probs=153.1
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh----hhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
+.++|++.+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3467999999999999999999875 68999999997653322 135789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC----cEEEE
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 543 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~ 543 (580)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 9999999999999998843 3468999999999999999999998 8999999999999999887 79999
Q ss_pred eeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 544 Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|||+++...... ......||+.|+|||++.+..++
T Consensus 162 Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 196 (321)
T 2a2a_A 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLG 196 (321)
T ss_dssp CCTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCC
T ss_pred cCccceecCccc--cccccCCCCCccCcccccCCCCC
Confidence 999998765432 22345699999999999877653
No 89
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.96 E-value=7.4e-29 Score=245.01 Aligned_cols=176 Identities=26% Similarity=0.385 Sum_probs=151.4
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 470 (580)
..++|++.+.||+|+||.||+|... +++.||+|++...........++.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567999999999999999999876 799999999987655555677889999999999 89999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC-------------
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD------------- 537 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~------------- 537 (580)
||||+++++|.+++...... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999998654332 2468999999999999999999998 899999999999999844
Q ss_pred ------CcEEEEeeccccccCCCCCCccccccccCCccCccccCCC
Q 008026 538 ------MRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 538 ------~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
..+||+|||.+....... ...||+.|+|||++.+.
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~ 205 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQEN 205 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTC
T ss_pred cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCC
Confidence 479999999998765432 23589999999999765
No 90
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.96 E-value=2.1e-29 Score=254.36 Aligned_cols=175 Identities=20% Similarity=0.267 Sum_probs=149.2
Q ss_pred hcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 46799999999999999999976 4789999999875422 24578999999999 899999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc-----EEEEeec
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-----AKVADFG 546 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg 546 (580)
|||+ +++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||
T Consensus 84 ~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 9999 99999988542 3478999999999999999999998 89999999999999998877 9999999
Q ss_pred cccccCCCCCCc------cccccccCCccCccccCCCCCC
Q 008026 547 LVRLAPEGKGSI------ETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 547 ~a~~~~~~~~~~------~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+++......... .....||+.|+|||++.+.+++
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 195 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQS 195 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCC
Confidence 998764433211 2346799999999999987764
No 91
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.96 E-value=9.2e-30 Score=260.13 Aligned_cols=190 Identities=26% Similarity=0.378 Sum_probs=153.8
Q ss_pred HHHHHHhhcCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCccccee
Q 008026 387 IQVLRNVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALL 459 (580)
Q Consensus 387 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~ 459 (580)
........++|++.+.||+|+||.||+|++. +++.||||++... ......+.+.+|+++++++ +||||++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3445556688999999999999999999742 4688999999763 2344567899999999999 699999999
Q ss_pred eEEEcCCe-eEEEEEecCCCChhHHHHHHhhhC-----------------------------------------------
Q 008026 460 GHCLDGNE-KLLVFEYMPQGTLSRHIFNWAEEG----------------------------------------------- 491 (580)
Q Consensus 460 ~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~----------------------------------------------- 491 (580)
+++.+.+. .++||||+++|+|.+++.......
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 99987654 899999999999999986532210
Q ss_pred --------------CCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCCCCC-
Q 008026 492 --------------LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG- 556 (580)
Q Consensus 492 --------------~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 556 (580)
...+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 1228899999999999999999998 8999999999999999999999999999986644322
Q ss_pred CccccccccCCccCccccCCCCCC
Q 008026 557 SIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 557 ~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
.......||+.|+|||++.+..++
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~ 273 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYT 273 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCC
T ss_pred hhccccCCCceeEChhhhcCCCCC
Confidence 223345689999999998776653
No 92
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.96 E-value=4e-29 Score=251.06 Aligned_cols=174 Identities=25% Similarity=0.386 Sum_probs=147.5
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC--eeEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN--EKLL 470 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 470 (580)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 357999999999999999999876 589999999976432 234567889999999999999999999998765 6799
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe----cCCCcEEEEeec
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMRAKVADFG 546 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg 546 (580)
||||+++++|.+++..... ...+++.+++.++.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEeCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 9999999999999865322 2348999999999999999999998 899999999999999 777889999999
Q ss_pred cccccCCCCCCccccccccCCccCccccC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
+++....... .....||+.|+|||++.
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~ 188 (319)
T 4euu_A 162 AARELEDDEQ--FVSLYGTEEYLHPDMYE 188 (319)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCCHHHHH
T ss_pred CceecCCCCc--eeecccCCCccCHHHhh
Confidence 9987654432 23457999999999875
No 93
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=1.2e-28 Score=246.09 Aligned_cols=188 Identities=43% Similarity=0.717 Sum_probs=159.2
Q ss_pred eeeeHHHHHHhhcCCccc------ceeeccCcEEEEEEEEcCCcEEEEEEeeccc--cChhhHHHHHHHHHHHHhcCCCc
Q 008026 383 MVISIQVLRNVTNNFSEE------NILGRGGFGTVYKGELHDGTKIAVKRMEAGV--ISGKGLTEFKSEIAVLTKVRHRH 454 (580)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~n 454 (580)
..+...++..++++|... +.||+|+||.||+|.. +++.||+|++.... ......+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 456778888888888776 8999999999999986 58899999987542 12344678999999999999999
Q ss_pred ccceeeEEEcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe
Q 008026 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL 534 (580)
Q Consensus 455 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll 534 (580)
|+++++++...+..++||||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEE
Confidence 9999999999999999999999999999885432 23468999999999999999999998 899999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCC-ccccccccCCccCccccCC
Q 008026 535 GDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 535 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~ 576 (580)
+.++.+||+|||+++........ ......||+.|+|||++.+
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~ 209 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG 209 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC
Confidence 99999999999999876543222 2233579999999998865
No 94
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.96 E-value=1.9e-29 Score=253.80 Aligned_cols=185 Identities=30% Similarity=0.467 Sum_probs=137.2
Q ss_pred hhcCCcccceeeccCcEEEEEEEEcC-C---cEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELHD-G---TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
..++|++.+.||+|+||.||+|+... + ..||+|++..........+++.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34689999999999999999997653 3 2799999987655556678899999999999999999999999887655
Q ss_pred ------EEEEEecCCCChhHHHHHHhhh-CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEE
Q 008026 469 ------LLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 541 (580)
Q Consensus 469 ------~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 541 (580)
++||||+++++|.+++...... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEE
Confidence 9999999999999998654322 22358999999999999999999998 8999999999999999999999
Q ss_pred EEeeccccccCCCCCC-ccccccccCCccCccccCCCCCC
Q 008026 542 VADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 542 l~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|+|||+++........ ......||+.|+|||++.+..++
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 217 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYT 217 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCC
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCC
Confidence 9999999866443221 12234568899999998776553
No 95
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.96 E-value=1.7e-29 Score=277.59 Aligned_cols=179 Identities=26% Similarity=0.331 Sum_probs=153.6
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 469 (580)
..++|++.+.||+|+||.||+|+.. +++.||||++.+... .....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3568999999999999999999775 688999999986432 233456788899999988 6999999999999999999
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++|+|.+++... ..+++.+++.++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+
T Consensus 419 lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceee
Confidence 999999999999988542 368999999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 550 LAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 550 ~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
...... ......+||+.|+|||++.+.+|+
T Consensus 491 ~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~ 520 (674)
T 3pfq_A 491 ENIWDG-VTTKTFCGTPDYIAPEIIAYQPYG 520 (674)
T ss_dssp ECCCTT-CCBCCCCSCSSSCCHHHHTCCCBS
T ss_pred ccccCC-cccccccCCCcccCHhhhcCCCCC
Confidence 643332 234457899999999999887764
No 96
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.96 E-value=4.3e-29 Score=249.24 Aligned_cols=172 Identities=28% Similarity=0.507 Sum_probs=142.4
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.++|++.+.||+|+||.||+|+.. ..+|+|+++.........+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357999999999999999999764 46899998765555566788999999999999999999999865 456899999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++++|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 112 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999988842 33578999999999999999999998 8999999999999999999999999999976543
Q ss_pred CC-CCccccccccCCccCccccC
Q 008026 554 GK-GSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 554 ~~-~~~~~~~~Gt~~y~APE~~~ 575 (580)
.. ........||+.|+|||++.
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~ 207 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIR 207 (307)
T ss_dssp ---------CCCCTTSCCHHHHH
T ss_pred ccccccccCCCCCcceECcceee
Confidence 21 12223457999999999985
No 97
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=7.3e-30 Score=260.22 Aligned_cols=175 Identities=25% Similarity=0.355 Sum_probs=149.5
Q ss_pred cCCcccceeeccCcEEEEEEEE----cCCcEEEEEEeecccc--ChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCe
Q 008026 395 NNFSEENILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVI--SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNE 467 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 467 (580)
++|++.+.||+|+||.||+|+. .+++.||||+++.... .....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999987 3689999999875432 122345677899999999 69999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 547 (580)
.++||||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred EEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999988542 358899999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCccCccccCCC
Q 008026 548 VRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 548 a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
++.............+||+.|+|||++.+.
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 235 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGG 235 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTC
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCC
Confidence 987644333333456799999999999863
No 98
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.96 E-value=1e-29 Score=260.25 Aligned_cols=183 Identities=26% Similarity=0.355 Sum_probs=150.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
.++|++.+.||+|+||.||+|++. ++..||||++... .......++.+|+.++++++||||+++++++.....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 357899999999999999999843 4678999998653 344456678999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhh--CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC---cEEE
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEE--GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKV 542 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 542 (580)
.++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ .+|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEE
Confidence 99999999999999998654321 22458899999999999999999998 8999999999999999554 5999
Q ss_pred EeeccccccCCCC-CCccccccccCCccCccccCCCCCC
Q 008026 543 ADFGLVRLAPEGK-GSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 543 ~Dfg~a~~~~~~~-~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+|||+|+...... ........||+.|+|||++.+..++
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 264 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFT 264 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCC
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCC
Confidence 9999997543211 1122335689999999998776653
No 99
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.96 E-value=1.1e-29 Score=252.04 Aligned_cols=178 Identities=28% Similarity=0.524 Sum_probs=144.9
Q ss_pred hcCCcccceeeccCcEEEEEEEE-----cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC--C
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--N 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~ 466 (580)
.++|++.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 36799999999999999999974 26889999998753 344567899999999999999999999998654 5
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..++||||+++++|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred ceEEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCc
Confidence 589999999999999998542 2358899999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCC--CccccccccCCccCccccCCCCCC
Q 008026 547 LVRLAPEGKG--SIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 547 ~a~~~~~~~~--~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+++....... .......||..|+|||++.+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 195 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFS 195 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCC
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCC
Confidence 9987644322 112234578889999998776653
No 100
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.96 E-value=9.7e-30 Score=250.73 Aligned_cols=177 Identities=22% Similarity=0.341 Sum_probs=136.9
Q ss_pred hcCCcccceeeccCcEEEEEEEEcC----CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
.++|++.+.||+|+||.||+|.... +..||+|++... ......+.+.+|+.++++++||||+++++++. .+..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4679999999999999999997642 457999988653 23445678999999999999999999999974 56789
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEECCTTEEHHHHHHH----TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccc
Confidence 99999999999998853 22468899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCccCccccCCCCC
Q 008026 550 LAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 550 ~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..............||+.|+|||++.+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 194 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRF 194 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCC
Confidence 765433222333457889999999876654
No 101
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.96 E-value=1.3e-29 Score=255.63 Aligned_cols=177 Identities=24% Similarity=0.336 Sum_probs=139.5
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
...++|++.+.||+|+||.||+|... +++.||+|++............+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34578999999999999999999765 78999999997654444455678899999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec-----CCCcEEEEee
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-----DDMRAKVADF 545 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~-----~~~~~kl~Df 545 (580)
||||+++ +|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ ..+.+||+||
T Consensus 111 v~e~~~~-~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEECCSE-EHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEecCCC-CHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 9999974 99888743 2358899999999999999999998 8999999999999994 4556999999
Q ss_pred ccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 546 GLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 546 g~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
|+++....... ......||+.|+|||++.+..
T Consensus 182 g~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~ 213 (329)
T 3gbz_A 182 GLARAFGIPIR-QFTHEIITLWYRPPEILLGSR 213 (329)
T ss_dssp THHHHHC------------CCTTCCHHHHTTCC
T ss_pred CCccccCCccc-ccCCCcCCccccCHHHhcCCC
Confidence 99987643322 223457899999999987743
No 102
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.96 E-value=2.1e-29 Score=255.70 Aligned_cols=173 Identities=23% Similarity=0.334 Sum_probs=145.3
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCC--CcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH--RHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|...+++.||+|++..........+.+.+|++++++++| |||+++++++......++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35699999999999999999988889999999998765566667889999999999986 9999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
||+ .+++|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++..
T Consensus 88 ~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp ECC-CSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EeC-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 994 57899998843 2468899999999999999999998 8999999999999997 578999999999876
Q ss_pred CCCCCC-ccccccccCCccCccccCC
Q 008026 552 PEGKGS-IETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 552 ~~~~~~-~~~~~~Gt~~y~APE~~~~ 576 (580)
...... ......||+.|+|||++.+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~ 183 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKD 183 (343)
T ss_dssp ------------CCCCSSCCHHHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhh
Confidence 543322 2234679999999999854
No 103
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.96 E-value=3.6e-29 Score=249.08 Aligned_cols=170 Identities=25% Similarity=0.450 Sum_probs=142.3
Q ss_pred hhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHh--cCCCcccceeeEEEcC----C
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCLDG----N 466 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~----~ 466 (580)
+.++|++.+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++... .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 457899999999999999999987 5899999998652 33556667777776 7899999999986542 4
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHH--------hCCCCCcEecCCCCCCeEecCCC
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH--------GLAHQSFIHRDLKPSNILLGDDM 538 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH--------~~~~~~ivH~Dlkp~NIll~~~~ 538 (580)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| + .+|+||||||+|||++.++
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTS
T ss_pred eeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCC
Confidence 57999999999999999832 46899999999999999999999 6 8999999999999999999
Q ss_pred cEEEEeeccccccCCCCCCc---cccccccCCccCccccCCC
Q 008026 539 RAKVADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 539 ~~kl~Dfg~a~~~~~~~~~~---~~~~~Gt~~y~APE~~~~~ 577 (580)
.+||+|||+|+......... .....||+.|+|||++.+.
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 192 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTC
T ss_pred CEEEeeCCCeeecccccccccccccccccccceeChhhhcCc
Confidence 99999999997665433221 1234799999999999875
No 104
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.96 E-value=1.5e-29 Score=266.44 Aligned_cols=177 Identities=25% Similarity=0.422 Sum_probs=149.0
Q ss_pred hhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
..++|++.+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 346789999999999999999999888999999997643 34678999999999999999999999986 56789999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++|+|.+++..... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 262 e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp CCCTTCBHHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred eecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999864322 247788999999999999999998 899999999999999999999999999998764
Q ss_pred CCCCCccccccccCCccCccccCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
...........+|+.|+|||++.+..+
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~ 362 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSF 362 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCC
T ss_pred CCceeccCCCcccccccCHHHhccCCC
Confidence 322111222346788999999876655
No 105
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.96 E-value=6.9e-29 Score=248.01 Aligned_cols=179 Identities=29% Similarity=0.403 Sum_probs=144.7
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccC---hhhHHHHHHHHHHHHhcC---CCcccceeeEEEcC
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS---GKGLTEFKSEIAVLTKVR---HRHLVALLGHCLDG 465 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 465 (580)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999986 47899999998753321 122346677777777664 99999999999876
Q ss_pred C-----eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcE
Q 008026 466 N-----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 540 (580)
Q Consensus 466 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 540 (580)
. ..++||||++ ++|.+++.. .....+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDK---APPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHT---CCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCE
Confidence 5 4789999996 599988843 222348999999999999999999998 899999999999999999999
Q ss_pred EEEeeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 541 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 541 kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
||+|||+++...... ......||+.|+|||++.+..++
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 197 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYA 197 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCC
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCC
Confidence 999999998764432 23446799999999999877653
No 106
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.96 E-value=6.8e-29 Score=245.21 Aligned_cols=176 Identities=28% Similarity=0.392 Sum_probs=146.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|.+.+.||+|+||.||+|+.. ++..||+|++.... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 357999999999999999999775 68999999997643 3334678999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec---CCCcEEEEeecccc
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLVR 549 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~ 549 (580)
||+++++|.+++...... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++ .++.+||+|||+++
T Consensus 100 e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 100 ETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp CCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 999999999988664433 2568999999999999999999998 8999999999999994 56789999999998
Q ss_pred ccCCCCCCccccccccCCccCccccCC
Q 008026 550 LAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 550 ~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
...... ......||+.|+|||++.+
T Consensus 176 ~~~~~~--~~~~~~~t~~y~aPE~~~~ 200 (285)
T 3is5_A 176 LFKSDE--HSTNAAGTALYMAPEVFKR 200 (285)
T ss_dssp C------------CTTGGGCCHHHHTT
T ss_pred ecCCcc--cCcCcccccCcCChHHhcc
Confidence 664432 2234578999999999864
No 107
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.96 E-value=3e-29 Score=252.85 Aligned_cols=186 Identities=28% Similarity=0.350 Sum_probs=154.3
Q ss_pred HHHHHHhhcCCccc-ceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEE
Q 008026 387 IQVLRNVTNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCL 463 (580)
Q Consensus 387 ~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 463 (580)
++..+.+.++|.+. +.||+|+||.||+|... +++.||+|++............+.+|+.+++.++ ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 34455667788887 89999999999999776 6899999999876555555678999999999996 799999999999
Q ss_pred cCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC---CCcE
Q 008026 464 DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRA 540 (580)
Q Consensus 464 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~ 540 (580)
..+..++||||+++++|.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++.+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCE
T ss_pred eCCeEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcE
Confidence 99999999999999999988733 223568999999999999999999998 89999999999999987 7899
Q ss_pred EEEeeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 541 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 541 kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
||+|||+++...... ......||+.|+|||++.+.+++
T Consensus 174 kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 211 (327)
T 3lm5_A 174 KIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPIT 211 (327)
T ss_dssp EECCGGGCEEC-----------CCCGGGCCHHHHTTCCCC
T ss_pred EEeeCccccccCCcc--ccccccCCcCccCCeeecCCCCC
Confidence 999999998765432 22345799999999999887653
No 108
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.96 E-value=2e-29 Score=249.33 Aligned_cols=177 Identities=29% Similarity=0.445 Sum_probs=153.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|.+. ++..||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 467999999999999999999876 5889999998753 334578899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++++|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 89 EFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp ECCTTEEHHHHHHH---CCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EcCCCCcHHHHHHh---cccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999854 233568999999999999999999998 799999999999999999999999999998765
Q ss_pred CCCCCccccccccCCccCccccCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
...........||+.|+|||++.+..+
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~ 189 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKF 189 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCC
T ss_pred CCccccccCCccccCcCChhhhccCCC
Confidence 544333344567889999999876654
No 109
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=2.1e-29 Score=246.17 Aligned_cols=175 Identities=30% Similarity=0.447 Sum_probs=150.1
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEe
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 474 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 474 (580)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 57899999999999999999988889999999976432 346789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCCC
Q 008026 475 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 554 (580)
Q Consensus 475 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 554 (580)
+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 85 MEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CTTCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHhh----CcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999998853 22468899999999999999999998 89999999999999999999999999999866432
Q ss_pred CCCccccccccCCccCccccCCCCC
Q 008026 555 KGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 555 ~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.........||+.|+|||++.+..+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~ 182 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRY 182 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCC
T ss_pred cccccccccccccccChhhhcCCCc
Confidence 2112223457889999999876554
No 110
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.96 E-value=1.1e-28 Score=244.81 Aligned_cols=177 Identities=25% Similarity=0.383 Sum_probs=152.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357999999999999999999876 588999999976543 334567789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.++..
T Consensus 94 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 94 LELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EECCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 999999999988743 1368899999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..... ......||+.|+|||++.+..+
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~ 192 (294)
T 2rku_A 166 EYDGE-RKKVLCGTPNYIAPEVLSKKGH 192 (294)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHTTSCB
T ss_pred ccCcc-ccccccCCCCcCCcchhccCCC
Confidence 43322 2334579999999999987654
No 111
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=4.9e-29 Score=249.19 Aligned_cols=178 Identities=24% Similarity=0.321 Sum_probs=143.5
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999875 6899999999764332 33457789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 113 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 9999999999988542 368899999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
............||+.|+|||++.+..+
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 212 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHA 212 (309)
T ss_dssp ------------CCGGGCCGGGTCC---
T ss_pred cccccccccccCCCcCccCHHHHcCCCC
Confidence 5443223334579999999999987654
No 112
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.96 E-value=8.1e-30 Score=262.10 Aligned_cols=177 Identities=27% Similarity=0.401 Sum_probs=148.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|++. +++.||||++... ......+++.+|++++++++||||+++++++...+..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 357899999999999999999886 7899999998753 23344567889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++|+|.+++... ...+++.+++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 192 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp ECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999998542 1357889999999999999999998 899999999999999999999999999998654
Q ss_pred CCCCCc-cccccccCCccCccccCCCC
Q 008026 553 EGKGSI-ETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 553 ~~~~~~-~~~~~Gt~~y~APE~~~~~~ 578 (580)
...... .....+++.|+|||++.+..
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~ 291 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGR 291 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCE
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCC
Confidence 321111 11123577899999986544
No 113
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.96 E-value=5.9e-29 Score=244.27 Aligned_cols=174 Identities=28% Similarity=0.444 Sum_probs=129.4
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999764 7899999999765432 334567899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+ +++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 93 e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 93 EYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred hhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 999 6788777633 2468999999999999999999998 899999999999999999999999999998664
Q ss_pred CCCCCccccccccCCccCccccCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
... ......||+.|+|||++.+..+
T Consensus 164 ~~~--~~~~~~~t~~y~aPE~~~~~~~ 188 (275)
T 2eue_A 164 DGN--FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp -------------CTTCCHHHHCC---
T ss_pred Ccc--cccCCCCCcCcCCceeeeCCCC
Confidence 432 2234569999999999987653
No 114
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3.6e-29 Score=256.12 Aligned_cols=169 Identities=28% Similarity=0.419 Sum_probs=141.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC------
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN------ 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 466 (580)
.++|++.+.||+|+||.||+|... +|+.||||++..........+++.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 468999999999999999999774 7999999999765545555678899999999999999999999997653
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..|+||||+ +++|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeee
Confidence 459999999 7899988743 368899999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+++..... ....+||+.|+|||++.+
T Consensus 174 ~a~~~~~~----~~~~~~t~~y~aPE~~~~ 199 (367)
T 1cm8_A 174 LARQADSE----MTGYVVTRWYRAPEVILN 199 (367)
T ss_dssp TCEECCSS----CCSSCSCGGGCCTHHHHT
T ss_pred cccccccc----cCcCcCCCCcCCHHHHhC
Confidence 99875432 234578999999999876
No 115
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.96 E-value=5.8e-29 Score=254.95 Aligned_cols=171 Identities=32% Similarity=0.406 Sum_probs=141.1
Q ss_pred cccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEecC
Q 008026 398 SEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMP 476 (580)
Q Consensus 398 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 476 (580)
...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 33678999999999999764 68999999997632 2455789999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe--cCCCcEEEEeeccccccCCC
Q 008026 477 QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL--GDDMRAKVADFGLVRLAPEG 554 (580)
Q Consensus 477 ~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~~~~ 554 (580)
+++|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 170 ~~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 170 GGELFDRIIDE----SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp TCEEHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred CCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 99999887541 2358899999999999999999998 899999999999999 56788999999999876543
Q ss_pred CCCccccccccCCccCccccCCCCC
Q 008026 555 KGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 555 ~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.. .....||+.|+|||++.+..+
T Consensus 243 ~~--~~~~~gt~~y~aPE~~~~~~~ 265 (373)
T 2x4f_A 243 EK--LKVNFGTPEFLAPEVVNYDFV 265 (373)
T ss_dssp CB--CCCCCSSCTTCCHHHHTTCBC
T ss_pred cc--cccccCCCcEeChhhccCCCC
Confidence 32 233569999999999987654
No 116
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.96 E-value=1.5e-29 Score=269.10 Aligned_cols=177 Identities=29% Similarity=0.442 Sum_probs=150.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|.+. ++..||||+++... ...+++.+|++++++++||||+++++++......++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 457889999999999999999876 48899999997632 24578999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++|+|.+++.. .....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 296 E~~~~g~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 296 EFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp ECCTTCBHHHHHHH---SCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EccCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999854 223468899999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCCccccccccCCccCccccCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
...........+++.|+|||++.+..+
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~ 396 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKF 396 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEE
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCC
Confidence 432222223456788999999875543
No 117
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.96 E-value=5e-29 Score=245.19 Aligned_cols=178 Identities=29% Similarity=0.500 Sum_probs=134.7
Q ss_pred hcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999977 47899999999754322 22356789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+...
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EECCTTEEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 999999999988843 23568999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..... ......||+.|+|||++.+..+
T Consensus 163 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~ 189 (278)
T 3cok_A 163 KMPHE-KHYTLCGTPNYISPEIATRSAH 189 (278)
T ss_dssp C---------------------------
T ss_pred cCCCC-cceeccCCCCcCCcchhcCCCC
Confidence 43322 2233578999999999887654
No 118
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.96 E-value=4e-29 Score=265.80 Aligned_cols=174 Identities=29% Similarity=0.421 Sum_probs=149.8
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|+.. +++.||+|++............+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4467999999999999999999875 789999999976544445567899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec---CCCcEEEEeeccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLV 548 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a 548 (580)
|||+.+++|.+.+... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||++
T Consensus 100 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 9999999999887542 468999999999999999999998 8999999999999995 4567999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+...... .....+||+.|+|||++.+
T Consensus 172 ~~~~~~~--~~~~~~gt~~y~aPE~~~~ 197 (486)
T 3mwu_A 172 TCFQQNT--KMKDRIGTAYYIAPEVLRG 197 (486)
T ss_dssp TTBCCC------CCTTGGGGCCGGGGGS
T ss_pred eECCCCC--ccCCCcCCCCCCCHHHhCC
Confidence 8765432 2334579999999999875
No 119
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=2.4e-29 Score=255.60 Aligned_cols=183 Identities=24% Similarity=0.314 Sum_probs=147.0
Q ss_pred HHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc---ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC
Q 008026 391 RNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI---SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN 466 (580)
Q Consensus 391 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 466 (580)
..+.++|++.+.||+|+||.||+|... ++..||+|++..... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 455678999999999999999999774 688999999976432 3345678999999999999999999999999999
Q ss_pred eeEEEEEecCCCChhHHHHHHhhh-----------------------------------CCCCccHHHHHHHHHHHHHHH
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEE-----------------------------------GLKPLEWNRRLTIALDVARGV 511 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~-----------------------------------~~~~~~~~~~~~i~~~i~~aL 511 (580)
..++||||+++++|.+++...... ....+++..+..++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999988421110 011246778889999999999
Q ss_pred HHHHhCCCCCcEecCCCCCCeEecCCC--cEEEEeeccccccCCCCC---CccccccccCCccCccccCC
Q 008026 512 EYLHGLAHQSFIHRDLKPSNILLGDDM--RAKVADFGLVRLAPEGKG---SIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 512 ~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~---~~~~~~~Gt~~y~APE~~~~ 576 (580)
+|||+ .+|+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||++.+
T Consensus 182 ~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 248 (345)
T 3hko_A 182 HYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248 (345)
T ss_dssp HHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC
T ss_pred HHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc
Confidence 99998 7999999999999998766 899999999986533211 12234579999999999875
No 120
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.96 E-value=4.7e-29 Score=245.53 Aligned_cols=175 Identities=30% Similarity=0.513 Sum_probs=147.5
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|... ++..||+|++...... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999765 5789999998764322 22356788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999888542 358899999999999999999997 89999999999999999999999999998654
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... .....||+.|+|||++.+..+
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~ 184 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGRMH 184 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCC
T ss_pred Cccc---ccccCCCCCccCHhHhccCCC
Confidence 3322 234578999999999987664
No 121
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.96 E-value=4.8e-29 Score=257.28 Aligned_cols=172 Identities=22% Similarity=0.331 Sum_probs=145.6
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC--CCcccceeeEEEcCCeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 472 (580)
++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 469999999999999999998888999999999876555666788999999999997 599999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
| +.+++|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++...
T Consensus 136 E-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 568899998853 2367888999999999999999997 8999999999999995 5799999999998765
Q ss_pred CCCCC-ccccccccCCccCccccCC
Q 008026 553 EGKGS-IETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 553 ~~~~~-~~~~~~Gt~~y~APE~~~~ 576 (580)
..... .....+||+.|+|||++.+
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~ 230 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKD 230 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHC
T ss_pred CCCccccCCCCCcCCCccChHHhhh
Confidence 43221 2234679999999999865
No 122
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.96 E-value=9.2e-29 Score=243.13 Aligned_cols=173 Identities=27% Similarity=0.440 Sum_probs=149.9
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|... ++..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 4567999999999999999999775 578999999976432 3457889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe---cCCCcEEEEeeccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 548 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a 548 (580)
|||+++++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 85 MELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 999999999988744 1458899999999999999999998 899999999999999 78889999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
....... ......||+.|+|||++.+.
T Consensus 157 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~ 183 (277)
T 3f3z_A 157 ARFKPGK--MMRTKVGTPYYVSPQVLEGL 183 (277)
T ss_dssp EECCTTS--CBCCCCSCTTTCCHHHHTTC
T ss_pred eeccCcc--chhccCCCCCccChHHhccc
Confidence 8765433 23345799999999998754
No 123
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.96 E-value=9.5e-29 Score=250.05 Aligned_cols=177 Identities=25% Similarity=0.384 Sum_probs=152.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|.+.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999775 578999999976543 334567789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ..+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp ECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 9999999999887431 468899999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..... ......||+.|+|||++.+..+
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~ 218 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKKGH 218 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTSCB
T ss_pred ccCcc-cccccCCCccccCHHHhccCCC
Confidence 43322 2334579999999999877654
No 124
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.96 E-value=9.4e-29 Score=255.86 Aligned_cols=172 Identities=23% Similarity=0.328 Sum_probs=136.7
Q ss_pred hcCCccc-ceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHh-cCCCcccceeeEEEc----CC
Q 008026 394 TNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK-VRHRHLVALLGHCLD----GN 466 (580)
Q Consensus 394 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~----~~ 466 (580)
.++|.+. +.||+|+||.||+|... +++.||||++... ..+.+|++++.+ .+||||+++++++.. ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 4567766 78999999999999775 6899999998642 356788888755 479999999999875 56
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC---CCcEEEE
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 543 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 543 (580)
..|+||||+++|+|.+++.. .....+++.++..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHC---C---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEEeCCCCcHHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEE
Confidence 78999999999999999854 222468999999999999999999998 89999999999999987 7889999
Q ss_pred eeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 544 Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|||+++...... .....+||+.|+|||++.+..|+
T Consensus 207 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 241 (400)
T 1nxk_A 207 DFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYD 241 (400)
T ss_dssp CCTTCEECC-------------CTTCCGGGSCCCCSS
T ss_pred ecccccccCCCC--ccccCCCCCCccCHhhcCCCCCC
Confidence 999998764332 22346799999999999887664
No 125
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.96 E-value=3.1e-29 Score=251.14 Aligned_cols=181 Identities=28% Similarity=0.423 Sum_probs=150.5
Q ss_pred hcCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
.++|.+.+.||+|+||.||+|... ++..||+|++... ......+.+.+|++++++++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 467999999999999999999752 3578999999753 244556789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhh-------------------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCC
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEE-------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 528 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlk 528 (580)
.++||||+++++|.+++...... ....+++.+++.++.||+.||+|||+ .+|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 99999999999999998653221 12348899999999999999999998 899999999
Q ss_pred CCCeEecCCCcEEEEeeccccccCCCCCC-ccccccccCCccCccccCCCC
Q 008026 529 PSNILLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 529 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~ 578 (580)
|+||+++.++.+||+|||+++........ ......||+.|+|||++.+..
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 228 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI 228 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCC
Confidence 99999999999999999999876443221 122345788999999886554
No 126
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.96 E-value=6.8e-29 Score=250.72 Aligned_cols=175 Identities=26% Similarity=0.387 Sum_probs=146.1
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357999999999999999999875 5899999999765555555677889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++++|.++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~~~~~l~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 104 EFVDHTILDDLEL-----FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp ECCSEEHHHHHHH-----STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecCCcchHHHHHh-----hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 9999988877652 23468999999999999999999998 899999999999999999999999999998654
Q ss_pred CCCCCccccccccCCccCccccCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
.... ......||+.|+|||++.+.
T Consensus 176 ~~~~-~~~~~~~t~~y~aPE~~~~~ 199 (331)
T 4aaa_A 176 APGE-VYDDEVATRWYRAPELLVGD 199 (331)
T ss_dssp ---------CCCCCTTCCHHHHTTC
T ss_pred CCcc-ccCCCcCCccccCcccccCC
Confidence 4322 22345789999999998764
No 127
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=4.7e-29 Score=245.47 Aligned_cols=181 Identities=24% Similarity=0.417 Sum_probs=151.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc--CCeeEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD--GNEKLL 470 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 470 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999775 78999999998765556667789999999999999999999998754 567899
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCC-----cEecCCCCCCeEecCCCcEEEEee
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS-----FIHRDLKPSNILLGDDMRAKVADF 545 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~Df 545 (580)
||||+++++|.+++..... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999865432 23468999999999999999999998 56 999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccCCccCccccCCCCC
Q 008026 546 GLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 546 g~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
|.++...... .......||+.|+|||++.+..+
T Consensus 161 g~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~ 193 (279)
T 2w5a_A 161 GLARILNHDT-SFAKTFVGTPYYMSPEQMNRMSY 193 (279)
T ss_dssp CHHHHC---C-HHHHHHHSCCTTCCHHHHHCC-C
T ss_pred chheeecccc-ccccccCCCccccChHHhccCCC
Confidence 9998764432 12234578999999999887655
No 128
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=3.3e-30 Score=257.96 Aligned_cols=242 Identities=24% Similarity=0.261 Sum_probs=200.0
Q ss_pred Cccccc--CCCCCccccccceEEecccCC-CCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCc
Q 008026 1 MLQLIG--GLPASFSGSQIQSLWVNGQNG-NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNF 76 (580)
Q Consensus 1 ~~~~~~--~~P~~~~~~~l~~L~~~~~~~-n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~ 76 (580)
.|++.| .+|..| .+++.|+.+++++ |.+.+..|..|.++++|++|+|++|.|++.+| .|.++++|++|+|++|+
T Consensus 59 ~~~l~~~~~~~~~l--~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 136 (313)
T 1ogq_A 59 GLNLPKPYPIPSSL--ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA 136 (313)
T ss_dssp CCCCSSCEECCGGG--GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE
T ss_pred CCCccCCcccChhH--hCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCc
Confidence 367788 899988 5678888888884 77888889999999999999999999998777 58889999999999999
Q ss_pred ccccCCccccCCCCCcEEEccCCcccccCC-CCCccc-ccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccc
Q 008026 77 FTGPVPDSLVKLESLKIVNMTNNLLQGPVP-EFDRSV-SLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAEN 154 (580)
Q Consensus 77 l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~-~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 154 (580)
+++.+|..|.++++|++|+|++|++++.+| .+..+. +|+.|++++|.+....+..+..+. +...
T Consensus 137 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~--------------L~~L 202 (313)
T 1ogq_A 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN--------------LAFV 202 (313)
T ss_dssp EESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC--------------CSEE
T ss_pred cCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc--------------ccEE
Confidence 999999999999999999999999997666 577887 899999999988755444333221 2333
Q ss_pred cCCCCCCC-CccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccc
Q 008026 155 WKGNDPCS-DWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 155 ~~~~~~~~-~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~ 233 (580)
.+.++... ..+..+..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|.++..+++|++|+|++|+++
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccc
Confidence 34444333 3455667778999999999999977665 899999999999999999999999999999999999999999
Q ss_pred ccCCCCCC---CceeecCCCCCCCCCCCC
Q 008026 234 GKIPSFKS---NAIVNTDGNPDIGKEKSS 259 (580)
Q Consensus 234 g~~p~~~~---~~~~~~~~n~~~c~~~~~ 259 (580)
|.+|.... ...+.+.+|++.|+.+..
T Consensus 282 ~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 282 GEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp EECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred ccCCCCccccccChHHhcCCCCccCCCCC
Confidence 99998732 235888999999987554
No 129
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.96 E-value=3.8e-29 Score=253.24 Aligned_cols=171 Identities=26% Similarity=0.409 Sum_probs=144.2
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeE
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 469 (580)
.+.++|++.+.||+|+||.||+|... +++.||+|++.+... ...+|++++.++ +||||+++++++.+.+..|
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 34578999999999999999999775 689999999976432 235688888888 6999999999999999999
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC----CcEEEEee
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD----MRAKVADF 545 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~Df 545 (580)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+.++ +.+||+||
T Consensus 93 lv~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Df 164 (342)
T 2qr7_A 93 VVTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDF 164 (342)
T ss_dssp EEECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred EEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence 99999999999988843 2468999999999999999999998 899999999999998533 35999999
Q ss_pred ccccccCCCCCCccccccccCCccCccccCCC
Q 008026 546 GLVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 546 g~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
|+++....... .....+||+.|+|||++.+.
T Consensus 165 g~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~ 195 (342)
T 2qr7_A 165 GFAKQLRAENG-LLMTPCYTANFVAPEVLERQ 195 (342)
T ss_dssp TTCEECBCTTC-CBCCSSCCSSCCCHHHHHHH
T ss_pred CCcccCcCCCC-ceeccCCCccccCHHHhcCC
Confidence 99987654432 23346799999999998654
No 130
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.96 E-value=4.1e-29 Score=248.84 Aligned_cols=176 Identities=26% Similarity=0.501 Sum_probs=146.0
Q ss_pred cCCcccceeeccCcEEEEEEEE-----cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC--Ce
Q 008026 395 NNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--NE 467 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 467 (580)
++|++.+.||+|+||.||+|++ .+++.||+|++.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4588999999999999999984 368999999997643 334557899999999999999999999999876 66
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 547 (580)
.++||||+++++|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccc
Confidence 89999999999999998542 2458899999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCC--CccccccccCCccCccccCCCC
Q 008026 548 VRLAPEGKG--SIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 548 a~~~~~~~~--~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
++....... .......||..|+|||++.+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 205 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSK 205 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCE
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCC
Confidence 987654432 1123356888999999886554
No 131
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.96 E-value=6.5e-29 Score=244.47 Aligned_cols=175 Identities=29% Similarity=0.469 Sum_probs=147.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.++|++.+.||+|+||.||+|...++..||+|++.... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 35799999999999999999998888899999987643 23567899999999999999999999886 456899999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.++....
T Consensus 88 ~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp CCTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999854221 258889999999999999999998 8999999999999999999999999999987654
Q ss_pred CCCCccccccccCCccCccccCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
..........|++.|+|||++.+..
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~ 186 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGT 186 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCE
T ss_pred cccccccCCCCccCccChhhhccCC
Confidence 3322223345788999999986544
No 132
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.4e-28 Score=249.02 Aligned_cols=180 Identities=24% Similarity=0.396 Sum_probs=144.3
Q ss_pred HHHHHhhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhc--CCCcccceeeEEEcC
Q 008026 388 QVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV--RHRHLVALLGHCLDG 465 (580)
Q Consensus 388 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~ 465 (580)
.....+.++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 344556678999999999999999999876 899999998642 223445566665554 899999999999887
Q ss_pred ----CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCC-----CCCcEecCCCCCCeEecC
Q 008026 466 ----NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGD 536 (580)
Q Consensus 466 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~-----~~~ivH~Dlkp~NIll~~ 536 (580)
...++||||+++++|.+++.. ..+++..++.++.|++.||+|||+.+ +.+|+||||||+||+++.
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~ 177 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence 678999999999999999843 36899999999999999999999720 129999999999999999
Q ss_pred CCcEEEEeeccccccCCCCCCc---cccccccCCccCccccCCCCC
Q 008026 537 DMRAKVADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 537 ~~~~kl~Dfg~a~~~~~~~~~~---~~~~~Gt~~y~APE~~~~~~~ 579 (580)
++.+||+|||+++......... .....||+.|+|||++.+..+
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 223 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLN 223 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCC
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccC
Confidence 9999999999997664433211 123579999999999987643
No 133
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.96 E-value=1.3e-28 Score=242.77 Aligned_cols=176 Identities=27% Similarity=0.410 Sum_probs=148.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh----hhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|++++++++||||+++++++......
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999876 68999999997654322 2367899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC----cEEEEe
Q 008026 469 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVAD 544 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~D 544 (580)
++||||+++++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp EEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred EEEEeecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEe
Confidence 999999999999998853 1368899999999999999999998 8999999999999998776 899999
Q ss_pred eccccccCCCCCCccccccccCCccCccccCCCCC
Q 008026 545 FGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 545 fg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
||.++...... ......||+.|+|||++.+..+
T Consensus 156 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~ 188 (283)
T 3bhy_A 156 FGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPL 188 (283)
T ss_dssp CTTCEECC----------CCCGGGCCHHHHTTCCC
T ss_pred cccceeccCCC--cccccCCCcCccCcceecCCCC
Confidence 99998764432 2233568999999999987665
No 134
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.96 E-value=3.6e-29 Score=263.35 Aligned_cols=176 Identities=31% Similarity=0.493 Sum_probs=143.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.++|++.+.||+|+||.||+|.+.++..||||+++.... ..+++.+|++++++++||||+++++++.. +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 457899999999999999999998788899999976432 34678999999999999999999999876 67899999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++|+|.+++..... ..+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 259 ~~~~gsL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCTTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhcCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999854222 358889999999999999999998 8999999999999999999999999999987654
Q ss_pred CCCCccccccccCCccCccccCCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..........+++.|+|||++.+..+
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~ 358 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRF 358 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCC
T ss_pred CceecccCCcccccccCHhHHhcCCC
Confidence 32222233457889999999876654
No 135
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=5.2e-29 Score=252.98 Aligned_cols=182 Identities=28% Similarity=0.412 Sum_probs=148.0
Q ss_pred hcCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCC
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGN 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 466 (580)
.++|++.+.||+|+||.||+|... ++..||+|++.... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 468999999999999999999862 45689999997532 334457899999999999 8999999999999999
Q ss_pred eeEEEEEecCCCChhHHHHHHhhh------------------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCC
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEE------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 528 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~------------------~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlk 528 (580)
..++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+ .+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 999999999999999998653210 11347899999999999999999998 899999999
Q ss_pred CCCeEecCCCcEEEEeeccccccCCCCCC-ccccccccCCccCccccCCCCC
Q 008026 529 PSNILLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 529 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
|+||+++.++.+||+|||+++........ ......||+.|+|||++.+..+
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 251 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY 251 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCC
Confidence 99999999999999999999866443322 2233567899999999876654
No 136
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.96 E-value=1.3e-28 Score=256.59 Aligned_cols=174 Identities=26% Similarity=0.409 Sum_probs=138.0
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC------hhhHHHHHHHHHHHHhcCCCcccceeeEEEc
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS------GKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 464 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 464 (580)
...++|.+.+.||+|+||.||+|... +++.||+|++...... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45678999999999999999999765 6899999999764322 1122357899999999999999999999754
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC---CcEE
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAK 541 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~k 541 (580)
+..++||||+++++|.+++. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++.+ ..+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTS-----SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred -CceEEEEEcCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEE
Confidence 56799999999999988773 23568999999999999999999998 899999999999999754 4599
Q ss_pred EEeeccccccCCCCCCccccccccCCccCccccCC
Q 008026 542 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 542 l~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
|+|||+|+...... .....+||+.|+|||++.+
T Consensus 283 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~ 315 (419)
T 3i6u_A 283 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVS 315 (419)
T ss_dssp ECCSSTTTSCC-------------CTTCCTTTTC-
T ss_pred EeecccceecCCCc--cccccCCCCCccCceeeec
Confidence 99999998764432 2344679999999999864
No 137
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.96 E-value=6.7e-29 Score=248.58 Aligned_cols=182 Identities=29% Similarity=0.420 Sum_probs=151.6
Q ss_pred hcCCcccceeeccCcEEEEEEEE------cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCC
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGN 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 466 (580)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 45799999999999999999975 246889999997542 334567899999999999 8999999999999999
Q ss_pred eeEEEEEecCCCChhHHHHHHhh-------------hCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeE
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAE-------------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 533 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIl 533 (580)
..++||||+++++|.+++..... .....+++.+++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence 99999999999999999865321 112258999999999999999999998 89999999999999
Q ss_pred ecCCCcEEEEeeccccccCCCCCC-ccccccccCCccCccccCCCCC
Q 008026 534 LGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 534 l~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
++.++.+||+|||+++........ ......||+.|+|||++.+..+
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 224 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 224 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCC
Confidence 999999999999999876544322 1223457889999999876654
No 138
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.96 E-value=1.3e-28 Score=252.49 Aligned_cols=174 Identities=26% Similarity=0.363 Sum_probs=140.3
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC------
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN------ 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 466 (580)
.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999765 6899999999875555556678899999999999999999999997665
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ceEEEEEcCCC-CHHHHHh-------hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence 67999999975 7777762 247889999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+++...... ......||+.|+|||++.+.+|+
T Consensus 173 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 204 (371)
T 2xrw_A 173 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYK 204 (371)
T ss_dssp C------------------CTTCCHHHHTTCCCC
T ss_pred ccccccccc--ccCCceecCCccCHHHhcCCCCC
Confidence 998654322 23346799999999999887653
No 139
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.96 E-value=1.5e-28 Score=258.55 Aligned_cols=172 Identities=34% Similarity=0.521 Sum_probs=146.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC-eeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN-EKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.... ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 467899999999999999999876 7899999997532 4568999999999999999999999987765 789999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++|+|.+++... +...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp ECCTTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999998642 23357889999999999999999998 899999999999999999999999999998653
Q ss_pred CCCCCccccccccCCccCccccCCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
... ....+++.|+|||++.+..++
T Consensus 341 ~~~----~~~~~~~~y~aPE~~~~~~~~ 364 (450)
T 1k9a_A 341 STQ----DTGKLPVKWTAPEALREKKFS 364 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCC
T ss_pred ccc----cCCCCCcceeCHHHhcCCCCC
Confidence 321 223578899999999877653
No 140
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.96 E-value=2.5e-28 Score=244.20 Aligned_cols=182 Identities=25% Similarity=0.426 Sum_probs=143.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccc-cChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGV-ISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|... +++.||+|++.... .......++.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 357999999999999999999764 78999999997533 2344567889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++..... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 111 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999865433 23568899999999999999999998 89999999999999999999999999999866
Q ss_pred CCCCCCccccccccCCccCccccCCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... ......||+.|+|||++.+..++
T Consensus 187 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~ 214 (310)
T 2wqm_A 187 SSKTT-AAHSLVGTPYYMSPERIHENGYN 214 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCC
T ss_pred cCCCc-cccccCCCeeEeChHHhCCCCCC
Confidence 44322 22335689999999999877653
No 141
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.96 E-value=7.6e-29 Score=264.14 Aligned_cols=174 Identities=29% Similarity=0.407 Sum_probs=144.9
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|+.. ++..||+|++............+.+|+.+++.++||||+++++++.+....|+|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3457999999999999999999875 789999999987554445567889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC---CCcEEEEeeccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGLV 548 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a 548 (580)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999998887542 458899999999999999999998 89999999999999975 455999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+...... .....+||+.|+|||++.+
T Consensus 187 ~~~~~~~--~~~~~~gt~~y~aPE~l~~ 212 (494)
T 3lij_A 187 AVFENQK--KMKERLGTAYYIAPEVLRK 212 (494)
T ss_dssp EECBTTB--CBCCCCSCTTTCCHHHHTT
T ss_pred eECCCCc--cccccCCCcCeeCHHHHcc
Confidence 8765432 2334579999999999864
No 142
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.96 E-value=1.6e-28 Score=241.15 Aligned_cols=178 Identities=27% Similarity=0.405 Sum_probs=152.0
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 3467999999999999999999875 789999999976432 33457889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 84 LEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 999999999988732 3468899999999999999999998 89999999999999999999999999999765
Q ss_pred CCCC-CCccccccccCCccCccccCCCCC
Q 008026 552 PEGK-GSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~-~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... ........||+.|+|||++.+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 184 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREF 184 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSB
T ss_pred CCCcchhcccCCccccCccChHHHhcCCC
Confidence 4322 112234578999999999987653
No 143
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.96 E-value=1.9e-28 Score=261.78 Aligned_cols=174 Identities=27% Similarity=0.406 Sum_probs=146.7
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh-----------hhHHHHHHHHHHHHhcCCCcccceee
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG-----------KGLTEFKSEIAVLTKVRHRHLVALLG 460 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~~~~ 460 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999875 68899999997643321 33567899999999999999999999
Q ss_pred EEEcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC--
Q 008026 461 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-- 538 (580)
Q Consensus 461 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 538 (580)
++.+....++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999888541 468999999999999999999998 8999999999999998765
Q ss_pred -cEEEEeeccccccCCCCCCccccccccCCccCccccCC
Q 008026 539 -RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 539 -~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
.+||+|||+++...... ......||+.|+|||++.+
T Consensus 186 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~ 222 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLKK 222 (504)
T ss_dssp SSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTT
T ss_pred ccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhcc
Confidence 69999999998765432 2334579999999999874
No 144
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.96 E-value=6.1e-29 Score=243.36 Aligned_cols=171 Identities=21% Similarity=0.328 Sum_probs=148.6
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC--CeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--NEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 472 (580)
++|++.+.||+|+||.||+|++. ++.||+|++..........+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57999999999999999999885 89999999987655666677899999999999999999999999887 7789999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||+++++|.+++.. .....+++.+++.++.|++.||+|||+ .+ |+||||||+||+++.++.++|+|||++..
T Consensus 89 e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 89 HWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp ECCTTCBHHHHHHS---CSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred cccCCCcHHHHHhh---cccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999853 222358999999999999999999997 67 99999999999999999999999998764
Q ss_pred cCCCCCCccccccccCCccCccccCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
... ....||+.|+|||++.+..
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~ 184 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKP 184 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCG
T ss_pred ecc------cCccCCccccChhhhccCC
Confidence 322 2246899999999987654
No 145
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.96 E-value=8.2e-29 Score=263.42 Aligned_cols=174 Identities=28% Similarity=0.415 Sum_probs=151.4
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
+.++|++.+.||+|+||.||+|+.. +++.||||++...... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467999999999999999999876 7899999999765432 3456789999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe---cCCCcEEEEeecc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 547 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~ 547 (580)
||||+.+++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 9999999999988743 3468999999999999999999998 899999999999999 4678999999999
Q ss_pred ccccCCCCCCccccccccCCccCccccCC
Q 008026 548 VRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 548 a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
++...... ......||+.|+|||++.+
T Consensus 176 a~~~~~~~--~~~~~~gt~~y~aPE~~~~ 202 (484)
T 3nyv_A 176 STHFEASK--KMKDKIGTAYYIAPEVLHG 202 (484)
T ss_dssp HHHBCCCC--SHHHHTTGGGTCCHHHHHT
T ss_pred eEEccccc--ccccCCCCccccCceeecC
Confidence 98765443 2344579999999999865
No 146
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.96 E-value=1.5e-28 Score=249.51 Aligned_cols=168 Identities=30% Similarity=0.451 Sum_probs=145.0
Q ss_pred cCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
+.|++.+.||+|+||.||+|+. .+++.||||++..... .....+++.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4589999999999999999976 4789999999976432 2334567899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+. |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 134 e~~~-g~l~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp ECCS-EEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred ecCC-CCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 9997 588777643 22468999999999999999999998 799999999999999999999999999998654
Q ss_pred CCCCCccccccccCCccCccccC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
.. ....||+.|+|||++.
T Consensus 206 ~~-----~~~~gt~~y~aPE~~~ 223 (348)
T 1u5q_A 206 PA-----NSFVGTPYWMAPEVIL 223 (348)
T ss_dssp SB-----CCCCSCGGGCCHHHHH
T ss_pred CC-----CcccCCcceeCHhhhc
Confidence 32 2357999999999984
No 147
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.96 E-value=1e-28 Score=244.32 Aligned_cols=169 Identities=24% Similarity=0.403 Sum_probs=145.0
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CC-------cEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DG-------TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 465 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 465 (580)
.++|++.+.||+|+||.||+|... ++ ..||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 357999999999999999999765 33 47999998653 234557899999999999999999999999999
Q ss_pred CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc------
Q 008026 466 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR------ 539 (580)
Q Consensus 466 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~------ 539 (580)
+..++||||+++++|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CCCEEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccc
Confidence 9999999999999999998542 2348889999999999999999998 89999999999999998876
Q ss_pred --EEEEeeccccccCCCCCCccccccccCCccCccccCC
Q 008026 540 --AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 540 --~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+||+|||+++.... .....||+.|+|||++.+
T Consensus 158 ~~~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~ 191 (289)
T 4fvq_A 158 PFIKLSDPGISITVLP-----KDILQERIPWVPPECIEN 191 (289)
T ss_dssp CEEEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHC
T ss_pred ceeeeccCcccccccC-----ccccCCcCcccCHHHhCC
Confidence 99999999875532 223468999999999876
No 148
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.96 E-value=6.4e-29 Score=250.42 Aligned_cols=177 Identities=29% Similarity=0.450 Sum_probs=140.0
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcE----EEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
++|++.+.||+|+||.||+|++. +++. ||+|.+... ......+++.+|+.++++++||||+++++++.... .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 57999999999999999999764 4443 577777543 23345678999999999999999999999998754 78
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+|+||+.+|+|.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+
T Consensus 93 ~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHHH----STTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCccee
Confidence 99999999999998854 23468999999999999999999998 799999999999999999999999999998
Q ss_pred ccCCCCCC-ccccccccCCccCccccCCCCCC
Q 008026 550 LAPEGKGS-IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 550 ~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
........ ......||+.|+|||++.+..++
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 197 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCC
Confidence 76543322 22234578899999998876653
No 149
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.96 E-value=5.1e-29 Score=250.62 Aligned_cols=184 Identities=27% Similarity=0.441 Sum_probs=152.4
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 465 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 465 (580)
...++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 34568999999999999999999654 36789999987532 334556789999999999999999999999999
Q ss_pred CeeEEEEEecCCCChhHHHHHHhhh-----CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcE
Q 008026 466 NEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 540 (580)
Q Consensus 466 ~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 540 (580)
+..++||||+++++|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeE
Confidence 9999999999999999998764321 12456889999999999999999998 899999999999999999999
Q ss_pred EEEeeccccccCCCCC-CccccccccCCccCccccCCCCC
Q 008026 541 KVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 541 kl~Dfg~a~~~~~~~~-~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
||+|||+++....... .......||+.|+|||++.+..+
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 217 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF 217 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCC
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCC
Confidence 9999999976543221 11223457899999999876654
No 150
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.5e-28 Score=249.77 Aligned_cols=177 Identities=29% Similarity=0.377 Sum_probs=141.6
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh---hhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG---KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
...++|++.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999875 68999999987533221 123467899999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 547 (580)
.++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred eEEEEEcCCC-CHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 9999999976 88777632 33468889999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCccCccccCCC
Q 008026 548 VRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 548 a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
++...... .......||+.|+|||++.+.
T Consensus 159 a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~ 187 (346)
T 1ua2_A 159 AKSFGSPN-RAYTHQVVTRWYRAPELLFGA 187 (346)
T ss_dssp GSTTTSCC-CCCCCSCCCCTTCCHHHHTTC
T ss_pred ceeccCCc-ccCCcccccccccCchHhhCC
Confidence 98764432 223345789999999998754
No 151
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=3.3e-28 Score=242.44 Aligned_cols=174 Identities=26% Similarity=0.447 Sum_probs=151.6
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
+.|++.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++......++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 56899999999999999999764 689999999976432 3456789999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 101 YLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp CCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred eCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999988732 468999999999999999999998 8999999999999999999999999999987654
Q ss_pred CCCCccccccccCCccCccccCCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
... ......||+.|+|||++.+..+
T Consensus 172 ~~~-~~~~~~~~~~y~aPE~~~~~~~ 196 (303)
T 3a7i_A 172 TQI-KRNTFVGTPFWMAPEVIKQSAY 196 (303)
T ss_dssp TBC-CBCCCCSCGGGCCHHHHTTCCB
T ss_pred ccc-ccCccCCCcCccCHHHHhcCCC
Confidence 321 2234578999999999987664
No 152
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.96 E-value=1.2e-28 Score=243.82 Aligned_cols=172 Identities=32% Similarity=0.553 Sum_probs=136.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.++|++.+.||+|+||.||+|+.. ..||+|++..........+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467999999999999999999764 4699999987655666678899999999999999999999965 4566899999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999888743 23468899999999999999999998 8999999999999999999999999999976543
Q ss_pred CC-CCccccccccCCccCccccC
Q 008026 554 GK-GSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 554 ~~-~~~~~~~~Gt~~y~APE~~~ 575 (580)
.. ........||+.|+|||++.
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~ 195 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIR 195 (289)
T ss_dssp -----------CCCTTCCHHHHC
T ss_pred ccccccccccCCCccccCchhhc
Confidence 22 12223457999999999986
No 153
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.96 E-value=1.6e-28 Score=242.47 Aligned_cols=175 Identities=27% Similarity=0.473 Sum_probs=150.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|... ++..||+|++...... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367999999999999999999775 6789999998754322 22346789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999988542 358899999999999999999997 89999999999999999999999999998765
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... .....||+.|+|||++.+..+
T Consensus 165 ~~~~---~~~~~~~~~y~aPE~~~~~~~ 189 (284)
T 2vgo_A 165 PSLR---RRTMCGTLDYLPPEMIEGKTH 189 (284)
T ss_dssp SSSC---BCCCCSCGGGCCHHHHTTCCB
T ss_pred cccc---cccccCCCCcCCHHHhccCCC
Confidence 4322 234578999999999987654
No 154
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.96 E-value=1.2e-28 Score=249.20 Aligned_cols=181 Identities=27% Similarity=0.435 Sum_probs=148.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc--------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEc
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 464 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 464 (580)
.++|++.+.||+|+||.||+|+.. ++..||+|++.... .....+.+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 367999999999999999999763 46789999997642 445567899999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhh-----------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeE
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 533 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIl 533 (580)
.+..++||||+++++|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence 99999999999999999998653211 11348899999999999999999998 89999999999999
Q ss_pred ecCCCcEEEEeeccccccCCCCCC-ccccccccCCccCccccCCCC
Q 008026 534 LGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 534 l~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~ 578 (580)
++.++.+||+|||+++........ ......||+.|+|||++.+..
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 235 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCE
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCC
Confidence 999999999999999876543211 122245788999999886544
No 155
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.96 E-value=3.2e-28 Score=240.96 Aligned_cols=170 Identities=26% Similarity=0.410 Sum_probs=146.7
Q ss_pred CCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc----CCeeEE
Q 008026 396 NFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEKLL 470 (580)
Q Consensus 396 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~l 470 (580)
.|++.+.||+|+||.||+|... ++..||+|++..........+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4788899999999999999765 68899999998766666677889999999999999999999998875 355799
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeEec-CCCcEEEEeecc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFGL 547 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~ 547 (580)
||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++ +++.+||+|||+
T Consensus 107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999998542 468899999999999999999997 66 99999999999998 789999999999
Q ss_pred ccccCCCCCCccccccccCCccCccccCC
Q 008026 548 VRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 548 a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+...... ......||+.|+|||++.+
T Consensus 179 ~~~~~~~---~~~~~~~t~~y~aPE~~~~ 204 (290)
T 1t4h_A 179 ATLKRAS---FAKAVIGTPEFMAPEMYEE 204 (290)
T ss_dssp GGGCCTT---SBEESCSSCCCCCGGGGGT
T ss_pred ccccccc---ccccccCCcCcCCHHHHhc
Confidence 9765433 2234579999999998864
No 156
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.96 E-value=1.6e-28 Score=250.09 Aligned_cols=175 Identities=26% Similarity=0.384 Sum_probs=146.4
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc--------C
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD--------G 465 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--------~ 465 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++............+.+|+++++.++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57999999999999999999874 78999999997655444455678899999999999999999999887 3
Q ss_pred CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEee
Q 008026 466 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 545 (580)
Q Consensus 466 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 545 (580)
+..++||||+++ +|.+.+.. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ceEEEEEeccCC-CHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccc
Confidence 468999999975 77766632 23468999999999999999999998 89999999999999999999999999
Q ss_pred ccccccCCCCC---CccccccccCCccCccccCCC
Q 008026 546 GLVRLAPEGKG---SIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 546 g~a~~~~~~~~---~~~~~~~Gt~~y~APE~~~~~ 577 (580)
|+|+....... .......||+.|+|||++.+.
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 203 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE 203 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCC
Confidence 99987643221 122345789999999998763
No 157
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.96 E-value=3.2e-28 Score=241.82 Aligned_cols=176 Identities=19% Similarity=0.289 Sum_probs=149.1
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 470 (580)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+|+++++++ +|++++++++++......++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 346799999999999999999976 478999999986532 234578899999999 69999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc-----EEEEee
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-----AKVADF 545 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Df 545 (580)
||||+ +++|.+++.. ....+++.++..++.||+.||+|||+ .+|+||||||+||+++.++. +||+||
T Consensus 84 v~e~~-~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Df 155 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDL----CGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDF 155 (298)
T ss_dssp EEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred EEEec-CCCHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEEC
Confidence 99999 9999999854 22458999999999999999999997 89999999999999987765 999999
Q ss_pred ccccccCCCCCC------ccccccccCCccCccccCCCCCC
Q 008026 546 GLVRLAPEGKGS------IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 546 g~a~~~~~~~~~------~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|+++........ ......||+.|+|||++.+..++
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 196 (298)
T 1csn_A 156 GMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQS 196 (298)
T ss_dssp TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC
T ss_pred ccccccccccccccccccCccCCCCCcccCCchhhcCCCCC
Confidence 999876543221 12345799999999999887653
No 158
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.96 E-value=1.1e-28 Score=241.69 Aligned_cols=173 Identities=32% Similarity=0.515 Sum_probs=136.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccC--hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS--GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|.+. ++.||+|++...... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357999999999999999999875 899999998754322 23357789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCC---cEecCCCCCCeEecC--------CCcE
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS---FIHRDLKPSNILLGD--------DMRA 540 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~---ivH~Dlkp~NIll~~--------~~~~ 540 (580)
|||+++++|.+++. ...+++..+..++.|++.||+|||+ .+ |+||||||+||+++. ++.+
T Consensus 85 ~e~~~~~~L~~~~~------~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 85 MEFARGGPLNRVLS------GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp EECCTTEEHHHHHT------SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred EEcCCCCCHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcce
Confidence 99999999988873 2468999999999999999999998 56 999999999999985 6789
Q ss_pred EEEeeccccccCCCCCCccccccccCCccCccccCCCCC
Q 008026 541 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 541 kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
||+|||+++...... .....||+.|+|||++.+..+
T Consensus 156 kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~ 191 (271)
T 3dtc_A 156 KITDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMF 191 (271)
T ss_dssp EECCCCC----------------CCGGGSCHHHHHHCCC
T ss_pred EEccCCccccccccc---ccCCCCccceeCHHHhccCCC
Confidence 999999998654432 223568999999999877654
No 159
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96 E-value=7.2e-29 Score=253.61 Aligned_cols=176 Identities=25% Similarity=0.363 Sum_probs=150.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|... ++..||+|++... ......+.+.+|++++++++||||+++++++...+..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 367999999999999999999876 7899999999764 24445678999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++++|.+++... ..+++..+..++.|++.||+|||+ ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred ECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999998542 358899999999999999999997 1389999999999999999999999999987553
Q ss_pred CCCCCccccccccCCccCccccCCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
... .....||+.|+|||++.+..++
T Consensus 184 ~~~---~~~~~gt~~y~aPE~~~~~~~~ 208 (360)
T 3eqc_A 184 DSM---ANSFVGTRSYMSPERLQGTHYS 208 (360)
T ss_dssp HHC-------CCCCTTCCHHHHTTCCCS
T ss_pred ccc---ccCCCCCCCeECHHHHcCCCCC
Confidence 221 2335799999999999887653
No 160
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.96 E-value=1.9e-28 Score=246.05 Aligned_cols=172 Identities=31% Similarity=0.533 Sum_probs=145.4
Q ss_pred CcccceeeccCcEEEEEEEEc-----CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC--CeeE
Q 008026 397 FSEENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--NEKL 469 (580)
Q Consensus 397 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 469 (580)
|++.+.||+|+||.||++.+. +++.||+|++... ......+.+.+|++++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488999999999999988653 6889999999764 3345567899999999999999999999999874 5789
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++++|.+++.. ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 112 lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccc
Confidence 99999999999998843 348899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCC--ccccccccCCccCccccCCCC
Q 008026 550 LAPEGKGS--IETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 550 ~~~~~~~~--~~~~~~Gt~~y~APE~~~~~~ 578 (580)
........ ......||+.|+|||++.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 213 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYK 213 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCE
T ss_pred cccccccccccccCCCCCceeeChHHhcCCC
Confidence 77544321 123346788999999987654
No 161
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.95 E-value=2.8e-28 Score=239.54 Aligned_cols=176 Identities=32% Similarity=0.461 Sum_probs=144.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 468999999999999999999876 789999999976432 223456789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9999999999988542 358899999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
.... ......||+.|+|||++.+..+
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~ 187 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLY 187 (276)
T ss_dssp CC---------------CCTGGGTTSCC
T ss_pred CCCc--ceecccCCccccCHHHHcCCCC
Confidence 4432 2234568999999999987653
No 162
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.95 E-value=2.2e-28 Score=243.21 Aligned_cols=176 Identities=27% Similarity=0.408 Sum_probs=146.3
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++............+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57999999999999999999876 78999999987654444445778899999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|++ ++|.+++.. .....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.++....
T Consensus 83 ~~~-~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 83 FLH-QDLKKFMDA---SALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp CCS-EEHHHHHHH---TTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred ccc-CCHHHHHHh---hhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 997 599888754 222458889999999999999999998 8999999999999999999999999999987643
Q ss_pred CCCCccccccccCCccCccccCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
... ......||+.|+|||++.+..
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~ 179 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAK 179 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCS
T ss_pred Ccc-ccCcccccccccCcHHhhccc
Confidence 322 223356899999999987654
No 163
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.95 E-value=1e-28 Score=252.50 Aligned_cols=169 Identities=28% Similarity=0.424 Sum_probs=130.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC------C
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG------N 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 466 (580)
.++|++.+.||+|+||.||+|... +++.||||++..........+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 478999999999999999999764 789999999976544555667889999999999999999999998754 5
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..++|+||+ +++|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 679999999 6899888732 468999999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+++..... .....||+.|+|||++.+
T Consensus 178 ~a~~~~~~----~~~~~~t~~y~aPE~~~~ 203 (367)
T 2fst_X 178 LARHTADE----MTGYVATRWYRAPEIMLN 203 (367)
T ss_dssp -----------------CCCTTCCHHHHTT
T ss_pred cccccccc----CCCcCcCcCccChHHHcC
Confidence 99865432 234579999999999876
No 164
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.95 E-value=7.7e-29 Score=249.63 Aligned_cols=177 Identities=27% Similarity=0.464 Sum_probs=142.7
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcE----EEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
++|++.+.||+|+||.||+|.+. +++. ||+|.+.... .......+.+|+.++++++||||+++++++. ....+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 57999999999999999999764 4443 7777775432 2233456788999999999999999999886 45689
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+.+|+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 91 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCccc
Confidence 999999999999988532 2367889999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCC-ccccccccCCccCccccCCCCCC
Q 008026 550 LAPEGKGS-IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 550 ~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
........ ......||+.|+|||++.+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 195 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 195 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCC
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCC
Confidence 76544322 23345688899999998776653
No 165
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.95 E-value=1.5e-28 Score=242.35 Aligned_cols=173 Identities=31% Similarity=0.516 Sum_probs=147.6
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc-------
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------- 464 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 464 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 4467999999999999999999876 78999999987532 356789999999999999999998864
Q ss_pred ---------CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec
Q 008026 465 ---------GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG 535 (580)
Q Consensus 465 ---------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~ 535 (580)
....++||||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLV 156 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEc
Confidence 345799999999999999986532 2468899999999999999999998 8999999999999999
Q ss_pred CCCcEEEEeeccccccCCCCCCccccccccCCccCccccCCCCC
Q 008026 536 DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 536 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
+++.+||+|||+++....... .....||+.|+|||++.+..+
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~ 198 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDY 198 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCC
T ss_pred CCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCC
Confidence 999999999999987654332 233568999999999877654
No 166
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.95 E-value=2.7e-28 Score=243.20 Aligned_cols=175 Identities=29% Similarity=0.459 Sum_probs=148.4
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
+.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 4567999999999999999999875 78999999997532 22345788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe---cCCCcEEEEeeccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 548 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a 548 (580)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 85 MQLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp ECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 9999999999888441 358899999999999999999998 899999999999999 77889999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+..... ......||+.|+|||++.+..++
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~ 185 (304)
T 2jam_A 157 KMEQNG---IMSTACGTPGYVAPEVLAQKPYS 185 (304)
T ss_dssp CCCCCB---TTHHHHSCCCBCCTTTBSSCSCC
T ss_pred eecCCC---ccccccCCCCccChHHhccCCCC
Confidence 765332 22345699999999999887653
No 167
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.95 E-value=6.5e-29 Score=250.04 Aligned_cols=173 Identities=25% Similarity=0.377 Sum_probs=138.7
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++..... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57999999999999999999876 789999999865321 1122245579999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|++ ++|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 81 YLD-KDLKQYLDD----CGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp CCS-EEHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ccc-cCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 997 588887743 23468899999999999999999998 8999999999999999999999999999986543
Q ss_pred CCCCccccccccCCccCccccCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
... ......||+.|+|||++.+.
T Consensus 153 ~~~-~~~~~~~t~~y~aPE~~~~~ 175 (324)
T 3mtl_A 153 PTK-TYDNEVVTLWYRPPDILLGS 175 (324)
T ss_dssp -----------CGGGCCHHHHTTC
T ss_pred Ccc-ccccccCcccccChhhhcCC
Confidence 322 22345789999999998763
No 168
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.95 E-value=2.4e-28 Score=241.76 Aligned_cols=174 Identities=26% Similarity=0.345 Sum_probs=135.0
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467999999999999999999874 7899999999765433333444555556678889999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCC-CcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
||++ ++|.+++..... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9997 488888765433 33578999999999999999999998 6 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCcccc
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYA 574 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~ 574 (580)
..... .....||+.|+|||++
T Consensus 161 ~~~~~--~~~~~~t~~y~aPE~~ 181 (290)
T 3fme_A 161 VDDVA--KDIDAGCKPYMAPERI 181 (290)
T ss_dssp -----------CCCCCCSCHHHH
T ss_pred ccccc--ccccCCCccccChhhc
Confidence 54322 2334699999999996
No 169
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.95 E-value=2.6e-28 Score=249.69 Aligned_cols=181 Identities=24% Similarity=0.336 Sum_probs=144.3
Q ss_pred eHHHHHHhhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccC---------hhhHHHHHHHHHHHHhcCCCccc
Q 008026 386 SIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS---------GKGLTEFKSEIAVLTKVRHRHLV 456 (580)
Q Consensus 386 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~E~~~l~~l~h~niv 456 (580)
..+++....++|++.+.||+|+||.||+|...++..||||++...... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456778889999999999999999999998888999999998653221 12247889999999999999999
Q ss_pred ceeeEEEc-----CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCC
Q 008026 457 ALLGHCLD-----GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSN 531 (580)
Q Consensus 457 ~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~N 531 (580)
++++++.. ....++||||++ ++|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||||+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 164 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGN 164 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHH
Confidence 99999854 335799999997 588777742 23468999999999999999999998 899999999999
Q ss_pred eEecCCCcEEEEeeccccccCCCCCCccccccccCCccCccccCC
Q 008026 532 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 532 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
|+++.++.+||+|||+++...... ......||+.|+|||++.+
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~ 207 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQ 207 (362)
T ss_dssp EEECTTCCEEECCTTC-----------------CGGGCCHHHHTT
T ss_pred EEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcC
Confidence 999999999999999997554332 2234578999999999876
No 170
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.95 E-value=4e-28 Score=248.28 Aligned_cols=179 Identities=28% Similarity=0.455 Sum_probs=153.1
Q ss_pred HHHHHHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC------hhhHHHHHHHHHHHHhc-CCCcccce
Q 008026 387 IQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS------GKGLTEFKSEIAVLTKV-RHRHLVAL 458 (580)
Q Consensus 387 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l-~h~niv~~ 458 (580)
......+.++|++.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 4455666788999999999999999999875 7999999998764311 11245678999999999 79999999
Q ss_pred eeEEEcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC
Q 008026 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 538 (580)
Q Consensus 459 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 538 (580)
++++......++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNM 237 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCC
Confidence 9999999999999999999999998853 1368899999999999999999998 8999999999999999999
Q ss_pred cEEEEeeccccccCCCCCCccccccccCCccCccccC
Q 008026 539 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 539 ~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
.+||+|||++....... ......||+.|+|||++.
T Consensus 238 ~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~ 272 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILK 272 (365)
T ss_dssp CEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHH
T ss_pred CEEEEecCcccccCCCc--ccccCCCCCCccChhhcc
Confidence 99999999998765432 233467999999999985
No 171
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.95 E-value=2.2e-28 Score=244.98 Aligned_cols=184 Identities=31% Similarity=0.468 Sum_probs=141.9
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc----CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe-
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE- 467 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~- 467 (580)
..++|.+.+.||+|+||.||+|... ++..||+|++..........+.+.+|+.++++++||||+++++++.....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3467999999999999999999764 34589999998765555667789999999999999999999999987653
Q ss_pred ----eEEEEEecCCCChhHHHHHHhh-hCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEE
Q 008026 468 ----KLLVFEYMPQGTLSRHIFNWAE-EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 542 (580)
Q Consensus 468 ----~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 542 (580)
.++||||+++++|.+++..... .....+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEE
Confidence 4999999999999998854321 234578999999999999999999997 89999999999999999999999
Q ss_pred EeeccccccCCCCC-CccccccccCCccCccccCCCCC
Q 008026 543 ADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~-~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
+|||+++....... .......|++.|+|||.+.+..+
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 226 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY 226 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCC
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCc
Confidence 99999986644321 11223457889999999877665
No 172
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.95 E-value=3.5e-28 Score=241.95 Aligned_cols=175 Identities=27% Similarity=0.440 Sum_probs=142.1
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc-------
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------- 464 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 464 (580)
+.++|++.+.||+|+||.||+|+.. +++.||+|++.. .....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 3567999999999999999999875 789999999865 23455788999999999999999999998865
Q ss_pred ------CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC
Q 008026 465 ------GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 538 (580)
Q Consensus 465 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 538 (580)
....++||||+++++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCC
Confidence 3467899999999999999853 22357788899999999999999998 8999999999999999999
Q ss_pred cEEEEeeccccccCCCC-------------CCccccccccCCccCccccCCC
Q 008026 539 RAKVADFGLVRLAPEGK-------------GSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 539 ~~kl~Dfg~a~~~~~~~-------------~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
.+||+|||+++...... ........||+.|+|||++.+.
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 205 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT 205 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSC
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC
Confidence 99999999997654321 1112345689999999998764
No 173
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3e-28 Score=246.16 Aligned_cols=178 Identities=25% Similarity=0.452 Sum_probs=143.0
Q ss_pred cCCcccceeeccCcEEEEEEEEcC-----CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHD-----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
++|++.+.||+|+||.||+|.... +..||+|++.... .......+.+|++++++++||||+++++++...+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 578889999999999999997652 2469999987542 4445667899999999999999999999999999999
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++++|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 123 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 123 IITEYMENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEECCTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred EEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 99999999999998853 23468999999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCCc--cccccccCCccCccccCCCCCC
Q 008026 550 LAPEGKGSI--ETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 550 ~~~~~~~~~--~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
......... .....||+.|+|||++.+..++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 228 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCC
Confidence 764432111 1223467889999998776653
No 174
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.95 E-value=7.4e-29 Score=266.23 Aligned_cols=176 Identities=31% Similarity=0.493 Sum_probs=148.3
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.++|++.+.||+|+||.||+|.+.++..||||+++.... ..+++.+|++++++++||||+++++++.. +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 467899999999999999999998888899999976432 34679999999999999999999999876 67899999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|+++|+|.+++..... ..+++.+++.++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++....
T Consensus 342 ~~~~gsL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp CCTTEEHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred hhcCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999864322 357889999999999999999998 8999999999999999999999999999986643
Q ss_pred CCCCccccccccCCccCccccCCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..........++..|+|||++.+..+
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~ 441 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRF 441 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCC
T ss_pred CceecccCCcCcccccCHHHhccCCC
Confidence 21111122346788999999876654
No 175
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=2.2e-28 Score=253.14 Aligned_cols=175 Identities=25% Similarity=0.383 Sum_probs=147.3
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC--eeEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN--EKLL 470 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 470 (580)
.++|++.+.||+|+||.||+|++. +++.||||++..... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 357999999999999999999876 589999999975432 234567889999999999999999999998765 6799
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe----cCCCcEEEEeec
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMRAKVADFG 546 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg 546 (580)
||||+++++|.+++..... ...+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||
T Consensus 87 v~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EECCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 9999999999999854322 2348999999999999999999998 899999999999999 777789999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+++...... ......||+.|+|||++.+
T Consensus 162 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~ 189 (396)
T 4eut_A 162 AARELEDDE--QFVSLYGTEEYLHPDMYER 189 (396)
T ss_dssp GCEECCCGG--GSSCSSSCCTTCCHHHHHH
T ss_pred CceEccCCC--ccccccCCccccCHHHhhc
Confidence 998765432 2234579999999998753
No 176
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.95 E-value=2e-28 Score=247.57 Aligned_cols=182 Identities=27% Similarity=0.420 Sum_probs=150.9
Q ss_pred hcCCcccceeeccCcEEEEEEEEcC-C-----cEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCC
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHD-G-----TKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGN 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 466 (580)
.++|++.+.||+|+||.||+|.... + ..||+|.+.... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 4689999999999999999997642 2 479999987632 334567899999999999 8999999999999999
Q ss_pred eeEEEEEecCCCChhHHHHHHhhh---------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEE---------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 537 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~---------~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~ 537 (580)
..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCC
Confidence 999999999999999998654321 12457899999999999999999998 899999999999999999
Q ss_pred CcEEEEeeccccccCCCCCC-ccccccccCCccCccccCCCCC
Q 008026 538 MRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 538 ~~~kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
+.+||+|||+++........ ......||+.|+|||++.+..+
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 243 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCC
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCC
Confidence 99999999999865433221 2233457889999999876554
No 177
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.95 E-value=2.2e-28 Score=240.94 Aligned_cols=177 Identities=24% Similarity=0.378 Sum_probs=144.1
Q ss_pred hcCCcccceeeccCcEEEEEEEEcC----CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
.++|++.+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|++++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 3579999999999999999997642 3469999987642 34456789999999999999999999999865 4578
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp EEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred EEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCc
Confidence 999999999999998542 2458899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCccCccccCCCCC
Q 008026 550 LAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 550 ~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
..............||+.|+|||++.+..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 191 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRF 191 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCC
T ss_pred ccccccccccccCCCCcceeCchhhccCCC
Confidence 765433222333457889999999876654
No 178
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.95 E-value=9.8e-29 Score=252.94 Aligned_cols=179 Identities=18% Similarity=0.263 Sum_probs=141.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEcC------CcEEEEEEeeccccChh---------hHHHHHHHHHHHHhcCCCcccce
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGK---------GLTEFKSEIAVLTKVRHRHLVAL 458 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~ 458 (580)
.++|++.+.||+|+||.||+|.+.. ++.||+|++........ ....+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998754 47899999875421100 01223456667778889999999
Q ss_pred eeEEEcC----CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe
Q 008026 459 LGHCLDG----NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL 534 (580)
Q Consensus 459 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll 534 (580)
++++... ...++||||+ +++|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill 185 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEE
Confidence 9998764 4579999999 9999998854 23568999999999999999999998 899999999999999
Q ss_pred c--CCCcEEEEeeccccccCCCCC------CccccccccCCccCccccCCCCCC
Q 008026 535 G--DDMRAKVADFGLVRLAPEGKG------SIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 535 ~--~~~~~kl~Dfg~a~~~~~~~~------~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+ .++.+||+|||+++....... .......||+.|+|||++.+..++
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 239 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPS 239 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCC
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCC
Confidence 9 889999999999976543211 111335699999999999887653
No 179
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95 E-value=5.2e-28 Score=239.05 Aligned_cols=169 Identities=35% Similarity=0.667 Sum_probs=142.2
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhh-----HHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKG-----LTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
++|++.+.||+|+||.||+|+.. +++.||+|++......... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 57999999999999999999874 7899999998654332211 267899999999999999999999986654
Q ss_pred EEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeEecCCCc-----EE
Q 008026 469 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMR-----AK 541 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~k 541 (580)
++||||+++++|.+++.. ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++. +|
T Consensus 97 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp EEEEECCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred eEEEEecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 799999999999888743 23468999999999999999999997 67 999999999999987776 99
Q ss_pred EEeeccccccCCCCCCccccccccCCccCccccCC
Q 008026 542 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 542 l~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
|+|||+++.... ......||+.|+|||++.+
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~ 200 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGA 200 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSC
T ss_pred eCCCCccccccc----cccccCCCccccCchhhcc
Confidence 999999975433 2334579999999999843
No 180
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.95 E-value=2.1e-28 Score=245.32 Aligned_cols=188 Identities=26% Similarity=0.380 Sum_probs=152.6
Q ss_pred HHHHHhhcCCcccceeeccCcEEEEEEEE------cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceee
Q 008026 388 QVLRNVTNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLG 460 (580)
Q Consensus 388 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~ 460 (580)
.......++|++.+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+++++++ +||||+++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 34444567899999999999999999974 246889999997642 344556889999999999 6999999999
Q ss_pred EEEcCC-eeEEEEEecCCCChhHHHHHHhhhC-----------CCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCC
Q 008026 461 HCLDGN-EKLLVFEYMPQGTLSRHIFNWAEEG-----------LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 528 (580)
Q Consensus 461 ~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~-----------~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlk 528 (580)
++...+ ..++||||+++++|.+++....... ...+++..++.++.|++.||+|||+ .+|+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCc
Confidence 988755 4899999999999999985422110 1238899999999999999999998 899999999
Q ss_pred CCCeEecCCCcEEEEeeccccccCCCCCC-ccccccccCCccCccccCCCCC
Q 008026 529 PSNILLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 529 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
|+||+++.++.+||+|||+++........ ......||+.|+|||++.+..+
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 227 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 227 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccc
Confidence 99999999999999999999866443322 2233568999999999876654
No 181
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=5e-28 Score=249.43 Aligned_cols=174 Identities=22% Similarity=0.335 Sum_probs=142.4
Q ss_pred HhhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC-----
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG----- 465 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 465 (580)
...++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 3457899999999999999999976 4789999999875321 224799999999999999999998543
Q ss_pred ---------------------------------CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHH
Q 008026 466 ---------------------------------NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 512 (580)
Q Consensus 466 ---------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~ 512 (580)
...++||||++ ++|.+.+...... ...+++..+..++.||+.||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHH
Confidence 34789999997 5888888654433 357899999999999999999
Q ss_pred HHHhCCCCCcEecCCCCCCeEec-CCCcEEEEeeccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 513 YLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 513 ~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
|||+ .+|+||||||+||+++ .++.+||+|||+|+....... .....||+.|+|||++.+..
T Consensus 156 ~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~ 217 (383)
T 3eb0_A 156 FIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGAT 217 (383)
T ss_dssp HHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCS
T ss_pred HHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCC
Confidence 9997 8999999999999998 688999999999987654332 23457899999999987643
No 182
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.2e-28 Score=244.18 Aligned_cols=173 Identities=32% Similarity=0.517 Sum_probs=138.5
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEe
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 474 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 474 (580)
++|++.+.||+|+||.||+|+.. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 57899999999999999999875 788999998642 345788999999999999999999998863 47999999
Q ss_pred cCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc-EEEEeeccccccCC
Q 008026 475 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-AKVADFGLVRLAPE 553 (580)
Q Consensus 475 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~ 553 (580)
+++++|.+++... .....+++..++.++.|++.||+|||+...++|+||||||+||+++.++. +||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 81 AEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CTTCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 9999999998532 11224678899999999999999999743368999999999999998876 79999999976543
Q ss_pred CCCCccccccccCCccCccccCCCCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
. .....||+.|+|||++.+..++
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~ 181 (307)
T 2eva_A 159 H----MTNNKGSAAWMAPEVFEGSNYS 181 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCC
T ss_pred c----cccCCCCCceEChhhhCCCCCC
Confidence 2 2234689999999999887653
No 183
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.95 E-value=2.7e-28 Score=245.95 Aligned_cols=175 Identities=28% Similarity=0.462 Sum_probs=147.6
Q ss_pred cCCcccceeeccCcEEEEEEEE-----cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEE--cCCe
Q 008026 395 NNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL--DGNE 467 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~ 467 (580)
++|++.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++. ....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5799999999999999999984 36889999998753 3445577999999999999999999999887 4566
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 547 (580)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccc
Confidence 899999999999999985422 258899999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCC--ccccccccCCccCccccCCCC
Q 008026 548 VRLAPEGKGS--IETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 548 a~~~~~~~~~--~~~~~~Gt~~y~APE~~~~~~ 578 (580)
++........ ......||+.|+|||++.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 206 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 206 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCE
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCC
Confidence 9876543321 122345888999999986554
No 184
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.95 E-value=2.7e-29 Score=250.17 Aligned_cols=172 Identities=26% Similarity=0.415 Sum_probs=132.3
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHh--cCCCcccceeeEEEcCC----e
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCLDGN----E 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~ 467 (580)
.++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++.... .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 367999999999999999999775 899999998642 34567778888887 78999999999998876 7
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCC-----CCCcEecCCCCCCeEecCCCcEEE
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGDDMRAKV 542 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl 542 (580)
.++||||+++|+|.+++.. ..+++..++.++.|++.||+|||... ..+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-B
T ss_pred eEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEE
Confidence 8999999999999999843 35778889999999999999999210 289999999999999999999999
Q ss_pred EeeccccccCCCCCCc---cccccccCCccCccccCCC
Q 008026 543 ADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~~~---~~~~~Gt~~y~APE~~~~~ 577 (580)
+|||+++......... .....||+.|+|||++.+.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 187 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCc
Confidence 9999997654433221 2234799999999998765
No 185
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.95 E-value=4.6e-29 Score=256.59 Aligned_cols=175 Identities=17% Similarity=0.216 Sum_probs=140.5
Q ss_pred hcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeecccc-ChhhHHHHHHHH---HHHHhcCCCccccee-------eE
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVI-SGKGLTEFKSEI---AVLTKVRHRHLVALL-------GH 461 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~---~~l~~l~h~niv~~~-------~~ 461 (580)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999986 4699999999975432 344567889999 555566899999998 66
Q ss_pred EEcCC-----------------eeEEEEEecCCCChhHHHHHHhhhC--CCCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 008026 462 CLDGN-----------------EKLLVFEYMPQGTLSRHIFNWAEEG--LKPLEWNRRLTIALDVARGVEYLHGLAHQSF 522 (580)
Q Consensus 462 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~i 522 (580)
+...+ ..|+||||+ +|+|.+++....... ...+++..++.|+.||+.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 65553 278999999 679999986542211 1235568888999999999999998 899
Q ss_pred EecCCCCCCeEecCCCcEEEEeeccccccCCCCCCccccccccCCccCccccCCC
Q 008026 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 523 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
+||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++.+.
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~ 277 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARR 277 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhccc
Confidence 9999999999999999999999999986432 2344578 999999998765
No 186
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.95 E-value=3.3e-28 Score=241.85 Aligned_cols=177 Identities=30% Similarity=0.451 Sum_probs=144.3
Q ss_pred cCCcccceeeccCcEEEEEEEEcC----CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEE-cCCeeE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL-DGNEKL 469 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~ 469 (580)
.+|++.+.||+|+||.||+|...+ ...||+|.+... ......+.+.+|++++++++||||+++++++. .++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 468889999999999999997642 236899988752 34445678999999999999999999999865 456789
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp EEEECCTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred EEEeCCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccc
Confidence 99999999999998843 23467889999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCC---CccccccccCCccCccccCCCCC
Q 008026 550 LAPEGKG---SIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 550 ~~~~~~~---~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
....... .......||+.|+|||.+.+..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 209 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCC
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCC
Confidence 6543221 11233467889999999876655
No 187
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.95 E-value=7.7e-28 Score=244.08 Aligned_cols=179 Identities=25% Similarity=0.412 Sum_probs=149.3
Q ss_pred HHHHHHhhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHh--cCCCcccceeeEEEc
Q 008026 387 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCLD 464 (580)
Q Consensus 387 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~ 464 (580)
......+.++|++.+.||+|+||.||+|+. +++.||+|++... ....+.+|++++.. ++||||+++++++..
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 334455677899999999999999999987 4899999998642 34567889999888 689999999999988
Q ss_pred CC----eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhC-----CCCCcEecCCCCCCeEec
Q 008026 465 GN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL-----AHQSFIHRDLKPSNILLG 535 (580)
Q Consensus 465 ~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~-----~~~~ivH~Dlkp~NIll~ 535 (580)
.. ..++||||+++++|.+++.. ..+++.+++.++.|++.||+|||.. +..+|+||||||+||+++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC
T ss_pred cCCccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC
Confidence 76 78999999999999999843 3588999999999999999999921 017999999999999999
Q ss_pred CCCcEEEEeeccccccCCCCCC---ccccccccCCccCccccCCC
Q 008026 536 DDMRAKVADFGLVRLAPEGKGS---IETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 536 ~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~Gt~~y~APE~~~~~ 577 (580)
.++.+||+|||+++........ ......||+.|+|||++.+.
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 226 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhccc
Confidence 9999999999999876543321 12335799999999998765
No 188
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.95 E-value=6.2e-28 Score=241.77 Aligned_cols=176 Identities=31% Similarity=0.459 Sum_probs=146.2
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
...++|++.+.||+|+||.||+|... +++.||+|++.... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34568999999999999999999775 68999999997532 34678999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||.+..
T Consensus 102 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 102 VMEYCGAGSVSDIIRL----RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEECCTTEEHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EeecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 9999999999998843 23468999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCccCccccCCCCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
...... ......||+.|+|||++.+..+
T Consensus 175 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~ 202 (314)
T 3com_A 175 LTDTMA-KRNTVIGTPFWMAPEVIQEIGY 202 (314)
T ss_dssp CBTTBS-CBCCCCSCGGGCCHHHHSSSCB
T ss_pred hhhhcc-ccCccCCCCCccChhhcCCCCC
Confidence 654322 2234578999999999987654
No 189
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.95 E-value=6e-28 Score=242.10 Aligned_cols=173 Identities=26% Similarity=0.371 Sum_probs=141.0
Q ss_pred hcCCccc-ceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEE
Q 008026 394 TNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 394 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 470 (580)
.+.|++. +.||+|+||.||+|... +++.||||++.... ......+.+|++++.++ +||||+++++++.+.+..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4578874 78999999999999764 78999999997642 33457889999999995 69999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc---EEEEeecc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGL 547 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~ 547 (580)
||||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 89 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 99999999999998542 368899999999999999999998 79999999999999987765 99999999
Q ss_pred ccccCCCCC------CccccccccCCccCccccCC
Q 008026 548 VRLAPEGKG------SIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 548 a~~~~~~~~------~~~~~~~Gt~~y~APE~~~~ 576 (580)
++....... .......||+.|+|||++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 195 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHH
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhc
Confidence 876532211 11123469999999999754
No 190
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=6.9e-28 Score=239.46 Aligned_cols=177 Identities=27% Similarity=0.419 Sum_probs=146.2
Q ss_pred CCcccceeeccCcEEEEEEEEc-CC---cEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee-EE
Q 008026 396 NFSEENILGRGGFGTVYKGELH-DG---TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK-LL 470 (580)
Q Consensus 396 ~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~l 470 (580)
.|+..+.||+|+||.||+|.+. ++ ..||+|++... ......+.+.+|++++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4666799999999999999754 22 37999998752 3344567889999999999999999999999876655 99
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+.+++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 101 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EECCCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEecccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 9999999999998843 23568899999999999999999998 8999999999999999999999999999976
Q ss_pred cCCCC---CCccccccccCCccCccccCCCCCC
Q 008026 551 APEGK---GSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 551 ~~~~~---~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..... ........||+.|+|||.+.+..++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 206 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFT 206 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCC
Confidence 54321 1112335678999999999887653
No 191
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=5.4e-28 Score=239.00 Aligned_cols=175 Identities=25% Similarity=0.420 Sum_probs=145.2
Q ss_pred cCCcccc-eeeccCcEEEEEEEEc---CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 395 NNFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 395 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
++|.+.+ .||+|+||.||+|.+. ++..||+|++... ......+++.+|++++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566666 9999999999999753 5788999999764 2345567899999999999999999999999 4566899
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEECCTTEEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceee
Confidence 9999999999998842 23468999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCCc--cccccccCCccCccccCCCC
Q 008026 551 APEGKGSI--ETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 551 ~~~~~~~~--~~~~~Gt~~y~APE~~~~~~ 578 (580)
........ .....||+.|+|||++.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 189 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRK 189 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCE
T ss_pred eccCcceeeccccccccccccCHHHhccCC
Confidence 65432211 12235688999999986544
No 192
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.95 E-value=6.8e-28 Score=241.80 Aligned_cols=178 Identities=29% Similarity=0.388 Sum_probs=146.6
Q ss_pred hcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc----CCee
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEK 468 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~ 468 (580)
.++|++.+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 35799999999999999999987 47899999998653 34456788999999999999999999999873 3478
Q ss_pred EEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccc
Q 008026 469 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 548 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 548 (580)
++||||+++++|.+++..... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999999866433 23578999999999999999999998 79999999999999999999999999998
Q ss_pred cccCCCCCC--------ccccccccCCccCccccCCC
Q 008026 549 RLAPEGKGS--------IETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 549 ~~~~~~~~~--------~~~~~~Gt~~y~APE~~~~~ 577 (580)
+........ ......||+.|+|||++.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 218 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQ 218 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCC
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccC
Confidence 765321110 01224579999999998754
No 193
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=3.8e-28 Score=245.72 Aligned_cols=168 Identities=30% Similarity=0.522 Sum_probs=134.6
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHH--HHhcCCCcccceeeEEEc-----CC
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV--LTKVRHRHLVALLGHCLD-----GN 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~-----~~ 466 (580)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 36899999999999999999976 58999999986531 2334444444 455899999999986542 23
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCC---------CcEecCCCCCCeEecCC
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ---------SFIHRDLKPSNILLGDD 537 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~---------~ivH~Dlkp~NIll~~~ 537 (580)
..++||||+++|+|.+++.. ...++..+..++.||+.||+|||+ . +|+||||||+|||++.+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred eEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCC
Confidence 56899999999999999843 245888999999999999999997 5 99999999999999999
Q ss_pred CcEEEEeeccccccCCCC-------CCccccccccCCccCccccCC
Q 008026 538 MRAKVADFGLVRLAPEGK-------GSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 538 ~~~kl~Dfg~a~~~~~~~-------~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+.+||+|||+++...... ........||+.|+|||++.+
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 202 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTT
T ss_pred CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcC
Confidence 999999999998764321 111223569999999999876
No 194
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.95 E-value=5.2e-28 Score=243.29 Aligned_cols=172 Identities=27% Similarity=0.404 Sum_probs=141.0
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC------hhhHHHHHHHHHHHHhcCCCcccceeeEEEcC
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS------GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 465 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 465 (580)
..++|++.+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567999999999999999999775 6899999998754321 12234588999999999999999999998765
Q ss_pred CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc---EEE
Q 008026 466 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKV 542 (580)
Q Consensus 466 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl 542 (580)
. .++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred c-eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 5 8999999999999888732 3568999999999999999999998 89999999999999986654 999
Q ss_pred EeeccccccCCCCCCccccccccCCccCccccC
Q 008026 543 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
+|||+++..... .......||+.|+|||++.
T Consensus 159 ~Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~ 189 (322)
T 2ycf_A 159 TDFGHSKILGET--SLMRTLCGTPTYLAPEVLV 189 (322)
T ss_dssp CCCTTCEECCCC--HHHHHHHSCCTTCCHHHHH
T ss_pred ccCccceecccc--cccccccCCcCccCchhhc
Confidence 999999876432 2233457999999999973
No 195
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.95 E-value=7.1e-28 Score=246.54 Aligned_cols=173 Identities=25% Similarity=0.389 Sum_probs=145.1
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC-----Ce
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----NE 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 467 (580)
.++|++.+.||+|+||.||+|... +++.||+|++... ......+.+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 468999999999999999999765 6889999999753 2344557889999999999999999999998765 36
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 547 (580)
.++||||++ ++|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 105 ~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcc
Confidence 899999997 589888743 358899999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCC--ccccccccCCccCccccCCC
Q 008026 548 VRLAPEGKGS--IETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 548 a~~~~~~~~~--~~~~~~Gt~~y~APE~~~~~ 577 (580)
++........ ......||+.|+|||++.+.
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 206 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTB
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCC
Confidence 9866432211 12345799999999986543
No 196
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.95 E-value=9e-28 Score=250.85 Aligned_cols=174 Identities=24% Similarity=0.290 Sum_probs=146.7
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc------CCCcccceeeEEEcC
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV------RHRHLVALLGHCLDG 465 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~ 465 (580)
+..+|++.+.||+|+||.||+|... +++.||||++... ......+.+|+++++.+ .|+||+++++++...
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 3467999999999999999999765 6899999999752 33446777888888877 577999999999999
Q ss_pred CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc--EEEE
Q 008026 466 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR--AKVA 543 (580)
Q Consensus 466 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~ 543 (580)
+..++||||++ ++|.+++.. .....+++..+..++.||+.||+|||+ .+||||||||+|||++.++. +||+
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~ 244 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKK---NKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVI 244 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEEC
T ss_pred CeEEEEEeccC-CCHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEe
Confidence 99999999996 689888854 233458999999999999999999998 79999999999999998887 9999
Q ss_pred eeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 544 Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|||+|+..... ....+||+.|+|||++.+..|+
T Consensus 245 DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~ 277 (429)
T 3kvw_A 245 DFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYG 277 (429)
T ss_dssp CCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCC
T ss_pred ecccceecCCc----ccccCCCCCccChHHHhCCCCC
Confidence 99999765432 2335789999999999887653
No 197
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.95 E-value=5.9e-28 Score=247.68 Aligned_cols=169 Identities=25% Similarity=0.402 Sum_probs=142.9
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee---
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK--- 468 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 468 (580)
+.++|.+.+.||+|+||.||+|... +++.||+|++..........+.+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 3578999999999999999999765 689999999987555555667889999999999999999999999877654
Q ss_pred ---EEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEee
Q 008026 469 ---LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 545 (580)
Q Consensus 469 ---~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 545 (580)
++||||++ ++|.+++. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECST
T ss_pred eeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEec
Confidence 99999997 58876652 348999999999999999999998 89999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccCCccCccccCC
Q 008026 546 GLVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 546 g~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
|+++..... .....||+.|+|||++.+
T Consensus 189 g~a~~~~~~----~~~~~~t~~y~aPE~~~~ 215 (371)
T 4exu_A 189 GLARHADAE----MTGYVVTRWYRAPEVILS 215 (371)
T ss_dssp TCC------------CTTCCCTTSCHHHHSC
T ss_pred CcccccccC----cCCcccCccccCHHHhcC
Confidence 999865432 234578999999999876
No 198
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.95 E-value=6.8e-28 Score=244.34 Aligned_cols=177 Identities=27% Similarity=0.374 Sum_probs=145.7
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHH-HHhcCCCcccceeeEEEcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAV-LTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
..++|++.+.||+|+||.||+|+. .+++.||||++...... ....++..|..+ ++.++||||+++++++...+..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC-HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc-HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 356899999999999999999976 47899999999764333 334455566655 777899999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++ +|.+++..... ....+++..+..++.||+.||+|||+ +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~--~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999975 99888865433 33578999999999999999999997 13999999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCccCccccCC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
..... ......||+.|+|||++.+
T Consensus 204 ~~~~~--~~~~~~gt~~y~aPE~~~~ 227 (340)
T 3an0_A 204 LVDSV--AKTIDAGCKPYMAPERINP 227 (340)
T ss_dssp HSCHH--HHHHSSCCCCCCCHHHHSC
T ss_pred ccccc--ccccCCCCccccCcccccc
Confidence 64321 2233479999999999753
No 199
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.95 E-value=1.2e-27 Score=241.39 Aligned_cols=164 Identities=21% Similarity=0.373 Sum_probs=142.8
Q ss_pred cCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEEc--CCeeEE
Q 008026 395 NNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLD--GNEKLL 470 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~l 470 (580)
++|++.+.||+|+||.||+|.. .+++.||+|++... ..+.+.+|++++++++ ||||+++++++.. ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 6799999999999999999976 47899999998642 2467899999999997 9999999999987 567899
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCC-cEEEEeecccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVR 549 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~ 549 (580)
||||+++++|.+++. .+++.++..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++
T Consensus 111 v~e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 999999999988872 37888999999999999999998 8999999999999999766 89999999998
Q ss_pred ccCCCCCCccccccccCCccCccccCC
Q 008026 550 LAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 550 ~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
....... .....||+.|+|||++.+
T Consensus 180 ~~~~~~~--~~~~~~~~~y~aPE~~~~ 204 (330)
T 3nsz_A 180 FYHPGQE--YNVRVASRYFKGPELLVD 204 (330)
T ss_dssp ECCTTCC--CCSCCSCGGGCCHHHHTT
T ss_pred EcCCCCc--cccccccccccChhhhcC
Confidence 7654332 233578999999999876
No 200
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.95 E-value=7.9e-28 Score=242.29 Aligned_cols=179 Identities=27% Similarity=0.381 Sum_probs=146.3
Q ss_pred hhcCCcccceeeccCcEEEEEEEE--cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhc---CCCcccceeeEEE----
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV---RHRHLVALLGHCL---- 463 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~---- 463 (580)
..++|++.+.||+|+||.||+|+. .+++.||+|++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 447899999999999999999987 3688999999976443333334566777777766 8999999999987
Q ss_pred -cCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEE
Q 008026 464 -DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 542 (580)
Q Consensus 464 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 542 (580)
.....++||||++ ++|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEE
Confidence 4567899999997 5999888542 22358899999999999999999998 89999999999999999999999
Q ss_pred EeeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 543 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+|||+++...... ......||+.|+|||++.+..++
T Consensus 162 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~ 197 (326)
T 1blx_A 162 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYA 197 (326)
T ss_dssp CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCC
T ss_pred ecCcccccccCCC--CccccccccceeCHHHHhcCCCC
Confidence 9999997654321 23345789999999999877653
No 201
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.95 E-value=4.1e-28 Score=246.73 Aligned_cols=178 Identities=24% Similarity=0.395 Sum_probs=150.9
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChh---------------hHHHHHHHHHHHHhcCCCcccce
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGK---------------GLTEFKSEIAVLTKVRHRHLVAL 458 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~~ 458 (580)
.++|++.+.||+|+||.||+|.. +++.||+|++........ ..+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 899999999976432211 12789999999999999999999
Q ss_pred eeEEEcCCeeEEEEEecCCCChhHHHHHH---hhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec
Q 008026 459 LGHCLDGNEKLLVFEYMPQGTLSRHIFNW---AEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG 535 (580)
Q Consensus 459 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~ 535 (580)
++++.+.+..++||||+++++|.+++... .......+++..+..++.|++.||+|||+ ..+|+||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 99999999999999999999999883210 11124578999999999999999999996 37899999999999999
Q ss_pred CCCcEEEEeeccccccCCCCCCccccccccCCccCccccCCC
Q 008026 536 DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 536 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
.++.+||+|||.++..... ......||+.|+|||++.+.
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~ 225 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNE 225 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSC
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCC
Confidence 9999999999999876443 23345789999999999876
No 202
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.5e-28 Score=250.11 Aligned_cols=176 Identities=30% Similarity=0.451 Sum_probs=135.9
Q ss_pred CCcccceeeccCcEEEEEEEEc--C--CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc-CCeeEE
Q 008026 396 NFSEENILGRGGFGTVYKGELH--D--GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD-GNEKLL 470 (580)
Q Consensus 396 ~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~l 470 (580)
.|++.+.||+|+||.||+|... + +..||+|.+... ......+++.+|+.++++++||||+++++++.. .+..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 4777899999999999999764 2 246899988652 334556789999999999999999999998754 457899
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++++|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 169 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEECCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEECCCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999999843 23457889999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCC---ccccccccCCccCccccCCCCC
Q 008026 551 APEGKGS---IETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 551 ~~~~~~~---~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
....... ......||+.|+|||++.+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 273 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCC
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCC
Confidence 5432211 1223457889999999877655
No 203
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.95 E-value=4.2e-28 Score=244.35 Aligned_cols=175 Identities=30% Similarity=0.461 Sum_probs=143.1
Q ss_pred HHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEc----
Q 008026 391 RNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD---- 464 (580)
Q Consensus 391 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~---- 464 (580)
....++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 345678999999999999999999874 78999999987532 2346788999999999 79999999999987
Q ss_pred --CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEE
Q 008026 465 --GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 542 (580)
Q Consensus 465 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 542 (580)
.+..++||||+++++|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEE
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEE
Confidence 467899999999999999986532 2368889999999999999999998 89999999999999999999999
Q ss_pred EeeccccccCCCCCCccccccccCCccCccccC
Q 008026 543 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
+|||++........ ......||+.|+|||++.
T Consensus 171 ~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 202 (326)
T 2x7f_A 171 VDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIA 202 (326)
T ss_dssp CCCTTTC--------------CCGGGCCHHHHC
T ss_pred eeCcCceecCcCcc-ccccccCCccccChhhhc
Confidence 99999886543321 223457899999999986
No 204
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.95 E-value=3.9e-28 Score=240.48 Aligned_cols=175 Identities=26% Similarity=0.410 Sum_probs=143.1
Q ss_pred cCCcccc-eeeccCcEEEEEEEEc---CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEE
Q 008026 395 NNFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 395 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 470 (580)
++|++.+ .||+|+||.||+|.+. +++.||+|++..........+++.+|+++++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 5688887 9999999999999543 468899999976544445567899999999999999999999999 5667899
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 95 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 9999999999998843 2458899999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCCcc--ccccccCCccCccccCCCC
Q 008026 551 APEGKGSIE--TRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 551 ~~~~~~~~~--~~~~Gt~~y~APE~~~~~~ 578 (580)
......... ....||+.|+|||++.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 196 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYK 196 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCE
T ss_pred eccCCCcccccccCCCCceeeChHHhccCC
Confidence 654432211 2234678899999986543
No 205
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.95 E-value=3.8e-28 Score=244.63 Aligned_cols=177 Identities=29% Similarity=0.450 Sum_probs=139.2
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcE----EEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
++|++.+.||+|+||.||+|++. +++. ||+|.+... ......+.+.+|+.++++++||||+++++++.... .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 57999999999999999999764 4544 577766542 23445678999999999999999999999998764 78
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+|+||+.+++|.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 93 ~v~~~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEECCCSSCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred EEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 99999999999998854 23468899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCC-ccccccccCCccCccccCCCCCC
Q 008026 550 LAPEGKGS-IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 550 ~~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
........ ......||+.|+|||++.+..++
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 197 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCC
Confidence 76443221 12234568899999998776653
No 206
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.95 E-value=3.7e-28 Score=244.86 Aligned_cols=178 Identities=34% Similarity=0.513 Sum_probs=143.2
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcE--EEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTK--IAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 470 (580)
++|++.+.||+|+||.||+|+.. ++.. ||+|.+... ......+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 57899999999999999999765 5664 499988753 2334456789999999999 89999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhh-----------hCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc
Q 008026 471 VFEYMPQGTLSRHIFNWAE-----------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR 539 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 539 (580)
||||+++++|.+++..... .....+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence 9999999999999854320 123468999999999999999999998 89999999999999999999
Q ss_pred EEEEeeccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 540 AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 540 ~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
+||+|||+++...... ......+++.|+|||++.+..
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~ 217 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSV 217 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCE
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhcccc
Confidence 9999999987543221 122245788999999986544
No 207
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.95 E-value=1.1e-27 Score=236.86 Aligned_cols=177 Identities=28% Similarity=0.403 Sum_probs=151.8
Q ss_pred HHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 391 RNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 391 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
..+.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.+|++++++++||||+++++++...+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 345578999999999999999999875 7899999999876555556788999999999999999999999999999999
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC---CcEEEEeec
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVADFG 546 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg 546 (580)
+||||+++++|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.+ +.+||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999998887431 358899999999999999999998 899999999999999754 469999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
+++....... .....||+.|+|||++.+.
T Consensus 170 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~ 198 (287)
T 2wei_A 170 LSTCFQQNTK--MKDRIGTAYYIAPEVLRGT 198 (287)
T ss_dssp GGGTBCCCSS--CSCHHHHHTTCCHHHHTTC
T ss_pred cceeecCCCc--cccccCcccccChHHhcCC
Confidence 9987644322 2334689999999998753
No 208
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.95 E-value=5.2e-28 Score=264.08 Aligned_cols=171 Identities=27% Similarity=0.400 Sum_probs=140.7
Q ss_pred ceeeccCcEEEEEEEEc---CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEecCC
Q 008026 401 NILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQ 477 (580)
Q Consensus 401 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 477 (580)
+.||+|+||.||+|.+. +++.||||+++.........+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 57999999999999653 46789999998765555567889999999999999999999999864 458899999999
Q ss_pred CChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccCCCCCC
Q 008026 478 GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS 557 (580)
Q Consensus 478 g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 557 (580)
|+|.+++.. ...+++.+++.|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+........
T Consensus 454 g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999843 2468899999999999999999998 89999999999999999999999999999876543321
Q ss_pred --ccccccccCCccCccccCCCCCC
Q 008026 558 --IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 558 --~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
......||+.|+|||++.+..++
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~ 550 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFS 550 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCC
T ss_pred cccccCCCCceeeeChhhhcCCCCC
Confidence 12234568899999999776653
No 209
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=238.03 Aligned_cols=178 Identities=22% Similarity=0.365 Sum_probs=144.8
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC--hhhHHHHHHHHHHHHhcCCCcccceeeEEE--cCCe
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS--GKGLTEFKSEIAVLTKVRHRHLVALLGHCL--DGNE 467 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~ 467 (580)
..++|++.+.||+|+||.||+|... +++.||+|++...... ......+.+|++++++++||||+++++++. ....
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3578999999999999999999875 6899999999764321 234578999999999999999999999985 4457
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 547 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 547 (580)
.++||||++++ |.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccc
Confidence 89999999876 76666432 23568999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCC-CCccccccccCCccCccccCCC
Q 008026 548 VRLAPEGK-GSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 548 a~~~~~~~-~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
+....... ........||+.|+|||++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 186 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGL 186 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCC
T ss_pred ccccCccccccccccCCCCCCCcChhhccCc
Confidence 98764322 1222345689999999998764
No 210
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.95 E-value=1.8e-27 Score=236.42 Aligned_cols=174 Identities=30% Similarity=0.370 Sum_probs=148.9
Q ss_pred HhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc---C----hhhHHHHHHHHHHHHhcC-CCcccceeeEE
Q 008026 392 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI---S----GKGLTEFKSEIAVLTKVR-HRHLVALLGHC 462 (580)
Q Consensus 392 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~----~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 462 (580)
...++|++.+.||+|+||.||+|... +++.||+|++..... . ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 45678999999999999999999875 689999999975421 1 123456889999999996 99999999999
Q ss_pred EcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEE
Q 008026 463 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 542 (580)
Q Consensus 463 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 542 (580)
...+..++||||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 165 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKL 165 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEE
Confidence 9999999999999999999998541 368899999999999999999998 89999999999999999999999
Q ss_pred EeeccccccCCCCCCccccccccCCccCccccC
Q 008026 543 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
+|||++....... ......||+.|+|||++.
T Consensus 166 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~ 196 (298)
T 1phk_A 166 TDFGFSCQLDPGE--KLREVCGTPSYLAPEIIE 196 (298)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHH
T ss_pred ecccchhhcCCCc--ccccccCCccccCHHHhc
Confidence 9999998765432 223457899999999874
No 211
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=247.84 Aligned_cols=178 Identities=18% Similarity=0.224 Sum_probs=139.8
Q ss_pred hcCCcccceeeccCcEEEEEEEEc----CCcEEEEEEeeccccCh---------hhHHHHHHHHHHHHhcCCCcccceee
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG---------KGLTEFKSEIAVLTKVRHRHLVALLG 460 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~~~~ 460 (580)
.++|++.+.||+|+||.||+|... ++..||+|++....... .....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999875 57889999987642111 01234667889999999999999999
Q ss_pred EEEc----CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC
Q 008026 461 HCLD----GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 536 (580)
Q Consensus 461 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~ 536 (580)
++.. ....++||||+ +++|.+++... ..+++.+++.++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEcc
Confidence 9988 67889999999 99999988431 268999999999999999999998 89999999999999987
Q ss_pred CC--cEEEEeeccccccCCCCC------CccccccccCCccCccccCCCCCC
Q 008026 537 DM--RAKVADFGLVRLAPEGKG------SIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 537 ~~--~~kl~Dfg~a~~~~~~~~------~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++ .+||+|||+++....... .......||+.|+|||++.+..++
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 238 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALS 238 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCC
Confidence 77 999999999986543211 112345799999999999877653
No 212
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.95 E-value=3.8e-28 Score=247.45 Aligned_cols=172 Identities=15% Similarity=0.243 Sum_probs=143.0
Q ss_pred cCCcccceeeccCcEEEEEEEEcC---------CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccc--------
Q 008026 395 NNFSEENILGRGGFGTVYKGELHD---------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA-------- 457 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------- 457 (580)
++|++.+.||+|+||.||+|+... ++.||+|++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 579999999999999999997753 789999998753 35789999999999999998
Q ss_pred -------eeeEEEc-CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCC
Q 008026 458 -------LLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKP 529 (580)
Q Consensus 458 -------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp 529 (580)
+++++.. ....++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||+ .+|+||||||
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp 187 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTA 187 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCH
Confidence 5677765 67889999999 999999986421 2468999999999999999999998 8999999999
Q ss_pred CCeEecCCC--cEEEEeeccccccCCCCC------CccccccccCCccCccccCCCCCC
Q 008026 530 SNILLGDDM--RAKVADFGLVRLAPEGKG------SIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 530 ~NIll~~~~--~~kl~Dfg~a~~~~~~~~------~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+||+++.++ .+||+|||+++....... .......||+.|+|||++.+..++
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 246 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPS 246 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCC
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCC
Confidence 999999988 899999999976543221 112335799999999999887653
No 213
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.95 E-value=7.8e-28 Score=249.89 Aligned_cols=177 Identities=29% Similarity=0.405 Sum_probs=131.0
Q ss_pred hcCCcc-cceeeccCcEEEEEEEEc---CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc--CCe
Q 008026 394 TNNFSE-ENILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD--GNE 467 (580)
Q Consensus 394 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~ 467 (580)
.+.|++ .++||+|+||.||+|+.. +++.||+|++..... ...+.+|++++++++||||+++++++.. ...
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 345666 458999999999999865 578899999975332 2467899999999999999999999954 678
Q ss_pred eEEEEEecCCCChhHHHHHHhhh----CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe----cCCCc
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEE----GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMR 539 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~ 539 (580)
.++||||++ ++|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCc
Confidence 899999996 5888877543322 12248999999999999999999998 899999999999999 67789
Q ss_pred EEEEeeccccccCCCCC--CccccccccCCccCccccCCCC
Q 008026 540 AKVADFGLVRLAPEGKG--SIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 540 ~kl~Dfg~a~~~~~~~~--~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
+||+|||+|+....... ......+||+.|+|||++.+.+
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 211 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGAR 211 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCC
Confidence 99999999987654321 1223467999999999998743
No 214
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=7.3e-28 Score=242.63 Aligned_cols=176 Identities=28% Similarity=0.519 Sum_probs=146.6
Q ss_pred hcCCcccceeeccCcEEEEEEEE-----cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCC--
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN-- 466 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-- 466 (580)
.++|++.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 35689999999999999999984 36899999998763 3445678999999999999999999999987654
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH----STTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred ceEEEEECCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCc
Confidence 67999999999999999854 22458899999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCCc--cccccccCCccCccccCCCC
Q 008026 547 LVRLAPEGKGSI--ETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 547 ~a~~~~~~~~~~--~~~~~Gt~~y~APE~~~~~~ 578 (580)
+++......... .....|+..|+|||++.+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 224 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 224 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCE
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCC
Confidence 998765433211 12245778899999986543
No 215
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.95 E-value=7.5e-28 Score=262.18 Aligned_cols=176 Identities=24% Similarity=0.401 Sum_probs=141.3
Q ss_pred CCcccc-eeeccCcEEEEEEEEc---CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 396 NFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 396 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
++.+.+ .||+|+||.||+|.+. ++..||||+++.. ......+++.+|++++++++||||+++++++.. +..++|
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC-CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 344444 7999999999999764 4567999999764 234456789999999999999999999999976 568999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++|+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 414 ~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EECCTTCBHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEeCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 999999999998843 23468999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCcc--ccccccCCccCccccCCCCCC
Q 008026 552 PEGKGSIE--TRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 552 ~~~~~~~~--~~~~Gt~~y~APE~~~~~~~~ 580 (580)
........ ....+|+.|+|||++.+..++
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~ 517 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFS 517 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCC
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCC
Confidence 44322111 123457899999998766653
No 216
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.4e-28 Score=262.88 Aligned_cols=164 Identities=22% Similarity=0.240 Sum_probs=125.7
Q ss_pred eeeccCcEEEEEE-EEcCCcEEEEEEeecccc--------ChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEEE
Q 008026 402 ILGRGGFGTVYKG-ELHDGTKIAVKRMEAGVI--------SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 402 ~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 471 (580)
..+.|++|.+..+ +...|+.||+|++.+... .....+++.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3566777777666 344689999999976421 123346799999999999 599999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||++|++|.+++.+ ..+++.. +|+.||+.||+|+|+ ++||||||||+|||+++++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 999999999999843 2355554 578999999999998 89999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCccCccccCCC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
.... ......+||+.|||||++.+.
T Consensus 390 ~~~~-~~~~t~vGTp~YmAPE~l~g~ 414 (569)
T 4azs_A 390 PQDC-SWPTNLVQSFFVFVNELFAEN 414 (569)
T ss_dssp C----CCSHHHHHHHHHHHHHHC---
T ss_pred CCCC-ccccCceechhhccHHHhCCC
Confidence 5443 233457899999999999764
No 217
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.95 E-value=1.6e-27 Score=248.28 Aligned_cols=170 Identities=25% Similarity=0.416 Sum_probs=138.4
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC----C--e
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG----N--E 467 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~--~ 467 (580)
.+|++.+.||+|+||.||+|++. +++.||||++.... ....+|++++++++||||+++++++... + .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 36899999999999999999875 68999999986532 1234799999999999999999988542 2 3
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC-CcEEEEeec
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG 546 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg 546 (580)
.++||||+++ ++.+.+..... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEeehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccch
Confidence 5799999975 67666654332 33578999999999999999999997 899999999999999955 678999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
+++....... .....||+.|+|||++.+.
T Consensus 203 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~ 231 (420)
T 1j1b_A 203 SAKQLVRGEP--NVSYICSRYYRAPELIFGA 231 (420)
T ss_dssp TCEECCTTCC--CCSCCSCTTSCCHHHHTTC
T ss_pred hhhhcccCCC--ceeeeeCCCcCCHHHHcCC
Confidence 9987654332 2345789999999998764
No 218
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.95 E-value=2.5e-28 Score=243.15 Aligned_cols=179 Identities=26% Similarity=0.432 Sum_probs=132.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|... +++.||+|++..... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 468999999999999999999764 689999998865322 234567889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhh---CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 473 EYMPQGTLSRHIFNWAEE---GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
||+++++|.+++...... ....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998654332 23458999999999999999999998 899999999999999999999999999987
Q ss_pred ccCCCCC----CccccccccCCccCccccCC
Q 008026 550 LAPEGKG----SIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 550 ~~~~~~~----~~~~~~~Gt~~y~APE~~~~ 576 (580)
....... .......||+.|+|||++.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 200 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 200 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHH
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhcc
Confidence 6543221 11233579999999998754
No 219
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.95 E-value=5.9e-28 Score=243.41 Aligned_cols=182 Identities=26% Similarity=0.359 Sum_probs=145.4
Q ss_pred hcCCcccceeeccCcEEEEEEEE------cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 394 TNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
.++|++.+.||+|+||.||+|++ .++..||+|++... .......++.+|+.++++++||||+++++++.....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 35799999999999999999974 25778999999653 244456788999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHHHhhh--CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC---CCcEEE
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEE--GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKV 542 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 542 (580)
.++||||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999998653221 12358899999999999999999998 89999999999999984 446999
Q ss_pred EeeccccccCCCCC-CccccccccCCccCccccCCCCC
Q 008026 543 ADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~-~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
+|||+++....... .......||+.|+|||++.+..+
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 222 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 222 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCC
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCC
Confidence 99999875533221 12233568999999999876654
No 220
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.95 E-value=1.5e-27 Score=246.49 Aligned_cols=171 Identities=24% Similarity=0.394 Sum_probs=138.9
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe------
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE------ 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 467 (580)
..+|++.+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 346999999999999999999987777799998865321 12379999999999999999999865433
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec-CCCcEEEEeec
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFG 546 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg 546 (580)
.++||||+++ ++.+.+..... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||
T Consensus 113 ~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 113 LNLVLEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 7899999976 44444433222 23578999999999999999999998 8999999999999999 78999999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
+|+....... .....||+.|+|||++.+.
T Consensus 188 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~ 216 (394)
T 4e7w_A 188 SAKILIAGEP--NVSYICSRYYRAPELIFGA 216 (394)
T ss_dssp TCEECCTTCC--CCSSCSCGGGCCHHHHTTC
T ss_pred CcccccCCCC--CcccccCcCccCHHHHcCC
Confidence 9987644332 2345789999999998764
No 221
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.95 E-value=5.7e-28 Score=240.59 Aligned_cols=172 Identities=26% Similarity=0.428 Sum_probs=142.1
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
..++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 3468999999999999999999876 6899999998753 233467889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 95 ~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 9999999999887542 2458899999999999999999998 89999999999999999999999999987543
Q ss_pred CCCCCCccccccccCCccCcccc
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYA 574 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~ 574 (580)
.... .......||+.|+|||++
T Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~ 189 (302)
T 2j7t_A 168 LKTL-QKRDSFIGTPYWMAPEVV 189 (302)
T ss_dssp HHHH-HC-----CCGGGCCHHHH
T ss_pred cccc-cccccccCChhhcCCeee
Confidence 2111 111234689999999997
No 222
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.95 E-value=2.1e-27 Score=242.07 Aligned_cols=173 Identities=29% Similarity=0.424 Sum_probs=143.3
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC-----C
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----N 466 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 466 (580)
+.++|++.+.||+|+||.||+|... +++.||||++... ........+.+|++++++++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 3578999999999999999999875 6899999999642 2334456788999999999999999999987654 6
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecc
Confidence 7899999997 589888743 368899999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCC---------ccccccccCCccCccccCC
Q 008026 547 LVRLAPEGKGS---------IETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 547 ~a~~~~~~~~~---------~~~~~~Gt~~y~APE~~~~ 576 (580)
+++........ ......||+.|+|||++.+
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 196 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHS
T ss_pred cccccccccccccCccccccchhhccccccccCCeeecc
Confidence 99876432211 1123578999999998754
No 223
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.95 E-value=3e-27 Score=239.22 Aligned_cols=174 Identities=28% Similarity=0.406 Sum_probs=147.3
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-c-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCc------ccceeeEEEc
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-H-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH------LVALLGHCLD 464 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~ 464 (580)
+.++|++.+.||+|+||.||+|.. . +++.||+|++... ....+.+.+|+++++.++|++ ++++++++..
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 356899999999999999999976 3 6889999998652 344567889999999987654 9999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC--------
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-------- 536 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~-------- 536 (580)
.+..++||||+ +++|.+++.. .....+++.++..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC
T ss_pred CCcEEEEEcCC-CCCHHHHHHh---cCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccC
Confidence 99999999999 8899998854 233468899999999999999999998 89999999999999987
Q ss_pred -----------CCcEEEEeeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 537 -----------DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 537 -----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++.+||+|||+++..... .....||+.|+|||++.+.+++
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~ 212 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWS 212 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCC
T ss_pred CccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCC
Confidence 668999999999865432 2335789999999999887653
No 224
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=243.16 Aligned_cols=168 Identities=25% Similarity=0.397 Sum_probs=142.0
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe-----
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE----- 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 467 (580)
.++|.+.+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 468999999999999999999775 68999999997755455556788999999999999999999999987654
Q ss_pred -eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 468 -KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 468 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
.++||||++ ++|.+++. ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999997 58877652 248899999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+++..... .....||+.|+|||++.+
T Consensus 172 ~~~~~~~~----~~~~~~t~~y~aPE~~~~ 197 (353)
T 3coi_A 172 LARHADAE----MTGYVVTRWYRAPEVILS 197 (353)
T ss_dssp CTTC------------CCSBCCSCHHHHSC
T ss_pred cccCCCCC----ccccccCcCcCCHHHHhC
Confidence 99865432 234578999999999876
No 225
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=234.91 Aligned_cols=174 Identities=25% Similarity=0.403 Sum_probs=143.5
Q ss_pred CCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEEEe
Q 008026 396 NFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 474 (580)
Q Consensus 396 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 474 (580)
+|.....||+|+||.||+|... ++..||+|++... .....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 4555679999999999999764 6889999998764 233457789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC-CCcEEEEeeccccccCC
Q 008026 475 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-DMRAKVADFGLVRLAPE 553 (580)
Q Consensus 475 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 553 (580)
+++++|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 101 VPGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp CSEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred CCCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999988542 122356788899999999999999998 89999999999999987 89999999999987643
Q ss_pred CCCCccccccccCCccCccccCCC
Q 008026 554 GKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 554 ~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
.. .......||+.|+|||++.+.
T Consensus 176 ~~-~~~~~~~~~~~y~aPE~~~~~ 198 (295)
T 2clq_A 176 IN-PCTETFTGTLQYMAPEIIDKG 198 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHG
T ss_pred CC-CcccccCCCccccChhhhcCC
Confidence 32 122345789999999998653
No 226
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.95 E-value=2.2e-27 Score=239.21 Aligned_cols=175 Identities=25% Similarity=0.355 Sum_probs=129.3
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHH-HHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIA-VLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|... +++.||||++.... ......++.+|+. +++.++||||+++++++...+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 367899999999999999999875 78999999997643 3334455666666 67778999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCC-CcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
|||+++ +|.+++..........+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999975 88887765444345678999999999999999999998 6 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCccCccccC
Q 008026 551 APEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 551 ~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
..... ......||+.|+|||++.
T Consensus 176 ~~~~~--~~~~~~gt~~y~aPE~~~ 198 (327)
T 3aln_A 176 LVDSI--AKTRDAGCRPYMAPERID 198 (327)
T ss_dssp -------------------------
T ss_pred ccccc--ccccCCCCccccCceeec
Confidence 64432 123346999999999983
No 227
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=239.51 Aligned_cols=172 Identities=27% Similarity=0.367 Sum_probs=130.2
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEE--------c
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCL--------D 464 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~ 464 (580)
.+|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.+++++. ||||+++++++. .
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 47899999999999999999865 7899999998653 3445577899999999996 999999999984 2
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeEecCCCcEEE
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKV 542 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl 542 (580)
....++||||++ |+|.+++..... ...+++.+++.++.||+.||+|||+ .+ |+||||||+|||++.++.+||
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred CceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEE
Confidence 345789999995 699988865332 3468999999999999999999997 67 999999999999999999999
Q ss_pred EeeccccccCCCCCCc-----------cccccccCCccCcccc
Q 008026 543 ADFGLVRLAPEGKGSI-----------ETRIAGTFGYLAPEYA 574 (580)
Q Consensus 543 ~Dfg~a~~~~~~~~~~-----------~~~~~Gt~~y~APE~~ 574 (580)
+|||+++......... .....||+.|+|||++
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 222 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222 (337)
T ss_dssp CCCTTCBCCSSCC------------------------------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence 9999998765432111 1134689999999998
No 228
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.95 E-value=9.9e-28 Score=235.91 Aligned_cols=171 Identities=33% Similarity=0.511 Sum_probs=138.2
Q ss_pred hcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcC-CeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-NEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|+.. ++.||+|++... ...+.+.+|++++++++||||+++++++... +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 357999999999999999999875 889999998753 2456789999999999999999999987654 4789999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp CCCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred ecCCCCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999865322 237888999999999999999998 899999999999999999999999999987654
Q ss_pred CCCCCccccccccCCccCccccCCCCC
Q 008026 553 EGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 553 ~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
... ....+++.|+|||++.+.++
T Consensus 169 ~~~----~~~~~~~~y~aPE~~~~~~~ 191 (278)
T 1byg_A 169 STQ----DTGKLPVKWTAPEALREKKF 191 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCC
T ss_pred ccc----cCCCccccccCHHHhCCCCC
Confidence 322 22357899999999876654
No 229
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.95 E-value=4.9e-27 Score=233.06 Aligned_cols=176 Identities=22% Similarity=0.375 Sum_probs=145.5
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEE-EcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC-LDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~l 470 (580)
..++|++.+.||+|+||.||+|+. .+++.||+|++..... ..++.+|+++++.++|++++..+.++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 357899999999999999999986 5789999999875432 24688999999999988876665554 56678899
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe---cCCCcEEEEeecc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 547 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~ 547 (580)
||||+ +++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 99999 8999998843 22468999999999999999999998 899999999999999 4788999999999
Q ss_pred ccccCCCCCC------ccccccccCCccCccccCCCCCC
Q 008026 548 VRLAPEGKGS------IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 548 a~~~~~~~~~------~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++........ ......||+.|+|||++.+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 193 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQS 193 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCC
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCC
Confidence 9876544321 12345799999999999887653
No 230
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.95 E-value=4.4e-27 Score=233.33 Aligned_cols=176 Identities=22% Similarity=0.375 Sum_probs=141.9
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEE-EcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC-LDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~l 470 (580)
+.++|++.+.||+|+||.||+|+. .+++.||+|++..... ..++.+|+++++.++|++++..+..+ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 457899999999999999999986 4789999998765322 23578899999999988877666655 66778899
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe---cCCCcEEEEeecc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 547 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~ 547 (580)
||||+ +++|.+++.. ....+++.++..++.||+.||+|||+ .+|+||||||+||++ ++++.+||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEECC-CCBHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEcc-CCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 99999 9999998843 22468999999999999999999998 899999999999999 7889999999999
Q ss_pred ccccCCCCCC------ccccccccCCccCccccCCCCCC
Q 008026 548 VRLAPEGKGS------IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 548 a~~~~~~~~~------~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++........ ......||+.|+|||++.+..++
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 193 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQS 193 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCC
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCC
Confidence 9876543321 12345799999999999887653
No 231
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.95 E-value=1.7e-27 Score=246.71 Aligned_cols=174 Identities=27% Similarity=0.326 Sum_probs=144.6
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC--------CCcccceeeEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--------HRHLVALLGHCL 463 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~ 463 (580)
+.++|++.+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 3478999999999999999999764 6899999999752 344567889999999985 788999999987
Q ss_pred ----cCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCC-CcEecCCCCCCeEecCCC
Q 008026 464 ----DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDM 538 (580)
Q Consensus 464 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~ 538 (580)
.....++||||+ ++++.+.+.. .....+++..++.++.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccc
Confidence 556789999999 5677666643 223468999999999999999999998 6 999999999999998775
Q ss_pred -------------------------------------------------cEEEEeeccccccCCCCCCccccccccCCcc
Q 008026 539 -------------------------------------------------RAKVADFGLVRLAPEGKGSIETRIAGTFGYL 569 (580)
Q Consensus 539 -------------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~ 569 (580)
.+||+|||.++..... .....||+.|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~ 260 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYR 260 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGC
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCccc
Confidence 7999999999876432 23347899999
Q ss_pred CccccCCCCCC
Q 008026 570 APEYAGNFGSS 580 (580)
Q Consensus 570 APE~~~~~~~~ 580 (580)
|||++.+.+|+
T Consensus 261 aPE~~~~~~~~ 271 (397)
T 1wak_A 261 SLEVLIGSGYN 271 (397)
T ss_dssp CHHHHHTSCCC
T ss_pred CChhhcCCCCC
Confidence 99999887653
No 232
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.95 E-value=8.9e-28 Score=246.48 Aligned_cols=170 Identities=12% Similarity=0.089 Sum_probs=126.6
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhc--CCCccccee-------eEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV--RHRHLVALL-------GHCL 463 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~ 463 (580)
.+|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45889999999999999999865 789999999987543 234456777885544444 699988755 4443
Q ss_pred cC-----------------CeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHH------HHHHHHHHHHHHHHHhCCCC
Q 008026 464 DG-----------------NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDVARGVEYLHGLAHQ 520 (580)
Q Consensus 464 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------~~i~~~i~~aL~~LH~~~~~ 520 (580)
.. ...|+||||++ ++|.+++..... .+++..+ ..++.||+.||+|||+ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQS---K 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHH---C
Confidence 32 23799999998 899999965422 2344445 6788999999999998 8
Q ss_pred CcEecCCCCCCeEecCCCcEEEEeeccccccCCCCCCccccccccCCccCccccCC
Q 008026 521 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 521 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 576 (580)
+|+||||||+|||++.++.+||+|||+|+..... .....||+.|+|||++.+
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~ 265 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNA 265 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTC
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccC
Confidence 9999999999999999999999999999866432 213457799999999976
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.95 E-value=2.7e-27 Score=241.84 Aligned_cols=180 Identities=25% Similarity=0.311 Sum_probs=135.2
Q ss_pred HHHHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe
Q 008026 389 VLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 467 (580)
Q Consensus 389 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 467 (580)
......++|++.+.||+|+||.||+|+.. +++.||||++.... .......+|++.++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 44556689999999999999999999875 68999999986532 223456778888999999999999999876433
Q ss_pred -------eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHH--hCCCCCcEecCCCCCCeEecC-C
Q 008026 468 -------KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH--GLAHQSFIHRDLKPSNILLGD-D 537 (580)
Q Consensus 468 -------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH--~~~~~~ivH~Dlkp~NIll~~-~ 537 (580)
.++||||+++ +|.+.+..... ....+++..+..++.|++.||.||| + .+|+||||||+|||++. +
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCC
Confidence 7899999976 66555543322 3356888999999999999999999 6 89999999999999996 8
Q ss_pred CcEEEEeeccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 538 MRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 538 ~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
+.+||+|||+++....... .....||+.|+|||++.+..
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~ 207 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQ 207 (360)
T ss_dssp TEEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCS
T ss_pred CcEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCC
Confidence 9999999999987654332 23457899999999986543
No 234
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.95 E-value=9.1e-28 Score=240.45 Aligned_cols=174 Identities=22% Similarity=0.325 Sum_probs=144.4
Q ss_pred hhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC--CCcccceeeEEEcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~l 470 (580)
..++|++.+.||+|+||.||+|...+++.||+|++..........+.+.+|++++++++ ||||+++++++...+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34679999999999999999998888999999999876555666788999999999997 5999999999999999999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
||| +.+++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++ +.+||+|||+++.
T Consensus 106 v~e-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 106 VME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEC-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEe-cCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeecccccc
Confidence 999 557899998853 2468889999999999999999998 89999999999999965 8999999999987
Q ss_pred cCCCCCC-ccccccccCCccCccccCC
Q 008026 551 APEGKGS-IETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 551 ~~~~~~~-~~~~~~Gt~~y~APE~~~~ 576 (580)
....... ......||+.|+|||++.+
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~ 202 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKD 202 (313)
T ss_dssp --------------CCGGGCCHHHHTT
T ss_pred ccCccccccccCCCCCCCcCCHHHHhh
Confidence 6443221 1234568999999999876
No 235
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.95 E-value=1.7e-27 Score=260.90 Aligned_cols=178 Identities=22% Similarity=0.333 Sum_probs=144.8
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc----CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCee
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 468 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 468 (580)
..++|++.+.||+|+||.||+|.+. .+..||+|++... ......+.+.+|+.++++++||||+++++++. .+..
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 3467999999999999999999764 2467999988653 23445578999999999999999999999985 4668
Q ss_pred EEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccc
Q 008026 469 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 548 (580)
Q Consensus 469 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 548 (580)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 466 ~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp EEEEECCTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred EEEEEcCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCC
Confidence 999999999999998853 22358899999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCccCccccCCCCC
Q 008026 549 RLAPEGKGSIETRIAGTFGYLAPEYAGNFGS 579 (580)
Q Consensus 549 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 579 (580)
+..............||+.|+|||++.+..+
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 569 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRF 569 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCC
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCC
Confidence 8765443322333457889999999876655
No 236
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.94 E-value=9.9e-28 Score=240.95 Aligned_cols=180 Identities=27% Similarity=0.348 Sum_probs=149.0
Q ss_pred HHHHHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh----hhHHHHHHHHHHHHhcC--CCcccceee
Q 008026 388 QVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVR--HRHLVALLG 460 (580)
Q Consensus 388 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~niv~~~~ 460 (580)
.+.....++|++.+.||+|+||.||+|... +++.||||++....... .....+.+|+.++++++ |+||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 344456678999999999999999999764 78999999997654322 12345678999999996 599999999
Q ss_pred EEEcCCeeEEEEEecCC-CChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec-CCC
Q 008026 461 HCLDGNEKLLVFEYMPQ-GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDM 538 (580)
Q Consensus 461 ~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 538 (580)
++...+..++||||+.+ ++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++ +++
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~ 187 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRG 187 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTT
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCC
Confidence 99999999999999976 899988854 1468899999999999999999998 8999999999999999 788
Q ss_pred cEEEEeeccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 539 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 539 ~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
.+||+|||+++...... .....||+.|+|||++.+.+
T Consensus 188 ~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~ 224 (320)
T 3a99_A 188 ELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHR 224 (320)
T ss_dssp EEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSC
T ss_pred CEEEeeCcccccccccc---ccCCCCCccCCChHHhccCC
Confidence 99999999998765432 23457999999999987554
No 237
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.94 E-value=1.1e-26 Score=244.84 Aligned_cols=176 Identities=22% Similarity=0.353 Sum_probs=146.1
Q ss_pred hhcCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCC-CcccceeeEEEcCCeeEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH-RHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~l 470 (580)
+.++|++.+.||+|+||.||+|+. .+++.||||++..... ..++.+|+++++.++| +++..+..++...+..++
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 347899999999999999999986 4789999998875432 2357889999999986 566666677778888999
Q ss_pred EEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe---cCCCcEEEEeecc
Q 008026 471 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 547 (580)
Q Consensus 471 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~ 547 (580)
||||+ +++|.+++.. ....+++.+++.|+.||+.||+|||+ .+||||||||+|||+ +.++.+||+|||+
T Consensus 81 vme~~-g~sL~~ll~~----~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNF----CSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEECC-CCCHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 99999 8999998853 23468999999999999999999998 899999999999999 5788999999999
Q ss_pred ccccCCCCCC------ccccccccCCccCccccCCCCCC
Q 008026 548 VRLAPEGKGS------IETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 548 a~~~~~~~~~------~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
++........ ......||+.|+|||++.+.+++
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s 191 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQS 191 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCC
Confidence 9876544321 11246799999999999987764
No 238
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.9e-27 Score=263.07 Aligned_cols=167 Identities=23% Similarity=0.369 Sum_probs=142.1
Q ss_pred hcCCcccceeeccCcEEEEEEEEc--CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCe----
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH--DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE---- 467 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 467 (580)
.++|++.+.||+|+||.||+|.+. +++.||||++... ........+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 468999999999999999999875 5899999998653 234455678999999999999999999999987665
Q ss_pred -eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 468 -KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 468 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
.|+||||+++++|.+++. ..+++.+++.++.||+.||+|||+ .+||||||||+|||++.+ .+||+|||
T Consensus 158 ~~~lv~E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEEECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eeEEEEEeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecc
Confidence 699999999999987662 268999999999999999999998 899999999999999875 89999999
Q ss_pred cccccCCCCCCccccccccCCccCccccCCC
Q 008026 547 LVRLAPEGKGSIETRIAGTFGYLAPEYAGNF 577 (580)
Q Consensus 547 ~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 577 (580)
+++..... ....||+.|+|||++.+.
T Consensus 227 ~a~~~~~~-----~~~~gt~~y~aPE~~~~~ 252 (681)
T 2pzi_A 227 AVSRINSF-----GYLYGTPGFQAPEIVRTG 252 (681)
T ss_dssp TCEETTCC-----SCCCCCTTTSCTTHHHHC
T ss_pred cchhcccC-----CccCCCccccCHHHHcCC
Confidence 99876443 335699999999998654
No 239
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.94 E-value=5.6e-27 Score=241.46 Aligned_cols=178 Identities=24% Similarity=0.303 Sum_probs=147.2
Q ss_pred HHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CC-----cccceeeEEE
Q 008026 391 RNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HR-----HLVALLGHCL 463 (580)
Q Consensus 391 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~ 463 (580)
..+.++|++.+.||+|+||.||+|... +++.||||++... .....++.+|+++++.++ |+ +|+++++++.
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 345678999999999999999999765 6889999999752 334567788999988885 55 4999999999
Q ss_pred cCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec--CCCcEE
Q 008026 464 DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG--DDMRAK 541 (580)
Q Consensus 464 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~k 541 (580)
..+..++||||++ ++|.+++.. .....+++..+..++.|++.||.|||+. ..+||||||||+|||++ .++.+|
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~k 201 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRN---TNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK 201 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEE
T ss_pred cCCceEEEEecCC-CCHHHHHhh---cCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEE
Confidence 9999999999996 599988854 2224588999999999999999999952 26899999999999995 477899
Q ss_pred EEeeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 542 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 542 l~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
|+|||+|+..... .....||+.|+|||++.+.+++
T Consensus 202 L~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~ 236 (382)
T 2vx3_A 202 IVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYD 236 (382)
T ss_dssp ECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCC
T ss_pred EEeccCceecccc----cccccCCccccChHHHcCCCCC
Confidence 9999999876432 2335789999999999987764
No 240
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.94 E-value=6.2e-27 Score=234.92 Aligned_cols=172 Identities=24% Similarity=0.392 Sum_probs=136.7
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEE--------
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL-------- 463 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------- 463 (580)
+.++|++.+.||+|+||.||+|... +++.||+|++... .....+++.+|++++++++||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 3468999999999999999999876 5899999998753 3445678899999999999999999999874
Q ss_pred ------cCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec-C
Q 008026 464 ------DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-D 536 (580)
Q Consensus 464 ------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~-~ 536 (580)
.....++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ +
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~ 156 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTE 156 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCC
Confidence 3467899999997 599888732 468899999999999999999998 8999999999999997 5
Q ss_pred CCcEEEEeeccccccCCCCC--CccccccccCCccCccccCC
Q 008026 537 DMRAKVADFGLVRLAPEGKG--SIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 537 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~~Gt~~y~APE~~~~ 576 (580)
++.+||+|||+++....... .......||+.|+|||++.+
T Consensus 157 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 198 (320)
T 2i6l_A 157 DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198 (320)
T ss_dssp TTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHC
T ss_pred CCeEEEccCccccccCCCcccccccccccccccccCcHHhcC
Confidence 67999999999986543211 11233467999999998754
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.94 E-value=9.5e-28 Score=240.19 Aligned_cols=178 Identities=28% Similarity=0.383 Sum_probs=139.7
Q ss_pred HHHhhcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccCh----hhHHHHHHHHHHHHhc----CCCcccceee
Q 008026 390 LRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKV----RHRHLVALLG 460 (580)
Q Consensus 390 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~niv~~~~ 460 (580)
.....++|++.+.||+|+||.||+|+.. +++.||+|++....... .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3455678999999999999999999764 68999999997643221 1233456799999998 8999999999
Q ss_pred EEEcCCeeEEEEEe-cCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEec-CCC
Q 008026 461 HCLDGNEKLLVFEY-MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDM 538 (580)
Q Consensus 461 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 538 (580)
++...+..++|||| +.+++|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+||+++ .++
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTT
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCC
Confidence 99999999999999 7899999988541 358899999999999999999998 7999999999999999 889
Q ss_pred cEEEEeeccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 539 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 539 ~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
.+||+|||+++...... .....||+.|+|||++.+..
T Consensus 178 ~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~ 214 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQ 214 (312)
T ss_dssp EEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSC
T ss_pred eEEEEEcchhhhcccCc---ccccCCcccccCceeeecCC
Confidence 99999999998765432 23456899999999886544
No 242
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=1e-27 Score=269.02 Aligned_cols=250 Identities=25% Similarity=0.291 Sum_probs=183.5
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|+++|.+|..| .++..|+.+++++|.+.+..|..|.++++|++|+|++|.+++.+| .+..+++|++|+|++|++++.
T Consensus 404 n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 481 (768)
T 3rgz_A 404 NGFTGKIPPTL--SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 481 (768)
T ss_dssp SEEEEECCGGG--GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred CccccccCHHH--hcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCc
Confidence 56677777777 456777777777777777777888888888888888888887777 477788888888888888888
Q ss_pred CCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhC----Cc-cccccc
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMG----YP-QRFAEN 154 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~----~~-~~~~~~ 154 (580)
+|..+.++++|+.|+|++|++++.+|. +..+.+|+.|++++|.+....+..+..+..|..+..... .+ ..+...
T Consensus 482 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~ 561 (768)
T 3rgz_A 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTT
T ss_pred CCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcc
Confidence 888888888888888888888877664 677788888888888877554444444433322211100 00 000000
Q ss_pred -------cCC--------C-------------------------------------CCCC-CccceeccCCcEEEEEecC
Q 008026 155 -------WKG--------N-------------------------------------DPCS-DWIGVTCTKGNITVINFQK 181 (580)
Q Consensus 155 -------~~~--------~-------------------------------------~~~~-~~~~~~~~~~~L~~L~ls~ 181 (580)
+.. + +... ..+..+..+.+|+.|||++
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~ 641 (768)
T 3rgz_A 562 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 641 (768)
T ss_dssp TTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCS
T ss_pred cchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcC
Confidence 000 0 0000 0122344567899999999
Q ss_pred CcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCCC----ceeecCCCCCC
Q 008026 182 MNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKSN----AIVNTDGNPDI 253 (580)
Q Consensus 182 n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~~----~~~~~~~n~~~ 253 (580)
|+++|.+|.++++|++|+.|+|++|+++|.+|.+++.+++|+.|||++|+++|.+|..+.. ..+++++|...
T Consensus 642 N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp SCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred CcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 9999999999999999999999999999999999999999999999999999999987653 45888888654
No 243
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.94 E-value=2.4e-27 Score=234.74 Aligned_cols=176 Identities=30% Similarity=0.495 Sum_probs=136.1
Q ss_pred cCCcccceeeccCcEEEEEEEEc--CCc--EEEEEEeecccc-ChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeE
Q 008026 395 NNFSEENILGRGGFGTVYKGELH--DGT--KIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 469 (580)
++|++.+.||+|+||.||+|++. ++. .||+|++..... .....+.+.+|++++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57999999999999999999753 233 689999876433 2345678999999999999999999999998765 88
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 97 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccc
Confidence 9999999999999885421 357899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCC--ccccccccCCccCccccCCCC
Q 008026 550 LAPEGKGS--IETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 550 ~~~~~~~~--~~~~~~Gt~~y~APE~~~~~~ 578 (580)
........ ......||+.|+|||++.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 200 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCE
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCC
Confidence 76543321 112345788999999986543
No 244
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.94 E-value=1.4e-26 Score=235.99 Aligned_cols=174 Identities=26% Similarity=0.385 Sum_probs=145.2
Q ss_pred hhcCCcccceeeccCcEEEEEEEEc-CC-cEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCc------ccceeeEEEc
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELH-DG-TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH------LVALLGHCLD 464 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~ 464 (580)
+.++|++.+.||+|+||.||+|... ++ ..||+|++... ....+.+.+|++++++++|++ ++.+++++..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 3478999999999999999999775 44 78999998642 344567889999999997766 8999999999
Q ss_pred CCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe----------
Q 008026 465 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---------- 534 (580)
Q Consensus 465 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll---------- 534 (580)
.+..++||||+ ++++.+++.. .....+++.++..++.||+.||+|||+ .+|+||||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEEC
T ss_pred CCeEEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccc
Confidence 99999999999 6677776643 233468999999999999999999997 899999999999999
Q ss_pred ---------cCCCcEEEEeeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 535 ---------GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 535 ---------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
+.++.+||+|||+++...... ....||+.|+|||++.+.+++
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~ 217 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWA 217 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCC
T ss_pred ccccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCC
Confidence 567899999999998654322 335799999999999887653
No 245
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.94 E-value=7.5e-27 Score=236.13 Aligned_cols=171 Identities=25% Similarity=0.339 Sum_probs=121.4
Q ss_pred hhcCCccc-ceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc----CC
Q 008026 393 VTNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GN 466 (580)
Q Consensus 393 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~ 466 (580)
+.++|.+. +.||+|+||.||+|... +++.||+|++... . ....+....++.++||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---P---KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 34678885 46999999999999876 7899999998652 1 122223344667789999999999876 44
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC---CCcEEEE
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 543 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 543 (580)
..++||||+++|+|.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQE---RGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHT---C-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred eEEEEEeccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEe
Confidence 57999999999999999854 223468999999999999999999998 89999999999999975 4559999
Q ss_pred eeccccccCCCCCCccccccccCCccCccccCCCC
Q 008026 544 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFG 578 (580)
Q Consensus 544 Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 578 (580)
|||+++...... .....||+.|+|||++.+..
T Consensus 174 Dfg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~ 205 (336)
T 3fhr_A 174 DFGFAKETTQNA---LQTPCYTPYYVAPEVLGPEK 205 (336)
T ss_dssp CCTTCEEC-------------------------CH
T ss_pred ccccceeccccc---cccCCCCcCccChhhhCCCC
Confidence 999998664322 23357899999999986654
No 246
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.94 E-value=7.6e-27 Score=244.32 Aligned_cols=173 Identities=29% Similarity=0.344 Sum_probs=131.7
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 473 (580)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 456667899999999998776678999999998653 235678899999987 79999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCC--CCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCC-------------C
Q 008026 474 YMPQGTLSRHIFNWAEEGL--KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-------------M 538 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~ 538 (580)
|++ |+|.+++........ ...++..++.++.||+.||+|||+ .+|+||||||+|||++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCce
Confidence 996 699999854221110 112334567899999999999998 899999999999999754 4
Q ss_pred cEEEEeeccccccCCCCCC---ccccccccCCccCccccCC
Q 008026 539 RAKVADFGLVRLAPEGKGS---IETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 539 ~~kl~Dfg~a~~~~~~~~~---~~~~~~Gt~~y~APE~~~~ 576 (580)
.+||+|||+++........ ......||+.|+|||++.+
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 206 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE 206 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence 8999999999876544322 1223579999999999976
No 247
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.94 E-value=2e-27 Score=238.64 Aligned_cols=174 Identities=24% Similarity=0.448 Sum_probs=142.4
Q ss_pred hhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 393 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 393 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
..++|++.+.||+|+||.||+|.... .||+|++..........+.+.+|+.++++++||||+++++++...+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35689999999999999999998753 4999998765444444566788999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccccccC
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
||+++++|.+++.. ....+++.++..++.||+.||+|||+ .+|+||||||+||+++ ++.+||+|||+++...
T Consensus 109 e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp BCCCSEEHHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred ecccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 99999999998843 23468899999999999999999998 8999999999999998 6799999999987543
Q ss_pred CCC----CCccccccccCCccCccccCC
Q 008026 553 EGK----GSIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 553 ~~~----~~~~~~~~Gt~~y~APE~~~~ 576 (580)
... ........||+.|+|||++.+
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~ 208 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQ 208 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSC
T ss_pred cccccccccccccCCCcccccChHHhhh
Confidence 211 112223468999999999875
No 248
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.94 E-value=1.2e-26 Score=238.28 Aligned_cols=172 Identities=25% Similarity=0.335 Sum_probs=143.4
Q ss_pred cCCcccceeeccCcEEEEEEEE-cCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-----------CCcccceeeEE
Q 008026 395 NNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-----------HRHLVALLGHC 462 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~ 462 (580)
++|++.+.||+|+||.||+|+. .+++.||||++... ......+.+|++++++++ ||||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 5799999999999999999976 47899999998752 334567889999999886 88999999998
Q ss_pred EcCC----eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCC-CcEecCCCCCCeEec--
Q 008026 463 LDGN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLG-- 535 (580)
Q Consensus 463 ~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~-~ivH~Dlkp~NIll~-- 535 (580)
...+ ..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+ + +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEE
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEecc
Confidence 8654 689999999 88999988542 22458899999999999999999998 6 999999999999994
Q ss_pred ----CCCcEEEEeeccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 536 ----DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 536 ----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
..+.+||+|||+++..... .....||+.|+|||++.+..++
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~ 213 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWG 213 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCC
T ss_pred CCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCC
Confidence 3447999999999876432 2234789999999999877653
No 249
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.94 E-value=5.6e-27 Score=252.65 Aligned_cols=178 Identities=29% Similarity=0.443 Sum_probs=148.2
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEc------CCe
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------GNE 467 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~ 467 (580)
++|++.+.||+|+||.||+|... +++.||||++... ......+.+.+|++++++++||||+++++++.. .+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 68999999999999999999764 6899999998763 345556789999999999999999999998765 667
Q ss_pred eEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCc---EEEEe
Q 008026 468 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVAD 544 (580)
Q Consensus 468 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~D 544 (580)
.++||||+++++|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred EEEEEEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcc
Confidence 899999999999999885421 22358888999999999999999998 89999999999999997664 99999
Q ss_pred eccccccCCCCCCccccccccCCccCccccCCCCCC
Q 008026 545 FGLVRLAPEGKGSIETRIAGTFGYLAPEYAGNFGSS 580 (580)
Q Consensus 545 fg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 580 (580)
||.++...... ......||+.|+|||++.+..++
T Consensus 168 FG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s 201 (676)
T 3qa8_A 168 LGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYT 201 (676)
T ss_dssp CCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCS
T ss_pred ccccccccccc--ccccccCCcccCChHHhccCCCC
Confidence 99998765433 22346799999999999887653
No 250
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.94 E-value=1.9e-26 Score=231.20 Aligned_cols=172 Identities=26% Similarity=0.365 Sum_probs=127.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 472 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467999999999999999999875 7899999999865433333344555566788889999999999999999999999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCC-CcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
||+ ++.+..+... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 104 e~~-~~~~~~l~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR----MQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp CCC-SEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred ecc-CCcHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 999 4455444322 12468899999999999999999997 4 8999999999999999999999999999765
Q ss_pred CCCCCCccccccccCCccCccccC
Q 008026 552 PEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 552 ~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
.... ......||+.|+|||++.
T Consensus 176 ~~~~--~~~~~~~~~~y~aPE~~~ 197 (318)
T 2dyl_A 176 VDDK--AKDRSAGCAAYMAPERID 197 (318)
T ss_dssp -------------CCTTCCHHHHC
T ss_pred cCCc--cccccCCCccccChhhcc
Confidence 4432 223356899999999985
No 251
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=240.85 Aligned_cols=169 Identities=26% Similarity=0.414 Sum_probs=132.9
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhc-CCCcccceeeEEEcCCeeEEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVFE 473 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 473 (580)
.+|.+.+.||+|+||+||.....+++.||||++..... ..+.+|+++++.+ +||||+++++++.+....|+|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 35888999999999997766566799999999865332 2356899999999 79999999999999999999999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC-----CCcEEEEeeccc
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-----DMRAKVADFGLV 548 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~Dfg~a 548 (580)
|++ |+|.+++.. ......+..+..++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+|
T Consensus 99 ~~~-g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 99 LCA-ATLQEYVEQ----KDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp CCS-EEHHHHHHS----SSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred CCC-CCHHHHHHh----cCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 996 599888843 22234445677899999999999998 89999999999999953 235889999999
Q ss_pred cccCCCCC--CccccccccCCccCccccCC
Q 008026 549 RLAPEGKG--SIETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 549 ~~~~~~~~--~~~~~~~Gt~~y~APE~~~~ 576 (580)
+....... .......||+.|+|||++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~ 200 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSE 200 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSC
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhc
Confidence 87654321 12234679999999999974
No 252
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.93 E-value=1.2e-25 Score=237.29 Aligned_cols=130 Identities=19% Similarity=0.123 Sum_probs=100.9
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCC-chhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGG-IDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTG 79 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~ 79 (580)
|++.+..|..| .+++.|+.+++++|.+.... +..|.++++|++|+|++|++++..| .|.++++|++|+|++|++++
T Consensus 40 n~i~~~~~~~~--~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 117 (455)
T 3v47_A 40 NSIAELNETSF--SRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDG 117 (455)
T ss_dssp SCCCEECTTTT--SSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBT
T ss_pred CccCcCChhHh--ccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCc
Confidence 66777777778 56777888888888766444 4678888888888888888888766 57888888888888888886
Q ss_pred cCCcc--ccCCCCCcEEEccCCcccccCCC--CCcccccccccccCCCCCCCCCCCch
Q 008026 80 PVPDS--LVKLESLKIVNMTNNLLQGPVPE--FDRSVSLDMAKGSNNFCLPSPGACDP 133 (580)
Q Consensus 80 ~~P~~--~~~l~~L~~L~L~~N~l~~~~~~--~~~~~~L~~l~l~~n~~~~~~~~~~~ 133 (580)
.+|.. |..+++|++|+|++|++++..|. +..+.+|+.|++++|.+..+++..+.
T Consensus 118 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 175 (455)
T 3v47_A 118 AVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLL 175 (455)
T ss_dssp HHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSG
T ss_pred cccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhh
Confidence 56655 88888888888888888888665 67788888888888888777655443
No 253
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=2.7e-26 Score=231.00 Aligned_cols=209 Identities=17% Similarity=0.147 Sum_probs=142.4
Q ss_pred ceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEcc
Q 008026 18 QSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMT 97 (580)
Q Consensus 18 ~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~ 97 (580)
..++.+++++|.+. .+|..+.++++|++|+|++|.|+..+..+..+++|++|+|++|+++ .+|..|+++++|+.|+|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 33444455555433 5566666677777777777777733224666777777777777777 667777777777777777
Q ss_pred CCcccccCCC-CC---------cccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccce
Q 008026 98 NNLLQGPVPE-FD---------RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGV 167 (580)
Q Consensus 98 ~N~l~~~~~~-~~---------~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (580)
+|++.+.+|. +. .+.+|+.|++++|.+..+|.. +. .+..+....+.++....++..
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~-l~-------------~l~~L~~L~L~~N~l~~l~~~ 224 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPAS-IA-------------NLQNLKSLKIRNSPLSALGPA 224 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGG-GG-------------GCTTCCEEEEESSCCCCCCGG
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHh-hc-------------CCCCCCEEEccCCCCCcCchh
Confidence 7666655553 32 266677777777766655432 11 112223333344444455555
Q ss_pred eccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCCC
Q 008026 168 TCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKSN 242 (580)
Q Consensus 168 ~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~~ 242 (580)
+..+++|+.|+|++|++.+.+|..++.+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..
T Consensus 225 l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 225 IHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp GGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred hccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 666778899999998888888888889999999999998888888988888999999999999998888877543
No 254
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=5.3e-27 Score=234.66 Aligned_cols=217 Identities=22% Similarity=0.312 Sum_probs=187.1
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++.+|..| .++..|+.+++++|.+.+..|..|.++++|++|+|++|.|++.+| .|..+++|++|+|++|++++.
T Consensus 87 n~l~~~~p~~l--~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 164 (313)
T 1ogq_A 87 NNLVGPIPPAI--AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGA 164 (313)
T ss_dssp TTEESCCCGGG--GGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEE
T ss_pred CcccccCChhH--hcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCc
Confidence 78899999999 668888888998998888899999999999999999999998888 588999999999999999999
Q ss_pred CCccccCCC-CCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCC
Q 008026 81 VPDSLVKLE-SLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGN 158 (580)
Q Consensus 81 ~P~~~~~l~-~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 158 (580)
+|..+++++ +|+.|+|++|++++.+|. +..+. |+.|++++|.+...++..+. .+..+....+.+
T Consensus 165 ~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~-------------~l~~L~~L~L~~ 230 (313)
T 1ogq_A 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFG-------------SDKNTQKIHLAK 230 (313)
T ss_dssp CCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCC-------------TTSCCSEEECCS
T ss_pred CCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHh-------------cCCCCCEEECCC
Confidence 999999998 999999999999987775 55555 99999999998876554433 233444455555
Q ss_pred CCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCc-cccc
Q 008026 159 DPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQ-LYGK 235 (580)
Q Consensus 159 ~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~-l~g~ 235 (580)
+.....+..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|+++|.+|.. ..+++|+.+++++|+ +.|.
T Consensus 231 N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 231 NSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp SEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred CceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 555544444666789999999999999999999999999999999999999999986 899999999999998 6664
No 255
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.93 E-value=1.8e-25 Score=235.56 Aligned_cols=235 Identities=16% Similarity=0.102 Sum_probs=192.0
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCcc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 84 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~ 84 (580)
..+|..+. ..|+.+++++|++....++.|.++++|++|+|++|.|++..| .|.++++|++|+|++|+|++..+..
T Consensus 67 ~~iP~~~~----~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 142 (452)
T 3zyi_A 67 SEVPQGIP----SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGA 142 (452)
T ss_dssp SSCCSCCC----TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTT
T ss_pred CccCCCCC----CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhh
Confidence 45787773 455666777788877778899999999999999999998877 5889999999999999999444445
Q ss_pred ccCCCCCcEEEccCCcccccCCC-CCcccccccccccC-CCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCC
Q 008026 85 LVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSN-NFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS 162 (580)
Q Consensus 85 ~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~-n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (580)
|.++++|++|+|++|+++.+++. |..+.+|+.|++++ |.+..++...+..+. .+....+.++...
T Consensus 143 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~-------------~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 143 FEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLF-------------NLKYLNLGMCNIK 209 (452)
T ss_dssp SSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCT-------------TCCEEECTTSCCS
T ss_pred hcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCC-------------CCCEEECCCCccc
Confidence 99999999999999999988874 78899999999998 566666665554333 3334444555555
Q ss_pred CccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC-
Q 008026 163 DWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS- 241 (580)
Q Consensus 163 ~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~- 241 (580)
.++ .+..+.+|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+.
T Consensus 210 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 210 DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 544 355677999999999999998899999999999999999999988899999999999999999999977766543
Q ss_pred ---CceeecCCCCCCCCCCC
Q 008026 242 ---NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 242 ---~~~~~~~~n~~~c~~~~ 258 (580)
...+++++|||.|+|..
T Consensus 289 l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CTTCCEEECCSSCEECSTTT
T ss_pred ccCCCEEEccCCCcCCCCCc
Confidence 34689999999999864
No 256
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=2.1e-25 Score=234.21 Aligned_cols=234 Identities=16% Similarity=0.132 Sum_probs=186.0
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCc-
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPD- 83 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~- 83 (580)
..+|..+. ..|+.+++++|++....+..|.++++|++|+|++|.|++..+ .|.++++|++|+|++|+|+ .+|.
T Consensus 56 ~~iP~~~~----~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~ 130 (440)
T 3zyj_A 56 REVPDGIS----TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNG 130 (440)
T ss_dssp SSCCSCCC----TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCS-SCCTT
T ss_pred CcCCCCCC----CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCC-eeCHh
Confidence 46777773 345556677777777667888889999999999999887776 5888899999999999988 4554
Q ss_pred cccCCCCCcEEEccCCcccccCCC-CCcccccccccccC-CCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCC
Q 008026 84 SLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSN-NFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPC 161 (580)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~-n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (580)
.|..+++|+.|+|++|+++.+++. |..+.+|+.|++++ |.+..++...+..+ ..+....+.++..
T Consensus 131 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l-------------~~L~~L~L~~n~l 197 (440)
T 3zyj_A 131 AFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL-------------SNLRYLNLAMCNL 197 (440)
T ss_dssp TSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC-------------SSCCEEECTTSCC
T ss_pred HhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcc-------------cccCeecCCCCcC
Confidence 588899999999999998887774 77888888888887 45555665544333 3344444555555
Q ss_pred CCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC
Q 008026 162 SDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS 241 (580)
Q Consensus 162 ~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~ 241 (580)
..++. +..+.+|+.|+|++|++++..|..|.++++|+.|+|++|++.+..|..+..+++|+.|+|++|++++..+..+.
T Consensus 198 ~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 198 REIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp SSCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred ccccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 55543 55667999999999999988899999999999999999999988899999999999999999999977776543
Q ss_pred ----CceeecCCCCCCCCCCC
Q 008026 242 ----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 242 ----~~~~~~~~n~~~c~~~~ 258 (580)
...+++++|||.|+|..
T Consensus 277 ~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 277 PLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp SCTTCCEEECCSSCEECSSTT
T ss_pred cccCCCEEEcCCCCccCCCCc
Confidence 34689999999999864
No 257
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.93 E-value=1.8e-26 Score=244.98 Aligned_cols=255 Identities=17% Similarity=0.062 Sum_probs=183.5
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++..|..| .++..|+.+++++|.+.+..|..|.++++|++|+|++|++++.++. |.++++|++|+|++|++.+.
T Consensus 42 n~l~~~~~~~~--~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~ 119 (477)
T 2id5_A 42 NRIKTLNQDEF--ASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVIL 119 (477)
T ss_dssp SCCCEECTTTT--TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEE
T ss_pred CccceECHhHc--cCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccC
Confidence 56666666777 5577777777777877777677888888888888888888876664 67788888888888888866
Q ss_pred CCccccCCCCCcEEEccCCcccccCC-CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhC-----------Cc
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMG-----------YP 148 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~-----------~~ 148 (580)
.|..|.++++|+.|+|++|.+++..+ .|..+.+|+.|++++|.+..+++..+..+..|..+..... .+
T Consensus 120 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l 199 (477)
T 2id5_A 120 LDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRL 199 (477)
T ss_dssp CTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSC
T ss_pred ChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccC
Confidence 67778888888888888888887766 4777778888888888777666433322222211110000 00
Q ss_pred c------------------------ccccccCCCCCCCCcc-ceeccCCcEEEEEecCCcccccCcccccCCCCCcEEec
Q 008026 149 Q------------------------RFAENWKGNDPCSDWI-GVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLIL 203 (580)
Q Consensus 149 ~------------------------~~~~~~~~~~~~~~~~-~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l 203 (580)
. .+....+.++....++ ..+..+++|+.|+|++|++.+..+..|..+++|++|+|
T Consensus 200 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (477)
T 2id5_A 200 YRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQL 279 (477)
T ss_dssp TTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEEC
T ss_pred cccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEEC
Confidence 0 1111112223333333 24556678999999999999777778899999999999
Q ss_pred cCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC----CceeecCCCCCCCCCCC
Q 008026 204 ADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 204 s~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~c~~~~ 258 (580)
++|++.+..|..+..+++|+.|+|++|++++..+..+. ...+++++|+|.|.|..
T Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 280 VGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp CSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred CCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 99999988899999999999999999999976665543 34689999999999864
No 258
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=3.4e-26 Score=244.73 Aligned_cols=160 Identities=19% Similarity=0.214 Sum_probs=124.0
Q ss_pred cccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChh------hHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 398 SEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGK------GLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 398 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
...+.||+|+||.||+|.. .+..+++|+...+..... ..+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999954 478899998755433221 235589999999999999999766666677788999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
|||+++++|.+++.. +..++.|++.||+|||+ ++|+||||||+|||+++ .+||+|||+|+..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999998832 45789999999999998 89999999999999998 9999999999987
Q ss_pred CCCCCCc------cccccccCCccCccccCC
Q 008026 552 PEGKGSI------ETRIAGTFGYLAPEYAGN 576 (580)
Q Consensus 552 ~~~~~~~------~~~~~Gt~~y~APE~~~~ 576 (580)
....... .....||+.|||||++.+
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~ 510 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWER 510 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence 5432111 235689999999999865
No 259
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.92 E-value=2.6e-25 Score=219.40 Aligned_cols=213 Identities=22% Similarity=0.254 Sum_probs=177.5
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCc-ccccCCc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNF-FTGPVPD 83 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~-l~~~~P~ 83 (580)
..+|..+. ..|+.+++++|.+....+..|.++++|++|+|++|.+++..| .|.++++|++|+|++|+ +....|.
T Consensus 24 ~~ip~~~~----~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~ 99 (285)
T 1ozn_A 24 QAVPVGIP----AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPA 99 (285)
T ss_dssp SSCCTTCC----TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTT
T ss_pred ccCCcCCC----CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHH
Confidence 45676662 455666677777777666789999999999999999998877 58889999999999997 7744477
Q ss_pred cccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCC
Q 008026 84 SLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS 162 (580)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (580)
.|..+++|+.|+|++|++++.+|. +..+.+|+.|++++|.+..+++..+.
T Consensus 100 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----------------------------- 150 (285)
T 1ozn_A 100 TFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR----------------------------- 150 (285)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT-----------------------------
T ss_pred HhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc-----------------------------
Confidence 899999999999999999998775 77889999999999998877755332
Q ss_pred CccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCC--
Q 008026 163 DWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFK-- 240 (580)
Q Consensus 163 ~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~-- 240 (580)
.+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..|..+
T Consensus 151 -------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 223 (285)
T 1ozn_A 151 -------DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223 (285)
T ss_dssp -------TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTT
T ss_pred -------cCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHccc
Confidence 23489999999999996666679999999999999999998889999999999999999999998665432
Q ss_pred --CCceeecCCCCCCCCCCC
Q 008026 241 --SNAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 241 --~~~~~~~~~n~~~c~~~~ 258 (580)
....+++++|++.|.|..
T Consensus 224 l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 224 LRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp CTTCCEEECCSSCEECSGGG
T ss_pred CcccCEEeccCCCccCCCCc
Confidence 345689999999998754
No 260
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.92 E-value=1.3e-24 Score=214.31 Aligned_cols=145 Identities=12% Similarity=0.040 Sum_probs=127.7
Q ss_pred hcCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccccC-hhhHHHHHHHHHHHHhcCCCcccceeeEEEcCCeeEEE
Q 008026 394 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 394 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|+..+++++||||+++++++...+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999875 5899999999865433 34557899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecCCCcEEEEeeccc
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 548 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 548 (580)
|||+++++|.+++.. . ....++.+++.|++.||+|||+ .+|+||||||+|||++.++.+||+++|..
T Consensus 110 ~e~~~g~~L~~~l~~------~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~~~ 176 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT------S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPATM 176 (286)
T ss_dssp EECCCEEEHHHHHTT------C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCCCC
T ss_pred EEecCCCCHHHHHhc------C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecccc
Confidence 999999999998832 1 2445688899999999999998 89999999999999999999999987754
No 261
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.91 E-value=4.3e-25 Score=220.22 Aligned_cols=235 Identities=18% Similarity=0.111 Sum_probs=188.4
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCC--C-CCCCCCCCcEEeccCCcccccCC
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL--P-DFSGVKQLESLSLRDNFFTGPVP 82 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p-~~~~l~~L~~L~L~~N~l~~~~P 82 (580)
..+|..+. ..|+.+++++|++....+..|.++++|++|+|++|.++... | .+..+++|++|+|++|++. .+|
T Consensus 20 ~~ip~~~~----~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~ 94 (306)
T 2z66_A 20 TSVPTGIP----SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMS 94 (306)
T ss_dssp SSCCSCCC----TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEE
T ss_pred ccCCCCCC----CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cCh
Confidence 45777663 34556667777666544456899999999999999998542 3 5667899999999999999 789
Q ss_pred ccccCCCCCcEEEccCCcccccCC--CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCC
Q 008026 83 DSLVKLESLKIVNMTNNLLQGPVP--EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDP 160 (580)
Q Consensus 83 ~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (580)
..+..+++|+.|+|++|++++.++ .+..+.+|+.|++++|.+...++..+..+. .+....+.++.
T Consensus 95 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-------------~L~~L~l~~n~ 161 (306)
T 2z66_A 95 SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS-------------SLEVLKMAGNS 161 (306)
T ss_dssp EEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCT-------------TCCEEECTTCE
T ss_pred hhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCc-------------CCCEEECCCCc
Confidence 899999999999999999999876 588899999999999998877766554333 33333444444
Q ss_pred CCC--ccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCC
Q 008026 161 CSD--WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS 238 (580)
Q Consensus 161 ~~~--~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~ 238 (580)
... .+..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..+..+..+++|++||+++|++++.+|.
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHH
Confidence 432 455666778999999999999988899999999999999999999966666899999999999999999998887
Q ss_pred CCC-----CceeecCCCCCCCCCCC
Q 008026 239 FKS-----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 239 ~~~-----~~~~~~~~n~~~c~~~~ 258 (580)
.+. ...+++++|++.|.|..
T Consensus 242 ~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 242 ELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp SCCCCCTTCCEEECTTCCEECSGGG
T ss_pred HHHhhhccCCEEEccCCCeecccCh
Confidence 643 34588999999998753
No 262
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.91 E-value=4.4e-25 Score=250.22 Aligned_cols=91 Identities=23% Similarity=0.262 Sum_probs=76.9
Q ss_pred eeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCCC-cee
Q 008026 167 VTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKSN-AIV 245 (580)
Q Consensus 167 ~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~~-~~~ 245 (580)
.+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|..+.. ..+
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l 552 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVL 552 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEE
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEE
Confidence 345567899999999999988888899999999999999999965555554 89999999999999999987653 468
Q ss_pred ecCCCCCCCCCCCC
Q 008026 246 NTDGNPDIGKEKSS 259 (580)
Q Consensus 246 ~~~~n~~~c~~~~~ 259 (580)
++++|||.|+|...
T Consensus 553 ~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 553 DITHNKFICECELS 566 (844)
T ss_dssp EEEEECCCCSSSCC
T ss_pred EecCCCcccccccH
Confidence 99999999998753
No 263
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.91 E-value=1.2e-24 Score=238.70 Aligned_cols=241 Identities=15% Similarity=0.099 Sum_probs=131.8
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCccc-CceEecccCcCcCCCCCCCCC--CCCcEEeccCCccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTS-LKEIWLHSNAFSGPLPDFSGV--KQLESLSLRDNFFT 78 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~l--~~L~~L~L~~N~l~ 78 (580)
|+++|.+| .| .++..|+.+++++|.+. .+|..+.++++ |++|+|++|.++..+..+..+ ++|+.|+|++|++.
T Consensus 340 N~l~g~ip-~~--~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~ 415 (636)
T 4eco_A 340 NQLEGKLP-AF--GSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIG 415 (636)
T ss_dssp CCCEEECC-CC--EEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTT
T ss_pred CcCccchh-hh--CCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCC
Confidence 44444555 44 33444555555555333 44444555555 555555555555222233332 25555555555555
Q ss_pred ccCCcccc-------CCCCCcEEEccCCcccccCCCC-CcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccc
Q 008026 79 GPVPDSLV-------KLESLKIVNMTNNLLQGPVPEF-DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQR 150 (580)
Q Consensus 79 ~~~P~~~~-------~l~~L~~L~L~~N~l~~~~~~~-~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 150 (580)
+.+|..|. .+++|+.|+|++|+++.+++.+ ..+.+|+.|++++|.+..+|...+.... .....+..
T Consensus 416 ~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~------~~~~~l~~ 489 (636)
T 4eco_A 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDEN------ENFKNTYL 489 (636)
T ss_dssp TTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETT------EECTTGGG
T ss_pred CcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccc------ccccccCC
Confidence 55555554 4555555555555555444432 2345555555555555555544332110 00001113
Q ss_pred cccccCCCCCCCCccceec--cCCcEEEEEecCCcccccCcccccCCCCCcEEec------cCCcccccCCccCcCCCCC
Q 008026 151 FAENWKGNDPCSDWIGVTC--TKGNITVINFQKMNLTGTISPEFASFKSLQRLIL------ADNNLSGMIPEGLSVLGAL 222 (580)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~--~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l------s~N~l~g~~p~~l~~l~~L 222 (580)
+....+.++....+|..+. .+++|+.|+|++|++++ +|..++++++|+.|+| ++|++.+.+|.++..+++|
T Consensus 490 L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L 568 (636)
T 4eco_A 490 LTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSL 568 (636)
T ss_dssp CCEEECCSSCCCBCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred ccEEECcCCcCCccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCC
Confidence 3444455555555666555 66777777777777775 7777777777777777 4566677777777777777
Q ss_pred CEEEccCCcccccCCCCCC--CceeecCCCCCCC
Q 008026 223 KELDVSNNQLYGKIPSFKS--NAIVNTDGNPDIG 254 (580)
Q Consensus 223 ~~l~ls~N~l~g~~p~~~~--~~~~~~~~n~~~c 254 (580)
++|+|++|++ +.+|..+. ...+++++|++.|
T Consensus 569 ~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 569 TQLQIGSNDI-RKVNEKITPNISVLDIKDNPNIS 601 (636)
T ss_dssp CEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCE
T ss_pred CEEECCCCcC-CccCHhHhCcCCEEECcCCCCcc
Confidence 7777777777 56665443 2346677777665
No 264
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.91 E-value=8e-25 Score=227.42 Aligned_cols=171 Identities=19% Similarity=0.225 Sum_probs=127.4
Q ss_pred cCCcccceeeccCcEEEEEEEEc-CCcEEEEEEeeccc-cChhhHHHHHHHHHHHHhcCC-Ccccce---------e---
Q 008026 395 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGV-ISGKGLTEFKSEIAVLTKVRH-RHLVAL---------L--- 459 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h-~niv~~---------~--- 459 (580)
..|...+.||+|+||.||+|++. +|+.||||++.... ......+.+.+|+.+++.++| ++.... .
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45778899999999999999854 79999999987432 223346789999999999987 221111 1
Q ss_pred ---------eEEEc-----CCeeEEEEEecCCCChhHHHHHHhh--hCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 008026 460 ---------GHCLD-----GNEKLLVFEYMPQGTLSRHIFNWAE--EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFI 523 (580)
Q Consensus 460 ---------~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~iv 523 (580)
.++.. ....+++|+++ +++|.+++..... .....+++..++.++.||+.||+|||+ ++||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 11111 12356777765 6799988854321 123457888999999999999999998 8999
Q ss_pred ecCCCCCCeEecCCCcEEEEeeccccccCCCCCCccccccccCCccCcccc
Q 008026 524 HRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 574 (580)
Q Consensus 524 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~ 574 (580)
||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~ 279 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETT 279 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhh
Confidence 9999999999999999999999998865432 334568 999999998
No 265
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.91 E-value=1.1e-23 Score=209.18 Aligned_cols=147 Identities=22% Similarity=0.369 Sum_probs=126.4
Q ss_pred hcCCccc-ceeeccCcEEEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHH-HhcCCCcccceeeEEEc----CC
Q 008026 394 TNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVL-TKVRHRHLVALLGHCLD----GN 466 (580)
Q Consensus 394 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~ 466 (580)
.++|.+. +.||+|+||.||+|... +++.||+|++... ..+.+|++++ +..+||||+++++++.. ..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 3567776 78999999999999774 7899999998642 4567888887 55589999999999876 66
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEecC---CCcEEEE
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 543 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 543 (580)
..++||||+++++|.+++.. .....+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred eEEEEEeecCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEe
Confidence 78999999999999999854 223468999999999999999999998 89999999999999997 7889999
Q ss_pred eeccccccCC
Q 008026 544 DFGLVRLAPE 553 (580)
Q Consensus 544 Dfg~a~~~~~ 553 (580)
|||++.....
T Consensus 163 Dfg~a~~~~~ 172 (299)
T 3m2w_A 163 DFGFAKETTG 172 (299)
T ss_dssp CCTTCEECTT
T ss_pred cccccccccc
Confidence 9999986654
No 266
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=4.6e-24 Score=209.43 Aligned_cols=212 Identities=15% Similarity=0.058 Sum_probs=172.8
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCcc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 84 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~ 84 (580)
..+|..+. ..|+.+++++|++....+..|.++++|++|+|++|.+++..+ .|.++++|++|+|++|++++..|..
T Consensus 20 ~~ip~~l~----~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (276)
T 2z62_A 20 YKIPDNLP----FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGA 95 (276)
T ss_dssp SSCCSSSC----TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred cccCCCCC----CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhh
Confidence 35777773 345666777777776666789999999999999999998777 5888999999999999999666678
Q ss_pred ccCCCCCcEEEccCCcccccCC-CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCC
Q 008026 85 LVKLESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD 163 (580)
Q Consensus 85 ~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (580)
|.++++|+.|++++|++++.++ .+..+.+|+.|++++|.+..+.
T Consensus 96 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~----------------------------------- 140 (276)
T 2z62_A 96 FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK----------------------------------- 140 (276)
T ss_dssp TTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC-----------------------------------
T ss_pred hcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceec-----------------------------------
Confidence 9999999999999999999887 5889999999999999887642
Q ss_pred ccceeccCCcEEEEEecCCcccccCcccccCCCCCc----EEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCC
Q 008026 164 WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQ----RLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSF 239 (580)
Q Consensus 164 ~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~----~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~ 239 (580)
++..+..+++|+.|++++|++++..+..+..+++|+ .|++++|++. .+|.......+|+.|++++|++++..+..
T Consensus 141 l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 219 (276)
T 2z62_A 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLKSVPDGI 219 (276)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCC-EECTTSSCSCCEEEEECCSSCCSCCCTTT
T ss_pred CchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCccc-ccCccccCCCcccEEECCCCceeecCHhH
Confidence 112233456999999999999987778888777777 9999999999 55555556668999999999999776655
Q ss_pred CC----CceeecCCCCCCCCCC
Q 008026 240 KS----NAIVNTDGNPDIGKEK 257 (580)
Q Consensus 240 ~~----~~~~~~~~n~~~c~~~ 257 (580)
+. ...+++++|++.|.|+
T Consensus 220 ~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 220 FDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp TTTCCSCCEEECCSSCBCCCTT
T ss_pred hcccccccEEEccCCcccccCC
Confidence 43 3468999999999875
No 267
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.91 E-value=1.7e-23 Score=210.94 Aligned_cols=214 Identities=15% Similarity=0.144 Sum_probs=102.4
Q ss_pred EEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccC
Q 008026 20 LWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTN 98 (580)
Q Consensus 20 L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~ 98 (580)
|+.+++++|++.+..+..|.++++|++|+|++|.+++..| .|..+++|++|+|++|+++ .+|..+. ++|+.|++++
T Consensus 54 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~ 130 (330)
T 1xku_A 54 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHE 130 (330)
T ss_dssp CCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCS
T ss_pred CeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCC
Confidence 3444555555544444456666666666666666666544 3566666666666666666 5555443 4555555555
Q ss_pred CcccccCCC-CCcccccccccccCCCCCC--CCCCCchhHHHHHHHHHhhC--------CccccccccCCCCCCCCc-cc
Q 008026 99 NLLQGPVPE-FDRSVSLDMAKGSNNFCLP--SPGACDPRLNALLSVVKLMG--------YPQRFAENWKGNDPCSDW-IG 166 (580)
Q Consensus 99 N~l~~~~~~-~~~~~~L~~l~l~~n~~~~--~~~~~~~~l~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~ 166 (580)
|++++.++. +..+.+|+.|++++|.+.. ..+..+..+..|..+..... ....+....+.++..... +.
T Consensus 131 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~ 210 (330)
T 1xku_A 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAA 210 (330)
T ss_dssp SCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTG
T ss_pred CcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccCHH
Confidence 555554443 4444555555555554432 12221111111110000000 001112222223333222 23
Q ss_pred eeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 167 VTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 167 ~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
.+..+++|+.|+|++|++++..|..+..+++|++|+|++|++. .+|..+..+++|++|++++|++++..+
T Consensus 211 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 211 SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp GGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred HhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 3444455555555555555444445555555555555555555 555555555555555555555554433
No 268
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.91 E-value=2.1e-23 Score=210.57 Aligned_cols=230 Identities=16% Similarity=0.133 Sum_probs=136.8
Q ss_pred ccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCC
Q 008026 3 QLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVP 82 (580)
Q Consensus 3 ~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P 82 (580)
++.+..|..| .++..|+.+++++|++....|..|.++++|++|+|++|.++..++.+. ++|++|+|++|++.+..+
T Consensus 65 ~i~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~ 140 (332)
T 2ft3_A 65 DISELRKDDF--KGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPK 140 (332)
T ss_dssp CCCEECTTTT--TTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCS
T ss_pred cCCccCHhHh--hCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc--ccCCEEECCCCccCccCH
Confidence 3333334444 334445555555554444444555555555555555555553333322 455555555555552222
Q ss_pred ccccCCCCCcEEEccCCcccc--cCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCC
Q 008026 83 DSLVKLESLKIVNMTNNLLQG--PVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGND 159 (580)
Q Consensus 83 ~~~~~l~~L~~L~L~~N~l~~--~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 159 (580)
..|.++++|+.|+|++|.++. ..+. +..+ +|+.|++++|.+..+|...+ ..+....+.++
T Consensus 141 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~----------------~~L~~L~l~~n 203 (332)
T 2ft3_A 141 GVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP----------------ETLNELHLDHN 203 (332)
T ss_dssp GGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC----------------SSCSCCBCCSS
T ss_pred hHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc----------------CCCCEEECCCC
Confidence 235555556666666555542 3332 3333 55566666666555554332 12333444455
Q ss_pred CCCCcc-ceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCC
Q 008026 160 PCSDWI-GVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS 238 (580)
Q Consensus 160 ~~~~~~-~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~ 238 (580)
.....+ ..+..+++|+.|+|++|++.+..|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+.
T Consensus 204 ~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~ 282 (332)
T 2ft3_A 204 KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVN 282 (332)
T ss_dssp CCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTT
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChh
Confidence 544433 45666778888888888888777778888888888888888888 8888888888888899988888866554
Q ss_pred CCCC----------ceeecCCCCCCC
Q 008026 239 FKSN----------AIVNTDGNPDIG 254 (580)
Q Consensus 239 ~~~~----------~~~~~~~n~~~c 254 (580)
.+.. ..+.+.+||+.+
T Consensus 283 ~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 283 DFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp SSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred HccccccccccccccceEeecCcccc
Confidence 4321 246777888764
No 269
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.91 E-value=4.4e-24 Score=210.61 Aligned_cols=198 Identities=20% Similarity=0.181 Sum_probs=172.6
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCc-CcCCCC-CCCCCCCCcEEeccCCcccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA-FSGPLP-DFSGVKQLESLSLRDNFFTG 79 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~L~~N~l~~ 79 (580)
|++++..|..| .++..|+.+++++|.+.+..|..|.++++|++|+|++|. ++...| .|..+++|++|+|++|++.+
T Consensus 42 n~i~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 119 (285)
T 1ozn_A 42 NRISHVPAASF--RACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE 119 (285)
T ss_dssp SCCCEECTTTT--TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCC
T ss_pred CcCCccCHHHc--ccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCE
Confidence 56666556678 568888888999998887778899999999999999998 887766 58899999999999999997
Q ss_pred cCCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCC
Q 008026 80 PVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGN 158 (580)
Q Consensus 80 ~~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 158 (580)
..|..|.++++|++|+|++|++++.++. +..+.+|+.|++++|.+..+++..+.
T Consensus 120 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------------------------- 174 (285)
T 1ozn_A 120 LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR------------------------- 174 (285)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTT-------------------------
T ss_pred ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhc-------------------------
Confidence 6678899999999999999999998886 78899999999999998877654332
Q ss_pred CCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 159 DPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 159 ~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
.+++|+.|++++|++.+..|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++....+
T Consensus 175 -----------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 175 -----------GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp -----------TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred -----------CccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 23489999999999999889999999999999999999996555679999999999999999986544
No 270
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.90 E-value=2.5e-24 Score=216.60 Aligned_cols=214 Identities=14% Similarity=0.077 Sum_probs=180.7
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccC
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPV 81 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 81 (580)
|++. .+|..+ .++..|+.+++++|.+. .+|..|.++++|++|+|++|.|+..++.+.++++|++|+|++|++.+.+
T Consensus 91 n~l~-~lp~~l--~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~ 166 (328)
T 4fcg_A 91 VPLP-QFPDQA--FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTEL 166 (328)
T ss_dssp SCCS-SCCSCG--GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCC
T ss_pred CCch-hcChhh--hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCcccc
Confidence 4554 889888 45888888888888766 7888999999999999999999954446899999999999999988899
Q ss_pred CccccC---------CCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccc
Q 008026 82 PDSLVK---------LESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFA 152 (580)
Q Consensus 82 P~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 152 (580)
|..++. +++|+.|+|++|+++.+++.+..+.+|+.|++++|.+..+|+. +.. +..+.
T Consensus 167 p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~-l~~-------------l~~L~ 232 (328)
T 4fcg_A 167 PEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPA-IHH-------------LPKLE 232 (328)
T ss_dssp CSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGG-GGG-------------CTTCC
T ss_pred ChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCchh-hcc-------------CCCCC
Confidence 988765 9999999999999997777789999999999999999987753 222 22333
Q ss_pred cccCCCC-CCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCc
Q 008026 153 ENWKGND-PCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQ 231 (580)
Q Consensus 153 ~~~~~~~-~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~ 231 (580)
...+.++ ....++..+..+++|+.|+|++|++.+.+|..++++++|+.|+|++|++.+.+|++++.+++|+.+++..|.
T Consensus 233 ~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp EEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred EEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 4444443 334466777888899999999999999999999999999999999999999999999999999999999876
Q ss_pred cc
Q 008026 232 LY 233 (580)
Q Consensus 232 l~ 233 (580)
+.
T Consensus 313 ~~ 314 (328)
T 4fcg_A 313 QA 314 (328)
T ss_dssp SC
T ss_pred HH
Confidence 65
No 271
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.90 E-value=4.9e-24 Score=233.27 Aligned_cols=253 Identities=17% Similarity=0.125 Sum_probs=170.6
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-C-CCCCCCCcEEeccCCcccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-D-FSGVKQLESLSLRDNFFTG 79 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~-~~~l~~L~~L~L~~N~l~~ 79 (580)
|+++ .+|+.+ ..+..|+.+++++|.+....|..+.++++|++|+|++|.+.+.+| . +..+++|+.|+|++|++.+
T Consensus 288 n~l~-~lp~~l--~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 364 (606)
T 3t6q_A 288 THLS-ELPSGL--VGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364 (606)
T ss_dssp SCCS-CCCSSC--CSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCE
T ss_pred CccC-CCChhh--cccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCcccc
Confidence 4444 677777 456777777777776666666677777777777777777765554 2 6667777777777777664
Q ss_pred cC--CccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCC-CCchhHHHHHHHHH-----------h
Q 008026 80 PV--PDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPG-ACDPRLNALLSVVK-----------L 144 (580)
Q Consensus 80 ~~--P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~-~~~~~l~~l~~~~~-----------~ 144 (580)
.. |..+..+++|+.|+|++|++++.+|. +..+.+|+.|++++|.+....+ ..+..+..+..+.. .
T Consensus 365 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 444 (606)
T 3t6q_A 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQL 444 (606)
T ss_dssp EEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTT
T ss_pred ccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHH
Confidence 33 55566666666777766666666553 5556666666666666554432 22333332221111 1
Q ss_pred hCCccccccccCCCCCCCC----ccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCC
Q 008026 145 MGYPQRFAENWKGNDPCSD----WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLG 220 (580)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~ 220 (580)
...+..+....+.++.... .+..+..+++|+.|++++|++++..|..|+.+++|+.|+|++|++++..|..+..++
T Consensus 445 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 524 (606)
T 3t6q_A 445 FDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLK 524 (606)
T ss_dssp TTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCC
T ss_pred HhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccc
Confidence 1122334444444444432 113456678899999999999988888999999999999999999988899999999
Q ss_pred CCCEEEccCCcccccCCCCCC----CceeecCCCCCCCCCCC
Q 008026 221 ALKELDVSNNQLYGKIPSFKS----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 221 ~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~c~~~~ 258 (580)
.| +|++++|++++.+|..+. ...+++.+|||.|.|+.
T Consensus 525 ~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 525 GI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp SC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred cc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 99 999999999988776543 35689999999998763
No 272
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.90 E-value=4.3e-24 Score=234.75 Aligned_cols=91 Identities=22% Similarity=0.194 Sum_probs=80.0
Q ss_pred eccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCCC-----
Q 008026 168 TCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKSN----- 242 (580)
Q Consensus 168 ~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~~----- 242 (580)
+..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|++|||++|+|++.+|+.+..
T Consensus 490 ~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L 569 (635)
T 4g8a_A 490 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSL 569 (635)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTC
T ss_pred hhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcC
Confidence 344568999999999999888999999999999999999999777888999999999999999999999987642
Q ss_pred ceeecCCCCCCCCCCC
Q 008026 243 AIVNTDGNPDIGKEKS 258 (580)
Q Consensus 243 ~~~~~~~n~~~c~~~~ 258 (580)
..+++++|||.|+|..
T Consensus 570 ~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 570 AFLNLTQNDFACTCEH 585 (635)
T ss_dssp CEEECTTCCBCCSGGG
T ss_pred CEEEeeCCCCcccCCc
Confidence 4589999999999864
No 273
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=2e-24 Score=241.47 Aligned_cols=190 Identities=17% Similarity=0.214 Sum_probs=125.0
Q ss_pred CchhhcCcccCceEecccCcCcC------------------CCCCCC--CCCCCcEEeccCCcccccCCccccCCCCCcE
Q 008026 34 GIDVIQNMTSLKEIWLHSNAFSG------------------PLPDFS--GVKQLESLSLRDNFFTGPVPDSLVKLESLKI 93 (580)
Q Consensus 34 ~~~~~~~l~~L~~L~L~~N~l~~------------------~~p~~~--~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~ 93 (580)
+|..|.+|++|++|+|++|.|++ .+++++ ++++|+.|+|++|++.+.+|..|++|++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 67778888888888888888888 444566 8888888888888888888888888888888
Q ss_pred EEccCCc-ccc-cCC-CCCccc-------ccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCC
Q 008026 94 VNMTNNL-LQG-PVP-EFDRSV-------SLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD 163 (580)
Q Consensus 94 L~L~~N~-l~~-~~~-~~~~~~-------~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (580)
|+|++|+ +++ .+| .+..+. +|+.|++++|.+..+|.. ..+..+..+....+.++....
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~------------~~l~~L~~L~~L~Ls~N~l~~ 587 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPAS------------ASLQKMVKLGLLDCVHNKVRH 587 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCH------------HHHTTCTTCCEEECTTSCCCB
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCCh------------hhhhcCCCCCEEECCCCCccc
Confidence 8888887 887 444 355554 888888888888766540 011122233333344444444
Q ss_pred ccceeccCCcEEEEEecCCcccccCcccccCCCC-CcEEeccCCcccccCCccCcCCCC--CCEEEccCCcccccCCC
Q 008026 164 WIGVTCTKGNITVINFQKMNLTGTISPEFASFKS-LQRLILADNNLSGMIPEGLSVLGA--LKELDVSNNQLYGKIPS 238 (580)
Q Consensus 164 ~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~-L~~L~ls~N~l~g~~p~~l~~l~~--L~~l~ls~N~l~g~~p~ 238 (580)
+| .+..+++|+.|+|++|++. .+|..+.++++ |+.|+|++|+|. .+|..+..++. |+.|+|++|+++|.+|.
T Consensus 588 lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~ 662 (876)
T 4ecn_A 588 LE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662 (876)
T ss_dssp CC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSS
T ss_pred ch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCcccc
Confidence 44 4455556666666666666 56666666665 666666666665 55655555443 66666666666655553
No 274
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.2e-23 Score=207.73 Aligned_cols=201 Identities=19% Similarity=0.105 Sum_probs=163.1
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKI 93 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~ 93 (580)
.++..|+.++++++.+. .+|..+. ++|++|+|++|.|++..| .|.++++|+.|+|++|+|+ .+|.. +.+++|+.
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~-~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC-SCCTTCCE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCC-CCCCcCCE
Confidence 45666777777777554 5665553 689999999999998777 5888999999999999998 55554 78999999
Q ss_pred EEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCc
Q 008026 94 VNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGN 173 (580)
Q Consensus 94 L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (580)
|+|++|+++.++..+..+.+|+.|++++|.+..+++..+. .+++
T Consensus 82 L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~------------------------------------~l~~ 125 (290)
T 1p9a_G 82 LDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR------------------------------------GLGE 125 (290)
T ss_dssp EECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTT------------------------------------TCTT
T ss_pred EECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHc------------------------------------CCCC
Confidence 9999999998877788899999999999999888765442 2348
Q ss_pred EEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC----CceeecCC
Q 008026 174 ITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS----NAIVNTDG 249 (580)
Q Consensus 174 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~ 249 (580)
|+.|+|++|++++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++ .+|..+. ...+.+.+
T Consensus 126 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~ 204 (290)
T 1p9a_G 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHG 204 (290)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCS
T ss_pred CCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCC
Confidence 999999999999766667889999999999999999444445678999999999999999 5555432 34588899
Q ss_pred CCCCCCCC
Q 008026 250 NPDIGKEK 257 (580)
Q Consensus 250 n~~~c~~~ 257 (580)
|||.|.|.
T Consensus 205 Np~~C~c~ 212 (290)
T 1p9a_G 205 NPWLCNCE 212 (290)
T ss_dssp CCBCCSGG
T ss_pred CCccCcCc
Confidence 99999875
No 275
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=6.3e-25 Score=240.92 Aligned_cols=230 Identities=15% Similarity=0.135 Sum_probs=152.5
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCC-----------------Cchhhc--CcccCceEecccCcCcCCCC-CC
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGG-----------------GIDVIQ--NMTSLKEIWLHSNAFSGPLP-DF 61 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p-~~ 61 (580)
|+++| ||..| .+++.|+.+++++|.+.+. +|+.++ ++++|++|+|++|.+.+.+| .|
T Consensus 193 n~l~~-ip~~l--~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l 269 (636)
T 4eco_A 193 NNITF-VSKAV--MRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFL 269 (636)
T ss_dssp CEEEE-ECGGG--GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTT
T ss_pred CCCcc-CCHHH--hcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHH
Confidence 67888 99998 6688888888888876654 888888 99999999999999998888 58
Q ss_pred CCCCCCcEEeccCCc-ccc-cCCccccCC------CCCcEEEccCCcccccCC--CCCcccccccccccCCCCC-CCCCC
Q 008026 62 SGVKQLESLSLRDNF-FTG-PVPDSLVKL------ESLKIVNMTNNLLQGPVP--EFDRSVSLDMAKGSNNFCL-PSPGA 130 (580)
Q Consensus 62 ~~l~~L~~L~L~~N~-l~~-~~P~~~~~l------~~L~~L~L~~N~l~~~~~--~~~~~~~L~~l~l~~n~~~-~~~~~ 130 (580)
.++++|++|+|++|+ ++| .+|..++++ ++|+.|+|++|+++.+++ .+..+.+|+.|++++|.+. .+|
T Consensus 270 ~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-- 347 (636)
T 4eco_A 270 KALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-- 347 (636)
T ss_dssp TTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC--
T ss_pred hcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchh--
Confidence 889999999999998 888 788888876 888888888888886555 5888888888888888887 666
Q ss_pred CchhHHHHHHHH----------HhhCCccc-cccccCCCCCCCCccceeccCC--cEEEEEecCCcccccCccccc----
Q 008026 131 CDPRLNALLSVV----------KLMGYPQR-FAENWKGNDPCSDWIGVTCTKG--NITVINFQKMNLTGTISPEFA---- 193 (580)
Q Consensus 131 ~~~~l~~l~~~~----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~L~~L~ls~n~l~~~~p~~~~---- 193 (580)
.+..+..|..+. ..+..+.. +....+.++....+|..+..+. +|+.|++++|++.+.+|..+.
T Consensus 348 ~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 348 AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 332222221111 01111122 3333334444444444443332 555566666655555555555
Q ss_pred ---CCCCCcEEeccCCcccccCCccC-cCCCCCCEEEccCCcccccCCC
Q 008026 194 ---SFKSLQRLILADNNLSGMIPEGL-SVLGALKELDVSNNQLYGKIPS 238 (580)
Q Consensus 194 ---~l~~L~~L~ls~N~l~g~~p~~l-~~l~~L~~l~ls~N~l~g~~p~ 238 (580)
.+++|+.|+|++|+++ .+|..+ ..+++|++|+|++|+++ .+|.
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~ 474 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPK 474 (636)
T ss_dssp SCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCS
T ss_pred ccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCH
Confidence 5555556666666555 444433 23555666666666655 4443
No 276
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=3.2e-24 Score=239.90 Aligned_cols=244 Identities=14% Similarity=0.107 Sum_probs=160.2
Q ss_pred cc-ccc-CCCCCccccccc-------eEEecccCCCCCCCCCch--hhcCcccCceEecccCcCcCCCCCCCCCCCCcEE
Q 008026 2 LQ-LIG-GLPASFSGSQIQ-------SLWVNGQNGNAKLGGGID--VIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESL 70 (580)
Q Consensus 2 ~~-~~~-~~P~~~~~~~l~-------~L~~~~~~~n~~~~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L 70 (580)
|+ ++| .+|..| .++. .|+.+++++|++. .+|. .|.++++|++|+|++|+|+ .+|.|..+++|+.|
T Consensus 525 N~~lsg~~iP~~i--~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L 600 (876)
T 4ecn_A 525 NRGISAAQLKADW--TRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDL 600 (876)
T ss_dssp CTTSCHHHHHHHH--HHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEE
T ss_pred CCCcccccchHHH--HhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEE
Confidence 55 666 777766 3343 6777777777665 6666 7788888888888888877 55577777888888
Q ss_pred eccCCcccccCCccccCCCC-CcEEEccCCcccccCCCCCcccc--cccccccCCCCCCCCCCCchhHH-----HHH---
Q 008026 71 SLRDNFFTGPVPDSLVKLES-LKIVNMTNNLLQGPVPEFDRSVS--LDMAKGSNNFCLPSPGACDPRLN-----ALL--- 139 (580)
Q Consensus 71 ~L~~N~l~~~~P~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~--L~~l~l~~n~~~~~~~~~~~~l~-----~l~--- 139 (580)
+|++|++. .+|..+.++++ |+.|+|++|+++.++..+..+.. |+.|++++|.+...++.....+. +|.
T Consensus 601 ~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 601 KLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp ECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred ECcCCccc-cchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEE
Confidence 88888887 77777777777 88888888777755444444432 66666666666544332210000 000
Q ss_pred -------HHHHh-hCCccccccccCCCCCCCCccceeccC--------CcEEEEEecCCcccccCccccc--CCCCCcEE
Q 008026 140 -------SVVKL-MGYPQRFAENWKGNDPCSDWIGVTCTK--------GNITVINFQKMNLTGTISPEFA--SFKSLQRL 201 (580)
Q Consensus 140 -------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~L~~L~ls~n~l~~~~p~~~~--~l~~L~~L 201 (580)
.++.. ...+..+....+.++.+..+|...+.. ++|+.|+|++|+++ .+|..+. .+++|+.|
T Consensus 680 Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L 758 (876)
T 4ecn_A 680 LSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNM 758 (876)
T ss_dssp CCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEE
T ss_pred ccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEE
Confidence 00000 012233444445555555555544432 27888888888888 7888887 88888888
Q ss_pred eccCCcccccCCccCcCCCCCCEEEccC------CcccccCCCCCCC----ceeecCCCCC
Q 008026 202 ILADNNLSGMIPEGLSVLGALKELDVSN------NQLYGKIPSFKSN----AIVNTDGNPD 252 (580)
Q Consensus 202 ~ls~N~l~g~~p~~l~~l~~L~~l~ls~------N~l~g~~p~~~~~----~~~~~~~n~~ 252 (580)
+|++|+|++ +|.++..+++|+.|+|++ |++.+.+|..+.. ..+++++|..
T Consensus 759 ~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 759 DVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp ECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred EeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 888888885 788888888888888866 7778888876543 3477777765
No 277
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=8.4e-23 Score=199.70 Aligned_cols=197 Identities=22% Similarity=0.187 Sum_probs=161.3
Q ss_pred EecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCcc-ccCCCCCcEEEccC
Q 008026 21 WVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS-LVKLESLKIVNMTN 98 (580)
Q Consensus 21 ~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~-~~~l~~L~~L~L~~ 98 (580)
..++++++.+. .+|..+. ++|++|+|++|++++.++ .|.++++|++|+|++|+++ .+|.. |.++++|++|+|++
T Consensus 19 ~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 19 NSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCS
T ss_pred CEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCC
Confidence 34556666444 5665443 589999999999998877 5889999999999999999 56655 68899999999999
Q ss_pred CcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEE
Q 008026 99 NLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVI 177 (580)
Q Consensus 99 N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L 177 (580)
|++++.++. +..+.+|+.|++++|.+..+++..+. .+++|+.|
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------------------------------------~l~~L~~L 138 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFD------------------------------------SLTKLTYL 138 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTT------------------------------------TCTTCCEE
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhC------------------------------------cCcCCCEE
Confidence 999998876 67889999999999998887765432 23489999
Q ss_pred EecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC----CceeecCCCCCC
Q 008026 178 NFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS----NAIVNTDGNPDI 253 (580)
Q Consensus 178 ~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~ 253 (580)
+|++|++.+..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+. ...+.+.+|||.
T Consensus 139 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 139 SLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 9999999966556689999999999999999965566789999999999999999976665443 346899999999
Q ss_pred CCCC
Q 008026 254 GKEK 257 (580)
Q Consensus 254 c~~~ 257 (580)
|.|.
T Consensus 219 c~c~ 222 (270)
T 2o6q_A 219 CTCN 222 (270)
T ss_dssp CSSS
T ss_pred CCCc
Confidence 9875
No 278
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=1.2e-23 Score=206.53 Aligned_cols=153 Identities=16% Similarity=0.092 Sum_probs=119.8
Q ss_pred HHHHhhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccCh----------------hhHHHHHHHHHHHHhcCC
Q 008026 389 VLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISG----------------KGLTEFKSEIAVLTKVRH 452 (580)
Q Consensus 389 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l~h 452 (580)
.+......|.+.+.||+|+||.||+|...+|+.||+|++....... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 3444455677889999999999999988779999999986432111 13567899999999999
Q ss_pred CcccceeeEEEcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCe
Q 008026 453 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNI 532 (580)
Q Consensus 453 ~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NI 532 (580)
| +++.+++.. +..|+||||+++++|.+ +. . .....++.|++.||+|||+ .+|+||||||+||
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~---------~--~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NI 224 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR---------V--ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNV 224 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC---------C--SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cc---------h--hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHE
Confidence 4 666665533 55699999999999987 41 1 2245799999999999998 8999999999999
Q ss_pred EecCCCcEEEEeeccccccCCCCCCccccccccCCccCccccC
Q 008026 533 LLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAG 575 (580)
Q Consensus 533 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~Gt~~y~APE~~~ 575 (580)
|++ ++.+||+|||+|+. +..|+|||++.
T Consensus 225 Ll~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 999 99999999999864 33467777764
No 279
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.89 E-value=2.1e-23 Score=227.38 Aligned_cols=226 Identities=18% Similarity=0.158 Sum_probs=150.7
Q ss_pred cccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCcccccCC
Q 008026 4 LIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVP 82 (580)
Q Consensus 4 ~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~P 82 (580)
-.+.+|..+. .++..|+.+++++|.+.+..|..|.++++|++|+|++|.|++.+|. |.++++|++|+|++|+|+ .+|
T Consensus 62 ~l~~lp~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~ 139 (597)
T 3oja_B 62 TMRKLPAALL-DSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLP 139 (597)
T ss_dssp EESEECTHHH-HHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred CCCCcCHHHH-ccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCC
Confidence 3455666532 4567778888888877776667888899999999999999888774 788899999999999988 566
Q ss_pred cc-ccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHH----------------HHHHHh
Q 008026 83 DS-LVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNAL----------------LSVVKL 144 (580)
Q Consensus 83 ~~-~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l----------------~~~~~~ 144 (580)
.. |+++++|+.|+|++|.+++.+|. |..+.+|+.|++++|.+..++...++.+..+ ..+...
T Consensus 140 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls 219 (597)
T 3oja_B 140 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDAS 219 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECC
T ss_pred HHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeecc
Confidence 55 68899999999999999888875 7888888889988888877653332222110 000000
Q ss_pred --------hCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccC
Q 008026 145 --------MGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGL 216 (580)
Q Consensus 145 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l 216 (580)
...+..+....+.++..... ..+..+++|+.|+|++|.+.+.+|..|+.+++|+.|+|++|+++ .+|..+
T Consensus 220 ~n~l~~~~~~~~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~ 297 (597)
T 3oja_B 220 HNSINVVRGPVNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYG 297 (597)
T ss_dssp SSCCCEEECSCCSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCC-EEECSS
T ss_pred CCcccccccccCCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCC-CCCccc
Confidence 00011233333444444332 34555566777777777777666666666666666666666666 355555
Q ss_pred cCCCCCCEEEccCCccc
Q 008026 217 SVLGALKELDVSNNQLY 233 (580)
Q Consensus 217 ~~l~~L~~l~ls~N~l~ 233 (580)
..+++|+.|+|++|+++
T Consensus 298 ~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 298 QPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp SCCTTCCEEECCSSCCC
T ss_pred ccCCCCcEEECCCCCCC
Confidence 66666666666666665
No 280
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=4.9e-23 Score=203.30 Aligned_cols=186 Identities=17% Similarity=0.142 Sum_probs=163.0
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSL 85 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~ 85 (580)
..+|..+. ..|+.+++++|.+....+..|.++++|++|+|++|.|++..+. ..+++|++|+|++|+|+ .+|..+
T Consensus 23 ~~ip~~~~----~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~ 96 (290)
T 1p9a_G 23 TALPPDLP----KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLG 96 (290)
T ss_dssp SSCCSCCC----TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCS-SCCCCT
T ss_pred CcCCCCCC----CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCC-cCchhh
Confidence 36787773 4566677888888777778999999999999999999976554 78999999999999999 899999
Q ss_pred cCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCc
Q 008026 86 VKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW 164 (580)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (580)
..+++|+.|+|++|+++++++. |..+.+|+.|++++|.+..+++..+.
T Consensus 97 ~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~------------------------------- 145 (290)
T 1p9a_G 97 QTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLT------------------------------- 145 (290)
T ss_dssp TTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTT-------------------------------
T ss_pred ccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcc-------------------------------
Confidence 9999999999999999999875 88999999999999999988866542
Q ss_pred cceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccc
Q 008026 165 IGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 165 ~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
.+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+..+..|+.|+|++|++..
T Consensus 146 -----~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 146 -----PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp -----TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred -----cccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 2348999999999999555555788999999999999999 999999999999999999999974
No 281
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=1.1e-22 Score=199.00 Aligned_cols=194 Identities=19% Similarity=0.204 Sum_probs=162.8
Q ss_pred ccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCcccccC
Q 008026 3 QLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPV 81 (580)
Q Consensus 3 ~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~ 81 (580)
+++ .+|..+. ..|+.+++++|++....+..|.++++|++|+|++|.|+..++. |.++++|++|+|++|++.+..
T Consensus 27 ~l~-~ip~~~~----~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~ 101 (270)
T 2o6q_A 27 KLT-AIPSNIP----ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101 (270)
T ss_dssp CCS-SCCSCCC----TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCC
T ss_pred CCC-ccCCCCC----CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCC
Confidence 344 5888773 3455566777777766667899999999999999999987775 688999999999999999544
Q ss_pred CccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCC
Q 008026 82 PDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDP 160 (580)
Q Consensus 82 P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (580)
+..|.++++|+.|+|++|++++.++. |..+.+|+.|++++|.+..+++..+.
T Consensus 102 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--------------------------- 154 (270)
T 2o6q_A 102 IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFD--------------------------- 154 (270)
T ss_dssp TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT---------------------------
T ss_pred HhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHcc---------------------------
Confidence 45689999999999999999999886 78999999999999999888765432
Q ss_pred CCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 161 CSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 161 ~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
.+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++...-+
T Consensus 155 ---------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 155 ---------KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp ---------TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ---------CCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 23489999999999997666679999999999999999995555568899999999999999986543
No 282
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.89 E-value=3.1e-23 Score=229.99 Aligned_cols=230 Identities=17% Similarity=0.103 Sum_probs=166.7
Q ss_pred ceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC--CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 18 QSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 18 ~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
..|+.++++.|++.+..|..|.++++|++|+|++|.+++.+| .|.++++|++|+|++|++.+..|..|..+++|+.|+
T Consensus 381 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ 460 (680)
T 1ziw_A 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLM 460 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEE
T ss_pred CcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccch
Confidence 456666777777777667777778888888888888776554 367777888888888887766666677777777777
Q ss_pred ccCCccc--ccCC-CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCc-----c--
Q 008026 96 MTNNLLQ--GPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW-----I-- 165 (580)
Q Consensus 96 L~~N~l~--~~~~-~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-- 165 (580)
+++|.++ +..| .+..+.+|+.|++++|.+..+++..+..+..|.. ..+.++....+ |
T Consensus 461 l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~-------------L~Ls~N~l~~~~~~~~~~~ 527 (680)
T 1ziw_A 461 LRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEI-------------LDLQHNNLARLWKHANPGG 527 (680)
T ss_dssp CTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE-------------EECCSSCCGGGGSTTSTTS
T ss_pred hccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCE-------------EeCCCCCccccchhhccCC
Confidence 7777775 2333 4677777777777777777777665544433322 22222222211 1
Q ss_pred --ceeccCCcEEEEEecCCcccccCcc-cccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCC--
Q 008026 166 --GVTCTKGNITVINFQKMNLTGTISP-EFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFK-- 240 (580)
Q Consensus 166 --~~~~~~~~L~~L~ls~n~l~~~~p~-~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~-- 240 (580)
..+..+++|+.|+|++|+++ .+|. .|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++++..|..+
T Consensus 528 ~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 606 (680)
T 1ziw_A 528 PIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGP 606 (680)
T ss_dssp CCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHH
T ss_pred cchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcc
Confidence 12455679999999999999 5664 68999999999999999995555567899999999999999998877533
Q ss_pred ---CCceeecCCCCCCCCCCC-CCC
Q 008026 241 ---SNAIVNTDGNPDIGKEKS-SSF 261 (580)
Q Consensus 241 ---~~~~~~~~~n~~~c~~~~-~~~ 261 (580)
....+++++|||.|+|.. ..+
T Consensus 607 ~~~~L~~l~l~~N~~~c~c~~~~~~ 631 (680)
T 1ziw_A 607 AFRNLTELDMRFNPFDCTCESIAWF 631 (680)
T ss_dssp HHTTCSEEECTTCCCCBCCCCCSSE
T ss_pred cccccCEEEccCCCcccCCccHHHH
Confidence 345699999999999874 444
No 283
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.89 E-value=6e-24 Score=216.42 Aligned_cols=232 Identities=18% Similarity=0.125 Sum_probs=175.0
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCcc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 84 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~ 84 (580)
..+|..+. ..|+.+++++|++....+..|.++++|++|+|++|++++..| .|.++++|++|+|++|+++ .+|..
T Consensus 44 ~~iP~~~~----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~ 118 (353)
T 2z80_A 44 NSIPSGLT----EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSS 118 (353)
T ss_dssp SSCCTTCC----TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHH
T ss_pred cccccccc----ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHh
Confidence 46787773 356666777777666555689999999999999999998877 4889999999999999999 56665
Q ss_pred -ccCCCCCcEEEccCCcccccCC--CCCcccccccccccCC-CCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCC
Q 008026 85 -LVKLESLKIVNMTNNLLQGPVP--EFDRSVSLDMAKGSNN-FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDP 160 (580)
Q Consensus 85 -~~~l~~L~~L~L~~N~l~~~~~--~~~~~~~L~~l~l~~n-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (580)
|.++++|++|+|++|+++++++ .+..+.+|+.|++++| .+..+++..+..+. .+....+.++.
T Consensus 119 ~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~-------------~L~~L~l~~n~ 185 (353)
T 2z80_A 119 WFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT-------------FLEELEIDASD 185 (353)
T ss_dssp HHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC-------------EEEEEEEEETT
T ss_pred HhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCC-------------CCCEEECCCCC
Confidence 8999999999999999998877 4788999999999998 57766655543332 33333333333
Q ss_pred CCC-ccceeccCCcEEEEEecCCcccccCccc-ccCCCCCcEEeccCCccccc---------------------------
Q 008026 161 CSD-WIGVTCTKGNITVINFQKMNLTGTISPE-FASFKSLQRLILADNNLSGM--------------------------- 211 (580)
Q Consensus 161 ~~~-~~~~~~~~~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~ls~N~l~g~--------------------------- 211 (580)
... .+..+..+++|+.|++++|++. .+|.. +..+++|+.|++++|++++.
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred cCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 333 2445566678888888888886 45544 44578888888888888753
Q ss_pred ----CCccCcCCCCCCEEEccCCcccccCCCC-CC----CceeecCCCCCCCCCC
Q 008026 212 ----IPEGLSVLGALKELDVSNNQLYGKIPSF-KS----NAIVNTDGNPDIGKEK 257 (580)
Q Consensus 212 ----~p~~l~~l~~L~~l~ls~N~l~g~~p~~-~~----~~~~~~~~n~~~c~~~ 257 (580)
+|..+..+++|+.||+++|+++ .+|.. +. ...+++++|++.|.|+
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred chhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 3445678899999999999999 55554 22 3468999999999874
No 284
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.89 E-value=3.7e-23 Score=218.13 Aligned_cols=242 Identities=17% Similarity=0.123 Sum_probs=188.3
Q ss_pred cccccCCC-CCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-C--CCCCCCCcEEeccCCcc
Q 008026 2 LQLIGGLP-ASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-D--FSGVKQLESLSLRDNFF 77 (580)
Q Consensus 2 ~~~~~~~P-~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~--~~~l~~L~~L~L~~N~l 77 (580)
|++.+.+| ..| .+++.|+.+++++|.+.+..|..|.++++|++|+|++|.+++.+| . |..+++|++|+|++|++
T Consensus 64 n~~~~~i~~~~~--~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l 141 (455)
T 3v47_A 64 QTPGLVIRNNTF--RGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI 141 (455)
T ss_dssp CSTTCEECTTTT--TTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBC
T ss_pred CcccceECcccc--cccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCcc
Confidence 55666775 457 568888888888898887778889999999999999999987544 3 78899999999999999
Q ss_pred cccCCcc-ccCCCCCcEEEccCCcccccCCC-CCc----------------------------------ccccccccccC
Q 008026 78 TGPVPDS-LVKLESLKIVNMTNNLLQGPVPE-FDR----------------------------------SVSLDMAKGSN 121 (580)
Q Consensus 78 ~~~~P~~-~~~l~~L~~L~L~~N~l~~~~~~-~~~----------------------------------~~~L~~l~l~~ 121 (580)
.+..|.. +.++++|++|+|++|++++.++. +.. +.+|+.|++++
T Consensus 142 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~ 221 (455)
T 3v47_A 142 KKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSG 221 (455)
T ss_dssp CSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTT
T ss_pred CccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCC
Confidence 9766776 88999999999999999887664 222 13455555555
Q ss_pred C---------------------------------------------------------------CCCCCCCCCchhHHHH
Q 008026 122 N---------------------------------------------------------------FCLPSPGACDPRLNAL 138 (580)
Q Consensus 122 n---------------------------------------------------------------~~~~~~~~~~~~l~~l 138 (580)
| .+...++..+..
T Consensus 222 n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~---- 297 (455)
T 3v47_A 222 NGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSH---- 297 (455)
T ss_dssp SCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTT----
T ss_pred CcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhccc----
Confidence 4 444444443332
Q ss_pred HHHHHhhCCccccccccCCCCCCCCc-cceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCc
Q 008026 139 LSVVKLMGYPQRFAENWKGNDPCSDW-IGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLS 217 (580)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~ 217 (580)
+..+....+.++..... +..+..+++|+.|+|++|++.+..|..+.++++|++|+|++|++++..|.++.
T Consensus 298 ---------l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 368 (455)
T 3v47_A 298 ---------FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL 368 (455)
T ss_dssp ---------CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ---------CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc
Confidence 33444445555555543 44666778999999999999988899999999999999999999988899999
Q ss_pred CCCCCCEEEccCCcccccCCCCCC----CceeecCCCCCCCCCCC
Q 008026 218 VLGALKELDVSNNQLYGKIPSFKS----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 218 ~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~c~~~~ 258 (580)
.+++|++|+|++|++++..+..+. ...+++++|++.|.|+.
T Consensus 369 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 369 GLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 999999999999999986665543 35699999999999863
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.89 E-value=1.3e-23 Score=216.89 Aligned_cols=226 Identities=18% Similarity=0.157 Sum_probs=155.1
Q ss_pred ccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCcccccCCc
Q 008026 5 IGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPD 83 (580)
Q Consensus 5 ~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~P~ 83 (580)
.+.+|..+. ..++.|+.+++++|.+....+..|.++++|++|+|++|.+++.+|. |.++++|++|+|++|++. .+|.
T Consensus 57 l~~l~~~~~-~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~ 134 (390)
T 3o6n_A 57 MRKLPAALL-DSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPR 134 (390)
T ss_dssp ESEECTHHH-HHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCT
T ss_pred hhhCChhHh-cccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCH
Confidence 455676532 4567777888888877766667888999999999999999888775 788999999999999998 6776
Q ss_pred c-ccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHH----------------HHHHHh-
Q 008026 84 S-LVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNAL----------------LSVVKL- 144 (580)
Q Consensus 84 ~-~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l----------------~~~~~~- 144 (580)
. |.++++|+.|+|++|++++.++. +..+.+|+.|++++|.+..++...+..+..+ ..+...
T Consensus 135 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~ 214 (390)
T 3o6n_A 135 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASH 214 (390)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCS
T ss_pred HHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCC
Confidence 6 68899999999999999888775 7788889999999888877653322221110 000000
Q ss_pred -------hCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCc
Q 008026 145 -------MGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLS 217 (580)
Q Consensus 145 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~ 217 (580)
......+....+.++..... ..+..+++|+.|++++|++.+..|..+..+++|++|+|++|+++ .+|..+.
T Consensus 215 n~l~~~~~~~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~ 292 (390)
T 3o6n_A 215 NSINVVRGPVNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQ 292 (390)
T ss_dssp SCCCEEECCCCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSS
T ss_pred CeeeeccccccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccC
Confidence 00011223333334433332 34455667777777777777777777777777777777777776 4566666
Q ss_pred CCCCCCEEEccCCcccc
Q 008026 218 VLGALKELDVSNNQLYG 234 (580)
Q Consensus 218 ~l~~L~~l~ls~N~l~g 234 (580)
.+++|++|++++|++++
T Consensus 293 ~l~~L~~L~L~~n~l~~ 309 (390)
T 3o6n_A 293 PIPTLKVLDLSHNHLLH 309 (390)
T ss_dssp CCTTCCEEECCSSCCCC
T ss_pred CCCCCCEEECCCCccee
Confidence 67777777777777763
No 286
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.89 E-value=1.5e-23 Score=229.46 Aligned_cols=209 Identities=20% Similarity=0.097 Sum_probs=146.6
Q ss_pred hhcCcccCceEecccCcCcCCC--C-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCC--CCCcc
Q 008026 37 VIQNMTSLKEIWLHSNAFSGPL--P-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP--EFDRS 111 (580)
Q Consensus 37 ~~~~l~~L~~L~L~~N~l~~~~--p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~ 111 (580)
.+..+++|++|+|++|.+++.. | .+..+++|+.|+|++|++. .+|..+..+++|+.|++++|++++.+| .+..+
T Consensus 345 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 423 (606)
T 3vq2_A 345 KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL 423 (606)
T ss_dssp CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTC
T ss_pred hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhcc
Confidence 3445566666666666665542 3 3555666666666666666 455666666666666666666666655 35566
Q ss_pred cccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCC--ccceeccCCcEEEEEecCCcccccCc
Q 008026 112 VSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD--WIGVTCTKGNITVINFQKMNLTGTIS 189 (580)
Q Consensus 112 ~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~L~ls~n~l~~~~p 189 (580)
.+|+.|++++|.+...++..+..+ ..+....+.++.... .+..+..+++|+.|+|++|++++..|
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l-------------~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 490 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGL-------------TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISW 490 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTC-------------TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred ccCCEEECcCCCCCccchhhhcCC-------------CCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccCh
Confidence 666666666666655544433322 233334444444433 45566777899999999999999889
Q ss_pred ccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC-----CceeecCCCCCCCCCCCCC
Q 008026 190 PEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS-----NAIVNTDGNPDIGKEKSSS 260 (580)
Q Consensus 190 ~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~-----~~~~~~~~n~~~c~~~~~~ 260 (580)
..++++++|++|+|++|++++.+|..+..+++|++||+++|+++ .+|..+. ...+++++|||.|.|+...
T Consensus 491 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 491 GVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred hhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 99999999999999999999888999999999999999999999 5555432 3568999999999987543
No 287
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=1.3e-22 Score=198.66 Aligned_cols=184 Identities=19% Similarity=0.184 Sum_probs=125.1
Q ss_pred ccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
.+..|+.+++++|.+.. .+.+..+++|++|+|++|.+++ ++.+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 39 ~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHD-ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCC-CGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCC-chhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 45556666666664432 2346777777777777777775 34667777777777777777744444567777777777
Q ss_pred ccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcE
Q 008026 96 MTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNI 174 (580)
Q Consensus 96 L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 174 (580)
|++|++++.++. +..+.+|+.|++++|.+..+++..+. .+++|
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------------------------------------~l~~L 159 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD------------------------------------KLTNL 159 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------------------TCTTC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc------------------------------------cCccC
Confidence 777777777665 56677777777777777666544321 22367
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCC
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS 238 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~ 238 (580)
+.|++++|++++..|..++.+++|+.|+|++|++++..|..+..+++|+.|++++|++.+..|.
T Consensus 160 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 160 TELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 7777777777765555567777777777777777765566667777777777777777766664
No 288
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.89 E-value=1.3e-22 Score=219.80 Aligned_cols=89 Identities=22% Similarity=0.216 Sum_probs=61.4
Q ss_pred eccCCcEEEEEecCCcccccCccc-ccCC----------------------CCCcEEeccCCcccccCCccCcCCCCCCE
Q 008026 168 TCTKGNITVINFQKMNLTGTISPE-FASF----------------------KSLQRLILADNNLSGMIPEGLSVLGALKE 224 (580)
Q Consensus 168 ~~~~~~L~~L~ls~n~l~~~~p~~-~~~l----------------------~~L~~L~ls~N~l~g~~p~~l~~l~~L~~ 224 (580)
+..+++|+.|++++|++.+.+|.. +..+ ++|+.|+|++|+|+ .+|..+..+++|++
T Consensus 399 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~ 477 (562)
T 3a79_B 399 TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQE 477 (562)
T ss_dssp TTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSE
T ss_pred hcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCE
Confidence 455567777777777777545543 3333 56777777777776 77777778888888
Q ss_pred EEccCCcccccCCCC-CC----CceeecCCCCCCCCCCC
Q 008026 225 LDVSNNQLYGKIPSF-KS----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 225 l~ls~N~l~g~~p~~-~~----~~~~~~~~n~~~c~~~~ 258 (580)
|+|++|++++ +|.. +. ...+++++|+|.|.|+.
T Consensus 478 L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 478 LNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp EECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred EECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 8888888884 4543 32 23588889999988753
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.88 E-value=5e-23 Score=224.42 Aligned_cols=214 Identities=14% Similarity=0.098 Sum_probs=115.0
Q ss_pred cceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 17 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 17 l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
+..++.+++++|.+....+..|.++++|++|+|++|.|++.+| .|..+++|++|+|++|.|++..|..|+++++|+.|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 3445555555554433333445666666666666666666555 466666666666666666644444566666666666
Q ss_pred ccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccc--------ccc-------------
Q 008026 96 MTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQR--------FAE------------- 153 (580)
Q Consensus 96 L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~--------~~~------------- 153 (580)
|++|.++++++. |..+.+|+.|++++|.+..+++..+..+..|..+......+.. +..
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~ 209 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAI 209 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEEC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccC
Confidence 666666666655 3566666666666666666665555444433322211111110 000
Q ss_pred ------ccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEc
Q 008026 154 ------NWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDV 227 (580)
Q Consensus 154 ------~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l 227 (580)
..+.++....+++.. ..+|+.|+|++|.+++ +..++.+++|+.|+|++|.+.+.+|..+..+++|+.|+|
T Consensus 210 ~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 285 (597)
T 3oja_B 210 PIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 285 (597)
T ss_dssp CTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEEC
Confidence 001111111111111 1245566666666654 245666666666666666666666666666666666666
Q ss_pred cCCcccc
Q 008026 228 SNNQLYG 234 (580)
Q Consensus 228 s~N~l~g 234 (580)
++|++++
T Consensus 286 s~N~l~~ 292 (597)
T 3oja_B 286 SNNRLVA 292 (597)
T ss_dssp TTSCCCE
T ss_pred CCCCCCC
Confidence 6666665
No 290
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.88 E-value=3.8e-22 Score=201.06 Aligned_cols=227 Identities=18% Similarity=0.135 Sum_probs=161.7
Q ss_pred eEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEcc
Q 008026 19 SLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMT 97 (580)
Q Consensus 19 ~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~ 97 (580)
.|+.++++.+. ++.+|..+. +.|++|+|++|+|++.++ .|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 32 ~l~~l~~~~~~-l~~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLG-LEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSC-CCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCC-ccccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 45555666554 445665553 689999999999999887 58999999999999999997779999999999999999
Q ss_pred CCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHh-------------hCCccccccccCCCCCCCCc
Q 008026 98 NNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKL-------------MGYPQRFAENWKGNDPCSDW 164 (580)
Q Consensus 98 ~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 164 (580)
+|+++.++..+. .+|+.|++++|.+..+++..+..+..+..+... ...+..+......++....+
T Consensus 109 ~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l 186 (330)
T 1xku_A 109 KNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 186 (330)
T ss_dssp SSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC
Confidence 999998777665 689999999999988775444333333221111 11122223333344444444
Q ss_pred cceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC---
Q 008026 165 IGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS--- 241 (580)
Q Consensus 165 ~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~--- 241 (580)
+.... ++|+.|++++|++.+..|..+..+++|+.|+|++|++++..|..+..+++|++|++++|+++ .+|..+.
T Consensus 187 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 263 (330)
T 1xku_A 187 PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 263 (330)
T ss_dssp CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS
T ss_pred Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCC
Confidence 43332 47778888888888777777888888888888888888666667888888888888888887 5565443
Q ss_pred -CceeecCCCCCC
Q 008026 242 -NAIVNTDGNPDI 253 (580)
Q Consensus 242 -~~~~~~~~n~~~ 253 (580)
...+++++|...
T Consensus 264 ~L~~L~l~~N~i~ 276 (330)
T 1xku_A 264 YIQVVYLHNNNIS 276 (330)
T ss_dssp SCCEEECCSSCCC
T ss_pred CcCEEECCCCcCC
Confidence 234677777643
No 291
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.88 E-value=1.3e-22 Score=199.03 Aligned_cols=201 Identities=18% Similarity=0.110 Sum_probs=165.9
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++..|..| .++..|+.+++++|.+.+..+..|.++++|++|+|++|.+++..+ .|.++++|++|++++|++.+.
T Consensus 38 n~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 115 (276)
T 2z62_A 38 NPLRHLGSYSF--FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 115 (276)
T ss_dssp CCCCEECTTTT--TTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCS
T ss_pred CcccccCHhHh--ccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCcccc
Confidence 56666666677 567888888999998877777789999999999999999998887 589999999999999999955
Q ss_pred CCccccCCCCCcEEEccCCccccc--CCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCC
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGP--VPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGN 158 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 158 (580)
.+..+..+++|+.|+|++|++++. +..+..+.+|+.|++++|.+..+++..+..+..+
T Consensus 116 ~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-------------------- 175 (276)
T 2z62_A 116 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM-------------------- 175 (276)
T ss_dssp TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTC--------------------
T ss_pred CchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhc--------------------
Confidence 555799999999999999999984 4468899999999999999988876555433311
Q ss_pred CCCCCccceeccCCcEE-EEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 159 DPCSDWIGVTCTKGNIT-VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 159 ~~~~~~~~~~~~~~~L~-~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
..|. .|++++|++.+ +|.......+|++|+|++|++++..+..+..+++|+.|++++|++++..|
T Consensus 176 -------------~~l~l~L~ls~n~l~~-~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 176 -------------PLLNLSLDLSLNPMNF-IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp -------------TTCCEEEECCSSCCCE-ECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred -------------cccceeeecCCCcccc-cCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 1333 79999999995 44555556689999999999995555567899999999999999998776
Q ss_pred C
Q 008026 238 S 238 (580)
Q Consensus 238 ~ 238 (580)
.
T Consensus 242 ~ 242 (276)
T 2z62_A 242 R 242 (276)
T ss_dssp T
T ss_pred c
Confidence 4
No 292
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.88 E-value=2.1e-22 Score=216.08 Aligned_cols=97 Identities=16% Similarity=0.111 Sum_probs=61.0
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccc-c
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTG-P 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~-~ 80 (580)
|++++..|..| .++..|+.+++++|++.+..|+.|.++++|++|+|++|+|+..++. .+++|++|+|++|++++ .
T Consensus 31 n~i~~~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~l~~~~ 106 (520)
T 2z7x_B 31 NYISELWTSDI--LSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNAFDALP 106 (520)
T ss_dssp SCCCCCCHHHH--TTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSCCSSCC
T ss_pred CcccccChhhc--cccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCcccccc
Confidence 44444444555 4456666666666666655566677777777777777776643323 56677777777777764 3
Q ss_pred CCccccCCCCCcEEEccCCccc
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQ 102 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~ 102 (580)
+|..|+++++|+.|+|++|+++
T Consensus 107 ~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 107 ICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp CCGGGGGCTTCCEEEEEESSCC
T ss_pred chhhhccCCcceEEEecCcccc
Confidence 5666777777777776666654
No 293
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.88 E-value=2.1e-22 Score=220.25 Aligned_cols=238 Identities=20% Similarity=0.107 Sum_probs=145.6
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++..|..| .+++.|+.+++++|++.+..|++|.++++|++|+|++|++++..| .|.++++|++|+|++|++++.
T Consensus 43 n~i~~~~~~~~--~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l 120 (606)
T 3t6q_A 43 NVLPTIQNTTF--SRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSI 120 (606)
T ss_dssp CCCSEECTTTS--TTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCG
T ss_pred CccCcCChhHh--ccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccC
Confidence 45555555566 446666666666666666556666666666666666666666555 466666666666666666643
Q ss_pred CCccccCCCCCcEEEccCCccccc-CCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCC
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGP-VPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGND 159 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 159 (580)
.|..|+++++|++|+|++|++++. +|.+..+.+|+.|++++|.+..+++..+..+..+..+ .....++
T Consensus 121 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l-----------~L~l~~n 189 (606)
T 3t6q_A 121 DFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNL-----------SLNLNGN 189 (606)
T ss_dssp GGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSE-----------EEECTTC
T ss_pred CcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhccccee-----------EEecCCC
Confidence 355566666666666666666663 3445556666666666666665543333222222100 0111111
Q ss_pred CCCCcc--------------------------------------------------ceeccC--CcEEEEEecCCccccc
Q 008026 160 PCSDWI--------------------------------------------------GVTCTK--GNITVINFQKMNLTGT 187 (580)
Q Consensus 160 ~~~~~~--------------------------------------------------~~~~~~--~~L~~L~ls~n~l~~~ 187 (580)
.....+ ..+..+ .+|+.|++++|++.+.
T Consensus 190 ~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~ 269 (606)
T 3t6q_A 190 DIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNI 269 (606)
T ss_dssp CCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSC
T ss_pred ccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCcc
Confidence 111000 000001 1688888888888876
Q ss_pred CcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC----CceeecCCCCCC
Q 008026 188 ISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS----NAIVNTDGNPDI 253 (580)
Q Consensus 188 ~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~ 253 (580)
.+..|+.+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+. ...+.+.+|...
T Consensus 270 ~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~ 338 (606)
T 3t6q_A 270 SSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKR 338 (606)
T ss_dssp CTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSC
T ss_pred CHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcc
Confidence 6667888888888888888888 7888888888888888888888877664432 234666666543
No 294
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.88 E-value=3.8e-23 Score=210.47 Aligned_cols=219 Identities=14% Similarity=0.120 Sum_probs=173.4
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++..+..| .++..|+.+++++|++.+..++.|.++++|++|+|++|+|++.++. |.++++|++|+|++|++. .
T Consensus 62 n~i~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~ 138 (353)
T 2z80_A 62 NRITYISNSDL--QRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-T 138 (353)
T ss_dssp SCCCEECTTTT--TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-S
T ss_pred CcCcccCHHHh--ccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-c
Confidence 55665445577 5688888888888988877778899999999999999999987765 888999999999999999 6
Q ss_pred CCc--cccCCCCCcEEEccCC-cccccCC-CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccC
Q 008026 81 VPD--SLVKLESLKIVNMTNN-LLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWK 156 (580)
Q Consensus 81 ~P~--~~~~l~~L~~L~L~~N-~l~~~~~-~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 156 (580)
+|. .|.++++|+.|++++| .++..++ .+..+.+|+.|++++|.+...++..+..+ ..+....+
T Consensus 139 l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l-------------~~L~~L~l 205 (353)
T 2z80_A 139 LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI-------------QNVSHLIL 205 (353)
T ss_dssp SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC-------------SEEEEEEE
T ss_pred cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcc-------------ccCCeecC
Confidence 776 6899999999999999 5777766 48889999999999999888765554332 23333334
Q ss_pred CCCCCCCccceec-cCCcEEEEEecCCccccc-------------------------------CcccccCCCCCcEEecc
Q 008026 157 GNDPCSDWIGVTC-TKGNITVINFQKMNLTGT-------------------------------ISPEFASFKSLQRLILA 204 (580)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~L~~L~ls~n~l~~~-------------------------------~p~~~~~l~~L~~L~ls 204 (580)
.++....++.... .+++|+.|++++|++++. +|..+..+++|++|+|+
T Consensus 206 ~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls 285 (353)
T 2z80_A 206 HMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFS 285 (353)
T ss_dssp ECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECC
T ss_pred CCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECC
Confidence 4444444443322 356788888888888752 56678899999999999
Q ss_pred CCcccccCCccC-cCCCCCCEEEccCCcccccCC
Q 008026 205 DNNLSGMIPEGL-SVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 205 ~N~l~g~~p~~l-~~l~~L~~l~ls~N~l~g~~p 237 (580)
+|+++ .+|..+ ..+++|++|++++|++++..|
T Consensus 286 ~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 286 RNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 99999 788775 899999999999999998776
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.88 E-value=3.1e-22 Score=201.96 Aligned_cols=223 Identities=17% Similarity=0.154 Sum_probs=153.4
Q ss_pred CCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccc
Q 008026 7 GLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSL 85 (580)
Q Consensus 7 ~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~ 85 (580)
.+|..+. ..|+.+++++|.+.+..+..|.++++|++|+|++|++++..| .|.++++|++|+|++|++. .+|..+
T Consensus 47 ~ip~~~~----~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~ 121 (332)
T 2ft3_A 47 AVPKEIS----PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNL 121 (332)
T ss_dssp SCCSCCC----TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSC
T ss_pred ccCCCCC----CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCccc
Confidence 4555542 234445555565555555567777777777777777776655 4666777777777777776 666665
Q ss_pred cCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCC--CCCCCchhHHHHHHHHHhhCCccccccccCCCCCCC
Q 008026 86 VKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLP--SPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS 162 (580)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~--~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (580)
. ++|++|+|++|++++.++. +..+.+|+.|++++|.+.. ..+..+.. + .+....+.++...
T Consensus 122 ~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-------------l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 122 P--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG-------------L-KLNYLRISEAKLT 185 (332)
T ss_dssp C--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS-------------C-CCSCCBCCSSBCS
T ss_pred c--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC-------------C-ccCEEECcCCCCC
Confidence 4 6677777777777766664 5666777777777776643 22222211 1 2333344445555
Q ss_pred CccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC-
Q 008026 163 DWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS- 241 (580)
Q Consensus 163 ~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~- 241 (580)
.++.... ++|+.|++++|++.+..|..+..+++|+.|+|++|++.+..|..+..+++|++|++++|+++ .+|..+.
T Consensus 186 ~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 186 GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 5554443 58999999999999887889999999999999999999777778999999999999999999 6776543
Q ss_pred ---CceeecCCCCCC
Q 008026 242 ---NAIVNTDGNPDI 253 (580)
Q Consensus 242 ---~~~~~~~~n~~~ 253 (580)
...+++++|...
T Consensus 263 l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 263 LKLLQVVYLHTNNIT 277 (332)
T ss_dssp CTTCCEEECCSSCCC
T ss_pred CccCCEEECCCCCCC
Confidence 345888888754
No 296
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.88 E-value=1.1e-22 Score=210.05 Aligned_cols=234 Identities=14% Similarity=0.080 Sum_probs=158.4
Q ss_pred ccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
.+..|+.+++++|.+....+..|.++++|++|+|++|.+++..+ .|..+++|++|+|++|++.+..|..|.++++|+.|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35666666666665444444557888888888888888887776 58888888888888888886556668888888888
Q ss_pred EccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCcc--------ccc-------------
Q 008026 95 NMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQ--------RFA------------- 152 (580)
Q Consensus 95 ~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~--------~~~------------- 152 (580)
+|++|+++.+++. +..+.+|+.|++++|.+..+++..+..+..|..+......+. .+.
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~ 202 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 202 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccC
Confidence 8888888887776 577888888888888888887766655554433322111111 111
Q ss_pred ------cccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEE
Q 008026 153 ------ENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELD 226 (580)
Q Consensus 153 ------~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ 226 (580)
.....++....+++.. ..+|+.|++++|++++. +.+..+++|++|+|++|++.+..|..+..+++|+.|+
T Consensus 203 ~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 278 (390)
T ss_dssp CCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred CCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEE
Confidence 1111111121122111 24677888888888742 4688888888888888888877788888888888888
Q ss_pred ccCCcccccCCCC---CCCceeecCCCCCC
Q 008026 227 VSNNQLYGKIPSF---KSNAIVNTDGNPDI 253 (580)
Q Consensus 227 ls~N~l~g~~p~~---~~~~~~~~~~n~~~ 253 (580)
+++|++++..+.. .....+++++|...
T Consensus 279 L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 279 ISNNRLVALNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp CCSSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred CCCCcCcccCcccCCCCCCCEEECCCCcce
Confidence 8888888643222 12345677777543
No 297
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.88 E-value=5.2e-23 Score=218.38 Aligned_cols=254 Identities=16% Similarity=0.071 Sum_probs=186.7
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++..|..| .++..|+.+++++|++....+..|.++++|++|+|++|++++.+| .|..+++|+.|+|++|++.+.
T Consensus 66 n~i~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 143 (477)
T 2id5_A 66 NIVSAVEPGAF--NNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYI 143 (477)
T ss_dssp SCCCEECTTTT--TTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEE
T ss_pred CccCEeChhhh--hCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcccee
Confidence 66777778888 567888888888887766555678889999999999999988777 478888999999999988876
Q ss_pred CCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHH------------------
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSV------------------ 141 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~------------------ 141 (580)
.|..|.++++|+.|+|++|++++.++. +..+.+|+.|++++|.+..+++..+..+..|..+
T Consensus 144 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 223 (477)
T 2id5_A 144 SHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG 223 (477)
T ss_dssp CTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTT
T ss_pred ChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccC
Confidence 777888888888888888888877664 6666677777777776666555443332222110
Q ss_pred ----------------H-HhhCCccccccccCCCCCCCCccc-eeccCCcEEEEEecCCcccccCcccccCCCCCcEEec
Q 008026 142 ----------------V-KLMGYPQRFAENWKGNDPCSDWIG-VTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLIL 203 (580)
Q Consensus 142 ----------------~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l 203 (580)
+ .....+..+....+.++....++. .+..+.+|+.|+|++|++.+..|..|..+++|+.|+|
T Consensus 224 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 303 (477)
T 2id5_A 224 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 303 (477)
T ss_dssp CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEEC
T ss_pred ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEEC
Confidence 0 112334455555666666655433 4667789999999999999999999999999999999
Q ss_pred cCCcccccCCccCcCCCCCCEEEccCCcccccCCCC-C--CCceeecCCCCCCCCCC
Q 008026 204 ADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSF-K--SNAIVNTDGNPDIGKEK 257 (580)
Q Consensus 204 s~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~-~--~~~~~~~~~n~~~c~~~ 257 (580)
++|+|++..+..+..+++|+.|+|++|++....+.. + ......+.++...|..+
T Consensus 304 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 304 SGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred CCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 999999655567889999999999999998543211 0 11124456666677543
No 298
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.88 E-value=9.2e-24 Score=211.09 Aligned_cols=230 Identities=18% Similarity=0.147 Sum_probs=159.1
Q ss_pred cccccCCCCCccccccceEEecccCCCCCC-CCCchhhc-------CcccCceEecccCcCcCCCCC-C--CCCCCCcEE
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKL-GGGIDVIQ-------NMTSLKEIWLHSNAFSGPLPD-F--SGVKQLESL 70 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~p~-~--~~l~~L~~L 70 (580)
|++ .+|..+.. . |+.++++.|.+. ...|..+. ++++|++|+|++|++++..|. + ..+++|++|
T Consensus 53 n~l--~~p~~~~~-~---L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L 126 (312)
T 1wwl_A 53 DTE--ADLGQFTD-I---IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNIL 126 (312)
T ss_dssp CTT--CCCHHHHH-H---HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEE
T ss_pred ccc--ccHHHHHH-H---HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEE
Confidence 444 66776631 1 555566666553 23444444 688888888888888877763 4 678888888
Q ss_pred eccCCcccccCCccccCC-----CCCcEEEccCCcccccCC-CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHh
Q 008026 71 SLRDNFFTGPVPDSLVKL-----ESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKL 144 (580)
Q Consensus 71 ~L~~N~l~~~~P~~~~~l-----~~L~~L~L~~N~l~~~~~-~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~ 144 (580)
+|++|++++. |..++.+ ++|++|+|++|++++.+| .+..+.+|+.|++++|.+... ..+...
T Consensus 127 ~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----------~~~~~~ 194 (312)
T 1wwl_A 127 NLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGE-----------RGLISA 194 (312)
T ss_dssp EEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHH-----------HHHHHH
T ss_pred EccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcc-----------hHHHHH
Confidence 8888888854 7777777 888888888888888875 477888888888888875321 011111
Q ss_pred h--CCccccccccCCCCCCCCccc----eeccCCcEEEEEecCCcccccCc-ccccCCCCCcEEeccCCcccccCCccCc
Q 008026 145 M--GYPQRFAENWKGNDPCSDWIG----VTCTKGNITVINFQKMNLTGTIS-PEFASFKSLQRLILADNNLSGMIPEGLS 217 (580)
Q Consensus 145 ~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~L~~L~ls~n~l~~~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~l~ 217 (580)
. ..+..+....+.++....++. .+..+++|+.|+|++|++.+.+| ..+..+++|+.|+|++|+|+ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 1 334455555555555553322 22345688999999999987665 45667888999999999998 8888777
Q ss_pred CCCCCCEEEccCCcccccCCCCCC---CceeecCCCCCC
Q 008026 218 VLGALKELDVSNNQLYGKIPSFKS---NAIVNTDGNPDI 253 (580)
Q Consensus 218 ~l~~L~~l~ls~N~l~g~~p~~~~---~~~~~~~~n~~~ 253 (580)
++|++|||++|++++. |.+.. ...+++++|++.
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTT
T ss_pred --CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCC
Confidence 8899999999999876 55322 234778888764
No 299
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.3e-21 Score=189.16 Aligned_cols=176 Identities=20% Similarity=0.200 Sum_probs=145.0
Q ss_pred cccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcc
Q 008026 23 NGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLL 101 (580)
Q Consensus 23 ~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l 101 (580)
++++++ .++.+|..+. ++|++|+|++|.+++..+ .|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++
T Consensus 19 l~~~~~-~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 95 (251)
T 3m19_A 19 VDCQGK-SLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95 (251)
T ss_dssp EECTTC-CCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EecCCC-CccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcc
Confidence 444444 4455665554 589999999999998887 588899999999999999976666799999999999999999
Q ss_pred cccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEec
Q 008026 102 QGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQ 180 (580)
Q Consensus 102 ~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls 180 (580)
++.++. |..+.+|+.|++++|.+..+++..+. .+.+|+.|+|+
T Consensus 96 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~------------------------------------~l~~L~~L~Ls 139 (251)
T 3m19_A 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFD------------------------------------RLTKLKELRLN 139 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------------------TCTTCCEEECC
T ss_pred cccChhHhcccCCCCEEEcCCCcCCCcChhHhc------------------------------------cCCcccEEECc
Confidence 988876 67888999999999998877765432 23489999999
Q ss_pred CCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 181 KMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 181 ~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
+|++++..|..|+.+++|+.|+|++|+|++..|..+..+++|+.|+|++|++++..+
T Consensus 140 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 140 TNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 999996666678999999999999999996666788999999999999999987644
No 300
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.87 E-value=3.1e-22 Score=218.90 Aligned_cols=135 Identities=19% Similarity=0.089 Sum_probs=92.0
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++..|..| .+++.|+.+++++|.+.+..|.+|.++++|++|+|++|.+++..| .|.++++|++|+|++|++.+.
T Consensus 42 n~l~~~~~~~~--~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 119 (606)
T 3vq2_A 42 NPLKILKSYSF--SNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASL 119 (606)
T ss_dssp SCCCEECTTTT--TTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCS
T ss_pred CCcCEeChhhc--cCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccc
Confidence 55555555566 456677777777776666666677777777777777777777666 477777777777777777744
Q ss_pred CCccccCCCCCcEEEccCCcccc--cCCCCCcccccccccccCCCCCCCCCCCchhHHHH
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQG--PVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNAL 138 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l 138 (580)
.|..|+++++|+.|+|++|++++ .+..+..+.+|+.|++++|.+..+++..+..+..+
T Consensus 120 ~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 179 (606)
T 3vq2_A 120 ESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLREN 179 (606)
T ss_dssp SSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHC
T ss_pred cccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhcc
Confidence 44567777777777777777765 23346777777777777777777666555544433
No 301
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.87 E-value=1.6e-22 Score=229.18 Aligned_cols=133 Identities=17% Similarity=0.092 Sum_probs=107.8
Q ss_pred CcccccCCCCCccccccceEEecccCCCCCCCCC-chhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccc
Q 008026 1 MLQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGG-IDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFT 78 (580)
Q Consensus 1 ~~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~ 78 (580)
.|++++..|..| .++..|+.+++++|.....+ |.+|.++++|++|+|++|.|++..| .|.++++|++|+|++|++.
T Consensus 33 ~N~i~~i~~~~~--~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 110 (844)
T 3j0a_A 33 FNYIRTVTASSF--PFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLS 110 (844)
T ss_dssp SCCCCEECSSSC--SSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCS
T ss_pred CCcCCccChhHC--cccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCC
Confidence 367777778888 56788888888888555544 6788999999999999999998877 5888999999999999998
Q ss_pred ccCCcc--ccCCCCCcEEEccCCcccccCC--CCCcccccccccccCCCCCCCCCCCchhH
Q 008026 79 GPVPDS--LVKLESLKIVNMTNNLLQGPVP--EFDRSVSLDMAKGSNNFCLPSPGACDPRL 135 (580)
Q Consensus 79 ~~~P~~--~~~l~~L~~L~L~~N~l~~~~~--~~~~~~~L~~l~l~~n~~~~~~~~~~~~l 135 (580)
+.+|.. |.++++|+.|+|++|.+++..+ .|..+.+|+.|++++|.+..+.+..+..+
T Consensus 111 ~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 111 DAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred cccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 777766 8899999999999999988765 47888899999999998877765554443
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.87 E-value=2.1e-22 Score=200.79 Aligned_cols=218 Identities=17% Similarity=0.110 Sum_probs=166.7
Q ss_pred cccccCCCCC-ccccccceEEecccCCCCCCCC--CchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCccc
Q 008026 2 LQLIGGLPAS-FSGSQIQSLWVNGQNGNAKLGG--GIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFT 78 (580)
Q Consensus 2 ~~~~~~~P~~-~~~~~l~~L~~~~~~~n~~~~~--~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~ 78 (580)
|++. .+|.. | .++..|+.+++++|.+... .+..+..+++|++|+|++|.+++.++.+..+++|+.|+|++|++.
T Consensus 38 n~l~-~i~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~ 114 (306)
T 2z66_A 38 NKLQ-SLPHGVF--DKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK 114 (306)
T ss_dssp SCCC-CCCTTTT--TTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEE
T ss_pred CccC-ccCHhHh--hccccCCEEECCCCccCcccCcccccccccccCEEECCCCccccChhhcCCCCCCCEEECCCCccc
Confidence 4454 56654 5 4577788888888866533 256677888899999999988866556788888999999988888
Q ss_pred ccCC-ccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCC-CCCCCchhHHHHHHHHHhhCCcccccccc
Q 008026 79 GPVP-DSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLP-SPGACDPRLNALLSVVKLMGYPQRFAENW 155 (580)
Q Consensus 79 ~~~P-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 155 (580)
+..+ ..+..+++|+.|+|++|++++.++. +..+.+|+.|++++|.+.. ..+..+.. +..+....
T Consensus 115 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-------------l~~L~~L~ 181 (306)
T 2z66_A 115 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE-------------LRNLTFLD 181 (306)
T ss_dssp SSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-------------CTTCCEEE
T ss_pred ccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhh-------------CcCCCEEE
Confidence 4333 4688888899999988888887775 6778888888888888765 22333222 23344444
Q ss_pred CCCCCCCCc-cceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCC-CCCEEEccCCccc
Q 008026 156 KGNDPCSDW-IGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLG-ALKELDVSNNQLY 233 (580)
Q Consensus 156 ~~~~~~~~~-~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~-~L~~l~ls~N~l~ 233 (580)
+.++..... +..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.+..|..+..++ +|++|+|++|+++
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 555555443 44566678999999999999977777899999999999999999999999999995 9999999999998
Q ss_pred cc
Q 008026 234 GK 235 (580)
Q Consensus 234 g~ 235 (580)
+.
T Consensus 262 ~~ 263 (306)
T 2z66_A 262 CT 263 (306)
T ss_dssp CS
T ss_pred cc
Confidence 65
No 303
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=1.2e-21 Score=191.61 Aligned_cols=200 Identities=18% Similarity=0.156 Sum_probs=167.1
Q ss_pred cceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEc
Q 008026 17 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNM 96 (580)
Q Consensus 17 l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L 96 (580)
+..+..+++..+.+... ..+..+++|+.|++++|.++ .++.+..+++|++|+|++|++.+ + +.+..+++|++|+|
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCTTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEEC
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-cccccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEEC
Confidence 34455555555544332 34678999999999999998 45678889999999999999994 5 48999999999999
Q ss_pred cCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEE
Q 008026 97 TNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNIT 175 (580)
Q Consensus 97 ~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 175 (580)
++|.+++.++. +..+.+|+.|++++|.+..+++..+. .+++|+
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------------------------------------~l~~L~ 136 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFD------------------------------------KLTNLT 136 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT------------------------------------TCTTCC
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhc------------------------------------cCCCCC
Confidence 99999999886 68899999999999999887765432 334899
Q ss_pred EEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC----CceeecCCCC
Q 008026 176 VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS----NAIVNTDGNP 251 (580)
Q Consensus 176 ~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~ 251 (580)
.|++++|++++..|..++.+++|+.|+|++|++++..|..+..+++|++|++++|++++..|..+. ...+++.+|+
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 999999999977777789999999999999999976677789999999999999999988876543 3468999999
Q ss_pred CCCCCC
Q 008026 252 DIGKEK 257 (580)
Q Consensus 252 ~~c~~~ 257 (580)
+.|.++
T Consensus 217 ~~~~~~ 222 (272)
T 3rfs_A 217 WDCTCP 222 (272)
T ss_dssp BCCCTT
T ss_pred ccccCc
Confidence 998765
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.87 E-value=4.2e-22 Score=209.72 Aligned_cols=217 Identities=17% Similarity=0.102 Sum_probs=184.5
Q ss_pred CcccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCcccc
Q 008026 1 MLQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTG 79 (580)
Q Consensus 1 ~~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~ 79 (580)
.|++++..|..| .++..|+.+++++|++....+..|.++++|++|+|++|+|++.++. |.++++|++|+|++|+|..
T Consensus 84 ~n~i~~~~~~~~--~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 161 (452)
T 3zyi_A 84 ENNIQMIQADTF--RHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIES 161 (452)
T ss_dssp SSCCCEECTTTT--TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCE
T ss_pred CCcCceECHHHc--CCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcce
Confidence 377888888889 6788999999999988888889999999999999999999988875 8889999999999999994
Q ss_pred cCCccccCCCCCcEEEccC-CcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCC
Q 008026 80 PVPDSLVKLESLKIVNMTN-NLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKG 157 (580)
Q Consensus 80 ~~P~~~~~l~~L~~L~L~~-N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 157 (580)
..+..|.++++|+.|+|++ |.+..+++. |..+.+|+.|++++|.+..+|.. ..+..+....+.
T Consensus 162 ~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~---------------~~l~~L~~L~Ls 226 (452)
T 3zyi_A 162 IPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL---------------TPLVGLEELEMS 226 (452)
T ss_dssp ECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCC---------------TTCTTCCEEECT
T ss_pred eCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccc---------------cccccccEEECc
Confidence 4445799999999999999 566666654 88999999999999999988631 223445555566
Q ss_pred CCCCCCc-cceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccc
Q 008026 158 NDPCSDW-IGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 158 ~~~~~~~-~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
++....+ ++.+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++..
T Consensus 227 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 6666554 5667788899999999999999889999999999999999999996666778899999999999999873
No 305
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.87 E-value=8.2e-23 Score=204.20 Aligned_cols=205 Identities=13% Similarity=0.085 Sum_probs=153.9
Q ss_pred ccceEEecccCCCCCCCCCchhh--cCcccCceEecccCcCcCCCCCCCCC-----CCCcEEeccCCcccccCCccccCC
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVI--QNMTSLKEIWLHSNAFSGPLPDFSGV-----KQLESLSLRDNFFTGPVPDSLVKL 88 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~l-----~~L~~L~L~~N~l~~~~P~~~~~l 88 (580)
++..|+.+++++|.+.+..|..+ .++++|++|+|++|+|++.++.+..+ ++|++|+|++|++.+..|..|+.+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 46677777777787777777765 88889999999999988873345555 888999999999886666788889
Q ss_pred CCCcEEEccCCccccc---CCCC--CcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCC
Q 008026 89 ESLKIVNMTNNLLQGP---VPEF--DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD 163 (580)
Q Consensus 89 ~~L~~L~L~~N~l~~~---~~~~--~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (580)
++|+.|+|++|++.+. ++.+ ..+.+|+.|++++|.+..++. +. ......+..+....++++....
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~--~~~~~~l~~L~~L~Ls~N~l~~ 242 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSG--------VC--SALAAARVQLQGLDLSHNSLRD 242 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHH--------HH--HHHHHTTCCCSEEECTTSCCCS
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHH--------HH--HHHHhcCCCCCEEECCCCcCCc
Confidence 9999999999988764 3333 778888888998888763321 00 0111123344455555555554
Q ss_pred cc--ceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccccc
Q 008026 164 WI--GVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 235 (580)
Q Consensus 164 ~~--~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ 235 (580)
.+ .....+++|+.|+|++|+++ .+|..+. ++|++|+|++|+|++ +|. +..+++|++|++++|++++.
T Consensus 243 ~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~-~p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 243 AAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDR-NPS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp SCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCS-CCC-TTTSCEEEEEECTTCTTTCC
T ss_pred ccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCC-Chh-HhhCCCCCEEeccCCCCCCC
Confidence 33 23334679999999999999 8998887 899999999999994 577 99999999999999999863
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.87 E-value=6.5e-22 Score=207.58 Aligned_cols=215 Identities=16% Similarity=0.096 Sum_probs=182.8
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++.+..|..| .++..|+.+++++|.+....+..|.++++|++|+|++|+|++.++ .|..+++|+.|+|++|+|...
T Consensus 74 n~i~~~~~~~~--~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 151 (440)
T 3zyj_A 74 NQIQIIKVNSF--KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESI 151 (440)
T ss_dssp CCCCEECTTTT--SSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEE
T ss_pred CcCCeeCHHHh--hCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCccccc
Confidence 67777777888 678899999999998888888999999999999999999998887 489999999999999999954
Q ss_pred CCccccCCCCCcEEEccCC-cccccCC-CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCC
Q 008026 81 VPDSLVKLESLKIVNMTNN-LLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGN 158 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N-~l~~~~~-~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 158 (580)
.+..|.++++|+.|+|++| .+..+++ .|..+.+|+.|++++|.+..+|.. ..+..+....+.+
T Consensus 152 ~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~---------------~~l~~L~~L~Ls~ 216 (440)
T 3zyj_A 152 PSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL---------------TPLIKLDELDLSG 216 (440)
T ss_dssp CTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCC---------------TTCSSCCEEECTT
T ss_pred CHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccccc---------------CCCcccCEEECCC
Confidence 4557999999999999995 5665555 388999999999999999988731 2234455555666
Q ss_pred CCCCCc-cceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccc
Q 008026 159 DPCSDW-IGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 159 ~~~~~~-~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~ 233 (580)
+....+ ++.+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++.
T Consensus 217 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 217 NHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 666554 556777889999999999999988999999999999999999999666677899999999999999987
No 307
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.86 E-value=3.1e-22 Score=212.21 Aligned_cols=215 Identities=15% Similarity=0.056 Sum_probs=163.4
Q ss_pred cceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEc
Q 008026 17 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNM 96 (580)
Q Consensus 17 l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L 96 (580)
...|+.+++++|.+....|..|.++++|++|+|++|.|++.+| |..+++|++|+|++|.|+ .+|. .++|+.|+|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~-~l~~----~~~L~~L~L 106 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQ-ELLV----GPSIETLHA 106 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEE-EEEE----CTTCCEEEC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCC-CCCC----CCCcCEEEC
Confidence 4478888888888888777899999999999999999998776 888999999999999998 4443 388999999
Q ss_pred cCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCC-ccceec-cCCcE
Q 008026 97 TNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD-WIGVTC-TKGNI 174 (580)
Q Consensus 97 ~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~L 174 (580)
++|.+++.++. .+.+|+.|++++|.+..+++..+..+ ..+....++++.... .+..++ .+++|
T Consensus 107 ~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l-------------~~L~~L~Ls~N~l~~~~~~~l~~~l~~L 171 (487)
T 3oja_A 107 ANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCR-------------SRVQYLDLKLNEIDTVNFAELAASSDTL 171 (487)
T ss_dssp CSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGG-------------SSEEEEECTTSCCCEEEGGGGGGGTTTC
T ss_pred cCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCC-------------CCCCEEECCCCCCCCcChHHHhhhCCcc
Confidence 99999988775 34678899999999888766554333 233444455555544 233343 56788
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC----CceeecCCC
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS----NAIVNTDGN 250 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n 250 (580)
+.|+|++|.+++. |. +..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|++++ +|..+. ...+++++|
T Consensus 172 ~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N 247 (487)
T 3oja_A 172 EHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGN 247 (487)
T ss_dssp CEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTC
T ss_pred cEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCC
Confidence 8888888888854 33 4468888899999998884 55568888889999999998886 454432 345788888
Q ss_pred CCCCCC
Q 008026 251 PDIGKE 256 (580)
Q Consensus 251 ~~~c~~ 256 (580)
++.|++
T Consensus 248 ~l~c~~ 253 (487)
T 3oja_A 248 GFHCGT 253 (487)
T ss_dssp CBCHHH
T ss_pred CCcCcc
Confidence 888754
No 308
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=4.6e-21 Score=185.18 Aligned_cols=176 Identities=19% Similarity=0.140 Sum_probs=152.5
Q ss_pred ccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCC-CCccccccccccc
Q 008026 42 TSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGS 120 (580)
Q Consensus 42 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~ 120 (580)
.+.++++++++.++..++.+. ++|+.|+|++|++.+..|..|.++++|++|+|++|++++.++. +..+.+|+.|+++
T Consensus 14 ~~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 14 EGKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 467899999999997766654 6899999999999977777899999999999999999998886 7889999999999
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcE
Q 008026 121 NNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQR 200 (580)
Q Consensus 121 ~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~ 200 (580)
+|.+..+++..+. .+++|+.|+|++|++++..+..|..+++|+.
T Consensus 92 ~n~l~~~~~~~~~------------------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 135 (251)
T 3m19_A 92 NNQLASLPLGVFD------------------------------------HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKE 135 (251)
T ss_dssp TSCCCCCCTTTTT------------------------------------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCcccccChhHhc------------------------------------ccCCCCEEEcCCCcCCCcChhHhccCCcccE
Confidence 9999988765542 2348999999999999666666899999999
Q ss_pred EeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC----CceeecCCCCCCCC
Q 008026 201 LILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS----NAIVNTDGNPDIGK 255 (580)
Q Consensus 201 L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~c~ 255 (580)
|+|++|+|++..|..+..+++|++|+|++|++++..|..+. ...+++.+|++.|.
T Consensus 136 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 136 LRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred EECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999966566899999999999999999987775543 34689999999987
No 309
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=7.3e-22 Score=189.34 Aligned_cols=191 Identities=16% Similarity=0.160 Sum_probs=151.0
Q ss_pred ccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCc-CcCCCC-CCCCCCCCcEEeccC-CcccccC
Q 008026 5 IGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA-FSGPLP-DFSGVKQLESLSLRD-NFFTGPV 81 (580)
Q Consensus 5 ~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~L~~-N~l~~~~ 81 (580)
...+|. +. . .|+.+++++|++.+..+..|.++++|++|+|++|+ +++..+ .|.++++|++|+|++ |++++..
T Consensus 23 l~~ip~-~~-~---~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 23 IQRIPS-LP-P---STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp CSSCCC-CC-T---TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC
T ss_pred ccccCC-CC-C---cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC
Confidence 356777 63 2 45555666676666656689999999999999997 887776 588899999999998 9999544
Q ss_pred CccccCCCCCcEEEccCCcccccCCCCCcccccc---cccccCC-CCCCCCCCCchhHHHHHHHHHhhCCccccccccCC
Q 008026 82 PDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLD---MAKGSNN-FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKG 157 (580)
Q Consensus 82 P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~---~l~l~~n-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 157 (580)
|..|.++++|+.|+|++|++++.++ +..+.+|+ .|++++| .+..+++..+.
T Consensus 98 ~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~------------------------ 152 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQ------------------------ 152 (239)
T ss_dssp TTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTT------------------------
T ss_pred HHHhCCCCCCCEEeCCCCCCccccc-cccccccccccEEECCCCcchhhcCccccc------------------------
Confidence 5679999999999999999998554 88888887 9999999 88877765442
Q ss_pred CCCCCCccceeccCCcEE-EEEecCCcccccCcccccCCCCCcEEeccCCc-ccccCCccCcCC-CCCCEEEccCCcccc
Q 008026 158 NDPCSDWIGVTCTKGNIT-VINFQKMNLTGTISPEFASFKSLQRLILADNN-LSGMIPEGLSVL-GALKELDVSNNQLYG 234 (580)
Q Consensus 158 ~~~~~~~~~~~~~~~~L~-~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~l~~l-~~L~~l~ls~N~l~g 234 (580)
.+++|+ .|++++|+++ .+|......++|+.|+|++|+ +++..+..+..+ ++|+.|++++|++++
T Consensus 153 ------------~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 153 ------------GLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp ------------TTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred ------------chhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 234899 9999999999 677765555899999999995 885556778888 999999999999986
Q ss_pred cCCC
Q 008026 235 KIPS 238 (580)
Q Consensus 235 ~~p~ 238 (580)
..+.
T Consensus 220 l~~~ 223 (239)
T 2xwt_C 220 LPSK 223 (239)
T ss_dssp CCCT
T ss_pred CChh
Confidence 5444
No 310
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.86 E-value=2.4e-21 Score=214.80 Aligned_cols=226 Identities=18% Similarity=0.091 Sum_probs=137.3
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++..|..| .++..|+.+++++|.+.+..|+.|.++++|++|+|++|.+++.++ .|.++++|++|+|++|++.+.
T Consensus 35 n~l~~~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~ 112 (680)
T 1ziw_A 35 NQLRRLPAANF--TRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 112 (680)
T ss_dssp SCCCCCCGGGG--GGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CCCCCcCHHHH--hCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCcc
Confidence 44555444456 446666666666676666666677777777777777777776655 367777777777777777744
Q ss_pred CCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCC
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGND 159 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 159 (580)
.|..|+++++|+.|+|++|.+++.+|. +..+.+|+.|++++|.+..+++..+..+ ....+....+.++
T Consensus 113 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~-----------~~~~L~~L~L~~n 181 (680)
T 1ziw_A 113 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIF-----------ANSSLKKLELSSN 181 (680)
T ss_dssp CSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGG-----------TTCEESEEECTTC
T ss_pred ChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhcc-----------ccccccEEECCCC
Confidence 445677777777777777777776654 5666777777777776665543211100 0112222222333
Q ss_pred CCCCcc-ceec---------------------------cCCcEEEEEecCCcccccCcccccCCCC--CcEEeccCCccc
Q 008026 160 PCSDWI-GVTC---------------------------TKGNITVINFQKMNLTGTISPEFASFKS--LQRLILADNNLS 209 (580)
Q Consensus 160 ~~~~~~-~~~~---------------------------~~~~L~~L~ls~n~l~~~~p~~~~~l~~--L~~L~ls~N~l~ 209 (580)
.....+ +.+. ...+|+.|++++|.+.+..|..+.+++. |+.|+|++|++.
T Consensus 182 ~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~ 261 (680)
T 1ziw_A 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLN 261 (680)
T ss_dssp CCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCC
T ss_pred cccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcC
Confidence 222211 1111 1135666677777777666666666654 777777777777
Q ss_pred ccCCccCcCCCCCCEEEccCCcccccCCCCC
Q 008026 210 GMIPEGLSVLGALKELDVSNNQLYGKIPSFK 240 (580)
Q Consensus 210 g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~ 240 (580)
+..|..+..+++|++|++++|++++.+|..+
T Consensus 262 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (680)
T 1ziw_A 262 VVGNDSFAWLPQLEYFFLEYNNIQHLFSHSL 292 (680)
T ss_dssp EECTTTTTTCTTCCEEECCSCCBSEECTTTT
T ss_pred ccCcccccCcccccEeeCCCCccCccChhhh
Confidence 6666677777777777777777776666544
No 311
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.85 E-value=5.3e-22 Score=215.43 Aligned_cols=238 Identities=14% Similarity=0.078 Sum_probs=170.9
Q ss_pred ccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCc---------------------CCCCCC
Q 008026 3 QLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS---------------------GPLPDF 61 (580)
Q Consensus 3 ~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~---------------------~~~p~~ 61 (580)
.+.+.+|+.| ..+..|+.++++.|.+. .+|+.+..+ +|++|++++|.+. +..+.
T Consensus 269 ~~~~~~~~~~--~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~- 343 (570)
T 2z63_A 269 YYLDDIIDLF--NCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE- 343 (570)
T ss_dssp EEESCSTTTT--GGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC-
T ss_pred hhhhhchhhh--cCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCcccccccCEEeCcCCcccccccc-
Confidence 4456666666 33444444444444333 355555544 5555555555544 33322
Q ss_pred CCCCCCcEEeccCCcccccC--CccccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCC-CCchhHHHH
Q 008026 62 SGVKQLESLSLRDNFFTGPV--PDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPG-ACDPRLNAL 138 (580)
Q Consensus 62 ~~l~~L~~L~L~~N~l~~~~--P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~-~~~~~l~~l 138 (580)
..+++|+.|+|++|++++.. |..+.++++|+.|+|++|.+++.++.+..+.+|+.|++++|.+...++ ..+..+
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l--- 420 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL--- 420 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTC---
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcC---
Confidence 45788888888888887433 677888888888888888888887778888888888888888776654 233222
Q ss_pred HHHHHhhCCccccccccCCCCCCCC-ccceeccCCcEEEEEecCCccc-ccCcccccCCCCCcEEeccCCcccccCCccC
Q 008026 139 LSVVKLMGYPQRFAENWKGNDPCSD-WIGVTCTKGNITVINFQKMNLT-GTISPEFASFKSLQRLILADNNLSGMIPEGL 216 (580)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~L~ls~n~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l 216 (580)
..+....+.++.... .+..+..+++|+.|++++|++. +.+|..+..+++|++|+|++|++++..|..+
T Consensus 421 ----------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~ 490 (570)
T 2z63_A 421 ----------RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 490 (570)
T ss_dssp ----------TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ----------CCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhh
Confidence 223333333333322 3445666789999999999998 6899999999999999999999998889999
Q ss_pred cCCCCCCEEEccCCcccccCCCCCC----CceeecCCCCCCCCCCC
Q 008026 217 SVLGALKELDVSNNQLYGKIPSFKS----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 217 ~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~c~~~~ 258 (580)
..+++|++|++++|++++.+|..+. ...+++.+|++.|.|+.
T Consensus 491 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 491 NSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 9999999999999999998887653 34689999999998764
No 312
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.85 E-value=6.8e-22 Score=197.36 Aligned_cols=198 Identities=18% Similarity=0.164 Sum_probs=128.3
Q ss_pred EEecccCCCCCCCCCchhh--cCcccCceEecccCcCcCCCCC-----CCCCCCCcEEeccCCcccccCCccccCCCCCc
Q 008026 20 LWVNGQNGNAKLGGGIDVI--QNMTSLKEIWLHSNAFSGPLPD-----FSGVKQLESLSLRDNFFTGPVPDSLVKLESLK 92 (580)
Q Consensus 20 L~~~~~~~n~~~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~-----~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~ 92 (580)
|+.+++++|.+.+..|..+ .++++|++|+|++|.+++..+. +..+++|++|+|++|++.+..|..|+.+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 4555555555555555555 5666666666666666654431 23456666666666666544445566666666
Q ss_pred EEEccCCcccc---cCCC--CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccce
Q 008026 93 IVNMTNNLLQG---PVPE--FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGV 167 (580)
Q Consensus 93 ~L~L~~N~l~~---~~~~--~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (580)
.|+|++|++.+ .++. +..+.+|+.|++++|.+..+++.. .. .
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~----~~-----------------------------l 219 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVC----AA-----------------------------L 219 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHH----HH-----------------------------H
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHH----HH-----------------------------H
Confidence 66666666544 2222 245556666666666553222100 00 1
Q ss_pred eccCCcEEEEEecCCcccccCcccccCC---CCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccc-cCCCCCC-C
Q 008026 168 TCTKGNITVINFQKMNLTGTISPEFASF---KSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG-KIPSFKS-N 242 (580)
Q Consensus 168 ~~~~~~L~~L~ls~n~l~~~~p~~~~~l---~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g-~~p~~~~-~ 242 (580)
+..+++|+.|+|++|++.+.+|+.++.+ ++|++|+|++|+|+ .+|..+. ++|++|||++|++++ +.+..+. .
T Consensus 220 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~L 296 (310)
T 4glp_A 220 AAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPEV 296 (310)
T ss_dssp HHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCCC
T ss_pred HhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCCc
Confidence 2334689999999999998889888887 69999999999999 8898885 899999999999997 3444332 3
Q ss_pred ceeecCCCCCC
Q 008026 243 AIVNTDGNPDI 253 (580)
Q Consensus 243 ~~~~~~~n~~~ 253 (580)
..+++++|++.
T Consensus 297 ~~L~L~~N~l~ 307 (310)
T 4glp_A 297 DNLTLDGNPFL 307 (310)
T ss_dssp SCEECSSTTTS
T ss_pred cEEECcCCCCC
Confidence 46888899864
No 313
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.85 E-value=2.9e-21 Score=209.12 Aligned_cols=117 Identities=16% Similarity=0.085 Sum_probs=84.2
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|+|++ +|..+. ..|+.+++++|.+.+..+..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+ .
T Consensus 41 ~~L~~-ip~~~~----~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 114 (562)
T 3a79_B 41 RNLTH-VPKDLP----PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-N 114 (562)
T ss_dssp SCCCS-CCTTSC----TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-E
T ss_pred CCCcc-CCCCCC----CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-c
Confidence 44553 777662 455556666676666666778888888888888888887766 4777888888888888887 6
Q ss_pred CCccccCCCCCcEEEccCCcccccC--CCCCcccccccccccCCCCCC
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGPV--PEFDRSVSLDMAKGSNNFCLP 126 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~L~~l~l~~n~~~~ 126 (580)
+|.. .+++|++|+|++|++++.+ ..+..+.+|+.|++++|.+..
T Consensus 115 lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 115 ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 7766 7788888888888887744 247777777777777777654
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.85 E-value=4e-22 Score=199.67 Aligned_cols=216 Identities=15% Similarity=0.060 Sum_probs=162.2
Q ss_pred ccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
.+..|+.+++++|++....|..|.++++|++|+|++|.+++.+| +..+++|++|+|++|+++ .+| .+++|+.|+
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~-~l~----~~~~L~~L~ 105 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQ-ELL----VGPSIETLH 105 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEE-EEE----ECTTCCEEE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCccc-ccc----CCCCcCEEE
Confidence 35577888888888877777889999999999999999987666 888999999999999998 444 348889999
Q ss_pred ccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCcc-cee-ccCCc
Q 008026 96 MTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWI-GVT-CTKGN 173 (580)
Q Consensus 96 L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~ 173 (580)
+++|++++.++.. +.+|+.|++++|.+..+++..+..+. .+....+.++.....+ ..+ ..+++
T Consensus 106 l~~n~l~~~~~~~--~~~L~~L~l~~N~l~~~~~~~~~~l~-------------~L~~L~Ls~N~l~~~~~~~~~~~l~~ 170 (317)
T 3o53_A 106 AANNNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRS-------------RVQYLDLKLNEIDTVNFAELAASSDT 170 (317)
T ss_dssp CCSSCCSEEEECC--CSSCEEEECCSSCCCSGGGBCTGGGS-------------SEEEEECTTSCCCEEEGGGGGGGTTT
T ss_pred CCCCccCCcCccc--cCCCCEEECCCCCCCCccchhhhccC-------------CCCEEECCCCCCCcccHHHHhhccCc
Confidence 9999888877653 46788889999988887665544332 3344444555544432 222 24678
Q ss_pred EEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCC----CCceeecCC
Q 008026 174 ITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFK----SNAIVNTDG 249 (580)
Q Consensus 174 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~----~~~~~~~~~ 249 (580)
|+.|+|++|++++ +|. ...+++|++|+|++|+++ .+|..+..+++|+.|++++|++++ +|..+ ....+++++
T Consensus 171 L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~ 246 (317)
T 3o53_A 171 LEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRG 246 (317)
T ss_dssp CCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTT
T ss_pred CCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccC
Confidence 9999999999884 443 345889999999999998 566678889999999999999985 45443 234588889
Q ss_pred CCCCCCC
Q 008026 250 NPDIGKE 256 (580)
Q Consensus 250 n~~~c~~ 256 (580)
|++.|.+
T Consensus 247 N~~~~~~ 253 (317)
T 3o53_A 247 NGFHCGT 253 (317)
T ss_dssp CCCBHHH
T ss_pred CCccCcC
Confidence 9888753
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.85 E-value=1.5e-22 Score=214.68 Aligned_cols=215 Identities=16% Similarity=0.106 Sum_probs=162.4
Q ss_pred CcccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCccccc
Q 008026 1 MLQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 1 ~~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~ 80 (580)
.|++++..|..| ..+..|+.+++++|.+.+..| |..+++|++|+|++|.|++.++. ++|+.|+|++|+|++.
T Consensus 43 ~n~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~L~~N~l~~~ 114 (487)
T 3oja_A 43 GNPLSQISAADL--APFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHAANNNISRV 114 (487)
T ss_dssp SSCCCCCCGGGG--TTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEECCSSCCCCE
T ss_pred CCcCCCCCHHHH--hCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEECcCCcCCCC
Confidence 367788777888 668888999999997766544 99999999999999999976543 6788888888888743
Q ss_pred CCccccCCCCCcEEEccCCcccccCC-CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCC
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGND 159 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 159 (580)
.+. .+++|+.|+|++|.+++.+| .+..+.+|+.|++++|.+...++..+. ..+..+....+.++
T Consensus 115 ~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~------------~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 115 SCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA------------ASSDTLEHLNLQYN 179 (487)
T ss_dssp EEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG------------GGTTTCCEEECTTS
T ss_pred Ccc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh------------hhCCcccEEecCCC
Confidence 332 35778888888888887766 467777888888888877765433321 01223344445555
Q ss_pred CCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccc-ccCCC
Q 008026 160 PCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY-GKIPS 238 (580)
Q Consensus 160 ~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~-g~~p~ 238 (580)
.+...++. ..+++|+.|+|++|++++ +|+.++.+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++ +.+|.
T Consensus 180 ~l~~~~~~-~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 180 FIYDVKGQ-VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCCEEECC-CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccccccc-ccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 55444332 246799999999999995 5666999999999999999999 58999999999999999999998 66665
Q ss_pred CCC
Q 008026 239 FKS 241 (580)
Q Consensus 239 ~~~ 241 (580)
++.
T Consensus 257 ~~~ 259 (487)
T 3oja_A 257 FFS 259 (487)
T ss_dssp HHT
T ss_pred HHH
Confidence 543
No 316
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.85 E-value=8.4e-22 Score=211.38 Aligned_cols=243 Identities=19% Similarity=0.113 Sum_probs=172.7
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|+|+ .+|..+. ..|+.+++++|.+.+..|+.|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+ .
T Consensus 10 n~l~-~ip~~~~----~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 83 (520)
T 2z7x_B 10 NGLI-HVPKDLS----QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-K 83 (520)
T ss_dssp SCCS-SCCCSCC----TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-E
T ss_pred CCcc-ccccccc----ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-e
Confidence 6666 6998883 567777788888777777899999999999999999999877 6899999999999999999 7
Q ss_pred CCccccCCCCCcEEEccCCccccc-C-CCCCcccccccccccCCCCCCC-------------------------CCCCch
Q 008026 81 VPDSLVKLESLKIVNMTNNLLQGP-V-PEFDRSVSLDMAKGSNNFCLPS-------------------------PGACDP 133 (580)
Q Consensus 81 ~P~~~~~l~~L~~L~L~~N~l~~~-~-~~~~~~~~L~~l~l~~n~~~~~-------------------------~~~~~~ 133 (580)
+|.. .+++|++|+|++|++++. . ..+..+.+|+.|++++|.+... .+..+.
T Consensus 84 lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~ 161 (520)
T 2z7x_B 84 ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQ 161 (520)
T ss_dssp EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTT
T ss_pred cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeeccccccccccccccc
Confidence 8887 899999999999999984 3 4688888888888888876421 111111
Q ss_pred hHH-------------------------------------------HHHHHHHhhCCcc---------------------
Q 008026 134 RLN-------------------------------------------ALLSVVKLMGYPQ--------------------- 149 (580)
Q Consensus 134 ~l~-------------------------------------------~l~~~~~~~~~~~--------------------- 149 (580)
.+. .+.........+.
T Consensus 162 ~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~ 241 (520)
T 2z7x_B 162 DFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRIL 241 (520)
T ss_dssp TCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHH
T ss_pred ccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHH
Confidence 100 0000000000000
Q ss_pred ------ccccccCC------CCCCC----------------------Ccc------------------------ce--ec
Q 008026 150 ------RFAENWKG------NDPCS----------------------DWI------------------------GV--TC 169 (580)
Q Consensus 150 ------~~~~~~~~------~~~~~----------------------~~~------------------------~~--~~ 169 (580)
.+....+. ..|.. .+| +. ..
T Consensus 242 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 321 (520)
T 2z7x_B 242 QLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPS 321 (520)
T ss_dssp HHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCS
T ss_pred HHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchh
Confidence 00000000 00000 001 00 14
Q ss_pred cCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccc--cCCccCcCCCCCCEEEccCCcccccCCCC-C----CC
Q 008026 170 TKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSG--MIPEGLSVLGALKELDVSNNQLYGKIPSF-K----SN 242 (580)
Q Consensus 170 ~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~l~~l~~L~~l~ls~N~l~g~~p~~-~----~~ 242 (580)
.+++|+.|++++|++++.+|..++++++|++|+|++|++.+ .+|..+..+++|++|++++|++++.+|.. + ..
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 56789999999999998899999999999999999999986 56678899999999999999999866643 2 23
Q ss_pred ceeecCCCCC
Q 008026 243 AIVNTDGNPD 252 (580)
Q Consensus 243 ~~~~~~~n~~ 252 (580)
..+++++|..
T Consensus 402 ~~L~Ls~N~l 411 (520)
T 2z7x_B 402 LSLNMSSNIL 411 (520)
T ss_dssp CEEECCSSCC
T ss_pred CEEECcCCCC
Confidence 4577777754
No 317
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.84 E-value=3.5e-21 Score=184.63 Aligned_cols=186 Identities=18% Similarity=0.134 Sum_probs=157.6
Q ss_pred cccccCCCCCccccccceEEecccCCCC-CCCCCchhhcCcccCceEeccc-CcCcCCCC-CCCCCCCCcEEeccCCccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNA-KLGGGIDVIQNMTSLKEIWLHS-NAFSGPLP-DFSGVKQLESLSLRDNFFT 78 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~-~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~L~~N~l~ 78 (580)
|++++..|..| .++..|+.+++++|. +....+..|.++++|++|+|++ |+|++..+ .|.++++|+.|+|++|+++
T Consensus 41 n~l~~i~~~~~--~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~ 118 (239)
T 2xwt_C 41 THLRTIPSHAF--SNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK 118 (239)
T ss_dssp CCCSEECTTTT--TTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC
T ss_pred CcceEECHHHc--cCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc
Confidence 56666555677 567888888888887 5555556899999999999999 99998877 5889999999999999999
Q ss_pred ccCCccccCCCCCc---EEEccCC-cccccCCC-CCcccccc-cccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccc
Q 008026 79 GPVPDSLVKLESLK---IVNMTNN-LLQGPVPE-FDRSVSLD-MAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFA 152 (580)
Q Consensus 79 ~~~P~~~~~l~~L~---~L~L~~N-~l~~~~~~-~~~~~~L~-~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 152 (580)
.+|. |..+++|+ .|++++| +++++++. |..+.+|+ .|++++|.+..+|...+.
T Consensus 119 -~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~------------------- 177 (239)
T 2xwt_C 119 -MFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFN------------------- 177 (239)
T ss_dssp -SCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTT-------------------
T ss_pred -cccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcC-------------------
Confidence 5887 89999998 9999999 99999886 88899999 999999999877765432
Q ss_pred cccCCCCCCCCccceeccCCcEEEEEecCCc-ccccCcccccCC-CCCcEEeccCCcccccCCccCcCCCCCCEEEccCC
Q 008026 153 ENWKGNDPCSDWIGVTCTKGNITVINFQKMN-LTGTISPEFASF-KSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 230 (580)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~-l~~~~p~~~~~l-~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N 230 (580)
..+|+.|++++|+ +++..+..|..+ ++|+.|+|++|+++ .+|.. .+++|+.|+++++
T Consensus 178 ------------------~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 178 ------------------GTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp ------------------TCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC
T ss_pred ------------------CCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccCc
Confidence 1389999999995 996666778999 99999999999998 77765 7889999999886
Q ss_pred c
Q 008026 231 Q 231 (580)
Q Consensus 231 ~ 231 (580)
.
T Consensus 237 ~ 237 (239)
T 2xwt_C 237 W 237 (239)
T ss_dssp -
T ss_pred c
Confidence 3
No 318
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.83 E-value=4.2e-21 Score=207.38 Aligned_cols=191 Identities=16% Similarity=0.100 Sum_probs=149.7
Q ss_pred EEecccCCCCCCCCCchhh-cCcccCceEecccCcCcCCCC----CCCCCCCCcEEeccCCcccccCC---ccccCCCCC
Q 008026 20 LWVNGQNGNAKLGGGIDVI-QNMTSLKEIWLHSNAFSGPLP----DFSGVKQLESLSLRDNFFTGPVP---DSLVKLESL 91 (580)
Q Consensus 20 L~~~~~~~n~~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p----~~~~l~~L~~L~L~~N~l~~~~P---~~~~~l~~L 91 (580)
|+.+++++|.+ +.+|..+ .++++|++|+|++|++++..| .+..+++|+.|+|++|+++ .+| ..+..+++|
T Consensus 312 L~~L~l~~n~l-~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~~l~~L 389 (549)
T 2z81_A 312 VKRITVENSKV-FLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEILLTLKNL 389 (549)
T ss_dssp CCEEEEESSCC-CCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCC-CHHHHHHHGGGCTTC
T ss_pred ceEEEeccCcc-ccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCccc-ccccchhhhhcCCCC
Confidence 44455555643 4566555 578888899999988887553 2677888889999988888 444 348888889
Q ss_pred cEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccC
Q 008026 92 KIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTK 171 (580)
Q Consensus 92 ~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (580)
+.|+|++|+++.+++.+..+.+|+.|++++|.+..+++..+
T Consensus 390 ~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~--------------------------------------- 430 (549)
T 2z81_A 390 TSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIP--------------------------------------- 430 (549)
T ss_dssp CEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCCCTTSC---------------------------------------
T ss_pred CEEECCCCCCccCChhhcccccccEEECCCCCcccccchhc---------------------------------------
Confidence 99999999888777778888888888888888876654322
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC----Cceeec
Q 008026 172 GNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS----NAIVNT 247 (580)
Q Consensus 172 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~----~~~~~~ 247 (580)
.+|+.|++++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|||++|++++.+|..+. ...+++
T Consensus 431 ~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 504 (549)
T 2z81_A 431 QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWL 504 (549)
T ss_dssp TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEe
Confidence 27899999999999643 57899999999999998 8887 57899999999999999988887543 346899
Q ss_pred CCCCCCCCCC
Q 008026 248 DGNPDIGKEK 257 (580)
Q Consensus 248 ~~n~~~c~~~ 257 (580)
++|+|.|.|+
T Consensus 505 ~~N~~~~~~~ 514 (549)
T 2z81_A 505 HTNPWDCSCP 514 (549)
T ss_dssp CSSCBCCCHH
T ss_pred cCCCccCCCc
Confidence 9999999875
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.83 E-value=1.8e-21 Score=194.98 Aligned_cols=213 Identities=16% Similarity=0.121 Sum_probs=164.8
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccC
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPV 81 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 81 (580)
|++++..|..| .++..|+.+++++|.+.+..+ |..+++|++|+|++|.|++..+ +++|+.|++++|++++ +
T Consensus 44 n~l~~~~~~~~--~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~----~~~L~~L~l~~n~l~~-~ 114 (317)
T 3o53_A 44 NPLSQISAADL--APFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV----GPSIETLHAANNNISR-V 114 (317)
T ss_dssp SCCCCCCHHHH--TTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE----CTTCCEEECCSSCCSE-E
T ss_pred CccCcCCHHHh--hCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC----CCCcCEEECCCCccCC-c
Confidence 67777777788 568888888999997765443 8999999999999999997553 3788899999998884 4
Q ss_pred CccccCCCCCcEEEccCCcccccCC-CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCC
Q 008026 82 PDSLVKLESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDP 160 (580)
Q Consensus 82 P~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (580)
|.. .+++|+.|+|++|++++.++ .+..+.+|+.|++++|.+..+++..+. ..+..+....+.++.
T Consensus 115 ~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~------------~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 115 SCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA------------ASSDTLEHLNLQYNF 180 (317)
T ss_dssp EEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG------------GGTTTCCEEECTTSC
T ss_pred Ccc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh------------hccCcCCEEECCCCc
Confidence 332 36778888999998888877 477788888888888888776543221 112233444455555
Q ss_pred CCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccc-ccCCCC
Q 008026 161 CSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY-GKIPSF 239 (580)
Q Consensus 161 ~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~-g~~p~~ 239 (580)
...+++.. .+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++ +.+|.+
T Consensus 181 l~~~~~~~-~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 257 (317)
T 3o53_A 181 IYDVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (317)
T ss_dssp CCEEECCC-CCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHH
T ss_pred Cccccccc-ccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHH
Confidence 55544333 3679999999999999 56667999999999999999999 78999999999999999999999 666655
Q ss_pred C
Q 008026 240 K 240 (580)
Q Consensus 240 ~ 240 (580)
+
T Consensus 258 ~ 258 (317)
T 3o53_A 258 F 258 (317)
T ss_dssp H
T ss_pred H
Confidence 4
No 320
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.83 E-value=3.8e-21 Score=191.93 Aligned_cols=195 Identities=16% Similarity=0.087 Sum_probs=156.8
Q ss_pred CcccccCCCCCccccccceEEecccCCCCCCCCCc----hhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCC
Q 008026 1 MLQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGI----DVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDN 75 (580)
Q Consensus 1 ~~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N 75 (580)
.|++++.+|..+....+..|+.+++++|.+....+ ..+..+++|++|+|++|++++.+| .|..+++|++|+|++|
T Consensus 100 ~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 179 (310)
T 4glp_A 100 DLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDN 179 (310)
T ss_dssp SCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSC
T ss_pred CCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCC
Confidence 47888999988731247778888888888776544 345689999999999999998887 5889999999999999
Q ss_pred ccccc--CC--ccccCCCCCcEEEccCCcccccCCC----CCcccccccccccCCCCCCC-CCCCchhHHHHHHHHHhhC
Q 008026 76 FFTGP--VP--DSLVKLESLKIVNMTNNLLQGPVPE----FDRSVSLDMAKGSNNFCLPS-PGACDPRLNALLSVVKLMG 146 (580)
Q Consensus 76 ~l~~~--~P--~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~~~L~~l~l~~n~~~~~-~~~~~~~l~~l~~~~~~~~ 146 (580)
++.+. +| ..+..+++|++|+|++|+++..++. +..+.+|+.|++++|.+... |+....
T Consensus 180 ~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~------------- 246 (310)
T 4glp_A 180 PGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR------------- 246 (310)
T ss_dssp TTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS-------------
T ss_pred CCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh-------------
Confidence 98753 33 3357899999999999999865542 45778999999999999877 332210
Q ss_pred CccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEE
Q 008026 147 YPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELD 226 (580)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ 226 (580)
...+++|+.|+|++|+++ .+|..+. ++|+.|+|++|+|+ .+|. +..+++|+.|+
T Consensus 247 ---------------------~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~-~~~~-~~~l~~L~~L~ 300 (310)
T 4glp_A 247 ---------------------CMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLN-RAPQ-PDELPEVDNLT 300 (310)
T ss_dssp ---------------------CCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCC-SCCC-TTSCCCCSCEE
T ss_pred ---------------------ccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCC-CCch-hhhCCCccEEE
Confidence 001248999999999999 7898875 89999999999999 4565 78899999999
Q ss_pred ccCCcccc
Q 008026 227 VSNNQLYG 234 (580)
Q Consensus 227 ls~N~l~g 234 (580)
|++|+++.
T Consensus 301 L~~N~l~~ 308 (310)
T 4glp_A 301 LDGNPFLV 308 (310)
T ss_dssp CSSTTTSC
T ss_pred CcCCCCCC
Confidence 99999984
No 321
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=1.9e-20 Score=186.55 Aligned_cols=190 Identities=19% Similarity=0.245 Sum_probs=131.7
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
.++..|+.+++++|.+.. .+ .+..+++|++|+|++|.+++..+ +..+++|+.|+|++|+++ .+| .+..+++|+.|
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTL 112 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCC-Cch-hhcCCCCCCEE
Confidence 346667777777775544 44 68889999999999999987766 888999999999999998 555 68899999999
Q ss_pred EccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcE
Q 008026 95 NMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNI 174 (580)
Q Consensus 95 ~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 174 (580)
+|++|++++.++ +..+.+|+.|++++|.+..+++ +..+++|
T Consensus 113 ~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--------------------------------------l~~l~~L 153 (308)
T 1h6u_A 113 DLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--------------------------------------LAGLTNL 153 (308)
T ss_dssp ECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--------------------------------------GGGCTTC
T ss_pred ECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--------------------------------------ccCCCCc
Confidence 999999988654 8888899999999998876653 1122356
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC--CCCCCceeecCCCCC
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP--SFKSNAIVNTDGNPD 252 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p--~~~~~~~~~~~~n~~ 252 (580)
+.|++++|++++ ++. +..+++|+.|+|++|+++ .+|. +..+++|++|++++|++++..| .......+++++|++
T Consensus 154 ~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 154 QYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKIS-DISP-LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTI 229 (308)
T ss_dssp CEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEE
T ss_pred cEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccC-cChh-hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCee
Confidence 666666666663 333 666666666666666665 3332 5666666666666666664433 001123355555554
No 322
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.82 E-value=2e-20 Score=181.26 Aligned_cols=141 Identities=20% Similarity=0.175 Sum_probs=107.9
Q ss_pred CCcccceeeccCcEEEEEEEE-cCCcE--EEEEEeeccccCh----------------------hhHHHHHHHHHHHHhc
Q 008026 396 NFSEENILGRGGFGTVYKGEL-HDGTK--IAVKRMEAGVISG----------------------KGLTEFKSEIAVLTKV 450 (580)
Q Consensus 396 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l 450 (580)
-|++.+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|++.+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999987 67888 9999875432110 1123688999999999
Q ss_pred CCCcc--cceeeEEEcCCeeEEEEEecCC-C----ChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHH-hCCCCCc
Q 008026 451 RHRHL--VALLGHCLDGNEKLLVFEYMPQ-G----TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH-GLAHQSF 522 (580)
Q Consensus 451 ~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH-~~~~~~i 522 (580)
.|+++ +.++++ +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| + .+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~---~gi 192 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQE---AEL 192 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHT---SCE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHH---CCE
Confidence 88764 334432 356899999942 4 55544311 234567789999999999999 7 899
Q ss_pred EecCCCCCCeEecCCCcEEEEeeccccccCC
Q 008026 523 IHRDLKPSNILLGDDMRAKVADFGLVRLAPE 553 (580)
Q Consensus 523 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 553 (580)
|||||||+|||+++ .++|+|||+|.....
T Consensus 193 vHrDlkp~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 193 VHADLSEYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp ECSSCSTTSEEESS--SEEECCCTTCEETTS
T ss_pred EeCCCCHHHEEEcC--cEEEEECcccccCCC
Confidence 99999999999988 999999999987643
No 323
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.82 E-value=7.6e-20 Score=185.53 Aligned_cols=215 Identities=18% Similarity=0.139 Sum_probs=139.9
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
.++..|+.+++++|.+.. .+. +.++++|++|++++|.....++.+..+++|++|++++|.+. .++. +..+++|+.|
T Consensus 107 ~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~-~~~~-~~~l~~L~~L 182 (347)
T 4fmz_A 107 QNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVK-DVTP-IANLTDLYSL 182 (347)
T ss_dssp TTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCC-CCGG-GGGCTTCSEE
T ss_pred cCCCcCCEEECcCCcccC-chh-hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcC-Cchh-hccCCCCCEE
Confidence 456777777777776554 333 88888888888888876666667788888888888888887 4544 7888888888
Q ss_pred EccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcE
Q 008026 95 NMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNI 174 (580)
Q Consensus 95 ~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 174 (580)
++++|.+++..+ +..+.+|+.+++++|.+...++ +. .+..+....+.++.....+. +..+++|
T Consensus 183 ~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~-------------~~~~L~~L~l~~n~l~~~~~-~~~l~~L 245 (347)
T 4fmz_A 183 SLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP--VA-------------NMTRLNSLKIGNNKITDLSP-LANLSQL 245 (347)
T ss_dssp ECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GG-------------GCTTCCEEECCSSCCCCCGG-GTTCTTC
T ss_pred EccCCccccccc-ccCCCccceeecccCCCCCCch--hh-------------cCCcCCEEEccCCccCCCcc-hhcCCCC
Confidence 888888887665 6777777778887777766543 11 12223333344444444443 4455566
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCC----CCceeecCCC
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFK----SNAIVNTDGN 250 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~----~~~~~~~~~n 250 (580)
+.|++++|.+++ + +.+..+++|+.|++++|+++ .+| .+..+++|+.|++++|++++..|..+ ....+++++|
T Consensus 246 ~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~-~~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 321 (347)
T 4fmz_A 246 TWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQIS-DIS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQN 321 (347)
T ss_dssp CEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCC-CCG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSS
T ss_pred CEEECCCCccCC-C-hhHhcCCCcCEEEccCCccC-CCh-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCC
Confidence 666666666663 3 34666666666666666666 333 46666666666666666665554332 2234566666
Q ss_pred CCCC
Q 008026 251 PDIG 254 (580)
Q Consensus 251 ~~~c 254 (580)
+...
T Consensus 322 ~l~~ 325 (347)
T 4fmz_A 322 HITD 325 (347)
T ss_dssp SCCC
T ss_pred cccc
Confidence 5443
No 324
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.82 E-value=5.4e-20 Score=193.22 Aligned_cols=187 Identities=19% Similarity=0.146 Sum_probs=124.0
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
.++..|+.+++++|.+.+ .| .|..+++|++|+|++|+|++. | +..+++|++|+|++|+|++ +| ++++++|++|
T Consensus 39 ~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L 111 (457)
T 3bz5_A 39 EQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYL 111 (457)
T ss_dssp HHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEE
T ss_pred hHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCce-ee--cCCCCcCCEE
Confidence 457777777888776554 44 688888899999999888875 3 7788888899998888884 55 8888888889
Q ss_pred EccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCC-CCCccceeccCCc
Q 008026 95 NMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDP-CSDWIGVTCTKGN 173 (580)
Q Consensus 95 ~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 173 (580)
+|++|++++. | +..+.+|+.|++++|.+..++-. . +..+.......+. ...+ .+..+++
T Consensus 112 ~L~~N~l~~l-~-~~~l~~L~~L~l~~N~l~~l~l~---~-------------l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 112 NCDTNKLTKL-D-VSQNPLLTYLNCARNTLTEIDVS---H-------------NTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp ECCSSCCSCC-C-CTTCTTCCEEECTTSCCSCCCCT---T-------------CTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred ECCCCcCCee-c-CCCCCcCCEEECCCCccceeccc---c-------------CCcCCEEECCCCCccccc--ccccCCc
Confidence 9988888885 3 78888888888888888776421 1 1122222222221 1111 1334456
Q ss_pred EEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccc
Q 008026 174 ITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 174 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
|+.|++++|++++ +| ++.+++|+.|++++|++++ + .+..+++|++|++++|++++
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~-~--~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITK-L--DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSC-C--CCTTCTTCSEEECCSSCCSC
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCCcCCe-e--ccccCCCCCEEECcCCcccc
Confidence 6666666666663 44 5566666666666666653 2 25566666666666666665
No 325
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=5.7e-20 Score=172.13 Aligned_cols=172 Identities=19% Similarity=0.139 Sum_probs=136.4
Q ss_pred cCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccc
Q 008026 25 QNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG 103 (580)
Q Consensus 25 ~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~ 103 (580)
++.+. +...|..+ .++|++|+|++|++++.++. |..+++|++|+|++|++++..+..|..+++|++|+|++|++++
T Consensus 14 c~~~~-l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 90 (208)
T 2o6s_A 14 CYSQG-RTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS 90 (208)
T ss_dssp CCSSC-CSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred ecCCC-ccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCc
Confidence 44443 33445433 45899999999999977774 7889999999999999994334457889999999999999998
Q ss_pred cCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCC
Q 008026 104 PVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKM 182 (580)
Q Consensus 104 ~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n 182 (580)
.++. +..+.+|+.|++++|.+..+++..+. .+++|+.|+|++|
T Consensus 91 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~------------------------------------~l~~L~~L~l~~N 134 (208)
T 2o6s_A 91 LPNGVFDKLTQLKELALNTNQLQSLPDGVFD------------------------------------KLTQLKDLRLYQN 134 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------------------TCTTCCEEECCSS
T ss_pred cCHhHhcCccCCCEEEcCCCcCcccCHhHhc------------------------------------cCCcCCEEECCCC
Confidence 8876 67888999999999988877655432 2348999999999
Q ss_pred cccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCCC
Q 008026 183 NLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKSN 242 (580)
Q Consensus 183 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~~ 242 (580)
++++..+..+..+++|+.|+|++|.+.+ .+++|++|+++.|+++|.+|+.++.
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 135 QLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcc
Confidence 9996666668899999999999998874 4557899999999999999987654
No 326
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=6.9e-20 Score=195.99 Aligned_cols=184 Identities=18% Similarity=0.142 Sum_probs=136.5
Q ss_pred eEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccC
Q 008026 19 SLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTN 98 (580)
Q Consensus 19 ~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~ 98 (580)
.|+.+++++|.+.+ +|..+. ++|++|+|++|+|+. +| ..+++|+.|+|++|+|++ +|. +.+ +|+.|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip--~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP--ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc--cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 56666666665443 665453 678888888888884 44 446788888888888884 777 655 788888888
Q ss_pred CcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEE
Q 008026 99 NLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVIN 178 (580)
Q Consensus 99 N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ 178 (580)
|+|+++++ .+.+|+.|++++|.+..+|. . +..+....+.++.+..+|. ++ ++|+.|+
T Consensus 130 N~l~~lp~---~l~~L~~L~Ls~N~l~~lp~-~----------------l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~ 186 (571)
T 3cvr_A 130 NQLTMLPE---LPALLEYINADNNQLTMLPE-L----------------PTSLEVLSVRNNQLTFLPE-LP--ESLEALD 186 (571)
T ss_dssp SCCSCCCC---CCTTCCEEECCSSCCSCCCC-C----------------CTTCCEEECCSSCCSCCCC-CC--TTCCEEE
T ss_pred CcCCCCCC---cCccccEEeCCCCccCcCCC-c----------------CCCcCEEECCCCCCCCcch-hh--CCCCEEE
Confidence 88888554 56778888888888877665 1 1233444555565555555 43 6999999
Q ss_pred ecCCcccccCcccccCCCCC-------cEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCC
Q 008026 179 FQKMNLTGTISPEFASFKSL-------QRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFK 240 (580)
Q Consensus 179 ls~n~l~~~~p~~~~~l~~L-------~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~ 240 (580)
|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+
T Consensus 187 Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 187 VSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESL 250 (571)
T ss_dssp CCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHH
T ss_pred CcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHH
Confidence 9999999 7887 665 77 99999999999 899999999999999999999999887654
No 327
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.81 E-value=1.2e-19 Score=184.12 Aligned_cols=215 Identities=19% Similarity=0.179 Sum_probs=169.9
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
..+..|+.+++++|...+..+ .+.++++|++|++++|.+.+..+ +..+++|+.|++++|++. .++. +..+++|+.|
T Consensus 129 ~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L 204 (347)
T 4fmz_A 129 ANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIE-DISP-LASLTSLHYF 204 (347)
T ss_dssp TTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCC-CCGG-GGGCTTCCEE
T ss_pred ccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCccc-cccc-ccCCCcccee
Confidence 457778888888886666544 48999999999999999986655 788999999999999998 5665 8899999999
Q ss_pred EccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcE
Q 008026 95 NMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNI 174 (580)
Q Consensus 95 ~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 174 (580)
++++|.+++..+ +..+.+|+.|++++|.+..+++ + ..+..+....+.++....+ ..+..+++|
T Consensus 205 ~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~--~-------------~~l~~L~~L~l~~n~l~~~-~~~~~l~~L 267 (347)
T 4fmz_A 205 TAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP--L-------------ANLSQLTWLEIGTNQISDI-NAVKDLTKL 267 (347)
T ss_dssp ECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--G-------------TTCTTCCEEECCSSCCCCC-GGGTTCTTC
T ss_pred ecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc--h-------------hcCCCCCEEECCCCccCCC-hhHhcCCCc
Confidence 999999998776 7888899999999999887764 1 2233444445555555554 345667899
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC--CCCCCceeecCCCCC
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP--SFKSNAIVNTDGNPD 252 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p--~~~~~~~~~~~~n~~ 252 (580)
+.|++++|++++ + +.+..+++|+.|++++|++.+..|..+..+++|++|++++|++++..| .......+++.+|+.
T Consensus 268 ~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 268 KMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVI 345 (347)
T ss_dssp CEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC--
T ss_pred CEEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhcc
Confidence 999999999995 4 468899999999999999998888889999999999999999998766 112234577777763
No 328
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.3e-19 Score=171.01 Aligned_cols=154 Identities=16% Similarity=0.167 Sum_probs=98.2
Q ss_pred ceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCc-cccCCCCCcEEEccCCcccccCC-CCCcccccccccccCC
Q 008026 45 KEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPD-SLVKLESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNN 122 (580)
Q Consensus 45 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~-~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~L~~l~l~~n 122 (580)
+++++++|.++..++.+. ..++.|+|++|+|++..|. .|..+++|+.|+|++|+++++++ .|..+.+|+.|++++|
T Consensus 14 ~~l~~s~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEeEeCCCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 356666666654433332 2345666666666633332 25566666666666666665555 3555555555555555
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEe
Q 008026 123 FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLI 202 (580)
Q Consensus 123 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ 202 (580)
.+..+++..+ ..+++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 92 ~l~~~~~~~~------------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 92 RLENVQHKMF------------------------------------KGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CCCCCCGGGG------------------------------------TTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred ccCccCHhHh------------------------------------cCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 5444433221 1233788888888888877788888888888888
Q ss_pred ccCCcccccCCccCcCCCCCCEEEccCCcccccC
Q 008026 203 LADNNLSGMIPEGLSVLGALKELDVSNNQLYGKI 236 (580)
Q Consensus 203 ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~ 236 (580)
|++|+|++..|..+..+++|+.|+|++|++++..
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 8888888777888888888888888888777543
No 329
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=197.19 Aligned_cols=235 Identities=15% Similarity=0.087 Sum_probs=135.3
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCccccc
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 80 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~ 80 (580)
|++++..|..| .++..|+.+++++|++.+..++.|.++++|++|+|++|.+++.+| .|.++++|++|+|++|+++ .
T Consensus 38 n~l~~~~~~~~--~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~ 114 (570)
T 2z63_A 38 NPLRHLGSYSF--FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-S 114 (570)
T ss_dssp CCCCEECTTTT--TTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCC-C
T ss_pred CccCccChhHh--hCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccc-c
Confidence 44445445555 445666666666665555555666666777777777776666555 3666667777777777666 3
Q ss_pred CCc-cccCCCCCcEEEccCCccccc--CCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCC
Q 008026 81 VPD-SLVKLESLKIVNMTNNLLQGP--VPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKG 157 (580)
Q Consensus 81 ~P~-~~~~l~~L~~L~L~~N~l~~~--~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 157 (580)
+|. .|+++++|++|+|++|.+++. +..+..+.+|+.|++++|.+..+++..+..+..+... .......
T Consensus 115 l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~---------~~~L~l~ 185 (570)
T 2z63_A 115 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL---------NLSLDLS 185 (570)
T ss_dssp STTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC---------CCEEECT
T ss_pred CCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchh---------hhhcccC
Confidence 443 466677777777777766652 3346666677777777776666555444333322000 0011112
Q ss_pred CCCCCCccceeccCCcEEEEEecCC-------------------------------------------------------
Q 008026 158 NDPCSDWIGVTCTKGNITVINFQKM------------------------------------------------------- 182 (580)
Q Consensus 158 ~~~~~~~~~~~~~~~~L~~L~ls~n------------------------------------------------------- 182 (580)
++.....+.......+|+.|++++|
T Consensus 186 ~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 186 LNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp TCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 2222211111111123444444444
Q ss_pred ---cccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCC-C-CCceeecCCCC
Q 008026 183 ---NLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSF-K-SNAIVNTDGNP 251 (580)
Q Consensus 183 ---~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~-~-~~~~~~~~~n~ 251 (580)
.+.+.+|..+..+++|+.|++++|++. .+|..+..+ +|+.|++++|+++ .+|.. + ....+.+.+|.
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~ 336 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNK 336 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCB
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCc
Confidence 455566677777888888888888887 678777777 8888888888877 55542 1 22335555554
No 330
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.81 E-value=2.3e-20 Score=201.52 Aligned_cols=189 Identities=17% Similarity=0.167 Sum_probs=153.2
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCcc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 84 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~ 84 (580)
..+|..+. ..|+.+++++|.+....|..|.++++|++|+|++|+|++.+| .|.++++|++|+|++|++++..|..
T Consensus 18 ~~ip~~~~----~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 93 (549)
T 2z81_A 18 TSIPSGLT----AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSW 93 (549)
T ss_dssp SSCCSCCC----TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHH
T ss_pred ccccccCC----CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHH
Confidence 46888773 566777788888777777899999999999999999999887 5899999999999999999655556
Q ss_pred ccCCCCCcEEEccCCccccc--CCCCCcccccccccccCCC-CCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCC
Q 008026 85 LVKLESLKIVNMTNNLLQGP--VPEFDRSVSLDMAKGSNNF-CLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPC 161 (580)
Q Consensus 85 ~~~l~~L~~L~L~~N~l~~~--~~~~~~~~~L~~l~l~~n~-~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (580)
|+++++|++|+|++|++++. ++.+..+.+|+.|++++|. +..+++..+
T Consensus 94 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~----------------------------- 144 (549)
T 2z81_A 94 FGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDF----------------------------- 144 (549)
T ss_dssp HTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTT-----------------------------
T ss_pred hccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhh-----------------------------
Confidence 99999999999999999964 4568999999999999997 554543322
Q ss_pred CCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccC-cCCCCCCEEEccCCccccc
Q 008026 162 SDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGL-SVLGALKELDVSNNQLYGK 235 (580)
Q Consensus 162 ~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l-~~l~~L~~l~ls~N~l~g~ 235 (580)
..+++|+.|++++|++.+.+|..++.+++|+.|++++|.+. .+|..+ ..+++|++|++++|++++.
T Consensus 145 -------~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 145 -------AGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp -------TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred -------hcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 23347888888888888888888888888888888888876 555544 4578888888888888864
No 331
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.80 E-value=1.1e-19 Score=190.86 Aligned_cols=217 Identities=20% Similarity=0.137 Sum_probs=113.2
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccC-------------ceEecccCcCcCCCCCC-------
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSL-------------KEIWLHSNAFSGPLPDF------- 61 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~~p~~------- 61 (580)
|++ |.+|++| .+++.|+.+++++|.+.+..|..++++++| ++|++++|.+++.++..
T Consensus 21 n~l-~~iP~~i--~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~~~L~~L~ 97 (454)
T 1jl5_A 21 SNL-TEMPVEA--ENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLV 97 (454)
T ss_dssp ----------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCCTTCSEEE
T ss_pred Cch-hhCChhH--hcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCcCCCCEEE
Confidence 444 6666666 456666666666666665666666655543 55555555555432210
Q ss_pred ----------CCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCC
Q 008026 62 ----------SGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGAC 131 (580)
Q Consensus 62 ----------~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~ 131 (580)
..+++|+.|++++|+++ .+|.. .++|++|+|++|+++++ |++..+.+|+.|++++|.+..+|...
T Consensus 98 l~~n~l~~lp~~~~~L~~L~l~~n~l~-~l~~~---~~~L~~L~L~~n~l~~l-p~~~~l~~L~~L~l~~N~l~~lp~~~ 172 (454)
T 1jl5_A 98 ASCNSLTELPELPQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLEKL-PELQNSSFLKIIDVDNNSLKKLPDLP 172 (454)
T ss_dssp CCSSCCSSCCCCCTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSCCCCCC
T ss_pred ccCCcCCccccccCCCcEEECCCCccC-cccCC---CCCCCEEECcCCCCCCC-cccCCCCCCCEEECCCCcCcccCCCc
Confidence 01234444444444444 23321 14677777777777763 35777777777777777776655332
Q ss_pred chhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCccccc
Q 008026 132 DPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGM 211 (580)
Q Consensus 132 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 211 (580)
. .+....++++....++ .+..+++|+.|++++|++++ +|... ++|++|++++|++. .
T Consensus 173 ~-----------------~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~ 229 (454)
T 1jl5_A 173 P-----------------SLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-E 229 (454)
T ss_dssp T-----------------TCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-S
T ss_pred c-----------------cccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-c
Confidence 1 2233333444444444 35556667777777777663 44332 46667777777766 6
Q ss_pred CCccCcCCCCCCEEEccCCcccccCCCCC-CCceeecCCCC
Q 008026 212 IPEGLSVLGALKELDVSNNQLYGKIPSFK-SNAIVNTDGNP 251 (580)
Q Consensus 212 ~p~~l~~l~~L~~l~ls~N~l~g~~p~~~-~~~~~~~~~n~ 251 (580)
+|+ +..+++|++|++++|++++ +|... ....+++++|.
T Consensus 230 lp~-~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 230 LPE-LQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNY 268 (454)
T ss_dssp CCC-CTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSC
T ss_pred ccc-cCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCc
Confidence 663 6677777777777777765 34332 22345555554
No 332
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=6.5e-20 Score=181.00 Aligned_cols=171 Identities=19% Similarity=0.232 Sum_probs=120.8
Q ss_pred ccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
.+..|+.+++++|.+... + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|+++ .+| .+..+++|+.|+
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~-~~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCC-CCh-hhccCCCCCEEE
Confidence 455566666666654432 2 36777777777777777776555 677777777777777777 344 377777777777
Q ss_pred ccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEE
Q 008026 96 MTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNIT 175 (580)
Q Consensus 96 L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 175 (580)
|++|++++. +.+..+.+|+.|++++|.+..++ .+..+++|+
T Consensus 119 L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~~--------------------------------------~l~~l~~L~ 159 (291)
T 1h6t_A 119 LEHNGISDI-NGLVHLPQLESLYLGNNKITDIT--------------------------------------VLSRLTKLD 159 (291)
T ss_dssp CTTSCCCCC-GGGGGCTTCCEEECCSSCCCCCG--------------------------------------GGGGCTTCS
T ss_pred CCCCcCCCC-hhhcCCCCCCEEEccCCcCCcch--------------------------------------hhccCCCCC
Confidence 777777765 55667777777777777665441 123345788
Q ss_pred EEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccc
Q 008026 176 VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 176 ~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
.|++++|++.+..| +..+++|+.|+|++|+++ .+|. +..+++|+.|++++|+++.
T Consensus 160 ~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~-~l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 160 TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-BCGG-GTTCTTCSEEEEEEEEEEC
T ss_pred EEEccCCccccchh--hcCCCccCEEECCCCcCC-CChh-hccCCCCCEEECcCCcccC
Confidence 88888888885443 888888888888888887 4554 7888888888888888875
No 333
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=6.7e-20 Score=171.63 Aligned_cols=178 Identities=18% Similarity=0.160 Sum_probs=145.0
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCcccccCCcc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDS 84 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~P~~ 84 (580)
..+|..+. ..|+.+++++|++.+..+..|.++++|++|+|++|+|++.++. |..+++|++|+|++|++++..+..
T Consensus 20 ~~~p~~~~----~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 95 (208)
T 2o6s_A 20 TSVPTGIP----AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGV 95 (208)
T ss_dssp SSCCSCCC----TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cCCCCCCC----CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhH
Confidence 35676662 4566677777877766667789999999999999999987775 788999999999999999444445
Q ss_pred ccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCC
Q 008026 85 LVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD 163 (580)
Q Consensus 85 ~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (580)
|.++++|+.|+|++|++++.++. +..+.+|+.|++++|.+..+++..+.
T Consensus 96 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~------------------------------ 145 (208)
T 2o6s_A 96 FDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD------------------------------ 145 (208)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT------------------------------
T ss_pred hcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhc------------------------------
Confidence 89999999999999999999886 68899999999999999887765432
Q ss_pred ccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccc
Q 008026 164 WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 164 ~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
.+++|+.|++++|.+.+ .+++|+.|+++.|+++|.+|++++.++. ++..+...|
T Consensus 146 ------~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~----~~~~C~~~~ 199 (208)
T 2o6s_A 146 ------RLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP----DSAKCSGSG 199 (208)
T ss_dssp ------TCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT----TCSBBTTTC
T ss_pred ------cCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC----CccccccCC
Confidence 23489999999998774 4568999999999999999999988775 344444433
No 334
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.80 E-value=5.7e-19 Score=185.47 Aligned_cols=201 Identities=15% Similarity=0.056 Sum_probs=160.1
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccC
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPV 81 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 81 (580)
|++++ +| .| ..+..|+.+++++|++.+ .| ++++++|++|+|++|+|++. | +..+++|++|+|++|++++ +
T Consensus 52 n~l~~-~~-~l--~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~-l 121 (457)
T 3bz5_A 52 SSITD-MT-GI--EKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTK-L 121 (457)
T ss_dssp SCCCC-CT-TG--GGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSC-C
T ss_pred CCccc-Ch-hh--cccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCe-e
Confidence 55665 46 56 567888888888887665 34 89999999999999999986 3 8899999999999999994 6
Q ss_pred CccccCCCCCcEEEccCCcccccCCCCCcccccccccccCC-CCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCC
Q 008026 82 PDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNN-FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDP 160 (580)
Q Consensus 82 P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (580)
| ++.+++|+.|++++|+++++ .+..+.+|+.|++++| .+..++ + ..+..+....+.++.
T Consensus 122 ~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~~---~-------------~~l~~L~~L~ls~n~ 181 (457)
T 3bz5_A 122 D--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKLD---V-------------TPQTQLTTLDCSFNK 181 (457)
T ss_dssp C--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCCC---C-------------TTCTTCCEEECCSSC
T ss_pred c--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCcccccc---c-------------ccCCcCCEEECCCCc
Confidence 6 99999999999999999996 3888999999999999 444442 1 122334444455555
Q ss_pred CCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCC
Q 008026 161 CSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFK 240 (580)
Q Consensus 161 ~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~ 240 (580)
...++ +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+
T Consensus 182 l~~l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l 253 (457)
T 3bz5_A 182 ITELD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTL 253 (457)
T ss_dssp CCCCC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTC
T ss_pred cceec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHC
Confidence 55554 55667899999999999964 48899999999999999985 77 8889999999999999998765544
No 335
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.2e-19 Score=168.39 Aligned_cols=133 Identities=21% Similarity=0.270 Sum_probs=87.7
Q ss_pred ccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCccccccccccc
Q 008026 42 TSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGS 120 (580)
Q Consensus 42 ~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~ 120 (580)
++|++|+|++|+|++.++ .|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|+.+++.
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~------------- 98 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS------------- 98 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTT-------------
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHh-------------
Confidence 355555555555555544 355555555555555555544455555555555555555555544432
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcE
Q 008026 121 NNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQR 200 (580)
Q Consensus 121 ~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~ 200 (580)
.+. .+++|+.|+|++|++++..|..|..+++|+.
T Consensus 99 ----------~f~------------------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 132 (220)
T 2v9t_B 99 ----------LFE------------------------------------GLFSLQLLLLNANKINCLRVDAFQDLHNLNL 132 (220)
T ss_dssp ----------TTT------------------------------------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ----------Hcc------------------------------------CCCCCCEEECCCCCCCEeCHHHcCCCCCCCE
Confidence 211 1237888888888888777788888888888
Q ss_pred EeccCCcccccCCccCcCCCCCCEEEccCCccc
Q 008026 201 LILADNNLSGMIPEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 201 L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~ 233 (580)
|+|++|+|++..+..+..+++|+.|+|++|++.
T Consensus 133 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 133 LSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred EECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 888888888666667888888888888777665
No 336
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.80 E-value=3.2e-19 Score=188.43 Aligned_cols=214 Identities=18% Similarity=0.184 Sum_probs=147.5
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
.+++.|+.+++++|.+.. . +.+.++++|++|++++|.+++..| +..+++|+.|+|++|++. .++ .+..+++|+.|
T Consensus 174 ~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~-~~~-~l~~l~~L~~L 248 (466)
T 1o6v_A 174 ANLTTLERLDISSNKVSD-I-SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLK-DIG-TLASLTNLTDL 248 (466)
T ss_dssp TTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCC-CCG-GGGGCTTCSEE
T ss_pred ccCCCCCEEECcCCcCCC-C-hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcc-cch-hhhcCCCCCEE
Confidence 345666666776665443 2 347777788888888887776655 566777888888888777 443 57778888888
Q ss_pred EccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcE
Q 008026 95 NMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNI 174 (580)
Q Consensus 95 ~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 174 (580)
++++|++++.++ +..+.+|+.|++++|.+..+++ + ..+..+....+.++....++. +..+++|
T Consensus 249 ~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~-------------~~l~~L~~L~L~~n~l~~~~~-~~~l~~L 311 (466)
T 1o6v_A 249 DLANNQISNLAP-LSGLTKLTELKLGANQISNISP--L-------------AGLTALTNLELNENQLEDISP-ISNLKNL 311 (466)
T ss_dssp ECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--G-------------TTCTTCSEEECCSSCCSCCGG-GGGCTTC
T ss_pred ECCCCccccchh-hhcCCCCCEEECCCCccCcccc--c-------------cCCCccCeEEcCCCcccCchh-hcCCCCC
Confidence 888888877766 7777778888888887776553 1 123334444455555555444 5566788
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCC--CCCceeecCCCCC
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSF--KSNAIVNTDGNPD 252 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~n~~ 252 (580)
+.|++++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++.+|-. .....+.+.+|++
T Consensus 312 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 312 TYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAW 387 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEE
T ss_pred CEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcc
Confidence 888888888886554 77888888888888888743 46788888888888888888777611 1223467777766
Q ss_pred CC
Q 008026 253 IG 254 (580)
Q Consensus 253 ~c 254 (580)
.+
T Consensus 388 ~~ 389 (466)
T 1o6v_A 388 TN 389 (466)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 337
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=6.9e-20 Score=186.76 Aligned_cols=155 Identities=21% Similarity=0.168 Sum_probs=103.7
Q ss_pred cCceEecccCcCcCCCCC-CC-CCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCccccccccccc
Q 008026 43 SLKEIWLHSNAFSGPLPD-FS-GVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGS 120 (580)
Q Consensus 43 ~L~~L~L~~N~l~~~~p~-~~-~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~ 120 (580)
.|+.|+|++|+|++..+. |. ++++|+.|+|++|+|++..|..|.++++|++|+|++|+|+++++.
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~------------- 106 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEF------------- 106 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-------------
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHH-------------
Confidence 455666666666655553 44 566666666666666633334466666666666666666555442
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcE
Q 008026 121 NNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQR 200 (580)
Q Consensus 121 ~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~ 200 (580)
.+ ..+.+|+.|+|++|+|.+..|..|..+++|+.
T Consensus 107 ----------~~------------------------------------~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 140 (361)
T 2xot_A 107 ----------LF------------------------------------SDLQALEVLLLYNNHIVVVDRNAFEDMAQLQK 140 (361)
T ss_dssp ----------TT------------------------------------TTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred ----------Hh------------------------------------CCCcCCCEEECCCCcccEECHHHhCCcccCCE
Confidence 11 12237888888999998777888999999999
Q ss_pred EeccCCcccccCCccC----cCCCCCCEEEccCCcccccCCCCCC------CceeecCCCCCCCCCC
Q 008026 201 LILADNNLSGMIPEGL----SVLGALKELDVSNNQLYGKIPSFKS------NAIVNTDGNPDIGKEK 257 (580)
Q Consensus 201 L~ls~N~l~g~~p~~l----~~l~~L~~l~ls~N~l~g~~p~~~~------~~~~~~~~n~~~c~~~ 257 (580)
|+|++|+|+ .+|..+ ..+++|+.|||++|+|++..+..+. ...+.+.+|||.|+|.
T Consensus 141 L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 141 LYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp EECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred EECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 999999998 566654 5688999999999999854433221 1347889999999875
No 338
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=6.5e-19 Score=167.45 Aligned_cols=154 Identities=18% Similarity=0.130 Sum_probs=93.8
Q ss_pred ceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCC
Q 008026 45 KEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNF 123 (580)
Q Consensus 45 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~ 123 (580)
+.++.++++++..++.+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+.+++. |..+.+|+.|++++|.
T Consensus 22 ~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 345555555443333221 4455555555555543344455555555555555555444443 3344444444444444
Q ss_pred CCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEec
Q 008026 124 CLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLIL 203 (580)
Q Consensus 124 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l 203 (580)
+..+++..+. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 100 l~~l~~~~~~------------------------------------~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 100 LTVLPSAVFD------------------------------------RLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp CCCCCTTTTT------------------------------------TCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred CCccChhHhC------------------------------------cchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 4444332221 2237888889999888 78888889999999999
Q ss_pred cCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 204 ADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 204 s~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
++|+|++..+..+..+++|+.|+|++|++.+..+
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999985555678889999999998888876544
No 339
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=5e-19 Score=191.39 Aligned_cols=175 Identities=19% Similarity=0.232 Sum_probs=133.2
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
..|..|+.++++.|.+.. ++ .|..|++|++|+|++|.|++.+| +..+++|+.|+|++|+|. .+| .+..+++|+.|
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSL 114 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCC-CCT-TSTTCTTCCEE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCC-CCh-hhccCCCCCEE
Confidence 346667777777765443 33 47777788888888887776655 677777888888888777 444 67777788888
Q ss_pred EccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcE
Q 008026 95 NMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNI 174 (580)
Q Consensus 95 ~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 174 (580)
+|++|+++++ +.+..+.+|+.|++++|.+..+ ..++.+++|
T Consensus 115 ~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--------------------------------------~~l~~l~~L 155 (605)
T 1m9s_A 115 SLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--------------------------------------TVLSRLTKL 155 (605)
T ss_dssp ECTTSCCCCC-GGGGGCTTCSEEECCSSCCCCC--------------------------------------GGGGSCTTC
T ss_pred EecCCCCCCC-ccccCCCccCEEECCCCccCCc--------------------------------------hhhcccCCC
Confidence 8888877764 5577777777777777776544 123445699
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
+.|+|++|+|.+..| +..|++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++...
T Consensus 156 ~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 156 DTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEEEECCCC
T ss_pred CEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCcCcCCcc
Confidence 999999999997655 9999999999999999984 55 69999999999999999997543
No 340
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.78 E-value=8.1e-19 Score=185.36 Aligned_cols=195 Identities=15% Similarity=0.160 Sum_probs=160.4
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
..+..|+.+++++|.+.+..| +..+++|++|+|++|.+++. +.+..+++|+.|+|++|++.+ ++. +..+++|+.|
T Consensus 196 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L 270 (466)
T 1o6v_A 196 AKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISN-LAP-LSGLTKLTEL 270 (466)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC-CGG-GTTCTTCSEE
T ss_pred ccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCcccc-chh-hhcCCCCCEE
Confidence 456777788888887665444 78899999999999999864 567889999999999999994 444 8899999999
Q ss_pred EccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcE
Q 008026 95 NMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNI 174 (580)
Q Consensus 95 ~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 174 (580)
+|++|++++.++ +..+.+|+.|++++|.+..+++ ...+..+....+.++...+.+. +..+++|
T Consensus 271 ~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~---------------~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L 333 (466)
T 1o6v_A 271 KLGANQISNISP-LAGLTALTNLELNENQLEDISP---------------ISNLKNLTYLTLYFNNISDISP-VSSLTKL 333 (466)
T ss_dssp ECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG---------------GGGCTTCSEEECCSSCCSCCGG-GGGCTTC
T ss_pred ECCCCccCcccc-ccCCCccCeEEcCCCcccCchh---------------hcCCCCCCEEECcCCcCCCchh-hccCccC
Confidence 999999998877 8888999999999999887653 1223445555566666666554 5677899
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccccc
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 235 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ 235 (580)
+.|++++|++++. +.+.++++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 334 ~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 334 QRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 9999999999964 479999999999999999997776 89999999999999999974
No 341
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=3.3e-19 Score=173.18 Aligned_cols=173 Identities=13% Similarity=0.148 Sum_probs=145.5
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEE
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 94 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L 94 (580)
.++..+..++++.+.+.. .+ .+..+++|++|++++|.|+.. |.+..+++|+.|+|++|+|+ .+|. +..+++|+.|
T Consensus 16 ~~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 16 PGLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQSL-AGMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEE
T ss_pred HHHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcccc-hHHhhCCCCCEEECCCCccC-CChh-hccCCCCCEE
Confidence 356777788888876544 34 688999999999999999954 57888999999999999999 5666 9999999999
Q ss_pred EccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcE
Q 008026 95 NMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNI 174 (580)
Q Consensus 95 ~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 174 (580)
+|++|++++.++ +.. .+|+.|++++|.+..++. +..+++|
T Consensus 91 ~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~~~~--------------------------------------l~~l~~L 130 (263)
T 1xeu_A 91 SVNRNRLKNLNG-IPS-ACLSRLFLDNNELRDTDS--------------------------------------LIHLKNL 130 (263)
T ss_dssp ECCSSCCSCCTT-CCC-SSCCEEECCSSCCSBSGG--------------------------------------GTTCTTC
T ss_pred ECCCCccCCcCc-ccc-CcccEEEccCCccCCChh--------------------------------------hcCcccc
Confidence 999999998665 333 889999999998876531 2234589
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccC
Q 008026 175 TVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKI 236 (580)
Q Consensus 175 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~ 236 (580)
+.|++++|++++ +| .++.+++|+.|+|++|++++. ..+..+++|+.|++++|++++..
T Consensus 131 ~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 131 EILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred cEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 999999999995 55 799999999999999999954 67999999999999999999663
No 342
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=8.7e-19 Score=165.41 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=133.5
Q ss_pred CcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCC--CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHh
Q 008026 67 LESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE--FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKL 144 (580)
Q Consensus 67 L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~ 144 (580)
-+.+++++|.++ .+|..+. ..++.|+|++|+|++.++. |..+.+|+.|++++|.+..+++..+.
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~----------- 78 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFE----------- 78 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTT-----------
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhC-----------
Confidence 358999999999 7998774 4678999999999999764 78999999999999999887765442
Q ss_pred hCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCE
Q 008026 145 MGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKE 224 (580)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~ 224 (580)
.+.+|+.|+|++|++++..|..|..+++|++|+|++|+|++..|..+..+++|++
T Consensus 79 -------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 133 (220)
T 2v70_A 79 -------------------------GASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRL 133 (220)
T ss_dssp -------------------------TCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSE
T ss_pred -------------------------CCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCE
Confidence 3348999999999999878888999999999999999999888999999999999
Q ss_pred EEccCCcccccCCCCCC----CceeecCCCCCCCCCCC
Q 008026 225 LDVSNNQLYGKIPSFKS----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 225 l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~c~~~~ 258 (580)
|+|++|++++..|..+. ...+++.+|+|.|.|..
T Consensus 134 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 134 LSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp EECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred EECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 99999999998887664 34689999999998764
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.77 E-value=1.1e-18 Score=173.63 Aligned_cols=189 Identities=16% Similarity=0.197 Sum_probs=150.7
Q ss_pred cceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEc
Q 008026 17 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNM 96 (580)
Q Consensus 17 l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L 96 (580)
+..+....+..+..... ..+..+++|++|++++|.++. +|.+..+++|+.|+|++|++. .+|. +..+++|+.|+|
T Consensus 18 l~~~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-l~~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L 92 (308)
T 1h6u_A 18 LANAIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVTT-IEGVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELEL 92 (308)
T ss_dssp HHHHHHHHTTCSSTTSE--ECHHHHHTCCEEECTTSCCCC-CTTGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEEC
T ss_pred HHHHHHHHhCCCCcCce--ecHHHcCCcCEEEeeCCCccC-chhhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEc
Confidence 33343444544443332 235678999999999999986 467888999999999999999 6776 999999999999
Q ss_pred cCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEE
Q 008026 97 TNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITV 176 (580)
Q Consensus 97 ~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 176 (580)
++|++++. +.+..+.+|+.|++++|.+..+++ +..+++|+.
T Consensus 93 ~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~~~~--------------------------------------l~~l~~L~~ 133 (308)
T 1h6u_A 93 SGNPLKNV-SAIAGLQSIKTLDLTSTQITDVTP--------------------------------------LAGLSNLQV 133 (308)
T ss_dssp CSCCCSCC-GGGTTCTTCCEEECTTSCCCCCGG--------------------------------------GTTCTTCCE
T ss_pred cCCcCCCc-hhhcCCCCCCEEECCCCCCCCchh--------------------------------------hcCCCCCCE
Confidence 99999986 578999999999999998876542 123458999
Q ss_pred EEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC--CCCCCceeecCCCCCC
Q 008026 177 INFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP--SFKSNAIVNTDGNPDI 253 (580)
Q Consensus 177 L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p--~~~~~~~~~~~~n~~~ 253 (580)
|++++|++++ +|. ++.+++|+.|+|++|+++ .+|. +..+++|+.|++++|++++..| .......+++++|...
T Consensus 134 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 134 LYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVS-DLTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp EECCSSCCCC-CGG-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred EECCCCccCc-Ccc-ccCCCCccEEEccCCcCC-CChh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccC
Confidence 9999999995 444 999999999999999999 5555 9999999999999999996544 1123345788888654
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.77 E-value=4e-19 Score=180.34 Aligned_cols=193 Identities=14% Similarity=0.039 Sum_probs=122.9
Q ss_pred CCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC--CCCCCCCCcE-EeccCCcccccCCc
Q 008026 7 GLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLES-LSLRDNFFTGPVPD 83 (580)
Q Consensus 7 ~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~-L~L~~N~l~~~~P~ 83 (580)
+||..+. .+++ .+++++|++.+..+++|.+|++|++|+|++|++.+.+| .|.++++|+. +.+++|+|....|.
T Consensus 23 ~iP~~l~-~~l~---~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~ 98 (350)
T 4ay9_X 23 EIPSDLP-RNAI---ELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPE 98 (350)
T ss_dssp SCCTTCC-TTCS---EEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTT
T ss_pred ccCcCcC-CCCC---EEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCch
Confidence 5666653 2333 34444555544444567777777777777777765554 2666666553 55566777744455
Q ss_pred cccCCCCCcEEEccCCcccccCCC-CCcccccccccccC-CCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCC
Q 008026 84 SLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSN-NFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPC 161 (580)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~-n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (580)
.|..+++|+.|++++|+++..++. +.....+..+++.+ +.+..++...+..+
T Consensus 99 ~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~-------------------------- 152 (350)
T 4ay9_X 99 AFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL-------------------------- 152 (350)
T ss_dssp SBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS--------------------------
T ss_pred hhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc--------------------------
Confidence 677777777777777777766653 44455555565543 45555554433111
Q ss_pred CCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccC-CcccccCCc-cCcCCCCCCEEEccCCcccccCCCC
Q 008026 162 SDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILAD-NNLSGMIPE-GLSVLGALKELDVSNNQLYGKIPSF 239 (580)
Q Consensus 162 ~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~-N~l~g~~p~-~l~~l~~L~~l~ls~N~l~g~~p~~ 239 (580)
...++.|+|++|+|+ .+|.......+|++|++++ |++. .+|. .|..+++|++|||++|+|+...+..
T Consensus 153 ---------~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~ 221 (350)
T 4ay9_X 153 ---------SFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYG 221 (350)
T ss_dssp ---------BSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSS
T ss_pred ---------chhhhhhcccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChhh
Confidence 126888899999988 6777777778888898875 5665 6765 5688889999999999888544433
Q ss_pred C
Q 008026 240 K 240 (580)
Q Consensus 240 ~ 240 (580)
+
T Consensus 222 ~ 222 (350)
T 4ay9_X 222 L 222 (350)
T ss_dssp C
T ss_pred h
Confidence 3
No 345
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.77 E-value=9.5e-18 Score=175.98 Aligned_cols=177 Identities=20% Similarity=0.236 Sum_probs=92.8
Q ss_pred ccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccccC
Q 008026 42 TSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSN 121 (580)
Q Consensus 42 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~ 121 (580)
++|++|++++|++++... + .++|++|+|++|+++ .+| +|+++++|++|++++|++++++..+ .+|+.|++++
T Consensus 111 ~~L~~L~l~~n~l~~l~~-~--~~~L~~L~L~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~ 182 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKALSD-L--PPLLEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGN 182 (454)
T ss_dssp TTCCEEECCSSCCSCCCS-C--CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCS
T ss_pred CCCcEEECCCCccCcccC-C--CCCCCEEECcCCCCC-CCc-ccCCCCCCCEEECCCCcCcccCCCc---ccccEEECcC
Confidence 556666666666554321 1 145666666666665 355 3566666666666666665533222 2555555666
Q ss_pred CCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEE
Q 008026 122 NFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRL 201 (580)
Q Consensus 122 n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L 201 (580)
|.+..+|. +.. +..+......++....++... .+|+.|++++|++. .+| +++.+++|++|
T Consensus 183 n~l~~l~~--~~~-------------l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L 242 (454)
T 1jl5_A 183 NQLEELPE--LQN-------------LPFLTAIYADNNSLKKLPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTI 242 (454)
T ss_dssp SCCSSCCC--CTT-------------CTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEE
T ss_pred CcCCcCcc--ccC-------------CCCCCEEECCCCcCCcCCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEE
Confidence 65555431 111 112222223333332222211 36677777777776 566 36677777777
Q ss_pred eccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCCC-CceeecCCCC
Q 008026 202 ILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFKS-NAIVNTDGNP 251 (580)
Q Consensus 202 ~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~~-~~~~~~~~n~ 251 (580)
++++|+++ .+|.. +++|+.|++++|++++ +|.... ...+++++|.
T Consensus 243 ~l~~N~l~-~l~~~---~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~ 288 (454)
T 1jl5_A 243 YADNNLLK-TLPDL---PPSLEALNVRDNYLTD-LPELPQSLTFLDVSENI 288 (454)
T ss_dssp ECCSSCCS-SCCSC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred ECCCCcCC-ccccc---ccccCEEECCCCcccc-cCcccCcCCEEECcCCc
Confidence 77777776 45543 2566777777777665 444332 2335555554
No 346
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.77 E-value=8.8e-19 Score=192.35 Aligned_cols=173 Identities=18% Similarity=0.115 Sum_probs=118.9
Q ss_pred CCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCC-
Q 008026 30 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE- 107 (580)
Q Consensus 30 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~- 107 (580)
.++.+|..+- +++++|||++|+|++++| +|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|+++++.
T Consensus 42 ~l~~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~ 119 (635)
T 4g8a_A 42 NFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGA 119 (635)
T ss_dssp CCSSCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGG
T ss_pred CcCccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHH
Confidence 3444554331 367788888888877766 477788888888888888744445577788888888888888777765
Q ss_pred CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccc-
Q 008026 108 FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG- 186 (580)
Q Consensus 108 ~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~- 186 (580)
|.++.+|+.|++++|.+..+++..+. .+++|+.|+|++|++.+
T Consensus 120 f~~L~~L~~L~Ls~N~l~~l~~~~~~------------------------------------~L~~L~~L~Ls~N~l~~~ 163 (635)
T 4g8a_A 120 FSGLSSLQKLVAVETNLASLENFPIG------------------------------------HLKTLKELNVAHNLIQSF 163 (635)
T ss_dssp GTTCTTCCEEECTTSCCCCSTTCCCT------------------------------------TCTTCCEEECCSSCCCCC
T ss_pred hcCCCCCCEEECCCCcCCCCChhhhh------------------------------------cCcccCeeccccCccccC
Confidence 67777788888888877766654432 23377777777777764
Q ss_pred cCcccccCCCCCcEEeccCCcccccCCccCcCCCCC----CEEEccCCcccccCCCCC
Q 008026 187 TISPEFASFKSLQRLILADNNLSGMIPEGLSVLGAL----KELDVSNNQLYGKIPSFK 240 (580)
Q Consensus 187 ~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L----~~l~ls~N~l~g~~p~~~ 240 (580)
.+|..++.+++|+.|+|++|+|++..|..+..++++ ..++++.|.++...|...
T Consensus 164 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~ 221 (635)
T 4g8a_A 164 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF 221 (635)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT
T ss_pred CCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc
Confidence 356677777777777777777776666666655443 357777777776555443
No 347
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.76 E-value=1.4e-17 Score=180.36 Aligned_cols=103 Identities=17% Similarity=0.009 Sum_probs=54.1
Q ss_pred CCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCcccc
Q 008026 7 GLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLV 86 (580)
Q Consensus 7 ~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~ 86 (580)
.+|..+. ..|+.+++++|.+. .+|. .+++|++|+|++|+|++.++ .+++|++|+|++|+|+ .+|.
T Consensus 54 ~lp~~l~----~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~-~l~~--- 118 (622)
T 3g06_A 54 TLPDCLP----AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLT-HLPA--- 118 (622)
T ss_dssp CCCSCCC----TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCC-CCCC---
T ss_pred ccChhhC----CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCC-CCCC---
Confidence 6676663 33344444445433 3443 45677777777777764433 4566666666666666 4554
Q ss_pred CCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCC
Q 008026 87 KLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPS 127 (580)
Q Consensus 87 ~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~ 127 (580)
.+++|+.|+|++|+++++++. +.+|+.|++++|.+..+
T Consensus 119 ~l~~L~~L~L~~N~l~~lp~~---l~~L~~L~Ls~N~l~~l 156 (622)
T 3g06_A 119 LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQLASL 156 (622)
T ss_dssp CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSCC
T ss_pred CCCCcCEEECCCCCCCcCCCC---CCCCCEEECcCCcCCCc
Confidence 344555555555555544332 13444444444444443
No 348
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=6.7e-19 Score=179.45 Aligned_cols=163 Identities=19% Similarity=0.178 Sum_probs=121.1
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhc-CcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQ-NMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPD 83 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~ 83 (580)
..+|..+. ..|+.+++++|++....+..|. ++++|++|+|++|+|++..| .|.++++|+.|+|++|+|++..|.
T Consensus 31 ~~iP~~~~----~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 106 (361)
T 2xot_A 31 PNVPQSLP----SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEF 106 (361)
T ss_dssp SSCCSSCC----TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CccCccCC----CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHH
Confidence 45888773 2356677888877776667787 99999999999999999887 599999999999999999955556
Q ss_pred cccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCC
Q 008026 84 SLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS 162 (580)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (580)
.|.++++|+.|+|++|+|+++.|. |..+.
T Consensus 107 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-------------------------------------------------- 136 (361)
T 2xot_A 107 LFSDLQALEVLLLYNNHIVVVDRNAFEDMA-------------------------------------------------- 136 (361)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCT--------------------------------------------------
T ss_pred HhCCCcCCCEEECCCCcccEECHHHhCCcc--------------------------------------------------
Confidence 799999999999999999988764 44444
Q ss_pred CccceeccCCcEEEEEecCCcccccCcccc----cCCCCCcEEeccCCcccccCCccCcCCCC--CCEEEccCCccc
Q 008026 163 DWIGVTCTKGNITVINFQKMNLTGTISPEF----ASFKSLQRLILADNNLSGMIPEGLSVLGA--LKELDVSNNQLY 233 (580)
Q Consensus 163 ~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~----~~l~~L~~L~ls~N~l~g~~p~~l~~l~~--L~~l~ls~N~l~ 233 (580)
+|+.|+|++|+|++ +|..+ ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|++.
T Consensus 137 ----------~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 137 ----------QLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ----------TCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ----------cCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 55666666666663 44333 45677777777777777333345566665 366777777775
No 349
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=4.1e-18 Score=161.89 Aligned_cols=151 Identities=21% Similarity=0.216 Sum_probs=131.7
Q ss_pred CcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhh
Q 008026 67 LESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLM 145 (580)
Q Consensus 67 L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~ 145 (580)
.+.++.+++++. .+|..+. ++|+.|+|++|++++.+|. |..+.+|+.|++++|.+..+++..+.
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~------------ 85 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD------------ 85 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc------------
Confidence 568999999999 8998774 8999999999999999775 78999999999999999888765542
Q ss_pred CCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEE
Q 008026 146 GYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKEL 225 (580)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l 225 (580)
.+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|
T Consensus 86 ------------------------~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 140 (229)
T 3e6j_A 86 ------------------------SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL 140 (229)
T ss_dssp ------------------------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE
T ss_pred ------------------------cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE
Confidence 2348999999999999766667899999999999999999 999999999999999
Q ss_pred EccCCcccccCCCCCC----CceeecCCCCCCCCCC
Q 008026 226 DVSNNQLYGKIPSFKS----NAIVNTDGNPDIGKEK 257 (580)
Q Consensus 226 ~ls~N~l~g~~p~~~~----~~~~~~~~n~~~c~~~ 257 (580)
+|++|++++..+..+. ...+.+.+|+|.|.|.
T Consensus 141 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 141 ALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999999977665443 3468999999999874
No 350
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.75 E-value=1.1e-17 Score=181.05 Aligned_cols=111 Identities=21% Similarity=0.086 Sum_probs=67.6
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccC
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPV 81 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 81 (580)
|+++ .+|..+ ..|+.+++++|++. .+|. .+++|++|+|++|.|++.++ .+++|+.|+|++|+|+ .+
T Consensus 71 N~l~-~lp~~l-----~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~L~~N~l~-~l 136 (622)
T 3g06_A 71 NNLT-SLPALP-----PELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA---LPSGLCKLWIFGNQLT-SL 136 (622)
T ss_dssp CCCS-CCCCCC-----TTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC---CCTTCCEEECCSSCCS-CC
T ss_pred CCCC-CCCCcC-----CCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC---CCCCcCEEECCCCCCC-cC
Confidence 3443 566633 44455555556543 4554 66788888888888876544 4566777777777776 46
Q ss_pred CccccCCCCCcEEEccCCcccccCCCCCc-----------------ccccccccccCCCCCCCCC
Q 008026 82 PDSLVKLESLKIVNMTNNLLQGPVPEFDR-----------------SVSLDMAKGSNNFCLPSPG 129 (580)
Q Consensus 82 P~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----------------~~~L~~l~l~~n~~~~~~~ 129 (580)
|.. +++|+.|+|++|+++++++.+.. +.+|+.|++++|.+..+|.
T Consensus 137 p~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l~~ 198 (622)
T 3g06_A 137 PVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPT 198 (622)
T ss_dssp CCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC
T ss_pred CCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCCCC
Confidence 653 36666666666666654432211 2566777777777776664
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=4.6e-18 Score=160.45 Aligned_cols=139 Identities=22% Similarity=0.291 Sum_probs=116.1
Q ss_pred cCCCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCcc
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 84 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~ 84 (580)
..+|..+. ..|+.+++++|++....+..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+ .+|..
T Consensus 24 ~~iP~~l~----~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~ 98 (220)
T 2v9t_B 24 TEIPTNLP----ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKS 98 (220)
T ss_dssp SSCCSSCC----TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTT
T ss_pred CcCCCccC----cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHh
Confidence 45787773 456666777787777666789999999999999999999877 5999999999999999999 67665
Q ss_pred -ccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCC
Q 008026 85 -LVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS 162 (580)
Q Consensus 85 -~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (580)
|..+++|+.|+|++|++++++|. |..+
T Consensus 99 ~f~~l~~L~~L~L~~N~l~~~~~~~~~~l--------------------------------------------------- 127 (220)
T 2v9t_B 99 LFEGLFSLQLLLLNANKINCLRVDAFQDL--------------------------------------------------- 127 (220)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTC---------------------------------------------------
T ss_pred HccCCCCCCEEECCCCCCCEeCHHHcCCC---------------------------------------------------
Confidence 78999999999999999988774 2222
Q ss_pred CccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCccc
Q 008026 163 DWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLS 209 (580)
Q Consensus 163 ~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~ 209 (580)
++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 128 ---------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 128 ---------HNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp ---------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ---------CCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 37888888888888766667888999999999999886
No 352
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=1.9e-18 Score=160.23 Aligned_cols=155 Identities=15% Similarity=0.155 Sum_probs=122.4
Q ss_pred hcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCccccc-CCCCCccccccc
Q 008026 38 IQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP-VPEFDRSVSLDM 116 (580)
Q Consensus 38 ~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~~~L~~ 116 (580)
...+++|++|++++|.|+. +|.+..+++|++|++++|.+. .+ ..+..+++|+.|+|++|++++. ++.+..+.+|+.
T Consensus 40 ~~~l~~L~~L~l~~n~i~~-l~~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVTD-LTGIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHHTCCEEEEESSCCSC-CTTGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhhcCCccEEeccCCCccC-hHHHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 4778899999999999984 447888899999999999776 44 4788999999999999999874 456888889999
Q ss_pred ccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCC
Q 008026 117 AKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFK 196 (580)
Q Consensus 117 l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~ 196 (580)
|++++|.+....+ ..+..+++|+.|++++|++.+.+| .+..++
T Consensus 117 L~Ls~n~i~~~~~------------------------------------~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~ 159 (197)
T 4ezg_A 117 LDISHSAHDDSIL------------------------------------TKINTLPKVNSIDLSYNGAITDIM-PLKTLP 159 (197)
T ss_dssp EECCSSBCBGGGH------------------------------------HHHTTCSSCCEEECCSCTBCCCCG-GGGGCS
T ss_pred EEecCCccCcHhH------------------------------------HHHhhCCCCCEEEccCCCCccccH-hhcCCC
Confidence 9999987754211 112234589999999998333676 699999
Q ss_pred CCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccc
Q 008026 197 SLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 197 ~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
+|+.|++++|+++ .++ .+..+++|++|++++|++.+
T Consensus 160 ~L~~L~l~~n~i~-~~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 160 ELKSLNIQFDGVH-DYR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SCCEEECTTBCCC-CCT-TGGGCSSCCEEEECBC----
T ss_pred CCCEEECCCCCCc-ChH-HhccCCCCCEEEeeCcccCC
Confidence 9999999999998 566 78999999999999999864
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.75 E-value=7.4e-18 Score=180.26 Aligned_cols=180 Identities=18% Similarity=0.177 Sum_probs=141.2
Q ss_pred hhcCcc-----cCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcc
Q 008026 37 VIQNMT-----SLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRS 111 (580)
Q Consensus 37 ~~~~l~-----~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 111 (580)
.+..++ +|++|+|++|.|++.++.+ +++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|+++++ +..
T Consensus 49 ~~~~l~~C~~~~L~~L~Ls~n~L~~lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~- 120 (571)
T 3cvr_A 49 AVSLLKECLINQFSELQLNRLNLSSLPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTLPE-LPA- 120 (571)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCCSCCCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC-CCT-
T ss_pred hhhhccccccCCccEEEeCCCCCCccCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCcch-hhc-
Confidence 566665 9999999999999855555 389999999999999 899 558999999999999999665 655
Q ss_pred cccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCccc
Q 008026 112 VSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPE 191 (580)
Q Consensus 112 ~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~ 191 (580)
+|+.|++++|.+..+|. .. ..+....++++.+..++. .+++|+.|+|++|+|++ +|.
T Consensus 121 -~L~~L~Ls~N~l~~lp~-~l----------------~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~- 177 (571)
T 3cvr_A 121 -SLKHLDVDNNQLTMLPE-LP----------------ALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE- 177 (571)
T ss_dssp -TCCEEECCSSCCSCCCC-CC----------------TTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-
T ss_pred -CCCEEECCCCcCCCCCC-cC----------------ccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC-cch-
Confidence 99999999999998876 21 234444555666655554 45689999999999995 887
Q ss_pred ccCCCCCcEEeccCCcccccCCccCcCCCCC-------CEEEccCCcccccCCCCCC----CceeecCCCCCCC
Q 008026 192 FASFKSLQRLILADNNLSGMIPEGLSVLGAL-------KELDVSNNQLYGKIPSFKS----NAIVNTDGNPDIG 254 (580)
Q Consensus 192 ~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L-------~~l~ls~N~l~g~~p~~~~----~~~~~~~~n~~~c 254 (580)
|. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+++ .+|..+. ...+++++|+..+
T Consensus 178 l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 178 LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 66 89999999999998 8888 665 77 99999999999 4665432 3458888888764
No 354
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=2.3e-17 Score=152.12 Aligned_cols=131 Identities=20% Similarity=0.286 Sum_probs=85.2
Q ss_pred ceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCc-cccCCCCCcEEEccCCcccccCCC-CCcccccccccccCC
Q 008026 45 KEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPD-SLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNN 122 (580)
Q Consensus 45 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n 122 (580)
+++++++|+++..+..+. .+|+.|+|++|+|++..|. .|..+++|+.|+|++|+|++.+|. |..+
T Consensus 11 ~~l~~s~~~l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l----------- 77 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA----------- 77 (192)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC-----------
T ss_pred CEEEcCCCCcCcCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCc-----------
Confidence 567777777764443343 2677777777777743333 277777777777777777776553 2222
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEe
Q 008026 123 FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLI 202 (580)
Q Consensus 123 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ 202 (580)
.+|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 78 -------------------------------------------------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 78 -------------------------------------------------SHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp -------------------------------------------------TTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred -------------------------------------------------ccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 2566666666666666666666777777777
Q ss_pred ccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 203 LADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 203 ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
|++|+|++.+|..+..+++|++|+|++|++++..+
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 77777776667777777777777777777765544
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.73 E-value=9e-18 Score=165.63 Aligned_cols=188 Identities=15% Similarity=0.175 Sum_probs=149.8
Q ss_pred ccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
.+..+..+.+..+..... ..+..+++|++|++++|.++.. |.+..+++|+.|+|++|+++ .+|. +.++++|+.|+
T Consensus 22 ~l~~~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~-~~~~-l~~l~~L~~L~ 96 (291)
T 1h6t_A 22 AFAETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLT-DIKP-LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEE
T ss_pred HHHHHHHHHhcCCCcccc--cchhhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccC-CCcc-cccCCCCCEEE
Confidence 345555555655544332 3457899999999999999865 66888999999999999999 5666 99999999999
Q ss_pred ccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEE
Q 008026 96 MTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNIT 175 (580)
Q Consensus 96 L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 175 (580)
|++|++++. +.+..+.+|+.|++++|.+..++. +..+++|+
T Consensus 97 l~~n~l~~~-~~l~~l~~L~~L~L~~n~i~~~~~--------------------------------------l~~l~~L~ 137 (291)
T 1h6t_A 97 LDENKVKDL-SSLKDLKKLKSLSLEHNGISDING--------------------------------------LVHLPQLE 137 (291)
T ss_dssp CCSSCCCCG-GGGTTCTTCCEEECTTSCCCCCGG--------------------------------------GGGCTTCC
T ss_pred CCCCcCCCC-hhhccCCCCCEEECCCCcCCCChh--------------------------------------hcCCCCCC
Confidence 999999985 458999999999999998876521 22345899
Q ss_pred EEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCC---CCCceeecCCCCC
Q 008026 176 VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSF---KSNAIVNTDGNPD 252 (580)
Q Consensus 176 ~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~---~~~~~~~~~~n~~ 252 (580)
.|++++|++++ + +.++.+++|+.|+|++|++++ ++. +..+++|+.|++++|++++ +|.. .....+++.+|+.
T Consensus 138 ~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~N~l~~-~~~-l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 138 SLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQEC 212 (291)
T ss_dssp EEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEEE
T ss_pred EEEccCCcCCc-c-hhhccCCCCCEEEccCCcccc-chh-hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCcc
Confidence 99999999995 4 579999999999999999995 444 9999999999999999986 3432 1233466677654
No 356
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.73 E-value=2.4e-18 Score=172.91 Aligned_cols=142 Identities=14% Similarity=0.136 Sum_probs=101.6
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccC------------hhhH--------HHHHHHHHHHHhcCCCc
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS------------GKGL--------TEFKSEIAVLTKVRHRH 454 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~--------~~~~~E~~~l~~l~h~n 454 (580)
.-|++.+.||+|++|.||+|...+|+.||||+++..... .... ....+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348999999999999999999889999999987542111 0001 12245666677665444
Q ss_pred ccceeeEEEcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeEe
Q 008026 455 LVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL 534 (580)
Q Consensus 455 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp~NIll 534 (580)
+....-+.. ...++||||++|++|.++. .......++.|++.+|.|||. .+||||||||.|||+
T Consensus 175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~-----------~~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl 238 (397)
T 4gyi_A 175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVS-----------SVPDPASLYADLIALILRLAK---HGLIHGDFNEFNILI 238 (397)
T ss_dssp CSCCCEEEE--ETTEEEEECCSCEEGGGCC-----------CCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEE
T ss_pred CCCCeeeec--cCceEEEEecCCccHhhhc-----------ccHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEE
Confidence 432211111 2247999999998886543 112345678999999999997 899999999999999
Q ss_pred cCCC----------cEEEEeeccccccC
Q 008026 535 GDDM----------RAKVADFGLVRLAP 552 (580)
Q Consensus 535 ~~~~----------~~kl~Dfg~a~~~~ 552 (580)
++++ .+.|+||+-+....
T Consensus 239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 239 REEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred eCCCCcccccccccceEEEEeCCcccCC
Confidence 8766 38999999776543
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.72 E-value=7.9e-18 Score=181.99 Aligned_cols=188 Identities=15% Similarity=0.180 Sum_probs=152.9
Q ss_pred ccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
.+..+..+.+..+.+.... .+..|++|+.|+|++|.|... |.+..|++|+.|+|++|+|+ .+|. +..|++|+.|+
T Consensus 19 ~l~~l~~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~Ls~N~l~-~~~~-l~~l~~L~~L~ 93 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLT-DIKP-LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCCC-TTGGGCTTCCEEECTTSCCC-CCGG-GGGCTTCCEEE
T ss_pred HHHHHHHHhccCCCccccc--chhcCCCCCEEECcCCCCCCC-hHHccCCCCCEEEeeCCCCC-CChh-hccCCCCCEEE
Confidence 4556666666666544432 367899999999999999854 57888999999999999999 5655 99999999999
Q ss_pred ccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEE
Q 008026 96 MTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNIT 175 (580)
Q Consensus 96 L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 175 (580)
|++|+|+++ |.+..+.+|+.|++++|.+..++. +..+++|+
T Consensus 94 Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l~~--------------------------------------l~~l~~L~ 134 (605)
T 1m9s_A 94 LDENKIKDL-SSLKDLKKLKSLSLEHNGISDING--------------------------------------LVHLPQLE 134 (605)
T ss_dssp CCSSCCCCC-TTSTTCTTCCEEECTTSCCCCCGG--------------------------------------GGGCTTCS
T ss_pred CcCCCCCCC-hhhccCCCCCEEEecCCCCCCCcc--------------------------------------ccCCCccC
Confidence 999999985 579999999999999998876431 22345899
Q ss_pred EEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCC---CCCceeecCCCCC
Q 008026 176 VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSF---KSNAIVNTDGNPD 252 (580)
Q Consensus 176 ~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~---~~~~~~~~~~n~~ 252 (580)
.|+|++|++++. ..++.|++|+.|+|++|+|.+..| +..+++|+.|+|++|++++. |.. .....+.+.+|+.
T Consensus 135 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 135 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp EEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred EEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 999999999954 689999999999999999996555 99999999999999999974 432 2234577777754
No 358
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.72 E-value=2.2e-19 Score=184.98 Aligned_cols=235 Identities=17% Similarity=0.115 Sum_probs=164.9
Q ss_pred CCCCccccccceEEecccCCCCCCCCCch----hhcCcccCceEecccC---cCcCCCC-CC-------CCCCCCcEEec
Q 008026 8 LPASFSGSQIQSLWVNGQNGNAKLGGGID----VIQNMTSLKEIWLHSN---AFSGPLP-DF-------SGVKQLESLSL 72 (580)
Q Consensus 8 ~P~~~~~~~l~~L~~~~~~~n~~~~~~~~----~~~~l~~L~~L~L~~N---~l~~~~p-~~-------~~l~~L~~L~L 72 (580)
++..+ ..+..|+.+++++|.+....+. .|.++++|++|+|++| ++++.+| .+ ..+++|++|+|
T Consensus 24 l~~~l--~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 24 VFAVL--LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp TSHHH--HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHH--hcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 44444 4466788888888877665443 4678999999999986 4555555 23 67899999999
Q ss_pred cCCcccc----cCCccccCCCCCcEEEccCCcccccCCC-----CCcc---------cccccccccCCCCCCCCCCCchh
Q 008026 73 RDNFFTG----PVPDSLVKLESLKIVNMTNNLLQGPVPE-----FDRS---------VSLDMAKGSNNFCLPSPGACDPR 134 (580)
Q Consensus 73 ~~N~l~~----~~P~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~---------~~L~~l~l~~n~~~~~~~~~~~~ 134 (580)
++|++.+ .+|..+..+++|+.|+|++|.++...+. +..+ .+|+.|++++|.+... .
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~------~ 175 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG------S 175 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG------G
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcH------H
Confidence 9999986 4788899999999999999998755442 2333 7899999999987521 1
Q ss_pred HHHHHHHHHhhCCccccccccCCCCCCCC------ccceeccCCcEEEEEecCCccc----ccCcccccCCCCCcEEecc
Q 008026 135 LNALLSVVKLMGYPQRFAENWKGNDPCSD------WIGVTCTKGNITVINFQKMNLT----GTISPEFASFKSLQRLILA 204 (580)
Q Consensus 135 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~L~ls~n~l~----~~~p~~~~~l~~L~~L~ls 204 (580)
+..+. ..+.....+....+.++...+ .+..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|+
T Consensus 176 ~~~l~---~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 176 MKEWA---KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp HHHHH---HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred HHHHH---HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 22111 111122234444455554431 1225566778999999999996 6788889999999999999
Q ss_pred CCccccc----CCccCc--CCCCCCEEEccCCcccc----cCCCCC-----CCceeecCCCCCC
Q 008026 205 DNNLSGM----IPEGLS--VLGALKELDVSNNQLYG----KIPSFK-----SNAIVNTDGNPDI 253 (580)
Q Consensus 205 ~N~l~g~----~p~~l~--~l~~L~~l~ls~N~l~g----~~p~~~-----~~~~~~~~~n~~~ 253 (580)
+|++++. +|..+. .+++|+.|+|++|++++ .+|..+ ....+++.+|+..
T Consensus 253 ~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 253 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred CCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 9999865 566663 48999999999999997 466543 2345777777643
No 359
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.71 E-value=5e-19 Score=182.23 Aligned_cols=213 Identities=18% Similarity=0.139 Sum_probs=148.1
Q ss_pred ccceEEecccCCCCCCCCCchhh-------cCcccCceEecccCcCcC----CCC-CCCCCCCCcEEeccCCcccccCCc
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVI-------QNMTSLKEIWLHSNAFSG----PLP-DFSGVKQLESLSLRDNFFTGPVPD 83 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~-------~~l~~L~~L~L~~N~l~~----~~p-~~~~l~~L~~L~L~~N~l~~~~P~ 83 (580)
+|+.|.+.++..+++.+..|..+ .++++|++|+|++|.|++ .+| .+..+++|+.|+|++|++.+..+.
T Consensus 61 ~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~ 140 (386)
T 2ca6_A 61 DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGA 140 (386)
T ss_dssp TCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHH
T ss_pred CccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHH
Confidence 34444444443344555556444 688889999999998887 244 467788899999999988643333
Q ss_pred c----ccCC---------CCCcEEEccCCccc-ccCC----CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHH-h
Q 008026 84 S----LVKL---------ESLKIVNMTNNLLQ-GPVP----EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVK-L 144 (580)
Q Consensus 84 ~----~~~l---------~~L~~L~L~~N~l~-~~~~----~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~-~ 144 (580)
. +..+ ++|+.|+|++|+++ +..+ .+..+.+|+.|++++|.+... .+..+.. .
T Consensus 141 ~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~---------g~~~l~~~~ 211 (386)
T 2ca6_A 141 KIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE---------GIEHLLLEG 211 (386)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH---------HHHHHHHTT
T ss_pred HHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh---------HHHHHHHHH
Confidence 3 3334 88999999999887 3333 355677888888888876511 1111111 2
Q ss_pred hCCccccccccCCCCCC-----CCccceeccCCcEEEEEecCCccccc----Ccccc--cCCCCCcEEeccCCcccc---
Q 008026 145 MGYPQRFAENWKGNDPC-----SDWIGVTCTKGNITVINFQKMNLTGT----ISPEF--ASFKSLQRLILADNNLSG--- 210 (580)
Q Consensus 145 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~L~~L~ls~n~l~~~----~p~~~--~~l~~L~~L~ls~N~l~g--- 210 (580)
+.....+....+.++.. ..++..+..+++|+.|+|++|++++. +|..+ +.+++|+.|+|++|++++
T Consensus 212 l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~ 291 (386)
T 2ca6_A 212 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV 291 (386)
T ss_dssp GGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHH
T ss_pred hhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHH
Confidence 23334444555555554 23455566778999999999999976 67777 449999999999999996
Q ss_pred -cCCccC-cCCCCCCEEEccCCcccccCC
Q 008026 211 -MIPEGL-SVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 211 -~~p~~l-~~l~~L~~l~ls~N~l~g~~p 237 (580)
.+|..+ .++++|++|++++|++++..|
T Consensus 292 ~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 292 RTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 488888 668999999999999997664
No 360
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.71 E-value=2.4e-19 Score=182.90 Aligned_cols=124 Identities=15% Similarity=0.087 Sum_probs=96.5
Q ss_pred cccccCCCCCccccccceEEecccCCCCCCCCCc----hhhcCcc-cCceEecccCcCcCCCC-CCCCC-----CCCcEE
Q 008026 2 LQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGI----DVIQNMT-SLKEIWLHSNAFSGPLP-DFSGV-----KQLESL 70 (580)
Q Consensus 2 ~~~~~~~P~~~~~~~l~~L~~~~~~~n~~~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p-~~~~l-----~~L~~L 70 (580)
|+++|.+|+.+ .....|+.+++++|.+....+ ..|.+++ +|++|+|++|.|++..+ .+..+ ++|+.|
T Consensus 8 n~~~~~~~~~~--~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L 85 (362)
T 3goz_A 8 HPGSNPVEEFT--SIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSL 85 (362)
T ss_dssp CTTCCHHHHHH--TSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEE
T ss_pred ccchHHHHHHH--hCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEE
Confidence 67888888876 335557778888887777666 7788888 89999999999998766 34443 899999
Q ss_pred eccCCcccccCCccccCC-----CCCcEEEccCCcccccCCC-----CCc-ccccccccccCCCCCCC
Q 008026 71 SLRDNFFTGPVPDSLVKL-----ESLKIVNMTNNLLQGPVPE-----FDR-SVSLDMAKGSNNFCLPS 127 (580)
Q Consensus 71 ~L~~N~l~~~~P~~~~~l-----~~L~~L~L~~N~l~~~~~~-----~~~-~~~L~~l~l~~n~~~~~ 127 (580)
+|++|++++..+..+... ++|+.|+|++|++++..+. +.. ..+|+.|++++|.+...
T Consensus 86 ~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 86 NLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp ECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred ECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 999999996666654443 8999999999999887763 223 36899999999987643
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=5.1e-18 Score=164.76 Aligned_cols=167 Identities=13% Similarity=0.194 Sum_probs=142.1
Q ss_pred CcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccc
Q 008026 40 NMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKG 119 (580)
Q Consensus 40 ~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l 119 (580)
++..++.+++++|.++... .+..+++|+.|++++|+++ .+| .+..+++|+.|+|++|++++.++ +..+.+|+.|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L 92 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEEC
T ss_pred HHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEEC
Confidence 5778889999999999655 6778999999999999999 788 79999999999999999999888 999999999999
Q ss_pred cCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCc
Q 008026 120 SNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQ 199 (580)
Q Consensus 120 ~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~ 199 (580)
++|.+..+++... .+|+.|+|++|++++ +| .+..+++|+
T Consensus 93 ~~N~l~~l~~~~~---------------------------------------~~L~~L~L~~N~l~~-~~-~l~~l~~L~ 131 (263)
T 1xeu_A 93 NRNRLKNLNGIPS---------------------------------------ACLSRLFLDNNELRD-TD-SLIHLKNLE 131 (263)
T ss_dssp CSSCCSCCTTCCC---------------------------------------SSCCEEECCSSCCSB-SG-GGTTCTTCC
T ss_pred CCCccCCcCcccc---------------------------------------CcccEEEccCCccCC-Ch-hhcCccccc
Confidence 9999887654211 389999999999995 54 699999999
Q ss_pred EEeccCCcccccCCccCcCCCCCCEEEccCCcccccCCCCC---CCceeecCCCCCCC
Q 008026 200 RLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSFK---SNAIVNTDGNPDIG 254 (580)
Q Consensus 200 ~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p~~~---~~~~~~~~~n~~~c 254 (580)
.|+|++|+++ .+| .+..+++|+.|++++|++++. +... ....+++.+|++.|
T Consensus 132 ~L~Ls~N~i~-~~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 132 ILSIRNNKLK-SIV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp EEECTTSCCC-BCG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred EEECCCCcCC-CCh-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccC
Confidence 9999999999 455 699999999999999999976 3221 23457777777544
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.70 E-value=1.4e-19 Score=194.49 Aligned_cols=180 Identities=14% Similarity=0.125 Sum_probs=142.4
Q ss_pred cceEEecccCCCCCCCCCchhhcCcccCceEecccCc-------------CcCCCC-CCCCCCCCcEEe-ccCCcccccC
Q 008026 17 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA-------------FSGPLP-DFSGVKQLESLS-LRDNFFTGPV 81 (580)
Q Consensus 17 l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~p-~~~~l~~L~~L~-L~~N~l~~~~ 81 (580)
++.|..++++.|++ +.+|+.+++|++|+.|++++|. +.+.+| .+..+++|+.|+ ++.|.+. .+
T Consensus 348 ~~~L~~L~Ls~n~L-~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L 425 (567)
T 1dce_A 348 DEQLFRCELSVEKS-TVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-DL 425 (567)
T ss_dssp TTTSSSCCCCHHHH-HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-HH
T ss_pred CccceeccCChhhH-HhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-hh
Confidence 45666777877754 5778899999999999997775 556666 367788888888 6666544 33
Q ss_pred Cc------cccC--CCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCcccccc
Q 008026 82 PD------SLVK--LESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAE 153 (580)
Q Consensus 82 P~------~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 153 (580)
+. .+.. ...|+.|+|++|+|++++ .+..+.+|+.|++++|.+..+|.
T Consensus 426 ~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp-~~~~l~~L~~L~Ls~N~l~~lp~------------------------ 480 (567)
T 1dce_A 426 RSKFLLENSVLKMEYADVRVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPP------------------------ 480 (567)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCCCCCG------------------------
T ss_pred hhhhhhcccccccCccCceEEEecCCCCCCCc-CccccccCcEeecCcccccccch------------------------
Confidence 32 1111 125899999999999865 48999999999999998886653
Q ss_pred ccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccC-CccCcCCCCCCEEEccCCcc
Q 008026 154 NWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMI-PEGLSVLGALKELDVSNNQL 232 (580)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~l~~l~~L~~l~ls~N~l 232 (580)
.++.+++|+.|+|++|+|++ +| .+++|++|+.|+|++|+|++.. |..++.+++|+.|+|++|++
T Consensus 481 -------------~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 481 -------------ALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp -------------GGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred -------------hhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 23345699999999999995 78 8999999999999999999766 99999999999999999999
Q ss_pred cccCCC
Q 008026 233 YGKIPS 238 (580)
Q Consensus 233 ~g~~p~ 238 (580)
++.+|.
T Consensus 546 ~~~~~~ 551 (567)
T 1dce_A 546 CQEEGI 551 (567)
T ss_dssp GGSSSC
T ss_pred CCCccH
Confidence 988764
No 363
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=4.4e-18 Score=188.54 Aligned_cols=144 Identities=15% Similarity=0.104 Sum_probs=80.0
Q ss_pred CchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccc
Q 008026 34 GIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVS 113 (580)
Q Consensus 34 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 113 (580)
.++.|..++.|++|+|++|.|..+++.+..+++|++|+|++|+|+ .+|..|++|++|+.|+|++|+|+.+++.|..+.+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~ 294 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQ 294 (727)
T ss_dssp ------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTT
T ss_pred ChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCC
Confidence 345566666666666666666643334555666666666666666 6666666666666666666666655445666666
Q ss_pred cccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCccccc
Q 008026 114 LDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFA 193 (580)
Q Consensus 114 L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~ 193 (580)
|+.|++++|.+..+|.. +..+.+|+.|+|++|.|++.+|..+.
T Consensus 295 L~~L~L~~N~l~~lp~~-------------------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 295 LKYFYFFDNMVTTLPWE-------------------------------------FGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp CSEEECCSSCCCCCCSS-------------------------------------TTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred CCEEECCCCCCCccChh-------------------------------------hhcCCCccEEeCCCCccCCCChHHHh
Confidence 66666666655544432 11233566666666666666665554
Q ss_pred CCCC-CcEEeccCCcccccCCcc
Q 008026 194 SFKS-LQRLILADNNLSGMIPEG 215 (580)
Q Consensus 194 ~l~~-L~~L~ls~N~l~g~~p~~ 215 (580)
.+.. +..|+|++|.++|.+|.+
T Consensus 338 ~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 338 EKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp HHHHHHHHHHHHHCCCCCCCCCC
T ss_pred hcchhhhHHhhccCcccCcCccc
Confidence 4322 123556666666655543
No 364
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.67 E-value=1.1e-16 Score=162.47 Aligned_cols=209 Identities=15% Similarity=0.078 Sum_probs=156.8
Q ss_pred cccccCCCC-CccccccceEEecccCCCCCCCCCc-hhhcCcccCce-EecccCcCcCCCCC-CCCCCCCcEEeccCCcc
Q 008026 2 LQLIGGLPA-SFSGSQIQSLWVNGQNGNAKLGGGI-DVIQNMTSLKE-IWLHSNAFSGPLPD-FSGVKQLESLSLRDNFF 77 (580)
Q Consensus 2 ~~~~~~~P~-~~~~~~l~~L~~~~~~~n~~~~~~~-~~~~~l~~L~~-L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l 77 (580)
|+|+ .||. .| .++..|+.+++++|++.+.+| ++|.++++|++ ++++.|+|+...|+ |..+++|++|++++|+|
T Consensus 40 N~i~-~i~~~~f--~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l 116 (350)
T 4ay9_X 40 TKLR-VIQKGAF--SGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI 116 (350)
T ss_dssp CCCS-EECTTSS--TTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECC
T ss_pred CcCC-CcCHHHH--cCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccccccc
Confidence 5555 5664 67 568888889999998877665 67899998775 67788999988884 88999999999999999
Q ss_pred cccCCccccCCCCCcEEEccC-CcccccCCC-CCccc-ccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccc
Q 008026 78 TGPVPDSLVKLESLKIVNMTN-NLLQGPVPE-FDRSV-SLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAEN 154 (580)
Q Consensus 78 ~~~~P~~~~~l~~L~~L~L~~-N~l~~~~~~-~~~~~-~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 154 (580)
.+..+..+....++..|++.+ |++..+++. |..+. .++.|++++|.+..+++..+.
T Consensus 117 ~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~--------------------- 175 (350)
T 4ay9_X 117 KHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFN--------------------- 175 (350)
T ss_dssp SSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSST---------------------
T ss_pred ccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhcc---------------------
Confidence 944444577888899999976 678877765 55554 588999999999988876552
Q ss_pred cCCCCCCCCccceeccCCcEEEEEecC-CcccccCcc-cccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcc
Q 008026 155 WKGNDPCSDWIGVTCTKGNITVINFQK-MNLTGTISP-EFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQL 232 (580)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~L~~L~ls~-n~l~~~~p~-~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l 232 (580)
..+|+.|++++ |.+. .+|. .|..+++|+.|||++|+|+ .+|.. .+.+|+.|.+.++.-
T Consensus 176 ----------------~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~--~~~~L~~L~~l~~~~ 235 (350)
T 4ay9_X 176 ----------------GTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSY--GLENLKKLRARSTYN 235 (350)
T ss_dssp ----------------TEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCC-CCCSS--SCTTCCEEECTTCTT
T ss_pred ----------------ccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcC-ccChh--hhccchHhhhccCCC
Confidence 12799999986 5555 6765 5789999999999999999 77763 356677777666655
Q ss_pred cccCCCCCC---CceeecCCCCCCCC
Q 008026 233 YGKIPSFKS---NAIVNTDGNPDIGK 255 (580)
Q Consensus 233 ~g~~p~~~~---~~~~~~~~n~~~c~ 255 (580)
...+|+... ...+.+ .|++.|.
T Consensus 236 l~~lP~l~~l~~L~~l~l-~~~~~c~ 260 (350)
T 4ay9_X 236 LKKLPTLEKLVALMEASL-TYPSHCC 260 (350)
T ss_dssp CCCCCCTTTCCSCCEEEC-SCHHHHH
T ss_pred cCcCCCchhCcChhhCcC-CCCcccc
Confidence 557775422 223333 4666664
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.67 E-value=1.3e-18 Score=187.08 Aligned_cols=174 Identities=14% Similarity=0.073 Sum_probs=139.4
Q ss_pred cCCCCCccccccceEEecccCCCC-------------CCCCCchhhcCcccCceEe-cccCc-------------CcCCC
Q 008026 6 GGLPASFSGSQIQSLWVNGQNGNA-------------KLGGGIDVIQNMTSLKEIW-LHSNA-------------FSGPL 58 (580)
Q Consensus 6 ~~~P~~~~~~~l~~L~~~~~~~n~-------------~~~~~~~~~~~l~~L~~L~-L~~N~-------------l~~~~ 58 (580)
..+|++| .+++.|+.++++.|. ..+..|..+.+|++|+.|+ ++.|. |+..+
T Consensus 362 ~~Lp~~i--~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~l~ 439 (567)
T 1dce_A 362 TVLQSEL--ESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKME 439 (567)
T ss_dssp HHHHHHH--HHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHH--HHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhhhhcccccccC
Confidence 4688888 567788888876654 4556667888888888888 55553 33322
Q ss_pred CCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHH
Q 008026 59 PDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNAL 138 (580)
Q Consensus 59 p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l 138 (580)
+ ..|+.|+|++|+|+ .+|. |+.+++|+.|+|++|+|+.+|+.+..+.+|+.|++++|.+..+|
T Consensus 440 ~-----~~L~~L~Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~lp---------- 502 (567)
T 1dce_A 440 Y-----ADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD---------- 502 (567)
T ss_dssp H-----TTCSEEECTTSCCS-SCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG----------
T ss_pred c-----cCceEEEecCCCCC-CCcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCCCc----------
Confidence 2 25899999999999 5887 99999999999999999977778999999999999999887654
Q ss_pred HHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccC-cccccCCCCCcEEeccCCcccccCCccC-
Q 008026 139 LSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI-SPEFASFKSLQRLILADNNLSGMIPEGL- 216 (580)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~-p~~~~~l~~L~~L~ls~N~l~g~~p~~l- 216 (580)
.++.+++|+.|+|++|+|++.. |..++.|++|+.|+|++|+|++..| .+
T Consensus 503 ----------------------------~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~ 553 (567)
T 1dce_A 503 ----------------------------GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG-IQE 553 (567)
T ss_dssp ----------------------------GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS-CTT
T ss_pred ----------------------------ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc-HHH
Confidence 1233458999999999999776 9999999999999999999995544 33
Q ss_pred ---cCCCCCCEEEc
Q 008026 217 ---SVLGALKELDV 227 (580)
Q Consensus 217 ---~~l~~L~~l~l 227 (580)
..+++|+.||+
T Consensus 554 ~l~~~lp~L~~L~l 567 (567)
T 1dce_A 554 RLAEMLPSVSSILT 567 (567)
T ss_dssp HHHHHCTTCSEEEC
T ss_pred HHHHHCcccCccCC
Confidence 33889999975
No 366
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=4.9e-16 Score=143.19 Aligned_cols=126 Identities=22% Similarity=0.317 Sum_probs=103.1
Q ss_pred ceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCC
Q 008026 45 KEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNF 123 (580)
Q Consensus 45 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~ 123 (580)
+++++++|.++..++.+. ++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|+++++. |..+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l------------ 77 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNM------------ 77 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTC------------
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCC------------
Confidence 678999999986654443 68999999999998 8998899999999999999999887764 2222
Q ss_pred CCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEec
Q 008026 124 CLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLIL 203 (580)
Q Consensus 124 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l 203 (580)
.+|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 78 ------------------------------------------------~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 78 ------------------------------------------------TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp ------------------------------------------------TTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred ------------------------------------------------CCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 37888889999999777778999999999999
Q ss_pred cCCcccccCCccCcCCCCCCEEEccCCccc
Q 008026 204 ADNNLSGMIPEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 204 s~N~l~g~~p~~l~~l~~L~~l~ls~N~l~ 233 (580)
++|+|++..+..+..+++|+.|+|++|++.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 999999544456888999999988777665
No 367
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.8e-17 Score=183.69 Aligned_cols=184 Identities=14% Similarity=0.034 Sum_probs=119.1
Q ss_pred CCCCccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccC
Q 008026 8 LPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVK 87 (580)
Q Consensus 8 ~P~~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~ 87 (580)
.|..| ..+..|+.|++++|.+. .+|..+.++++|++|+|++|.|+.+++.|.+|++|++|+|++|+|+ .+|..|++
T Consensus 216 ~~~~~--~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 216 PKDSK--YDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp --------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred Chhhh--ccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 35566 56788889999999765 6777788999999999999999944446999999999999999999 89999999
Q ss_pred CCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccce
Q 008026 88 LESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGV 167 (580)
Q Consensus 88 l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (580)
|++|++|+|++|.|+.+++.|..+.+|+.|++++|.+...++..+..+..
T Consensus 292 l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~------------------------------ 341 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV------------------------------ 341 (727)
T ss_dssp GTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH------------------------------
T ss_pred CCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcch------------------------------
Confidence 99999999999999988888999999999999999988665544332211
Q ss_pred eccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCC--------cccccCCccCcCCCCCCEEEccCCcccccC
Q 008026 168 TCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADN--------NLSGMIPEGLSVLGALKELDVSNNQLYGKI 236 (580)
Q Consensus 168 ~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N--------~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~ 236 (580)
.+..|+|++|.+++.+|.++ ..|++++| .|.+.++..+.++..+....+++|-+.+..
T Consensus 342 -----~~~~l~l~~N~l~~~~p~~l------~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~ 407 (727)
T 4b8c_D 342 -----TGLIFYLRDNRPEIPLPHER------RFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHY 407 (727)
T ss_dssp -----HHHHHHHHHCCCCCCCCCC-----------------------------------------------CCCGGG
T ss_pred -----hhhHHhhccCcccCcCcccc------ceeEeecccccccccCCccccccchhhcccccceeeeecccccccc
Confidence 11125677888888887654 44555555 444444555566777777788888776443
No 368
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=2.7e-16 Score=144.95 Aligned_cols=130 Identities=16% Similarity=0.170 Sum_probs=110.7
Q ss_pred cEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCC
Q 008026 68 ESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGY 147 (580)
Q Consensus 68 ~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~ 147 (580)
+.+++++|++. .+|..+.. +|+.|+|++|+++++++.-
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~--------------------------------------- 48 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDG--------------------------------------- 48 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSC---------------------------------------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCcc---------------------------------------
Confidence 78999999997 89987754 8999999999998877630
Q ss_pred ccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEc
Q 008026 148 PQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDV 227 (580)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l 227 (580)
.+..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|++|+|
T Consensus 49 -------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 49 -------------------LFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp -------------------SGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred -------------------ccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 0112237999999999999888999999999999999999999888888999999999999
Q ss_pred cCCcccccCCCCCC----CceeecCCCCCCCCCCC
Q 008026 228 SNNQLYGKIPSFKS----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 228 s~N~l~g~~p~~~~----~~~~~~~~n~~~c~~~~ 258 (580)
++|++++.+|..+. ...+++++|+|.|.++.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 99999999887764 34689999999998753
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.67 E-value=2e-16 Score=146.50 Aligned_cols=148 Identities=11% Similarity=0.084 Sum_probs=122.2
Q ss_pred CCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHH
Q 008026 62 SGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSV 141 (580)
Q Consensus 62 ~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~ 141 (580)
..+++|+.|++++|++. .+| .+..+++|+.|++++|.++.. +.+..+.+|+.|++++|.+....+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~----------- 106 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIP----------- 106 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSC-----------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccCh-----------
Confidence 55889999999999999 888 799999999999999977654 4688899999999999987642221
Q ss_pred HHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCc-ccccCCccCcCCC
Q 008026 142 VKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNN-LSGMIPEGLSVLG 220 (580)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~l~~l~ 220 (580)
.+..+++|+.|++++|++++..|..++.+++|++|+|++|+ +. .+| .+..++
T Consensus 107 -------------------------~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~ 159 (197)
T 4ezg_A 107 -------------------------NLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLP 159 (197)
T ss_dssp -------------------------CCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCS
T ss_pred -------------------------hhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCC
Confidence 22344599999999999998899999999999999999998 65 777 699999
Q ss_pred CCCEEEccCCcccccCCCC---CCCceeecCCCC
Q 008026 221 ALKELDVSNNQLYGKIPSF---KSNAIVNTDGNP 251 (580)
Q Consensus 221 ~L~~l~ls~N~l~g~~p~~---~~~~~~~~~~n~ 251 (580)
+|+.|++++|++++. +.. .....+++.+|+
T Consensus 160 ~L~~L~l~~n~i~~~-~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 160 ELKSLNIQFDGVHDY-RGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp SCCEEECTTBCCCCC-TTGGGCSSCCEEEECBC-
T ss_pred CCCEEECCCCCCcCh-HHhccCCCCCEEEeeCcc
Confidence 999999999999963 322 123457777775
No 370
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.67 E-value=4.3e-18 Score=173.60 Aligned_cols=125 Identities=15% Similarity=0.098 Sum_probs=94.5
Q ss_pred cccccCCC----CCccccccc-eEEecccCCCCCCCCCchhhcCc-----ccCceEecccCcCcCCCCC-----CCCC-C
Q 008026 2 LQLIGGLP----ASFSGSQIQ-SLWVNGQNGNAKLGGGIDVIQNM-----TSLKEIWLHSNAFSGPLPD-----FSGV-K 65 (580)
Q Consensus 2 ~~~~~~~P----~~~~~~~l~-~L~~~~~~~n~~~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~-----~~~l-~ 65 (580)
|++.+.-+ +.| .++. .|+.+++++|.+....+..|..+ ++|++|+|++|.+++..+. +..+ +
T Consensus 32 n~l~~~~~~~l~~~l--~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~ 109 (362)
T 3goz_A 32 NNLYSISTVELIQAF--ANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPF 109 (362)
T ss_dssp SCGGGSCHHHHHHHH--HTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred CCCChHHHHHHHHHH--HhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCC
Confidence 55555555 344 3455 78888899998888778777776 9999999999999987764 4445 8
Q ss_pred CCcEEeccCCcccccCCccccC-----CCCCcEEEccCCcccccCCC-----CCccc-ccccccccCCCCCCCC
Q 008026 66 QLESLSLRDNFFTGPVPDSLVK-----LESLKIVNMTNNLLQGPVPE-----FDRSV-SLDMAKGSNNFCLPSP 128 (580)
Q Consensus 66 ~L~~L~L~~N~l~~~~P~~~~~-----l~~L~~L~L~~N~l~~~~~~-----~~~~~-~L~~l~l~~n~~~~~~ 128 (580)
+|+.|+|++|+|++..+..+.. .++|++|+|++|+++..... +.... +|+.|++++|.+....
T Consensus 110 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 110 TITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred CccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 9999999999999655545443 36999999999999864432 23343 8999999999887654
No 371
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.66 E-value=2.5e-17 Score=166.09 Aligned_cols=195 Identities=16% Similarity=0.120 Sum_probs=123.0
Q ss_pred ecccCCCCCCCCCchhhcCc--ccCceEecccCcCcCCCCCCCCCCCCcEEeccCCccccc-CCccccCCCCCcEEEccC
Q 008026 22 VNGQNGNAKLGGGIDVIQNM--TSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGP-VPDSLVKLESLKIVNMTN 98 (580)
Q Consensus 22 ~~~~~~n~~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~-~P~~~~~l~~L~~L~L~~ 98 (580)
.++++.+.+. +..+..+ +.++.|++++|.+++.++.+..+++|+.|+|++|.+++. +|..+..+++|+.|+|++
T Consensus 51 ~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~ 127 (336)
T 2ast_B 51 TLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 127 (336)
T ss_dssp EEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred eeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcC
Confidence 3444444333 5566666 778888888888887777766778888888888887754 777778888888888888
Q ss_pred CcccccCC-CCCcccccccccccCC-CCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCC-CCCC--ccceeccCC-
Q 008026 99 NLLQGPVP-EFDRSVSLDMAKGSNN-FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGND-PCSD--WIGVTCTKG- 172 (580)
Q Consensus 99 N~l~~~~~-~~~~~~~L~~l~l~~n-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~- 172 (580)
|.+++..+ .+..+.+|+.|++++| .+... .+.. ....+..+....+.++ ...+ ++..+..++
T Consensus 128 ~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~------~l~~------~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~ 195 (336)
T 2ast_B 128 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF------ALQT------LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSE 195 (336)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHH------HHHH------HHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCT
T ss_pred cccCHHHHHHHhcCCCCCEEECCCCCCCCHH------HHHH------HHhcCCCCCEEcCCCCCCcChHHHHHHHHhccc
Confidence 87775544 3666777888888877 33310 1111 1111222333333333 2221 233445556
Q ss_pred cEEEEEecCC--ccc-ccCcccccCCCCCcEEeccCCc-ccccCCccCcCCCCCCEEEccCCc
Q 008026 173 NITVINFQKM--NLT-GTISPEFASFKSLQRLILADNN-LSGMIPEGLSVLGALKELDVSNNQ 231 (580)
Q Consensus 173 ~L~~L~ls~n--~l~-~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~l~~l~~L~~l~ls~N~ 231 (580)
+|+.|++++| .++ +.+|..+.++++|+.|+|++|. +++..+..+..+++|++|++++|.
T Consensus 196 ~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 196 TITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp TCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 7777777777 344 4566666677777777777777 555666677777777777777774
No 372
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.65 E-value=7.5e-18 Score=169.93 Aligned_cols=198 Identities=17% Similarity=0.090 Sum_probs=113.5
Q ss_pred ceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCC-CC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 18 QSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGP-LP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 18 ~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
..|+.++++.|.+.+..+ .+.++++|++|+|++|.+++. +| .+..+++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccch-hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 334444444443333322 244556666666666665543 33 245556666666666665555555566666666666
Q ss_pred ccCC-ccccc-CC-CCCcccccccccccCC-CCCCCCCCCchhHHHHHHHHHhhCCcc-ccccccCCCCC--C--CCccc
Q 008026 96 MTNN-LLQGP-VP-EFDRSVSLDMAKGSNN-FCLPSPGACDPRLNALLSVVKLMGYPQ-RFAENWKGNDP--C--SDWIG 166 (580)
Q Consensus 96 L~~N-~l~~~-~~-~~~~~~~L~~l~l~~n-~~~~~~~~~~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~--~--~~~~~ 166 (580)
|++| .+++. ++ .+..+.+|+.|++++| .+... .+. .....++ .+....+.++. . ..++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~------~~~------~~~~~l~~~L~~L~l~~~~~~~~~~~l~~ 216 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK------HVQ------VAVAHVSETITQLNLSGYRKNLQKSDLST 216 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH------HHH------HHHHHSCTTCCEEECCSCGGGSCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH------HHH------HHHHhcccCCCEEEeCCCcccCCHHHHHH
Confidence 6666 45431 22 2445555666666655 43310 000 0011111 22222233221 1 11233
Q ss_pred eeccCCcEEEEEecCCc-ccccCcccccCCCCCcEEeccCCcccccCCc---cCcCCCCCCEEEccCC
Q 008026 167 VTCTKGNITVINFQKMN-LTGTISPEFASFKSLQRLILADNNLSGMIPE---GLSVLGALKELDVSNN 230 (580)
Q Consensus 167 ~~~~~~~L~~L~ls~n~-l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~---~l~~l~~L~~l~ls~N 230 (580)
.+..+++|+.|++++|. +++..+..+.++++|+.|+|++|. +..|. .+..+++|+.|++++|
T Consensus 217 ~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 217 LVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp HHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred HHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 44456799999999999 777888899999999999999996 23343 5888999999999999
No 373
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2e-16 Score=142.46 Aligned_cols=131 Identities=22% Similarity=0.255 Sum_probs=93.7
Q ss_pred CcccCceEecccCcCc-CCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccc
Q 008026 40 NMTSLKEIWLHSNAFS-GPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMA 117 (580)
Q Consensus 40 ~l~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l 117 (580)
..++|++|+|++|.++ +.+| .+..+++|++|+|++|+++ .+ ..+..+++|+.|+|++|++++.+|.+..
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~------- 92 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKKLELSENRIFGGLDMLAE------- 92 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-CC-SSCCCCSSCCEEEEESCCCCSCCCHHHH-------
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-Ch-hhhccCCCCCEEECcCCcCchHHHHHHh-------
Confidence 3467888888888887 5555 4677888888888888888 44 6788888888888888888876553111
Q ss_pred cccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCc--ccccCC
Q 008026 118 KGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTIS--PEFASF 195 (580)
Q Consensus 118 ~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p--~~~~~l 195 (580)
.+++|+.|+|++|++++ +| ..+..+
T Consensus 93 ----------------------------------------------------~l~~L~~L~Ls~N~l~~-~~~~~~l~~l 119 (168)
T 2ell_A 93 ----------------------------------------------------KLPNLTHLNLSGNKLKD-ISTLEPLKKL 119 (168)
T ss_dssp ----------------------------------------------------HCTTCCEEECBSSSCCS-SGGGGGGSSC
T ss_pred ----------------------------------------------------hCCCCCEEeccCCccCc-chhHHHHhcC
Confidence 12366777777777763 33 567777
Q ss_pred CCCcEEeccCCcccccCCc----cCcCCCCCCEEEccCCccc
Q 008026 196 KSLQRLILADNNLSGMIPE----GLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 196 ~~L~~L~ls~N~l~g~~p~----~l~~l~~L~~l~ls~N~l~ 233 (580)
++|+.|++++|+++ .+|. .+..+++|++|++++|.+.
T Consensus 120 ~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 120 ECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp SCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred CCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777777777777 4443 6777777777777777776
No 374
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=3.8e-16 Score=140.68 Aligned_cols=112 Identities=19% Similarity=0.222 Sum_probs=96.9
Q ss_pred CCCCcEEeccCCccc-ccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHH
Q 008026 64 VKQLESLSLRDNFFT-GPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVV 142 (580)
Q Consensus 64 l~~L~~L~L~~N~l~-~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~ 142 (580)
.++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.+++. +.+..
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~-------------------------------- 69 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPK-------------------------------- 69 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCC--------------------------------
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhcc--------------------------------
Confidence 478999999999998 78999899999999999999998876 33322
Q ss_pred HhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCC--ccCcCCC
Q 008026 143 KLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIP--EGLSVLG 220 (580)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p--~~l~~l~ 220 (580)
+++|+.|+|++|++.+.+|..+.++++|+.|+|++|+++ .+| ..+..++
T Consensus 70 ----------------------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~l~~l~ 120 (168)
T 2ell_A 70 ----------------------------LPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK-DISTLEPLKKLE 120 (168)
T ss_dssp ----------------------------CSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCC-SSGGGGGGSSCS
T ss_pred ----------------------------CCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccC-cchhHHHHhcCC
Confidence 237889999999999778888888999999999999998 554 7899999
Q ss_pred CCCEEEccCCcccccCC
Q 008026 221 ALKELDVSNNQLYGKIP 237 (580)
Q Consensus 221 ~L~~l~ls~N~l~g~~p 237 (580)
+|++|++++|++++..+
T Consensus 121 ~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 121 CLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CCCEEECCSSGGGTSTT
T ss_pred CCCEEEeeCCcCcchHH
Confidence 99999999999997655
No 375
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.4e-15 Score=138.16 Aligned_cols=133 Identities=19% Similarity=0.215 Sum_probs=100.6
Q ss_pred cCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCC-CcccccccccccC
Q 008026 43 SLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF-DRSVSLDMAKGSN 121 (580)
Q Consensus 43 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~L~~l~l~~ 121 (580)
+.+.+++++|+++..+..+ .++|+.|+|++|++++..|..|..+++|+.|+|++|++++.++.. ..
T Consensus 8 ~~~~l~~~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~----------- 74 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDK----------- 74 (177)
T ss_dssp ETTEEECCSSCCSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT-----------
T ss_pred CCCEEEecCCCCccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccC-----------
Confidence 3567888888888655443 367888888888888444445788888888888888888766541 22
Q ss_pred CCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEE
Q 008026 122 NFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRL 201 (580)
Q Consensus 122 n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L 201 (580)
+.+|+.|+|++|++++..+..+..+++|+.|
T Consensus 75 -------------------------------------------------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 105 (177)
T 2o6r_A 75 -------------------------------------------------LTKLTILYLHENKLQSLPNGVFDKLTQLKEL 105 (177)
T ss_dssp -------------------------------------------------CTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred -------------------------------------------------CCccCEEECCCCCccccCHHHhhCCcccCEE
Confidence 2367888888888886666667889999999
Q ss_pred eccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 202 ILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 202 ~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
+|++|++++..+..+..+++|++|++++|++++..|
T Consensus 106 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 106 ALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999999984444456789999999999999987665
No 376
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=140.28 Aligned_cols=128 Identities=15% Similarity=0.182 Sum_probs=106.1
Q ss_pred cEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCC
Q 008026 68 ESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGY 147 (580)
Q Consensus 68 ~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~ 147 (580)
+++++++|+++ .+|..+. ++|+.|+|++|+|+.+++.|..
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~------------------------------------- 52 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSN------------------------------------- 52 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGG-------------------------------------
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhc-------------------------------------
Confidence 67899999998 8887763 6889999999988855433222
Q ss_pred ccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEc
Q 008026 148 PQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDV 227 (580)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l 227 (580)
+.+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|
T Consensus 53 -----------------------l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 53 -----------------------YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp -----------------------CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred -----------------------ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 237889999999999777788999999999999999999777788999999999999
Q ss_pred cCCcccccCCCCCC----CceeecCCCCCCCCCCC
Q 008026 228 SNNQLYGKIPSFKS----NAIVNTDGNPDIGKEKS 258 (580)
Q Consensus 228 s~N~l~g~~p~~~~----~~~~~~~~n~~~c~~~~ 258 (580)
++|++++..+..+. ...+.+.+|+|.|+|..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 99999976665443 35689999999998864
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=5.4e-16 Score=136.66 Aligned_cols=129 Identities=21% Similarity=0.253 Sum_probs=102.5
Q ss_pred CcccCceEecccCcCc-CCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccc
Q 008026 40 NMTSLKEIWLHSNAFS-GPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMA 117 (580)
Q Consensus 40 ~l~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l 117 (580)
..++|++|++++|.++ +.+| .+..+++|+.|+|++|++++ + ..+..+++|+.|+|++|++++.+|.+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~Ls~n~i~~~~~~~--------- 83 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS-I-ANLPKLNKLKKLELSDNRVSGGLEVL--------- 83 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCC-C-TTCCCCTTCCEEECCSSCCCSCTHHH---------
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCC-c-hhhhcCCCCCEEECCCCcccchHHHH---------
Confidence 3478999999999998 5555 56889999999999999984 4 77889999999999999988755421
Q ss_pred cccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCccccc-CcccccCCC
Q 008026 118 KGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT-ISPEFASFK 196 (580)
Q Consensus 118 ~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~-~p~~~~~l~ 196 (580)
+..+++|+.|++++|++++. .|..++.++
T Consensus 84 --------------------------------------------------~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~ 113 (149)
T 2je0_A 84 --------------------------------------------------AEKCPNLTHLNLSGNKIKDLSTIEPLKKLE 113 (149)
T ss_dssp --------------------------------------------------HHHCTTCCEEECTTSCCCSHHHHGGGGGCT
T ss_pred --------------------------------------------------hhhCCCCCEEECCCCcCCChHHHHHHhhCC
Confidence 11123788899999999853 447899999
Q ss_pred CCcEEeccCCcccccCC---ccCcCCCCCCEEEccC
Q 008026 197 SLQRLILADNNLSGMIP---EGLSVLGALKELDVSN 229 (580)
Q Consensus 197 ~L~~L~ls~N~l~g~~p---~~l~~l~~L~~l~ls~ 229 (580)
+|+.|++++|++++..+ ..+..+++|++||+++
T Consensus 114 ~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 114 NLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999999985444 4788899999999864
No 378
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=5.8e-16 Score=140.61 Aligned_cols=134 Identities=18% Similarity=0.185 Sum_probs=105.8
Q ss_pred hhcCcccCceEecccCcCcCCCCCCCCCC-CCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccc
Q 008026 37 VIQNMTSLKEIWLHSNAFSGPLPDFSGVK-QLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLD 115 (580)
Q Consensus 37 ~~~~l~~L~~L~L~~N~l~~~~p~~~~l~-~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~ 115 (580)
.+.++.+|++|+|++|+++.. |.+..+. +|+.|+|++|+|++ + ..|..+++|+.|+|++|+++++++.+
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~------- 83 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGL------- 83 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCH-------
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcch-------
Confidence 456788888899999888854 6665544 88889998888884 4 57888888888888888888776542
Q ss_pred cccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcc--ccc
Q 008026 116 MAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISP--EFA 193 (580)
Q Consensus 116 ~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~--~~~ 193 (580)
+..+++|+.|++++|++. .+|. .+.
T Consensus 84 ----------------------------------------------------~~~l~~L~~L~L~~N~i~-~~~~~~~l~ 110 (176)
T 1a9n_A 84 ----------------------------------------------------DQALPDLTELILTNNSLV-ELGDLDPLA 110 (176)
T ss_dssp ----------------------------------------------------HHHCTTCCEEECCSCCCC-CGGGGGGGG
T ss_pred ----------------------------------------------------hhcCCCCCEEECCCCcCC-cchhhHhhh
Confidence 012237888888888886 6776 788
Q ss_pred CCCCCcEEeccCCcccccCCcc----CcCCCCCCEEEccCCcccc
Q 008026 194 SFKSLQRLILADNNLSGMIPEG----LSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 194 ~l~~L~~L~ls~N~l~g~~p~~----l~~l~~L~~l~ls~N~l~g 234 (580)
.+++|+.|++++|.+. .+|.. +..+++|+.||+++|....
T Consensus 111 ~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 111 SLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp GCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred cCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 8999999999999998 77775 8889999999999998763
No 379
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=8.5e-16 Score=135.35 Aligned_cols=128 Identities=14% Similarity=0.121 Sum_probs=106.5
Q ss_pred cceEEecccCCCCCC-CCCchhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEE
Q 008026 17 IQSLWVNGQNGNAKL-GGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 95 (580)
Q Consensus 17 l~~L~~~~~~~n~~~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~ 95 (580)
...|+.+++++|.+. +..|..+..+++|++|+|++|.+++. +.+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 355666777778776 57788889999999999999999987 7789999999999999999976898899999999999
Q ss_pred ccCCcccccC--CCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCc
Q 008026 96 MTNNLLQGPV--PEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGN 173 (580)
Q Consensus 96 L~~N~l~~~~--~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (580)
|++|++++.+ +.+. .+++
T Consensus 95 ls~N~i~~~~~~~~~~------------------------------------------------------------~l~~ 114 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLK------------------------------------------------------------KLEN 114 (149)
T ss_dssp CTTSCCCSHHHHGGGG------------------------------------------------------------GCTT
T ss_pred CCCCcCCChHHHHHHh------------------------------------------------------------hCCC
Confidence 9999998753 2222 2347
Q ss_pred EEEEEecCCcccccCc---ccccCCCCCcEEeccC
Q 008026 174 ITVINFQKMNLTGTIS---PEFASFKSLQRLILAD 205 (580)
Q Consensus 174 L~~L~ls~n~l~~~~p---~~~~~l~~L~~L~ls~ 205 (580)
|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 115 L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 115 LKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8899999999986544 4788999999999874
No 380
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=3.3e-17 Score=151.93 Aligned_cols=154 Identities=22% Similarity=0.230 Sum_probs=97.4
Q ss_pred hcCcccCceEecccCcCcCCCCC-------CCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCc
Q 008026 38 IQNMTSLKEIWLHSNAFSGPLPD-------FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDR 110 (580)
Q Consensus 38 ~~~l~~L~~L~L~~N~l~~~~p~-------~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 110 (580)
+.....++.++++.|.++|..|. +..+++|++|+|++|+++ .+| .+..+++|+.|+|++|+++.+++.+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-~l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIKKIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-CCC-CHHHHTTCCEEEEEEEEECSCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-ccc-ccccCCCCCEEECCCCCcccccchhhc
Confidence 44555666667777777666553 455667777777777776 366 667777777777777777654443444
Q ss_pred ccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCc-
Q 008026 111 SVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTIS- 189 (580)
Q Consensus 111 ~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p- 189 (580)
+.+|+.|++++|.+..++ .+. .+++|+.|++++|++++..+
T Consensus 92 ~~~L~~L~L~~N~l~~l~-----~~~---------------------------------~l~~L~~L~l~~N~i~~~~~~ 133 (198)
T 1ds9_A 92 ADTLEELWISYNQIASLS-----GIE---------------------------------KLVNLRVLYMSNNKITNWGEI 133 (198)
T ss_dssp HHHCSEEEEEEEECCCHH-----HHH---------------------------------HHHHSSEEEESEEECCCHHHH
T ss_pred CCcCCEEECcCCcCCcCC-----ccc---------------------------------cCCCCCEEECCCCcCCchhHH
Confidence 455566666665554332 011 11267778888888773222
Q ss_pred ccccCCCCCcEEeccCCcccccCCcc----------CcCCCCCCEEEccCCccc
Q 008026 190 PEFASFKSLQRLILADNNLSGMIPEG----------LSVLGALKELDVSNNQLY 233 (580)
Q Consensus 190 ~~~~~l~~L~~L~ls~N~l~g~~p~~----------l~~l~~L~~l~ls~N~l~ 233 (580)
..+..+++|+.|++++|++.+.+|.. +..+++|+.|| +|.++
T Consensus 134 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 134 DKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred HHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 36777888888888888887666553 67778888776 56555
No 381
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.56 E-value=5.6e-17 Score=170.97 Aligned_cols=226 Identities=15% Similarity=0.062 Sum_probs=139.0
Q ss_pred ceEEecccCCCCCCCCC----chhhcCcccCceEecccCcCcCCCC-CCC-----CCCCCcEEeccCCccccc----CCc
Q 008026 18 QSLWVNGQNGNAKLGGG----IDVIQNMTSLKEIWLHSNAFSGPLP-DFS-----GVKQLESLSLRDNFFTGP----VPD 83 (580)
Q Consensus 18 ~~L~~~~~~~n~~~~~~----~~~~~~l~~L~~L~L~~N~l~~~~p-~~~-----~l~~L~~L~L~~N~l~~~----~P~ 83 (580)
..|+.+++++|.+.... +..+..+++|++|+|++|.++...+ .+. .+++|+.|+|++|++++. +|.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 45777777777666543 4566778899999999998876433 222 256889999999988853 577
Q ss_pred cccCCCCCcEEEccCCcccccC-----CC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCC
Q 008026 84 SLVKLESLKIVNMTNNLLQGPV-----PE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKG 157 (580)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~-----~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 157 (580)
.+..+++|+.|+|++|+++... +. +..+.+|+.|++++|.+.... ...+...+.....+....++
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~---------~~~l~~~l~~~~~L~~L~Ls 292 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKG---------CGDLCRVLRAKESLKELSLA 292 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH---------HHHHHHHHHHCTTCCEEECT
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHH---------HHHHHHHHhhCCCcceEECC
Confidence 7888899999999999887642 22 235678888888888765321 11111111112233333334
Q ss_pred CCCCCCc-cceecc-----CCcEEEEEecCCccccc----CcccccCCCCCcEEeccCCcccccCCccCcC-----CCCC
Q 008026 158 NDPCSDW-IGVTCT-----KGNITVINFQKMNLTGT----ISPEFASFKSLQRLILADNNLSGMIPEGLSV-----LGAL 222 (580)
Q Consensus 158 ~~~~~~~-~~~~~~-----~~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~-----l~~L 222 (580)
++...+. +..++. .++|+.|++++|.+++. +|..+..+++|++|+|++|++.+..+..+.. .++|
T Consensus 293 ~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 372 (461)
T 1z7x_W 293 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL 372 (461)
T ss_dssp TCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCC
T ss_pred CCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCce
Confidence 3333210 001111 13677777777777754 4566667777777777777776544444432 5677
Q ss_pred CEEEccCCcccc----cCCCCC----CCceeecCCCCC
Q 008026 223 KELDVSNNQLYG----KIPSFK----SNAIVNTDGNPD 252 (580)
Q Consensus 223 ~~l~ls~N~l~g----~~p~~~----~~~~~~~~~n~~ 252 (580)
++|++++|++++ .+|..+ ....+++++|+.
T Consensus 373 ~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 373 RVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp CEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred EEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 777777777774 444332 234466666653
No 382
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.55 E-value=7.4e-17 Score=170.08 Aligned_cols=208 Identities=15% Similarity=0.107 Sum_probs=127.9
Q ss_pred eEEecccCCCCCCC----CCchhhcCcccCceEecccCcCcCCCC-C-----CCCCCCCcEEeccCCccccc----CCcc
Q 008026 19 SLWVNGQNGNAKLG----GGIDVIQNMTSLKEIWLHSNAFSGPLP-D-----FSGVKQLESLSLRDNFFTGP----VPDS 84 (580)
Q Consensus 19 ~L~~~~~~~n~~~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p-~-----~~~l~~L~~L~L~~N~l~~~----~P~~ 84 (580)
.|+.+++++|.+.. .++..+.++++|++|+|++|.++...+ . +...++|+.|+|++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 57777888887664 447888999999999999999875433 1 23366899999999999863 4667
Q ss_pred ccCCCCCcEEEccCCcccccCCC-CC-----cccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCC
Q 008026 85 LVKLESLKIVNMTNNLLQGPVPE-FD-----RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGN 158 (580)
Q Consensus 85 ~~~l~~L~~L~L~~N~l~~~~~~-~~-----~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 158 (580)
+..+++|+.|+|++|.++...+. +. ...+|+.|++++|.+.... ...+ ...+.....+....+.+
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~------~~~l---~~~l~~~~~L~~L~Ls~ 236 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN------CRDL---CGIVASKASLRELALGS 236 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH------HHHH---HHHHHHCTTCCEEECCS
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH------HHHH---HHHHHhCCCccEEeccC
Confidence 78889999999999998765432 22 2447888899988776432 1111 11111122222223333
Q ss_pred CCCCCc------cceeccCCcEEEEEecCCccccc----CcccccCCCCCcEEeccCCcccccCCccCcC-----CCCCC
Q 008026 159 DPCSDW------IGVTCTKGNITVINFQKMNLTGT----ISPEFASFKSLQRLILADNNLSGMIPEGLSV-----LGALK 223 (580)
Q Consensus 159 ~~~~~~------~~~~~~~~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~-----l~~L~ 223 (580)
+...+. ++....+++|+.|++++|+++.. ++..+.++++|++|+|++|++.+..+..+.. .++|+
T Consensus 237 n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~ 316 (461)
T 1z7x_W 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLE 316 (461)
T ss_dssp SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCC
T ss_pred CcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccce
Confidence 322211 11111234677777777776643 5566666677777777777665433333322 24666
Q ss_pred EEEccCCccccc
Q 008026 224 ELDVSNNQLYGK 235 (580)
Q Consensus 224 ~l~ls~N~l~g~ 235 (580)
+|++++|++++.
T Consensus 317 ~L~L~~n~l~~~ 328 (461)
T 1z7x_W 317 SLWVKSCSFTAA 328 (461)
T ss_dssp EEECTTSCCBGG
T ss_pred eeEcCCCCCchH
Confidence 666666666643
No 383
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=3.5e-15 Score=135.40 Aligned_cols=130 Identities=13% Similarity=0.064 Sum_probs=105.0
Q ss_pred cccceEEecccCCCCCCCCCchhhcCcc-cCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCcc-ccCCCCCc
Q 008026 15 SQIQSLWVNGQNGNAKLGGGIDVIQNMT-SLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDS-LVKLESLK 92 (580)
Q Consensus 15 ~~l~~L~~~~~~~n~~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~-~~~l~~L~ 92 (580)
.++..|+.+++++|++.. .+. +..+. +|++|+|++|.|++. +.|..+++|++|+|++|+|+ .+|.. +..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCC
Confidence 356778888888886664 444 55555 999999999999986 78999999999999999999 56655 59999999
Q ss_pred EEEccCCcccccCC--CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceecc
Q 008026 93 IVNMTNNLLQGPVP--EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCT 170 (580)
Q Consensus 93 ~L~L~~N~l~~~~~--~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (580)
.|+|++|+++..++ .+. .
T Consensus 92 ~L~L~~N~i~~~~~~~~l~------------------------------------------------------------~ 111 (176)
T 1a9n_A 92 ELILTNNSLVELGDLDPLA------------------------------------------------------------S 111 (176)
T ss_dssp EEECCSCCCCCGGGGGGGG------------------------------------------------------------G
T ss_pred EEECCCCcCCcchhhHhhh------------------------------------------------------------c
Confidence 99999999976543 121 2
Q ss_pred CCcEEEEEecCCcccccCccc----ccCCCCCcEEeccCCccc
Q 008026 171 KGNITVINFQKMNLTGTISPE----FASFKSLQRLILADNNLS 209 (580)
Q Consensus 171 ~~~L~~L~ls~n~l~~~~p~~----~~~l~~L~~L~ls~N~l~ 209 (580)
+++|+.|++++|.+. .+|.. +..+++|+.||+++|.+.
T Consensus 112 l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 112 LKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 237888889999888 66764 888999999999999876
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.53 E-value=4.2e-14 Score=128.39 Aligned_cols=128 Identities=24% Similarity=0.243 Sum_probs=98.9
Q ss_pred cccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcc
Q 008026 23 NGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLL 101 (580)
Q Consensus 23 ~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l 101 (580)
+++++++ ++.+|..+ .++|++|+|++|++++.++. |..+++|++|+|++|+|++..|..|..+++|+.|+|++|++
T Consensus 12 l~~~~~~-l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 12 IRCNSKG-LTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EECCSSC-CSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCC-CccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 4455554 44455433 36999999999999988774 78899999999999999944444589999999999999999
Q ss_pred cccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEec
Q 008026 102 QGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQ 180 (580)
Q Consensus 102 ~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls 180 (580)
++.++. +..+ ++|+.|+++
T Consensus 89 ~~~~~~~~~~l------------------------------------------------------------~~L~~L~l~ 108 (177)
T 2o6r_A 89 QSLPNGVFDKL------------------------------------------------------------TQLKELALD 108 (177)
T ss_dssp CCCCTTTTTTC------------------------------------------------------------TTCCEEECC
T ss_pred cccCHHHhhCC------------------------------------------------------------cccCEEECc
Confidence 988774 2222 267888888
Q ss_pred CCcccccCcccccCCCCCcEEeccCCcccccCC
Q 008026 181 KMNLTGTISPEFASFKSLQRLILADNNLSGMIP 213 (580)
Q Consensus 181 ~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p 213 (580)
+|++++..+..+..+++|+.|+|++|.+.+..|
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 888885444456788899999999998886544
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=1.7e-16 Score=147.09 Aligned_cols=152 Identities=14% Similarity=0.132 Sum_probs=122.6
Q ss_pred ceEEecccCCCCCCCCCc------hhhcCcccCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCC
Q 008026 18 QSLWVNGQNGNAKLGGGI------DVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESL 91 (580)
Q Consensus 18 ~~L~~~~~~~n~~~~~~~------~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L 91 (580)
..+..+++..+.+....| ..|.++++|++|+|++|.|++ +|.+..+++|+.|+|++|+++ .+|..+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344445555554544444 489999999999999999998 558888999999999999999 899999999999
Q ss_pred cEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccC
Q 008026 92 KIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTK 171 (580)
Q Consensus 92 ~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (580)
+.|+|++|++++++ .+..+.+|+.|++++|.+..++. +. .+..+
T Consensus 96 ~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~--------~~---------------------------~l~~l 139 (198)
T 1ds9_A 96 EELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGE--------ID---------------------------KLAAL 139 (198)
T ss_dssp SEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHH--------HH---------------------------HHTTT
T ss_pred CEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhH--------HH---------------------------HHhcC
Confidence 99999999999864 68889999999999998865431 00 12234
Q ss_pred CcEEEEEecCCcccccCccc----------ccCCCCCcEEeccCCccc
Q 008026 172 GNITVINFQKMNLTGTISPE----------FASFKSLQRLILADNNLS 209 (580)
Q Consensus 172 ~~L~~L~ls~n~l~~~~p~~----------~~~l~~L~~L~ls~N~l~ 209 (580)
++|+.|++++|.+.+.+|.. +..+++|+.|| +|.++
T Consensus 140 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 140 DKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp TTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 58999999999999877753 88999999997 67665
No 386
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.5e-13 Score=123.67 Aligned_cols=62 Identities=23% Similarity=0.259 Sum_probs=31.7
Q ss_pred EEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccccc
Q 008026 174 ITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 235 (580)
Q Consensus 174 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ 235 (580)
|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+++|++|+|++|+++..
T Consensus 56 L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 56 LTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 33333334444422223345555666666666666533333456666666666666665543
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=3.6e-13 Score=121.22 Aligned_cols=107 Identities=20% Similarity=0.206 Sum_probs=84.1
Q ss_pred cCceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCC-CcccccccccccC
Q 008026 43 SLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF-DRSVSLDMAKGSN 121 (580)
Q Consensus 43 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~L~~l~l~~ 121 (580)
+.++|++++|+++..+..+ .++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+++++.. ..+
T Consensus 10 ~~~~l~~s~n~l~~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l---------- 77 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKL---------- 77 (170)
T ss_dssp ETTEEECTTSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTC----------
T ss_pred CCCEEEeCCCCcCccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCC----------
Confidence 4578899999988755455 378889999999998666777889999999999999888877642 222
Q ss_pred CCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEE
Q 008026 122 NFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRL 201 (580)
Q Consensus 122 n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L 201 (580)
++|+.|+|++|+|++..|..|..+++|+.|
T Consensus 78 --------------------------------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 107 (170)
T 3g39_A 78 --------------------------------------------------TQLTQLSLNDNQLKSIPRGAFDNLKSLTHI 107 (170)
T ss_dssp --------------------------------------------------TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred --------------------------------------------------CCCCEEECCCCccCEeCHHHhcCCCCCCEE
Confidence 378888888888886555568899999999
Q ss_pred eccCCccccc
Q 008026 202 ILADNNLSGM 211 (580)
Q Consensus 202 ~ls~N~l~g~ 211 (580)
+|++|.+...
T Consensus 108 ~L~~N~~~c~ 117 (170)
T 3g39_A 108 WLLNNPWDCA 117 (170)
T ss_dssp ECCSSCBCTT
T ss_pred EeCCCCCCCC
Confidence 9999988743
No 388
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=3.7e-13 Score=121.62 Aligned_cols=59 Identities=15% Similarity=0.117 Sum_probs=29.2
Q ss_pred ceEecccCcCcCCCCCCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccC
Q 008026 45 KEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPV 105 (580)
Q Consensus 45 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~ 105 (580)
+.+++++|+++..++.+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++++
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~ 73 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIP 73 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccC
Confidence 445555555543333332 45555555555555433444555555555555555554443
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=3.4e-13 Score=121.84 Aligned_cols=107 Identities=21% Similarity=0.261 Sum_probs=81.5
Q ss_pred CcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhh
Q 008026 67 LESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLM 145 (580)
Q Consensus 67 L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~ 145 (580)
-+.+++++|++. .+|..+. ++|+.|+|++|+|++++|. |..+
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l---------------------------------- 56 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHL---------------------------------- 56 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTC----------------------------------
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCC----------------------------------
Confidence 378999999997 8998774 8899999999999988774 3332
Q ss_pred CCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEE
Q 008026 146 GYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKEL 225 (580)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l 225 (580)
++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+..+++|++|
T Consensus 57 --------------------------~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 110 (174)
T 2r9u_A 57 --------------------------VNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHI 110 (174)
T ss_dssp --------------------------TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred --------------------------cCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEE
Confidence 267777888888885444446788888888888888884444458888888888
Q ss_pred EccCCcccccC
Q 008026 226 DVSNNQLYGKI 236 (580)
Q Consensus 226 ~ls~N~l~g~~ 236 (580)
+|++|++....
T Consensus 111 ~L~~N~~~c~~ 121 (174)
T 2r9u_A 111 YLYNNPWDCEC 121 (174)
T ss_dssp ECCSSCBCTTB
T ss_pred EeCCCCccccc
Confidence 88888887543
No 390
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.36 E-value=3.3e-12 Score=123.71 Aligned_cols=147 Identities=14% Similarity=0.068 Sum_probs=113.9
Q ss_pred HHhhcCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEEcCCeeE
Q 008026 391 RNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKL 469 (580)
Q Consensus 391 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 469 (580)
......|++...++.|+.+.||++... +..+++|+...... .....+.+|+++++.+. +..++++++++...+..|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 445567888888999999999999754 68899999865321 12246889999999985 677889999999888999
Q ss_pred EEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCC-------------------------------
Q 008026 470 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA------------------------------- 518 (580)
Q Consensus 470 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~------------------------------- 518 (580)
+||||++|.+|.+.+. +......++.+++.+|..||+..
T Consensus 87 lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred EEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 9999999999876431 11223467889999999999721
Q ss_pred -------------------------CCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 519 -------------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 519 -------------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
...++|+|++|.||+++++..+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13489999999999998765567999998754
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.30 E-value=1.7e-12 Score=130.12 Aligned_cols=56 Identities=27% Similarity=0.300 Sum_probs=26.5
Q ss_pred cEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCC-EEEccC
Q 008026 173 NITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALK-ELDVSN 229 (580)
Q Consensus 173 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~-~l~ls~ 229 (580)
+|+.|+|++|+++..-+..|.+|++|++|+|.+| +...-+.+|.++++|+ .+++.+
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc
Confidence 4555555555555333334455555555555554 4322233445555555 555544
No 392
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=4.5e-12 Score=128.14 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=89.5
Q ss_pred ccCCCCCCCCCchhhcCcccCceEeccc-CcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcc
Q 008026 24 GQNGNAKLGGGIDVIQNMTSLKEIWLHS-NAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLL 101 (580)
Q Consensus 24 ~~~~n~~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l 101 (580)
++++++.++.+|. |..+++|++|+|++ |.|++.+| .|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|
T Consensus 14 ~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 92 (347)
T 2ifg_A 14 RCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (347)
T ss_dssp ECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred EcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCcc
Confidence 5666634566888 99999999999996 99999887 599999999999999999987788899999999999999999
Q ss_pred cccCCCCCcccccccccccCCCCCC
Q 008026 102 QGPVPEFDRSVSLDMAKGSNNFCLP 126 (580)
Q Consensus 102 ~~~~~~~~~~~~L~~l~l~~n~~~~ 126 (580)
+++++.+.....|+.|++.+|.+.-
T Consensus 93 ~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 93 ESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred ceeCHHHcccCCceEEEeeCCCccC
Confidence 9999986665569999999998754
No 393
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=8e-12 Score=126.27 Aligned_cols=60 Identities=27% Similarity=0.236 Sum_probs=35.1
Q ss_pred cEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccc
Q 008026 173 NITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 173 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~ 233 (580)
+|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+..++ |+.|+|++|+|.
T Consensus 57 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 57 ELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 455555555555555555666666677777777776632233333333 777777777665
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.25 E-value=6.9e-12 Score=125.74 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=35.4
Q ss_pred cEEEEEecCCcccccCcccccCCCCCc-EEeccCCcccccCCccCcCCCCCCEEEccCCcccccCC
Q 008026 173 NITVINFQKMNLTGTISPEFASFKSLQ-RLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 237 (580)
Q Consensus 173 ~L~~L~ls~n~l~~~~p~~~~~l~~L~-~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~~p 237 (580)
+|+.|+|++| +...-+..|.+|++|+ .|++.+ ++...-+.+|.++++|+.|++++|+++..-+
T Consensus 251 ~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~ 314 (329)
T 3sb4_A 251 YLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGD 314 (329)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECT
T ss_pred CCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccch
Confidence 5666666665 5434444566666666 666665 4542334556666666666666666654333
No 395
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.25 E-value=8.1e-12 Score=120.67 Aligned_cols=139 Identities=19% Similarity=0.157 Sum_probs=100.4
Q ss_pred cCCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCc--ccceeeEEEcCCeeEEEE
Q 008026 395 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 395 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~ 472 (580)
..|.+....+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++...++..++||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 345554444466679999998777888999987543 2245788999999886444 556888888877889999
Q ss_pred EecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 008026 473 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA---------------------------------- 518 (580)
Q Consensus 473 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~---------------------------------- 518 (580)
||++|.++. .. ..+ ...++.+++..|..||+..
T Consensus 95 e~i~G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 95 GEVPGQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp ECCSSEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EecCCcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 999998884 20 111 1245667777777777521
Q ss_pred ---------------------CCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 519 ---------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 519 ---------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
...++|+|++|.||++++++.+.|+||+.+...
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 112999999999999987766679999997653
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=3e-13 Score=137.57 Aligned_cols=162 Identities=15% Similarity=0.148 Sum_probs=110.0
Q ss_pred cccCceEecccCcCcCCCC-C----CC-CCCCCcEEeccCCcccccCCcc-ccCCCCCcEEEccCCcccccCCC-C----
Q 008026 41 MTSLKEIWLHSNAFSGPLP-D----FS-GVKQLESLSLRDNFFTGPVPDS-LVKLESLKIVNMTNNLLQGPVPE-F---- 108 (580)
Q Consensus 41 l~~L~~L~L~~N~l~~~~p-~----~~-~l~~L~~L~L~~N~l~~~~P~~-~~~l~~L~~L~L~~N~l~~~~~~-~---- 108 (580)
++.|++|+|++|.|+.... . +. ..++|+.|+|++|+|+..-... ...+++|+.|+|++|.++..... +
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4678888898888875332 1 22 2368888999988886433333 33467888899999888654332 2
Q ss_pred -CcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCccccc
Q 008026 109 -DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT 187 (580)
Q Consensus 109 -~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~ 187 (580)
....+|+.|++++|.+... ....+.. .+...++|+.|+|++|.|...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~------~~~~l~~--------------------------~L~~~~~L~~L~Ls~N~l~~~ 198 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAA------GVAVLME--------------------------GLAGNTSVTHLSLLHTGLGDE 198 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHH------HHHHHHH--------------------------HHHTCSSCCEEECTTSSCHHH
T ss_pred HhcCCccceeeCCCCCCChH------HHHHHHH--------------------------HHhcCCCcCEEeCCCCCCCcH
Confidence 2346788888888875421 1111111 011224799999999999853
Q ss_pred ----CcccccCCCCCcEEeccCCcccc----cCCccCcCCCCCCEEEccCCcccc
Q 008026 188 ----ISPEFASFKSLQRLILADNNLSG----MIPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 188 ----~p~~~~~l~~L~~L~ls~N~l~g----~~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
++..+..+++|+.|+|++|.|+. .++..+...+.|++|||++|++++
T Consensus 199 g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 199 GLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 46667788899999999999974 234455667899999999999874
No 397
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.16 E-value=3.9e-13 Score=146.22 Aligned_cols=201 Identities=12% Similarity=0.055 Sum_probs=114.7
Q ss_pred ccceEEecccCCCCCCCCCchhhcCc--ccCceEecccCc-CcC-CCCC-CCCCCCCcEEeccCCccccc----CCcccc
Q 008026 16 QIQSLWVNGQNGNAKLGGGIDVIQNM--TSLKEIWLHSNA-FSG-PLPD-FSGVKQLESLSLRDNFFTGP----VPDSLV 86 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~~~~~~~~l--~~L~~L~L~~N~-l~~-~~p~-~~~l~~L~~L~L~~N~l~~~----~P~~~~ 86 (580)
++..|+.+++++|.+....+..+..+ .+|++|+|++|. ++. .++. ...+++|+.|+|++|.+.+. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45566666666665555445556553 348888888776 221 1112 23577888888888887654 344466
Q ss_pred CCCCCcEEEccCCcccccCC-----CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccC-CCCC
Q 008026 87 KLESLKIVNMTNNLLQGPVP-----EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWK-GNDP 160 (580)
Q Consensus 87 ~l~~L~~L~L~~N~l~~~~~-----~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~ 160 (580)
.+++|+.|+|++|.+++... .+..+.+|+.|++++|.+..++ . .......+..+..... ....
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~--------~---~~~~~~~L~~L~l~~~~~~~~ 258 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV--------G---FFKAAANLEEFCGGSLNEDIG 258 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH--------H---HHHHCTTCCEEEECBCCCCTT
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH--------H---HHhhhhHHHhhcccccccccc
Confidence 77888888888888763322 2346677888888877654322 0 0011111111111100 1101
Q ss_pred CCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCC-ccCcCCCCCCEEEcc
Q 008026 161 CSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIP-EGLSVLGALKELDVS 228 (580)
Q Consensus 161 ~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~l~~l~~L~~l~ls 228 (580)
.......+..+.+|+.|+++++... .+|..+..+++|++|+|++|.+.+... ..+..+++|+.|+++
T Consensus 259 ~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 259 MPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp CTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred hHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 1122233344457777777775433 667777777777777777777654333 335667777777777
No 398
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.06 E-value=3.9e-10 Score=114.36 Aligned_cols=143 Identities=15% Similarity=0.226 Sum_probs=105.5
Q ss_pred ccceeeccCcEEEEEEEEcCCcEEEEEEee--ccccChhhHHHHHHHHHHHHhcC--CCcccceeeEEEcC---CeeEEE
Q 008026 399 EENILGRGGFGTVYKGELHDGTKIAVKRME--AGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDG---NEKLLV 471 (580)
Q Consensus 399 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv 471 (580)
..+.++.|.++.||+.... +..+++|+.. .... ......+.+|+++++.+. +..+++++.++.+. +..|+|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4577899999999999775 4678888765 3221 122356888999999997 44578888888766 457999
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA--------------------------------- 518 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~--------------------------------- 518 (580)
|||++|..+.+.. ...++..+...++.+++.+|..||+..
T Consensus 120 me~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 120 MEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999998774321 124567778889999999999999731
Q ss_pred ----------------------CCCcEecCCCCCCeEecCCCc--EEEEeeccccc
Q 008026 519 ----------------------HQSFIHRDLKPSNILLGDDMR--AKVADFGLVRL 550 (580)
Q Consensus 519 ----------------------~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 550 (580)
...++|||++|.||+++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256899999999999987653 68999998864
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.04 E-value=5.3e-12 Score=137.20 Aligned_cols=106 Identities=10% Similarity=-0.103 Sum_probs=75.7
Q ss_pred ccceEEecccCCCCCCCC----CchhhcCcccCceEecccCcCcCCC----CC-CCCCCCCcEEeccCCcccccCCcccc
Q 008026 16 QIQSLWVNGQNGNAKLGG----GIDVIQNMTSLKEIWLHSNAFSGPL----PD-FSGVKQLESLSLRDNFFTGPVPDSLV 86 (580)
Q Consensus 16 ~l~~L~~~~~~~n~~~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----p~-~~~l~~L~~L~L~~N~l~~~~P~~~~ 86 (580)
+++.|+.+++++|.+... ++..+.++++|++|+|++|.+++.. +. +.++++|+.|+|++|.+. .+|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHh
Confidence 456777777877866554 3345678899999999999998433 22 456899999999999998 5888899
Q ss_pred CCCCCcEEEccCCccc----ccCCCCCcccccccccccCC
Q 008026 87 KLESLKIVNMTNNLLQ----GPVPEFDRSVSLDMAKGSNN 122 (580)
Q Consensus 87 ~l~~L~~L~L~~N~l~----~~~~~~~~~~~L~~l~l~~n 122 (580)
++++|+.|+++.+... .....+..+.+|+.+.++++
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 280 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM 280 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC
T ss_pred hhhHHHhhcccccccccchHHHHHHhhccccccccCcccc
Confidence 9999999999863322 11123555666666666554
No 400
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.93 E-value=2e-11 Score=132.63 Aligned_cols=212 Identities=16% Similarity=0.062 Sum_probs=103.9
Q ss_pred cceEEecccCCCCCCCCCchhhc-CcccCceEecccC-cCcCC-CCCC-CCCCCCcEEeccCCcccccCCcccc----CC
Q 008026 17 IQSLWVNGQNGNAKLGGGIDVIQ-NMTSLKEIWLHSN-AFSGP-LPDF-SGVKQLESLSLRDNFFTGPVPDSLV----KL 88 (580)
Q Consensus 17 l~~L~~~~~~~n~~~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~-~~l~~L~~L~L~~N~l~~~~P~~~~----~l 88 (580)
+..|+.+++++|.+....+..+. .+++|++|+|++| .++.. ++.+ ..+++|+.|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 34455555555655544445554 5778888888877 44432 3333 3577888888888877654444333 55
Q ss_pred CCCcEEEccCCc--ccc-cCCC-CCcccccccccccCCCC-CC-------------CCCC-C--chhHHHHHHHHHhhCC
Q 008026 89 ESLKIVNMTNNL--LQG-PVPE-FDRSVSLDMAKGSNNFC-LP-------------SPGA-C--DPRLNALLSVVKLMGY 147 (580)
Q Consensus 89 ~~L~~L~L~~N~--l~~-~~~~-~~~~~~L~~l~l~~n~~-~~-------------~~~~-~--~~~l~~l~~~~~~~~~ 147 (580)
++|+.|+|++|. +.. .++. +..+.+|+.|++++|.. .. +.-. . ......+..+...+..
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 678888887776 110 0111 23346677777776621 00 0000 0 0000111111111111
Q ss_pred ccccccc-cCCCCCCCCccceeccCCcEEEEEecCCcccccCc-ccccCCCCCcEEeccCCcccc-cCCccCcCCCCCCE
Q 008026 148 PQRFAEN-WKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTIS-PEFASFKSLQRLILADNNLSG-MIPEGLSVLGALKE 224 (580)
Q Consensus 148 ~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p-~~~~~l~~L~~L~ls~N~l~g-~~p~~l~~l~~L~~ 224 (580)
...+... .........++.....+++|+.|+|++|.+++... ..+..+++|+.|++++| +.. .++.....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 1111111 00111111122222234577777777777664322 23556777777777777 331 12222234677777
Q ss_pred EEccC
Q 008026 225 LDVSN 229 (580)
Q Consensus 225 l~ls~ 229 (580)
|++++
T Consensus 343 L~L~~ 347 (594)
T 2p1m_B 343 LRVFP 347 (594)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 77744
No 401
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.91 E-value=9.2e-12 Score=135.34 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=28.5
Q ss_pred CcEEEEEecCCcccccCcccccC-CCCCcEEeccCCcccccCCccC-cCCCCCCEEEccCCccc
Q 008026 172 GNITVINFQKMNLTGTISPEFAS-FKSLQRLILADNNLSGMIPEGL-SVLGALKELDVSNNQLY 233 (580)
Q Consensus 172 ~~L~~L~ls~n~l~~~~p~~~~~-l~~L~~L~ls~N~l~g~~p~~l-~~l~~L~~l~ls~N~l~ 233 (580)
++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|+++
T Consensus 432 ~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 432 KDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp TTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred CCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 3455555544 444333333433 4555555555555543333222 33455555555555553
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.89 E-value=1.4e-11 Score=125.26 Aligned_cols=185 Identities=16% Similarity=0.056 Sum_probs=121.5
Q ss_pred cceEEecccCCCCCCCCCchhhcCc-----ccCceEecccCcCcCCCC-CC-CCCCCCcEEeccCCcccccCCccc----
Q 008026 17 IQSLWVNGQNGNAKLGGGIDVIQNM-----TSLKEIWLHSNAFSGPLP-DF-SGVKQLESLSLRDNFFTGPVPDSL---- 85 (580)
Q Consensus 17 l~~L~~~~~~~n~~~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p-~~-~~l~~L~~L~L~~N~l~~~~P~~~---- 85 (580)
+..|+.+++++|.+.......|..+ ++|++|+|++|.|+.... .+ ..+++|+.|+|++|+|+..-...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3456677777777655444444443 799999999999875332 33 346789999999999974433334
Q ss_pred -cCCCCCcEEEccCCcccccCC-----CCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCC
Q 008026 86 -VKLESLKIVNMTNNLLQGPVP-----EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGND 159 (580)
Q Consensus 86 -~~l~~L~~L~L~~N~l~~~~~-----~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 159 (580)
...++|+.|+|++|.|+.... .+..+.+|+.|++++|.+... ....+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~------g~~~L~~------------------- 205 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDE------GLELLAA------------------- 205 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHH------HHHHHHH-------------------
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcH------HHHHHHH-------------------
Confidence 346889999999999975322 245677899999999986421 1111111
Q ss_pred CCCCccceeccCCcEEEEEecCCcccc----cCcccccCCCCCcEEeccCCcccccCCccCcCCCC-----CCEEE--cc
Q 008026 160 PCSDWIGVTCTKGNITVINFQKMNLTG----TISPEFASFKSLQRLILADNNLSGMIPEGLSVLGA-----LKELD--VS 228 (580)
Q Consensus 160 ~~~~~~~~~~~~~~L~~L~ls~n~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~-----L~~l~--ls 228 (580)
.+...++|+.|+|++|.|+. .++..+...++|++|+|++|.|+..-...+..+.. |+.+. +.
T Consensus 206 -------~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~ 278 (372)
T 3un9_A 206 -------QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTE 278 (372)
T ss_dssp -------HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC-
T ss_pred -------HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhc
Confidence 11122489999999999985 35556667899999999999997544444433321 55555 54
Q ss_pred CCccc
Q 008026 229 NNQLY 233 (580)
Q Consensus 229 ~N~l~ 233 (580)
.|.++
T Consensus 279 ~~~~~ 283 (372)
T 3un9_A 279 GTAVS 283 (372)
T ss_dssp ---CH
T ss_pred CCccC
Confidence 55444
No 403
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.87 E-value=9.1e-09 Score=105.49 Aligned_cols=195 Identities=14% Similarity=0.073 Sum_probs=121.3
Q ss_pred CccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCC
Q 008026 11 SFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLE 89 (580)
Q Consensus 11 ~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~ 89 (580)
.|.+.+|+.+. +..+ +......+|.++ +|+.+.|.+ .++.+.+ .|.++++|+.++|++|++. .+|.......
T Consensus 131 aF~~~~L~~i~---l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~ 203 (401)
T 4fdw_A 131 AFRNSQIAKVV---LNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYA 203 (401)
T ss_dssp TTTTCCCSEEE---CCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTC
T ss_pred hcccCCccEEE---eCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeec
Confidence 35333344444 4333 555556778884 799999986 6665555 5889999999999999998 7777644478
Q ss_pred CCcEEEccCCcccccCCC-CCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCc-cce
Q 008026 90 SLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW-IGV 167 (580)
Q Consensus 90 ~L~~L~L~~N~l~~~~~~-~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 167 (580)
+|+.+.|.+| ++.+... |.++.+|+.+.+.+| +..++...|.. ..|..+ .+.+. ...+ ...
T Consensus 204 ~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i-------------~lp~~-i~~I~~~a 266 (401)
T 4fdw_A 204 GIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTV-------------KLPNG-VTNIASRA 266 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEE-------------EEETT-CCEECTTT
T ss_pred ccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEE-------------EeCCC-ccEEChhH
Confidence 9999999855 6665553 888889999988775 56666665543 111100 00000 0011 122
Q ss_pred eccCCcEEEEEecCCccc-----ccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCC
Q 008026 168 TCTKGNITVINFQKMNLT-----GTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 230 (580)
Q Consensus 168 ~~~~~~L~~L~ls~n~l~-----~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N 230 (580)
+..+.+|+.+++.+|.+. ..-+..|.+|++|+.++|.+ .+...-..+|.++++|+.++|.+|
T Consensus 267 F~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 267 FYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp TTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT
T ss_pred hhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc
Confidence 333456777777776654 23445666777777777773 355233446666777777777544
No 404
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.86 E-value=9.6e-09 Score=105.33 Aligned_cols=204 Identities=13% Similarity=0.063 Sum_probs=134.6
Q ss_pred CccccccceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCCC-CCCCCCCcEEeccCCcccccCCc-cccCC
Q 008026 11 SFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPD-SLVKL 88 (580)
Q Consensus 11 ~~~~~~l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~P~-~~~~l 88 (580)
.|.+.+|+.+.+-+ .+......+|.++++|+.++|++|+++.+... |. ..+|+.+.|..+ +. .|+. .|.++
T Consensus 153 aF~~~~L~~i~lp~----~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~ 225 (401)
T 4fdw_A 153 AFFNSTVQEIVFPS----TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKT 225 (401)
T ss_dssp TTTTCCCCEEECCT----TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTC
T ss_pred hcCCCCceEEEeCC----CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCC
Confidence 45444455554432 35555667899999999999999999876663 65 588999999754 66 4544 58899
Q ss_pred CCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCC-ccce
Q 008026 89 ESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD-WIGV 167 (580)
Q Consensus 89 ~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 167 (580)
++|+.++|.+| ++.+....+...+|+.+.+ .+.+..++...|....+|..+.. ..+.....+... ....
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l--------~~~~~~~~~~~~I~~~a 295 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTT--------YGSTFNDDPEAMIHPYC 295 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE--------ESSCCCCCTTCEECTTT
T ss_pred CCCCEEecCCC-ccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEe--------CCccccCCcccEECHHH
Confidence 99999999875 5555554333367777777 34466677666655443332210 011111011111 1223
Q ss_pred eccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCcccc
Q 008026 168 TCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 168 ~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
+..+.+|+.++|.+ .+...-...|.+|++|+.|+|.+| +...-+.+|.++ +|+.+++++|.+..
T Consensus 296 F~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 296 LEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp TTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred hhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 44456899999994 577555678999999999999766 663446688889 99999999997763
No 405
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.75 E-value=6.1e-08 Score=96.37 Aligned_cols=137 Identities=16% Similarity=0.267 Sum_probs=99.1
Q ss_pred CCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCC----CcccceeeEEEcCCeeEEE
Q 008026 396 NFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH----RHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 396 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv 471 (580)
.+...+.++.|....||+. +..+++|+... ......+.+|.++++.+.+ ..+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4556788999999999998 66788887643 2224568899999998876 224455554 567899
Q ss_pred EEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCC--------------------------------
Q 008026 472 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAH-------------------------------- 519 (580)
Q Consensus 472 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~-------------------------------- 519 (580)
|||++|.++.+... ..++..+...++.+++..+..||+...
T Consensus 106 me~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 106 MKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 99999988864321 234555666777777777777774311
Q ss_pred ----------------------------CCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 520 ----------------------------QSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 520 ----------------------------~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
..++|+|++|.||+++.+..+.|+||+.+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23499999999999998666799999988643
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.70 E-value=1.2e-08 Score=102.71 Aligned_cols=63 Identities=13% Similarity=0.186 Sum_probs=50.0
Q ss_pred CcEEEEEecCCcccccCccccc---CCCCCcEEeccCCccccc----CCccCcCCCCCCEEEccCCcccc
Q 008026 172 GNITVINFQKMNLTGTISPEFA---SFKSLQRLILADNNLSGM----IPEGLSVLGALKELDVSNNQLYG 234 (580)
Q Consensus 172 ~~L~~L~ls~n~l~~~~p~~~~---~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~ls~N~l~g 234 (580)
++|+.|+|++|.+....+..+. .+++|+.|+|+.|.|.+. ++..+..+++|+.|+|++|.++.
T Consensus 252 p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 252 PNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 4899999999998865544443 588999999999998753 45556678999999999998874
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.67 E-value=7.2e-08 Score=95.11 Aligned_cols=137 Identities=19% Similarity=0.273 Sum_probs=97.2
Q ss_pred cceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCc--ccceeeEEEcCC---eeEEEEE
Q 008026 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRH--LVALLGHCLDGN---EKLLVFE 473 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e 473 (580)
.+.++.|....||++. ..+++|+... ......+.+|.++++.+. +.. +.+++....... ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999863 5688887543 234567899999999884 433 344554443333 3489999
Q ss_pred ecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 008026 474 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA----------------------------------- 518 (580)
Q Consensus 474 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~----------------------------------- 518 (580)
+++|.++.+... ..++..+...++.+++..+..||+..
T Consensus 97 ~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 97 KIKGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CCCCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred ccCCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999988865331 13556666777778888888877511
Q ss_pred --------------------CCCcEecCCCCCCeEecC--CCcEEEEeecccccc
Q 008026 519 --------------------HQSFIHRDLKPSNILLGD--DMRAKVADFGLVRLA 551 (580)
Q Consensus 519 --------------------~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~ 551 (580)
...++|+|++|.||++++ ...+.|+||+.+...
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 135799999999999987 456789999988653
No 408
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.58 E-value=4.2e-07 Score=87.86 Aligned_cols=136 Identities=16% Similarity=0.154 Sum_probs=96.1
Q ss_pred eeeccCcE-EEEEEEEc-CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEEcCCeeEEEEEecCCC
Q 008026 402 ILGRGGFG-TVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQG 478 (580)
Q Consensus 402 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g 478 (580)
.+..|..+ .||+.... ++..+++|+-.. .....+.+|...++.+. +--+.++++++.+.+..|+|||+++|.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45556554 68987655 466789997653 23457888999999885 334678889999899999999999998
Q ss_pred ChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 008026 479 TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA---------------------------------------- 518 (580)
Q Consensus 479 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~---------------------------------------- 518 (580)
++.+.... .......++.+++..|..||+..
T Consensus 106 ~~~~~~~~---------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 106 TAFQVLEE---------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp EHHHHHHH---------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred cccccccC---------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 87665421 11122345566666666666410
Q ss_pred ---------------CCCcEecCCCCCCeEecCCCcEEEEeecccccc
Q 008026 519 ---------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 519 ---------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
...++|+|+.+.|||+++++.+-|+||+.+...
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 112799999999999998776779999988643
No 409
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.57 E-value=3.8e-07 Score=88.89 Aligned_cols=77 Identities=19% Similarity=0.200 Sum_probs=60.3
Q ss_pred cccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCC---cccceeeEEEcCCeeEEEEEe
Q 008026 398 SEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR---HLVALLGHCLDGNEKLLVFEY 474 (580)
Q Consensus 398 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~ 474 (580)
...+.++.|.++.||+++..+|+.+++|+..... ......+..|++.++.+++. .+++++++. ..++||||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~ 91 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence 3467899999999999988889999999865321 12235789999999999865 577777763 36899999
Q ss_pred cCCCCh
Q 008026 475 MPQGTL 480 (580)
Q Consensus 475 ~~~g~L 480 (580)
++++.+
T Consensus 92 l~g~~~ 97 (288)
T 3d1u_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred cccCCC
Confidence 999875
No 410
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.53 E-value=9.8e-07 Score=86.98 Aligned_cols=137 Identities=17% Similarity=0.175 Sum_probs=91.5
Q ss_pred cceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCC---cccceeeEEE-cCCeeEEEEEec
Q 008026 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR---HLVALLGHCL-DGNEKLLVFEYM 475 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~ 475 (580)
.+.++.|....||+. +..+++|+-.. ......+.+|.++++.+.+. .+.+++.+.. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456888998999987 56788887422 23456789999999999742 3566777664 445678999999
Q ss_pred CCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 008026 476 PQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL-------------------------------------- 517 (580)
Q Consensus 476 ~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~-------------------------------------- 517 (580)
+|..+.+... ..++..+...++.+++..|..||+.
T Consensus 96 ~G~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 96 QGQILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CSEECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred CCeECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9988765311 1122233333334444444444421
Q ss_pred -------------------CCCCcEecCCCCCCeEecC---CCcE-EEEeecccccc
Q 008026 518 -------------------AHQSFIHRDLKPSNILLGD---DMRA-KVADFGLVRLA 551 (580)
Q Consensus 518 -------------------~~~~ivH~Dlkp~NIll~~---~~~~-kl~Dfg~a~~~ 551 (580)
....++|+|++|.||+++. ++.+ .|+||+.+...
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1245799999999999987 4554 89999987653
No 411
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.44 E-value=1.9e-06 Score=86.91 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=58.0
Q ss_pred CcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCc--ccceeeEEEcC-CeeEEEEE
Q 008026 397 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALLGHCLDG-NEKLLVFE 473 (580)
Q Consensus 397 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e 473 (580)
....+.++.|....+|+... ++..+++|..... ..+.+|..+++.+.... +.++++++... +..|+|||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 34467789999999999875 4788999976431 25888999999987544 45677776654 56899999
Q ss_pred ecCCCChh
Q 008026 474 YMPQGTLS 481 (580)
Q Consensus 474 ~~~~g~L~ 481 (580)
|++|.++.
T Consensus 115 ~l~G~~l~ 122 (362)
T 3ovc_A 115 RAQGVTLQ 122 (362)
T ss_dssp CCCSEETT
T ss_pred ecCCCCcc
Confidence 99986653
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=2.1e-08 Score=95.89 Aligned_cols=52 Identities=25% Similarity=0.355 Sum_probs=30.2
Q ss_pred cEEEEEecCCcccccCcccccCCC--CCcEEeccCCcccccCCc-------cCcCCCCCCEEE
Q 008026 173 NITVINFQKMNLTGTISPEFASFK--SLQRLILADNNLSGMIPE-------GLSVLGALKELD 226 (580)
Q Consensus 173 ~L~~L~ls~n~l~~~~p~~~~~l~--~L~~L~ls~N~l~g~~p~-------~l~~l~~L~~l~ 226 (580)
+|+.|+|++|+|.+. .++..++ +|++|+|++|.+.+.+|+ .+..+++|+.||
T Consensus 197 ~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 197 NLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 556666666666632 2333333 677777777777665552 255667777665
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.31 E-value=2.4e-07 Score=84.02 Aligned_cols=61 Identities=18% Similarity=0.173 Sum_probs=30.5
Q ss_pred cEEEEEecCCccccc----CcccccCCCCCcEEec--cCCccccc----CCccCcCCCCCCEEEccCCccc
Q 008026 173 NITVINFQKMNLTGT----ISPEFASFKSLQRLIL--ADNNLSGM----IPEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 173 ~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~l--s~N~l~g~----~p~~l~~l~~L~~l~ls~N~l~ 233 (580)
+|+.|+|++|.|... +...+...++|++|+| ++|.|... +...+...+.|++|+|++|.+.
T Consensus 94 ~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 94 TLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 344455555554422 3334445555666666 55555422 2233344456666666666554
No 414
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.24 E-value=1.8e-06 Score=87.03 Aligned_cols=82 Identities=10% Similarity=-0.013 Sum_probs=55.3
Q ss_pred ccee-eccCcEEEEEEEEc-------CCcEEEEEEeecccc-ChhhHHHHHHHHHHHHhcC-C--CcccceeeEEEcC--
Q 008026 400 ENIL-GRGGFGTVYKGELH-------DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVR-H--RHLVALLGHCLDG-- 465 (580)
Q Consensus 400 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~-- 465 (580)
.+.| +.|....+|+.... ++..+++|....... .......+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 78888999998654 267889987654220 0001245678888888885 3 2466788777654
Q ss_pred -CeeEEEEEecCCCChh
Q 008026 466 -NEKLLVFEYMPQGTLS 481 (580)
Q Consensus 466 -~~~~lv~e~~~~g~L~ 481 (580)
+..|+||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.20 E-value=1.8e-07 Score=84.89 Aligned_cols=68 Identities=18% Similarity=0.251 Sum_probs=50.0
Q ss_pred hhhcCcccCceEecccC-cCcCCC-----CCCCCCCCCcEEeccCCcccc----cCCccccCCCCCcEEEccCCcccc
Q 008026 36 DVIQNMTSLKEIWLHSN-AFSGPL-----PDFSGVKQLESLSLRDNFFTG----PVPDSLVKLESLKIVNMTNNLLQG 103 (580)
Q Consensus 36 ~~~~~l~~L~~L~L~~N-~l~~~~-----p~~~~l~~L~~L~L~~N~l~~----~~P~~~~~l~~L~~L~L~~N~l~~ 103 (580)
..+...++|++|+|++| .|...- ..+...++|++|+|++|+|.. .+...+...++|+.|+|++|.|+.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 35667888999999998 876421 125557889999999999863 244556667889999999888764
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.17 E-value=1e-06 Score=84.09 Aligned_cols=66 Identities=21% Similarity=0.234 Sum_probs=56.4
Q ss_pred CCcEEEEEecCCcccc--cCcccccCCCCCcEEeccCCcccccCCccCcCCC--CCCEEEccCCcccccCCC
Q 008026 171 KGNITVINFQKMNLTG--TISPEFASFKSLQRLILADNNLSGMIPEGLSVLG--ALKELDVSNNQLYGKIPS 238 (580)
Q Consensus 171 ~~~L~~L~ls~n~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~--~L~~l~ls~N~l~g~~p~ 238 (580)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. .++..++ +|++|+|++|++++.+|.
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCc
Confidence 3589999999999997 5667888999999999999999854 4456666 999999999999988773
No 417
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.14 E-value=3.2e-05 Score=77.23 Aligned_cols=143 Identities=16% Similarity=0.235 Sum_probs=79.8
Q ss_pred ceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCC--Ccccceee------EEEcCCeeEEEE
Q 008026 401 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH--RHLVALLG------HCLDGNEKLLVF 472 (580)
Q Consensus 401 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~------~~~~~~~~~lv~ 472 (580)
+.|+.|..+.||++...++ .+++|+.... ..++..|.++++.+.. -.+++++. +....+..+++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4566677889999977644 5899988652 1233445555555431 12333332 123456789999
Q ss_pred EecCCCChh-----------HHHHHHhh--hCC--C--------CccHHH------------------------------
Q 008026 473 EYMPQGTLS-----------RHIFNWAE--EGL--K--------PLEWNR------------------------------ 499 (580)
Q Consensus 473 e~~~~g~L~-----------~~l~~~~~--~~~--~--------~~~~~~------------------------------ 499 (580)
||++|..+. +.+.+... ... . ...|..
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 11111111 100 0 011211
Q ss_pred -HHHHHHHHHHHHHHHHh----------CCCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 500 -RLTIALDVARGVEYLHG----------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 500 -~~~i~~~i~~aL~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
...+..++..++++|+. .....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 00111223445666652 0147899999999999998778899999998754
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.98 E-value=1e-05 Score=82.79 Aligned_cols=77 Identities=13% Similarity=0.128 Sum_probs=50.2
Q ss_pred cceeeccCcEEEEEEEEc-CCcEEEEEEeecccc--C---hhhHHHHHHHHHHHHhcCC--Cc-ccceeeEEEcCCeeEE
Q 008026 400 ENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI--S---GKGLTEFKSEIAVLTKVRH--RH-LVALLGHCLDGNEKLL 470 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~---~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~~~l 470 (580)
.+.+|.|.++.||++... +++.|++|....... . .....++..|.++++.+.. +. +++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999654 468899998653211 0 1123456788888888742 33 4455543 3455689
Q ss_pred EEEecCCC
Q 008026 471 VFEYMPQG 478 (580)
Q Consensus 471 v~e~~~~g 478 (580)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 419
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.95 E-value=4.7e-06 Score=83.75 Aligned_cols=64 Identities=20% Similarity=0.262 Sum_probs=43.8
Q ss_pred CCcEEEEEecC--Ccccc-----cCcccc--cCCCCCcEEeccCCcccccCCccCc---CCCCCCEEEccCCcccc
Q 008026 171 KGNITVINFQK--MNLTG-----TISPEF--ASFKSLQRLILADNNLSGMIPEGLS---VLGALKELDVSNNQLYG 234 (580)
Q Consensus 171 ~~~L~~L~ls~--n~l~~-----~~p~~~--~~l~~L~~L~ls~N~l~g~~p~~l~---~l~~L~~l~ls~N~l~g 234 (580)
+++|+.|+|+. |...+ .+...+ ..+++|+.|+|++|.+....+..+. .+++|++|||+.|.+++
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 34788888863 22111 112223 3589999999999998754443333 57899999999999986
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.90 E-value=8.1e-05 Score=73.01 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=92.0
Q ss_pred ccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC---CCcccceeeEEEcCCeeEEEEEec
Q 008026 399 EENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR---HRHLVALLGHCLDGNEKLLVFEYM 475 (580)
Q Consensus 399 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~ 475 (580)
..+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.+. ...+++++++....+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 356789999999999876 4678889976542 3467889999888884 356888898888888899999999
Q ss_pred CCCChh--------HHHHHHhhhCC-C-------------------CccHHHHH---HHH----------------HHHH
Q 008026 476 PQGTLS--------RHIFNWAEEGL-K-------------------PLEWNRRL---TIA----------------LDVA 508 (580)
Q Consensus 476 ~~g~L~--------~~l~~~~~~~~-~-------------------~~~~~~~~---~i~----------------~~i~ 508 (580)
++..+. +.+.+...... . .-+|.... ++. .+++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 987642 22222211111 0 01343221 111 1111
Q ss_pred HHH-HHHHh-CCCCCcEecCCCCCCeEecCCCcEEEEeec
Q 008026 509 RGV-EYLHG-LAHQSFIHRDLKPSNILLGDDMRAKVADFG 546 (580)
Q Consensus 509 ~aL-~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 546 (580)
..+ ..|.. .....+||+|+.+.|++++.++ +.|+||.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 23321 1246799999999999999887 8999984
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.78 E-value=0.00011 Score=71.38 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=56.6
Q ss_pred CCcccceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCC---cccceeeEEEcCCeeEEEE
Q 008026 396 NFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR---HLVALLGHCLDGNEKLLVF 472 (580)
Q Consensus 396 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~ 472 (580)
...-.+.+|.|..+.||+.+..+|+.|++|+..... ......+..|++.|+.+.-. -+++++++. ..++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 344567899999999999999999999999865432 12234678899999988522 244555442 347999
Q ss_pred EecCCCCh
Q 008026 473 EYMPQGTL 480 (580)
Q Consensus 473 e~~~~g~L 480 (580)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987654
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.60 E-value=0.00029 Score=72.47 Aligned_cols=75 Identities=15% Similarity=0.195 Sum_probs=45.8
Q ss_pred cceeeccCcEEEEEEEEcCCcEEEEEEeeccc--cCh-----hhHHHHHHHHHHHH-hcCCCcccceeeEEEcCCeeEEE
Q 008026 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGV--ISG-----KGLTEFKSEIAVLT-KVRHRHLVALLGHCLDGNEKLLV 471 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~-----~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~lv 471 (580)
.+.+|.|....||++.. ++..++||...... ... .....+..|+..+. ......+++++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 56789999999999964 46789999533210 011 02233444443322 22234566777665 5667999
Q ss_pred EEec-CC
Q 008026 472 FEYM-PQ 477 (580)
Q Consensus 472 ~e~~-~~ 477 (580)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 423
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.58 E-value=0.00032 Score=69.29 Aligned_cols=158 Identities=13% Similarity=0.148 Sum_probs=85.2
Q ss_pred HHHHHhhcCCcc-----cceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCc--ccceee
Q 008026 388 QVLRNVTNNFSE-----ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALLG 460 (580)
Q Consensus 388 ~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~ 460 (580)
+++..+...|.+ .+.|+.|....+|+....++ .+++|...... ....+..|+.++..+.... +.+++.
T Consensus 10 ~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 10 DELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp HHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred HHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 344444444544 34566788889999977655 68889876521 1234566777777764212 233332
Q ss_pred E------EEcCCeeEEEEEecCCCChhH-----------HHHHHhhh--CCC-C-------ccHHHHHH-----------
Q 008026 461 H------CLDGNEKLLVFEYMPQGTLSR-----------HIFNWAEE--GLK-P-------LEWNRRLT----------- 502 (580)
Q Consensus 461 ~------~~~~~~~~lv~e~~~~g~L~~-----------~l~~~~~~--~~~-~-------~~~~~~~~----------- 502 (580)
. ....+..+++|+|++|..+.. .+.+.... ... . ..|.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 1 123456789999998865421 11111111 000 0 11221100
Q ss_pred -HHHHHHHHHHHHHhC----CCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 503 -IALDVARGVEYLHGL----AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 503 -i~~~i~~aL~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
+...+...+++++.. ....++|+|+++.||+++.+..+.++||+.+..
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234455555531 135789999999999998775568999987753
No 424
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.56 E-value=0.00023 Score=72.53 Aligned_cols=151 Identities=16% Similarity=0.118 Sum_probs=104.2
Q ss_pred hhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCCccccCCCCCcEEEccCCcccccCCCCCcccccc
Q 008026 37 VIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLD 115 (580)
Q Consensus 37 ~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~ 115 (580)
......+|+.+.+.++. +.... .|.++..|+.+.+..+... .-...|..+..|+.+.+..+.+.. ..|..+.+|+
T Consensus 225 ~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~ 300 (394)
T 4fs7_A 225 FALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCSSLT 300 (394)
T ss_dssp TTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT--TTTTTCTTCC
T ss_pred hhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc--cccccccccc
Confidence 34456788888887543 32323 4788889999999887665 455668889999988887764321 2377788888
Q ss_pred cccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCC
Q 008026 116 MAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASF 195 (580)
Q Consensus 116 ~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l 195 (580)
.+.+.++ +..+....|. ...+|+.++|.++ ++..-..+|.+|
T Consensus 301 ~i~l~~~-i~~I~~~aF~------------------------------------~c~~L~~i~lp~~-v~~I~~~aF~~c 342 (394)
T 4fs7_A 301 EVKLLDS-VKFIGEEAFE------------------------------------SCTSLVSIDLPYL-VEEIGKRSFRGC 342 (394)
T ss_dssp EEEECTT-CCEECTTTTT------------------------------------TCTTCCEECCCTT-CCEECTTTTTTC
T ss_pred ccccccc-cceechhhhc------------------------------------CCCCCCEEEeCCc-ccEEhHHhccCC
Confidence 8877654 4444444432 2237888888754 664445678899
Q ss_pred CCCcEEeccCCcccccCCccCcCCCCCCEEEccCC
Q 008026 196 KSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 230 (580)
Q Consensus 196 ~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N 230 (580)
++|+.+++..| +...-..+|.++++|+.+++..+
T Consensus 343 ~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 343 TSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 99999999877 66233557888999999988654
No 425
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.54 E-value=0.00027 Score=72.02 Aligned_cols=173 Identities=16% Similarity=0.070 Sum_probs=109.3
Q ss_pred cceEEecccCCCCCCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCc-------------------
Q 008026 17 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNF------------------- 76 (580)
Q Consensus 17 l~~L~~~~~~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~------------------- 76 (580)
+..|+.+.+..+ .......+|.++.+|+.+++..| ++.+.. .|.++..|+.+.+..+.
T Consensus 161 c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip 238 (394)
T 4fs7_A 161 CESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIP 238 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEEC
T ss_pred cCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEEC
Confidence 334444444322 44444467888888888888766 332222 35555555555544322
Q ss_pred --ccccCCccccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccc
Q 008026 77 --FTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAEN 154 (580)
Q Consensus 77 --l~~~~P~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 154 (580)
+...-...|.++.+|+.+.+..+..+-....|..+..++.+....+.+ +...+
T Consensus 239 ~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F---------------------- 293 (394)
T 4fs7_A 239 DSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTF---------------------- 293 (394)
T ss_dssp TTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTT----------------------
T ss_pred CCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccc----------------------
Confidence 121112347788999999998886654444577888887766555432 21111
Q ss_pred cCCCCCCCCccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccc
Q 008026 155 WKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~ 233 (580)
....+|+.+.+.++ +...-..+|.++.+|+.++|.++ +...-..+|.++++|+.+++..| ++
T Consensus 294 --------------~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~ 355 (394)
T 4fs7_A 294 --------------YGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR 355 (394)
T ss_dssp --------------TTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred --------------cccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc
Confidence 12247888888765 55445567899999999999765 66233568999999999999776 55
No 426
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.46 E-value=0.00055 Score=69.73 Aligned_cols=110 Identities=16% Similarity=0.177 Sum_probs=69.9
Q ss_pred cccCCCCCcEEEccCCcccccCCCCCcccccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCC
Q 008026 84 SLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD 163 (580)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (580)
.|.++++|+.+.+.++..+--.-.|.++..|+.+.+. +.+..++...|..
T Consensus 260 aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~----------------------------- 309 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAG----------------------------- 309 (394)
T ss_dssp TTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTT-----------------------------
T ss_pred eeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecC-----------------------------
Confidence 4777888888888766544333347777888877775 3344555444421
Q ss_pred ccceeccCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccC-CccCcCCCCCCEEEccCCccc
Q 008026 164 WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMI-PEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 164 ~~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~l~~l~~L~~l~ls~N~l~ 233 (580)
+.+|+.++|..+ ++..-..+|.+|++|+.+.|..+ +. .| ..+|.++++|+.+++.+|...
T Consensus 310 -------c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 310 -------CISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp -------CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHH
T ss_pred -------CCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceee
Confidence 236777777654 44344456777888888887654 55 44 346777788888887776543
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.45 E-value=0.00035 Score=68.33 Aligned_cols=72 Identities=13% Similarity=0.081 Sum_probs=45.1
Q ss_pred cceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcc-cceeeEEEcCCeeEEEEEec-CC
Q 008026 400 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL-VALLGHCLDGNEKLLVFEYM-PQ 477 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~ 477 (580)
.+.|+.|....+|++ ..+++|+...... ......+|+.+++.+....+ .+++++. .+.-++++||+ ++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~---~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE---EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc---ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCC
Confidence 678999999999998 5588887754211 11123567777777642222 4565543 33457899999 66
Q ss_pred CChh
Q 008026 478 GTLS 481 (580)
Q Consensus 478 g~L~ 481 (580)
.++.
T Consensus 93 ~~l~ 96 (301)
T 3dxq_A 93 QTMS 96 (301)
T ss_dssp EECC
T ss_pred ccCC
Confidence 5553
No 428
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.41 E-value=0.0005 Score=68.25 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=72.8
Q ss_pred ceeeccCcEE-EEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-C-CcccceeeEEEcCCeeEEEEEecCC
Q 008026 401 NILGRGGFGT-VYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-H-RHLVALLGHCLDGNEKLLVFEYMPQ 477 (580)
Q Consensus 401 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~~~~~~~~~~~~~lv~e~~~~ 477 (580)
+.++.|.... +|+....++..+++|...... ...+..|+.+++.+. + -.+.+++.+....+ +++||++++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~-----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE-----GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT-----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC-----CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 4465554444 667765446777777654321 023445667666664 2 23456666543333 789999977
Q ss_pred CChhHHHHHH------------------hhh---CCCCccHHHHH-------H-------------HHHHHHHHHHHHH-
Q 008026 478 GTLSRHIFNW------------------AEE---GLKPLEWNRRL-------T-------------IALDVARGVEYLH- 515 (580)
Q Consensus 478 g~L~~~l~~~------------------~~~---~~~~~~~~~~~-------~-------------i~~~i~~aL~~LH- 515 (580)
..+.+.+... ... ....++..... . ....+...++.+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 6665433210 000 01111111100 0 0001112222221
Q ss_pred --hCCCCCcEecCCCCCCeEecCC----CcEEEEeecccccc
Q 008026 516 --GLAHQSFIHRDLKPSNILLGDD----MRAKVADFGLVRLA 551 (580)
Q Consensus 516 --~~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~ 551 (580)
......++|||+.+.|||++.+ +.+.|+||+.+...
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1123679999999999999874 67999999988654
No 429
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.35 E-value=0.0018 Score=65.84 Aligned_cols=59 Identities=14% Similarity=0.282 Sum_probs=44.7
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCCccc
Q 008026 172 GNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY 233 (580)
Q Consensus 172 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N~l~ 233 (580)
.+|+.+.+. +.+...-...|.++.+|+.++|..+ ++..-..+|.++++|+.+.+..+ ++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~ 346 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT 346 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC
Confidence 478888886 4566344567889999999999876 65233568999999999999654 54
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.24 E-value=0.0025 Score=62.91 Aligned_cols=144 Identities=14% Similarity=0.055 Sum_probs=81.3
Q ss_pred ceeeccCcEEEEEEEEcCCcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCc--ccceeeE-----EEcCCeeEEEEE
Q 008026 401 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALLGH-----CLDGNEKLLVFE 473 (580)
Q Consensus 401 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~-----~~~~~~~~lv~e 473 (580)
+.++ |....||+....+|+.+++|....... ....+..|..+++.+.... +++++.. ....+..+++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 778899998776677899998864322 2346667888877774222 3444432 122456688999
Q ss_pred ecCCCChh-----------HHHHHHhh--hC-----CCCccHHHH----HH---------------HHHHHHHHHHHHHh
Q 008026 474 YMPQGTLS-----------RHIFNWAE--EG-----LKPLEWNRR----LT---------------IALDVARGVEYLHG 516 (580)
Q Consensus 474 ~~~~g~L~-----------~~l~~~~~--~~-----~~~~~~~~~----~~---------------i~~~i~~aL~~LH~ 516 (580)
|++|..+. +.+.+... .. ....++... .. +...+...++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99875432 11111110 00 011121110 00 01111122333322
Q ss_pred C----CCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 517 L----AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 517 ~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
. ....++|+|+++.||+++ + .+.++||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 135689999999999998 4 899999987754
No 431
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.22 E-value=0.00076 Score=69.40 Aligned_cols=73 Identities=18% Similarity=0.192 Sum_probs=49.3
Q ss_pred cceeeccCcEEEEEEEEcC--------CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCc-ccceeeEEEcCCeeEE
Q 008026 400 ENILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH-LVALLGHCLDGNEKLL 470 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~l 470 (580)
.+.|+.|-...||++...+ +..+++|+.... . ....+.+|..+++.+...+ .+++++.+.. .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--E--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--C--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--C--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4668888889999997653 478999987431 1 1144557888888885333 3567765532 38
Q ss_pred EEEecCCCCh
Q 008026 471 VFEYMPQGTL 480 (580)
Q Consensus 471 v~e~~~~g~L 480 (580)
|+||++|.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986444
No 432
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.17 E-value=0.0011 Score=66.70 Aligned_cols=144 Identities=15% Similarity=0.160 Sum_probs=83.8
Q ss_pred cceeeccCcEEEEEEEEc--------CCcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEEcCCeeEE
Q 008026 400 ENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 470 (580)
.+.+..|-...+|++... ++..|++|+.... ......+.+|.++++.+. +.-..++++++.. .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 356777888889998764 2478999985331 123456678999988885 3334567766543 29
Q ss_pred EEEecCCCChhH--------------HHHHHhhhC---CCCc--cHHHHHHHHHHHHH-------------------HHH
Q 008026 471 VFEYMPQGTLSR--------------HIFNWAEEG---LKPL--EWNRRLTIALDVAR-------------------GVE 512 (580)
Q Consensus 471 v~e~~~~g~L~~--------------~l~~~~~~~---~~~~--~~~~~~~i~~~i~~-------------------aL~ 512 (580)
||||++|..+.. .+.+..... .+.. -+.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999999865531 111111111 1111 24455555544322 233
Q ss_pred HHH----hC-CCCCcEecCCCCCCeEecCC----CcEEEEeeccccc
Q 008026 513 YLH----GL-AHQSFIHRDLKPSNILLGDD----MRAKVADFGLVRL 550 (580)
Q Consensus 513 ~LH----~~-~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~ 550 (580)
.|. .. ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 332 11 13468999999999999876 7899999998753
No 433
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.17 E-value=0.0027 Score=65.70 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=47.9
Q ss_pred cceeeccCcEEEEEEEEcC-CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCcc-cceeeEEEcCCeeEEEEEecCC
Q 008026 400 ENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL-VALLGHCLDGNEKLLVFEYMPQ 477 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~ 477 (580)
.+.|+.|-...+|++...+ +..+++|+..... . ......+|..+++.+...++ +++++++. + .+||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~--~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-D--EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-C--SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-h--hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4568888889999998764 4788899874321 1 11122578899998874444 56777662 2 259999987
Q ss_pred CCh
Q 008026 478 GTL 480 (580)
Q Consensus 478 g~L 480 (580)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 554
No 434
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.05 E-value=0.0025 Score=64.32 Aligned_cols=55 Identities=16% Similarity=0.177 Sum_probs=32.9
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcccccC-CccCcCCCCCCEEEcc
Q 008026 172 GNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMI-PEGLSVLGALKELDVS 228 (580)
Q Consensus 172 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~l~~l~~L~~l~ls 228 (580)
.+|+.+++.++.+...-...|.+|.+|+.+.|..+ +. .| ..+|.++++|+.+.+.
T Consensus 286 ~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 286 SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred cccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 36666666666666444455666777777776544 44 33 3456666666666553
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.001 Score=55.84 Aligned_cols=55 Identities=18% Similarity=0.203 Sum_probs=41.9
Q ss_pred ceEecccCcCc--CCCCCCCCCCCCcEEeccCCcccccCCcc-ccCCCCCcEEEccCCccc
Q 008026 45 KEIWLHSNAFS--GPLPDFSGVKQLESLSLRDNFFTGPVPDS-LVKLESLKIVNMTNNLLQ 102 (580)
Q Consensus 45 ~~L~L~~N~l~--~~~p~~~~l~~L~~L~L~~N~l~~~~P~~-~~~l~~L~~L~L~~N~l~ 102 (580)
..++.+++.++ ..+..+ -++|+.|+|++|+|+ .+|.. |..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 47888888887 444333 246889999999998 67665 788999999999988653
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.93 E-value=0.00013 Score=64.58 Aligned_cols=80 Identities=11% Similarity=0.123 Sum_probs=41.8
Q ss_pred cCceEecccCcCcCC-CCCCCCCCCCcEEeccCCc-ccccCCccccCC----CCCcEEEccCC-ccccc-CCCCCccccc
Q 008026 43 SLKEIWLHSNAFSGP-LPDFSGVKQLESLSLRDNF-FTGPVPDSLVKL----ESLKIVNMTNN-LLQGP-VPEFDRSVSL 114 (580)
Q Consensus 43 ~L~~L~L~~N~l~~~-~p~~~~l~~L~~L~L~~N~-l~~~~P~~~~~l----~~L~~L~L~~N-~l~~~-~~~~~~~~~L 114 (580)
.|+.|||+++.|+.. +..+.++++|+.|+|++|. ++..-=..+..+ ++|+.|+|+++ +++.. +..+..+.+|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 566666666665532 2234556666666666664 442111223332 24666666665 35431 1234455666
Q ss_pred ccccccCC
Q 008026 115 DMAKGSNN 122 (580)
Q Consensus 115 ~~l~l~~n 122 (580)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666665
No 437
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.91 E-value=0.0014 Score=65.94 Aligned_cols=74 Identities=16% Similarity=0.138 Sum_probs=44.2
Q ss_pred cceeeccCcEEEEEEEEcC---------CcEEEEEEeeccccChhhHHHHHHHHHHHHhcCCCc-ccceeeEEEcCCeeE
Q 008026 400 ENILGRGGFGTVYKGELHD---------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH-LVALLGHCLDGNEKL 469 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~ 469 (580)
.+.++.|..-.+|++...+ +..+++|+..... ........|.++++.+...+ ..++++.. . -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 3567778888999997653 2688888765421 11112467888888775323 44666544 2 36
Q ss_pred EEEEecCCCCh
Q 008026 470 LVFEYMPQGTL 480 (580)
Q Consensus 470 lv~e~~~~g~L 480 (580)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987544
No 438
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.75 E-value=0.0054 Score=61.88 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=93.3
Q ss_pred hhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCCcccccCC-ccccCCCCCcEEEccCCcccccCC-CCCccc
Q 008026 36 DVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVP-DSLVKLESLKIVNMTNNLLQGPVP-EFDRSV 112 (580)
Q Consensus 36 ~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~P-~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~ 112 (580)
..+....+|+.+.+..+ +..... .|.++..|+.+.+..+ ++ .|. ..|.++.+|+.+.+..+ ++.+.. .|..+.
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccc
Confidence 34556677777777655 332222 4777888888888765 55 343 45888888888888654 444443 377888
Q ss_pred ccccccccCCCCCCCCCCCchhHHHHHHHHHhhCCccccccccCCCCCCCCccceeccCCcEEEEEecCCcccccCcccc
Q 008026 113 SLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEF 192 (580)
Q Consensus 113 ~L~~l~l~~n~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~p~~~ 192 (580)
+|+.+.+.++.+..++..+|.+ +.+|+.++|..+ ++..-..+|
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~------------------------------------c~~L~~i~lp~~-l~~I~~~aF 329 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMD------------------------------------CVKLSSVTLPTA-LKTIQVYAF 329 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTT------------------------------------CTTCCEEECCTT-CCEECTTTT
T ss_pred ccccccccccccceehhhhhcC------------------------------------CCCCCEEEcCcc-ccEEHHHHh
Confidence 8888888777777666665532 237888888765 653445679
Q ss_pred cCCCCCcEEeccCCcccccC-CccCcCC
Q 008026 193 ASFKSLQRLILADNNLSGMI-PEGLSVL 219 (580)
Q Consensus 193 ~~l~~L~~L~ls~N~l~g~~-p~~l~~l 219 (580)
.+|++|+++.+..+ +. .| ..+|.++
T Consensus 330 ~~C~~L~~i~ip~~-v~-~I~~~aF~~c 355 (379)
T 4h09_A 330 KNCKALSTISYPKS-IT-LIESGAFEGS 355 (379)
T ss_dssp TTCTTCCCCCCCTT-CC-EECTTTTTTS
T ss_pred hCCCCCCEEEECCc-cC-EEchhHhhCC
Confidence 99999999988655 54 34 3345443
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.72 E-value=0.0022 Score=53.82 Aligned_cols=51 Identities=25% Similarity=0.460 Sum_probs=35.8
Q ss_pred EEEecCCccc-ccCcccccCCCCCcEEeccCCcccccCC-ccCcCCCCCCEEEccC
Q 008026 176 VINFQKMNLT-GTISPEFASFKSLQRLILADNNLSGMIP-EGLSVLGALKELDVSN 229 (580)
Q Consensus 176 ~L~ls~n~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~l~~l~~L~~l~ls~ 229 (580)
.++-+++.|+ ..+|..+. ++|+.|+|++|+|+ .+| ..|..+++|+.|+|++
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~ 64 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGA 64 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecC
Confidence 6778888886 45775532 46888999999988 554 4567778888776543
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.70 E-value=0.0062 Score=60.45 Aligned_cols=31 Identities=23% Similarity=0.434 Sum_probs=27.6
Q ss_pred CCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 520 QSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 520 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 5789999999999999878899999987754
No 441
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.58 E-value=0.00064 Score=60.04 Aligned_cols=35 Identities=17% Similarity=0.231 Sum_probs=24.4
Q ss_pred cEEEEEecCCc-ccccCcccccCCCCCcEEeccCCc
Q 008026 173 NITVINFQKMN-LTGTISPEFASFKSLQRLILADNN 207 (580)
Q Consensus 173 ~L~~L~ls~n~-l~~~~p~~~~~l~~L~~L~ls~N~ 207 (580)
+|+.|+|++|. ++..-=..+.++++|+.|+|+++.
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 57888888874 664433456677888888887764
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.42 E-value=0.00061 Score=61.39 Aligned_cols=59 Identities=14% Similarity=0.103 Sum_probs=26.4
Q ss_pred cEEEEEecCCccccc----CcccccCCCCCcEEeccCC---cccc----cCCccCcCCCCCCEEEccCCc
Q 008026 173 NITVINFQKMNLTGT----ISPEFASFKSLQRLILADN---NLSG----MIPEGLSVLGALKELDVSNNQ 231 (580)
Q Consensus 173 ~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~ls~N---~l~g----~~p~~l~~l~~L~~l~ls~N~ 231 (580)
.|+.|+|++|.|... +-+.+..-+.|++|+|++| ++.. .+-..+..-+.|+.|+++.|.
T Consensus 99 tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 99 SLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp SCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred ccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 445555555555421 2223333344566666543 2221 122334444556666665554
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.39 E-value=0.011 Score=59.75 Aligned_cols=147 Identities=16% Similarity=0.181 Sum_probs=83.6
Q ss_pred cceeeccCcEEEEEEEEcC--------CcEEEEEEeecccc------------Chh----hHHHHHHHHHHHHhcC-CCc
Q 008026 400 ENILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVI------------SGK----GLTEFKSEIAVLTKVR-HRH 454 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~------------~~~----~~~~~~~E~~~l~~l~-h~n 454 (580)
.+.|..|-...+|++...+ +..|.+++.-.... +.. ..+....|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3566668888999987653 36788887643210 000 0122335888888885 444
Q ss_pred ccceeeEEEcCCeeEEEEEecCCCChhH--------------HHHHHhhhC---CCCc--cHHHHHHHHHHHH-------
Q 008026 455 LVALLGHCLDGNEKLLVFEYMPQGTLSR--------------HIFNWAEEG---LKPL--EWNRRLTIALDVA------- 508 (580)
Q Consensus 455 iv~~~~~~~~~~~~~lv~e~~~~g~L~~--------------~l~~~~~~~---~~~~--~~~~~~~i~~~i~------- 508 (580)
..++++++.. . +|+||++|.+|.. .+.+..... .... -+..+.++..++.
T Consensus 137 ~Pkl~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5677777643 2 8999998755522 111111111 1111 2234444433321
Q ss_pred ---------------HHHH----HHHhC-CCCCcEecCCCCCCeEecCC------CcEEEEeeccccc
Q 008026 509 ---------------RGVE----YLHGL-AHQSFIHRDLKPSNILLGDD------MRAKVADFGLVRL 550 (580)
Q Consensus 509 ---------------~aL~----~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~Dfg~a~~ 550 (580)
..++ ++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23221 13468999999999999876 7899999988753
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.19 E-value=0.00092 Score=60.22 Aligned_cols=87 Identities=21% Similarity=0.206 Sum_probs=61.2
Q ss_pred hcCcccCceEecccC-cCcCC----C-CCCCCCCCCcEEeccCCcccc----cCCccccCCCCCcEEEccCCcccccCC-
Q 008026 38 IQNMTSLKEIWLHSN-AFSGP----L-PDFSGVKQLESLSLRDNFFTG----PVPDSLVKLESLKIVNMTNNLLQGPVP- 106 (580)
Q Consensus 38 ~~~l~~L~~L~L~~N-~l~~~----~-p~~~~l~~L~~L~L~~N~l~~----~~P~~~~~l~~L~~L~L~~N~l~~~~~- 106 (580)
+.+-+.|++|+|++| .|... + ..+..-+.|+.|+|++|+|.. .|-+.+..-+.|+.|+|++|+|...-.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445578999999986 66531 1 124456789999999999863 234456667889999999999875432
Q ss_pred ----CCCcccccccccccCCCC
Q 008026 107 ----EFDRSVSLDMAKGSNNFC 124 (580)
Q Consensus 107 ----~~~~~~~L~~l~l~~n~~ 124 (580)
.+.....|+.|++++|..
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~ 138 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQ 138 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSS
T ss_pred HHHHHHhhCCceeEEECCCCcC
Confidence 355667789999887643
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.98 E-value=0.021 Score=58.19 Aligned_cols=143 Identities=13% Similarity=0.177 Sum_probs=84.0
Q ss_pred cceeeccCcEEEEEEEEcC--------CcEEEEEEeeccccChhhHHHHHHHHHHHHhcC-CCcccceeeEEEcCCeeEE
Q 008026 400 ENILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLL 470 (580)
Q Consensus 400 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 470 (580)
.+.+..|-...+|+....+ +..|++|+..... .......+|.++++.+. +.-..++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 4567778888999997653 5789999864421 11123457888888775 33345666533 2 278
Q ss_pred EEEecCCCChhH--------------HHHHHhh--h---------CCCCccHHHHHHHHHHH------------------
Q 008026 471 VFEYMPQGTLSR--------------HIFNWAE--E---------GLKPLEWNRRLTIALDV------------------ 507 (580)
Q Consensus 471 v~e~~~~g~L~~--------------~l~~~~~--~---------~~~~~~~~~~~~i~~~i------------------ 507 (580)
||||++|..|.. .+.+... . ...+.-+.++.++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 999999865421 1111100 0 11112244444443322
Q ss_pred -HHHHHHHHhC---------------------CCCCcEecCCCCCCeEecCCCcEEEEeeccccc
Q 008026 508 -ARGVEYLHGL---------------------AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 550 (580)
Q Consensus 508 -~~aL~~LH~~---------------------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 550 (580)
...+++|... ....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2223333211 1245899999999999 7788999999998763
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.04 E-value=0.2 Score=50.76 Aligned_cols=29 Identities=31% Similarity=0.529 Sum_probs=24.5
Q ss_pred cEecCCCCCCeEe------cCCCcEEEEeeccccc
Q 008026 522 FIHRDLKPSNILL------GDDMRAKVADFGLVRL 550 (580)
Q Consensus 522 ivH~Dlkp~NIll------~~~~~~kl~Dfg~a~~ 550 (580)
++|+|+.+.|||+ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 3456799999998754
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.62 E-value=1.5 Score=39.66 Aligned_cols=86 Identities=10% Similarity=0.045 Sum_probs=60.7
Q ss_pred CCCcccceeeEEEcCCeeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHH-HHHhCCCCCcEecCCCC
Q 008026 451 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE-YLHGLAHQSFIHRDLKP 529 (580)
Q Consensus 451 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~-~LH~~~~~~ivH~Dlkp 529 (580)
.||++ -...-.+++.+.+.++.-+++.=...+ ..++...+++++.+|+.... +++. -+|--++|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i--------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI--------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH--------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH--------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 57777 334446667766666654332222222 24677888899988888766 5553 58889999
Q ss_pred CCeEecCCCcEEEEeecccccc
Q 008026 530 SNILLGDDMRAKVADFGLVRLA 551 (580)
Q Consensus 530 ~NIll~~~~~~kl~Dfg~a~~~ 551 (580)
+||+++.++.+++.-.|+-..+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL 134 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB
T ss_pred ceEEEeCCCcEEEEEcCCcccC
Confidence 9999999999999999975544
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.84 E-value=0.083 Score=54.59 Aligned_cols=63 Identities=10% Similarity=0.054 Sum_probs=18.0
Q ss_pred cccceeeccCcEEEEEEEEcC-CcEEEE------EEeeccccChhhHHHHHHHHHHHHhcCCCcccceeeEEE
Q 008026 398 SEENILGRGGFGTVYKGELHD-GTKIAV------KRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL 463 (580)
Q Consensus 398 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 463 (580)
.+.+.+| ||.||+|.+.. ..+||+ |..............+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3445666 99999997753 367888 766554444445567888999999999999999988765
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.57 E-value=1.4 Score=39.75 Aligned_cols=87 Identities=13% Similarity=0.095 Sum_probs=62.5
Q ss_pred CCCcccceeeEEEcCCeeEEEEEecC-CCChhHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCC
Q 008026 451 RHRHLVALLGHCLDGNEKLLVFEYMP-QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKP 529 (580)
Q Consensus 451 ~h~niv~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~~~~ivH~Dlkp 529 (580)
.||+++.. .+-.+.+.+.+.++.-+ +-++.. + +..+...+++++.+|+...++++. =+|--++|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i--------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P 107 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I--------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAP 107 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G--------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H--------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEec
Confidence 57888866 45556666555555443 223322 2 346778889999999988866664 48889999
Q ss_pred CCeEecCCCcEEEEeeccccccC
Q 008026 530 SNILLGDDMRAKVADFGLVRLAP 552 (580)
Q Consensus 530 ~NIll~~~~~~kl~Dfg~a~~~~ 552 (580)
+|++++.++.+++.-.|+-..+.
T Consensus 108 ~NL~f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 108 DELFFTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp GGEEECTTSCEEESCCEETTTBS
T ss_pred ceEEEcCCCCEEEEEccCccCCC
Confidence 99999999999999999755443
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=42.21 E-value=68 Score=24.60 Aligned_cols=45 Identities=27% Similarity=0.314 Sum_probs=28.6
Q ss_pred CCCCCchhhcCcccCceEecccCcCcCCCC-CCCCCCCCcEEeccCC
Q 008026 30 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDN 75 (580)
Q Consensus 30 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N 75 (580)
.++..-.+|.++++|+.+.|..+ ++.+-. .|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 44444567777777877777765 332333 4777777777777654
No 451
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=35.69 E-value=4.1e+02 Score=27.86 Aligned_cols=86 Identities=15% Similarity=0.160 Sum_probs=48.7
Q ss_pred cceeeEEEcCCeeEEEEEecCCCChhHHHH----------HHhhhCCCC--ccHHHHHHHHHHHH--HHHHHHHhCCCCC
Q 008026 456 VALLGHCLDGNEKLLVFEYMPQGTLSRHIF----------NWAEEGLKP--LEWNRRLTIALDVA--RGVEYLHGLAHQS 521 (580)
Q Consensus 456 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~----------~~~~~~~~~--~~~~~~~~i~~~i~--~aL~~LH~~~~~~ 521 (580)
+..|.+...... +=+.|++++.++.+.+. +........ ..+..+..++..+| +.+.|+=.
T Consensus 402 i~~Y~Vipls~~-~GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTK-HGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSS-EEEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCC-CceEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 344455444433 33467777655555442 211111111 12334445554443 34566643
Q ss_pred cEecCCCCCCeEecCCCcEEEEeecccc
Q 008026 522 FIHRDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 522 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
| +|=.++|||++.+|++.=+|||.+-
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 2 4888999999999999999999873
No 452
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=30.99 E-value=2.1e+02 Score=27.50 Aligned_cols=78 Identities=15% Similarity=0.142 Sum_probs=42.0
Q ss_pred eeEEEEEecCCCChhHHHHHHhhhCCCCccHHHHHHHHHHH--HHHHHHHH-hCCCCCcEe-cCCCCCCeEecCCC-cEE
Q 008026 467 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV--ARGVEYLH-GLAHQSFIH-RDLKPSNILLGDDM-RAK 541 (580)
Q Consensus 467 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~i~~~i--~~aL~~LH-~~~~~~ivH-~Dlkp~NIll~~~~-~~k 541 (580)
..+++|||.+|..|.+.-.....+ .+..+. +.++ +-+++... ...+.+.+. ..-.+.|||+++++ .+.
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~---~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~ 228 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPE---VLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVV 228 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHH---HSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEE
T ss_pred cceehhhhcCCCccccchhhhhhh---hcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEE
Confidence 456999999877665432110001 122222 2222 22344444 333333322 23578899998654 489
Q ss_pred EEeecccccc
Q 008026 542 VADFGLVRLA 551 (580)
Q Consensus 542 l~Dfg~a~~~ 551 (580)
++|-+.+...
T Consensus 229 ~IDhn~af~~ 238 (342)
T 1cja_A 229 PIDSKIIPLD 238 (342)
T ss_dssp ECSCCCCCCC
T ss_pred EEcCCccccC
Confidence 9999998654
No 453
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=23.33 E-value=41 Score=36.00 Aligned_cols=25 Identities=28% Similarity=0.363 Sum_probs=22.9
Q ss_pred cCCCCCCeEecCCCcEEEEeecccc
Q 008026 525 RDLKPSNILLGDDMRAKVADFGLVR 549 (580)
Q Consensus 525 ~Dlkp~NIll~~~~~~kl~Dfg~a~ 549 (580)
+|=+++||||+.+|.+.=+|||.+-
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 5889999999999999999999874
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.07 E-value=1e+02 Score=23.58 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=32.5
Q ss_pred cccccCcccccCCCCCcEEeccCCcccccCCccCcCCCCCCEEEccCC
Q 008026 183 NLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 230 (580)
Q Consensus 183 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ls~N 230 (580)
.++..-...|.+|++|+++.|-.+ ++..-..+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344344457888999999988766 33133557888999998887543
Done!