Query 008028
Match_columns 580
No_of_seqs 261 out of 2846
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 18:31:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008028.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008028hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 2.2E-62 4.7E-67 543.3 47.7 440 82-558 479-970 (977)
2 PRK14098 glycogen synthase; Pr 100.0 4.7E-62 1E-66 529.6 48.1 445 84-556 5-487 (489)
3 PRK14099 glycogen synthase; Pr 100.0 1.6E-61 3.4E-66 525.0 47.7 445 82-558 1-482 (485)
4 PLN02316 synthase/transferase 100.0 3.1E-59 6.7E-64 527.6 47.2 433 78-556 581-1035(1036)
5 TIGR02095 glgA glycogen/starch 100.0 4.2E-59 9.1E-64 508.2 46.6 435 85-555 1-473 (473)
6 PRK00654 glgA glycogen synthas 100.0 1.4E-57 3.1E-62 494.6 47.1 429 85-557 1-465 (466)
7 cd03791 GT1_Glycogen_synthase_ 100.0 7.1E-56 1.5E-60 483.6 45.9 437 86-553 1-475 (476)
8 cd04299 GT1_Glycogen_Phosphory 100.0 1.7E-56 3.6E-61 497.0 36.6 495 35-552 30-687 (778)
9 COG0297 GlgA Glycogen synthase 100.0 1.8E-53 3.9E-58 451.3 40.5 441 85-558 1-481 (487)
10 TIGR02094 more_P_ylases alpha- 100.0 5.1E-51 1.1E-55 446.9 39.7 443 87-552 1-598 (601)
11 PRK10307 putative glycosyl tra 100.0 4.3E-36 9.3E-41 321.8 36.4 385 85-558 1-411 (412)
12 TIGR03449 mycothiol_MshA UDP-N 100.0 3E-36 6.4E-41 322.1 34.0 373 87-556 1-403 (405)
13 TIGR02468 sucrsPsyn_pln sucros 100.0 5.7E-36 1.2E-40 338.0 34.9 430 83-558 168-674 (1050)
14 TIGR02149 glgA_Coryne glycogen 100.0 1.8E-35 3.9E-40 313.7 35.1 362 85-556 1-388 (388)
15 TIGR02472 sucr_P_syn_N sucrose 100.0 2.3E-35 4.9E-40 318.5 36.2 372 95-553 22-439 (439)
16 cd03796 GT1_PIG-A_like This fa 100.0 4.1E-35 8.9E-40 312.8 36.1 360 86-558 1-371 (398)
17 PRK15427 colanic acid biosynth 100.0 1.9E-35 4.2E-40 315.4 32.1 271 227-554 118-405 (406)
18 PLN02871 UDP-sulfoquinovose:DA 100.0 3.2E-35 6.9E-40 319.7 33.2 364 82-557 56-437 (465)
19 cd04962 GT1_like_5 This family 100.0 4.7E-34 1E-38 300.6 34.7 360 85-555 1-371 (371)
20 PRK15484 lipopolysaccharide 1, 100.0 7.3E-34 1.6E-38 301.0 34.6 360 86-556 4-379 (380)
21 TIGR02470 sucr_synth sucrose s 100.0 1.1E-33 2.5E-38 313.9 35.7 302 227-552 385-745 (784)
22 TIGR03088 stp2 sugar transfera 100.0 3.9E-33 8.4E-38 294.7 30.8 356 85-555 2-373 (374)
23 cd03818 GT1_ExpC_like This fam 100.0 1.6E-32 3.4E-37 292.7 34.9 227 281-550 152-396 (396)
24 PLN00142 sucrose synthase 100.0 2.5E-32 5.5E-37 303.1 31.6 312 227-552 408-768 (815)
25 cd03800 GT1_Sucrose_synthase T 100.0 5.7E-32 1.2E-36 287.1 32.5 356 100-549 20-397 (398)
26 cd03802 GT1_AviGT4_like This f 100.0 1.9E-31 4.2E-36 276.3 34.1 329 85-553 1-335 (335)
27 cd03805 GT1_ALG2_like This fam 100.0 1.4E-31 3E-36 284.4 31.4 228 279-548 148-392 (392)
28 cd03792 GT1_Trehalose_phosphor 100.0 6E-31 1.3E-35 278.1 34.5 275 227-555 85-372 (372)
29 PLN02846 digalactosyldiacylgly 100.0 1.4E-31 3E-36 284.5 29.4 373 83-555 3-392 (462)
30 PRK09922 UDP-D-galactose:(gluc 100.0 1.9E-31 4.1E-36 280.6 27.8 347 85-556 1-357 (359)
31 PRK10125 putative glycosyl tra 100.0 8.1E-31 1.8E-35 279.1 32.6 214 284-555 189-405 (405)
32 cd04955 GT1_like_6 This family 100.0 3.2E-30 6.9E-35 270.0 35.1 349 86-553 1-363 (363)
33 cd03819 GT1_WavL_like This fam 100.0 8.1E-31 1.7E-35 273.9 30.5 267 227-544 78-355 (355)
34 cd04951 GT1_WbdM_like This fam 100.0 2.7E-30 5.8E-35 270.0 33.4 351 86-553 1-359 (360)
35 cd03807 GT1_WbnK_like This fam 100.0 1.4E-30 3E-35 270.3 31.0 352 86-553 1-365 (365)
36 cd03825 GT1_wcfI_like This fam 100.0 3.5E-30 7.6E-35 269.7 31.8 223 284-555 134-365 (365)
37 cd05844 GT1_like_7 Glycosyltra 100.0 3.6E-30 7.8E-35 270.6 31.8 262 227-550 82-366 (367)
38 PRK15179 Vi polysaccharide bio 100.0 5.6E-30 1.2E-34 285.0 33.3 279 227-553 400-692 (694)
39 cd03822 GT1_ecORF704_like This 100.0 2.7E-29 5.8E-34 262.1 35.1 350 86-553 1-366 (366)
40 cd03823 GT1_ExpE7_like This fa 100.0 1E-29 2.2E-34 264.0 30.9 356 86-553 1-358 (359)
41 cd03812 GT1_CapH_like This fam 100.0 4.5E-30 9.8E-35 268.5 28.2 340 86-542 1-350 (358)
42 cd03814 GT1_like_2 This family 100.0 1E-29 2.2E-34 264.9 30.6 226 277-553 136-364 (364)
43 cd03795 GT1_like_4 This family 100.0 2.3E-29 4.9E-34 262.7 32.4 345 86-545 1-357 (357)
44 cd03821 GT1_Bme6_like This fam 100.0 1.7E-29 3.8E-34 263.0 31.4 225 280-550 144-375 (375)
45 cd03799 GT1_amsK_like This is 100.0 2.7E-29 5.8E-34 262.0 32.4 262 227-547 79-354 (355)
46 cd03794 GT1_wbuB_like This fam 100.0 5E-29 1.1E-33 260.7 32.6 368 86-549 1-394 (394)
47 PRK15490 Vi polysaccharide bio 100.0 2.1E-29 4.6E-34 268.6 29.9 278 227-554 280-575 (578)
48 cd03801 GT1_YqgM_like This fam 100.0 1.1E-28 2.3E-33 255.2 34.2 358 86-553 1-374 (374)
49 cd03809 GT1_mtfB_like This fam 100.0 3.2E-29 6.9E-34 261.5 29.2 350 86-550 1-365 (365)
50 KOG1111 N-acetylglucosaminyltr 100.0 3.1E-30 6.7E-35 253.7 19.0 363 85-559 1-371 (426)
51 cd03817 GT1_UGDG_like This fam 100.0 1.2E-28 2.5E-33 257.0 30.9 353 86-554 1-373 (374)
52 cd03808 GT1_cap1E_like This fa 100.0 1.5E-28 3.4E-33 253.9 29.8 345 86-549 1-358 (359)
53 cd03820 GT1_amsD_like This fam 100.0 3.3E-28 7.1E-33 250.4 30.7 337 86-549 1-347 (348)
54 cd03798 GT1_wlbH_like This fam 100.0 7.4E-28 1.6E-32 249.9 33.1 368 87-555 1-377 (377)
55 cd03813 GT1_like_3 This family 100.0 2.8E-29 6E-34 273.6 23.0 223 279-553 238-475 (475)
56 cd03806 GT1_ALG11_like This fa 100.0 2.4E-28 5.1E-33 261.9 29.1 217 278-546 182-418 (419)
57 PLN02949 transferase, transfer 100.0 9.7E-28 2.1E-32 258.4 32.2 227 281-558 216-460 (463)
58 COG0058 GlgP Glucan phosphoryl 100.0 1E-29 2.2E-34 276.3 15.5 504 36-556 36-705 (750)
59 cd03816 GT1_ALG1_like This fam 100.0 4E-27 8.8E-32 252.4 33.8 223 279-542 154-404 (415)
60 cd03793 GT1_Glycogen_synthase_ 100.0 4.7E-28 1E-32 258.3 24.1 415 99-557 14-589 (590)
61 cd03811 GT1_WabH_like This fam 100.0 2.3E-26 5E-31 236.8 29.3 331 86-532 1-341 (353)
62 PHA01633 putative glycosyl tra 100.0 7.3E-26 1.6E-30 232.1 31.0 225 277-550 84-335 (335)
63 TIGR03087 stp1 sugar transfera 99.9 1.3E-26 2.8E-31 247.3 23.4 221 278-553 165-395 (397)
64 PHA01630 putative group 1 glyc 99.9 1.9E-26 4.1E-31 238.7 23.3 230 278-554 86-330 (331)
65 cd03804 GT1_wbaZ_like This fam 99.9 2.1E-26 4.7E-31 241.1 23.5 205 278-548 146-350 (351)
66 PLN02501 digalactosyldiacylgly 99.9 2.5E-25 5.3E-30 239.6 29.6 207 286-552 499-707 (794)
67 TIGR02918 accessory Sec system 99.9 1.2E-25 2.6E-30 244.5 27.7 222 283-554 268-499 (500)
68 cd04946 GT1_AmsK_like This fam 99.9 4.6E-25 9.9E-30 235.9 27.8 263 227-549 127-406 (407)
69 PF08323 Glyco_transf_5: Starc 99.9 2.3E-26 4.9E-31 228.2 15.7 210 86-315 1-244 (245)
70 PLN02275 transferase, transfer 99.9 3.3E-23 7.1E-28 219.0 29.9 190 278-519 158-371 (371)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 2.1E-24 4.6E-29 233.5 20.6 288 228-552 131-459 (460)
72 TIGR02400 trehalose_OtsA alpha 99.9 1.1E-23 2.4E-28 226.4 23.9 288 228-552 127-454 (456)
73 cd04949 GT1_gtfA_like This fam 99.9 6.1E-24 1.3E-28 224.2 20.6 213 281-548 153-372 (372)
74 PRK14986 glycogen phosphorylas 99.9 4E-23 8.7E-28 227.7 23.0 394 96-494 119-694 (815)
75 PRK00726 murG undecaprenyldiph 99.9 3.5E-22 7.7E-27 209.9 28.6 341 85-553 2-356 (357)
76 cd04300 GT1_Glycogen_Phosphory 99.9 1E-22 2.2E-27 225.1 22.8 393 96-494 102-681 (797)
77 PRK14985 maltodextrin phosphor 99.9 5E-23 1.1E-27 226.1 19.0 393 96-494 108-680 (798)
78 TIGR02093 P_ylase glycogen/sta 99.9 6.8E-23 1.5E-27 225.4 18.4 393 96-494 99-678 (794)
79 cd03785 GT1_MurG MurG is an N- 99.9 4.7E-21 1E-25 200.5 28.6 333 86-545 1-348 (350)
80 TIGR01133 murG undecaprenyldip 99.9 3.6E-21 7.9E-26 201.2 27.6 321 85-534 1-332 (348)
81 PLN03063 alpha,alpha-trehalose 99.9 2.4E-21 5.2E-26 220.6 23.8 295 227-557 146-480 (797)
82 PRK13609 diacylglycerol glucos 99.9 8.3E-20 1.8E-24 193.7 28.8 223 281-555 143-372 (380)
83 PRK14501 putative bifunctional 99.9 8E-21 1.7E-25 216.5 18.6 293 227-557 132-465 (726)
84 PLN02605 monogalactosyldiacylg 99.9 1.9E-19 4.2E-24 191.0 27.5 263 227-551 100-378 (382)
85 PF00534 Glycos_transf_1: Glyc 99.9 1.9E-20 4.2E-25 175.5 16.8 164 356-535 2-170 (172)
86 cd04950 GT1_like_1 Glycosyltra 99.8 5.2E-19 1.1E-23 187.1 29.0 222 277-554 145-371 (373)
87 PF00343 Phosphorylase: Carboh 99.8 5.4E-20 1.2E-24 200.6 20.1 392 98-494 21-595 (713)
88 TIGR02398 gluc_glyc_Psyn gluco 99.8 6.8E-19 1.5E-23 188.5 23.3 289 227-552 131-480 (487)
89 PRK05749 3-deoxy-D-manno-octul 99.8 5.7E-19 1.2E-23 190.1 21.6 234 277-557 170-422 (425)
90 KOG0853 Glycosyltransferase [C 99.8 2.1E-18 4.6E-23 181.2 25.1 391 82-556 32-469 (495)
91 PRK13608 diacylglycerol glucos 99.8 2.5E-18 5.5E-23 182.9 24.5 222 282-556 144-373 (391)
92 cd01635 Glycosyltransferase_GT 99.8 3.1E-17 6.7E-22 159.1 21.0 118 376-493 109-229 (229)
93 PF05693 Glycogen_syn: Glycoge 99.8 1.3E-16 2.8E-21 169.8 24.2 408 99-558 9-585 (633)
94 PLN03064 alpha,alpha-trehalose 99.7 4.9E-16 1.1E-20 176.5 23.4 294 227-556 230-563 (934)
95 TIGR00236 wecB UDP-N-acetylglu 99.7 5.9E-16 1.3E-20 163.3 21.8 265 227-550 86-363 (365)
96 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 8.8E-15 1.9E-19 154.0 26.9 246 227-530 88-344 (363)
97 PRK09814 beta-1,6-galactofuran 99.7 1.4E-14 3E-19 150.9 27.6 185 276-534 114-309 (333)
98 PRK00025 lpxB lipid-A-disaccha 99.7 6E-15 1.3E-19 156.4 24.6 220 280-556 129-375 (380)
99 COG0438 RfaG Glycosyltransfera 99.7 1.8E-14 4E-19 147.0 24.4 223 285-557 150-379 (381)
100 KOG1387 Glycosyltransferase [C 99.6 6.3E-13 1.4E-17 131.1 22.8 223 284-558 221-462 (465)
101 PF13692 Glyco_trans_1_4: Glyc 99.5 2E-14 4.3E-19 129.0 8.9 130 371-521 2-135 (135)
102 PRK10117 trehalose-6-phosphate 99.4 5.7E-12 1.2E-16 134.1 20.7 291 228-556 123-455 (474)
103 TIGR00215 lpxB lipid-A-disacch 99.4 8.8E-11 1.9E-15 124.7 27.5 194 279-521 132-347 (385)
104 KOG2941 Beta-1,4-mannosyltrans 99.4 4.9E-11 1.1E-15 118.1 22.5 239 278-543 162-430 (444)
105 PF00982 Glyco_transf_20: Glyc 99.4 2.4E-11 5.2E-16 130.9 20.0 292 227-553 140-473 (474)
106 TIGR03713 acc_sec_asp1 accesso 99.4 2.5E-11 5.4E-16 132.6 20.4 162 372-552 320-519 (519)
107 PLN02205 alpha,alpha-trehalose 99.3 2.4E-10 5.2E-15 131.0 22.4 293 229-556 203-553 (854)
108 COG0380 OtsA Trehalose-6-phosp 99.3 2.5E-09 5.3E-14 113.6 26.9 291 228-554 147-479 (486)
109 PF13439 Glyco_transf_4: Glyco 99.1 2.4E-10 5.2E-15 106.3 10.0 162 91-331 4-176 (177)
110 PRK12446 undecaprenyldiphospho 99.0 1.4E-07 3E-12 99.0 27.7 328 100-552 11-349 (352)
111 PF13579 Glyco_trans_4_4: Glyc 99.0 7.8E-10 1.7E-14 101.0 8.1 154 101-325 1-160 (160)
112 PF13524 Glyco_trans_1_2: Glyc 99.0 1.2E-09 2.7E-14 91.2 8.2 89 448-550 1-92 (92)
113 TIGR02919 accessory Sec system 99.0 1.4E-08 2.9E-13 108.8 17.5 177 284-529 238-417 (438)
114 COG0707 MurG UDP-N-acetylgluco 99.0 9.4E-07 2E-11 92.2 29.7 342 85-555 1-354 (357)
115 KOG3742 Glycogen synthase [Car 98.9 3.6E-09 7.9E-14 107.7 6.9 105 441-553 496-611 (692)
116 TIGR03568 NeuC_NnaA UDP-N-acet 98.6 4.6E-06 1E-10 88.0 21.9 237 227-520 93-338 (365)
117 PF09314 DUF1972: Domain of un 98.4 1.1E-05 2.3E-10 75.8 14.2 174 86-327 3-185 (185)
118 TIGR03492 conserved hypothetic 98.3 0.00017 3.6E-09 77.0 22.9 192 280-532 155-373 (396)
119 cd03784 GT1_Gtf_like This fami 98.2 0.00014 3.1E-09 77.6 19.9 124 370-521 239-372 (401)
120 PF04007 DUF354: Protein of un 98.1 6.6E-05 1.4E-09 77.6 15.7 179 281-520 121-309 (335)
121 PF02350 Epimerase_2: UDP-N-ac 98.1 0.00019 4.1E-09 75.1 19.2 266 227-552 67-345 (346)
122 PF13528 Glyco_trans_1_3: Glyc 98.1 0.00024 5.2E-09 73.2 19.5 118 370-517 192-316 (318)
123 TIGR03590 PseG pseudaminic aci 98.1 0.00044 9.4E-09 70.2 20.2 96 372-477 172-268 (279)
124 COG0763 LpxB Lipid A disacchar 98.0 0.00047 1E-08 71.0 18.4 196 279-521 130-344 (381)
125 PF13844 Glyco_transf_41: Glyc 98.0 0.00028 6E-09 75.6 17.3 183 360-556 276-468 (468)
126 PF02684 LpxB: Lipid-A-disacch 97.9 0.0015 3.3E-08 68.6 20.7 195 279-521 127-340 (373)
127 KOG2099 Glycogen phosphorylase 97.8 3.7E-05 8E-10 81.2 6.8 215 274-494 439-714 (843)
128 PF13477 Glyco_trans_4_2: Glyc 97.7 0.00085 1.8E-08 60.1 13.4 133 86-293 1-139 (139)
129 PF11897 DUF3417: Protein of u 97.6 8.9E-06 1.9E-10 70.6 -0.7 62 35-96 46-114 (118)
130 COG0381 WecB UDP-N-acetylgluco 97.6 0.037 8E-07 57.5 25.2 273 227-555 92-371 (383)
131 COG3914 Spy Predicted O-linked 97.6 0.039 8.4E-07 59.6 25.3 179 360-558 421-617 (620)
132 PRK01021 lpxB lipid-A-disaccha 97.6 0.0075 1.6E-07 66.4 20.2 154 279-476 355-514 (608)
133 COG1519 KdtA 3-deoxy-D-manno-o 97.5 0.022 4.9E-07 59.6 22.3 209 277-535 169-398 (419)
134 PRK02797 4-alpha-L-fucosyltran 97.4 0.013 2.9E-07 59.0 18.3 165 372-556 146-318 (322)
135 TIGR00661 MJ1255 conserved hyp 97.3 0.0095 2.1E-07 61.7 17.3 118 373-521 191-314 (321)
136 COG1817 Uncharacterized protei 96.8 0.089 1.9E-06 52.8 17.5 185 280-521 121-314 (346)
137 PRK10017 colanic acid biosynth 96.8 1.1 2.3E-05 48.4 26.9 134 387-535 260-404 (426)
138 TIGR01426 MGT glycosyltransfer 96.7 0.023 5.1E-07 60.4 13.9 156 372-551 227-389 (392)
139 PF07429 Glyco_transf_56: 4-al 96.5 0.89 1.9E-05 46.7 22.0 164 372-555 185-356 (360)
140 KOG1050 Trehalose-6-phosphate 96.3 0.26 5.7E-06 56.1 19.1 258 228-522 141-441 (732)
141 PF12000 Glyco_trans_4_3: Gkyc 96.2 0.06 1.3E-06 50.1 11.0 108 196-331 42-170 (171)
142 PF04464 Glyphos_transf: CDP-G 95.2 0.38 8.3E-06 50.7 14.1 201 279-521 128-336 (369)
143 COG1819 Glycosyl transferases, 94.8 0.5 1.1E-05 50.7 13.7 154 372-552 239-399 (406)
144 PRK14089 ipid-A-disaccharide s 94.4 1.8 4E-05 45.2 16.5 91 372-476 169-261 (347)
145 COG4641 Uncharacterized protei 94.3 0.27 5.8E-06 50.8 9.6 207 286-556 139-363 (373)
146 PHA03392 egt ecdysteroid UDP-g 93.3 1.2 2.6E-05 49.3 13.2 122 372-521 298-432 (507)
147 PF10087 DUF2325: Uncharacteri 92.7 0.37 8E-06 40.4 6.4 79 403-482 2-88 (97)
148 PF06925 MGDG_synth: Monogalac 92.1 0.79 1.7E-05 42.6 8.5 79 227-323 89-168 (169)
149 COG3660 Predicted nucleoside-d 92.0 5.9 0.00013 39.2 14.3 196 226-478 69-274 (329)
150 TIGR02195 heptsyl_trn_II lipop 90.4 2.7 5.9E-05 43.5 11.5 112 356-476 161-277 (334)
151 PF01075 Glyco_transf_9: Glyco 89.0 3.6 7.7E-05 40.5 10.6 102 370-476 105-209 (247)
152 PLN02448 UDP-glycosyltransfera 88.7 7.4 0.00016 42.5 13.7 133 372-521 276-415 (459)
153 COG3980 spsG Spore coat polysa 88.6 25 0.00054 35.3 15.6 87 373-471 161-248 (318)
154 PRK10422 lipopolysaccharide co 88.6 19 0.00041 37.6 16.3 102 371-477 184-289 (352)
155 PF06258 Mito_fiss_Elm1: Mitoc 88.5 3.4 7.4E-05 42.5 10.2 117 357-479 135-259 (311)
156 PF05159 Capsule_synth: Capsul 87.6 2.9 6.4E-05 41.9 9.1 101 369-478 115-227 (269)
157 TIGR02193 heptsyl_trn_I lipopo 87.0 15 0.00034 37.5 14.3 98 372-476 181-280 (319)
158 TIGR03609 S_layer_CsaB polysac 86.9 15 0.00032 37.3 14.0 100 372-476 173-276 (298)
159 KOG0780 Signal recognition par 86.7 13 0.00029 38.9 12.9 164 374-553 157-341 (483)
160 PLN02670 transferase, transfer 85.1 17 0.00036 39.8 13.8 108 442-555 352-466 (472)
161 cd03789 GT1_LPS_heptosyltransf 83.8 7.2 0.00016 39.2 9.8 99 373-478 124-226 (279)
162 PF00862 Sucrose_synth: Sucros 83.8 5.3 0.00011 43.2 8.8 42 85-128 273-335 (550)
163 TIGR02201 heptsyl_trn_III lipo 83.5 18 0.00039 37.6 12.9 100 372-476 183-286 (344)
164 PF04101 Glyco_tran_28_C: Glyc 82.9 0.19 4.2E-06 46.5 -2.0 81 427-521 56-144 (167)
165 PRK10916 ADP-heptose:LPS hepto 81.8 14 0.00031 38.4 11.4 97 373-476 183-287 (348)
166 COG0859 RfaF ADP-heptose:LPS h 81.5 11 0.00023 39.2 10.2 100 372-478 177-279 (334)
167 PF08660 Alg14: Oligosaccharid 79.7 39 0.00085 31.4 12.3 67 227-301 92-162 (170)
168 PLN02562 UDP-glycosyltransfera 77.4 41 0.00089 36.5 13.5 129 372-521 275-413 (448)
169 KOG1021 Acetylglucosaminyltran 77.2 24 0.00053 38.5 11.6 85 437-534 335-422 (464)
170 PLN02410 UDP-glucoronosyl/UDP- 75.6 38 0.00082 36.8 12.6 133 372-521 266-410 (451)
171 COG2910 Putative NADH-flavin r 74.1 4.1 8.8E-05 38.2 3.9 34 85-128 1-34 (211)
172 COG4671 Predicted glycosyl tra 74.1 1.2E+02 0.0026 31.7 25.9 136 371-521 220-365 (400)
173 PLN02554 UDP-glycosyltransfera 74.0 37 0.0008 37.3 12.1 141 372-520 276-439 (481)
174 PF01113 DapB_N: Dihydrodipico 73.9 7 0.00015 34.2 5.3 42 439-480 61-102 (124)
175 PLN03007 UDP-glucosyltransfera 73.7 52 0.0011 36.1 13.2 139 372-521 287-440 (482)
176 PF00201 UDPGT: UDP-glucoronos 72.6 20 0.00043 39.4 9.7 127 370-521 276-409 (500)
177 PRK10964 ADP-heptose:LPS hepto 72.5 34 0.00074 35.1 11.0 98 373-477 181-280 (322)
178 PF03016 Exostosin: Exostosin 71.6 16 0.00034 37.0 8.1 68 439-516 230-300 (302)
179 PF01975 SurE: Survival protei 70.3 4.4 9.6E-05 38.7 3.4 38 85-129 1-38 (196)
180 PF02951 GSH-S_N: Prokaryotic 70.1 4.9 0.00011 35.0 3.3 40 85-127 1-40 (119)
181 PLN02167 UDP-glycosyltransfera 69.8 84 0.0018 34.4 13.7 139 372-521 282-434 (475)
182 PLN02210 UDP-glucosyl transfer 69.5 68 0.0015 34.9 12.8 73 442-521 337-415 (456)
183 PLN03004 UDP-glycosyltransfera 69.4 54 0.0012 35.7 11.9 137 372-521 272-424 (451)
184 PLN02863 UDP-glucoronosyl/UDP- 68.4 85 0.0018 34.4 13.3 39 84-128 9-47 (477)
185 PF12038 DUF3524: Domain of un 67.6 16 0.00035 33.7 6.2 35 85-127 1-35 (168)
186 PLN02173 UDP-glucosyl transfer 65.5 1.4E+02 0.003 32.6 14.0 87 426-521 317-408 (449)
187 PF03033 Glyco_transf_28: Glyc 65.0 7.8 0.00017 34.1 3.7 28 100-127 8-35 (139)
188 PRK00207 sulfur transfer compl 64.1 10 0.00022 33.5 4.2 39 85-126 1-40 (128)
189 PLN02764 glycosyltransferase f 63.6 1.6E+02 0.0035 32.0 14.1 40 83-128 4-43 (453)
190 PLN02208 glycosyltransferase f 63.6 1.3E+02 0.0029 32.5 13.5 72 442-521 324-401 (442)
191 PLN00164 glucosyltransferase; 63.0 77 0.0017 34.8 11.7 74 442-521 352-431 (480)
192 KOG4626 O-linked N-acetylgluco 63.0 49 0.0011 36.9 9.7 181 359-558 749-944 (966)
193 TIGR00696 wecB_tagA_cpsF bacte 61.0 45 0.00098 31.2 8.1 97 385-484 33-139 (177)
194 PLN02555 limonoid glucosyltran 59.8 1.7E+02 0.0037 32.1 13.6 38 85-128 8-45 (480)
195 PF03808 Glyco_tran_WecB: Glyc 59.8 42 0.0009 31.2 7.7 99 383-484 31-140 (172)
196 PLN02207 UDP-glycosyltransfera 59.0 1.7E+02 0.0036 32.1 13.2 138 372-520 277-425 (468)
197 PLN02152 indole-3-acetate beta 57.9 1.2E+02 0.0027 32.9 12.0 137 372-521 263-417 (455)
198 cd06533 Glyco_transf_WecG_TagA 54.1 63 0.0014 30.0 7.9 101 381-484 27-138 (171)
199 PHA03392 egt ecdysteroid UDP-g 53.5 13 0.00029 41.0 3.8 39 85-128 21-59 (507)
200 PF06564 YhjQ: YhjQ protein; 53.4 12 0.00027 36.9 3.2 37 85-127 1-39 (243)
201 PF11997 DUF3492: Domain of un 52.8 10 0.00022 38.2 2.4 43 85-128 1-43 (268)
202 COG0541 Ffh Signal recognition 51.7 3.4E+02 0.0074 29.3 13.8 163 376-551 158-339 (451)
203 PF09949 DUF2183: Uncharacteri 51.3 28 0.00061 29.3 4.5 33 399-431 63-95 (100)
204 cd03146 GAT1_Peptidase_E Type 50.7 1.1E+02 0.0024 29.3 9.4 97 383-479 14-124 (212)
205 PRK10037 cell division protein 49.4 16 0.00034 36.2 3.3 37 85-127 1-39 (250)
206 COG2327 WcaK Polysaccharide py 48.4 2.5E+02 0.0055 29.8 11.9 123 386-521 224-350 (385)
207 PRK00048 dihydrodipicolinate r 48.4 59 0.0013 32.4 7.2 41 440-480 55-95 (257)
208 PRK03692 putative UDP-N-acetyl 48.2 77 0.0017 31.4 7.8 97 385-484 90-196 (243)
209 PLN02992 coniferyl-alcohol glu 47.2 1.4E+02 0.0029 32.9 10.3 72 442-521 351-427 (481)
210 TIGR01425 SRP54_euk signal rec 46.7 3.8E+02 0.0083 28.9 13.3 152 387-551 169-339 (429)
211 PLN00414 glycosyltransferase f 45.2 1.1E+02 0.0024 33.2 9.2 73 442-521 325-402 (446)
212 TIGR01007 eps_fam capsular exo 44.7 22 0.00049 33.7 3.4 37 85-127 17-55 (204)
213 PF03358 FMN_red: NADPH-depend 44.2 32 0.00069 30.8 4.2 40 85-127 1-40 (152)
214 COG0111 SerA Phosphoglycerate 42.7 76 0.0016 32.9 7.1 82 400-483 142-240 (324)
215 TIGR03453 partition_RepA plasm 42.5 44 0.00095 35.5 5.5 39 83-127 102-142 (387)
216 PF12996 DUF3880: DUF based on 41.2 62 0.0014 25.7 4.9 45 281-336 14-58 (79)
217 PF02374 ArsA_ATPase: Anion-tr 40.8 25 0.00054 36.1 3.2 37 85-128 1-39 (305)
218 PRK08410 2-hydroxyacid dehydro 40.4 71 0.0015 32.8 6.5 45 439-483 190-239 (311)
219 PF11440 AGT: DNA alpha-glucos 40.4 4.1E+02 0.0089 26.9 12.0 136 375-521 187-353 (355)
220 PLN02534 UDP-glycosyltransfera 40.2 5.5E+02 0.012 28.3 14.1 39 84-128 8-46 (491)
221 PLN00016 RNA-binding protein; 39.9 21 0.00046 37.6 2.6 38 84-127 52-89 (378)
222 CHL00072 chlL photochlorophyll 39.6 26 0.00056 35.6 3.1 35 85-127 1-37 (290)
223 PRK13398 3-deoxy-7-phosphohept 38.7 3.8E+02 0.0081 26.9 11.2 103 372-477 27-142 (266)
224 PRK13849 putative crown gall t 38.6 33 0.00071 33.6 3.5 38 85-128 1-40 (231)
225 COG0003 ArsA Predicted ATPase 38.4 25 0.00054 36.3 2.8 77 85-179 2-80 (322)
226 COG1703 ArgK Putative periplas 37.8 2.4E+02 0.0052 28.9 9.4 28 101-128 62-89 (323)
227 TIGR01915 npdG NADPH-dependent 37.8 33 0.00072 33.2 3.4 26 101-126 7-32 (219)
228 PRK06249 2-dehydropantoate 2-r 36.8 41 0.00089 34.5 4.1 35 82-127 3-37 (313)
229 PF15024 Glyco_transf_18: Glyc 36.8 92 0.002 34.5 6.8 156 373-554 279-455 (559)
230 PRK13671 hypothetical protein; 36.4 2E+02 0.0043 29.4 8.8 136 373-543 2-139 (298)
231 PF02826 2-Hacid_dh_C: D-isome 35.9 1.4E+02 0.0031 27.7 7.3 82 400-483 36-134 (178)
232 PRK09271 flavodoxin; Provision 35.4 53 0.0011 30.0 4.2 37 85-126 1-37 (160)
233 cd02040 NifH NifH gene encodes 35.2 35 0.00077 33.8 3.3 28 100-127 9-38 (270)
234 PLN02695 GDP-D-mannose-3',5'-e 34.9 40 0.00087 35.5 3.8 35 82-126 19-53 (370)
235 COG0300 DltE Short-chain dehyd 34.8 52 0.0011 33.0 4.3 36 84-128 5-40 (265)
236 TIGR03371 cellulose_yhjQ cellu 34.7 37 0.00081 33.1 3.3 38 85-128 1-40 (246)
237 COG1819 Glycosyl transferases, 34.5 32 0.0007 36.8 3.0 38 84-127 1-38 (406)
238 cd03129 GAT1_Peptidase_E_like 34.4 4.1E+02 0.0088 25.2 10.4 97 383-479 12-124 (210)
239 cd00027 BRCT Breast Cancer Sup 33.4 1.5E+02 0.0033 21.5 6.0 64 401-476 2-65 (72)
240 PRK07308 flavodoxin; Validated 32.5 53 0.0011 29.3 3.7 36 84-126 3-38 (146)
241 PRK06932 glycerate dehydrogena 31.9 1.7E+02 0.0037 30.1 7.7 45 439-483 191-240 (314)
242 PRK13869 plasmid-partitioning 31.8 57 0.0012 34.9 4.3 39 83-127 119-159 (405)
243 PRK05693 short chain dehydroge 31.2 56 0.0012 32.4 4.0 34 85-127 1-34 (274)
244 TIGR01281 DPOR_bchL light-inde 31.0 45 0.00097 33.2 3.2 35 85-127 1-37 (268)
245 KOG3349 Predicted glycosyltran 31.0 1.5E+02 0.0032 27.1 5.9 96 373-478 6-109 (170)
246 PRK13234 nifH nitrogenase redu 30.2 56 0.0012 33.3 3.8 38 83-127 2-41 (295)
247 cd02032 Bchl_like This family 30.1 46 0.00099 33.1 3.1 35 85-127 1-37 (267)
248 COG4635 HemG Flavodoxin [Energ 30.0 66 0.0014 29.5 3.6 38 85-127 1-38 (175)
249 PRK06924 short chain dehydroge 30.0 60 0.0013 31.5 3.9 33 85-126 1-33 (251)
250 TIGR00036 dapB dihydrodipicoli 29.9 1.7E+02 0.0037 29.3 7.2 37 443-479 66-102 (266)
251 PF10649 DUF2478: Protein of u 29.8 1E+02 0.0022 28.4 4.9 39 441-479 89-133 (159)
252 CHL00175 minD septum-site dete 29.4 61 0.0013 32.5 3.9 37 85-127 15-53 (281)
253 TIGR01380 glut_syn glutathione 29.3 44 0.00096 34.3 2.9 40 85-127 1-40 (312)
254 PRK07454 short chain dehydroge 29.3 60 0.0013 31.4 3.7 36 83-127 4-39 (241)
255 PRK06756 flavodoxin; Provision 28.7 78 0.0017 28.3 4.1 37 85-126 2-38 (148)
256 PRK06101 short chain dehydroge 28.6 69 0.0015 31.0 4.0 34 85-127 1-34 (240)
257 PRK13232 nifH nitrogenase redu 28.2 51 0.0011 33.0 3.0 28 100-127 9-38 (273)
258 PRK06487 glycerate dehydrogena 28.1 1.9E+02 0.0042 29.7 7.3 45 439-483 191-240 (317)
259 PRK08305 spoVFB dipicolinate s 28.0 86 0.0019 29.9 4.3 36 84-127 5-42 (196)
260 PRK10840 transcriptional regul 27.9 5.1E+02 0.011 24.3 11.6 109 400-520 3-125 (216)
261 PRK06732 phosphopantothenate-- 27.8 68 0.0015 31.3 3.8 33 87-127 17-49 (229)
262 COG1192 Soj ATPases involved i 27.8 63 0.0014 31.9 3.6 38 85-128 2-42 (259)
263 TIGR03012 sulf_tusD_dsrE sulfu 27.6 87 0.0019 27.5 4.1 37 86-125 1-38 (127)
264 PF04413 Glycos_transf_N: 3-De 27.5 2.3E+02 0.0051 26.6 7.2 39 277-324 141-179 (186)
265 PLN00141 Tic62-NAD(P)-related 27.2 74 0.0016 31.2 4.0 33 84-126 17-49 (251)
266 COG1052 LdhA Lactate dehydroge 27.0 1.5E+02 0.0033 30.7 6.3 45 439-483 194-243 (324)
267 cd01425 RPS2 Ribosomal protein 26.9 3.5E+02 0.0076 25.6 8.4 32 444-476 126-157 (193)
268 PRK13185 chlL protochlorophyll 26.7 62 0.0013 32.2 3.4 28 100-127 10-39 (270)
269 PRK10538 malonic semialdehyde 26.6 75 0.0016 30.9 3.9 33 85-127 1-33 (248)
270 COG1922 WecG Teichoic acid bio 26.6 3.4E+02 0.0074 27.0 8.3 100 383-485 91-201 (253)
271 PF02441 Flavoprotein: Flavopr 26.6 72 0.0015 27.9 3.4 36 85-127 1-36 (129)
272 PRK13235 nifH nitrogenase redu 26.5 62 0.0013 32.4 3.3 28 100-127 9-38 (274)
273 PF10933 DUF2827: Protein of u 26.5 7.7E+02 0.017 25.9 14.7 157 374-551 193-362 (364)
274 TIGR00959 ffh signal recogniti 26.0 8.6E+02 0.019 26.3 12.7 93 446-551 241-339 (428)
275 PRK10360 DNA-binding transcrip 25.9 5E+02 0.011 23.5 10.8 107 402-520 3-117 (196)
276 KOG2884 26S proteasome regulat 25.8 6.2E+02 0.013 24.6 10.7 118 371-520 108-228 (259)
277 PRK08177 short chain dehydroge 25.7 81 0.0018 30.1 3.9 34 85-127 1-34 (225)
278 PRK05993 short chain dehydroge 25.7 88 0.0019 31.1 4.3 34 85-127 4-37 (277)
279 PRK13230 nitrogenase reductase 25.6 67 0.0015 32.2 3.4 28 100-127 9-38 (279)
280 PRK13243 glyoxylate reductase; 25.6 2.3E+02 0.005 29.4 7.4 45 439-483 198-247 (333)
281 PF04392 ABC_sub_bind: ABC tra 25.4 4.8E+02 0.01 26.2 9.7 91 385-476 116-218 (294)
282 TIGR00639 PurN phosphoribosylg 25.0 3.1E+02 0.0068 25.9 7.6 34 85-127 1-36 (190)
283 PF11997 DUF3492: Domain of un 25.0 30 0.00065 34.8 0.7 72 227-299 172-259 (268)
284 PRK15438 erythronate-4-phospha 24.9 2.9E+02 0.0063 29.3 8.0 83 399-483 115-214 (378)
285 PF10727 Rossmann-like: Rossma 24.7 41 0.0009 29.6 1.4 36 82-128 8-43 (127)
286 PRK15409 bifunctional glyoxyla 24.5 2.7E+02 0.0057 28.8 7.6 45 439-483 194-243 (323)
287 PRK05718 keto-hydroxyglutarate 24.3 5.7E+02 0.012 24.6 9.3 71 384-454 24-96 (212)
288 COG0569 TrkA K+ transport syst 24.3 46 0.00099 32.5 1.8 27 101-127 6-32 (225)
289 TIGR01968 minD_bact septum sit 24.3 74 0.0016 31.2 3.4 28 100-127 10-39 (261)
290 PRK13397 3-deoxy-7-phosphohept 24.2 6.6E+02 0.014 25.0 9.9 89 387-477 29-130 (250)
291 PF01656 CbiA: CobQ/CobB/MinD/ 24.0 69 0.0015 29.7 3.0 29 100-128 7-37 (195)
292 PRK06180 short chain dehydroge 24.0 99 0.0021 30.7 4.3 34 85-127 4-37 (277)
293 PRK13932 stationary phase surv 23.7 79 0.0017 31.5 3.3 39 83-129 4-42 (257)
294 PRK12921 2-dehydropantoate 2-r 23.6 82 0.0018 31.9 3.6 31 85-126 1-31 (305)
295 PF00201 UDPGT: UDP-glucoronos 23.6 25 0.00054 38.5 -0.2 29 100-128 9-37 (500)
296 PHA02519 plasmid partition pro 23.6 80 0.0017 33.6 3.6 37 84-126 105-143 (387)
297 TIGR01969 minD_arch cell divis 23.6 75 0.0016 30.9 3.3 28 100-127 9-38 (251)
298 PRK05653 fabG 3-ketoacyl-(acyl 23.6 98 0.0021 29.6 4.1 25 100-127 14-38 (246)
299 PRK05246 glutathione synthetas 23.5 63 0.0014 33.2 2.8 40 85-127 2-41 (316)
300 PF06506 PrpR_N: Propionate ca 23.5 2.6E+02 0.0057 25.8 6.7 79 387-473 64-147 (176)
301 PLN02928 oxidoreductase family 23.5 2.6E+02 0.0056 29.3 7.3 46 438-483 219-269 (347)
302 PRK12827 short chain dehydroge 23.2 95 0.0021 29.9 3.9 33 84-126 6-38 (249)
303 PRK10675 UDP-galactose-4-epime 23.2 88 0.0019 32.0 3.8 32 85-126 1-32 (338)
304 PLN02572 UDP-sulfoquinovose sy 23.0 1.4E+02 0.003 32.4 5.4 33 83-125 46-78 (442)
305 PF00185 OTCace: Aspartate/orn 23.0 3.5E+02 0.0075 24.6 7.3 75 372-455 3-83 (158)
306 TIGR03018 pepcterm_TyrKin exop 22.9 94 0.002 29.6 3.7 38 84-127 34-74 (207)
307 PF06057 VirJ: Bacterial virul 22.8 85 0.0018 29.8 3.2 34 87-127 5-38 (192)
308 COG1830 FbaB DhnA-type fructos 22.7 3.5E+02 0.0075 27.1 7.5 118 373-520 116-258 (265)
309 PRK07574 formate dehydrogenase 22.6 2.5E+02 0.0055 29.8 7.1 45 439-483 242-291 (385)
310 PRK12825 fabG 3-ketoacyl-(acyl 22.4 1.1E+02 0.0025 29.2 4.3 33 85-127 7-39 (249)
311 PF01408 GFO_IDH_MocA: Oxidore 22.4 3.8E+02 0.0083 22.4 7.2 77 389-476 15-93 (120)
312 PF03435 Saccharop_dh: Sacchar 22.3 2.1E+02 0.0046 30.1 6.6 111 399-520 21-141 (386)
313 PLN02306 hydroxypyruvate reduc 22.3 1.8E+02 0.004 30.9 6.0 46 438-483 229-279 (386)
314 PRK05568 flavodoxin; Provision 22.2 1.2E+02 0.0025 26.8 3.9 36 85-127 4-39 (142)
315 TIGR01754 flav_RNR ribonucleot 22.1 1.1E+02 0.0024 27.1 3.7 34 85-123 1-34 (140)
316 PRK08105 flavodoxin; Provision 22.1 1E+02 0.0022 27.8 3.6 27 100-126 12-38 (149)
317 PF09140 MipZ: ATPase MipZ; I 21.9 85 0.0018 31.2 3.1 37 86-128 1-39 (261)
318 TIGR00087 surE 5'/3'-nucleotid 21.9 88 0.0019 31.0 3.3 37 85-129 1-37 (244)
319 PRK09004 FMN-binding protein M 21.8 1.1E+02 0.0023 27.6 3.6 26 100-125 12-37 (146)
320 PRK05708 2-dehydropantoate 2-r 21.7 87 0.0019 32.0 3.3 33 84-127 2-34 (305)
321 COG1090 Predicted nucleoside-d 21.6 58 0.0013 32.8 1.9 30 100-129 4-33 (297)
322 cd05565 PTS_IIB_lactose PTS_II 21.6 3.9E+02 0.0084 22.4 6.6 73 403-476 4-79 (99)
323 PRK06522 2-dehydropantoate 2-r 21.5 1E+02 0.0022 31.1 3.8 32 85-127 1-32 (304)
324 PRK09739 hypothetical protein; 21.3 1.5E+02 0.0033 28.0 4.8 41 84-127 3-43 (199)
325 PRK07023 short chain dehydroge 21.2 1.1E+02 0.0024 29.5 3.9 25 100-127 10-34 (243)
326 PRK06179 short chain dehydroge 21.1 1.2E+02 0.0027 29.7 4.3 33 86-127 5-37 (270)
327 PLN02166 dTDP-glucose 4,6-dehy 20.9 91 0.002 33.7 3.4 34 83-126 119-152 (436)
328 PRK05884 short chain dehydroge 20.9 1.2E+02 0.0027 29.0 4.1 33 85-127 1-33 (223)
329 cd02037 MRP-like MRP (Multiple 20.9 81 0.0017 28.8 2.7 28 100-127 8-37 (169)
330 COG4088 Predicted nucleotide k 20.7 71 0.0015 30.9 2.2 39 85-128 1-39 (261)
331 PLN02778 3,5-epimerase/4-reduc 20.6 1E+02 0.0022 31.3 3.6 31 83-123 8-38 (298)
332 TIGR00288 conserved hypothetic 20.5 3.5E+02 0.0077 24.9 6.6 65 384-452 89-155 (160)
333 COG1553 DsrE Uncharacterized c 20.4 1.7E+02 0.0036 25.7 4.2 39 85-126 1-40 (126)
334 PRK15469 ghrA bifunctional gly 20.3 3.1E+02 0.0068 28.1 7.1 46 438-483 183-233 (312)
335 PRK05723 flavodoxin; Provision 20.3 1.3E+02 0.0027 27.4 3.7 36 85-125 1-36 (151)
336 PRK13396 3-deoxy-7-phosphohept 20.2 1E+03 0.022 25.0 11.0 104 371-477 100-216 (352)
337 PRK08267 short chain dehydroge 20.1 1.2E+02 0.0026 29.6 4.0 34 85-127 1-34 (260)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.2e-62 Score=543.33 Aligned_cols=440 Identities=35% Similarity=0.561 Sum_probs=368.7
Q ss_pred CCCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCC-----cEEEEEEeCCeEEEEEEEE
Q 008028 82 QQGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDT-----SVLAEVKVGDSIETVRFFH 156 (580)
Q Consensus 82 ~~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 156 (580)
.++|||+||+.|+.|+.|+||+|++++.|+++|+++||+|.||+|.|+.....+.. ...+...+++....+++|.
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 46799999999999999999999999999999999999999999999866522111 1233333444455678999
Q ss_pred EEecCeeEEEecC--c-cchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEE
Q 008028 157 CYKRGVDRVFVDH--P-VFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFI 233 (580)
Q Consensus 157 ~~~~gv~~~~l~~--~-~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih 233 (580)
...+||++|+++. + .|+.+ ..+|| +.++..||.+||++++++++.++. +|| |||
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~----------~PD-IIH 615 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR------AQYYG------EHDDFKRFSYFSRAALELLYQSGK----------KPD-IIH 615 (977)
T ss_pred EEECCeeEEEEecCCchhccCC------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC----------CCC-EEE
Confidence 8999999999985 3 25544 47886 578999999999999999987653 599 999
Q ss_pred ecCCccchHHHHHHHhhhccCccccceE-EEcCCCC-----C----------------C-----CCCccchHHHHHHhcC
Q 008028 234 GNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYD-----K----------------P-----VKGRKINWMKAGILES 286 (580)
Q Consensus 234 ~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~-----~----------------~-----~~~~~~~~~~~~~~~a 286 (580)
+||||+++++.++...+..+++ ..+++ +|+|... + + .....+|+++.++..|
T Consensus 616 ~HDW~TaLV~pll~~~y~~~~~-~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~A 694 (977)
T PLN02939 616 CHDWQTAFVAPLYWDLYAPKGF-NSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYS 694 (977)
T ss_pred ECCccHHHHHHHHHHHHhhccC-CCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhC
Confidence 9999999985554444444443 44555 8877221 0 0 0234578899999999
Q ss_pred ceeEeeCHHHHHHHHccccCCcchhhhhh--cCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcC
Q 008028 287 DRVLTVSPHYAKELISGEEKGVELDNIIR--KTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLG 364 (580)
Q Consensus 287 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 364 (580)
|.|+|||+.+++++.. ..|..++.+++ ..++.+|+||||.+.|+|.++++|+.+|+..++ ..|..++..+++++|
T Consensus 695 D~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aLRkelG 771 (977)
T PLN02939 695 NIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAALRKQLG 771 (977)
T ss_pred CeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHHHHHhC
Confidence 9999999999999986 34555555543 469999999999999999999999999999997 689999999999999
Q ss_pred CCCC-CCCcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCC-hhhHHHHHHHHHHCC--CCeeEeccCChHHHH
Q 008028 365 LPVD-RNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGK-KPMEQQIEQLEIICP--EKARGITKFSTPLAH 440 (580)
Q Consensus 365 lp~~-~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~-~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~ 440 (580)
++.+ ++.|+|+|+||+.++||++.+++|+.++.+.+++|+|+|+|+ ..+++.++++..+++ ++|.+.+.++....+
T Consensus 772 L~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah 851 (977)
T PLN02939 772 LSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSH 851 (977)
T ss_pred CCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHH
Confidence 9854 577999999999999999999999998877789999999996 456788888888775 479999999988888
Q ss_pred HHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEec---------CceeEEEeecccccccCCcccHHHH
Q 008028 441 KIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKE---------GITGFQMRSFHVECDRVDLADVAAI 511 (580)
Q Consensus 441 ~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~---------~~~G~~~~~~~~~~~~v~~~d~~~l 511 (580)
.+|++||++|+||++|+||++++|||+||+|||++++||+.|++.+ +.+||++ ++.|++++
T Consensus 852 ~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~D~eaL 921 (977)
T PLN02939 852 SIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTPDEQGL 921 (977)
T ss_pred HHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCCCHHHH
Confidence 9999999999999999999999999999999999999999999875 5799998 99999999
Q ss_pred HHHHHHHHHhc--ChhHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhc
Q 008028 512 AKHVNRAVATY--GTPALKEMIQNCMALDLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 512 a~~l~~ll~~~--~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 558 (580)
+++|.+++..+ +++.|.+|+++++.++|||+.++++|+++|.+++..
T Consensus 922 a~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 922 NSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 99999998744 367899999999999999999999999999998753
No 2
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=4.7e-62 Score=529.62 Aligned_cols=445 Identities=27% Similarity=0.532 Sum_probs=375.2
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccc-cCC-c--EEEE--EEeCCeEEEEEEEEE
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDA-WDT-S--VLAE--VKVGDSIETVRFFHC 157 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~-~~~-~--~~~~--~~~~~~~~~~~~~~~ 157 (580)
.|||+||++|+.|+.|+||++++++.|+++|+++||+|.||.|.|+...+. +.. . .... +..+......+..+.
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 499999999999999999999999999999999999999999999887653 111 1 1222 233333333333333
Q ss_pred Eec--CeeEEEecCccchhhhccCCCCcccCCC-CCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEe
Q 008028 158 YKR--GVDRVFVDHPVFLEKVWGKTGSKIYGPK-AGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIG 234 (580)
Q Consensus 158 ~~~--gv~~~~l~~~~~~~~~~~~~~~~~y~~~-~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~ 234 (580)
..+ +|++|+++++.|+.+ ..+|+.. .|.||.|+..||.+||.+++++++.++. +|| |||+
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~----------~pD-iiH~ 147 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKR------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW----------KPD-IIHC 147 (489)
T ss_pred cccCCCceEEEEeCHHHcCC------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEe
Confidence 333 699999999999886 5799876 6789999999999999999999987643 599 8999
Q ss_pred cCCccchHHHHHHHhhhccCccccceE-EEcCCCCCC---------------------CCCccchHHHHHHhcCceeEee
Q 008028 235 NDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKP---------------------VKGRKINWMKAGILESDRVLTV 292 (580)
Q Consensus 235 ~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~---------------------~~~~~~~~~~~~~~~ad~vi~v 292 (580)
||||++++|.+++..+.....+...++ +|+|+.... .....+++++.++..||.|++|
T Consensus 148 hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitV 227 (489)
T PRK14098 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTT 227 (489)
T ss_pred cCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceee
Confidence 999999999999877654444455666 888853210 0113468899999999999999
Q ss_pred CHHHHHHHHccccCCcchhhhhh--cCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCC
Q 008028 293 SPHYAKELISGEEKGVELDNIIR--KTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRN 370 (580)
Q Consensus 293 S~~~~~~l~~~~~~g~~~~~~~~--~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~ 370 (580)
|+.+++++......|..++.+++ ..++.+|+||||.+.|+|.+++.+..+|+..++ ..|..++..+++++|++.+++
T Consensus 228 S~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~~~lgl~~~~~ 306 (489)
T PRK14098 228 SPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALLEEVGLPFDEE 306 (489)
T ss_pred CHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHHHHhCCCCccC
Confidence 99999999863233444444443 358999999999999999988888899998876 677888999999999998888
Q ss_pred CcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEE
Q 008028 371 IPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFML 450 (580)
Q Consensus 371 ~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l 450 (580)
.++|+|+||+.++||++.|++|+.++.+.+++|+|+|+|+..+++.++++..++++++.+.+.++..+++.++++||+++
T Consensus 307 ~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi~l 386 (489)
T PRK14098 307 TPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDMLL 386 (489)
T ss_pred CCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCEEE
Confidence 99999999999999999999999999877999999999987788899999998888899999999999999999999999
Q ss_pred ecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEec----CceeEEEeecccccccCCcccHHHHHHHHHHHHHhcC-hh
Q 008028 451 VPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKE----GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYG-TP 525 (580)
Q Consensus 451 ~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~----~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~-~~ 525 (580)
+||++|+||++++|||+||+|+|++++||+.|++.+ +.+|+++ ++.|+++++++|.++++.+. ++
T Consensus 387 ~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~~~l~~~~~~~ 456 (489)
T PRK14098 387 MPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLGEALALYHDEE 456 (489)
T ss_pred eCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHHHHHHHHcCHH
Confidence 999999999999999999999999999999999875 6799998 99999999999999876543 57
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 008028 526 ALKEMIQNCMALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 526 ~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
.|.+++++++.++|||++++++|+++|++++
T Consensus 457 ~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 457 RWEELVLEAMERDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Confidence 8889999999999999999999999999886
No 3
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.6e-61 Score=525.00 Aligned_cols=445 Identities=34% Similarity=0.562 Sum_probs=366.7
Q ss_pred CCCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCc-EEEEEEeCCeEEEEEEEEEEec
Q 008028 82 QQGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTS-VLAEVKVGDSIETVRFFHCYKR 160 (580)
Q Consensus 82 ~~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (580)
|+.|||+||++|+.|+.|+||++++++.|+++|+++||+|.||.|.|+...+..... ....+.... ...+++++...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLF-GGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeC-CceEEEEEEEeC
Confidence 357999999999999999999999999999999999999999999998875443222 122222110 114678888889
Q ss_pred CeeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccc
Q 008028 161 GVDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTA 240 (580)
Q Consensus 161 gv~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~ 240 (580)
||++|+++++.++.+. +.+|+...+.+|.|+..||.+||++++++++.+... ++|| |||+||||++
T Consensus 80 ~v~~~~~~~~~~f~r~-----~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~--------~~pD-IiH~Hdw~~~ 145 (485)
T PRK14099 80 GLDLFVLDAPHLYDRP-----GNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPG--------FVPD-IVHAHDWQAG 145 (485)
T ss_pred CceEEEEeChHhhCCC-----CCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccC--------CCCC-EEEECCcHHH
Confidence 9999999999988751 248988778899999999999999999988764211 3699 9999999999
Q ss_pred hHHHHHHHhhhccCccccceE-EEcCCCCCC-----------------------CCCccchHHHHHHhcCceeEeeCHHH
Q 008028 241 LLPCYLKFMYQSKGIHKNAKR-LCRPRYDKP-----------------------VKGRKINWMKAGILESDRVLTVSPHY 296 (580)
Q Consensus 241 ~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~-----------------------~~~~~~~~~~~~~~~ad~vi~vS~~~ 296 (580)
+++.+++... . ...++ +|+|..... .....+++++.+++.||.|++||+.+
T Consensus 146 l~~~~l~~~~----~-~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~ 220 (485)
T PRK14099 146 LAPAYLHYSG----R-PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTY 220 (485)
T ss_pred HHHHHHHhCC----C-CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhH
Confidence 9999886421 1 12344 888843111 01123467899999999999999999
Q ss_pred HHHHHccccCCcchhhhhh--cCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 297 AKELISGEEKGVELDNIIR--KTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 297 ~~~l~~~~~~g~~~~~~~~--~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
++++... ..|+..+.+++ ..++.+|+||||.+.|+|.+++.+..+|+..++ ..|..++..+++++|++.+++.++|
T Consensus 221 a~ei~~~-~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~li 298 (485)
T PRK14099 221 ALEIQGP-EAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLDPDPDALLL 298 (485)
T ss_pred HHHHhcc-cCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCCcccCCcEE
Confidence 9999852 23443333332 358999999999999999999999999998876 6788889999999999877778999
Q ss_pred EEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCC
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSR 454 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~ 454 (580)
+++||+.++||++.|++|++++.+.+++|+|+|+|...+++.++++..++++++..+..|+.++.+.++++||++++||+
T Consensus 299 ~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDifv~PS~ 378 (485)
T PRK14099 299 GVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSR 378 (485)
T ss_pred EEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCEEEECCc
Confidence 99999999999999999999987778999999999877888999998888777765667777777666689999999999
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCCcceeEecC---------ceeEEEeecccccccCCcccHHHHHHHHHHHHHhc-Ch
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEG---------ITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATY-GT 524 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~---------~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~-~~ 524 (580)
+|+||++++|||+||+|+|++++||+.|++.++ .+|+++ ++.|+++++++|.+++..+ ++
T Consensus 379 ~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~a~~l~~d~ 448 (485)
T PRK14099 379 FEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRKTAALFADP 448 (485)
T ss_pred cCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHHHHHHhcCH
Confidence 999999999999999999999999999999875 689998 9999999999999854322 26
Q ss_pred hHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhc
Q 008028 525 PALKEMIQNCMALDLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 525 ~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 558 (580)
+.+.+|+++++.++|||++++++|+++|++++..
T Consensus 449 ~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 449 VAWRRLQRNGMTTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Confidence 7889999999999999999999999999998753
No 4
>PLN02316 synthase/transferase
Probab=100.00 E-value=3.1e-59 Score=527.62 Aligned_cols=433 Identities=32% Similarity=0.536 Sum_probs=360.5
Q ss_pred ccccCCCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEE
Q 008028 78 KIICQQGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHC 157 (580)
Q Consensus 78 ~~~~~~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (580)
.....++|||+||+.|+.|+.++||+|++++.|+++|+++||+|.||+|.|+...............+......+++++.
T Consensus 581 ~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 660 (1036)
T PLN02316 581 GIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFG 660 (1036)
T ss_pred CCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEE
Confidence 34445679999999999999999999999999999999999999999999986533222222211222222345778888
Q ss_pred EecCeeEEEecCcc-chhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecC
Q 008028 158 YKRGVDRVFVDHPV-FLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGND 236 (580)
Q Consensus 158 ~~~gv~~~~l~~~~-~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~ 236 (580)
..+||++|+++++. ++.+ ..+|+ +.++..+|.+||.+++++++.++. +|| |||+||
T Consensus 661 ~~~GV~vyfl~~~~~~F~r------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~----------~PD-IIHaHD 717 (1036)
T PLN02316 661 KVEGLSVYFLEPQNGMFWA------GCVYG------CRNDGERFGFFCHAALEFLLQSGF----------HPD-IIHCHD 717 (1036)
T ss_pred EECCcEEEEEeccccccCC------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECC
Confidence 89999999999763 4433 36775 678899999999999999987653 599 999999
Q ss_pred CccchHHHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhh
Q 008028 237 WHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIR 315 (580)
Q Consensus 237 ~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~ 315 (580)
|++++++.+++..+...++ ...++ +|+|+... ..+.++.++..||.|++||+.+++++... .++.. +
T Consensus 718 W~talva~llk~~~~~~~~-~~~p~V~TiHnl~~-----~~n~lk~~l~~AD~ViTVS~tya~EI~~~--~~l~~----~ 785 (1036)
T PLN02316 718 WSSAPVAWLFKDHYAHYGL-SKARVVFTIHNLEF-----GANHIGKAMAYADKATTVSPTYSREVSGN--SAIAP----H 785 (1036)
T ss_pred ChHHHHHHHHHHhhhhhcc-CCCCEEEEeCCccc-----chhHHHHHHHHCCEEEeCCHHHHHHHHhc--cCccc----c
Confidence 9999999999887655443 44566 88886431 23567889999999999999999999862 12211 1
Q ss_pred cCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhh
Q 008028 316 KTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPK 395 (580)
Q Consensus 316 ~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~ 395 (580)
..++.+|+||||.+.|+|.++++++.+|+..++...|..++..+|+++|++. ++.|+|+|+|||.++||+++|++|+.+
T Consensus 786 ~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ 864 (1036)
T PLN02316 786 LYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQ-ADLPLVGIITRLTHQKGIHLIKHAIWR 864 (1036)
T ss_pred cCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCc-ccCeEEEEEeccccccCHHHHHHHHHH
Confidence 2389999999999999999999999999988877788888999999999983 467899999999999999999999999
Q ss_pred hcCCCeEEEEEecCC-hhhHHHHHHHHHH----CCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCC
Q 008028 396 FMGGNVQIVVLGTGK-KPMEQQIEQLEII----CPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGT 470 (580)
Q Consensus 396 l~~~~v~lii~G~g~-~~~~~~i~~l~~~----~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~ 470 (580)
+.++++||+|+|+|+ ..+++.++++..+ +++++.+.+.|+..+.+.+|++||++|+||++|+||+++||||+||+
T Consensus 865 ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~Gt 944 (1036)
T PLN02316 865 TLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGS 944 (1036)
T ss_pred HhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCC
Confidence 877789999999985 4466777777774 45678888889888888899999999999999999999999999999
Q ss_pred ceEEcCCCCcceeEecC-------------ceeEEEeecccccccCCcccHHHHHHHHHHHHHhc-C-hhHHHHHHHHHH
Q 008028 471 VPIVASTGGLFDTVKEG-------------ITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATY-G-TPALKEMIQNCM 535 (580)
Q Consensus 471 PvI~s~~gg~~e~i~~~-------------~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~-~-~~~~~~~~~~~~ 535 (580)
|+|++++||+.|++.++ .+||++ ++.|+++++.+|.+++..| . +..+.++++++|
T Consensus 945 ppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m 1014 (1036)
T PLN02316 945 IPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DGADAAGVDYALNRAISAWYDGRDWFNSLCKRVM 1014 (1036)
T ss_pred CeEEEcCCCcHhhccccccccccccccccCCceEEe----------CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 99999999999999874 689998 9999999999999999975 2 344688899999
Q ss_pred HhcCCchHHHHHHHHHHHHHH
Q 008028 536 ALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 536 ~~~fs~~~~a~~~~~~~~~l~ 556 (580)
.++|||++++++|+++|+++.
T Consensus 1015 ~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1015 EQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred HhhCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999874
No 5
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=4.2e-59 Score=508.19 Aligned_cols=435 Identities=43% Similarity=0.722 Sum_probs=371.4
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCC----cEEEEEEeCCeEEEEEEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDT----SVLAEVKVGDSIETVRFFHCYKR 160 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 160 (580)
|||++|+.|+.|+.++||+|++++.|+++|+++||+|+|++|.|+...+.+.. .....+..+++...+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 89999999999999999999999999999999999999999999877665432 23445566777888999999999
Q ss_pred CeeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccc
Q 008028 161 GVDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTA 240 (580)
Q Consensus 161 gv~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~ 240 (580)
|+++|+++++.++.+. +.+|++ ||.++..++.+|+++++++++.++. +|| |||+|||+++
T Consensus 81 ~v~~~~i~~~~~~~r~-----~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~----------~~D-iiH~hdw~~~ 140 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRP-----GGIYGD----DYPDNAERFAFFSRAAAELLSGLGW----------QPD-VVHAHDWHTA 140 (473)
T ss_pred CceEEEEECHHHcCCC-----CCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCcHHH
Confidence 9999999999876641 258875 7899999999999999999887643 599 9999999999
Q ss_pred hHHHHHHHhhhccCccccceE-EEcCCCCCC-C----------------------CCccchHHHHHHhcCceeEeeCHHH
Q 008028 241 LLPCYLKFMYQSKGIHKNAKR-LCRPRYDKP-V----------------------KGRKINWMKAGILESDRVLTVSPHY 296 (580)
Q Consensus 241 ~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~-~----------------------~~~~~~~~~~~~~~ad~vi~vS~~~ 296 (580)
+++.+++..++.. ..++ +|+|+.... . ....+++++.+++.||.+++||+.+
T Consensus 141 ~~~~~l~~~~~~~----~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~ 216 (473)
T TIGR02095 141 LVPALLKAVYRPN----PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTY 216 (473)
T ss_pred HHHHHHHhhccCC----CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhH
Confidence 9999988765421 2344 777743210 0 0113567889999999999999999
Q ss_pred HHHHHccccCCcchhhhh--hcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 297 AKELISGEEKGVELDNII--RKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 297 ~~~l~~~~~~g~~~~~~~--~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
++++... ..|...+.++ +..++.+|+||+|.+.|+|..++.+..+|+..++ ..+..++..+++++|++.+++.++|
T Consensus 217 ~~ei~~~-~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~~i 294 (473)
T TIGR02095 217 AREILTP-EFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLPVDDDVPLF 294 (473)
T ss_pred HHHhcCC-cCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCCccCCCCEE
Confidence 9999752 2344433333 2458999999999999999988888888887765 4667778899999999876788999
Q ss_pred EEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCC
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSR 454 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~ 454 (580)
+|+||+.++||++.+++|++++.+.+++|+|+|+|.+.+++.++++..+++.++.+...++.++++.++++||++++||+
T Consensus 295 ~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~ 374 (473)
T TIGR02095 295 GVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSR 374 (473)
T ss_pred EEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCCC
Confidence 99999999999999999999998778999999999877888999999888888989999999988899999999999999
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCCcceeEecC------ceeEEEeecccccccCCcccHHHHHHHHHHHHHhc--ChhH
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEG------ITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATY--GTPA 526 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~------~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~--~~~~ 526 (580)
+|+||++++|||+||+|+|++++||+.|++.++ .+|+++ ++.|+++++++|.++++.+ +++.
T Consensus 375 ~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~~~~~~~~~ 444 (473)
T TIGR02095 375 FEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALRLYRQDPSL 444 (473)
T ss_pred cCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999999999998 899998 9999999999999998843 2577
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 008028 527 LKEMIQNCMALDLSWKEPARLWEKMLLSM 555 (580)
Q Consensus 527 ~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 555 (580)
+.+|+++++.++|||++++++|+++|+++
T Consensus 445 ~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 445 WEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 89999999989999999999999999863
No 6
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.4e-57 Score=494.58 Aligned_cols=429 Identities=38% Similarity=0.649 Sum_probs=355.8
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCC-cEEEEEEeCCeEEEEEEEEE--EecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDT-SVLAEVKVGDSIETVRFFHC--YKRG 161 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~g 161 (580)
|||+||+.|++|+.++||+|++++.|+++|+++||+|+|++|.|+...+.... ....++ ...+++.. ..+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 89999999999999999999999999999999999999999999866543211 112221 12444443 4589
Q ss_pred eeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccch
Q 008028 162 VDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTAL 241 (580)
Q Consensus 162 v~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~ 241 (580)
|++|+++++.++.+ ..+|+ +.++..||.+|+.+++++++.++. +|| |||+|+|++++
T Consensus 75 v~v~~v~~~~~~~~------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~----------~pD-iiH~h~w~~~~ 131 (466)
T PRK00654 75 VPVYLIDAPHLFDR------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP----------RPD-IVHAHDWHTGL 131 (466)
T ss_pred ceEEEEeCHHHcCC------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC----------CCc-eEEECCcHHHH
Confidence 99999999887765 46785 678899999999999999987653 499 99999999999
Q ss_pred HHHHHHHhhhccCccccceE-EEcCCCCCC--C---------------------CCccchHHHHHHhcCceeEeeCHHHH
Q 008028 242 LPCYLKFMYQSKGIHKNAKR-LCRPRYDKP--V---------------------KGRKINWMKAGILESDRVLTVSPHYA 297 (580)
Q Consensus 242 l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~--~---------------------~~~~~~~~~~~~~~ad~vi~vS~~~~ 297 (580)
++.+++..+ ..+ +...++ +|+|+.... . ....+++++.+++.||.|++||+.++
T Consensus 132 ~~~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~ 209 (466)
T PRK00654 132 IPALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYA 209 (466)
T ss_pred HHHHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHH
Confidence 999988665 223 223455 888854211 0 01236788889999999999999999
Q ss_pred HHHHccccCCcchhhhh--hcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEE
Q 008028 298 KELISGEEKGVELDNII--RKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIG 375 (580)
Q Consensus 298 ~~l~~~~~~g~~~~~~~--~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~ 375 (580)
+++.... .|..++..+ +..++.+|+||||.+.|+|..++.+..+|+..++ ..+..++..+++++|++ +++.++|+
T Consensus 210 ~ei~~~~-~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~-~~~~~~i~ 286 (466)
T PRK00654 210 REITTPE-FGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLP-DDDAPLFA 286 (466)
T ss_pred HHhcccc-CCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCC-CCCCcEEE
Confidence 9987521 222222222 2458999999999999999988888889988776 57778889999999997 34678999
Q ss_pred EEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCC
Q 008028 376 FIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRF 455 (580)
Q Consensus 376 f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~ 455 (580)
|+||+.++||++.|++|++++.+++++|+|+|+|...+++.++++..+++.++.+...++.++.+.++++||++++||++
T Consensus 287 ~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~ 366 (466)
T PRK00654 287 MVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRF 366 (466)
T ss_pred EeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEEeCCCC
Confidence 99999999999999999999977799999999998778889999999888877777778888888899999999999999
Q ss_pred CCccHHHHHHHHcCCceEEcCCCCcceeEecC------ceeEEEeecccccccCCcccHHHHHHHHHHHHHhcC-hhHHH
Q 008028 456 EPCGLIQLHAMRYGTVPIVASTGGLFDTVKEG------ITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYG-TPALK 528 (580)
Q Consensus 456 E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~------~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~-~~~~~ 528 (580)
|+||++++|||+||+|+|++++||+.|++.++ .+|+++ ++.|+++++++|.++++.+. ++.+.
T Consensus 367 E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~~~~~~~~~ 436 (466)
T PRK00654 367 EPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALELYRQPPLWR 436 (466)
T ss_pred CCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999999999999999999999999999988 899998 99999999999999988543 46688
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHh
Q 008028 529 EMIQNCMALDLSWKEPARLWEKMLLSMEV 557 (580)
Q Consensus 529 ~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 557 (580)
+|++++++++|||++++++|+++|++++.
T Consensus 437 ~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 437 ALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 99999988999999999999999998863
No 7
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=7.1e-56 Score=483.57 Aligned_cols=437 Identities=43% Similarity=0.707 Sum_probs=370.9
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEE----EEEEeCCeEEEEEEEEEEecC
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVL----AEVKVGDSIETVRFFHCYKRG 161 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (580)
||++||.|+.|+.++||+|+++.+|+++|+++||+|+|++|.|+.....+..... +.+..++....+++++...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 6999999999999999999999999999999999999999999877765544332 234456677788999999999
Q ss_pred eeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccch
Q 008028 162 VDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTAL 241 (580)
Q Consensus 162 v~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~ 241 (580)
|++|+++++.++.+ ..+| +..+.+|.++..++.+|+++++++++.++. +|| |||+||||+++
T Consensus 81 v~~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~----------~pD-viH~hd~~t~~ 142 (476)
T cd03791 81 VPVYFLDNPDYFDR------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW----------KPD-IIHCHDWHTGL 142 (476)
T ss_pred ceEEEEcChHHcCC------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC----------CCc-EEEECchHHHH
Confidence 99999999988765 3444 445567889999999999999999987643 599 99999999999
Q ss_pred HHHHHHHhhhccCccccceE-EEcCCCCCC------------------------CCCccchHHHHHHhcCceeEeeCHHH
Q 008028 242 LPCYLKFMYQSKGIHKNAKR-LCRPRYDKP------------------------VKGRKINWMKAGILESDRVLTVSPHY 296 (580)
Q Consensus 242 l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~------------------------~~~~~~~~~~~~~~~ad~vi~vS~~~ 296 (580)
++.+++..+.. ..+...++ +++|+.... .....+++++.++..||.+++||+.+
T Consensus 143 ~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~ 221 (476)
T cd03791 143 VPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTY 221 (476)
T ss_pred HHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhH
Confidence 99998876543 22334556 887753211 01234578899999999999999999
Q ss_pred HHHHHccccCCcchhhhhh--cCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 297 AKELISGEEKGVELDNIIR--KTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 297 ~~~l~~~~~~g~~~~~~~~--~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
++++.+. ..|...+.+++ ..++.+|+||+|.+.|.|..++.+...|+...+ ..+..++..+++++|++.+++.++|
T Consensus 222 ~~~i~~~-~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~~~~~k~~l~~~~g~~~~~~~~~i 299 (476)
T cd03791 222 AREILTP-EFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDL-EGKAENKAALQEELGLPVDPDAPLF 299 (476)
T ss_pred HHHhCCC-CCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcccc-ccHHHHHHHHHHHcCCCcCCCCCEE
Confidence 9998752 12333333332 359999999999999999988888888876554 6778889999999999877788999
Q ss_pred EEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCC
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSR 454 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~ 454 (580)
+|+||+.++||++.++++++++.+.+++|+|+|+|...+++.++++..++++++.++..++..+.+.++++||++++||+
T Consensus 300 ~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~ 379 (476)
T cd03791 300 GFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSR 379 (476)
T ss_pred EEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCC
Confidence 99999999999999999999998777999999999877888999998887778988899998888899999999999999
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCCcceeEecCc------eeEEEeecccccccCCcccHHHHHHHHHHHHHhcC-hhHH
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGI------TGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYG-TPAL 527 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~------~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~-~~~~ 527 (580)
+|+||++++|||+||+|||++++||+.|++.++. +|+++ ++.|+++++++|.++++.+. ++.+
T Consensus 380 ~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~~~~~~~~ 449 (476)
T cd03791 380 FEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALALYRDPEAW 449 (476)
T ss_pred CCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHHHcCHHHH
Confidence 9999999999999999999999999999999988 99998 99999999999999998653 5789
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHH
Q 008028 528 KEMIQNCMALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 528 ~~~~~~~~~~~fs~~~~a~~~~~~~~ 553 (580)
.+|+++++++.|||+.++++|+++|+
T Consensus 450 ~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 450 RKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHhccCCChHHHHHHHHHHHh
Confidence 99999999999999999999999986
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=1.7e-56 Score=496.99 Aligned_cols=495 Identities=18% Similarity=0.241 Sum_probs=393.7
Q ss_pred ccccccccccccccHHHHHhhhhchhhhhhcccccCCCCCCCcccccCC------CceEEEEeecc-----cCccccccH
Q 008028 35 SMTHSGLRSLNTIDRLQMKSYAKAVVTKATKNEQQTPNNVPSKKIICQQ------GMNLVFVGAEV-----APWSKTGGL 103 (580)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~mkI~~vs~e~-----~P~~~~GG~ 103 (580)
.+.|||+++|+.+|+.++.+++.|..++.+.+.+...++.|+....|.. ...++|||+|| .|.| +||+
T Consensus 30 ~~~~np~~~l~~~~~~~l~~~~~d~~f~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~aYFs~E~gl~~~lpiY-sGGL 108 (778)
T cd04299 30 ETGHNPVLLLGEVSQERLEELAEDPEFLARYDRVLEDFDAYLEEPTWYQGRNDGEPLVAAYFSMEFGLHESLPIY-SGGL 108 (778)
T ss_pred HcCCChHHHHHhCCHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCccccccccCCCCeeEEeccccccCCCCCcc-CchH
Confidence 3579999999999999999999999999999999888888887777632 23455999995 5888 9999
Q ss_pred HHHhccchHHHHhCCCeEEEEEecCCc-----------------------------cccccCCcEEEEEEeCCeEEEEEE
Q 008028 104 GDVLGGLPPALAARGHRVMSVAPRYDQ-----------------------------YKDAWDTSVLAEVKVGDSIETVRF 154 (580)
Q Consensus 104 g~~~~~l~~aL~~~G~~V~vi~~~y~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 154 (580)
|++++++.++++++|.+++.|+..|++ ..+..+....+.+.++++...+++
T Consensus 109 G~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~~~~G~~~~v~v~l~g~~v~~rv 188 (778)
T cd04299 109 GILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVRDADGEPVRVSVELPGRTVYARV 188 (778)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEecCCCCeEEEEEeeCCCceEEEE
Confidence 999999999999999999999999861 011123356788889899999999
Q ss_pred EEEEecCeeEEEecCccchhhhccCCCC-cccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEE
Q 008028 155 FHCYKRGVDRVFVDHPVFLEKVWGKTGS-KIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFI 233 (580)
Q Consensus 155 ~~~~~~gv~~~~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih 233 (580)
|...+++|++|++|++.+.+..++|... .+||+ |...|+.|+.+|+++++++++.++. .|| |+|
T Consensus 189 w~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~----D~~~Rl~Qe~~Lg~agl~~Lr~lg~----------~pd-ViH 253 (778)
T cd04299 189 WKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG----DQETRIQQEILLGIGGVRALRALGI----------KPT-VYH 253 (778)
T ss_pred EEEEcCCCCEEEecCCccccchhhcccccCCCCC----cHHHHHHHHHHHHHHHHHHHHHhCC----------CCe-EEE
Confidence 9999999999999999987777777422 68986 5567788899999999999998865 389 999
Q ss_pred ecCCccchHHHH-HHHhhhccCccc-------cceE-EEcC-----C--CCC---------------C------------
Q 008028 234 GNDWHTALLPCY-LKFMYQSKGIHK-------NAKR-LCRP-----R--YDK---------------P------------ 270 (580)
Q Consensus 234 ~~~~~~~~l~~~-l~~~~~~~gi~~-------~~~~-~~l~-----~--~~~---------------~------------ 270 (580)
+||||+++++.+ ++.++...|+.. ..++ ||.| + ..+ .
T Consensus 254 ~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~~~~lg~e 333 (778)
T cd04299 254 MNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDRFLALGRE 333 (778)
T ss_pred eCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHHHhhhccc
Confidence 999999999995 444443222211 2334 7765 1 000 0
Q ss_pred C---CCccchHHHHHHhcCceeEeeCHHH---HHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcC-CCCcccccccc
Q 008028 271 V---KGRKINWMKAGILESDRVLTVSPHY---AKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWN-PSTDRYINVNY 343 (580)
Q Consensus 271 ~---~~~~~~~~~~~~~~ad~vi~vS~~~---~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~-~~~~~~l~~~~ 343 (580)
. ....++|++.+++.|+.+++||+-. ++++++..++|++.++. +|..|+||||...|. |..++.+ .+|
T Consensus 334 ~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~----~i~~ITNGVh~~~W~~P~~~~l~-~~~ 408 (778)
T cd04299 334 NPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEV----PIGHVTNGVHVPTWVAPEMRELY-DRY 408 (778)
T ss_pred cccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccC----ceeceeCCcchhhhcCHHHHHHH-HHh
Confidence 0 0235899999999999999999955 88888888888887543 899999999999999 5554433 555
Q ss_pred Cchh---------------------hhccchHHHHHHHHHc---------------------CCCCCCCCcEEEEEccCc
Q 008028 344 DATT---------------------VMNAKPLVKEALQSQL---------------------GLPVDRNIPLIGFIGRLE 381 (580)
Q Consensus 344 ~~~~---------------------~~~~~~~~~~~~~~~~---------------------glp~~~~~~~i~f~Grl~ 381 (580)
.+++ ....|..+|..+.+.. +.+.+++.++|+|++|+.
T Consensus 409 ~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa 488 (778)
T cd04299 409 LGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFA 488 (778)
T ss_pred cCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecch
Confidence 3222 2246666777665553 666789999999999999
Q ss_pred cccCHHHHHHHHhhhcC------CCeEEEEEecCC------hhhHHHHHHHHH--HCCCCeeEeccCChHHHHHHHhcCC
Q 008028 382 EQKGSDILAQAIPKFMG------GNVQIVVLGTGK------KPMEQQIEQLEI--ICPEKARGITKFSTPLAHKIIAGAD 447 (580)
Q Consensus 382 ~~Kg~~~ll~a~~~l~~------~~v~lii~G~g~------~~~~~~i~~l~~--~~~~~v~~~~~~~~~~~~~~~~~aD 447 (580)
+|||.++++++++++.+ .++||||+|++. +.+++.+.+++. +++++|+|+.+|+..+++.++++||
T Consensus 489 ~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG~D 568 (778)
T cd04299 489 TYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQGVD 568 (778)
T ss_pred hhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhhhh
Confidence 99999999999988844 589999999976 788899999998 7788999999999999999999999
Q ss_pred EEEecCC--CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEee---cccccccCCcccHHHHHHHHHH-HH-H
Q 008028 448 FMLVPSR--FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRS---FHVECDRVDLADVAAIAKHVNR-AV-A 520 (580)
Q Consensus 448 i~l~ps~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~---~~~~~~~v~~~d~~~la~~l~~-ll-~ 520 (580)
+|++||+ +|+||+++|.||.+|. +..|..+|||....++.|||.||. +.++ +.-|..|.++|-+.|.+ ++ .
T Consensus 569 vwLn~prrp~EAsGTSgMKA~~NG~-LnlSvlDGww~E~~~g~nGwaig~~~~~~~~-~~~d~~da~~Ly~~Le~~i~p~ 646 (778)
T cd04299 569 VWLNTPRRPLEASGTSGMKAALNGG-LNLSVLDGWWDEGYDGENGWAIGDGDEYEDD-EYQDAEEAEALYDLLENEVIPL 646 (778)
T ss_pred hcccCCCCCCCCCccchHHHHHcCC-eeeecccCccccccCCCCceEeCCCccccCh-hhcchhhHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999999 888888888888889999999983 3321 11123445555555533 22 2
Q ss_pred hcC------hhHHHHHHHHHHHh---cCCchHHHHHHHHHH
Q 008028 521 TYG------TPALKEMIQNCMAL---DLSWKEPARLWEKML 552 (580)
Q Consensus 521 ~~~------~~~~~~~~~~~~~~---~fs~~~~a~~~~~~~ 552 (580)
.|+ +..|.+|++++|++ +|||.+|+++|.+.|
T Consensus 647 yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 647 FYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred HhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 344 45799999999998 999999999998754
No 9
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-53 Score=451.35 Aligned_cols=441 Identities=38% Similarity=0.605 Sum_probs=373.0
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCc----EEEEEEeCCeEEEEEEEEEEe-
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTS----VLAEVKVGDSIETVRFFHCYK- 159 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~- 159 (580)
|||++++.|+.|..|+||++++++.|+++|++.|++|.|+.|.|+..++.|... ....+..+.+.......+...
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999999777777664 223333444443433333332
Q ss_pred cCeeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCcc
Q 008028 160 RGVDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHT 239 (580)
Q Consensus 160 ~gv~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~ 239 (580)
++++.++++.+.++++. +...| ++.++..||..|+.++++.+....+. ..|| |+|+||||+
T Consensus 81 ~~v~~~lid~~~~f~r~----~~~~~------~~~d~~~Rf~~F~~a~~~~~~~~~~~--------~~pD-IvH~hDWqt 141 (487)
T COG0297 81 GGVDLYLIDNPALFKRP----DSTLY------GYYDNAERFAFFSLAAAELAPLGLIS--------WLPD-IVHAHDWQT 141 (487)
T ss_pred CCCcEEEecChhhcCcc----ccccC------CCCcHHHHHHHHHHHHHHHhhhcCCC--------CCCC-EEEeecHHH
Confidence 34999999988777641 12334 58999999999999999988665431 2599 999999999
Q ss_pred chHHHHHHHhhhccCccccceEEEcCC-----CCC------------------CCCCccchHHHHHHhcCceeEeeCHHH
Q 008028 240 ALLPCYLKFMYQSKGIHKNAKRLCRPR-----YDK------------------PVKGRKINWMKAGILESDRVLTVSPHY 296 (580)
Q Consensus 240 ~~l~~~l~~~~~~~gi~~~~~~~~l~~-----~~~------------------~~~~~~~~~~~~~~~~ad~vi~vS~~~ 296 (580)
++++.+++..+ .+.+....+||+|. ... ......++++|.++..||.|.+||+.+
T Consensus 142 ~L~~~~lk~~~--~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 142 GLLPAYLKQRY--RSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHhhcc--cccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 99999999865 22333334466551 000 011134588999999999999999999
Q ss_pred HHHHHccccCCcchhhhhh--cCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 297 AKELISGEEKGVELDNIIR--KTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 297 ~~~l~~~~~~g~~~~~~~~--~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
++++. ...+|...+.+++ ..++..|.||+|...|+|.+++.+..+|+..++. +|..++..+++.+|++.+.+.|+|
T Consensus 220 a~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL~~~~~~pl~ 297 (487)
T COG0297 220 AGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGLDVDLPGPLF 297 (487)
T ss_pred HHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCCCCCCCCcEE
Confidence 99998 3456665555554 3689999999999999999999999999999886 599999999999999988899999
Q ss_pred EEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCC
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSR 454 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~ 454 (580)
+++||+..|||+|++++++..+.+..+|++++|+|...++..+..++..+++++.....|+..+++.+++++|++++||+
T Consensus 298 ~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPSr 377 (487)
T COG0297 298 GFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSR 377 (487)
T ss_pred EEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCCc
Confidence 99999999999999999999998888999999999989999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCCcceeEec--------CceeEEEeecccccccCCcccHHHHHHHHHHHHHhcCh-h
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKE--------GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGT-P 525 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~--------~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~-~ 525 (580)
+||||+++++||++|+++|+..+||+.|++.+ ..+|++| .+.+.++++.+|.+++..|.. +
T Consensus 378 fEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~rA~~~y~~~~ 447 (487)
T COG0297 378 FEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRRALVLYRAPP 447 (487)
T ss_pred CcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHHHHHHhhCCH
Confidence 99999999999999999999999999999986 5799998 888999999999999997754 4
Q ss_pred H-HHHHHHHHHHhcCCchHHHHHHHHHHHHHHhc
Q 008028 526 A-LKEMIQNCMALDLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 526 ~-~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 558 (580)
. |+.+.+++|..+|||+..+++|.+.|+.+...
T Consensus 448 ~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 448 LLWRKVQPNAMGADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred HHHHHHHHhhcccccCchhHHHHHHHHHHHHhcc
Confidence 4 89999999999999999999999999998754
No 10
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=5.1e-51 Score=446.86 Aligned_cols=443 Identities=18% Similarity=0.211 Sum_probs=357.4
Q ss_pred EEEEeecc-----cCccccccHHHHhccchHHHHhCCCeEEEEEecCCc---------------ccccc-----------
Q 008028 87 LVFVGAEV-----APWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQ---------------YKDAW----------- 135 (580)
Q Consensus 87 I~~vs~e~-----~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~---------------~~~~~----------- 135 (580)
|+|||+|| .|.+ +||+|++++++.++++++|.+.+.++.+|+. ..+.|
T Consensus 1 ~ayf~~E~g~~~~~p~y-sGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLPIY-SGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCCcc-CchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 68999994 5888 9999999999999999999999999999861 01112
Q ss_pred ---CCcEEEEEEeCCeEEEEEEEEEEecCeeEEEecCccchhhhccCCCC-cccCCCCCCCCCchHHHHHHHHHHHHHHh
Q 008028 136 ---DTSVLAEVKVGDSIETVRFFHCYKRGVDRVFVDHPVFLEKVWGKTGS-KIYGPKAGLDYEDNQLRFSLLCQAALEAP 211 (580)
Q Consensus 136 ---~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~l~~~~~~~~ 211 (580)
+....+.+.++++...+++|...++++++|+++++...+..++|... .+|++ |..+|..|+.+|+.++++.+
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~----D~~~R~~Qe~fl~~a~l~~l 155 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG----DKEMRIAQEIVLGIGGVRAL 155 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC----CHHHHHHHHHHHHHHHHHHH
Confidence 22446778888899999999999999999999999865656666433 58975 56788899999999999999
Q ss_pred HHhccCCCCCCCCCCCCceEEEecCCccchHHHHHH-HhhhccCc-----cc--cceE-EEcC-----CC--CC-CC---
Q 008028 212 RILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCYLK-FMYQSKGI-----HK--NAKR-LCRP-----RY--DK-PV--- 271 (580)
Q Consensus 212 r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~l~-~~~~~~gi-----~~--~~~~-~~l~-----~~--~~-~~--- 271 (580)
+.++. +|| |+|+||||+++++.++. .++ ..++ +. ..++ ||.| +. .+ ..
T Consensus 156 ~~l~~----------~pd-viH~ND~Htal~~~el~r~l~-~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~ 223 (601)
T TIGR02094 156 RALGI----------DPD-VYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRK 223 (601)
T ss_pred HHcCC----------Cce-EEEeCCchHHHHHHHHHHHHH-HcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHH
Confidence 98865 489 99999999999999853 323 1121 11 2334 7766 11 00 00
Q ss_pred -------------------------CCccchHHHHHHhcCceeEeeCHHHHH---HHHccccCCcchhhhhhcCCeeEec
Q 008028 272 -------------------------KGRKINWMKAGILESDRVLTVSPHYAK---ELISGEEKGVELDNIIRKTGISGIV 323 (580)
Q Consensus 272 -------------------------~~~~~~~~~~~~~~ad~vi~vS~~~~~---~l~~~~~~g~~~~~~~~~~~i~~I~ 323 (580)
....++|++.++..||.|++||+.+++ .+....+.+.+.. ..++..|+
T Consensus 224 ~~~~~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~----~~~i~gIt 299 (601)
T TIGR02094 224 YFGDYAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEE----EVPIGYVT 299 (601)
T ss_pred HhhhhhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccc----cCCcccee
Confidence 013589999999999999999997777 5444333333322 23799999
Q ss_pred CCCCCCCcCCCCccccccccCchhh---------------------hccchHHHHHHHH---------------------
Q 008028 324 NGMDVQEWNPSTDRYINVNYDATTV---------------------MNAKPLVKEALQS--------------------- 361 (580)
Q Consensus 324 NGvd~~~~~~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~~--------------------- 361 (580)
||||...|.|.+++.|..+|++++| ...|..+|..+++
T Consensus 300 NGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 379 (601)
T TIGR02094 300 NGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILM 379 (601)
T ss_pred CCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhh
Confidence 9999999999999999999999884 3788889999887
Q ss_pred HcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC------CCeEEEEEecCCh------hhHHHHHHHHHH--CCCC
Q 008028 362 QLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG------GNVQIVVLGTGKK------PMEQQIEQLEII--CPEK 427 (580)
Q Consensus 362 ~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~------~~v~lii~G~g~~------~~~~~i~~l~~~--~~~~ 427 (580)
++|++.+++.++|+|++|+.+|||.++++++++++.+ .++||||+|++.+ ++++.+.+++.+ ++++
T Consensus 380 ~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~k 459 (601)
T TIGR02094 380 ATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGR 459 (601)
T ss_pred hhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCC
Confidence 5788889999999999999999999999999998853 5899999999874 499999999998 8889
Q ss_pred eeEeccCChHHHHHHHhcCCEEEe-cCC-CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEee---ccccccc
Q 008028 428 ARGITKFSTPLAHKIIAGADFMLV-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRS---FHVECDR 502 (580)
Q Consensus 428 v~~~~~~~~~~~~~~~~~aDi~l~-ps~-~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~---~~~~~~~ 502 (580)
+.++..|+..+++.++++||+|++ ||+ +|+||+++|.||.+|. +..|..+||+....++.|||.||. +.+ -+.
T Consensus 460 v~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGg-L~~sv~DG~~~E~~~~~nGf~f~~~~~~~~-~~~ 537 (601)
T TIGR02094 460 IVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGV-LNLSILDGWWGEGYDGDNGWAIGDGEEYDD-EEE 537 (601)
T ss_pred EEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCC-ceeecccCcccccCCCCcEEEECCCccccc-ccc
Confidence 999999999999999999999999 999 9999999999999999 555666777777678899999972 111 112
Q ss_pred CCcccHHHHHHHHHHHH-H-hcC------hhHHHHHHHHHHHh---cCCchHHHHHHHHHH
Q 008028 503 VDLADVAAIAKHVNRAV-A-TYG------TPALKEMIQNCMAL---DLSWKEPARLWEKML 552 (580)
Q Consensus 503 v~~~d~~~la~~l~~ll-~-~~~------~~~~~~~~~~~~~~---~fs~~~~a~~~~~~~ 552 (580)
-|..|.+++-++|.+.+ . .|+ +..|.+|++++|++ +|||++|+++|.+.|
T Consensus 538 ~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 538 QDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 25689999999998777 4 223 34599999999998 799999999999987
No 11
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=4.3e-36 Score=321.75 Aligned_cols=385 Identities=18% Similarity=0.189 Sum_probs=265.3
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeE
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDR 164 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (580)
|||++|+..|+|. .||.+.++.+|+++|.++||+|+|+|+.. .++. |.... ............+|+++
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~-~~~~-~~~~~--------~~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPP-YYPQ-WRVGE--------GYSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCC-CCCC-CCCCc--------ccccccceeeecCCeEE
Confidence 8999999999897 69999999999999999999999999752 1111 10000 00000111122456777
Q ss_pred EEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHh-HHhccCCCCCCCCCCCCceEEEecCCcc--ch
Q 008028 165 VFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAP-RILNLNNNKYFSGPYGEDVLFIGNDWHT--AL 241 (580)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~-r~l~~~~~~~~~~~~~pDvVih~~~~~~--~~ 241 (580)
+.++...... .. ...+......+....+..+ +... .+|| |+|+|.+.. +.
T Consensus 69 ~r~~~~~~~~---------~~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~p~~~~~~ 121 (412)
T PRK10307 69 WRCPLYVPKQ---------PS-------GLKRLLHLGSFALSSFFPLLAQRR----------WRPD-RVIGVVPTLFCAP 121 (412)
T ss_pred EEccccCCCC---------cc-------HHHHHHHHHHHHHHHHHHHhhccC----------CCCC-EEEEeCCcHHHHH
Confidence 6654311100 00 0011222222222222222 2211 1589 888885432 23
Q ss_pred HHHHHHHhhhccCccccceEEEcCCCCC-------CCCCc-----cchHHHHHHhcCceeEeeCHHHHHHHHccccCCcc
Q 008028 242 LPCYLKFMYQSKGIHKNAKRLCRPRYDK-------PVKGR-----KINWMKAGILESDRVLTVSPHYAKELISGEEKGVE 309 (580)
Q Consensus 242 l~~~l~~~~~~~gi~~~~~~~~l~~~~~-------~~~~~-----~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~ 309 (580)
++..+++..+.+.+ +.+++... ..... ...+++.+++.+|.++++|+...+.+.+ .|.+
T Consensus 122 ~~~~~~~~~~~~~v------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~---~~~~ 192 (412)
T PRK10307 122 GARLLARLSGARTW------LHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKARE---KGVA 192 (412)
T ss_pred HHHHHHHhhCCCEE------EEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHH---cCCC
Confidence 33445554332211 33332211 00111 1124567788999999999999999876 4554
Q ss_pred hhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHH
Q 008028 310 LDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDIL 389 (580)
Q Consensus 310 ~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~l 389 (580)
.+ ++.+|+||+|.+.|.+.... ....++++++++ ++.++|+|+||+.+.||++.|
T Consensus 193 ~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~--~~~~~i~~~G~l~~~kg~~~l 247 (412)
T PRK10307 193 AE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLP--DGKKIVLYSGNIGEKQGLELV 247 (412)
T ss_pred cc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCC--CCCEEEEEcCccccccCHHHH
Confidence 44 89999999999888764321 134567788885 355899999999999999999
Q ss_pred HHHHhhhcC-CCeEEEEEecCChhhHHHHHHHHHHCC-CCeeEeccCChHHHHHHHhcCCEEEecCCCCC----ccHHHH
Q 008028 390 AQAIPKFMG-GNVQIVVLGTGKKPMEQQIEQLEIICP-EKARGITKFSTPLAHKIIAGADFMLVPSRFEP----CGLIQL 463 (580)
Q Consensus 390 l~a~~~l~~-~~v~lii~G~g~~~~~~~i~~l~~~~~-~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~----~g~~~l 463 (580)
++|++++.+ ++++|+|+|+|+ ..+.++++..+++ .++.+.+..+.+.+..+++.||++++||..|+ +|.+++
T Consensus 248 i~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~ 325 (412)
T PRK10307 248 IDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLT 325 (412)
T ss_pred HHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHH
Confidence 999998865 579999999987 4556666655443 35888877777888889999999999999988 577799
Q ss_pred HHHHcCCceEEcCCCCc--ceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhc
Q 008028 464 HAMRYGTVPIVASTGGL--FDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALD 538 (580)
Q Consensus 464 EAma~G~PvI~s~~gg~--~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~ 538 (580)
|||+||+|||+|+.+|. .+++. .+|+++ +++|+++++++|.+++++ ++.+.+|++++ +.++
T Consensus 326 eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~~--~~~~~~~~~~a~~~~~~~ 391 (412)
T PRK10307 326 NMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALARQ--ALLRPKLGTVAREYAERT 391 (412)
T ss_pred HHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHH
Confidence 99999999999998773 46665 589998 999999999999999987 66667777766 4568
Q ss_pred CCchHHHHHHHHHHHHHHhc
Q 008028 539 LSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 539 fs~~~~a~~~~~~~~~l~~~ 558 (580)
|||+.++++|+++|++++.+
T Consensus 392 fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 392 LDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred cCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999998753
No 12
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=3e-36 Score=322.05 Aligned_cols=373 Identities=19% Similarity=0.249 Sum_probs=263.9
Q ss_pred EEEEeecccCcc-----ccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecC
Q 008028 87 LVFVGAEVAPWS-----KTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRG 161 (580)
Q Consensus 87 I~~vs~e~~P~~-----~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (580)
|++++....|+. ..||.+.++.+|+++|+++||+|+++|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 567777766642 259999999999999999999999999864211100 0011235
Q ss_pred eeEEEecCccchhhhccCCCCcccCCCCCCCCCchHH-HHHHHHHHHH-HHhHHhccCCCCCCCCCCCCceEEEecCCcc
Q 008028 162 VDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQL-RFSLLCQAAL-EAPRILNLNNNKYFSGPYGEDVLFIGNDWHT 239 (580)
Q Consensus 162 v~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~-~~~~l~~~~~-~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~ 239 (580)
+.++.+....+... . ..+.. .+..+....+ ..++... .+|| |+|+|.|.+
T Consensus 61 ~~v~~~~~~~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iih~h~~~~ 112 (405)
T TIGR03449 61 VRVRNVVAGPYEGL----------------D-KEDLPTQLCAFTGGVLRAEARHEP----------GYYD-LIHSHYWLS 112 (405)
T ss_pred cEEEEecCCCcccC----------------C-HHHHHHHHHHHHHHHHHHHhhccC----------CCCC-eEEechHHH
Confidence 55554432111100 0 00111 1111222222 2222211 1589 889999888
Q ss_pred chHHHHHHHhhhccCccccceE-EEcCCCCCC---------CCC--ccchHHHHHHhcCceeEeeCHHHHHHHHccccCC
Q 008028 240 ALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKP---------VKG--RKINWMKAGILESDRVLTVSPHYAKELISGEEKG 307 (580)
Q Consensus 240 ~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~---------~~~--~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g 307 (580)
++++..+++..+. ++ ++.|+.... ... .....++..++.+|.++++|+...+.+... +|
T Consensus 113 ~~~~~~~~~~~~~-------p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~--~~ 183 (405)
T TIGR03449 113 GQVGWLLRDRWGV-------PLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVRH--YD 183 (405)
T ss_pred HHHHHHHHHhcCC-------CEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH--cC
Confidence 7777666554322 33 555532110 000 011123557789999999999988888752 34
Q ss_pred cchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHH
Q 008028 308 VELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSD 387 (580)
Q Consensus 308 ~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~ 387 (580)
.+.+ ++.+|+||+|.+.|.+.. +...+++++++ ++.++|+|+||+.++||++
T Consensus 184 ~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~--~~~~~i~~~G~l~~~K~~~ 235 (405)
T TIGR03449 184 ADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLP--LDTKVVAFVGRIQPLKAPD 235 (405)
T ss_pred CChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCC--CCCcEEEEecCCCcccCHH
Confidence 4433 899999999998886542 34456777875 3568999999999999999
Q ss_pred HHHHHHhhhcC--CC--eEEEEEecCCh---hhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCCCCc
Q 008028 388 ILAQAIPKFMG--GN--VQIVVLGTGKK---PMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRFEPC 458 (580)
Q Consensus 388 ~ll~a~~~l~~--~~--v~lii~G~g~~---~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~ 458 (580)
.++++++++.+ ++ ++|+|+|.+.. ...+.++++..+.+ +++.+.+..+.+.+..+++.||++++||..|++
T Consensus 236 ~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~ 315 (405)
T TIGR03449 236 VLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESF 315 (405)
T ss_pred HHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCc
Confidence 99999998854 34 99999996321 24455666665543 468887777777888899999999999999999
Q ss_pred cHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH--HH
Q 008028 459 GLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC--MA 536 (580)
Q Consensus 459 g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~ 536 (580)
|++++|||++|+|||+++.||..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.+|.+++ ..
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~l~~--~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARLLDD--PRTRIRMGAAAVEHA 383 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997 899999999999999986 66666776665 33
Q ss_pred hcCCchHHHHHHHHHHHHHH
Q 008028 537 LDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 537 ~~fs~~~~a~~~~~~~~~l~ 556 (580)
++|||+.++++|.++|.+++
T Consensus 384 ~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 384 AGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HhCCHHHHHHHHHHHHHHHh
Confidence 68999999999999999876
No 13
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=5.7e-36 Score=338.00 Aligned_cols=430 Identities=18% Similarity=0.145 Sum_probs=275.7
Q ss_pred CCceEEEEeecccC---------ccccccHHHHhccchHHHHhCC--CeEEEEEecCCccccccCCcEEEEEEeCCeEEE
Q 008028 83 QGMNLVFVGAEVAP---------WSKTGGLGDVLGGLPPALAARG--HRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIET 151 (580)
Q Consensus 83 ~~mkI~~vs~e~~P---------~~~~GG~g~~~~~l~~aL~~~G--~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~ 151 (580)
++|.|++||..-.| ...+||...++.+|+++|+.+| |+|.++|-....-...|+-....+.......+.
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~ 247 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSEN 247 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccccc
Confidence 35899999976221 2338999999999999999998 899999986532111111011111000000000
Q ss_pred EEEEEEEecCeeEEEecCcc---chhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHH----hccCCCCCCC-
Q 008028 152 VRFFHCYKRGVDRVFVDHPV---FLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRI----LNLNNNKYFS- 223 (580)
Q Consensus 152 ~~~~~~~~~gv~~~~l~~~~---~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~----l~~~~~~~~~- 223 (580)
........+|+.++.+.... ++++ +.-+....-|...++..++. ++.. +.
T Consensus 248 ~~~~~~~~~g~rIvRip~GP~~~~l~K------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~----~~~ 305 (1050)
T TIGR02468 248 DGDEMGESSGAYIIRIPFGPRDKYIPK------------------EELWPYIPEFVDGALSHIVNMSKVLGEQ----IGS 305 (1050)
T ss_pred ccccccCCCCeEEEEeccCCCCCCcCH------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhh----hcc
Confidence 00001122456665554221 1111 11111222344444444332 1110 00
Q ss_pred C-CCCCceEEEecCCccchHHHHHHHhhhccCccccceEEEcCCC--CCC------------------CCCccchHHHHH
Q 008028 224 G-PYGEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCRPRY--DKP------------------VKGRKINWMKAG 282 (580)
Q Consensus 224 ~-~~~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~~~--~~~------------------~~~~~~~~~~~~ 282 (580)
+ +-.|| |||+|+|.++.++..++.....+-+ +|.|.. .+. ...+.+..++.+
T Consensus 306 ~~~~~pD-vIHaHyw~sG~aa~~L~~~lgVP~V------~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~ 378 (1050)
T TIGR02468 306 GHPVWPY-VIHGHYADAGDSAALLSGALNVPMV------LTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELS 378 (1050)
T ss_pred ccCCCCC-EEEECcchHHHHHHHHHHhhCCCEE------EECccchhhhhhhhcccccccccccccccchHHHHHHHHHH
Confidence 0 11389 9999999999999999887654332 444421 110 011334456778
Q ss_pred HhcCceeEeeCHHHHHHHHccccCCcchh--hhhh-------------cCCeeEecCCCCCCCcCCCCccccccccCch-
Q 008028 283 ILESDRVLTVSPHYAKELISGEEKGVELD--NIIR-------------KTGISGIVNGMDVQEWNPSTDRYINVNYDAT- 346 (580)
Q Consensus 283 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~--~~~~-------------~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~- 346 (580)
+..||.||++|+...+++...|. ++++. ..++ ..++.|||||||+..|.|.....-.......
T Consensus 379 l~~Ad~VIasT~qE~~eq~~lY~-~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~ 457 (1050)
T TIGR02468 379 LDASEIVITSTRQEIEEQWGLYD-GFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEE 457 (1050)
T ss_pred HHhcCEEEEeCHHHHHHHHHHhc-cCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhccccc
Confidence 99999999999999988765431 22210 1110 1289999999999999885321000000000
Q ss_pred hhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC----CCeEEEEEecCCh---------hh
Q 008028 347 TVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG----GNVQIVVLGTGKK---------PM 413 (580)
Q Consensus 347 ~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~----~~v~lii~G~g~~---------~~ 413 (580)
......+.....+++.+. +++.++|+|+||+.++||++.||+|+.++.+ .++. +|+|.++. ..
T Consensus 458 ~~~~~~~~~~~~l~r~~~---~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~ 533 (1050)
T TIGR02468 458 HPAKPDPPIWSEIMRFFT---NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSV 533 (1050)
T ss_pred ccccccchhhHHHHhhcc---cCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHH
Confidence 000000001123333333 3567899999999999999999999998853 3565 45676541 12
Q ss_pred HHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcC----CEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecC
Q 008028 414 EQQIEQLEIICP--EKARGITKFSTPLAHKIIAGA----DFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEG 487 (580)
Q Consensus 414 ~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~a----Di~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~ 487 (580)
...+.++..++. ++|.+.+..+...+..+|+.| |++++||.+|+||++++|||+||+|||+|+.||+.|++.++
T Consensus 534 l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g 613 (1050)
T TIGR02468 534 LTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVL 613 (1050)
T ss_pred HHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccC
Confidence 344555655544 567777666677777888877 69999999999999999999999999999999999999999
Q ss_pred ceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHH--HhcCCchHHHHHHHHHHHHHHhc
Q 008028 488 ITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCM--ALDLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 488 ~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~~~ 558 (580)
.+|+++ ++.|+++++++|.+++++ ++.+.+|++++. .+.|||+.++++|++.|..+...
T Consensus 614 ~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 614 DNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPR 674 (1050)
T ss_pred CcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcc
Confidence 999998 999999999999999997 777888887763 35799999999999999987643
No 14
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=1.8e-35 Score=313.70 Aligned_cols=362 Identities=22% Similarity=0.285 Sum_probs=258.7
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeE
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDR 164 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (580)
|||++|+..|+|.. .||.+.++.+|+++|.++ |+|.|++...+.. ..+++++
T Consensus 1 mkI~~i~~~~~p~~-~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPNV-YGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCccc-cccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 89999999988863 699999999999999987 7777777642110 0123333
Q ss_pred EEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHH
Q 008028 165 VFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPC 244 (580)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~ 244 (580)
+.+....... . +. +... .+.. .+...... .++| |+|+|.|.+++.+.
T Consensus 53 ~~~~~~~~~~--------~---------~~-~~~~--~~~~---~~~~~~~~---------~~~d-ivh~~~~~~~~~~~ 99 (388)
T TIGR02149 53 KGYRPWSELK--------E---------AN-KALG--TFSV---DLAMANDP---------VDAD-VVHSHTWYTFLAGH 99 (388)
T ss_pred EEecChhhcc--------c---------hh-hhhh--hhhH---HHHHhhCC---------CCCC-eEeecchhhhhHHH
Confidence 3222110000 0 00 0000 0111 11111111 1589 89999988776655
Q ss_pred HHHHhhhccCccccceE-EEcCCCCCCCCC---------c-cchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhh
Q 008028 245 YLKFMYQSKGIHKNAKR-LCRPRYDKPVKG---------R-KINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNI 313 (580)
Q Consensus 245 ~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~---------~-~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~ 313 (580)
.++... ..++ +++|+....... . ...+.+..++.+|.++++|+.+++.+.+.+ .+++.+
T Consensus 100 ~~~~~~-------~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~-~~~~~~-- 169 (388)
T TIGR02149 100 LAKKLY-------DKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKYY-PDLDPE-- 169 (388)
T ss_pred HHHHhc-------CCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHc-CCCCcc--
Confidence 554432 2233 556543221000 0 112356678899999999999999888622 244333
Q ss_pred hhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHH
Q 008028 314 IRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAI 393 (580)
Q Consensus 314 ~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~ 393 (580)
++.+|+||+|...|.+.. +..++++++++ ++.++|+|+||+.++||++.|++++
T Consensus 170 ----~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~--~~~~~i~~~Grl~~~Kg~~~li~a~ 223 (388)
T TIGR02149 170 ----KVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGID--RSRPYILFVGRITRQKGVPHLLDAV 223 (388)
T ss_pred ----eEEEecCCCChhhcCCCc--------------------hHHHHHHhCCC--CCceEEEEEcccccccCHHHHHHHH
Confidence 899999999998886642 34567788875 4568999999999999999999999
Q ss_pred hhhcCCCeEEEEEecCC--hhhHHHHHHHHHHCCC---CeeEec-cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHH
Q 008028 394 PKFMGGNVQIVVLGTGK--KPMEQQIEQLEIICPE---KARGIT-KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMR 467 (580)
Q Consensus 394 ~~l~~~~v~lii~G~g~--~~~~~~i~~l~~~~~~---~v~~~~-~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma 467 (580)
+++. ++++++|+|+|+ ..+.+.+++...++.. ++.++. ..+...+..+++.||++++||.+|++|++++|||+
T Consensus 224 ~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a 302 (388)
T TIGR02149 224 HYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMA 302 (388)
T ss_pred HHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHH
Confidence 9884 578899988765 3455666666554432 355554 35677788899999999999999999999999999
Q ss_pred cCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccH------HHHHHHHHHHHHhcChhHHHHHHHHH---HHhc
Q 008028 468 YGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADV------AAIAKHVNRAVATYGTPALKEMIQNC---MALD 538 (580)
Q Consensus 468 ~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~------~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~ 538 (580)
||+|||+|+.||..|++.++.+|+++ ++.|. ++++++|.+++++ ++.+.+|++++ ..++
T Consensus 303 ~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~ 370 (388)
T TIGR02149 303 CGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLAD--PELAKKMGIAGRKRAEEE 370 (388)
T ss_pred cCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998 88887 9999999999987 77777777766 4478
Q ss_pred CCchHHHHHHHHHHHHHH
Q 008028 539 LSWKEPARLWEKMLLSME 556 (580)
Q Consensus 539 fs~~~~a~~~~~~~~~l~ 556 (580)
|||+.++++|.++|++++
T Consensus 371 ~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 371 FSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred CCHHHHHHHHHHHHHhhC
Confidence 999999999999998763
No 15
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.3e-35 Score=318.48 Aligned_cols=372 Identities=18% Similarity=0.166 Sum_probs=247.7
Q ss_pred cCccccccHHHHhccchHHHHhCCC--eEEEEEecCCccc--cccCCcEEEEEEeCCeEEEEEEEEEEecCeeEEEecCc
Q 008028 95 APWSKTGGLGDVLGGLPPALAARGH--RVMSVAPRYDQYK--DAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRVFVDHP 170 (580)
Q Consensus 95 ~P~~~~GG~g~~~~~l~~aL~~~G~--~V~vi~~~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~ 170 (580)
.|. .||.+.++.+|+++|+++|| +|+|+|..++.-. ..+. ..+.....|++++.+...
T Consensus 22 ~p~--~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~ 83 (439)
T TIGR02472 22 DAD--TGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFG 83 (439)
T ss_pred CCC--CCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCC
Confidence 355 79999999999999999997 9999997653210 0000 011122356777766421
Q ss_pred cchhhhccCCCCcccCCCCCCCCCchHH-HHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHHHHHh
Q 008028 171 VFLEKVWGKTGSKIYGPKAGLDYEDNQL-RFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCYLKFM 249 (580)
Q Consensus 171 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~-~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~l~~~ 249 (580)
.. .|.. ..... ....+.....+.++.... +|| |||+|.|++++++..++..
T Consensus 84 ~~-----------~~~~------~~~~~~~~~~~~~~l~~~~~~~~~----------~~D-vIH~h~~~~~~~~~~~~~~ 135 (439)
T TIGR02472 84 PR-----------RYLR------KELLWPYLDELADNLLQHLRQQGH----------LPD-LIHAHYADAGYVGARLSRL 135 (439)
T ss_pred CC-----------CCcC------hhhhhhhHHHHHHHHHHHHHHcCC----------CCC-EEEEcchhHHHHHHHHHHH
Confidence 10 0100 00011 112233344444443211 489 9999999888887776655
Q ss_pred hhccCccccceE-EEcCCCCCCCC-------------------CccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcc
Q 008028 250 YQSKGIHKNAKR-LCRPRYDKPVK-------------------GRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVE 309 (580)
Q Consensus 250 ~~~~gi~~~~~~-~~l~~~~~~~~-------------------~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~ 309 (580)
.+. ++ ++.|+...... ...+.+++..++.+|.++++|+...+..... ..+++
T Consensus 136 ~~~-------p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~~~~ 207 (439)
T TIGR02472 136 LGV-------PLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYAL-YDSYQ 207 (439)
T ss_pred hCC-------CEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHh-ccCCC
Confidence 432 33 56664321100 0011235667889999999997654443221 12444
Q ss_pred hhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHH
Q 008028 310 LDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDIL 389 (580)
Q Consensus 310 ~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~l 389 (580)
.+ ++.+||||+|.+.|.|.... ......+..++ +++++ ++.++|+|+||+.+.||++.|
T Consensus 208 ~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~~-~~~~~--~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 208 PE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLLA-PFLKD--PEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred cc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHHH-hhccc--cCCcEEEEEcCCcccCCHHHH
Confidence 44 89999999999988775321 00001122222 23332 355799999999999999999
Q ss_pred HHHHhhhc--CCCeEEE-EEecCCh--hh-------HHHHHHHHHH--CCCCeeEeccCChHHHHHHHhcC----CEEEe
Q 008028 390 AQAIPKFM--GGNVQIV-VLGTGKK--PM-------EQQIEQLEII--CPEKARGITKFSTPLAHKIIAGA----DFMLV 451 (580)
Q Consensus 390 l~a~~~l~--~~~v~li-i~G~g~~--~~-------~~~i~~l~~~--~~~~v~~~~~~~~~~~~~~~~~a----Di~l~ 451 (580)
++|+.++. +++.+++ |+|+|+. .+ .+.+.++..+ +.+++.+.+....+.+..+|+.| |++++
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~ 346 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVN 346 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhcCCEEec
Confidence 99998642 2234443 5687652 12 1223334443 34567777766777777888876 99999
Q ss_pred cCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHH
Q 008028 452 PSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMI 531 (580)
Q Consensus 452 ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~ 531 (580)
||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.+|+
T Consensus 347 pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~~~~~~~ 414 (439)
T TIGR02472 347 PALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALSD--SSQWQLWS 414 (439)
T ss_pred ccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHH
Confidence 999999999999999999999999999999999999999998 999999999999999997 66667777
Q ss_pred HHH---HHhcCCchHHHHHHHHHHH
Q 008028 532 QNC---MALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 532 ~~~---~~~~fs~~~~a~~~~~~~~ 553 (580)
+++ +.++|||+.++++|+++++
T Consensus 415 ~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 415 RNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 665 5578999999999998763
No 16
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=4.1e-35 Score=312.78 Aligned_cols=360 Identities=18% Similarity=0.222 Sum_probs=249.8
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++|+..+.|. .||.++.+..|+++|.++||+|+|+++.++..... + ....+++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~------------------~---~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI------------------R---YLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc------------------c---cccCceeEE
Confidence 799999999997 69999999999999999999999999864311110 0 001234444
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHH--
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLP-- 243 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~-- 243 (580)
.+........ ..+. +. ..........++.. +|| |+|+|++...+..
T Consensus 58 ~~p~~~~~~~------~~~~----------~~---~~~~~~l~~~~~~~------------~~D-iIh~~~~~~~~~~~~ 105 (398)
T cd03796 58 YLPFVVFYNQ------STLP----------TF---FGTFPLLRNILIRE------------RIT-IVHGHQAFSALAHEA 105 (398)
T ss_pred EecceeccCC------cccc----------ch---hhhHHHHHHHHHhc------------CCC-EEEECCCCchHHHHH
Confidence 4322111000 0000 00 01111122222222 599 9999987655432
Q ss_pred HHHHHhhhccCccccceE-EEcCCCCCCCC--C-ccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCe
Q 008028 244 CYLKFMYQSKGIHKNAKR-LCRPRYDKPVK--G-RKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGI 319 (580)
Q Consensus 244 ~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~--~-~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i 319 (580)
..+.+.. ..++ ++.|+...... . ....+++..++.+|.++++|+...+.+.. ..+.+.+ ++
T Consensus 106 ~~~~~~~-------~~~~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~~~~~~------k~ 170 (398)
T cd03796 106 LLHARTM-------GLKTVFTDHSLFGFADASSIHTNKLLRFSLADVDHVICVSHTSKENTVL--RASLDPE------RV 170 (398)
T ss_pred HHHhhhc-------CCcEEEEecccccccchhhHHhhHHHHHhhccCCEEEEecHhHhhHHHH--HhCCChh------hE
Confidence 2222222 2234 66665322111 1 11224466678999999999998886543 1334333 89
Q ss_pred eEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC-
Q 008028 320 SGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG- 398 (580)
Q Consensus 320 ~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~- 398 (580)
.+|+||+|.+.|.+...+ ..++.++|+|+||+.++||++.|+++++.+.+
T Consensus 171 ~vi~ngvd~~~f~~~~~~-----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~ 221 (398)
T cd03796 171 SVIPNAVDSSDFTPDPSK-----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEICKK 221 (398)
T ss_pred EEEcCccCHHHcCCCccc-----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHHHhh
Confidence 999999998888765321 02356899999999999999999999998864
Q ss_pred -CCeEEEEEecCChhhHHHHHHHHHHC--CCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEc
Q 008028 399 -GNVQIVVLGTGKKPMEQQIEQLEIIC--PEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVA 475 (580)
Q Consensus 399 -~~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s 475 (580)
++++|+|+|+|+ ..+.++++..++ .+++.+.+..+.+.+..+++.||++++||..|++|++++|||+||+|||+|
T Consensus 222 ~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s 299 (398)
T cd03796 222 HPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVST 299 (398)
T ss_pred CCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEEC
Confidence 789999999987 344555555544 356888887777888889999999999999999999999999999999999
Q ss_pred CCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChh-HHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 008028 476 STGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTP-ALKEMIQNCMALDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 476 ~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~-~~~~~~~~~~~~~fs~~~~a~~~~~~~~~ 554 (580)
+.||..|++.++. +++ .+.|+++++++|.+++++.... ...+..++.+.++|||+.++++|.++|++
T Consensus 300 ~~gg~~e~i~~~~-~~~-----------~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 367 (398)
T cd03796 300 RVGGIPEVLPPDM-ILL-----------AEPDVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDR 367 (398)
T ss_pred CCCCchhheeCCc-eee-----------cCCCHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999998764 333 4458999999999999863222 12233334467899999999999999999
Q ss_pred HHhc
Q 008028 555 MEVA 558 (580)
Q Consensus 555 l~~~ 558 (580)
++..
T Consensus 368 l~~~ 371 (398)
T cd03796 368 ILQT 371 (398)
T ss_pred HhcC
Confidence 8753
No 17
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.9e-35 Score=315.39 Aligned_cols=271 Identities=18% Similarity=0.204 Sum_probs=217.1
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceEEEcCCCCCCCC---CccchHHHHHHhcCceeEeeCHHHHHHHHcc
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCRPRYDKPVK---GRKINWMKAGILESDRVLTVSPHYAKELISG 303 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~ 303 (580)
+|| ++|+|.++.+.....++.. +......+++.|+.+.... .....+.+..++.+|.++++|+..++.+.+
T Consensus 118 ~~d-iihaH~~~~~~~~~~~~~~----~~~~~~~~~t~Hg~d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~- 191 (406)
T PRK15427 118 VAD-VFIAHFGPAGVTAAKLREL----GVLRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQK- 191 (406)
T ss_pred CCC-EEEEcCChHHHHHHHHHHh----CCCCCCeEEEEcccccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHHH-
Confidence 589 9999998877666666543 2222222367776532211 111125677788999999999999999986
Q ss_pred ccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccc
Q 008028 304 EEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQ 383 (580)
Q Consensus 304 ~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~ 383 (580)
.|++.+ ++.+|+||+|.+.|.+.... ...+.+.|+|+||+.++
T Consensus 192 --~g~~~~------ki~vi~nGvd~~~f~~~~~~-----------------------------~~~~~~~il~vGrl~~~ 234 (406)
T PRK15427 192 --MGCPPE------KIAVSRMGVDMTRFSPRPVK-----------------------------APATPLEIISVARLTEK 234 (406)
T ss_pred --cCCCHH------HEEEcCCCCCHHHcCCCccc-----------------------------cCCCCeEEEEEeCcchh
Confidence 566655 89999999999888654211 01234689999999999
Q ss_pred cCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCC-----
Q 008028 384 KGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSR----- 454 (580)
Q Consensus 384 Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~----- 454 (580)
||++.+++|++++.+ ++++++|+|+|+ +.+.++++..+++ +++.+.+..+.+.+..+++.||++++||.
T Consensus 235 Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g 312 (406)
T PRK15427 235 KGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADG 312 (406)
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCC
Confidence 999999999999865 689999999997 4566666666543 56888887788888899999999999997
Q ss_pred -CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHH-hcChhHHHHHHH
Q 008028 455 -FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA-TYGTPALKEMIQ 532 (580)
Q Consensus 455 -~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~-~~~~~~~~~~~~ 532 (580)
+|++|++++|||+||+|||+|+.||..|++.++.+|+++ +++|+++++++|.++++ + ++.+.+|++
T Consensus 313 ~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~~~d~~~la~ai~~l~~~d--~~~~~~~~~ 380 (406)
T PRK15427 313 DMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------PENDAQALAQRLAAFSQLD--TDELAPVVK 380 (406)
T ss_pred CccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------CCCCHHHHHHHHHHHHhCC--HHHHHHHHH
Confidence 499999999999999999999999999999999999998 99999999999999999 6 666777777
Q ss_pred HH---HHhcCCchHHHHHHHHHHHH
Q 008028 533 NC---MALDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 533 ~~---~~~~fs~~~~a~~~~~~~~~ 554 (580)
++ +.++|+|+.+++++.++|++
T Consensus 381 ~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 381 RAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 66 55789999999999999976
No 18
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=3.2e-35 Score=319.71 Aligned_cols=364 Identities=18% Similarity=0.214 Sum_probs=254.4
Q ss_pred CCCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecC
Q 008028 82 QQGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRG 161 (580)
Q Consensus 82 ~~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (580)
+++|||++|+...++ ...||.+.++.+++++|.++||+|+++++.... ... ..+
T Consensus 56 ~~~mrI~~~~~~~~~-~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEPSPF-SYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECCcCC-cccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Ccc------------------------ccC
Confidence 457999999864333 337999999999999999999999999986321 110 011
Q ss_pred eeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccch
Q 008028 162 VDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTAL 241 (580)
Q Consensus 162 v~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~ 241 (580)
+.++.+.. +.. ..|.. . ...+ .+.....+.++.. +|| |||+|......
T Consensus 110 ~~v~~~~~--~~~--------~~~~~-----~---~~~~-~~~~~l~~~i~~~------------kpD-iIh~~~~~~~~ 157 (465)
T PLN02871 110 AKVIGSWS--FPC--------PFYQK-----V---PLSL-ALSPRIISEVARF------------KPD-LIHASSPGIMV 157 (465)
T ss_pred ceeeccCC--cCC--------ccCCC-----c---eeec-cCCHHHHHHHHhC------------CCC-EEEECCCchhH
Confidence 11111100 000 00000 0 0000 0011222333333 599 89998654322
Q ss_pred -HHHHHHHhhhccCccccceE-EEcCCCCCCCC---------CccchHHHHHHhcCceeEeeCHHHHHHHHccccCCc-c
Q 008028 242 -LPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVK---------GRKINWMKAGILESDRVLTVSPHYAKELISGEEKGV-E 309 (580)
Q Consensus 242 -l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~---------~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~-~ 309 (580)
.+..+.+..+ .++ ++.|+...... .....+++...+.+|.++++|+...+.+.+ .+. +
T Consensus 158 ~~~~~~ak~~~-------ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~---~~~~~ 227 (465)
T PLN02871 158 FGALFYAKLLC-------VPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA---AGVTA 227 (465)
T ss_pred HHHHHHHHHhC-------CCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH---cCCCC
Confidence 2333333322 223 44443211100 001123466778999999999999999986 332 2
Q ss_pred hhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHH
Q 008028 310 LDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDIL 389 (580)
Q Consensus 310 ~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~l 389 (580)
.+ ++.+|+||+|.+.|.|... +..+++.+... .++.++|+|+||+.+.||++.+
T Consensus 228 ~~------kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~-~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 228 AN------RIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGG-EPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred cC------eEEEeCCccCccccCCccc-------------------cHHHHHHhcCC-CCCCeEEEEeCCCchhhhHHHH
Confidence 22 8999999999998877532 12234443221 2356899999999999999999
Q ss_pred HHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcC
Q 008028 390 AQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYG 469 (580)
Q Consensus 390 l~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G 469 (580)
+++++++ ++++|+|+|+|+ +.+.++++..+. ++.+.+....+.+..+|+.||++|+||..|++|++++|||+||
T Consensus 282 i~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G 355 (465)
T PLN02871 282 KRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG 355 (465)
T ss_pred HHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcC
Confidence 9999887 589999999987 456677666543 5788777777788889999999999999999999999999999
Q ss_pred CceEEcCCCCcceeEec---CceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHH
Q 008028 470 TVPIVASTGGLFDTVKE---GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEP 544 (580)
Q Consensus 470 ~PvI~s~~gg~~e~i~~---~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~ 544 (580)
+|||+++.||..|++.+ +.+|+++ +++|+++++++|.+++++ ++.+.+|++++ ..++|||+.+
T Consensus 356 ~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~fsw~~~ 423 (465)
T PLN02871 356 VPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--PELRERMGAAAREEVEKWDWRAA 423 (465)
T ss_pred CCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999998 9999998 999999999999999997 67777777776 3368999999
Q ss_pred HHHHHH-HHHHHHh
Q 008028 545 ARLWEK-MLLSMEV 557 (580)
Q Consensus 545 a~~~~~-~~~~l~~ 557 (580)
++++++ .|.+++.
T Consensus 424 a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 424 TRKLRNEQYSAAIW 437 (465)
T ss_pred HHHHHHHHHHHHHH
Confidence 999998 7988765
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4.7e-34 Score=300.56 Aligned_cols=360 Identities=23% Similarity=0.235 Sum_probs=253.0
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeE
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDR 164 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (580)
|||++++ +|. .||.+.++.+++++|.++||+|++++...+...... ..++..
T Consensus 1 mki~~~~---~p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVC---YPT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEE---EeC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 8999998 354 699999999999999999999999997532110000 001111
Q ss_pred EEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHH
Q 008028 165 VFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPC 244 (580)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~ 244 (580)
+.++.+.+... ....| .........+.++.. +|| |+|+|.+.....+.
T Consensus 53 ~~~~~~~~~~~-----~~~~~--------------~~~~~~~l~~~i~~~------------~~d-ivh~~~~~~~~~~~ 100 (371)
T cd04962 53 HEVEVPQYPLF-----QYPPY--------------DLALASKIAEVAKRY------------KLD-LLHVHYAVPHAVAA 100 (371)
T ss_pred EEecccccchh-----hcchh--------------HHHHHHHHHHHHhcC------------Ccc-EEeecccCCccHHH
Confidence 11111100000 00000 011223333333332 599 89999765544444
Q ss_pred HHH-HhhhccCccccceE-EEcCCCCCCC---CCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCe
Q 008028 245 YLK-FMYQSKGIHKNAKR-LCRPRYDKPV---KGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGI 319 (580)
Q Consensus 245 ~l~-~~~~~~gi~~~~~~-~~l~~~~~~~---~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i 319 (580)
.+. ..... ...++ +++|+..... ......+.+..++.+|.++++|+...+.+.+.+ + . ..++
T Consensus 101 ~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--~-~------~~~i 167 (371)
T cd04962 101 YLAREILGK----KDLPVVTTLHGTDITLVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYELF--D-I------TKEI 167 (371)
T ss_pred HHHHHhcCc----CCCcEEEEEcCCccccccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHhc--C-C------cCCE
Confidence 433 22211 12344 6666432211 112234567788999999999999999887621 1 1 1289
Q ss_pred eEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC-
Q 008028 320 SGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG- 398 (580)
Q Consensus 320 ~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~- 398 (580)
.+|+||+|...+.+.. +...+++++++ ++.++++|+||+.+.||++.++++++++.+
T Consensus 168 ~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~--~~~~~il~~g~l~~~K~~~~li~a~~~l~~~ 225 (371)
T cd04962 168 EVIPNFVDEDRFRPKP--------------------DEALKRRLGAP--EGEKVLIHISNFRPVKRIDDVIRIFAKVRKE 225 (371)
T ss_pred EEecCCcCHhhcCCCc--------------------hHHHHHhcCCC--CCCeEEEEecccccccCHHHHHHHHHHHHhc
Confidence 9999999987765542 23345666765 355789999999999999999999998865
Q ss_pred CCeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 399 GNVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 399 ~~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
.+++|+|+|+|.. .+.++++..+.+ +++.+.+. . +.+..+++.||++++||.+|++|++++|||++|+|+|+|+
T Consensus 226 ~~~~l~i~G~g~~--~~~~~~~~~~~~~~~~v~~~g~-~-~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~ 301 (371)
T cd04962 226 VPARLLLVGDGPE--RSPAERLARELGLQDDVLFLGK-Q-DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASN 301 (371)
T ss_pred CCceEEEEcCCcC--HHHHHHHHHHcCCCceEEEecC-c-ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeC
Confidence 5799999999863 344555555443 45777664 3 3466799999999999999999999999999999999999
Q ss_pred CCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHHH
Q 008028 477 TGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 477 ~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~ 553 (580)
.||..|++.++.+|+++ +++|+++++++|.+++++ ++.+.+|.+++ +.+.|||+.++++|.++|+
T Consensus 302 ~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 302 AGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999997 999999999999999986 66677777665 3578999999999999998
Q ss_pred HH
Q 008028 554 SM 555 (580)
Q Consensus 554 ~l 555 (580)
++
T Consensus 370 ~~ 371 (371)
T cd04962 370 RL 371 (371)
T ss_pred hC
Confidence 63
No 20
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=7.3e-34 Score=301.04 Aligned_cols=360 Identities=16% Similarity=0.235 Sum_probs=254.4
Q ss_pred eEEEEeeccc--CccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCee
Q 008028 86 NLVFVGAEVA--PWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVD 163 (580)
Q Consensus 86 kI~~vs~e~~--P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (580)
||+|++++-+ |....||++.++.++++.|+. +|+++|...+.+++.. ...+|+.
T Consensus 4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~---------------------~~~~~~~ 59 (380)
T PRK15484 4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYT---------------------KVNDNCD 59 (380)
T ss_pred eEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCchh---------------------hccCCCc
Confidence 8999998833 223489999999999999953 9999998866545420 0112344
Q ss_pred EEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHH
Q 008028 164 RVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLP 243 (580)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~ 243 (580)
++++..+....+..+ +.+. . ....+.+..+..+...... ++| |+|+|+... +.
T Consensus 60 ~~~~~~~~~~~~~~~----~~~~----------~-~~~~~~~~~~~~~~~~~~~---------~~~-vi~v~~~~~-~~- 112 (380)
T PRK15484 60 IHYIGFSRIYKRLFQ----KWTR----------L-DPLPYSQRILNIAHKFTIT---------KDS-VIVIHNSMK-LY- 112 (380)
T ss_pred eEEEEeccccchhhh----hhhc----------c-CchhHHHHHHHHHHhcCCC---------CCc-EEEEeCcHH-hH-
Confidence 444422111100000 0000 0 0112333333333332211 367 899986322 22
Q ss_pred HHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEe
Q 008028 244 CYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGI 322 (580)
Q Consensus 244 ~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I 322 (580)
..++. .+.+.++ +++|... ....+..++.++++|+..++.+.+. .+ ..++.+|
T Consensus 113 ~~~~~------~~~~~~~v~~~h~~~----------~~~~~~~~~~ii~~S~~~~~~~~~~----~~------~~~i~vI 166 (380)
T PRK15484 113 RQIRE------RAPQAKLVMHMHNAF----------EPELLDKNAKIIVPSQFLKKFYEER----LP------NADISIV 166 (380)
T ss_pred HHHHh------hCCCCCEEEEEeccc----------ChhHhccCCEEEEcCHHHHHHHHhh----CC------CCCEEEe
Confidence 11221 1233455 5565432 2234557899999999999988752 12 2278999
Q ss_pred cCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CC
Q 008028 323 VNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GN 400 (580)
Q Consensus 323 ~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~ 400 (580)
+||+|...|.+.. +..++++++++ ++.++|+|+||+.+.||++.|++|+.++.+ ++
T Consensus 167 pngvd~~~~~~~~--------------------~~~~~~~~~~~--~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~ 224 (380)
T PRK15484 167 PNGFCLETYQSNP--------------------QPNLRQQLNIS--PDETVLLYAGRISPDKGILLLMQAFEKLATAHSN 224 (380)
T ss_pred cCCCCHHHcCCcc--------------------hHHHHHHhCCC--CCCeEEEEeccCccccCHHHHHHHHHHHHHhCCC
Confidence 9999988776542 34456777775 345789999999999999999999999865 78
Q ss_pred eEEEEEecCC-------hhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCC-CCccHHHHHHHHcCCce
Q 008028 401 VQIVVLGTGK-------KPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRF-EPCGLIQLHAMRYGTVP 472 (580)
Q Consensus 401 v~lii~G~g~-------~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~-E~~g~~~lEAma~G~Pv 472 (580)
++|+|+|+|. ..+.+.++++..+++.++.+.+..+.+.+..+|+.||++++||.+ |+||++++|||+||+|+
T Consensus 225 ~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PV 304 (380)
T PRK15484 225 LKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPV 304 (380)
T ss_pred eEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCE
Confidence 9999999874 235667777777777788888877778888899999999999986 99999999999999999
Q ss_pred EEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHH
Q 008028 473 IVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWE 549 (580)
Q Consensus 473 I~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~ 549 (580)
|+|+.||..|++.++.+|+++ +++.|+++++++|.+++++ ++ +.+|++++ +.++|||+.++++|+
T Consensus 305 I~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~d--~~-~~~~~~~ar~~~~~~fsw~~~a~~~~ 372 (380)
T PRK15484 305 LASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLAD--PE-LTQIAEQAKDFVFSKYSWEGVTQRFE 372 (380)
T ss_pred EEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHcC--HH-HHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999999954 3789999999999999997 43 34566655 457999999999999
Q ss_pred HHHHHHH
Q 008028 550 KMLLSME 556 (580)
Q Consensus 550 ~~~~~l~ 556 (580)
++|++..
T Consensus 373 ~~l~~~~ 379 (380)
T PRK15484 373 EQIHNWF 379 (380)
T ss_pred HHHHHhc
Confidence 9998753
No 21
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=1.1e-33 Score=313.91 Aligned_cols=302 Identities=17% Similarity=0.176 Sum_probs=210.2
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceEEEcCCCCC--C----CCC----c------cchHHHHHHhcCceeE
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCRPRYDK--P----VKG----R------KINWMKAGILESDRVL 290 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~~~~~--~----~~~----~------~~~~~~~~~~~ad~vi 290 (580)
+|| |||+|.|.+++++..++...+.+-+ .+.|.... . ... . .+.-...++..||.|+
T Consensus 385 ~pD-lIHahy~d~glva~lla~~lgVP~v------~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~II 457 (784)
T TIGR02470 385 KPD-LIIGNYSDGNLVASLLARKLGVTQC------TIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFII 457 (784)
T ss_pred CCC-EEEECCCchHHHHHHHHHhcCCCEE------EECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEE
Confidence 489 9999999999999888877654322 33331100 0 000 0 1111345677899999
Q ss_pred eeCHHHHH----HHHc---cc----------cCCcchhhhhhcCCeeEecCCCCCCCcCCCCccc--cccccCchhhhcc
Q 008028 291 TVSPHYAK----ELIS---GE----------EKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRY--INVNYDATTVMNA 351 (580)
Q Consensus 291 ~vS~~~~~----~l~~---~~----------~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~--l~~~~~~~~~~~~ 351 (580)
+.|..... .+.+ +. --|++. ...|+.+|++|+|...|.|...+. +..... -.+.
T Consensus 458 tsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~----~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~---~ie~ 530 (784)
T TIGR02470 458 TSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV----FDPKFNIVSPGADESIYFPYSDKEKRLTNLHP---EIEE 530 (784)
T ss_pred ECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC----CcCCeEEECCCcChhhcCCCCchhhhhhhhhc---chhh
Confidence 99975422 1111 00 012211 123889999999998887754320 000000 0000
Q ss_pred chHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCCh----------hhHHHHHH
Q 008028 352 KPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKK----------PMEQQIEQ 419 (580)
Q Consensus 352 ~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~----------~~~~~i~~ 419 (580)
--.++...++.+|+..+++.++|+++||+.+.||++.|++|+.++.. ++++|+|+|++.. ...+.+.+
T Consensus 531 ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~ 610 (784)
T TIGR02470 531 LLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHN 610 (784)
T ss_pred hccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHH
Confidence 00123455677888767888999999999999999999999987643 5799999998642 13456666
Q ss_pred HHHHCC--CCeeEeccC-ChHHHHHHH---h-cCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEE
Q 008028 420 LEIICP--EKARGITKF-STPLAHKII---A-GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQ 492 (580)
Q Consensus 420 l~~~~~--~~v~~~~~~-~~~~~~~~~---~-~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~ 492 (580)
+..+++ ++|.+.+.. +......++ + ++|++++||++|+||++++|||+||+|||+|+.||..|++.++.+|++
T Consensus 611 la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfL 690 (784)
T TIGR02470 611 LIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFH 690 (784)
T ss_pred HHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEE
Confidence 777665 577776643 222222233 3 568999999999999999999999999999999999999999999999
Q ss_pred EeecccccccCCcccHHHHHHHHHHHHHh--cChhHHHHHHHHHH---HhcCCchHHHHHHHHHH
Q 008028 493 MRSFHVECDRVDLADVAAIAKHVNRAVAT--YGTPALKEMIQNCM---ALDLSWKEPARLWEKML 552 (580)
Q Consensus 493 ~~~~~~~~~~v~~~d~~~la~~l~~ll~~--~~~~~~~~~~~~~~---~~~fs~~~~a~~~~~~~ 552 (580)
+ ++.|+++++++|.++++. .+++.|.+|+++++ .++|||+.++++++++.
T Consensus 691 V----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 691 I----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred e----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 8 999999999999998741 13677888888774 47899999999998875
No 22
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=3.9e-33 Score=294.74 Aligned_cols=356 Identities=19% Similarity=0.173 Sum_probs=244.1
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCC-ccccccCCcEEEEEEeCCeEEEEEEEEEEecCee
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYD-QYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVD 163 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (580)
.||++|.... ..||.+.++.+|+++|.+.||++++++.... .+.. .....|+.
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~----------------------~~~~~~i~ 55 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRK----------------------RIQRPDVA 55 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHH----------------------HHHhcCce
Confidence 4899998763 2699999999999999999999999985421 1000 00112444
Q ss_pred EEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHH
Q 008028 164 RVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLP 243 (580)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~ 243 (580)
++.+..... . . + .+.....+.++.. +|| |+|+|..++. .+
T Consensus 56 ~~~~~~~~~----------~------------~---~-~~~~~l~~~l~~~------------~~D-ivh~~~~~~~-~~ 95 (374)
T TIGR03088 56 FYALHKQPG----------K------------D---V-AVYPQLYRLLRQL------------RPD-IVHTRNLAAL-EA 95 (374)
T ss_pred EEEeCCCCC----------C------------C---h-HHHHHHHHHHHHh------------CCC-EEEEcchhHH-HH
Confidence 443321100 0 0 0 1122233344333 599 8999865332 22
Q ss_pred HHHHHhhhccCccccceEEEcCCCCCCC---CCccchHHHH-HHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCe
Q 008028 244 CYLKFMYQSKGIHKNAKRLCRPRYDKPV---KGRKINWMKA-GILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGI 319 (580)
Q Consensus 244 ~~l~~~~~~~gi~~~~~~~~l~~~~~~~---~~~~~~~~~~-~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i 319 (580)
..+.... ++. ..+++.|++.... ......+++. ..+.+|.++++|+...+.+.+. .+++.+ ++
T Consensus 96 ~~~~~~~---~~~--~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vs~~~~~~~~~~--~~~~~~------~~ 162 (374)
T TIGR03088 96 QLPAALA---GVP--ARIHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDLEDWLRGP--VKVPPA------KI 162 (374)
T ss_pred HHHHHhc---CCC--eEEEeecCcccccchhhHHHHHHHHHHHHhcCCeEEEeCHHHHHHHHHh--cCCChh------hE
Confidence 2222222 111 1223333321111 1111233333 4457999999999999988762 344444 88
Q ss_pred eEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC-
Q 008028 320 SGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG- 398 (580)
Q Consensus 320 ~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~- 398 (580)
.+|+||+|.+.|.+.... +...+++...+ .+.++|+|+||+.++||++.+++++.++.+
T Consensus 163 ~vi~ngvd~~~~~~~~~~------------------~~~~~~~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 222 (374)
T TIGR03088 163 HQIYNGVDTERFHPSRGD------------------RSPILPPDFFA--DESVVVGTVGRLQAVKDQPTLVRAFALLVRQ 222 (374)
T ss_pred EEeccCccccccCCCccc------------------hhhhhHhhcCC--CCCeEEEEEecCCcccCHHHHHHHHHHHHHh
Confidence 999999999888665321 12222222222 356899999999999999999999998854
Q ss_pred -----CCeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCc
Q 008028 399 -----GNVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTV 471 (580)
Q Consensus 399 -----~~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~P 471 (580)
++++|+++|+|. ..+.++++..+++ +.+.+.+ + ......+++.||++++||.+|++|++++|||+||+|
T Consensus 223 ~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~-~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~P 298 (374)
T TIGR03088 223 LPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG-E-RDDVPALMQALDLFVLPSLAEGISNTILEAMASGLP 298 (374)
T ss_pred CcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC-C-cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCC
Confidence 279999999987 3455666655543 3354444 3 334567999999999999999999999999999999
Q ss_pred eEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHH
Q 008028 472 PIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLW 548 (580)
Q Consensus 472 vI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~ 548 (580)
+|+|+.||..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++++++ +.+.|||+.++++|
T Consensus 299 vv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~ 366 (374)
T TIGR03088 299 VIATAVGGNPELVQHGVTGALV----------PPGDAVALARALQPYVSD--PAARRAHGAAGRARAEQQFSINAMVAAY 366 (374)
T ss_pred EEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999999999998 999999999999999986 55566666554 55799999999999
Q ss_pred HHHHHHH
Q 008028 549 EKMLLSM 555 (580)
Q Consensus 549 ~~~~~~l 555 (580)
+++|+++
T Consensus 367 ~~~y~~~ 373 (374)
T TIGR03088 367 AGLYDQL 373 (374)
T ss_pred HHHHHHh
Confidence 9999876
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.6e-32 Score=292.68 Aligned_cols=227 Identities=15% Similarity=0.162 Sum_probs=181.0
Q ss_pred HHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHH
Q 008028 281 AGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQ 360 (580)
Q Consensus 281 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 360 (580)
..++.+|.++++|+..++.+.+.+ ..++.+|+||+|.+.|.|.... ....+
T Consensus 152 ~~~~~ad~vi~~s~~~~~~~~~~~-----------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~~ 202 (396)
T cd03818 152 LALAQADAGVSPTRWQRSTFPAEL-----------RSRISVIHDGIDTDRLRPDPQA------------------RLRLP 202 (396)
T ss_pred HHHHhCCEEECCCHHHHhhCcHhh-----------ccceEEeCCCccccccCCCchh------------------hhccc
Confidence 567899999999999988876411 1289999999999988765321 11111
Q ss_pred HHcCCCCCCCCcEEEEEcc-CccccCHHHHHHHHhhhcC--CCeEEEEEecCCh-----------hhHHHHHHHHHHC-C
Q 008028 361 SQLGLPVDRNIPLIGFIGR-LEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKK-----------PMEQQIEQLEIIC-P 425 (580)
Q Consensus 361 ~~~glp~~~~~~~i~f~Gr-l~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~-----------~~~~~i~~l~~~~-~ 425 (580)
....+ .++.++|+|+|| +.+.||++.+++|+.++.+ ++++|+|+|+++. ..++.++++..+. .
T Consensus 203 ~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 280 (396)
T cd03818 203 NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDL 280 (396)
T ss_pred ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCc
Confidence 11222 245679999998 9999999999999998865 7999999997431 1233445554322 2
Q ss_pred CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCc
Q 008028 426 EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDL 505 (580)
Q Consensus 426 ~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~ 505 (580)
+++.+.+..+.+....+|+.||++++||..|++|++++|||+||+|||+|+.||..|++.++.+|+++ ++
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~~ 350 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------DF 350 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------CC
Confidence 56888888777888889999999999999999999999999999999999999999999999999997 99
Q ss_pred ccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHH
Q 008028 506 ADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEK 550 (580)
Q Consensus 506 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~ 550 (580)
.|+++++++|.+++++ ++.+.+|++++ +.+.|||+.++++|++
T Consensus 351 ~d~~~la~~i~~ll~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 351 FDPDALAAAVIELLDD--PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 9999999999999997 66666776665 4467999999999863
No 24
>PLN00142 sucrose synthase
Probab=100.00 E-value=2.5e-32 Score=303.13 Aligned_cols=312 Identities=17% Similarity=0.138 Sum_probs=211.9
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EE--cC-CCC--CCCCC----ccchHHHHHHhcCceeEeeCHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LC--RP-RYD--KPVKG----RKINWMKAGILESDRVLTVSPHY 296 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~--l~-~~~--~~~~~----~~~~~~~~~~~~ad~vi~vS~~~ 296 (580)
+|| |||+|.|.+++++..++...+.+-+...+.+ -. .+ +.. ..... ..+.-...++..||.|++.|...
T Consensus 408 ~PD-lIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qE 486 (815)
T PLN00142 408 KPD-LIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQE 486 (815)
T ss_pred CCC-EEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHH
Confidence 489 9999999999999999887654333222222 00 00 000 00000 11334566778999999999866
Q ss_pred HHH-------HHccccCCcc-hhhhh-----hcCCeeEecCCCCCCCcCCCCcc--ccccccCchhhhccchHHHHHHHH
Q 008028 297 AKE-------LISGEEKGVE-LDNII-----RKTGISGIVNGMDVQEWNPSTDR--YINVNYDATTVMNAKPLVKEALQS 361 (580)
Q Consensus 297 ~~~-------l~~~~~~g~~-~~~~~-----~~~~i~~I~NGvd~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~ 361 (580)
... +.++..++.+ +-.++ -..++.+|++|+|...|.|...+ .+..-++.- .....++...++
T Consensus 487 i~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I---~~~l~~~~~~~e 563 (815)
T PLN00142 487 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSI---EELLYSPEQNDE 563 (815)
T ss_pred HhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccc---hhhcCChHHHHH
Confidence 542 2222111111 00111 02288999999999988875421 110000000 011112334456
Q ss_pred HcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCC-h------hh---HHHHHHHHHHCC--CC
Q 008028 362 QLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGK-K------PM---EQQIEQLEIICP--EK 427 (580)
Q Consensus 362 ~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~-~------~~---~~~i~~l~~~~~--~~ 427 (580)
.+|++.+++.++|+++||+.++||++.|++|+.++.+ ++++|+|+|++. . +. .+.+.++..+++ ++
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~ 643 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQ 643 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCc
Confidence 7787666778899999999999999999999988754 579999999872 1 11 134556666654 56
Q ss_pred eeEeccCCh----HHHHHHHh-cCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeeccccccc
Q 008028 428 ARGITKFST----PLAHKIIA-GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDR 502 (580)
Q Consensus 428 v~~~~~~~~----~~~~~~~~-~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~ 502 (580)
+.+.+.... ..+..+++ .+|++++||++|+||++++|||+||+|||+|+.||..|++.++.+|+++
T Consensus 644 V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV--------- 714 (815)
T PLN00142 644 FRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHI--------- 714 (815)
T ss_pred EEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe---------
Confidence 776654221 23333455 5899999999999999999999999999999999999999999999998
Q ss_pred CCcccHHHHHHHHHHHHHh--cChhHHHHHHHHH---HHhcCCchHHHHHHHHHH
Q 008028 503 VDLADVAAIAKHVNRAVAT--YGTPALKEMIQNC---MALDLSWKEPARLWEKML 552 (580)
Q Consensus 503 v~~~d~~~la~~l~~ll~~--~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~ 552 (580)
++.|+++++++|.++++. .+++.|.+|++++ +.++|||+.++++++++.
T Consensus 715 -~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 715 -DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred -CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999887641 1267788888877 346899999999998864
No 25
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=5.7e-32 Score=287.08 Aligned_cols=356 Identities=23% Similarity=0.253 Sum_probs=248.9
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEEEecCccchhhhccC
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRVFVDHPVFLEKVWGK 179 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~ 179 (580)
.||.+.++.+|+++|+++||+|+|++...+...... .....++.++.+.......
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~----- 74 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRVVRVPAGPAEY----- 74 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEEEecccccccC-----
Confidence 699999999999999999999999997643211100 0112344444443211100
Q ss_pred CCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHHHHHhhhccCccccc
Q 008028 180 TGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNA 259 (580)
Q Consensus 180 ~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~ 259 (580)
... ... ......+.......++.... +|| ++|+|.+.+++++..++.....+-
T Consensus 75 ----~~~----~~~---~~~~~~~~~~~~~~~~~~~~----------~~D-iv~~~~~~~~~~~~~~~~~~~~~~----- 127 (398)
T cd03800 75 ----LPK----EEL---WPYLDEFADDLLRFLRREGG----------RPD-LIHAHYWDSGLVALLLARRLGIPL----- 127 (398)
T ss_pred ----CCh----hhc---chhHHHHHHHHHHHHHhcCC----------Ccc-EEEEecCccchHHHHHHhhcCCce-----
Confidence 000 000 00011123333333333211 489 899998888877776665543221
Q ss_pred eEEEcCCCCCCCC-----------CccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCC
Q 008028 260 KRLCRPRYDKPVK-----------GRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDV 328 (580)
Q Consensus 260 ~~~~l~~~~~~~~-----------~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~ 328 (580)
+++.|....... ......++..++.+|.++++|+...+.+.+.+ +.+ ..++.+|+||+|.
T Consensus 128 -i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~--~~~------~~~~~vi~ng~~~ 198 (398)
T cd03800 128 -VHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLY--GAY------PRRIRVVPPGVDL 198 (398)
T ss_pred -EEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHc--ccc------ccccEEECCCCCc
Confidence 134342211100 11123456678899999999999988887621 222 1268999999999
Q ss_pred CCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEE
Q 008028 329 QEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVL 406 (580)
Q Consensus 329 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~ 406 (580)
..|.+.... ...++..+.+ ++.++|+|+||+.+.||++.+++++..+.+ ++++|+++
T Consensus 199 ~~~~~~~~~-------------------~~~~~~~~~~--~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~ 257 (398)
T cd03800 199 ERFTPYGRA-------------------EARRARLLRD--PDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIV 257 (398)
T ss_pred cceecccch-------------------hhHHHhhccC--CCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 888665321 1113444443 456899999999999999999999999875 58999999
Q ss_pred ecCChh----hHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCc
Q 008028 407 GTGKKP----MEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL 480 (580)
Q Consensus 407 G~g~~~----~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~ 480 (580)
|++... ....++.+..+++ .++.+.+..+...+..+++.||++++||..|++|++++|||++|+|+|+++.+|.
T Consensus 258 G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~ 337 (398)
T cd03800 258 GGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGP 337 (398)
T ss_pred ECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCCH
Confidence 987632 2334555555443 4688888877888888999999999999999999999999999999999999999
Q ss_pred ceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHH
Q 008028 481 FDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWE 549 (580)
Q Consensus 481 ~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~ 549 (580)
.+++.++.+|+++ ++.|+++++++|.+++++ ++.+.+|.+++ +.++|||+.++++|+
T Consensus 338 ~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 338 RDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD--PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999999999998 999999999999999987 67777787776 347999999999986
No 26
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=1.9e-31 Score=276.30 Aligned_cols=329 Identities=19% Similarity=0.204 Sum_probs=232.5
Q ss_pred ceEEEEeecccC--ccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCe
Q 008028 85 MNLVFVGAEVAP--WSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGV 162 (580)
Q Consensus 85 mkI~~vs~e~~P--~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (580)
|||++|+..+.| ....||.++++.+|+++|.++||+|+++++..+.... ....
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~-------------------~~~~------ 55 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAA-------------------PLVP------ 55 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCccc-------------------ceee------
Confidence 899999998744 2237999999999999999999999999986421110 0000
Q ss_pred eEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchH
Q 008028 163 DRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALL 242 (580)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l 242 (580)
. ....... ++...............+.++.. +|| |+|+|.+...++
T Consensus 56 -~--~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~------------~~D-ivh~~~~~~~~~ 101 (335)
T cd03802 56 -V--VPEPLRL------------------DAPGRDRAEAEALALAERALAAG------------DFD-IVHNHSLHLPLP 101 (335)
T ss_pred -c--cCCCccc------------------ccchhhHhhHHHHHHHHHHHhcC------------CCC-EEEecCcccchh
Confidence 0 0000000 00000011111122222222222 589 899998877655
Q ss_pred HHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeE
Q 008028 243 PCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISG 321 (580)
Q Consensus 243 ~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~ 321 (580)
+... ...++ +++|+........ ........+.++++|+...+.+... .++.+
T Consensus 102 ---~~~~-------~~~~~v~~~h~~~~~~~~~----~~~~~~~~~~~~~~s~~~~~~~~~~-------------~~~~v 154 (335)
T cd03802 102 ---FARP-------LPVPVVTTLHGPPDPELLK----LYYAARPDVPFVSISDAQRRPWPPL-------------PWVAT 154 (335)
T ss_pred ---hhcc-------cCCCEEEEecCCCCcccch----HHHhhCcCCeEEEecHHHHhhcccc-------------cccEE
Confidence 1111 22344 7777654432222 3445668899999999988876541 28999
Q ss_pred ecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCCCe
Q 008028 322 IVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNV 401 (580)
Q Consensus 322 I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v 401 (580)
|+||+|.+.|.+.. .+...|+|+||+.+.||++.+++++.+. ++
T Consensus 155 i~ngvd~~~~~~~~---------------------------------~~~~~i~~~Gr~~~~Kg~~~li~~~~~~---~~ 198 (335)
T cd03802 155 VHNGIDLDDYPFRG---------------------------------PKGDYLLFLGRISPEKGPHLAIRAARRA---GI 198 (335)
T ss_pred ecCCcChhhCCCCC---------------------------------CCCCEEEEEEeeccccCHHHHHHHHHhc---CC
Confidence 99999998876531 2346899999999999999999998764 79
Q ss_pred EEEEEecCCh--hhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCC-CCccHHHHHHHHcCCceEEcCCC
Q 008028 402 QIVVLGTGKK--PMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRF-EPCGLIQLHAMRYGTVPIVASTG 478 (580)
Q Consensus 402 ~lii~G~g~~--~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~-E~~g~~~lEAma~G~PvI~s~~g 478 (580)
+|+|+|.|.. .+...+.+... ..+++.+.+..+......+++.+|++++||.+ |++|++++|||+||+|||+++.|
T Consensus 199 ~l~i~G~~~~~~~~~~~~~~~~~-~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~ 277 (335)
T cd03802 199 PLKLAGPVSDPDYFYREIAPELL-DGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRG 277 (335)
T ss_pred eEEEEeCCCCHHHHHHHHHHhcc-cCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC
Confidence 9999999862 12222222211 34679998888877778899999999999985 99999999999999999999999
Q ss_pred CcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 008028 479 GLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 479 g~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 553 (580)
|..|++.++.+|+++ ++ +++++++|.++++. . .+..++.+.++|||+.++++|+++|+
T Consensus 278 ~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~---~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 278 AVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--D---RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred CchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--H---HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999997 55 99999999988664 2 13344556789999999999999984
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=1.4e-31 Score=284.37 Aligned_cols=228 Identities=17% Similarity=0.162 Sum_probs=180.8
Q ss_pred HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHH
Q 008028 279 MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEA 358 (580)
Q Consensus 279 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 358 (580)
++..++.+|.++++|+..++.+.+.+ .... ..++.+|+||+|.+.+.+.... .
T Consensus 148 e~~~~~~ad~ii~~s~~~~~~~~~~~-~~~~------~~~~~vi~n~vd~~~~~~~~~~-------------------~- 200 (392)
T cd03805 148 EEFTTGMADKIVVNSNFTASVFKKTF-PSLA------KNPREVVYPCVDTDSFESTSED-------------------P- 200 (392)
T ss_pred HHHHhhCceEEEEcChhHHHHHHHHh-cccc------cCCcceeCCCcCHHHcCccccc-------------------c-
Confidence 34567889999999999999887522 1111 1144699999998887664321 0
Q ss_pred HHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC-----CCeEEEEEecCCh------hhHHHHHHHHHH-C--
Q 008028 359 LQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG-----GNVQIVVLGTGKK------PMEQQIEQLEII-C-- 424 (580)
Q Consensus 359 ~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~-----~~v~lii~G~g~~------~~~~~i~~l~~~-~-- 424 (580)
.++.... .++.++|+++||+.+.||++.++++++++.+ ++++|+|+|+|+. .+.+.++++..+ .
T Consensus 201 ~~~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l 278 (392)
T cd03805 201 DPGLLIP--KSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLL 278 (392)
T ss_pred ccccccc--CCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCC
Confidence 1111122 2456899999999999999999999999864 4899999999763 234566666665 3
Q ss_pred CCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCC
Q 008028 425 PEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVD 504 (580)
Q Consensus 425 ~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~ 504 (580)
.+++.+.+..+......+++.||++++||..|++|++++|||+||+|||+|+.||..|++.++.+|+++ +
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~----------~ 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC----------E 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------C
Confidence 357999888888888889999999999999999999999999999999999999999999999999986 6
Q ss_pred cccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHH
Q 008028 505 LADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLW 548 (580)
Q Consensus 505 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~ 548 (580)
+ |+++++++|.+++++ ++.+.+|++++ +.++|||+.+++++
T Consensus 349 ~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 349 P-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred C-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 5 899999999999997 55666776665 55789999998763
No 28
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=6e-31 Score=278.07 Aligned_cols=275 Identities=17% Similarity=0.154 Sum_probs=196.9
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHcccc
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEE 305 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~ 305 (580)
+|| |+|+|+++...++...+ . . ..++ ++.|............+++..++.+|.+++.|+... .
T Consensus 85 ~~D-vv~~h~~~~~~~~~~~~-~---~----~~~~i~~~H~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~----~--- 148 (372)
T cd03792 85 DAD-VVVIHDPQPLALPLFKK-K---R----GRPWIWRCHIDLSSPNRRVWDFLQPYIEDYDAAVFHLPEYV----P--- 148 (372)
T ss_pred CCC-EEEECCCCchhHHHhhh-c---C----CCeEEEEeeeecCCCcHHHHHHHHHHHHhCCEEeecHHHhc----C---
Confidence 589 89999887433322221 1 0 2233 455533222112233456777889999998884322 1
Q ss_pred CCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccC
Q 008028 306 KGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKG 385 (580)
Q Consensus 306 ~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg 385 (580)
.+++.. ++ +||||+|........ + .+.....++++++++ ++.++|+++||+.+.||
T Consensus 149 ~~~~~~------~~-vipngvd~~~~~~~~-------~--------~~~~~~~~~~~~~~~--~~~~~i~~vgrl~~~Kg 204 (372)
T cd03792 149 PQVPPR------KV-IIPPSIDPLSGKNRE-------L--------SPADIEYILEKYGID--PERPYITQVSRFDPWKD 204 (372)
T ss_pred CCCCCc------eE-EeCCCCCCCccccCC-------C--------CHHHHHHHHHHhCCC--CCCcEEEEEeccccccC
Confidence 222221 45 999999964311110 0 111245667788885 45689999999999999
Q ss_pred HHHHHHHHhhhcC--CCeEEEEEecCCh---hhHHHHHHHHH--HCCCCeeEeccC--ChHHHHHHHhcCCEEEecCCCC
Q 008028 386 SDILAQAIPKFMG--GNVQIVVLGTGKK---PMEQQIEQLEI--ICPEKARGITKF--STPLAHKIIAGADFMLVPSRFE 456 (580)
Q Consensus 386 ~~~ll~a~~~l~~--~~v~lii~G~g~~---~~~~~i~~l~~--~~~~~v~~~~~~--~~~~~~~~~~~aDi~l~ps~~E 456 (580)
++.++++++.+.+ ++++|+|+|+|+. +..+.++++.. ...+++.+.+.. +...+..+++.||++++||.+|
T Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~E 284 (372)
T cd03792 205 PFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIRE 284 (372)
T ss_pred cHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCcc
Confidence 9999999998865 6899999999852 22333444442 233457776655 6677788999999999999999
Q ss_pred CccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH--
Q 008028 457 PCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC-- 534 (580)
Q Consensus 457 ~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~-- 534 (580)
+||++++|||+||+|+|+|+.+|..+++.++.+|+++ + +.++++++|.+++.+ ++.+.+|++++
T Consensus 285 g~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~--~~~~~a~~i~~ll~~--~~~~~~~~~~a~~ 350 (372)
T cd03792 285 GFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D--TVEEAAVRILYLLRD--PELRRKMGANARE 350 (372)
T ss_pred CCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C--CcHHHHHHHHHHHcC--HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986 4 466888899999986 66677777765
Q ss_pred -HHhcCCchHHHHHHHHHHHHH
Q 008028 535 -MALDLSWKEPARLWEKMLLSM 555 (580)
Q Consensus 535 -~~~~fs~~~~a~~~~~~~~~l 555 (580)
+.++|||+.++++|+++|+++
T Consensus 351 ~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 351 HVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHcCHHHHHHHHHHHHHhC
Confidence 447899999999999999863
No 29
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=1.4e-31 Score=284.45 Aligned_cols=373 Identities=14% Similarity=0.088 Sum_probs=231.5
Q ss_pred CCceEEEEeecccCccccccHHHHhccchHHHHhCC-CeEEEEEecCCcccc--ccCCcEEEEEEeCCeEEEEEEEEEEe
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARG-HRVMSVAPRYDQYKD--AWDTSVLAEVKVGDSIETVRFFHCYK 159 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G-~~V~vi~~~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (580)
+.|||++|+..|+|+ .+|+...+..++..|.++| |+|++|.|.++.-.+ -++....+..+.. ....++-|.
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~-~e~~~~~~~--- 76 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSE-QEAYVRQWL--- 76 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchh-hhhhhhhhc---
Confidence 469999999999999 7999999999999999999 799999998752211 1111111111110 011111110
Q ss_pred cCeeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecC-Cc
Q 008028 160 RGVDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGND-WH 238 (580)
Q Consensus 160 ~gv~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~-~~ 238 (580)
+-.++++....+ ..|.+..+.+ .+..+......+.++.+ +|| |||+|+ ++
T Consensus 77 -~~~v~r~~s~~~----------p~yp~r~~~~-----~r~~~~~~~i~~~l~~~------------~pD-VIHv~tP~~ 127 (462)
T PLN02846 77 -EERISFLPKFSI----------KFYPGKFSTD-----KRSILPVGDISETIPDE------------EAD-IAVLEEPEH 127 (462)
T ss_pred -cCeEEEeccccc----------ccCccccccc-----ccccCChHHHHHHHHhc------------CCC-EEEEcCchh
Confidence 011111111110 1121100000 01111122333444433 599 788874 34
Q ss_pred cchHHHHHHHhhhccCccccceEEEcCCCCCCC----C----Cc-cchHHHHHH--hcCceeEeeCHHHHHHHHccccCC
Q 008028 239 TALLPCYLKFMYQSKGIHKNAKRLCRPRYDKPV----K----GR-KINWMKAGI--LESDRVLTVSPHYAKELISGEEKG 307 (580)
Q Consensus 239 ~~~l~~~l~~~~~~~gi~~~~~~~~l~~~~~~~----~----~~-~~~~~~~~~--~~ad~vi~vS~~~~~~l~~~~~~g 307 (580)
.+++.. .+..... ....+.+.|.....+ . .. ...++...+ ..+|.++++|....+ +.+
T Consensus 128 LG~~~~-g~~~~~k----~~~vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~----- 196 (462)
T PLN02846 128 LTWYHH-GKRWKTK----FRLVIGIVHTNYLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPR----- 196 (462)
T ss_pred hhhHHH-HHHHHhc----CCcEEEEECCChHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-Hhh-----
Confidence 444310 1221111 122224445322111 1 00 111111222 248999999985544 543
Q ss_pred cchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHH
Q 008028 308 VELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSD 387 (580)
Q Consensus 308 ~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~ 387 (580)
.+...+||||...|.+.... +++..+ +.+.-.+.++|+||+.+.||++
T Consensus 197 ----------~~i~~v~GVd~~~f~~~~~~---------------------~~~~~~-~~~~~~~~~l~vGRL~~eK~~~ 244 (462)
T PLN02846 197 ----------SIICNVHGVNPKFLEIGKLK---------------------LEQQKN-GEQAFTKGAYYIGKMVWSKGYK 244 (462)
T ss_pred ----------CEEecCceechhhcCCCccc---------------------HhhhcC-CCCCcceEEEEEecCcccCCHH
Confidence 33445689999988766321 122222 2222134799999999999999
Q ss_pred HHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHH
Q 008028 388 ILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHA 465 (580)
Q Consensus 388 ~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEA 465 (580)
.|++++.++.+ ++++|+|+|+|+ .++.++++..+.+..+.++..+.... .+++.+|++|+||..|++|++++||
T Consensus 245 ~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~~--~~~~~~DvFv~pS~~Et~g~v~lEA 320 (462)
T PLN02846 245 ELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHAD--PLFHDYKVFLNPSTTDVVCTTTAEA 320 (462)
T ss_pred HHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCHH--HHHHhCCEEEECCCcccchHHHHHH
Confidence 99999998865 689999999998 46667777776654344444554332 5899999999999999999999999
Q ss_pred HHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHH
Q 008028 466 MRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPA 545 (580)
Q Consensus 466 ma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a 545 (580)
||||+|||+++.++ .+++.++.+|+.+ .|.+++++++..++++. +.. +..+ ..+.|||+..+
T Consensus 321 mA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~l~~~-~~~---~~~~-a~~~~SWe~~~ 382 (462)
T PLN02846 321 LAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKALAEE-PAP---LTDA-QRHELSWEAAT 382 (462)
T ss_pred HHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHHHccC-chh---HHHH-HHHhCCHHHHH
Confidence 99999999999998 5999999999975 57899999999999862 222 2222 33589999999
Q ss_pred HHHHHHHHHH
Q 008028 546 RLWEKMLLSM 555 (580)
Q Consensus 546 ~~~~~~~~~l 555 (580)
+++++.|+--
T Consensus 383 ~~l~~~~~~~ 392 (462)
T PLN02846 383 ERFLRVADLD 392 (462)
T ss_pred HHHHHHhccC
Confidence 9999999743
No 30
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.9e-31 Score=280.64 Aligned_cols=347 Identities=15% Similarity=0.151 Sum_probs=234.5
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhC--CCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAAR--GHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGV 162 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~--G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (580)
|||++++.. .|. .||.+.++.+++++|.++ ||+|.++++....... |.. ...... ....+
T Consensus 1 mkI~~~~~~-~~~--~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~-~~~-------------~~~~~~-~~~~~ 62 (359)
T PRK09922 1 MKIAFIGEA-VSG--FGGMETVISNVINTFEESKINCEMFFFCRNDKMDKA-WLK-------------EIKYAQ-SFSNI 62 (359)
T ss_pred CeeEEeccc-ccC--CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChH-HHH-------------hcchhc-ccccc
Confidence 899999875 443 599999999999999999 8999999885421110 000 000000 00000
Q ss_pred eEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchH
Q 008028 163 DRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALL 242 (580)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l 242 (580)
.+.+ +. ... ......+.++.. +|| |+|+|+....++
T Consensus 63 ~~~~------------------~~---------~~~----~~~~l~~~l~~~------------~~D-ii~~~~~~~~~~ 98 (359)
T PRK09922 63 KLSF------------------LR---------RAK----HVYNFSKWLKET------------QPD-IVICIDVISCLY 98 (359)
T ss_pred hhhh------------------hc---------ccH----HHHHHHHHHHhc------------CCC-EEEEcCHHHHHH
Confidence 0000 00 000 111122333332 599 889987655554
Q ss_pred HHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeE
Q 008028 243 PCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISG 321 (580)
Q Consensus 243 ~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~ 321 (580)
+..++...+.+ ..+ .+.|..... ... .....+..+|.++++|+...+.+.+ .|++.+ ++.+
T Consensus 99 ~~~~~~~~~~~-----~~~~~~~h~~~~~--~~~--~~~~~~~~~d~~i~~S~~~~~~~~~---~~~~~~------ki~v 160 (359)
T PRK09922 99 ANKARKKSGKQ-----FKIFSWPHFSLDH--KKH--AECKKITCADYHLAISSGIKEQMMA---RGISAQ------RISV 160 (359)
T ss_pred HHHHHHHhCCC-----CeEEEEecCcccc--cch--hhhhhhhcCCEEEEcCHHHHHHHHH---cCCCHH------HEEE
Confidence 44444443221 122 222221111 011 1112247899999999999999986 466554 8999
Q ss_pred ecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCc--cccCHHHHHHHHhhhcCC
Q 008028 322 IVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLE--EQKGSDILAQAIPKFMGG 399 (580)
Q Consensus 322 I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~--~~Kg~~~ll~a~~~l~~~ 399 (580)
|+||+|.+.+..... ...+.++|+|+||+. .+||++.+++++.++. +
T Consensus 161 i~N~id~~~~~~~~~------------------------------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~ 209 (359)
T PRK09922 161 IYNPVEIKTIIIPPP------------------------------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT-G 209 (359)
T ss_pred EcCCCCHHHccCCCc------------------------------ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC-C
Confidence 999999654432110 012457899999996 4699999999999875 4
Q ss_pred CeEEEEEecCChhhHHHHHHHHHHC--CCCeeEeccCCh--HHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEc
Q 008028 400 NVQIVVLGTGKKPMEQQIEQLEIIC--PEKARGITKFST--PLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVA 475 (580)
Q Consensus 400 ~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~~~~~~--~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s 475 (580)
+++|+|+|+|+ ..+.++++..++ ++++.+.+..+. +....+++.||++++||.+|+||++++|||+||+|||+|
T Consensus 210 ~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s 287 (359)
T PRK09922 210 EWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISS 287 (359)
T ss_pred CeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEe
Confidence 89999999997 355666666654 356877765533 566778999999999999999999999999999999999
Q ss_pred C-CCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 008028 476 S-TGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 476 ~-~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~ 554 (580)
+ .||..|++.++.+|+++ +++|+++++++|.++++++ +.+..........+|+-+...+++.++|.+
T Consensus 288 ~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~i~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 288 DCMSGPRDIIKPGLNGELY----------TPGNIDEFVGKLNKVISGE--VKYQHDAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred CCCCChHHHccCCCceEEE----------CCCCHHHHHHHHHHHHhCc--ccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9 89999999999999998 9999999999999999973 321111111234678888999999999887
Q ss_pred HH
Q 008028 555 ME 556 (580)
Q Consensus 555 l~ 556 (580)
++
T Consensus 356 ~~ 357 (359)
T PRK09922 356 KL 357 (359)
T ss_pred Hh
Confidence 75
No 31
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=8.1e-31 Score=279.14 Aligned_cols=214 Identities=13% Similarity=0.085 Sum_probs=156.8
Q ss_pred hcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHc
Q 008028 284 LESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQL 363 (580)
Q Consensus 284 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 363 (580)
+.++.++++|+++++.+.+. .+ ..++.+|+||+|...+.+.... ...+
T Consensus 189 ~~~~~iV~~S~~l~~~~~~~--~~--------~~~i~vI~NGid~~~~~~~~~~-------------------~~~~--- 236 (405)
T PRK10125 189 ALGCQFISPSQHVADAFNSL--YG--------PGRCRIINNGIDMATEAILAEL-------------------PPVR--- 236 (405)
T ss_pred hcCcEEEEcCHHHHHHHHHH--cC--------CCCEEEeCCCcCcccccccccc-------------------cccc---
Confidence 45689999999999988752 22 1289999999997543222110 0000
Q ss_pred CCCCCCCCcEEEEEccC--ccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccC-ChHHHH
Q 008028 364 GLPVDRNIPLIGFIGRL--EEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKF-STPLAH 440 (580)
Q Consensus 364 glp~~~~~~~i~f~Grl--~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~-~~~~~~ 440 (580)
..++.++|+|+||. .+.||++.|++|+.++. ++++|+|+|+|+... ..++.+.+.. +...+.
T Consensus 237 ---~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~~~g~~~~~~~l~ 301 (405)
T PRK10125 237 ---ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVVNHGFETDKRKLM 301 (405)
T ss_pred ---cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceEEecCcCCHHHHH
Confidence 01355789999994 47899999999999874 579999999976321 1235554432 445567
Q ss_pred HHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHH
Q 008028 441 KIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 441 ~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
.+|+.||++++||.+|++|++++|||+||+|||+|+.||..|++.++ +|+++ +++|++++|+.+...+.
T Consensus 302 ~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~~d~~~La~~~~~~~~ 370 (405)
T PRK10125 302 SALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SEEEVLQLAQLSKPEIA 370 (405)
T ss_pred HHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CCCCHHHHHhccCHHHH
Confidence 79999999999999999999999999999999999999999988775 99998 99999999986543332
Q ss_pred hcChhHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 008028 521 TYGTPALKEMIQNCMALDLSWKEPARLWEKMLLSM 555 (580)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 555 (580)
...-....+..++.+.+.|||+.|+++|+++|+++
T Consensus 371 ~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 371 QAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 10000011223444567899999999999999863
No 32
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.2e-30 Score=270.03 Aligned_cols=349 Identities=17% Similarity=0.172 Sum_probs=233.3
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++|+.+++|.. .||.+.++.+++++|.++||+|.|++........ .....|++++
T Consensus 1 ~i~~i~~~~~~~~-~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPAK-YGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCcc-cCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 6999988755543 7999999999999999999999999985321110 0112355655
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.+..+... ....+..-....+...+ .. .++| ++|........+...
T Consensus 58 ~~~~~~~~----------------------~~~~~~~~~~~~~~~~~-~~----------~~~~-~i~~~~~~~~~~~~~ 103 (363)
T cd04955 58 HIPAPEIG----------------------GLGTIIYDILAILHALF-VK----------RDID-HVHALGPAIAPFLPL 103 (363)
T ss_pred EcCCCCcc----------------------chhhhHHHHHHHHHHHh-cc----------CCeE-EEEecCccHHHHHHH
Confidence 54322100 00000011111122221 11 1245 444433332122111
Q ss_pred HHHhhhccCccccceE-EEcCCCCCC--CCC----ccc-hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcC
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKP--VKG----RKI-NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKT 317 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~--~~~----~~~-~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ 317 (580)
++.. +.++ +++|+.... ... ... .+.+..++.+|.++++|+..++.+... +|.+
T Consensus 104 ~~~~--------~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~--~~~~-------- 165 (363)
T cd04955 104 LRLK--------GKKVVVNMDGLEWKRAKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEK--YGRD-------- 165 (363)
T ss_pred HHhc--------CCCEEEEccCcceeecccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHh--cCCC--------
Confidence 2211 2344 555543211 001 111 123556789999999999999998642 3322
Q ss_pred CeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhc
Q 008028 318 GISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFM 397 (580)
Q Consensus 318 ~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~ 397 (580)
. .+|+||+|...+.+. ...++..+++ +...|+|+||+.+.||++.+++++.++.
T Consensus 166 ~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~---~~~~i~~~G~~~~~Kg~~~li~a~~~l~ 219 (363)
T cd04955 166 S-TYIPYGADHVVSSEE----------------------DEILKKYGLE---PGRYYLLVGRIVPENNIDDLIEAFSKSN 219 (363)
T ss_pred C-eeeCCCcChhhcchh----------------------hhhHHhcCCC---CCcEEEEEecccccCCHHHHHHHHHhhc
Confidence 3 899999998765431 1223344543 2347899999999999999999999886
Q ss_pred CCCeEEEEEecCC--hhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCC-CCccHHHHHHHHcCCceEE
Q 008028 398 GGNVQIVVLGTGK--KPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRF-EPCGLIQLHAMRYGTVPIV 474 (580)
Q Consensus 398 ~~~v~lii~G~g~--~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~-E~~g~~~lEAma~G~PvI~ 474 (580)
+ +++|+|+|+|. ..+.+.+.+. ....+++.+.+....+....+++.||++++||.. |++|++++|||+||+|||+
T Consensus 220 ~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~ 297 (363)
T cd04955 220 S-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLA 297 (363)
T ss_pred c-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEE
Confidence 5 89999999974 3344555431 2334578888877777777899999999999998 9999999999999999999
Q ss_pred cCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHH
Q 008028 475 ASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEKM 551 (580)
Q Consensus 475 s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~ 551 (580)
|+.|+..|++.+ +|+.+ ++.|. ++++|.+++++ ++.+.++++++ ..+.|||+.++++|+++
T Consensus 298 s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 361 (363)
T cd04955 298 SDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSAMAKAARERIREKYTWEKIADQYEEL 361 (363)
T ss_pred ecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999998876 67776 66665 99999999997 56666666665 44679999999999998
Q ss_pred HH
Q 008028 552 LL 553 (580)
Q Consensus 552 ~~ 553 (580)
|+
T Consensus 362 y~ 363 (363)
T cd04955 362 YK 363 (363)
T ss_pred hC
Confidence 84
No 33
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=8.1e-31 Score=273.87 Aligned_cols=267 Identities=20% Similarity=0.246 Sum_probs=202.9
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHcccc
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEE 305 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~ 305 (580)
+|| ++|+|.....+.+.++.... ..++ +++|+...... +.+..++.+|.++++|+...+.+.+ .
T Consensus 78 ~~d-ii~~~~~~~~~~~~~~~~~~-------~~~~i~~~h~~~~~~~-----~~~~~~~~~~~vi~~s~~~~~~~~~--~ 142 (355)
T cd03819 78 KVD-IVHARSRAPAWSAYLAARRT-------RPPFVTTVHGFYSVNF-----RYNAIMARGDRVIAVSNFIADHIRE--N 142 (355)
T ss_pred CCC-EEEECCCchhHHHHHHHHhc-------CCCEEEEeCCchhhHH-----HHHHHHHhcCEEEEeCHHHHHHHHH--h
Confidence 599 89998776665555443322 3445 66776543221 4566778999999999999999984 2
Q ss_pred CCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccC
Q 008028 306 KGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKG 385 (580)
Q Consensus 306 ~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg 385 (580)
++++.+ ++.+|+||+|...+.+.... ......+++.++++ ++.++|+|+||+.+.||
T Consensus 143 ~~~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 143 YGVDPD------RIRVIPRGVDLDRFDPGAVP---------------PERILALAREWPLP--KGKPVILLPGRLTRWKG 199 (355)
T ss_pred cCCChh------hEEEecCCccccccCccccc---------------hHHHHHHHHHcCCC--CCceEEEEeeccccccC
Confidence 555544 89999999999888654321 01122356777764 45589999999999999
Q ss_pred HHHHHHHHhhhcC--CCeEEEEEecCCh--hhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecC-CCCCc
Q 008028 386 SDILAQAIPKFMG--GNVQIVVLGTGKK--PMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPS-RFEPC 458 (580)
Q Consensus 386 ~~~ll~a~~~l~~--~~v~lii~G~g~~--~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps-~~E~~ 458 (580)
++.+++++..+.+ ++++|+|+|.+.. .+.+.+.+...+++ +++.+.+. .+....+++.||++++|| ..|++
T Consensus 200 ~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~ 277 (355)
T cd03819 200 QEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAF 277 (355)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCC
Confidence 9999999999976 6899999999863 35555555555443 45777665 444567999999999999 78999
Q ss_pred cHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---H
Q 008028 459 GLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---M 535 (580)
Q Consensus 459 g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~ 535 (580)
|++++|||++|+|+|+++.||..|++.++.+|+++ ++.|+++++++|..++.. +++++.++++++ +
T Consensus 278 ~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~-~~~~~~~~~~~a~~~~ 346 (355)
T cd03819 278 GRTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDAEALAQALDQILSL-LPEGRAKMFAKARMCV 346 (355)
T ss_pred chHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 999999999999766653 255666666655 6
Q ss_pred HhcCCchHH
Q 008028 536 ALDLSWKEP 544 (580)
Q Consensus 536 ~~~fs~~~~ 544 (580)
.++|||+.|
T Consensus 347 ~~~f~~~~~ 355 (355)
T cd03819 347 ETLFSYDRM 355 (355)
T ss_pred HHhhhhccC
Confidence 679999864
No 34
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.7e-30 Score=270.03 Aligned_cols=351 Identities=17% Similarity=0.227 Sum_probs=242.0
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..+ +.||.+.++.+++++|.++||+|++++........... ......
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588887653 36999999999999999999999999875321111000 000000
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.+.... ....+........++++.. +|| |+|+|..++.++..+
T Consensus 54 ~~~~~~------------------------~~~~~~~~~~~~~~~~~~~------------~pd-iv~~~~~~~~~~~~l 96 (360)
T cd04951 54 NLNMSK------------------------NPLSFLLALWKLRKILRQF------------KPD-VVHAHMFHANIFARL 96 (360)
T ss_pred Eecccc------------------------cchhhHHHHHHHHHHHHhc------------CCC-EEEEcccchHHHHHH
Confidence 111000 0000111112223333333 599 899998887766665
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCCCCccc-hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEec
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKI-NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIV 323 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~-~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~ 323 (580)
++... ...++ .+.|.... ..... ...+.....++.++++|+...+.+.+. .+++.+ ++.+||
T Consensus 97 ~~~~~------~~~~~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~------~~~~i~ 160 (360)
T cd04951 97 LRLFL------PSPPLICTAHSKNE--GGRLRMLAYRLTDFLSDLTTNVSKEALDYFIAS--KAFNAN------KSFVVY 160 (360)
T ss_pred HHhhC------CCCcEEEEeeccCc--hhHHHHHHHHHHhhccCceEEEcHHHHHHHHhc--cCCCcc------cEEEEc
Confidence 55432 22233 44443321 11111 222344456888999999999988862 223333 899999
Q ss_pred CCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCe
Q 008028 324 NGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNV 401 (580)
Q Consensus 324 NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v 401 (580)
||+|...+.+... .+..++++++++ ++.++++|+||+.+.||++.+++++.++.+ +++
T Consensus 161 ng~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~ 220 (360)
T cd04951 161 NGIDTDRFRKDPA------------------RRLKIRNALGVK--NDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDI 220 (360)
T ss_pred cccchhhcCcchH------------------HHHHHHHHcCcC--CCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCe
Confidence 9999887765421 145567778875 456899999999999999999999998865 589
Q ss_pred EEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC
Q 008028 402 QIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG 479 (580)
Q Consensus 402 ~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg 479 (580)
+|+|+|+|. ..+.+++...+++ +++.+.+.. ..+..+++.||++++||..|++|++++|||++|+|+|+++.|+
T Consensus 221 ~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~ 296 (360)
T cd04951 221 KLLIAGDGP--LRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGG 296 (360)
T ss_pred EEEEEcCCC--cHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCC
Confidence 999999987 3345555544433 457776643 3455799999999999999999999999999999999999999
Q ss_pred cceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHH--HHHHhcCCchHHHHHHHHHHH
Q 008028 480 LFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQ--NCMALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 480 ~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~--~~~~~~fs~~~~a~~~~~~~~ 553 (580)
..|++.+ +|+.+ ++.|+++++++|.+++++. ++....+.. +.+.+.|||+.++++|+++|.
T Consensus 297 ~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 297 VREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDIIGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred hhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 9999977 78877 8999999999999999651 333333333 346689999999999999996
No 35
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.4e-30 Score=270.28 Aligned_cols=352 Identities=18% Similarity=0.186 Sum_probs=247.7
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..+. .||.+.++..|+++|.+.||+|.+++......... . ....+++++
T Consensus 1 ~i~~i~~~~~----~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~------------------~---~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLD----VGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE------------------E---LEEAGVPVY 55 (365)
T ss_pred CeEEEEeecc----CccHHHHHHHHHHHhhhccceEEEEecCcchhhhH------------------H---HHhcCCeEE
Confidence 6899998753 39999999999999999999999998753211000 0 000244444
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.+..+.... . ........+.++.. +|| ++|+|.++..+....
T Consensus 56 ~~~~~~~~~---------------------~----~~~~~~~~~~~~~~------------~~d-iv~~~~~~~~~~~~~ 97 (365)
T cd03807 56 CLGKRPGRP---------------------D----PGALLRLYKLIRRL------------RPD-VVHTWMYHADLYGGL 97 (365)
T ss_pred EEecccccc---------------------c----HHHHHHHHHHHHhh------------CCC-EEEeccccccHHHHH
Confidence 443221100 0 01112223333332 599 788887777666555
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCC---CCccc-hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCee
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPV---KGRKI-NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGIS 320 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~---~~~~~-~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~ 320 (580)
..... ...++ ++.|+..... ..... .+.+.....+|.++++|+...+.+.+ .|++.+ ++.
T Consensus 98 ~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---~~~~~~------~~~ 162 (365)
T cd03807 98 AARLA------GVPPVIWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---IGYPPK------KIV 162 (365)
T ss_pred HHHhc------CCCcEEEEecCCcccccchhHhHHHHHHHHhccccCeEEeccHHHHHHHHH---cCCChh------hee
Confidence 44431 12334 5555443321 11111 22344556789999999999999886 355544 889
Q ss_pred EecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--
Q 008028 321 GIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG-- 398 (580)
Q Consensus 321 ~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~-- 398 (580)
+++||+|...+.+.... +..++++++++ ++.++|+|+||+.+.||++.+++++.++.+
T Consensus 163 vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~ 222 (365)
T cd03807 163 VIPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFLIGIVARLHPQKDHATLLRAAALLLKKF 222 (365)
T ss_pred EeCCCcCHHhcCCcccc------------------hHHHHHhcCCC--CCCeEEEEecccchhcCHHHHHHHHHHHHHhC
Confidence 99999998877655321 34556778876 456899999999999999999999998865
Q ss_pred CCeEEEEEecCChhhHHHHHHHHH-H--CCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEc
Q 008028 399 GNVQIVVLGTGKKPMEQQIEQLEI-I--CPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVA 475 (580)
Q Consensus 399 ~~v~lii~G~g~~~~~~~i~~l~~-~--~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s 475 (580)
++++|+|+|.+.. ...++.... + ..+++.+.+. ......+++.||++++||..|++|++++|||+||+|+|++
T Consensus 223 ~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~ 298 (365)
T cd03807 223 PNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVAT 298 (365)
T ss_pred CCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEc
Confidence 6899999999863 222222222 2 2345665553 2345679999999999999999999999999999999999
Q ss_pred CCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHH
Q 008028 476 STGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEKML 552 (580)
Q Consensus 476 ~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~ 552 (580)
+.++..+++.+ +|+++ ++.|+++++++|.+++++ ++.+.++.+++ +.+.|||++++++|.++|
T Consensus 299 ~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 364 (365)
T cd03807 299 DVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQALGEAARERIEENFSIEAMVEAYEELY 364 (365)
T ss_pred CCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999987 88887 889999999999999997 56666666655 557899999999999988
Q ss_pred H
Q 008028 553 L 553 (580)
Q Consensus 553 ~ 553 (580)
+
T Consensus 365 ~ 365 (365)
T cd03807 365 R 365 (365)
T ss_pred C
Confidence 4
No 36
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.98 E-value=3.5e-30 Score=269.68 Aligned_cols=223 Identities=21% Similarity=0.273 Sum_probs=181.5
Q ss_pred hcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHc
Q 008028 284 LESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQL 363 (580)
Q Consensus 284 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 363 (580)
..++.++++|+...+.+.+.+ .++ ..++.+|+||+|.+.|.+.. +...++.+
T Consensus 134 ~~~~~~v~~s~~~~~~~~~~~--~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~ 185 (365)
T cd03825 134 DLNLTIVAPSRWLADCARSSS--LFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRL 185 (365)
T ss_pred cCCcEEEehhHHHHHHHHhcc--ccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHh
Confidence 457789999999988887622 122 23899999999998886543 34566777
Q ss_pred CCCCCCCCcEEEEEccCcc--ccCHHHHHHHHhhhcC---CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCC-hH
Q 008028 364 GLPVDRNIPLIGFIGRLEE--QKGSDILAQAIPKFMG---GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFS-TP 437 (580)
Q Consensus 364 glp~~~~~~~i~f~Grl~~--~Kg~~~ll~a~~~l~~---~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~-~~ 437 (580)
+++. +.+++++.|+... .||++.+++++..+.+ ++++++++|.+...... ....++.+.+..+ ..
T Consensus 186 ~~~~--~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~ 256 (365)
T cd03825 186 GLPA--DKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDE 256 (365)
T ss_pred CCCC--CCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHH
Confidence 7763 4467777777765 8999999999999875 78999999998742221 2344677877777 66
Q ss_pred HHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHH
Q 008028 438 LAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNR 517 (580)
Q Consensus 438 ~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ 517 (580)
....+++.||++++||..|++|++++|||+||+|||+++.||..|++.++.+|+++ ++.|+++++++|.+
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~ 326 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEW 326 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHH
Confidence 77789999999999999999999999999999999999999999999999999997 88999999999999
Q ss_pred HHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHHHHH
Q 008028 518 AVATYGTPALKEMIQNC---MALDLSWKEPARLWEKMLLSM 555 (580)
Q Consensus 518 ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l 555 (580)
++++ ++.+.++.+++ +.++|||+.++++|.++|+++
T Consensus 327 l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 327 LLAD--PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHhC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9986 55566666554 557899999999999999863
No 37
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.98 E-value=3.6e-30 Score=270.58 Aligned_cols=262 Identities=20% Similarity=0.241 Sum_probs=205.0
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCCCCCCC--c-------cchHHHHHHhcCceeEeeCHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKG--R-------KINWMKAGILESDRVLTVSPHY 296 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~--~-------~~~~~~~~~~~ad~vi~vS~~~ 296 (580)
+|| |+|+|....++....+.+.. +.++ +++|+.+..... . ...+.+..++.+|.++++|+..
T Consensus 82 ~~d-vvh~~~~~~~~~~~~~~~~~-------~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 82 RPD-LVHAHFGFDGVYALPLARRL-------GVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred CCC-EEEeccCchHHHHHHHHHHc-------CCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 599 89999766665555544332 2233 445532211110 1 1223456678999999999999
Q ss_pred HHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEE
Q 008028 297 AKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGF 376 (580)
Q Consensus 297 ~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f 376 (580)
++.+.+ .|++.+ ++.+++||+|.+.+.+... ..+.++|+|
T Consensus 154 ~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~-------------------------------~~~~~~i~~ 193 (367)
T cd05844 154 RDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP-------------------------------ARRPPRILF 193 (367)
T ss_pred HHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------------------CCCCcEEEE
Confidence 999986 466554 8999999999877765321 124468999
Q ss_pred EccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHH--CCCCeeEeccCChHHHHHHHhcCCEEEec
Q 008028 377 IGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEII--CPEKARGITKFSTPLAHKIIAGADFMLVP 452 (580)
Q Consensus 377 ~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~--~~~~v~~~~~~~~~~~~~~~~~aDi~l~p 452 (580)
+|++.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+ ...++.+.+..+.+.+..+++.||++++|
T Consensus 194 ~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~p 271 (367)
T cd05844 194 VGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQP 271 (367)
T ss_pred EEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEEC
Confidence 9999999999999999999865 689999999886 45566666665 34678888877778888899999999999
Q ss_pred CC------CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhH
Q 008028 453 SR------FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPA 526 (580)
Q Consensus 453 s~------~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~ 526 (580)
|. .|++|++++|||+||+|||+|+.+|..|++.++.+|+++ ++.|+++++++|.+++++ ++.
T Consensus 272 s~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~ 339 (367)
T cd05844 272 SVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PEGDVAALAAALGRLLAD--PDL 339 (367)
T ss_pred cccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CCCCHHHHHHHHHHHHcC--HHH
Confidence 97 499999999999999999999999999999999999998 899999999999999986 666
Q ss_pred HHHHHHHH---HHhcCCchHHHHHHHH
Q 008028 527 LKEMIQNC---MALDLSWKEPARLWEK 550 (580)
Q Consensus 527 ~~~~~~~~---~~~~fs~~~~a~~~~~ 550 (580)
+.+|++++ +.+.|||+.+++++.+
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 66666655 5578999999999875
No 38
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.98 E-value=5.6e-30 Score=284.98 Aligned_cols=279 Identities=13% Similarity=0.119 Sum_probs=196.8
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceEE-EcCCCCCCCCCccchHH----HHHHh--cCceeEeeCHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRL-CRPRYDKPVKGRKINWM----KAGIL--ESDRVLTVSPHYAKE 299 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~-~l~~~~~~~~~~~~~~~----~~~~~--~ad~vi~vS~~~~~~ 299 (580)
+|| |+|+|...+.+++.......+.+ .++ +.|+.........+.+. ...+. .++.++++|...++.
T Consensus 400 kpD-IVH~h~~~a~~lg~lAa~~~gvP------vIv~t~h~~~~~~~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~~~~~ 472 (694)
T PRK15179 400 VPS-VVHIWQDGSIFACALAALLAGVP------RIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVALSSNSQFAAHR 472 (694)
T ss_pred CCc-EEEEeCCcHHHHHHHHHHHcCCC------EEEEEeCCCccccchhHHHHHHHHHHHHHHhcCCeEEEeCcHHHHHH
Confidence 589 89999887777766665543221 222 33432211111111111 11222 344666777777777
Q ss_pred HHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEcc
Q 008028 300 LISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGR 379 (580)
Q Consensus 300 l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Gr 379 (580)
+.+ ..|++.+ +|.+|+||||...|.+.... +.. +..+......+.++|+++||
T Consensus 473 l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~~------------------~~~-~~~~~~~~~~~~~vIg~VGR 525 (694)
T PRK15179 473 YAD--WLGVDER------RIPVVYNGLAPLKSVQDDAC------------------TAM-MAQFDARTSDARFTVGTVMR 525 (694)
T ss_pred HHH--HcCCChh------HEEEECCCcCHHhcCCCchh------------------hHH-HHhhccccCCCCeEEEEEEe
Confidence 765 3566655 89999999998877653210 111 11111111234579999999
Q ss_pred CccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCC
Q 008028 380 LEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRF 455 (580)
Q Consensus 380 l~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~ 455 (580)
+.++||++.+++|+.++.+ ++++|+|+|+|. ..+.++++..+++ ++|.+.+. .. ....+|+.+|++++||.+
T Consensus 526 L~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V~flG~-~~-dv~~ll~aaDv~VlpS~~ 601 (694)
T PRK15179 526 VDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERILFTGL-SR-RVGYWLTQFNAFLLLSRF 601 (694)
T ss_pred CCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcEEEcCC-cc-hHHHHHHhcCEEEecccc
Confidence 9999999999999998854 689999999987 4566666666554 46776654 33 355799999999999999
Q ss_pred CCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCccc--HHHHHHHHHHHHHhcC-hhHHHHHHH
Q 008028 456 EPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLAD--VAAIAKHVNRAVATYG-TPALKEMIQ 532 (580)
Q Consensus 456 E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d--~~~la~~l~~ll~~~~-~~~~~~~~~ 532 (580)
|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++| +++++++|.+++.... .+.+.+.++
T Consensus 602 Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar 671 (694)
T PRK15179 602 EGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTVTAPDVAEALARIHDMCAADPGIARKAA 671 (694)
T ss_pred ccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCCChHHHHHHHHHHHhChhccHHHHHHHH
Confidence 99999999999999999999999999999999999997 7666 4688999988887522 233444444
Q ss_pred HHHHhcCCchHHHHHHHHHHH
Q 008028 533 NCMALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 533 ~~~~~~fs~~~~a~~~~~~~~ 553 (580)
+.+.+.|||+.++++|+++|+
T Consensus 672 ~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 672 DWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 556679999999999999995
No 39
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.97 E-value=2.7e-29 Score=262.14 Aligned_cols=350 Identities=19% Similarity=0.214 Sum_probs=236.7
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||+||+.. +|. .||.+.++.+|+++|++.||+|.+++......... .... . ......
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~--~~~~--------~----------~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSLL--YGGE--------Q----------EVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCccc--CCCc--------c----------cceeee
Confidence 79999875 564 69999999999999999999999998754211100 0000 0 000000
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
. .+ +.. ......+.++.. +|| ++|+|.|...+.+..
T Consensus 58 -~----------------~~----------~~~----~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 93 (366)
T cd03822 58 -V----------------LD----------NPL----DYRRAARAIRLS------------GPD-VVVIQHEYGIFGGEA 93 (366)
T ss_pred -e----------------cC----------Cch----hHHHHHHHHhhc------------CCC-EEEEeeccccccchh
Confidence 0 00 000 011122223222 589 777776544332222
Q ss_pred HHHhhhccCccccceE-EEcCCC-CCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEec
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRY-DKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIV 323 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~-~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~ 323 (580)
....... ......++ +++|+. ..........+.+..++.+|.++++|....+.+.. ... ..++.+|+
T Consensus 94 ~~~~~~~-~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~-------~~~~~~i~ 162 (366)
T cd03822 94 GLYLLLL-LRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLRRADAVIVMSSELLRALLL---RAY-------PEKIAVIP 162 (366)
T ss_pred hHHHHHH-HhhcCCCEEEEEecCCccccchhhhHHHHHHHhcCCEEEEeeHHHHHHHHh---hcC-------CCcEEEeC
Confidence 1111100 01123344 666665 22222223345577788999999997444444432 111 12899999
Q ss_pred CCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCe
Q 008028 324 NGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNV 401 (580)
Q Consensus 324 NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v 401 (580)
||++...+.+... . ++... ..+.++|+|+||+.+.||++.+++++.++.+ +++
T Consensus 163 ~~~~~~~~~~~~~---------------------~--~~~~~--~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~ 217 (366)
T cd03822 163 HGVPDPPAEPPES---------------------L--KALGG--LDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDV 217 (366)
T ss_pred CCCcCcccCCchh---------------------h--HhhcC--CCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCe
Confidence 9999766644311 0 12222 2456899999999999999999999999876 689
Q ss_pred EEEEEecCChhhHHH-------HHHHHHHCCCCeeEecc-CChHHHHHHHhcCCEEEecCCCC--CccHHHHHHHHcCCc
Q 008028 402 QIVVLGTGKKPMEQQ-------IEQLEIICPEKARGITK-FSTPLAHKIIAGADFMLVPSRFE--PCGLIQLHAMRYGTV 471 (580)
Q Consensus 402 ~lii~G~g~~~~~~~-------i~~l~~~~~~~v~~~~~-~~~~~~~~~~~~aDi~l~ps~~E--~~g~~~lEAma~G~P 471 (580)
+|+|+|.+....... ++++ ....++.+.+. .+.+....+++.||++++||.+| ++|++++|||++|+|
T Consensus 218 ~l~i~G~~~~~~~~~~~~~~~~i~~~--~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~P 295 (366)
T cd03822 218 RLLVAGETHPDLERYRGEAYALAERL--GLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKP 295 (366)
T ss_pred EEEEeccCccchhhhhhhhHhHHHhc--CCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCC
Confidence 999999986433222 2332 23457888877 56677788999999999999999 999999999999999
Q ss_pred eEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHH
Q 008028 472 PIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWE 549 (580)
Q Consensus 472 vI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~ 549 (580)
+|+++.|+ .+.+.++.+|+++ ++.|+++++++|.+++++ ++.+.+|++++ ..+.|||+.++++|.
T Consensus 296 vI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 362 (366)
T cd03822 296 VISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRLLAD--PELAQALRARAREYARAMSWERVAERYL 362 (366)
T ss_pred EEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 99999999 7788888899998 899999999999999997 66777777766 334599999999999
Q ss_pred HHHH
Q 008028 550 KMLL 553 (580)
Q Consensus 550 ~~~~ 553 (580)
++|+
T Consensus 363 ~~~~ 366 (366)
T cd03822 363 RLLA 366 (366)
T ss_pred HHhC
Confidence 9873
No 40
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.97 E-value=1e-29 Score=264.02 Aligned_cols=356 Identities=19% Similarity=0.225 Sum_probs=240.0
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..++|.. .||.+.++..++++|+++||+|+++++............. ....... . .
T Consensus 1 kIl~i~~~~~~~~-~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~------------~~~~~~~--~---~ 62 (359)
T cd03823 1 RILVVNHLYPPRS-VGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIG------------VVVYGRP--I---D 62 (359)
T ss_pred CeeEEcccCCccc-ccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCccccccc------------ceeeccc--c---c
Confidence 6999999988865 7999999999999999999999999986432222100000 0000000 0 0
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
......... ..+ .........+.....+.++.. +|| ++|+|.+........
T Consensus 63 ~~~~~~~~~--------~~~--------~~~~~~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 113 (359)
T cd03823 63 EVLRSALPR--------DLF--------HLSDYDNPAVVAEFARLLEDF------------RPD-VVHFHHLQGLGVSIL 113 (359)
T ss_pred cccCCCchh--------hhh--------HHHhccCHHHHHHHHHHHHHc------------CCC-EEEECCccchHHHHH
Confidence 000000000 000 000000011222223333332 589 788886533222221
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecC
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVN 324 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~N 324 (580)
... ...+ .++ +++|+...... .........|.++++|+...+.+.+ .+... .++.+|+|
T Consensus 114 -~~~-~~~~----~~~i~~~hd~~~~~~-----~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~------~~~~vi~n 173 (359)
T cd03823 114 -RAA-RDRG----IPIVLTLHDYWLICP-----RQGLFKKGGDAVIAPSRFLLDRYVA---NGLFA------EKISVIRN 173 (359)
T ss_pred -HHH-HhcC----CCEEEEEeeeeeecc-----hhhhhccCCCEEEEeCHHHHHHHHH---cCCCc------cceEEecC
Confidence 111 1111 334 55554322111 1111223449999999999999886 33322 28999999
Q ss_pred CCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCCCeEEE
Q 008028 325 GMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIV 404 (580)
Q Consensus 325 Gvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~li 404 (580)
|+|...+.+... +. ..+.++|+|+||+.+.||++.+++++.++.+++++|+
T Consensus 174 ~~~~~~~~~~~~---------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~ 224 (359)
T cd03823 174 GIDLDRAKRPRR---------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELV 224 (359)
T ss_pred CcChhhcccccc---------------------------CC--CCCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEE
Confidence 999887755421 11 2355789999999999999999999999876789999
Q ss_pred EEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCC-CCCccHHHHHHHHcCCceEEcCCCCccee
Q 008028 405 VLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSR-FEPCGLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 405 i~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~-~E~~g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
++|.+.......... ....++.+.+..+.+.+..+++.||++++||. .|++|++++|||+||+|+|+|+.++..+.
T Consensus 225 i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~ 301 (359)
T cd03823 225 IVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAEL 301 (359)
T ss_pred EEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHH
Confidence 999987433222221 33456888888888888899999999999998 69999999999999999999999999999
Q ss_pred EecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 008028 484 VKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 484 i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 553 (580)
+.++.+|+++ ++.|+++++++|.+++++ ++.+.++++++.. .++.+.++++|+++|+
T Consensus 302 i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 302 VRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRAGIEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred hcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHhHHH-hhhHHHHHHHHHHHhh
Confidence 9999999998 999999999999999996 7777777777643 3444899999999886
No 41
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.97 E-value=4.5e-30 Score=268.52 Aligned_cols=340 Identities=14% Similarity=0.126 Sum_probs=228.8
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..+ + .||...++.+++++|++.||+|+++++..... .... .....++.++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~--~~~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG--DYDD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc--chHH------------------HHHHcCCeEE
Confidence 689999875 2 69999999999999999999999999864210 0000 0001123332
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.+.... .+... +.....+.++.. +|| |+|+|......++..
T Consensus 57 ~~~~~~-----------------------~~~~~---~~~~~~~~~~~~------------~~D-vv~~~~~~~~~~~~~ 97 (358)
T cd03812 57 YIPARK-----------------------KNPLK---YFKKLYKLIKKN------------KYD-IVHVHGSSASGFILL 97 (358)
T ss_pred EecCCC-----------------------ccHHH---HHHHHHHHHhcC------------CCC-EEEEeCcchhHHHHH
Confidence 211100 00111 111222222222 599 899987765555554
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCC--CCccc---hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCe
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPV--KGRKI---NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGI 319 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~--~~~~~---~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i 319 (580)
+...... ... +..|...... ..... .+.+...+.+|.++++|+..++.+... .. ..++
T Consensus 98 ~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~----~~------~~~~ 161 (358)
T cd03812 98 AAKKAGV------KVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK----VK------NKKF 161 (358)
T ss_pred HHhhCCC------CeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----CC------cccE
Confidence 4433221 122 3333221111 11111 224556778999999999999998752 22 2389
Q ss_pred eEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC-
Q 008028 320 SGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG- 398 (580)
Q Consensus 320 ~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~- 398 (580)
.+|+||+|...+.+.... ++. ++..+.+ .+.++|+|+||+.++||++.+++++..+.+
T Consensus 162 ~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~--~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~ 220 (358)
T cd03812 162 KVIPNGIDLEKFIFNEEI------------------RKK-RRELGIL--EDKFVIGHVGRFSEQKNHEFLIEIFAELLKK 220 (358)
T ss_pred EEEeccCcHHHcCCCchh------------------hhH-HHHcCCC--CCCEEEEEEeccccccChHHHHHHHHHHHHh
Confidence 999999998877654321 111 4444443 466899999999999999999999999965
Q ss_pred -CCeEEEEEecCChhhHHHHHHHHHHC--CCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEc
Q 008028 399 -GNVQIVVLGTGKKPMEQQIEQLEIIC--PEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVA 475 (580)
Q Consensus 399 -~~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s 475 (580)
++++++|+|+|+ ..+.+++...++ .+++.+.+. .+.+..+++.||++++||++|++|++++|||++|+|||+|
T Consensus 221 ~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s 296 (358)
T cd03812 221 NPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILS 296 (358)
T ss_pred CCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEE
Confidence 689999999987 344455554443 346777665 3445679999999999999999999999999999999999
Q ss_pred CCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCch
Q 008028 476 STGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWK 542 (580)
Q Consensus 476 ~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~ 542 (580)
+.||..+.+.+ ..|++. .+.++++++++|.+++++ ++....+..++..+..++.
T Consensus 297 ~~~~~~~~i~~-~~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~~~~~~~~~~~~~~~ 350 (358)
T cd03812 297 DTITKEVDLTD-LVKFLS----------LDESPEIWAEEILKLKSE--DRRERSSESIKKKGLDADD 350 (358)
T ss_pred cCCchhhhhcc-CccEEe----------CCCCHHHHHHHHHHHHhC--cchhhhhhhhhhccchhhh
Confidence 99999999988 456654 677789999999999998 6666666666655444443
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.97 E-value=1e-29 Score=264.89 Aligned_cols=226 Identities=25% Similarity=0.351 Sum_probs=185.7
Q ss_pred hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHH
Q 008028 277 NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVK 356 (580)
Q Consensus 277 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 356 (580)
...+..++.+|.++++|+...+.+.+ .+.+ ++.+++||+|...+.+... +
T Consensus 136 ~~~~~~~~~~d~i~~~s~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~ 185 (364)
T cd03814 136 AYLRWFHNRADRVLVPSPSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------D 185 (364)
T ss_pred HHHHHHHHhCCEEEeCCHHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------c
Confidence 34466778999999999999886654 2222 7899999999988876543 1
Q ss_pred HHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC-CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCC
Q 008028 357 EALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG-GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFS 435 (580)
Q Consensus 357 ~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~-~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~ 435 (580)
...+++++ ..+.++|+|+||+.+.||++.+++++.++.+ ++++|+|+|.+.. ...++ ....++.+.+..+
T Consensus 186 ~~~~~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~ 256 (364)
T cd03814 186 EALRARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLD 256 (364)
T ss_pred HHHHHHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccC
Confidence 22233444 2345789999999999999999999999966 5899999999873 22333 3345688888777
Q ss_pred hHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHH
Q 008028 436 TPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 436 ~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
...+..+++.||++++||..|++|++++|||+||+|+|+++.++..+++.++.+|+++ ++.|.++++++|
T Consensus 257 ~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i 326 (364)
T cd03814 257 GEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAAL 326 (364)
T ss_pred HHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHH
Confidence 7888889999999999999999999999999999999999999999999999999997 999999999999
Q ss_pred HHHHHhcChhHHHHHHHHHHH--hcCCchHHHHHHHHHHH
Q 008028 516 NRAVATYGTPALKEMIQNCMA--LDLSWKEPARLWEKMLL 553 (580)
Q Consensus 516 ~~ll~~~~~~~~~~~~~~~~~--~~fs~~~~a~~~~~~~~ 553 (580)
.+++++ ++.+.+|.+++.. ++|+|+.+++++.++|+
T Consensus 327 ~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 327 AALLAD--PELRRRMAARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHcC--HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhhC
Confidence 999997 6777777777633 58999999999999873
No 43
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.97 E-value=2.3e-29 Score=262.74 Aligned_cols=345 Identities=18% Similarity=0.217 Sum_probs=237.1
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++|+..|+|. .||.+.++.+++++|.++||+|++++.......... ...+++.+
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----------------------~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDE----------------------ERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhh----------------------hccCceEE
Confidence 799999998886 799999999999999999999999998632111100 00111222
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.+..... ++. .. +........+ +.. .+|| ++|+|..........
T Consensus 57 ~~~~~~~-----------~~~------~~--------~~~~~~~~~~-~~~---------~~~D-ii~~~~~~~~~~~~~ 100 (357)
T cd03795 57 RAPSLLN-----------VAS------TP--------FSPSFFKQLK-KLA---------KKAD-VIHLHFPNPLADLAL 100 (357)
T ss_pred Eeecccc-----------ccc------cc--------ccHHHHHHHH-hcC---------CCCC-EEEEecCcchHHHHH
Confidence 1111000 000 00 0000111111 111 1589 788875433222111
Q ss_pred HHHhhhccCccccceE-EEcCCCCCC---CCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeE
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKP---VKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISG 321 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~---~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~ 321 (580)
. ... ...+. +++|+.... .......+++..++.+|.++++|+.+.+.+.... ..+ .++.+
T Consensus 101 ~--~~~-----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~--~~~-------~~~~~ 164 (357)
T cd03795 101 L--LLP-----RKKPVVVHWHSDIVKQKLLLKLYRPLQRRFLRRADAIVATSPNYAETSPVLR--RFR-------DKVRV 164 (357)
T ss_pred H--Hhc-----cCceEEEEEcChhhccchhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhc--CCc-------cceEE
Confidence 1 111 12233 455532111 1111223557788999999999999998876521 111 28899
Q ss_pred ecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCCCe
Q 008028 322 IVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNV 401 (580)
Q Consensus 322 I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v 401 (580)
|+||+|...+.+.... +. ..... ..+.++|+|+||+.+.||++.++++++++. ++
T Consensus 165 i~~gi~~~~~~~~~~~------------------~~---~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~--~~ 219 (357)
T cd03795 165 IPLGLDPARYPRPDAL------------------EE---AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP--DA 219 (357)
T ss_pred ecCCCChhhcCCcchh------------------hh---HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc--Cc
Confidence 9999998887654321 00 11122 235579999999999999999999999986 89
Q ss_pred EEEEEecCChhhHHHHHHHHHHC--CCCeeEeccCChHHHHHHHhcCCEEEecCC--CCCccHHHHHHHHcCCceEEcCC
Q 008028 402 QIVVLGTGKKPMEQQIEQLEIIC--PEKARGITKFSTPLAHKIIAGADFMLVPSR--FEPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 402 ~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~--~E~~g~~~lEAma~G~PvI~s~~ 477 (580)
+++|+|+|. ....++++..+. ..++.+.+..+.+....+++.||++++||. .|++|++++|||++|+|+|+++.
T Consensus 220 ~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~ 297 (357)
T cd03795 220 PLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEI 297 (357)
T ss_pred EEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCC
Confidence 999999987 455566665433 357888888888888889999999999996 59999999999999999999999
Q ss_pred CCcceeEec-CceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHH
Q 008028 478 GGLFDTVKE-GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPA 545 (580)
Q Consensus 478 gg~~e~i~~-~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a 545 (580)
++..+.+.+ +.+|+++ ++.|+++++++|.+++++ ++.+.+|++++ +.+.|||+.++
T Consensus 298 ~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 298 GTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred CCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHhcchHhhC
Confidence 999998886 8999998 999999999999999997 66666776665 56799998764
No 44
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.97 E-value=1.7e-29 Score=262.99 Aligned_cols=225 Identities=21% Similarity=0.283 Sum_probs=180.5
Q ss_pred HHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHH
Q 008028 280 KAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEAL 359 (580)
Q Consensus 280 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 359 (580)
+..+..++.++++|+.....+... .. ..++.+|+||+|.+.+.+... ...
T Consensus 144 ~~~~~~~~~i~~~s~~~~~~~~~~----~~------~~~~~vi~~~~~~~~~~~~~~-------------------~~~- 193 (375)
T cd03821 144 RRLLQAAAAVHATSEQEAAEIRRL----GL------KAPIAVIPNGVDIPPFAALPS-------------------RGR- 193 (375)
T ss_pred HHHHhcCCEEEECCHHHHHHHHhh----CC------cccEEEcCCCcChhccCcchh-------------------hhh-
Confidence 456678999999998777776641 11 228999999999988866432 111
Q ss_pred HHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHC--CCCeeEeccCC
Q 008028 360 QSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIIC--PEKARGITKFS 435 (580)
Q Consensus 360 ~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~~~~~ 435 (580)
++.++.+ .+.++|+|+||+.+.||++.+++++.++.+ ++++|+|+|.+.......++.+..++ ..++.+.+..+
T Consensus 194 ~~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 271 (375)
T cd03821 194 RRKFPIL--PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLY 271 (375)
T ss_pred hhhccCC--CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCC
Confidence 4444443 466899999999999999999999999976 69999999998765666666653433 35688888777
Q ss_pred hHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHH
Q 008028 436 TPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 436 ~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
.+....+++.||++++||..|++|++++|||+||+|+|+++.+|+.+++.+ ..|++. +.++++++++|
T Consensus 272 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i 339 (375)
T cd03821 272 GEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAAL 339 (375)
T ss_pred hHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHH
Confidence 777888999999999999999999999999999999999999999999988 788874 45669999999
Q ss_pred HHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHH
Q 008028 516 NRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEK 550 (580)
Q Consensus 516 ~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~ 550 (580)
.+++++ ++.+.++.+++ +.++|||+.++++|++
T Consensus 340 ~~l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 340 RRALEL--PQRLKAMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHhC--HHHHHHHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 999997 55666666655 5689999999998863
No 45
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.97 E-value=2.7e-29 Score=261.99 Aligned_cols=262 Identities=20% Similarity=0.222 Sum_probs=202.2
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHcccc
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEE 305 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~ 305 (580)
++| ++|+|.+........+..... ..+. +++|+........ ..+++..++.+|.++++|+..++.+.+.
T Consensus 79 ~~D-ii~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vi~~s~~~~~~l~~~-- 148 (355)
T cd03799 79 GID-HIHAHFGTTPATVAMLASRLG------GIPYSFTAHGKDIFRSPD-AIDLDEKLARADFVVAISEYNRQQLIRL-- 148 (355)
T ss_pred CCC-EEEECCCCchHHHHHHHHHhc------CCCEEEEEecccccccCc-hHHHHHHHhhCCEEEECCHHHHHHHHHh--
Confidence 589 899987654444433332211 2233 5555432221111 1467888899999999999999999873
Q ss_pred CCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccC
Q 008028 306 KGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKG 385 (580)
Q Consensus 306 ~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg 385 (580)
.|.+.. ++.+|+||+|.+.+.+.... ...+.+.|+|+||+.+.||
T Consensus 149 ~~~~~~------~~~vi~~~~d~~~~~~~~~~-----------------------------~~~~~~~i~~~g~~~~~k~ 193 (355)
T cd03799 149 LGCDPD------KIHVVHCGVDLERFPPRPPP-----------------------------PPGEPLRILSVGRLVEKKG 193 (355)
T ss_pred cCCCcc------cEEEEeCCcCHHHcCCcccc-----------------------------ccCCCeEEEEEeeeccccC
Confidence 244433 89999999998877654200 0134578999999999999
Q ss_pred HHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHC--CCCeeEeccCChHHHHHHHhcCCEEEecCCC------
Q 008028 386 SDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIIC--PEKARGITKFSTPLAHKIIAGADFMLVPSRF------ 455 (580)
Q Consensus 386 ~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~------ 455 (580)
++.+++++.++.+ ++++|+|+|.+.. ...++++..++ +.++.+.+..+.+.+..+++.||++++||..
T Consensus 194 ~~~l~~~~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~ 271 (355)
T cd03799 194 LDYLLEALALLKDRGIDFRLDIVGDGPL--RDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDR 271 (355)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEECCcc--HHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCc
Confidence 9999999999876 5899999999872 34455554443 3568888877778888999999999999998
Q ss_pred CCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH-
Q 008028 456 EPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC- 534 (580)
Q Consensus 456 E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~- 534 (580)
|++|++++|||++|+|+|+++.++..+++.++.+|+++ ++.|+++++++|.+++++ ++.+.++++++
T Consensus 272 e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~~~~~a~ 339 (355)
T cd03799 272 EGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD--PELRREMGEAGR 339 (355)
T ss_pred cCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 99999999999999999999999999999999899998 889999999999999997 66677777766
Q ss_pred --HHhcCCchHHHHH
Q 008028 535 --MALDLSWKEPARL 547 (580)
Q Consensus 535 --~~~~fs~~~~a~~ 547 (580)
+.+.|||+.++++
T Consensus 340 ~~~~~~~s~~~~~~~ 354 (355)
T cd03799 340 ARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHhcCHHHHhhc
Confidence 4578999998865
No 46
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.97 E-value=5e-29 Score=260.69 Aligned_cols=368 Identities=18% Similarity=0.180 Sum_probs=248.5
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++|+..++|. .||.+..+..++++|+++||+|+++++............ .......+++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 699999998886 499999999999999999999999998642211110000 011123455555
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecC-CccchHH-
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGND-WHTALLP- 243 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~-~~~~~l~- 243 (580)
.+........ . +..+...+..+.......+.. ... +|| ++|+|. +....++
T Consensus 64 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~-~~~---------~~D-~v~~~~~~~~~~~~~ 116 (394)
T cd03794 64 RVPLPPYKKN-------G---------LLKRLLNYLSFALSALLALLK-RRR---------RPD-VIIATSPPLLIALAA 116 (394)
T ss_pred EEecCCCCcc-------c---------hHHHHHhhhHHHHHHHHHHHh-ccc---------CCC-EEEEcCChHHHHHHH
Confidence 4432211110 0 111222222233333333221 111 599 677764 2222222
Q ss_pred HHHHHhhhccCccccceE-EEcCCCCCCC-------C------CccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcc
Q 008028 244 CYLKFMYQSKGIHKNAKR-LCRPRYDKPV-------K------GRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVE 309 (580)
Q Consensus 244 ~~l~~~~~~~gi~~~~~~-~~l~~~~~~~-------~------~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~ 309 (580)
..++... ..++ +.+|+..... . .....+++..++.+|.++++|+...+.+.. .+.+
T Consensus 117 ~~~~~~~-------~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---~~~~ 186 (394)
T cd03794 117 LLLARLK-------GAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYLVR---RGVP 186 (394)
T ss_pred HHHHHhc-------CCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHh---cCCC
Confidence 2233221 2233 5554321110 0 111123466778999999999999999873 3433
Q ss_pred hhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHH
Q 008028 310 LDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDIL 389 (580)
Q Consensus 310 ~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~l 389 (580)
.. ++.+|+||++...+.+.... .. +..... ..+.++|+|+|++.++||++.+
T Consensus 187 ~~------~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~--~~~~~~i~~~G~~~~~k~~~~l 238 (394)
T cd03794 187 PE------KISVIPNGVDLELFKPPPAD-------------------ES-LRKELG--LDDKFVVLYAGNIGRAQGLDTL 238 (394)
T ss_pred cC------ceEEcCCCCCHHHcCCccch-------------------hh-hhhccC--CCCcEEEEEecCcccccCHHHH
Confidence 33 89999999998877655321 11 222222 2456799999999999999999
Q ss_pred HHHHhhhcCC-CeEEEEEecCChhhHHHHHHHHHH-CCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCc-----cHHH
Q 008028 390 AQAIPKFMGG-NVQIVVLGTGKKPMEQQIEQLEII-CPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPC-----GLIQ 462 (580)
Q Consensus 390 l~a~~~l~~~-~v~lii~G~g~~~~~~~i~~l~~~-~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~-----g~~~ 462 (580)
++++.++.+. +++|+|+|+|.. ...+.++... ...++.+.+..+.+.+..+++.||++++|+..|++ |+++
T Consensus 239 ~~~~~~l~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~ 316 (394)
T cd03794 239 LEAAALLKDRPDIRFLIVGDGPE--KEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKL 316 (394)
T ss_pred HHHHHHHhhcCCeEEEEeCCccc--HHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHH
Confidence 9999998764 899999999872 3444443332 23468888877778888899999999999998865 7889
Q ss_pred HHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcC
Q 008028 463 LHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDL 539 (580)
Q Consensus 463 lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~f 539 (580)
+|||++|+|+|+++.++..+.+.++.+|+++ ++.|+++++++|.+++.+ ++.+.++.+++ +.++|
T Consensus 317 ~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~ 384 (394)
T cd03794 317 FEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--PEERAEMGENGRRYVEEKF 384 (394)
T ss_pred HHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998999998 889999999999999976 66777777665 45689
Q ss_pred CchHHHHHHH
Q 008028 540 SWKEPARLWE 549 (580)
Q Consensus 540 s~~~~a~~~~ 549 (580)
||+.++++|+
T Consensus 385 s~~~~~~~~~ 394 (394)
T cd03794 385 SREKLAERLL 394 (394)
T ss_pred cHHHHHHhcC
Confidence 9999998873
No 47
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.97 E-value=2.1e-29 Score=268.56 Aligned_cols=278 Identities=14% Similarity=0.114 Sum_probs=199.7
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceEEEcCCCCCCCCCccchHHHHHHhcCce------eEeeCHHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCRPRYDKPVKGRKINWMKAGILESDR------VLTVSPHYAKEL 300 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ad~------vi~vS~~~~~~l 300 (580)
+|| |+|+|...+.+.+.....+.+.+-+. .+.|++......+...+....+..++. ++++|..+++.+
T Consensus 280 rpD-IVHt~~~~a~l~g~laA~lagvpviv-----~~~h~~~~~~~~r~~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~l 353 (578)
T PRK15490 280 KLD-YLSVWQDGACLMIALAALIAGVPRIQ-----LGLRGLPPVVRKRLFKPEYEPLYQALAVVPGVDFMSNNHCVTRHY 353 (578)
T ss_pred CCC-EEEEcCcccHHHHHHHHHhcCCCEEE-----EeecccCCcchhhHHHHHHHHhhhhceeEecchhhhccHHHHHHH
Confidence 699 99999877767766666554322111 223332222222222232222333333 667888888888
Q ss_pred HccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHH--cCCCCCCCCcEEEEEc
Q 008028 301 ISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQ--LGLPVDRNIPLIGFIG 378 (580)
Q Consensus 301 ~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~glp~~~~~~~i~f~G 378 (580)
.+ +.+++.+ ++.+|+||+|...|.|.... ....++. .+++ ++.++|+++|
T Consensus 354 ~~--~lgip~~------KI~VIyNGVD~~rf~p~~~~------------------~~~~r~~~~~~l~--~~~~vIg~Vg 405 (578)
T PRK15490 354 AD--WLKLEAK------HFQVVYNGVLPPSTEPSSEV------------------PHKIWQQFTQKTQ--DADTTIGGVF 405 (578)
T ss_pred HH--HhCCCHH------HEEEEeCCcchhhcCccchh------------------hHHHHHHhhhccC--CCCcEEEEEE
Confidence 76 3466666 89999999999888775321 1112222 2343 3447999999
Q ss_pred cCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCC
Q 008028 379 RLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSR 454 (580)
Q Consensus 379 rl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~ 454 (580)
|+.+.||.+.+++++.++.+ ++++|+|+|+|+ .++.++++..+++ +++.+.+. .+....+|+.+|++++||+
T Consensus 406 Rl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~elgL~d~V~FlG~--~~Dv~~~LaaADVfVlPS~ 481 (578)
T PRK15490 406 RFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQLGILERILFVGA--SRDVGYWLQKMNVFILFSR 481 (578)
T ss_pred EEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHHcCCCCcEEECCC--hhhHHHHHHhCCEEEEccc
Confidence 99999999999999987754 689999999987 4566776666554 56777765 2345679999999999999
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHH---HHHhcChhHHHHH-
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNR---AVATYGTPALKEM- 530 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~---ll~~~~~~~~~~~- 530 (580)
+|+||++++|||+||+|||+|+.||..|++.++.+|+++ ++.|++++++++.. +.+. ......|
T Consensus 482 ~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV----------p~~D~~aLa~ai~lA~aL~~l--l~~~~~mg 549 (578)
T PRK15490 482 YEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL----------DDAQTVNLDQACRYAEKLVNL--WRSRTGIC 549 (578)
T ss_pred ccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE----------CCCChhhHHHHHHHHHHHHHH--HHHHHHHH
Confidence 999999999999999999999999999999999999998 89998888877633 3332 2222233
Q ss_pred --HHHHHHhcCCchHHHHHHHHHHHH
Q 008028 531 --IQNCMALDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 531 --~~~~~~~~fs~~~~a~~~~~~~~~ 554 (580)
+++.+.++|||+.|+++|.++|.+
T Consensus 550 ~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 550 QQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 344466899999999999999975
No 48
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.97 E-value=1.1e-28 Score=255.22 Aligned_cols=358 Identities=25% Similarity=0.352 Sum_probs=252.8
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..++|. .||...++..++++|.+.||+|.++++.......... .. .....
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~----------------~~------~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEE----------------VG------GIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceee----------------ec------Cccee
Confidence 699999997775 6999999999999999999999999987532221100 00 00000
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.. ... . ..+ ...............++.. +|| ++|+|.+........
T Consensus 57 ~~--~~~-~--------~~~----------~~~~~~~~~~~~~~~~~~~------------~~D-ii~~~~~~~~~~~~~ 102 (374)
T cd03801 57 RP--PPL-L--------RVR----------RLLLLLLLALRLRRLLRRE------------RFD-VVHAHDWLALLAAAL 102 (374)
T ss_pred cC--Ccc-c--------ccc----------hhHHHHHHHHHHHHHhhhc------------CCc-EEEEechhHHHHHHH
Confidence 00 000 0 000 0011111222222222222 589 888887776655542
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCCC--------CccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhc
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPVK--------GRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRK 316 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~~--------~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~ 316 (580)
.... ...++ +.+|+...... .....+.+..++.+|.++++|+...+.+.+. .+.+.+
T Consensus 103 ~~~~-------~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~--~~~~~~----- 168 (374)
T cd03801 103 AARL-------LGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL--GGVPPE----- 168 (374)
T ss_pred HHHh-------cCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc--CCCCCC-----
Confidence 2222 23344 55554433221 1122445677889999999999999999872 222212
Q ss_pred CCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhh
Q 008028 317 TGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKF 396 (580)
Q Consensus 317 ~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l 396 (580)
++.+++||+|...+.+.. ...+..... ..+.++|+|+|++.+.||++.+++++..+
T Consensus 169 -~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~ 224 (374)
T cd03801 169 -KITVIPNGVDTERFRPAP---------------------RAARRRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKL 224 (374)
T ss_pred -cEEEecCcccccccCccc---------------------hHHHhhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHH
Confidence 899999999988775531 111122222 24557999999999999999999999998
Q ss_pred cC--CCeEEEEEecCChhhHHHHHHHHHH--CCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCce
Q 008028 397 MG--GNVQIVVLGTGKKPMEQQIEQLEII--CPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVP 472 (580)
Q Consensus 397 ~~--~~v~lii~G~g~~~~~~~i~~l~~~--~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~Pv 472 (580)
.+ ++++|+|+|.+. ....++++..+ ...++.+.+..+.+....+++.||++++|+..|++|++++|||++|+|+
T Consensus 225 ~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pv 302 (374)
T cd03801 225 RKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPV 302 (374)
T ss_pred hhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcE
Confidence 66 589999999765 34455554432 3456888887777888889999999999999999999999999999999
Q ss_pred EEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHH
Q 008028 473 IVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWE 549 (580)
Q Consensus 473 I~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~ 549 (580)
|+++.++..+.+.++.+|+++ ++.|+++++++|.+++++ ++.+.++.+++ ..+.|+|+.+++++.
T Consensus 303 I~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (374)
T cd03801 303 VASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRRLGEAARERVAERFSWDRVAARTE 370 (374)
T ss_pred EEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999999989999998 899999999999999987 66677777765 468999999999999
Q ss_pred HHHH
Q 008028 550 KMLL 553 (580)
Q Consensus 550 ~~~~ 553 (580)
++|+
T Consensus 371 ~~~~ 374 (374)
T cd03801 371 EVYY 374 (374)
T ss_pred HhhC
Confidence 8873
No 49
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.97 E-value=3.2e-29 Score=261.50 Aligned_cols=350 Identities=19% Similarity=0.146 Sum_probs=242.3
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..+.|. ..||.++++.+|+++|+++||+|++++.............. .. ..
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~--------------~~-------~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRA--------------AL-------RL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchh--------------cc-------cc-
Confidence 689999987772 27999999999999999999999999987532222110000 00 00
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.... . .......+...........+.. ++| |+|+|.+.....
T Consensus 58 -~~~~-------------~--------~~~~~~~~~~~~~~~~~~~~~~------------~~D-ii~~~~~~~~~~--- 99 (365)
T cd03809 58 -LLRL-------------P--------RRLLWGLLFLLRAGDRLLLLLL------------GLD-LLHSPHNTAPLL--- 99 (365)
T ss_pred -cccc-------------c--------cccccchhhHHHHHHHHHhhhc------------CCC-eeeecccccCcc---
Confidence 0000 0 0000111111111112222221 589 888887665444
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCCC---------CccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhh
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPVK---------GRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIR 315 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~~---------~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~ 315 (580)
. ....++ +++|+...... .....+++..++.+|.++++|+..++.+.+. .+.+.+
T Consensus 100 --~-------~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~--~~~~~~---- 164 (365)
T cd03809 100 --R-------LRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRY--LGVPPD---- 164 (365)
T ss_pred --c-------CCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHH--hCcCHH----
Confidence 1 122334 55553321111 1122345677889999999999999999862 333333
Q ss_pred cCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhh
Q 008028 316 KTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPK 395 (580)
Q Consensus 316 ~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~ 395 (580)
++.+++||+|...+.+... +. +..... ..+.++|+|+||+.+.||++.+++++..
T Consensus 165 --~~~vi~~~~~~~~~~~~~~-------------------~~--~~~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~ 219 (365)
T cd03809 165 --KIVVIPLGVDPRFRPPPAE-------------------AE--VLRALY--LLPRPYFLYVGTIEPRKNLERLLEAFAR 219 (365)
T ss_pred --HEEeeccccCccccCCCch-------------------HH--HHHHhc--CCCCCeEEEeCCCccccCHHHHHHHHHH
Confidence 8899999999887765432 11 222222 2456799999999999999999999999
Q ss_pred hcCC--CeEEEEEecCChhhHHHHHHHHH-HCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCce
Q 008028 396 FMGG--NVQIVVLGTGKKPMEQQIEQLEI-ICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVP 472 (580)
Q Consensus 396 l~~~--~v~lii~G~g~~~~~~~i~~l~~-~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~Pv 472 (580)
+.+. +++|+|+|.+..........+.. ....++.+.+..+...+..+++.||++++||.+|++|++++|||++|+||
T Consensus 220 ~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pv 299 (365)
T cd03809 220 LPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPV 299 (365)
T ss_pred HHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcE
Confidence 9764 69999999876444433333221 23456888888888888899999999999999999999999999999999
Q ss_pred EEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHH
Q 008028 473 IVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEK 550 (580)
Q Consensus 473 I~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~ 550 (580)
|+++.|+..|++.+ +|+++ ++.|+++++++|.+++.+ ++.+.++++++ ..+.|||+.++++|.+
T Consensus 300 I~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 300 IASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREELRERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred EecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCCHHHHHHHHhC
Confidence 99999999998854 57776 889999999999999886 67777777766 4578999999998863
No 50
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.97 E-value=3.1e-30 Score=253.74 Aligned_cols=363 Identities=18% Similarity=0.247 Sum_probs=253.8
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeE
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDR 164 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (580)
++|+.|+..|+|. .||++.++..|++.|.++||.|.+++-.|.. + ..+| ..-+|+++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~-----------------r-~gir---ylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGN-----------------R-VGIR---YLTNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccC-----------------c-ccee---eecCCceE
Confidence 4799999999997 7999999999999999999999999998732 1 1122 12356888
Q ss_pred EEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHH
Q 008028 165 VFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPC 244 (580)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~ 244 (580)
|+++....++. -|-..+|+. ..+.+.. .+|+ + .. |+|-|...+.+. .
T Consensus 58 yylp~~v~~n~---tT~ptv~~~-------~Pllr~i--------~lrE-~------------I~-ivhghs~fS~la-h 104 (426)
T KOG1111|consen 58 YYLPAVVGYNQ---TTFPTVFSD-------FPLLRPI--------LLRE-R------------IE-IVHGHSPFSYLA-H 104 (426)
T ss_pred EEEeeeeeecc---cchhhhhcc-------Ccccchh--------hhhh-c------------eE-EEecCChHHHHH-H
Confidence 88876555442 122233331 0111111 1111 1 34 777775444332 1
Q ss_pred HHHHhhhccCccccceE-EEcCCCCC--CCCCccch-HHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCee
Q 008028 245 YLKFMYQSKGIHKNAKR-LCRPRYDK--PVKGRKIN-WMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGIS 320 (580)
Q Consensus 245 ~l~~~~~~~gi~~~~~~-~~l~~~~~--~~~~~~~~-~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~ 320 (580)
..-...+..| .++ ||-|.... .......| .+...+...|+++|||..-++...- .-..+++ ++.
T Consensus 105 e~l~hartMG----lktVfTdHSlfGfad~~si~~n~ll~~sL~~id~~IcVshtskentvl--r~~L~p~------kvs 172 (426)
T KOG1111|consen 105 EALMHARTMG----LKTVFTDHSLFGFADIGSILTNKLLPLSLANIDRIICVSHTSKENTVL--RGALAPA------KVS 172 (426)
T ss_pred HHHHHHHhcC----ceEEEeccccccccchhhhhhcceeeeeecCCCcEEEEeecCCCceEE--EeccCHh------Hee
Confidence 1111112222 233 55442211 11111222 2344567899999999977666442 1233333 999
Q ss_pred EecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--
Q 008028 321 GIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG-- 398 (580)
Q Consensus 321 ~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~-- 398 (580)
+|||.++...|.|...+ -| +.+..+|+.++|+-.+||+|+|+++++++-+
T Consensus 173 vIPnAv~~~~f~P~~~~---------------------------~~-S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~ 224 (426)
T KOG1111|consen 173 VIPNAVVTHTFTPDAAD---------------------------KP-SADIITIVVASRLVYRKGIDLLLEIIPSVCDKH 224 (426)
T ss_pred eccceeeccccccCccc---------------------------cC-CCCeeEEEEEeeeeeccchHHHHHHHHHHHhcC
Confidence 99999999999985321 01 1344789999999999999999999999965
Q ss_pred CCeEEEEEecCCh--hhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 399 GNVQIVVLGTGKK--PMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 399 ~~v~lii~G~g~~--~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
++++|+|+|+|++ .+++.++++.. .+++.+++..+.+.++..+..-|++++||..|+||++++|||.||.+||++.
T Consensus 225 p~vrfii~GDGPk~i~lee~lEk~~l--~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTr 302 (426)
T KOG1111|consen 225 PEVRFIIIGDGPKRIDLEEMLEKLFL--QDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTR 302 (426)
T ss_pred CCeeEEEecCCcccchHHHHHHHhhc--cCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEee
Confidence 8999999999995 45555555543 4669999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 008028 477 TGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 477 ~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
.||..|++-+. .-. . ...+++++++++.+++...... -...-+..++.|+|+..+++-+++|.++.
T Consensus 303 VGGIpeVLP~d-~i~-~----------~~~~~~dl~~~v~~ai~~~~~~--p~~~h~~v~~~y~w~dVa~rTekvy~r~~ 368 (426)
T KOG1111|consen 303 VGGIPEVLPED-MIT-L----------GEPGPDDLVGAVEKAITKLRTL--PLEFHDRVKKMYSWKDVAERTEKVYDRAA 368 (426)
T ss_pred cCCccccCCcc-cee-c----------cCCChHHHHHHHHHHHHHhccC--chhHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 99999998764 221 2 5667889999998888853221 12223446678999999999999999987
Q ss_pred hcC
Q 008028 557 VAG 559 (580)
Q Consensus 557 ~~~ 559 (580)
...
T Consensus 369 ~t~ 371 (426)
T KOG1111|consen 369 TTS 371 (426)
T ss_pred hcc
Confidence 654
No 51
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.97 E-value=1.2e-28 Score=257.00 Aligned_cols=353 Identities=21% Similarity=0.256 Sum_probs=241.9
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..++|. .||.+..+..++++|.++||+|+++++........... ..+...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV----------------------VVVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc----------------------cccccc
Confidence 699999998887 79999999999999999999999999875432221000 000000
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCC-ccchHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDW-HTALLPC 244 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~-~~~~l~~ 244 (580)
..... ...+ .. ....+.......++.. +|| |+|+|.. ..+.++.
T Consensus 57 ~~~~~-~~~~--------~~-------------~~~~~~~~~~~~~~~~------------~~D-iv~~~~~~~~~~~~~ 101 (374)
T cd03817 57 RVPTF-KYPD--------FR-------------LPLPIPRALIIILKEL------------GPD-IVHTHTPFSLGLLGL 101 (374)
T ss_pred ccccc-hhhh--------hh-------------ccccHHHHHHHHHhhc------------CCC-EEEECCchhhhhHHH
Confidence 00000 0000 00 0000111122222222 589 7777643 3333333
Q ss_pred HHHHhhhccCccccceE-EEcCCCCC----------CCCCcc-c-hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchh
Q 008028 245 YLKFMYQSKGIHKNAKR-LCRPRYDK----------PVKGRK-I-NWMKAGILESDRVLTVSPHYAKELISGEEKGVELD 311 (580)
Q Consensus 245 ~l~~~~~~~gi~~~~~~-~~l~~~~~----------~~~~~~-~-~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 311 (580)
.+.+.. +.++ ++.|.... ...... . .+++..+..+|.++++|+..++.+.+ .+.+
T Consensus 102 ~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~---~~~~-- 169 (374)
T cd03817 102 RVARKL-------GIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE---YGVK-- 169 (374)
T ss_pred HHHHHc-------CCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh---cCCC--
Confidence 333332 1223 34332111 000011 1 35567778999999999998888875 3332
Q ss_pred hhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHH
Q 008028 312 NIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQ 391 (580)
Q Consensus 312 ~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~ 391 (580)
.++.+++||+|...+.+... ...+++++++ .+.++|+|+|++.+.||++.+++
T Consensus 170 -----~~~~vi~~~~~~~~~~~~~~--------------------~~~~~~~~~~--~~~~~i~~~G~~~~~k~~~~l~~ 222 (374)
T cd03817 170 -----RPIEVIPTGIDLDRFEPVDG--------------------DDERRKLGIP--EDEPVLLYVGRLAKEKNIDFLIR 222 (374)
T ss_pred -----CceEEcCCccchhccCccch--------------------hHHHHhcCCC--CCCeEEEEEeeeecccCHHHHHH
Confidence 16899999999887765432 2224555553 45579999999999999999999
Q ss_pred HHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHC--CCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHH
Q 008028 392 AIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIIC--PEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMR 467 (580)
Q Consensus 392 a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma 467 (580)
+++++.+ ++++|+++|.|. ..+.++++..++ ..++.+.+..+...+..+++.||++++||..|++|++++|||+
T Consensus 223 ~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~ 300 (374)
T cd03817 223 AFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMA 300 (374)
T ss_pred HHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHH
Confidence 9999876 789999999987 345555555433 3568888887888888999999999999999999999999999
Q ss_pred cCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHH--hcCCchHHH
Q 008028 468 YGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMA--LDLSWKEPA 545 (580)
Q Consensus 468 ~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~--~~fs~~~~a 545 (580)
||+|+|+++.|+..+++.++.+|+++ ++.+. +++++|.+++++ ++.+.+|++++.. ++++ .+
T Consensus 301 ~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~---~~ 364 (374)
T cd03817 301 AGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELRRRLSKNAEESAEKFS---FA 364 (374)
T ss_pred cCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHH---HH
Confidence 99999999999999999999999998 77777 999999999997 6666777776632 3444 56
Q ss_pred HHHHHHHHH
Q 008028 546 RLWEKMLLS 554 (580)
Q Consensus 546 ~~~~~~~~~ 554 (580)
++++++|++
T Consensus 365 ~~~~~~~~~ 373 (374)
T cd03817 365 KKVEKLYEE 373 (374)
T ss_pred HHHHHHHhc
Confidence 777777664
No 52
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.97 E-value=1.5e-28 Score=253.95 Aligned_cols=345 Identities=19% Similarity=0.181 Sum_probs=236.9
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++.. .||...++..++++|.+.||+|+++++...... .....+++.+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999976 489999999999999999999999998632110 0111234444
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.+...... . +............+.++.. +|| ++|+|.....+++..
T Consensus 52 ~~~~~~~~----------~-----------~~~~~~~~~~~~~~~~~~~------------~~d-vv~~~~~~~~~~~~~ 97 (359)
T cd03808 52 PIPLDRRG----------I-----------NPFKDLKALLRLYRLLRKE------------RPD-IVHTHTPKPGILGRL 97 (359)
T ss_pred eccccccc----------c-----------ChHhHHHHHHHHHHHHHhc------------CCC-EEEEccccchhHHHH
Confidence 33211100 0 0001111112222333322 599 888887766666555
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCCCCc------cchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCC
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPVKGR------KINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTG 318 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~------~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~ 318 (580)
.+.... ...+ +..++........ .....+..++.+|.++++|+...+.+.+. +... +..+
T Consensus 98 ~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---~~~~----~~~~ 164 (359)
T cd03808 98 AARLAG------VPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL---GIIK----KKKT 164 (359)
T ss_pred HHHHcC------CCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh---cCCC----cCce
Confidence 444221 1222 3333322211111 11234667788999999999999998862 2211 0226
Q ss_pred eeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC
Q 008028 319 ISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG 398 (580)
Q Consensus 319 i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~ 398 (580)
+.+++||+|...+.+.... . ..+.++|+|+||+.+.||++.++++++.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~---------------------------~--~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 215 (359)
T cd03808 165 VLIPGSGVDLDRFSPSPEP---------------------------I--PEDDPVFLFVARLLKDKGIDELLEAARILKA 215 (359)
T ss_pred EEecCCCCChhhcCccccc---------------------------c--CCCCcEEEEEeccccccCHHHHHHHHHHHHh
Confidence 7888999998776554210 0 1355799999999999999999999999874
Q ss_pred --CCeEEEEEecCChhhHHHHHHHHH-HCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEc
Q 008028 399 --GNVQIVVLGTGKKPMEQQIEQLEI-ICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVA 475 (580)
Q Consensus 399 --~~v~lii~G~g~~~~~~~i~~l~~-~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s 475 (580)
++++|+|+|.+..........+.. ....++.+.+. ...+..+++.||++++||..|++|++++|||++|+|+|+|
T Consensus 216 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s 293 (359)
T cd03808 216 KGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIAT 293 (359)
T ss_pred cCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEe
Confidence 689999999987432222111111 22345766665 3446679999999999999999999999999999999999
Q ss_pred CCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHH
Q 008028 476 STGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWE 549 (580)
Q Consensus 476 ~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~ 549 (580)
+.++..+++.++.+|+++ ++.|+++++++|.+++++ ++.+.++.+++ +.+.|||+.++++|.
T Consensus 294 ~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 294 DVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred cCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999999999999998 899999999999999987 66666776665 467999999999886
No 53
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.97 E-value=3.3e-28 Score=250.38 Aligned_cols=337 Identities=21% Similarity=0.216 Sum_probs=227.7
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..+.| .||..+++..++++|.+.||+|++++..... .... . ...++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~------~---------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFY------E---------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCcc------c---------------cCCcccee
Confidence 68999988666 5999999999999999999999999986532 0000 0 01122222
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.+...... . ............+.++.. +|| +++.|.+. ....
T Consensus 56 ~~~~~~~~-~---------------------~~~~~~~~~~~~~~l~~~------------~~d-~i~~~~~~---~~~~ 97 (348)
T cd03820 56 DLGDKRDS-K---------------------LLARFKKLRRLRKLLKNN------------KPD-VVISFLTS---LLTF 97 (348)
T ss_pred eccccccc-c---------------------hhccccchHHHHHhhccc------------CCC-EEEEcCch---HHHH
Confidence 22111000 0 000001111222222221 599 67776655 1112
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCCCCccch--HHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEe
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKIN--WMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGI 322 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~--~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I 322 (580)
+..... + ..++ .+.|............ ..+..++.+|.++++|+..+.... ... ..++.+|
T Consensus 98 ~~~~~~--~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~-----~~~------~~~~~vi 161 (348)
T cd03820 98 LASLGL--K---IVKLIVSEHNSPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDRALYY-----KKF------NKNVVVI 161 (348)
T ss_pred HHHHhh--c---cccEEEecCCCccchhhhhHHHHHHHHHHhcCCEEEEeCHHHHHHhh-----ccC------CCCeEEe
Confidence 211110 0 1133 4444332222222122 267788999999999998872222 122 2289999
Q ss_pred cCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CC
Q 008028 323 VNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GN 400 (580)
Q Consensus 323 ~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~ 400 (580)
+||++...+.+.. ..+.+.|+|+|++.+.||++.++++++++.+ ++
T Consensus 162 ~~~~~~~~~~~~~--------------------------------~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~ 209 (348)
T cd03820 162 PNPLPFPPEEPSS--------------------------------DLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPD 209 (348)
T ss_pred cCCcChhhccccC--------------------------------CCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCC
Confidence 9999977654320 1355799999999999999999999999964 78
Q ss_pred eEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCC
Q 008028 401 VQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTG 478 (580)
Q Consensus 401 v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~g 478 (580)
++|+|+|.+.. ...+.++..+.+ .++.+.+. .+.+..+++.||++++||.+|++|++++|||++|+|+|+++.+
T Consensus 210 ~~l~i~G~~~~--~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~ 285 (348)
T cd03820 210 WKLRIVGDGPE--REALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCP 285 (348)
T ss_pred eEEEEEeCCCC--HHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCC
Confidence 99999999873 444444444443 34555544 4556679999999999999999999999999999999999965
Q ss_pred -CcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHH
Q 008028 479 -GLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWE 549 (580)
Q Consensus 479 -g~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~ 549 (580)
+..+++.++.+|+++ ++.|+++++++|.+++++ ++.+.+|.+++ +.+.|+|+.++++|.
T Consensus 286 ~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 286 TGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred CchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 556667777799998 999999999999999987 77777777776 557899999999986
No 54
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=7.4e-28 Score=249.92 Aligned_cols=368 Identities=23% Similarity=0.282 Sum_probs=248.2
Q ss_pred EEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEEE
Q 008028 87 LVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRVF 166 (580)
Q Consensus 87 I~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (580)
|++++..++|. ..||.+.++..++++|.+.||+|++++................ .......
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~-----------------~~~~~~~- 61 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRL-----------------VGVERLP- 61 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccccc-----------------ccccccc-
Confidence 57888876654 2599999999999999999999999998643222110000000 0000000
Q ss_pred ecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCC-ccchHHHH
Q 008028 167 VDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDW-HTALLPCY 245 (580)
Q Consensus 167 l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~-~~~~l~~~ 245 (580)
....... ..........+.......++... ++|| ++|+|.. ...++...
T Consensus 62 --~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~----------~~~d-ii~~~~~~~~~~~~~~ 111 (377)
T cd03798 62 --VLLPVVP-----------------LLKGPLLYLLAARALLKLLKLKR----------FRPD-LIHAHFAYPDGFAAAL 111 (377)
T ss_pred --cCcchhh-----------------ccccchhHHHHHHHHHHHHhccc----------CCCC-EEEEeccchHHHHHHH
Confidence 0000000 00011112223333333333111 2589 6777633 23333333
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCCCCc---cchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeE
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPVKGR---KINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISG 321 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~---~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~ 321 (580)
+.... ..++ +..|+........ ....++..+..+|.++++|+...+.+.+ .+.+ ..++.+
T Consensus 112 ~~~~~-------~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~------~~~~~~ 175 (377)
T cd03798 112 LKRKL-------GIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKA---LGID------PEKVTV 175 (377)
T ss_pred HHHhc-------CCCEEEEeecchhcccCchhhHHHHHHHHHhcCCeEEeCCHHHHHHHHH---hcCC------CCceEE
Confidence 33221 1233 4555433222222 2345677888999999999999999886 2222 238999
Q ss_pred ecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--C
Q 008028 322 IVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--G 399 (580)
Q Consensus 322 I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~ 399 (580)
++||+|...+.+.... .. .+.+. ..+.++|+|+|++.+.||++.++++++.+.+ +
T Consensus 176 i~~~~~~~~~~~~~~~-------------------~~--~~~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~ 232 (377)
T cd03798 176 IPNGVDTERFSPADRA-------------------EA--RKLGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRP 232 (377)
T ss_pred cCCCcCcccCCCcchH-------------------HH--HhccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCC
Confidence 9999999888765321 00 22222 2456799999999999999999999999876 5
Q ss_pred CeEEEEEecCChhhHHHHHHHHHH--CCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCC
Q 008028 400 NVQIVVLGTGKKPMEQQIEQLEII--CPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 400 ~v~lii~G~g~~~~~~~i~~l~~~--~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~ 477 (580)
+++++|+|.+.. .+.+.++..+ ...++.+.+..+......+++.||++++|+..|++|++++|||++|+|+|+++.
T Consensus 233 ~~~l~i~g~~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~ 310 (377)
T cd03798 233 DVHLVIVGDGPL--REALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDV 310 (377)
T ss_pred CeEEEEEcCCcc--hHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecC
Confidence 899999999862 3344444432 234688888888888889999999999999999999999999999999999999
Q ss_pred CCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 008028 478 GGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLLSM 555 (580)
Q Consensus 478 gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 555 (580)
++..+.+.++.+|+++ ++.|+++++++|.+++++... +.....++.+.+.|||+.+++++.++|+++
T Consensus 311 ~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 311 GGIPEIITDGENGLLV----------PPGDPEALAEAILRLLADPWL-RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred CChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcCcHH-HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 9999999999999998 999999999999999997322 233333344668999999999999998753
No 55
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.97 E-value=2.8e-29 Score=273.59 Aligned_cols=223 Identities=17% Similarity=0.229 Sum_probs=187.6
Q ss_pred HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHH
Q 008028 279 MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEA 358 (580)
Q Consensus 279 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 358 (580)
.+..++.||.|+++|+...+.+.+ .|.+.+ ++.+||||+|.+.|.+....
T Consensus 238 ~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~--------------------- 287 (475)
T cd03813 238 GRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA--------------------- 287 (475)
T ss_pred HHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc---------------------
Confidence 356678999999999998887765 566655 89999999999888664320
Q ss_pred HHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCC--hhhHHHHHHHHHHCC--CCeeEec
Q 008028 359 LQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGK--KPMEQQIEQLEIICP--EKARGIT 432 (580)
Q Consensus 359 ~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~--~~~~~~i~~l~~~~~--~~v~~~~ 432 (580)
.. .++.++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|.++ +.+.++++++..+++ +++.+.+
T Consensus 288 -----~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G 360 (475)
T cd03813 288 -----RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG 360 (475)
T ss_pred -----cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC
Confidence 01 2356899999999999999999999998865 689999999984 456777888777654 5687877
Q ss_pred cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEec------CceeEEEeecccccccCCcc
Q 008028 433 KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKE------GITGFQMRSFHVECDRVDLA 506 (580)
Q Consensus 433 ~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~------~~~G~~~~~~~~~~~~v~~~ 506 (580)
......+++.+|++++||..|++|++++|||+||+|||+|+.||..+++.+ |.+|+++ ++.
T Consensus 361 ---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv----------~~~ 427 (475)
T cd03813 361 ---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV----------PPA 427 (475)
T ss_pred ---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE----------CCC
Confidence 334556999999999999999999999999999999999999999999988 5699998 999
Q ss_pred cHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHHH
Q 008028 507 DVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 507 d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~ 553 (580)
|+++++++|.+++++ ++.+.+|++++ +.+.|+|+.++++|.++|+
T Consensus 428 d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 428 DPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999997 66777777666 5578999999999999984
No 56
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.97 E-value=2.4e-28 Score=261.92 Aligned_cols=217 Identities=17% Similarity=0.142 Sum_probs=170.7
Q ss_pred HHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHH
Q 008028 278 WMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKE 357 (580)
Q Consensus 278 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 357 (580)
+++..++.||.++++|+...+.+.+.. +.. .++.+|+||+|.+.+.+....
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~~--~~~-------~~~~vi~~gvd~~~~~~~~~~-------------------- 232 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSLW--KRN-------TKPSIVYPPCDVEELLKLPLD-------------------- 232 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHHh--CcC-------CCcEEEcCCCCHHHhcccccc--------------------
Confidence 456677899999999999999987621 111 278999999998776543210
Q ss_pred HHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--C-----CeEEEEEecCC----hhhHHHHHHHHHHC--
Q 008028 358 ALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--G-----NVQIVVLGTGK----KPMEQQIEQLEIIC-- 424 (580)
Q Consensus 358 ~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~-----~v~lii~G~g~----~~~~~~i~~l~~~~-- 424 (580)
...+.++|+|+||+.+.||++.+++|+.++.+ + +++|+|+|++. ..+.+.++++..++
T Consensus 233 ---------~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 233 ---------EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred ---------cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 01345799999999999999999999999865 2 59999999874 23566777777654
Q ss_pred CCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCc-ceeEe---cCceeEEEeeccccc
Q 008028 425 PEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL-FDTVK---EGITGFQMRSFHVEC 500 (580)
Q Consensus 425 ~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~-~e~i~---~~~~G~~~~~~~~~~ 500 (580)
.++|.+.+..+.++...+|+.||++++||..|+||++++|||+||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 35799988888888889999999999999999999999999999999999999875 46676 78999986
Q ss_pred ccCCcccHHHHHHHHHHHHHhcChhHHH-HHHHHH--HHhcCCchHHHH
Q 008028 501 DRVDLADVAAIAKHVNRAVATYGTPALK-EMIQNC--MALDLSWKEPAR 546 (580)
Q Consensus 501 ~~v~~~d~~~la~~l~~ll~~~~~~~~~-~~~~~~--~~~~fs~~~~a~ 546 (580)
+ |+++++++|.+++++ ++... .+.+++ ..++|||+.+.+
T Consensus 377 ---~--d~~~la~ai~~ll~~--~~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 ---S--TAEEYAEAIEKILSL--SEEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred ---C--CHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 3 899999999999997 33333 332222 457899987653
No 57
>PLN02949 transferase, transferring glycosyl groups
Probab=99.96 E-value=9.7e-28 Score=258.42 Aligned_cols=227 Identities=14% Similarity=0.073 Sum_probs=178.8
Q ss_pred HHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHH
Q 008028 281 AGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQ 360 (580)
Q Consensus 281 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 360 (580)
...+.+|.++++|++.++.+.+. + +.+ .++.+|+||+|...+.....
T Consensus 216 ~~~~~ad~ii~nS~~t~~~l~~~-~-~~~-------~~i~vvyp~vd~~~~~~~~~------------------------ 262 (463)
T PLN02949 216 LVGRCAHLAMVNSSWTKSHIEAL-W-RIP-------ERIKRVYPPCDTSGLQALPL------------------------ 262 (463)
T ss_pred HHcCCCCEEEECCHHHHHHHHHH-c-CCC-------CCeEEEcCCCCHHHcccCCc------------------------
Confidence 34478999999999999998752 1 111 17889999999765532110
Q ss_pred HHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC------CCeEEEEEecCC----hhhHHHHHHHHHHC--CCCe
Q 008028 361 SQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG------GNVQIVVLGTGK----KPMEQQIEQLEIIC--PEKA 428 (580)
Q Consensus 361 ~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~------~~v~lii~G~g~----~~~~~~i~~l~~~~--~~~v 428 (580)
....+.++|+++||+.++||++.+|+|+.++.+ ++++|+|+|++. .++.++++++..++ .+++
T Consensus 263 -----~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V 337 (463)
T PLN02949 263 -----ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDV 337 (463)
T ss_pred -----cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcE
Confidence 001244689999999999999999999988643 579999999974 23446677777655 4679
Q ss_pred eEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcc-eeEec---CceeEEEeecccccccCC
Q 008028 429 RGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLF-DTVKE---GITGFQMRSFHVECDRVD 504 (580)
Q Consensus 429 ~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~-e~i~~---~~~G~~~~~~~~~~~~v~ 504 (580)
.+.+..+.++...+|+.||++++||..|+||++++|||++|+|||+++.||.. |++.+ +.+|+++
T Consensus 338 ~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~----------- 406 (463)
T PLN02949 338 EFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA----------- 406 (463)
T ss_pred EEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC-----------
Confidence 99888888888889999999999999999999999999999999999999975 66655 6789974
Q ss_pred cccHHHHHHHHHHHHHhcChhHHHHHHHHHH--HhcCCchHHHHHHHHHHHHHHhc
Q 008028 505 LADVAAIAKHVNRAVATYGTPALKEMIQNCM--ALDLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 505 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~~~ 558 (580)
.|+++++++|.+++++ +++.+.+|++++. .++|||++++++|.+.|.++++.
T Consensus 407 -~~~~~la~ai~~ll~~-~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 407 -TTVEEYADAILEVLRM-RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred -CCHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 4899999999999985 2455566666652 36799999999999999988764
No 58
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1e-29 Score=276.34 Aligned_cols=504 Identities=19% Similarity=0.171 Sum_probs=347.2
Q ss_pred cccccccccccccHHHHHhhhhchhhhhhcccccCCCCCCCc-cccc--------CCCce-EEEEeec-----ccCcccc
Q 008028 36 MTHSGLRSLNTIDRLQMKSYAKAVVTKATKNEQQTPNNVPSK-KIIC--------QQGMN-LVFVGAE-----VAPWSKT 100 (580)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~mk-I~~vs~e-----~~P~~~~ 100 (580)
..|||++.+-..+..+......+..+.....-...-...++. ...| ...|+ ++++++| ..|.+ .
T Consensus 36 a~~~~v~~~~~~~~~~~~~~~~~~~~~~~yy~s~efL~grl~~~~l~n~g~~~~~~~~l~~~~~~~~e~~~~e~~p~l-g 114 (750)
T COG0058 36 ALHNPVRELLAADWLRLNQLARDEDFKQVYYLSMEFLIGRLLGNNLWNLGIYDDVQEALKELGYFLMEFGEHESDPGL-G 114 (750)
T ss_pred HhhHHHHHHHhcCHHHHHHhhcchhHHHHHHHHHHHHHHHhhhcchhhhcchHHHHhhHHhhhccHHHHhhcccCccc-c
Confidence 468999999988888888776666554433222211111221 1122 22355 8888887 45888 5
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEEecCCc--------------cccccC--------------CcEEEEEEeCC-eEEE
Q 008028 101 GGLGDVLGGLPPALAARGHRVMSVAPRYDQ--------------YKDAWD--------------TSVLAEVKVGD-SIET 151 (580)
Q Consensus 101 GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~--------------~~~~~~--------------~~~~~~~~~~~-~~~~ 151 (580)
||+|++++.+.++++.+|.+.+.++.+|++ .++.|. ....+++...+ +...
T Consensus 115 GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~~~~~~ 194 (750)
T COG0058 115 GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYDNRVVT 194 (750)
T ss_pred ccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEeccCcEEE
Confidence 999999999999999999999999999861 122222 22234455555 7889
Q ss_pred EEEEEEEecCeeEEEecCccchhhhccC--CCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhc-cCCCCCCCCCCCC
Q 008028 152 VRFFHCYKRGVDRVFVDHPVFLEKVWGK--TGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILN-LNNNKYFSGPYGE 228 (580)
Q Consensus 152 ~~~~~~~~~gv~~~~l~~~~~~~~~~~~--~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~-~~~~~~~~~~~~p 228 (580)
+|+|....+.+++++++++.-.++.+.+ |. .+|++.+ .+.|+.|..+|+.++++.+..+. ... +.+.+
T Consensus 195 lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~-~LYp~Ds---~elRl~Qeyfl~~agvq~I~~~~~~~~-----~~~~~ 265 (750)
T COG0058 195 LRLWQAQVGRVPLYLLDFNVGENKNDARNITR-VLYPGDS---KELRLKQEYFLGSAGVQDILARGHLEH-----HDLDV 265 (750)
T ss_pred EEEEEEecCccceEeecCCCcccchhhhhHHh-hcCCCCc---HHHHHhhhheeeeHHHHHHHHHhhhcc-----ccccc
Confidence 9999999999999999988765555555 44 8998733 67788999999999999888773 110 01123
Q ss_pred ceEEEecCCccchHHHH-HHHhhhccCcccc-------ceE-EEcC--------------------CCCCC---------
Q 008028 229 DVLFIGNDWHTALLPCY-LKFMYQSKGIHKN-------AKR-LCRP--------------------RYDKP--------- 270 (580)
Q Consensus 229 DvVih~~~~~~~~l~~~-l~~~~~~~gi~~~-------~~~-~~l~--------------------~~~~~--------- 270 (580)
- +.|+||.|++++... ++.+....|+-.. ... ||-| .+...
T Consensus 266 ~-~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l 344 (750)
T COG0058 266 L-ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFL 344 (750)
T ss_pred h-hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhh
Confidence 3 788999999998887 5545444333221 111 4422 00000
Q ss_pred ------------CCCcc---chHHHHHHhcCceeEeeCHHHHHHHH---ccccCCcchhhhhhcCCeeEecCCCCCCCcC
Q 008028 271 ------------VKGRK---INWMKAGILESDRVLTVSPHYAKELI---SGEEKGVELDNIIRKTGISGIVNGMDVQEWN 332 (580)
Q Consensus 271 ------------~~~~~---~~~~~~~~~~ad~vi~vS~~~~~~l~---~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~ 332 (580)
..... ++|...++..|..+++||+-..+-+. ...++++.+. ||.-++|||+..+|.
T Consensus 345 ~~~~~~~~~~~~~~~~~i~~v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p~------~i~nvTNGIt~rrWl 418 (750)
T COG0058 345 PEVRLLYLGDLIRRGSPIEEVNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYPE------KINNVTNGITPRRWL 418 (750)
T ss_pred HHHHhhccccccccCCcccceehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCcc------ccccccCCcCCchhh
Confidence 00111 78888899999999999995555443 3334454433 899999999999998
Q ss_pred CCCccccccccCch--------------------------hhhccchHHHHHH----HHHcCCCCCCCCcEEEEEccCcc
Q 008028 333 PSTDRYINVNYDAT--------------------------TVMNAKPLVKEAL----QSQLGLPVDRNIPLIGFIGRLEE 382 (580)
Q Consensus 333 ~~~~~~l~~~~~~~--------------------------~~~~~~~~~~~~~----~~~~glp~~~~~~~i~f~Grl~~ 382 (580)
....+.|...|+.+ .+...|..++..+ ..+.|+..+++.++++|+.|+.+
T Consensus 419 ~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRihe 498 (750)
T COG0058 419 APANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHE 498 (750)
T ss_pred hhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhh
Confidence 77777676666655 2333444455433 34568888899999999999999
Q ss_pred ccCHHHHHHHHhhhcC-------CCeEEEEEecCC------hhhHHHHHHHHHHC--CCCeeEeccCChHHHHHHHhcCC
Q 008028 383 QKGSDILAQAIPKFMG-------GNVQIVVLGTGK------KPMEQQIEQLEIIC--PEKARGITKFSTPLAHKIIAGAD 447 (580)
Q Consensus 383 ~Kg~~~ll~a~~~l~~-------~~v~lii~G~g~------~~~~~~i~~l~~~~--~~~v~~~~~~~~~~~~~~~~~aD 447 (580)
||+..+.+..+.++.+ ++++++|+|+.. +.+++.+...+... ..+|+|+.+|+..++..++.+||
T Consensus 499 YKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~iipa~D 578 (750)
T COG0058 499 YKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAELLIPAAD 578 (750)
T ss_pred hhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHhhccccc
Confidence 9999988877766533 568999999953 56777787777753 35799999999999999999999
Q ss_pred EEEecCC--CCCccHHHHHHHHcCCceEEcCCCCcceeEe--cCceeEEEeeccccc-----ccCCcc-cHHHHHHHHHH
Q 008028 448 FMLVPSR--FEPCGLIQLHAMRYGTVPIVASTGGLFDTVK--EGITGFQMRSFHVEC-----DRVDLA-DVAAIAKHVNR 517 (580)
Q Consensus 448 i~l~ps~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~--~~~~G~~~~~~~~~~-----~~v~~~-d~~~la~~l~~ 517 (580)
++.+.|+ .|++|++.|++|.+|.+-|.|-.|.+.|..+ .+.|||.||.-..+. +-.++. +...+...|..
T Consensus 579 vweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~~~~v~~ 658 (750)
T COG0058 579 VWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYYELENEVKP 658 (750)
T ss_pred ccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHHHHhHHHHH
Confidence 9999998 6999999999999999888877777777664 789999999333211 111222 33344444555
Q ss_pred HHHhc----ChhHHHHHHHHHHH---hcCCchHHHHHH-HHHHHHHH
Q 008028 518 AVATY----GTPALKEMIQNCMA---LDLSWKEPARLW-EKMLLSME 556 (580)
Q Consensus 518 ll~~~----~~~~~~~~~~~~~~---~~fs~~~~a~~~-~~~~~~l~ 556 (580)
++... ..+.|..+.++++. ..|+.+++...| .+.|..+.
T Consensus 659 ~~~~~~~~~~~p~~~~~~~~~~~sl~~~~~~dr~~~~yd~~~Y~~aq 705 (750)
T COG0058 659 VLDEIIDGRFSPGWKSRFKNLIDSLLPKFGTDRMMVLYDFKAYVPAQ 705 (750)
T ss_pred HHHHHhcccCCcccHHHHHHHHHHhhhccCccHHHHHHHHHHHHHHH
Confidence 54421 01267888888754 358877877666 44555544
No 59
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.96 E-value=4e-27 Score=252.35 Aligned_cols=223 Identities=14% Similarity=0.098 Sum_probs=166.9
Q ss_pred HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHH
Q 008028 279 MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEA 358 (580)
Q Consensus 279 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 358 (580)
++..++.+|.++++|+.+++.+.+ .|.+.+ ++.+|+||. ...|.|..... ....
T Consensus 154 e~~~~~~ad~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~~----------------~~~~ 207 (415)
T cd03816 154 EKLFGRLADYNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLEE----------------KHEL 207 (415)
T ss_pred HHHHhhcCCEeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHHH----------------HHHH
Confidence 455677899999999999999975 455444 999999994 45565542210 0111
Q ss_pred HHH-------------HcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--------CCeEEEEEecCChhhHHHH
Q 008028 359 LQS-------------QLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--------GNVQIVVLGTGKKPMEQQI 417 (580)
Q Consensus 359 ~~~-------------~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--------~~v~lii~G~g~~~~~~~i 417 (580)
+.+ ..+++. ++..+++++||+.+.||++.|++|+..+.+ ++++|+|+|+|+ .++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~--~~~~l 284 (415)
T cd03816 208 FLKLAKTFLTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP--LKEKY 284 (415)
T ss_pred HHhccccccccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc--cHHHH
Confidence 111 112221 244678899999999999999999999853 469999999997 45666
Q ss_pred HHHHHHCC-CCeeEecc-CChHHHHHHHhcCCEEEecCC---CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEE
Q 008028 418 EQLEIICP-EKARGITK-FSTPLAHKIIAGADFMLVPSR---FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQ 492 (580)
Q Consensus 418 ~~l~~~~~-~~v~~~~~-~~~~~~~~~~~~aDi~l~ps~---~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~ 492 (580)
+++..+++ .+++++.. .+.+....+|+.||+++.++. .|++|++++|||+||+|||+|+.||..|++.++.+|++
T Consensus 285 ~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~l 364 (415)
T cd03816 285 LERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLV 364 (415)
T ss_pred HHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEE
Confidence 66666554 24666654 466778889999999987532 47899999999999999999999999999999999998
Q ss_pred EeecccccccCCcccHHHHHHHHHHHHHhc-ChhHHHHHHHHHHH-hcCCch
Q 008028 493 MRSFHVECDRVDLADVAAIAKHVNRAVATY-GTPALKEMIQNCMA-LDLSWK 542 (580)
Q Consensus 493 ~~~~~~~~~~v~~~d~~~la~~l~~ll~~~-~~~~~~~~~~~~~~-~~fs~~ 542 (580)
+ + |+++++++|.+++++. +++.+.+|++++.+ ..++|+
T Consensus 365 v----------~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~ 404 (415)
T cd03816 365 F----------G--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWD 404 (415)
T ss_pred E----------C--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHH
Confidence 6 4 8999999999999962 25677888887743 345554
No 60
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=4.7e-28 Score=258.32 Aligned_cols=415 Identities=16% Similarity=0.179 Sum_probs=244.4
Q ss_pred ccccHHHHhccchHHHH-hCCCeEEEEEecCCccc--cccCCcEE---EE--E-EeCCeEEEEEEEEEEecCeeEE-Eec
Q 008028 99 KTGGLGDVLGGLPPALA-ARGHRVMSVAPRYDQYK--DAWDTSVL---AE--V-KVGDSIETVRFFHCYKRGVDRV-FVD 168 (580)
Q Consensus 99 ~~GG~g~~~~~l~~aL~-~~G~~V~vi~~~y~~~~--~~~~~~~~---~~--~-~~~~~~~~~~~~~~~~~gv~~~-~l~ 168 (580)
|.||+-.++..-++.+. +.|-+..+|+|....-. +....... .. + .+..+...+++-+..++|-+.+ ++|
T Consensus 14 KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~G~P~viL~D 93 (590)
T cd03793 14 KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIEGYPKVVLFD 93 (590)
T ss_pred cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcCCCCeEEEEe
Confidence 47998888888777765 46888999988754111 10000000 00 0 0011223455556667776654 455
Q ss_pred Ccc-------chhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHh-ccCCCCCCCCCCCCceEEEecCCccc
Q 008028 169 HPV-------FLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRIL-NLNNNKYFSGPYGEDVLFIGNDWHTA 240 (580)
Q Consensus 169 ~~~-------~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l-~~~~~~~~~~~~~pDvVih~~~~~~~ 240 (580)
... +...+|...| +=.+....|+.+. ..|.+++...++.+... .. -++| |+|+|||+++
T Consensus 94 ~~~~~~~~~~~~~~lW~~~~--i~s~~~~~d~nea-~~fgy~~~~~i~~~~~~~~~---------~~~d-ViH~HeWm~g 160 (590)
T cd03793 94 IGSAAWKLDEWKGELWELCG--IGSPEGDRETNDA-IIFGFLVAWFLGEFAEQFDD---------EPAV-VAHFHEWQAG 160 (590)
T ss_pred CchhhhhHHHHHHHHHHHcC--CCCCCCCCcchHH-HHHHHHHHHHHHHHHhhccC---------CCCe-EEEEcchhHh
Confidence 533 3344564422 1112222333332 22444433333322221 11 1478 9999999999
Q ss_pred hHHHHHHHh-hhccCccccceEEEcCCCCCCC---------C-----------------CccchHHHHHHhcCceeEeeC
Q 008028 241 LLPCYLKFM-YQSKGIHKNAKRLCRPRYDKPV---------K-----------------GRKINWMKAGILESDRVLTVS 293 (580)
Q Consensus 241 ~l~~~l~~~-~~~~gi~~~~~~~~l~~~~~~~---------~-----------------~~~~~~~~~~~~~ad~vi~vS 293 (580)
..+.++|.. .. ...++|.|...... . .....+++.+...||.+++||
T Consensus 161 ~a~~~lK~~~~~------VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS 234 (590)
T cd03793 161 VGLPLLRKRKVD------VSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVS 234 (590)
T ss_pred HHHHHHHHhCCC------CCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECC
Confidence 999999853 21 12235544211110 0 112236778889999999999
Q ss_pred HHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHH----HHHHHHHcCCCCCC
Q 008028 294 PHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLV----KEALQSQLGLPVDR 369 (580)
Q Consensus 294 ~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~glp~~~ 369 (580)
+.+++++.. .++.+++ + +||||+|...|.+..+.. +. ...+|... +..++..++++ +
T Consensus 235 ~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~~---~~----~~~~k~ki~~f~~~~~~~~~~~~--~ 295 (590)
T cd03793 235 EITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEFQ---NL----HAQSKEKINEFVRGHFYGHYDFD--L 295 (590)
T ss_pred hHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhhh---hh----hHHhhhhhhHHHHHHHhhhcCCC--C
Confidence 999999986 3456554 3 999999999987653210 00 00111111 22345556663 4
Q ss_pred CCcEEEE-EccCcc-ccCHHHHHHHHhhhcC------CC--e-EEEEE-ec-C---------C---hhhHHHHHHH----
Q 008028 370 NIPLIGF-IGRLEE-QKGSDILAQAIPKFMG------GN--V-QIVVL-GT-G---------K---KPMEQQIEQL---- 420 (580)
Q Consensus 370 ~~~~i~f-~Grl~~-~Kg~~~ll~a~~~l~~------~~--v-~lii~-G~-g---------~---~~~~~~i~~l---- 420 (580)
+.++++| +||++. +||+|.+|+|+.+|.. .+ | -|+|+ +. . . +.+++.+.++
T Consensus 296 d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i 375 (590)
T cd03793 296 DKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKI 375 (590)
T ss_pred CCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHh
Confidence 5567777 799998 9999999999999865 11 2 33333 22 1 0 1122222221
Q ss_pred ---------------------------------------------------------------HHH----CCCCeeEecc
Q 008028 421 ---------------------------------------------------------------EII----CPEKARGITK 433 (580)
Q Consensus 421 ---------------------------------------------------------------~~~----~~~~v~~~~~ 433 (580)
..- .+.+++|++.
T Consensus 376 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~ 455 (590)
T cd03793 376 GKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPE 455 (590)
T ss_pred hhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEccc
Confidence 110 0114666665
Q ss_pred CCh-------HHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCc----ceeEecC-ceeEEEeecccccc
Q 008028 434 FST-------PLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL----FDTVKEG-ITGFQMRSFHVECD 501 (580)
Q Consensus 434 ~~~-------~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~----~e~i~~~-~~G~~~~~~~~~~~ 501 (580)
|.. .....++++||++++||++|+||++.+|||+||+|+|+|+.+|+ .|.+.++ ..|..+-...++
T Consensus 456 ~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~-- 533 (590)
T cd03793 456 FLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFK-- 533 (590)
T ss_pred ccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCcc--
Confidence 521 12346899999999999999999999999999999999999998 4554443 356665100000
Q ss_pred cCCcccHHHHHHHHHHHHHhcChhHHHHHHHH----HHHhcCCchHHHHHHHHHHHHHHh
Q 008028 502 RVDLADVAAIAKHVNRAVATYGTPALKEMIQN----CMALDLSWKEPARLWEKMLLSMEV 557 (580)
Q Consensus 502 ~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~----~~~~~fs~~~~a~~~~~~~~~l~~ 557 (580)
--+.++++++++|.++++. +.+..+.++ ..++.|+|++.++.|.+.|..++.
T Consensus 534 -~~~e~v~~La~~m~~~~~~---~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 534 -SPDESVQQLTQYMYEFCQL---SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred -chHHHHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 0156788888888888753 333333333 245789999999999999997764
No 61
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.95 E-value=2.3e-26 Score=236.77 Aligned_cols=331 Identities=21% Similarity=0.229 Sum_probs=218.2
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++++..+. .||.+.++..++++|.+.||+|.+++............... . .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~------------~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNV------------K-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccch------------h-------hhcee
Confidence 6899998742 59999999999999999999999999864322111000000 0 00000
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCC-ccchHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDW-HTALLPC 244 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~-~~~~l~~ 244 (580)
.... ..+ ..........+.++.. +|| ++++|.. .+.++..
T Consensus 58 ~~~~-------------~~~-------------~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 98 (353)
T cd03811 58 VLKL-------------KSL-------------RDLLAILRLRRLLRKE------------KPD-VVISHLTTTPNVLAL 98 (353)
T ss_pred eeec-------------ccc-------------cchhHHHHHHHHHHhc------------CCC-EEEEcCccchhHHHH
Confidence 0000 000 0011222233333332 489 7777765 3333322
Q ss_pred HHHHhhhccCccccceE-EEcCCCCCCCCCccch---HHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCee
Q 008028 245 YLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKIN---WMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGIS 320 (580)
Q Consensus 245 ~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~---~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~ 320 (580)
..+.. ..++ +++|+........... ..+..+..+|.++++|+...+.+.+. .+.+. .++.
T Consensus 99 ~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~~~~~------~~~~ 162 (353)
T cd03811 99 LAARL--------GTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL--LGIPP------DKIE 162 (353)
T ss_pred HHhhc--------CCceEEEEcCcchhhhccchhHHHHHHhhccccceEEEeccchhhhHHHh--hcCCc------cccE
Confidence 22211 2333 5555443332222222 45778889999999999999999873 22222 2899
Q ss_pred EecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--
Q 008028 321 GIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG-- 398 (580)
Q Consensus 321 ~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~-- 398 (580)
+|+||+|...+.+.... .. ..+. ..+.++|+|+||+.+.||++.++++++++.+
T Consensus 163 vi~~~~~~~~~~~~~~~-------------------~~---~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~ 218 (353)
T cd03811 163 VIYNPIDIEEIRALAEE-------------------PL---ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLRKEG 218 (353)
T ss_pred EecCCcChhhcCcccch-------------------hh---hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhhhcC
Confidence 99999998877655321 00 1222 2456899999999999999999999999976
Q ss_pred CCeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 399 GNVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 399 ~~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
++++|+|+|.+.. ...++++..+.+ .++.+.+.. +....+++.||++++||.+|++|++++|||++|+|+|+++
T Consensus 219 ~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~ 294 (353)
T cd03811 219 PDARLVILGDGPL--REELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATD 294 (353)
T ss_pred CCceEEEEcCCcc--HHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcC
Confidence 5899999998872 334444444332 456666553 2355799999999999999999999999999999999999
Q ss_pred CCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcC-hhHHHHHHH
Q 008028 477 TGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYG-TPALKEMIQ 532 (580)
Q Consensus 477 ~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~-~~~~~~~~~ 532 (580)
.||..|++.++.+|+++ ++.|++++++.+..+..... ++.+.++.+
T Consensus 295 ~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 295 CPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred CCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 99999999999999998 99999999544444444322 445555555
No 62
>PHA01633 putative glycosyl transferase group 1
Probab=99.95 E-value=7.3e-26 Score=232.11 Aligned_cols=225 Identities=16% Similarity=0.202 Sum_probs=169.1
Q ss_pred hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHH
Q 008028 277 NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVK 356 (580)
Q Consensus 277 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 356 (580)
++....+.+.+.++++|+..++.+.+ .|++. . ..|+||+|.+.|.|.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~-i~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------D-LPVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------c-eeeeCCCChhhcCccchh------------------h
Confidence 34455666778999999999999986 46552 2 347899999988775321 2
Q ss_pred HHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--C----CeEEEEEecCChhhHHHHHHHHHHCCCCeeE
Q 008028 357 EALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--G----NVQIVVLGTGKKPMEQQIEQLEIICPEKARG 430 (580)
Q Consensus 357 ~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~----~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~ 430 (580)
..++++++.+. ++.++|+++||+.++||++.|++|++++.+ + +++++++|.+ .++++ ..++++.+
T Consensus 135 ~~~r~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l--~l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQL--EVPANVHF 205 (335)
T ss_pred HHHHHHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHc--CCCCcEEE
Confidence 34566665432 255799999999999999999999999865 2 4688888742 23332 24456877
Q ss_pred eccC---ChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEec------------------Cce
Q 008028 431 ITKF---STPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKE------------------GIT 489 (580)
Q Consensus 431 ~~~~---~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~------------------~~~ 489 (580)
.+.+ +...+..+|++||++|+||++|+||++++|||+||+|||+|+.+|+.|++.+ ..+
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 7533 4566778999999999999999999999999999999999999999886432 234
Q ss_pred eEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHH
Q 008028 490 GFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEK 550 (580)
Q Consensus 490 G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~ 550 (580)
||.+ ++.|+++++++|.++++.++++.+ .+.....++.|+|+.++++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 6665 889999999999999886434333 3322346689999999999974
No 63
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.95 E-value=1.3e-26 Score=247.30 Aligned_cols=221 Identities=15% Similarity=0.123 Sum_probs=167.8
Q ss_pred HHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHH
Q 008028 278 WMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKE 357 (580)
Q Consensus 278 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 357 (580)
+++..++.+|.++++|+..++.+.+. .+... .++.+|+||+|.+.|.+.....
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~~------~~v~vipngvd~~~f~~~~~~~------------------- 217 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRRL--APEAA------GRITAFPNGVDADFFSPDRDYP------------------- 217 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHHh--CCCCC------CCeEEeecccchhhcCCCcccc-------------------
Confidence 45667789999999999999998752 12222 2889999999998887643210
Q ss_pred HHHHHcCCCCCCCCcEEEEEccCccccCHHHHH----HHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEe
Q 008028 358 ALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILA----QAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGI 431 (580)
Q Consensus 358 ~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll----~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~ 431 (580)
..+ .++.++|+|+||+.+.||++.++ ++++.+.+ ++++|+|+|+|+. +.++++... .++.+.
T Consensus 218 -----~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~~ 285 (397)
T TIGR03087 218 -----NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTVT 285 (397)
T ss_pred -----CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEEe
Confidence 001 13457899999999999999888 44555543 7899999999873 345555433 347776
Q ss_pred ccCChHHHHHHHhcCCEEEecCC-CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHH
Q 008028 432 TKFSTPLAHKIIAGADFMLVPSR-FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAA 510 (580)
Q Consensus 432 ~~~~~~~~~~~~~~aDi~l~ps~-~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~ 510 (580)
+..+ ....+++.||++++||+ .|++|++++|||+||+|||+|+.++ ..+...+++|+++ + .|+++
T Consensus 286 G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv----------~-~~~~~ 351 (397)
T TIGR03087 286 GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLV----------A-ADPAD 351 (397)
T ss_pred eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEe----------C-CCHHH
Confidence 6554 34569999999999998 4999999999999999999999754 2333345678876 5 89999
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHHH
Q 008028 511 IAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 511 la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~ 553 (580)
++++|.+++++ ++.+.+|++++ +.++|||+.+++++.++|.
T Consensus 352 la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 352 FAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999999987 66677777766 4578999999999999875
No 64
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=1.9e-26 Score=238.67 Aligned_cols=230 Identities=14% Similarity=0.178 Sum_probs=171.0
Q ss_pred HHHHH-HhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHH
Q 008028 278 WMKAG-ILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVK 356 (580)
Q Consensus 278 ~~~~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 356 (580)
++... .+.+|.++++|+..++.+.+ .|++. ..++.+||||+|.+.|.+....
T Consensus 86 ~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------- 138 (331)
T PHA01630 86 ALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------- 138 (331)
T ss_pred HHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc-------------------
Confidence 44445 56899999999999999876 34431 1289999999998888654210
Q ss_pred HHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccC
Q 008028 357 EALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKF 434 (580)
Q Consensus 357 ~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~ 434 (580)
..+.++++++|++.++||++.|++|++++.+ ++++++|+|++..+. .+. ...+ + ....
T Consensus 139 -----------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~--~l~----~~~~-~--~~~v 198 (331)
T PHA01630 139 -----------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDP--RLF----GLNG-V--KTPL 198 (331)
T ss_pred -----------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccch--hhc----cccc-e--eccC
Confidence 1233577888899999999999999999865 689999999765321 111 1111 1 1223
Q ss_pred ChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecc---------cccccCCc
Q 008028 435 STPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFH---------VECDRVDL 505 (580)
Q Consensus 435 ~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~---------~~~~~v~~ 505 (580)
+.+....+|+.||++++||++|+||++++|||+||+|||+|+.||+.|++.++.+|+++..-. -.|-.+-+
T Consensus 199 ~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~ 278 (331)
T PHA01630 199 PDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLD 278 (331)
T ss_pred CHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccC
Confidence 456677899999999999999999999999999999999999999999999999988873100 00111113
Q ss_pred ccHHHHHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHHHH
Q 008028 506 ADVAAIAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 506 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~ 554 (580)
.|.+++++++.+++.+++++.+.+++.++ ..++|||++++++|+++|++
T Consensus 279 ~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 279 PDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 47888889999999874345555554443 56899999999999999974
No 65
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.95 E-value=2.1e-26 Score=241.12 Aligned_cols=205 Identities=21% Similarity=0.277 Sum_probs=168.5
Q ss_pred HHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHH
Q 008028 278 WMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKE 357 (580)
Q Consensus 278 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 357 (580)
+++..++.+|.++++|+.+++.+.+.+ + .+..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~~--~---------~~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKYY--G---------RDATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHHh--C---------CCcEEECCCCCHhhcCcCC----------------------
Confidence 345567899999999999999997521 1 1567899999988776542
Q ss_pred HHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChH
Q 008028 358 ALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTP 437 (580)
Q Consensus 358 ~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~ 437 (580)
...+.++|+||+.++||++.+++|+.++ +++|+|+|+|+. .+.+++ ....+|.+.+..+.+
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~---~~~l~ivG~g~~--~~~l~~---~~~~~V~~~g~~~~~ 253 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKL---GKRLVVIGDGPE--LDRLRA---KAGPNVTFLGRVSDE 253 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHC---CCcEEEEECChh--HHHHHh---hcCCCEEEecCCCHH
Confidence 1235799999999999999999999987 389999999873 344444 445679999988888
Q ss_pred HHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHH
Q 008028 438 LAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNR 517 (580)
Q Consensus 438 ~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ 517 (580)
.+..+++.||++++||. |++|++.+|||+||+|||+++.||..|++.++.+|+++ ++.|+++++++|.+
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~~ 322 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVER 322 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHHH
Confidence 88899999999999999 99999999999999999999999999999999999998 99999999999999
Q ss_pred HHHhcChhHHHHHHHHHHHhcCCchHHHHHH
Q 008028 518 AVATYGTPALKEMIQNCMALDLSWKEPARLW 548 (580)
Q Consensus 518 ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~ 548 (580)
++++.. ....++.+++ +.|+|+++.+++
T Consensus 323 l~~~~~-~~~~~~~~~~--~~~~~~~~~~~~ 350 (351)
T cd03804 323 FEKNED-FDPQAIRAHA--ERFSESRFREKI 350 (351)
T ss_pred HHhCcc-cCHHHHHHHH--HhcCHHHHHHHh
Confidence 999732 2333343332 579999988765
No 66
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.95 E-value=2.5e-25 Score=239.59 Aligned_cols=207 Identities=16% Similarity=0.175 Sum_probs=157.1
Q ss_pred CceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCC
Q 008028 286 SDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGL 365 (580)
Q Consensus 286 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gl 365 (580)
||.|+++|..+. .+.. .+....||||...|.|... ...++++++
T Consensus 499 cD~VIaPS~atq-~L~~---------------~vI~nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQ-DLPK---------------SVICNVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHH-Hhcc---------------cceeecccccccccCCcch--------------------hHHHHhcCC
Confidence 899999997666 3321 2222237999999988642 122245666
Q ss_pred CCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHH
Q 008028 366 PVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKII 443 (580)
Q Consensus 366 p~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~ 443 (580)
+..+ ..++|+||+.+.||++.|++|+..+.+ ++++|+|+|+|+ .++.++++..+++..+.+.+..+ ....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~d--d~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGRD--HADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCCC--CHHHHH
Confidence 5333 458999999999999999999998855 589999999998 46667776666554565554322 233589
Q ss_pred hcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcC
Q 008028 444 AGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYG 523 (580)
Q Consensus 444 ~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 523 (580)
+.+|++++||..|++|++++||||||+|||+++.+|. +++.++.+|+. ..|+++++++|.+++++
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd-- 681 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALAN-- 681 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhC--
Confidence 9999999999999999999999999999999999985 44777778885 37899999999999997
Q ss_pred hhHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 008028 524 TPALKEMIQNCMALDLSWKEPARLWEKML 552 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~ 552 (580)
++....+.+ ...|||+..++++++.-
T Consensus 682 ~~~rl~~~a---~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 682 EPQPLTPEQ---RYNLSWEAATQRFMEYS 707 (794)
T ss_pred chhhhHHHH---HhhCCHHHHHHHHHHhh
Confidence 333222221 34899999999998864
No 67
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.95 E-value=1.2e-25 Score=244.46 Aligned_cols=222 Identities=16% Similarity=0.113 Sum_probs=171.0
Q ss_pred HhcCceeEeeCHHHHHHHHcccc-CCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHH
Q 008028 283 ILESDRVLTVSPHYAKELISGEE-KGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQS 361 (580)
Q Consensus 283 ~~~ad~vi~vS~~~~~~l~~~~~-~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 361 (580)
...+|.++++|+..++.+.+.+. ++.. ..++.+||||++.....+..
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~~~~~~~------~~ki~viP~g~~~~~~~~~~-------------------------- 315 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQFKKYYNI------EPRIYTIPVGSLDELQYPEQ-------------------------- 315 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHhhhhcCC------CCcEEEEcCCCcccccCccc--------------------------
Confidence 45679999999998888775221 1211 22899999998654332211
Q ss_pred HcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChH
Q 008028 362 QLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTP 437 (580)
Q Consensus 362 ~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~ 437 (580)
......|+|+||+.+.||++.|++|+.++.+ ++++|+|+|.|+ ..+.++++..+++ +++.+.+ +.
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G-~~-- 384 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKG-HR-- 384 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcC-CC--
Confidence 1233689999999999999999999999865 799999999987 3466777766553 4566666 33
Q ss_pred HHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCC-CcceeEecCceeEEEe-ecccccccCCccc-HHHHHHH
Q 008028 438 LAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTG-GLFDTVKEGITGFQMR-SFHVECDRVDLAD-VAAIAKH 514 (580)
Q Consensus 438 ~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~g-g~~e~i~~~~~G~~~~-~~~~~~~~v~~~d-~~~la~~ 514 (580)
....+++.||++++||+.|+||++++|||+||+|||+++.+ |..|++.++.+|+++. .+..+ ++.| ++++|++
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~----d~~~~~~~la~~ 460 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED----DEDQIITALAEK 460 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc----chhHHHHHHHHH
Confidence 24468999999999999999999999999999999999986 8999999999999982 00000 1223 8899999
Q ss_pred HHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHHHH
Q 008028 515 VNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 515 l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~ 554 (580)
|.++++ ++.+.+|++++ .++.|||+.++++|.+++++
T Consensus 461 I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 461 IVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999994 44677787777 44789999999999998875
No 68
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.94 E-value=4.6e-25 Score=235.89 Aligned_cols=263 Identities=16% Similarity=0.133 Sum_probs=195.5
Q ss_pred CCceEEEecCCcc-chHHHHHHHhhhccCccccceE-EEcCCCCCC---CCCccchHHHHHHhcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGNDWHT-ALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKP---VKGRKINWMKAGILESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~~~~~-~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~---~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~ 301 (580)
..| |+|.+..+. ++....++..+ ...++ .+.|+++-. .......+.+..++.+|.++++|+...+.+.
T Consensus 127 ~~~-v~~sy~~~~~~~~~~~l~~~~------~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~ 199 (407)
T cd04946 127 QGT-VFYSYWLHETAYALALLKKEY------LRKRVISRAHGYDLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQ 199 (407)
T ss_pred Cce-EEEEecCchHHHHHHHHHHhc------CCceEEEEeccchhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHH
Confidence 456 777764333 22222333322 12234 666755322 1122334456677899999999999999988
Q ss_pred ccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCc
Q 008028 302 SGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLE 381 (580)
Q Consensus 302 ~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~ 381 (580)
+. ++...+ ++.+++||++...+.+... ..+.++|+|+||+.
T Consensus 200 ~~--~~~~~~------ki~vi~~gv~~~~~~~~~~-------------------------------~~~~~~il~~Grl~ 240 (407)
T cd04946 200 KR--YPAYKE------KIKVSYLGVSDPGIISKPS-------------------------------KDDTLRIVSCSYLV 240 (407)
T ss_pred HH--CCCccc------cEEEEECCcccccccCCCC-------------------------------CCCCEEEEEeeccc
Confidence 63 333333 8899999999766543210 13457899999999
Q ss_pred cccCHHHHHHHHhhhcC--C--CeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhc--CCEEEecC
Q 008028 382 EQKGSDILAQAIPKFMG--G--NVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAG--ADFMLVPS 453 (580)
Q Consensus 382 ~~Kg~~~ll~a~~~l~~--~--~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~--aDi~l~ps 453 (580)
+.||++.+++++.++.+ + +++++++|+|. ..+.++++..+.+ +++.+.+..+..++..+++. +|++++||
T Consensus 241 ~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S 318 (407)
T cd04946 241 PVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLS 318 (407)
T ss_pred cccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCC
Confidence 99999999999999866 2 57788899887 4555666654433 46888887777777777764 88999999
Q ss_pred CCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCc-ccHHHHHHHHHHHHHhcChhHHHHHHH
Q 008028 454 RFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDL-ADVAAIAKHVNRAVATYGTPALKEMIQ 532 (580)
Q Consensus 454 ~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~-~d~~~la~~l~~ll~~~~~~~~~~~~~ 532 (580)
..|++|++++|||++|+|||+|+.||..|++.++.+|+++ ++ .|+++++++|.+++++ ++.+.+|++
T Consensus 319 ~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~~~~la~~I~~ll~~--~~~~~~m~~ 386 (407)
T cd04946 319 ESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPTPNELVSSLSKFIDN--EEEYQTMRE 386 (407)
T ss_pred ccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCCHHHHHHHHHHHHhC--HHHHHHHHH
Confidence 9999999999999999999999999999999999999997 65 5899999999999986 667777777
Q ss_pred HH---HHhcCCchHHHHHHH
Q 008028 533 NC---MALDLSWKEPARLWE 549 (580)
Q Consensus 533 ~~---~~~~fs~~~~a~~~~ 549 (580)
++ +.++|||+...++|.
T Consensus 387 ~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 387 KAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHcCHHHhHHHhc
Confidence 66 557999999888774
No 69
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.94 E-value=2.3e-26 Score=228.15 Aligned_cols=210 Identities=38% Similarity=0.615 Sum_probs=156.1
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccC-CcEEEE--------EEeCCeEEEEEEEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWD-TSVLAE--------VKVGDSIETVRFFH 156 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~ 156 (580)
||++|+.|+.|+.++||+|++++.|+++|+++||+|.||.|.|+....... .....+ +.+.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 799999999999999999999999999999999999999999976665542 112222 11211 15678888
Q ss_pred EEecCeeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecC
Q 008028 157 CYKRGVDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGND 236 (580)
Q Consensus 157 ~~~~gv~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~ 236 (580)
...+|+++|+++++.++.+ ..+|+.. +.++.++..||.+|+++++++++.++. +|| |||+||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~----------~pD-IIH~hD 141 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW----------KPD-IIHCHD 141 (245)
T ss_dssp EEETTEEEEEEESHHHHGS------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-----------S-S-EEEEEC
T ss_pred EEcCCccEEEecChhhccc------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC----------CCC-EEEecC
Confidence 8899999999999998875 4699876 788999999999999999999988754 499 899999
Q ss_pred CccchHHHHHHHhhhccCccccceE-EEcCCC-----CC-------------------CCCCccchHHHHHHhcCceeEe
Q 008028 237 WHTALLPCYLKFMYQSKGIHKNAKR-LCRPRY-----DK-------------------PVKGRKINWMKAGILESDRVLT 291 (580)
Q Consensus 237 ~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~-----~~-------------------~~~~~~~~~~~~~~~~ad~vi~ 291 (580)
||++++|.+++..++....+.+.++ +|+|.. .. ......+|+++.++..||.|+|
T Consensus 142 W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~T 221 (245)
T PF08323_consen 142 WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTT 221 (245)
T ss_dssp GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEE
T ss_pred chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeee
Confidence 9999999999998776677777888 888821 00 0113467899999999999999
Q ss_pred eCHHHHHHHHccccCCcchhhhhh
Q 008028 292 VSPHYAKELISGEEKGVELDNIIR 315 (580)
Q Consensus 292 vS~~~~~~l~~~~~~g~~~~~~~~ 315 (580)
||+.+++++.... .|..++.+++
T Consensus 222 VS~~Ya~Ei~~~~-~g~GL~~~l~ 244 (245)
T PF08323_consen 222 VSPTYAREIQTPE-FGEGLEGLLR 244 (245)
T ss_dssp SSHHHHHHTTSHH-HHTT-HHHHH
T ss_pred CCHHHHHHHhCcc-cCCChHHHhc
Confidence 9999999998732 3445555443
No 70
>PLN02275 transferase, transferring glycosyl groups
Probab=99.92 E-value=3.3e-23 Score=218.99 Aligned_cols=190 Identities=13% Similarity=0.070 Sum_probs=147.0
Q ss_pred HHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHH
Q 008028 278 WMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKE 357 (580)
Q Consensus 278 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 357 (580)
+++..++.+|.++++|+.+.+.+.+. .|+ ++.+|+||. .+.|.|.... .
T Consensus 158 ~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~-------------------~ 206 (371)
T PLN02275 158 YERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE-------------------I 206 (371)
T ss_pred HHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch-------------------h
Confidence 35667789999999999999998752 232 368999985 4556543210 0
Q ss_pred HHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhc-------------------CCCeEEEEEecCChhhHHHHH
Q 008028 358 ALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFM-------------------GGNVQIVVLGTGKKPMEQQIE 418 (580)
Q Consensus 358 ~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~-------------------~~~v~lii~G~g~~~~~~~i~ 418 (580)
.+. .+...+++++||+.++||++.+++|+..+. .++++|+|+|+|+ ..+.++
T Consensus 207 ------~~~-~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~--~~~~l~ 277 (371)
T PLN02275 207 ------RLR-PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP--QKAMYE 277 (371)
T ss_pred ------ccc-CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--CHHHHH
Confidence 011 112357889999999999999999998772 2679999999998 355666
Q ss_pred HHHHHCC-CCeeEecc-CChHHHHHHHhcCCEEEecC--C-CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEE
Q 008028 419 QLEIICP-EKARGITK-FSTPLAHKIIAGADFMLVPS--R-FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQM 493 (580)
Q Consensus 419 ~l~~~~~-~~v~~~~~-~~~~~~~~~~~~aDi~l~ps--~-~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~ 493 (580)
++..+.+ .++.+... .+.+....+|+.||++++|+ . .|++|++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 ~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv 357 (371)
T PLN02275 278 EKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLF 357 (371)
T ss_pred HHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEE
Confidence 6665543 24777664 46677888999999999863 2 488999999999999999999999999999999999997
Q ss_pred eecccccccCCcccHHHHHHHHHHHH
Q 008028 494 RSFHVECDRVDLADVAAIAKHVNRAV 519 (580)
Q Consensus 494 ~~~~~~~~~v~~~d~~~la~~l~~ll 519 (580)
+ |+++++++|.+++
T Consensus 358 ----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 358 ----------S--SSSELADQLLELL 371 (371)
T ss_pred ----------C--CHHHHHHHHHHhC
Confidence 5 6899999998764
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.92 E-value=2.1e-24 Score=233.45 Aligned_cols=288 Identities=17% Similarity=0.143 Sum_probs=200.6
Q ss_pred CceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCC-CCCCCCCccc---hHHHHHHhcCceeEeeCHHHHHHHHc
Q 008028 228 EDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPR-YDKPVKGRKI---NWMKAGILESDRVLTVSPHYAKELIS 302 (580)
Q Consensus 228 pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~-~~~~~~~~~~---~~~~~~~~~ad~vi~vS~~~~~~l~~ 302 (580)
++.+|+.||+|..++|.+++... ...++ +.+|- +......+.. ..+...+..+|.|.+.+..+.+.+.+
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~------~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~ 204 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG------PDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLS 204 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 43399999999999999987653 23455 55552 2221111111 23345666899999999888777665
Q ss_pred cccCCcchhh--------hhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 303 GEEKGVELDN--------IIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 303 ~~~~g~~~~~--------~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
.+..-..++. .-+..++.+||||||.+.|.+.... +..++.+++..+.+ ++.++|
T Consensus 205 ~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~---------------~~~~~~~~~~~~~~--~~~~~i 267 (460)
T cd03788 205 CCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS---------------PEVQERAAELRERL--GGRKLI 267 (460)
T ss_pred HHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcC---------------chhHHHHHHHHHhc--CCCEEE
Confidence 3221111110 0112378999999999888764321 11123333333433 356899
Q ss_pred EEEccCccccCHHHHHHHHhhhcC--C----CeEEEEEecCC-------hhhHHHHHHHHHH----CC----CCeeEec-
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMG--G----NVQIVVLGTGK-------KPMEQQIEQLEII----CP----EKARGIT- 432 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~--~----~v~lii~G~g~-------~~~~~~i~~l~~~----~~----~~v~~~~- 432 (580)
+++||+.+.||++.+++|++++.+ + +++|+++|.+. ..++++++++..+ ++ ..++++.
T Consensus 268 l~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g 347 (460)
T cd03788 268 VGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYR 347 (460)
T ss_pred EEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeC
Confidence 999999999999999999998864 3 37888887532 2456666665433 21 1244443
Q ss_pred cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCc----eEEcCCCCcceeEecCceeEEEeecccccccCCcccH
Q 008028 433 KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTV----PIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADV 508 (580)
Q Consensus 433 ~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~P----vI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~ 508 (580)
..+.+....+|+.||++++||..|++|++++|||+||+| +|+|+.+|..+. +.+|+++ +|.|+
T Consensus 348 ~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv----------~p~d~ 414 (460)
T cd03788 348 SLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLV----------NPYDI 414 (460)
T ss_pred CCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEE----------CCCCH
Confidence 346777888999999999999999999999999999999 999998888777 4679987 99999
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHH
Q 008028 509 AAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKML 552 (580)
Q Consensus 509 ~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 552 (580)
++++++|.+++++. .+++..+.+++ ..+.||+...++++++-+
T Consensus 415 ~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 415 DEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999999972 34555555544 336899999999987643
No 72
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.92 E-value=1.1e-23 Score=226.37 Aligned_cols=288 Identities=17% Similarity=0.141 Sum_probs=202.1
Q ss_pred CceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCC-CCCCCCccc---hHHHHHHhcCceeEeeCHHHHHHHHc
Q 008028 228 EDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRY-DKPVKGRKI---NWMKAGILESDRVLTVSPHYAKELIS 302 (580)
Q Consensus 228 pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~-~~~~~~~~~---~~~~~~~~~ad~vi~vS~~~~~~l~~ 302 (580)
+|.+|..||+|..++|.+++... ...++ |.+|-. .+....+.+ ..+-.++..||.|-+.++.+++.+.+
T Consensus 127 ~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~ 200 (456)
T TIGR02400 127 PGDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLS 200 (456)
T ss_pred CCCEEEEecchhhHHHHHHHhhC------CCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 44499999999999999998863 34566 666532 222222222 23455777999999999999998876
Q ss_pred cccC--Ccchhh-----hhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEE
Q 008028 303 GEEK--GVELDN-----IIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIG 375 (580)
Q Consensus 303 ~~~~--g~~~~~-----~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~ 375 (580)
.+.. |.+.+. .-+..+|.++|||||.+.|.+.... .........++++++ +.++|+
T Consensus 201 ~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~~vIl 263 (456)
T TIGR02400 201 AVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK------------PSVQKRIAELRESLK-----GRKLII 263 (456)
T ss_pred HHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC------------hhHHHHHHHHHHHcC-----CCeEEE
Confidence 4331 211100 0133479999999999988664321 000011223555542 557999
Q ss_pred EEccCccccCHHHHHHHHhhhcC--C----CeEEEEEec-----CC--hhhHHHHHHHHHH----CCC----CeeEec-c
Q 008028 376 FIGRLEEQKGSDILAQAIPKFMG--G----NVQIVVLGT-----GK--KPMEQQIEQLEII----CPE----KARGIT-K 433 (580)
Q Consensus 376 f~Grl~~~Kg~~~ll~a~~~l~~--~----~v~lii~G~-----g~--~~~~~~i~~l~~~----~~~----~v~~~~-~ 433 (580)
++||+++.||++.+++|++++.+ + ++.|+++|. ++ ..++++++++..+ ++. .++++. .
T Consensus 264 ~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~ 343 (456)
T TIGR02400 264 GVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRS 343 (456)
T ss_pred EccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCC
Confidence 99999999999999999999854 3 366887753 22 3455666666321 111 133333 3
Q ss_pred CChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCc----eEEcCCCCcceeEecCceeEEEeecccccccCCcccHH
Q 008028 434 FSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTV----PIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVA 509 (580)
Q Consensus 434 ~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~P----vI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~ 509 (580)
.+.+.+..+|+.||++++||..|++|++.+|||+||+| +|+|+.+|..+.+. +|+++ +|.|++
T Consensus 344 ~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllV----------nP~d~~ 410 (456)
T TIGR02400 344 YDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLV----------NPYDID 410 (456)
T ss_pred CCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEE----------CCCCHH
Confidence 46777888999999999999999999999999999999 99999988888773 68887 999999
Q ss_pred HHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHH
Q 008028 510 AIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKML 552 (580)
Q Consensus 510 ~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 552 (580)
++|++|.+++++. .+++.++.++. ....||+...++++++.+
T Consensus 411 ~lA~aI~~aL~~~-~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 411 GMADAIARALTMP-LEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHHHHcCC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999963 34444444433 235699999999988755
No 73
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.92 E-value=6.1e-24 Score=224.25 Aligned_cols=213 Identities=19% Similarity=0.205 Sum_probs=171.6
Q ss_pred HHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHH
Q 008028 281 AGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQ 360 (580)
Q Consensus 281 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 360 (580)
..+..+|.++++|+..++.+.+.. +. ..++.+||||++...+.+...
T Consensus 153 ~~~~~~d~ii~~s~~~~~~l~~~~--~~-------~~~v~~ip~g~~~~~~~~~~~------------------------ 199 (372)
T cd04949 153 ENLDKVDGVIVATEQQKQDLQKQF--GN-------YNPIYTIPVGSIDPLKLPAQF------------------------ 199 (372)
T ss_pred hChhhCCEEEEccHHHHHHHHHHh--CC-------CCceEEEcccccChhhcccch------------------------
Confidence 345689999999999999987622 11 115899999999876654310
Q ss_pred HHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHC--CCCeeEeccCCh
Q 008028 361 SQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIIC--PEKARGITKFST 436 (580)
Q Consensus 361 ~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~~~~~~ 436 (580)
.....+.|+|+||+.+.||++.+++++.++.+ ++++|+|+|.|.. ...+.++..+. ++++.+.+ +.
T Consensus 200 ------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~~v~~~g-~~- 269 (372)
T cd04949 200 ------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE--EEKLKELIEELGLEDYVFLKG-YT- 269 (372)
T ss_pred ------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch--HHHHHHHHHHcCCcceEEEcC-CC-
Confidence 01244689999999999999999999999865 7899999999873 34444444433 34566655 43
Q ss_pred HHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCC-CcceeEecCceeEEEeecccccccCCcccHHHHHHHH
Q 008028 437 PLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTG-GLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 437 ~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~g-g~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
+.+..+++.||++++||..|++|++++|||++|+|+|+++.+ |..+++.++.+|+++ ++.|+++++++|
T Consensus 270 ~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~~i 339 (372)
T cd04949 270 RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAEAI 339 (372)
T ss_pred CCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHHHH
Confidence 345679999999999999999999999999999999999987 899999999999998 999999999999
Q ss_pred HHHHHhcChhHHHHHHHHHH--HhcCCchHHHHHH
Q 008028 516 NRAVATYGTPALKEMIQNCM--ALDLSWKEPARLW 548 (580)
Q Consensus 516 ~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~ 548 (580)
.+++++ ++.+.+|.+++. .++|||+.++++|
T Consensus 340 ~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 340 IELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 999997 677888888774 4689999998876
No 74
>PRK14986 glycogen phosphorylase; Provisional
Probab=99.91 E-value=4e-23 Score=227.74 Aligned_cols=394 Identities=19% Similarity=0.190 Sum_probs=248.5
Q ss_pred CccccccHHHHhccchHHHHhCCCeEEEEEecCC--------------ccccccCC----------cEEEEEEeCCeEEE
Q 008028 96 PWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYD--------------QYKDAWDT----------SVLAEVKVGDSIET 151 (580)
Q Consensus 96 P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~--------------~~~~~~~~----------~~~~~~~~~~~~~~ 151 (580)
|-...||+|++++.+.++++++|.+.+.++.+|. ..++.|.. ...+++.++++.+.
T Consensus 119 a~LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F~Q~I~dG~Q~E~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~ 198 (815)
T PRK14986 119 PGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQ 198 (815)
T ss_pred CCCCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEEcCCCccCCCCceeEecCCcEEEEEeCCEEEe
Confidence 5556899999999999999999999999999986 12233321 23444555554433
Q ss_pred EEEEEEEecCeeEEEe--c--Cccchh------hhc-----------------------cC-----CCCcccCCCC-CCC
Q 008028 152 VRFFHCYKRGVDRVFV--D--HPVFLE------KVW-----------------------GK-----TGSKIYGPKA-GLD 192 (580)
Q Consensus 152 ~~~~~~~~~gv~~~~l--~--~~~~~~------~~~-----------------------~~-----~~~~~y~~~~-~~~ 192 (580)
.+....+.++-.+.-+ | .|.+-+ ++| .+ -...+|.... ..+
T Consensus 199 ~g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW~a~~~~~fd~~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~G 278 (815)
T PRK14986 199 EGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSG 278 (815)
T ss_pred cCceeEeeCCeeEEEEeCCccccCCCCCceEEEEEEEeecCcccCHhhcccccHHHHhhccchhhccccccCCCCCCccc
Confidence 2200111111011100 0 000000 000 00 0124555433 113
Q ss_pred CCchHHHHHHHHHHHHHHh-HHhccCCCCCCCCCCCCceEEEecCCccchHHHH-HHHhhhccCcccc-------ceE-E
Q 008028 193 YEDNQLRFSLLCQAALEAP-RILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY-LKFMYQSKGIHKN-------AKR-L 262 (580)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~-r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~-l~~~~~~~gi~~~-------~~~-~ 262 (580)
...|+.|..+|+.++++.+ |..... +.-+. .+...++||+||.|++++..+ ++.+....|+-.. ... |
T Consensus 279 k~lRLkQEyfl~~agv~di~r~~~~~-~~~l~-~l~~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~f 356 (815)
T PRK14986 279 RELRLRQEYFLVSATVQDILSRHYQL-HKTYD-NLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSY 356 (815)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHh-CCCHh-hCCcccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEe
Confidence 5668889999999998855 111000 00000 112345999999999998887 5655543232221 111 3
Q ss_pred E--------------------cCCCCC-------------------------------CCCCccchHHHHHHhcCceeEe
Q 008028 263 C--------------------RPRYDK-------------------------------PVKGRKINWMKAGILESDRVLT 291 (580)
Q Consensus 263 ~--------------------l~~~~~-------------------------------~~~~~~~~~~~~~~~~ad~vi~ 291 (580)
| +|++.. ...+..++|...++..|..|++
T Consensus 357 TnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNG 436 (815)
T PRK14986 357 TNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNG 436 (815)
T ss_pred ecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHHHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhH
Confidence 3 111100 0012368899999999999999
Q ss_pred eCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCC---CCccccccccCchh---------------------
Q 008028 292 VSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNP---STDRYINVNYDATT--------------------- 347 (580)
Q Consensus 292 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~---~~~~~l~~~~~~~~--------------------- 347 (580)
||+-..+-+.+..++.+. .+. ..++.-|+|||+..+|.. +.-..+..++.+++
T Consensus 437 VS~lH~evl~~~~f~df~--~l~-P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~ 513 (815)
T PRK14986 437 VSELHSNLMVQSLFADFA--KIF-PGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVN 513 (815)
T ss_pred HHHHHHHHHHHHHHHHHH--hhC-CCcccccCCCCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHH
Confidence 999666554332211111 111 126778999999999973 22223333333322
Q ss_pred --hhccchHHHHH----HHHHcCCCCCCCCcEEEEEccCccccCHHH-HHHHHhhhcC---------CCeEEEEEecCC-
Q 008028 348 --VMNAKPLVKEA----LQSQLGLPVDRNIPLIGFIGRLEEQKGSDI-LAQAIPKFMG---------GNVQIVVLGTGK- 410 (580)
Q Consensus 348 --~~~~~~~~~~~----~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~-ll~a~~~l~~---------~~v~lii~G~g~- 410 (580)
+...|..+|.. ++++.|+..+++..+++++.|+.++|+..+ ++..+.++.+ .|+++||+|+..
T Consensus 514 ~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP 593 (815)
T PRK14986 514 HAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS 593 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC
Confidence 33334444543 345678888999999999999999999999 8877665533 279999999953
Q ss_pred -----hhhHHHHHHHHH------HCCC--CeeEeccCChHHHHHHHhcCCEEEecCC--CCCccHHHHHHHHcCCceEEc
Q 008028 411 -----KPMEQQIEQLEI------ICPE--KARGITKFSTPLAHKIIAGADFMLVPSR--FEPCGLIQLHAMRYGTVPIVA 475 (580)
Q Consensus 411 -----~~~~~~i~~l~~------~~~~--~v~~~~~~~~~~~~~~~~~aDi~l~ps~--~E~~g~~~lEAma~G~PvI~s 475 (580)
+.+++.|.+++. ...+ +|+|+.+|+..++..++.+||++.+.|+ .|++|++.|.+|.+|.+.+.+
T Consensus 594 ~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgt 673 (815)
T PRK14986 594 AYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGT 673 (815)
T ss_pred CcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeec
Confidence 567778877776 4444 7999999999999999999999999998 699999999999999966666
Q ss_pred CCCCcceeEec--CceeEEEe
Q 008028 476 STGGLFDTVKE--GITGFQMR 494 (580)
Q Consensus 476 ~~gg~~e~i~~--~~~G~~~~ 494 (580)
-.|.+.|..++ ++|||.||
T Consensus 674 lDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 674 LDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred cCCchhHHHHhcCCCcEEEeC
Confidence 66555555544 89999999
No 75
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.91 E-value=3.5e-22 Score=209.94 Aligned_cols=341 Identities=14% Similarity=0.039 Sum_probs=218.4
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeE
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDR 164 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (580)
|||++++.+ .||....+.+|+++|.++||+|++++........ . ....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~-------------------~---~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR-------------------L---VPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh-------------------c---cccCCCcE
Confidence 899999876 5888888999999999999999999985311000 0 00125555
Q ss_pred EEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHH
Q 008028 165 VFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPC 244 (580)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~ 244 (580)
+.++.+..... ....+......+......+.+.++.. +|| |+|+|.+.+++.+.
T Consensus 54 ~~~~~~~~~~~----------------~~~~~l~~~~~~~~~~~~~~~~ik~~---------~pD-vv~~~~~~~~~~~~ 107 (357)
T PRK00726 54 HFIPSGGLRRK----------------GSLANLKAPFKLLKGVLQARKILKRF---------KPD-VVVGFGGYVSGPGG 107 (357)
T ss_pred EEEeccCcCCC----------------ChHHHHHHHHHHHHHHHHHHHHHHhc---------CCC-EEEECCCcchhHHH
Confidence 55543211100 00111122222223333333333221 599 89999887776666
Q ss_pred HHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEec
Q 008028 245 YLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIV 323 (580)
Q Consensus 245 ~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~ 323 (580)
.+.+..+ .++ ++.+.... -...++.++.+|.+++.++... .+ .+. .++.+|+
T Consensus 108 ~~~~~~~-------~p~v~~~~~~~~------~~~~r~~~~~~d~ii~~~~~~~---~~-----~~~------~~i~vi~ 160 (357)
T PRK00726 108 LAARLLG-------IPLVIHEQNAVP------GLANKLLARFAKKVATAFPGAF---PE-----FFK------PKAVVTG 160 (357)
T ss_pred HHHHHcC-------CCEEEEcCCCCc------cHHHHHHHHHhchheECchhhh---hc-----cCC------CCEEEEC
Confidence 5544332 233 32221110 1223556779999999988432 11 222 2899999
Q ss_pred CCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHH-HHHhhhcCCCeE
Q 008028 324 NGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILA-QAIPKFMGGNVQ 402 (580)
Q Consensus 324 NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll-~a~~~l~~~~v~ 402 (580)
||++.+.+.+... +++++++ ++.++|+++|+....|+...++ +|++++.+.+..
T Consensus 161 n~v~~~~~~~~~~-----------------------~~~~~~~--~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~ 215 (357)
T PRK00726 161 NPVREEILALAAP-----------------------PARLAGR--EGKPTLLVVGGSQGARVLNEAVPEALALLPEALQV 215 (357)
T ss_pred CCCChHhhcccch-----------------------hhhccCC--CCCeEEEEECCcHhHHHHHHHHHHHHHHhhhCcEE
Confidence 9999776543210 1234443 3557899999998888865555 999888654456
Q ss_pred EEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCc--
Q 008028 403 IVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL-- 480 (580)
Q Consensus 403 lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~-- 480 (580)
++++|.|.. +...+.+ . .+.++.+. .|. +....+++.||+++.++ -+++++|||++|+|+|++..++.
T Consensus 216 ~~~~G~g~~--~~~~~~~-~-~~~~v~~~-g~~-~~~~~~~~~~d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~ 285 (357)
T PRK00726 216 IHQTGKGDL--EEVRAAY-A-AGINAEVV-PFI-DDMAAAYAAADLVICRA----GASTVAELAAAGLPAILVPLPHAAD 285 (357)
T ss_pred EEEcCCCcH--HHHHHHh-h-cCCcEEEe-ehH-hhHHHHHHhCCEEEECC----CHHHHHHHHHhCCCEEEecCCCCCc
Confidence 778898872 3333333 2 44344443 343 34557999999999876 26889999999999999876532
Q ss_pred ------ceeEecCceeEEEeecccccccCCccc--HHHHHHHHHHHHHhcChhHHHHHHHHHH--HhcCCchHHHHHHHH
Q 008028 481 ------FDTVKEGITGFQMRSFHVECDRVDLAD--VAAIAKHVNRAVATYGTPALKEMIQNCM--ALDLSWKEPARLWEK 550 (580)
Q Consensus 481 ------~e~i~~~~~G~~~~~~~~~~~~v~~~d--~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~ 550 (580)
.+.+.+.++|+++ ++.| +++++++|.+++++ ++.+.+|.+++. .+.++.+++++.|++
T Consensus 286 ~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (357)
T PRK00726 286 DHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD--PERLEAMAEAARALGKPDAAERLADLIEE 353 (357)
T ss_pred CcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHhcCCcCHHHHHHHHHHH
Confidence 2456677889987 7776 99999999999997 777778887763 467888888888887
Q ss_pred HHH
Q 008028 551 MLL 553 (580)
Q Consensus 551 ~~~ 553 (580)
+..
T Consensus 354 ~~~ 356 (357)
T PRK00726 354 LAR 356 (357)
T ss_pred Hhh
Confidence 653
No 76
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.90 E-value=1e-22 Score=225.11 Aligned_cols=393 Identities=18% Similarity=0.178 Sum_probs=258.6
Q ss_pred CccccccHHHHhccchHHHHhCCCeEEEEEecCC--------------ccccccCC----------cEEEEEEeCCeEEE
Q 008028 96 PWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYD--------------QYKDAWDT----------SVLAEVKVGDSIET 151 (580)
Q Consensus 96 P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~--------------~~~~~~~~----------~~~~~~~~~~~~~~ 151 (580)
|-...||+|++++.+.++|+.+|.+.+.++.+|. ..++.|.. ...+++.++++.+.
T Consensus 102 a~LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F~Q~i~~G~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~ 181 (797)
T cd04300 102 AGLGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGNPWEIRRPDVAVPVRFGGRVEH 181 (797)
T ss_pred CCCCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEecCCCccCCCCCceEecCCcEEEEEECCEEEE
Confidence 5556899999999999999999999999999986 22333311 24455555554433
Q ss_pred EE-------EEE-----------EEecC------eeEEEec--Ccc-c--------------hhhhccC-CCCcccCCCC
Q 008028 152 VR-------FFH-----------CYKRG------VDRVFVD--HPV-F--------------LEKVWGK-TGSKIYGPKA 189 (580)
Q Consensus 152 ~~-------~~~-----------~~~~g------v~~~~l~--~~~-~--------------~~~~~~~-~~~~~y~~~~ 189 (580)
.. .|. ..+.| +.+.+.+ .+. + .++...+ --..+|++.+
T Consensus 182 ~~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~~~~~dl~~fn~gdy~~a~~~~~~~~~It~~LYp~Ds 261 (797)
T cd04300 182 YEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEFDLDAFNRGDYIRAVEEKNRAENISKVLYPNDS 261 (797)
T ss_pred eecCCcceeeecCcceEEeeecceeecCCCCCceEEEEEEEeeCCCCcCHHHhcCCchhhHHhhHHHhhhhhcccCCCCC
Confidence 22 111 11111 1111111 111 0 1222222 1137888632
Q ss_pred -CCCCCchHHHHHHHHHHHHHHh-HHhccCCCCCCCCCC-CCceEEEecCCccchHHHH-HHHhhhccCcccc-------
Q 008028 190 -GLDYEDNQLRFSLLCQAALEAP-RILNLNNNKYFSGPY-GEDVLFIGNDWHTALLPCY-LKFMYQSKGIHKN------- 258 (580)
Q Consensus 190 -~~~~~~~~~~~~~l~~~~~~~~-r~l~~~~~~~~~~~~-~pDvVih~~~~~~~~l~~~-l~~~~~~~gi~~~------- 258 (580)
......|+.|..+|+.++++.+ |.+......+ ..+ .+. +||+||.|++++..+ ++.+....|+-..
T Consensus 262 ~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~~~--~~l~~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~ 338 (797)
T cd04300 262 TEEGKELRLKQQYFFVSASLQDIIRRFKKTHGPL--SEFPDKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITT 338 (797)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCh--hhCCCce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 1125668899999999999875 6552211110 111 244 899999999998877 5555543232211
Q ss_pred ceE-EE--------------------cCCCC-------------------------------CCCCCccchHHHHHHhcC
Q 008028 259 AKR-LC--------------------RPRYD-------------------------------KPVKGRKINWMKAGILES 286 (580)
Q Consensus 259 ~~~-~~--------------------l~~~~-------------------------------~~~~~~~~~~~~~~~~~a 286 (580)
..+ || +|++. .......++|...++..|
T Consensus 339 ~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~v~Ma~LAi~~S 418 (797)
T cd04300 339 KTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKYPGDEDRIRRMSIIEEGGEKQVRMAHLAIVGS 418 (797)
T ss_pred hheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcccccCCCCEEehHHHHHhcC
Confidence 111 33 21111 011124689999999999
Q ss_pred ceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcC---CCCccccccccCc------------------
Q 008028 287 DRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWN---PSTDRYINVNYDA------------------ 345 (580)
Q Consensus 287 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~---~~~~~~l~~~~~~------------------ 345 (580)
..|++||+-..+-+++..+..+. ++. ..++..++|||+..+|. .+.-..+..++-+
T Consensus 419 ~~vNGVS~lH~ei~k~~~~~df~--~l~-P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~ 495 (797)
T cd04300 419 HSVNGVAALHSELLKETVFKDFY--ELY-PEKFNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFAD 495 (797)
T ss_pred cchhhhHHHHHHHHHHhhHHHHH--hhC-CCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCC
Confidence 99999999777666653222111 111 12788999999999997 3322333333322
Q ss_pred -----hhhhccchHHHHHH----HHHcCCCCCCCCcEEEEEccCccccCHHH-HHHHHhhhcC---------CCeEEEEE
Q 008028 346 -----TTVMNAKPLVKEAL----QSQLGLPVDRNIPLIGFIGRLEEQKGSDI-LAQAIPKFMG---------GNVQIVVL 406 (580)
Q Consensus 346 -----~~~~~~~~~~~~~~----~~~~glp~~~~~~~i~f~Grl~~~Kg~~~-ll~a~~~l~~---------~~v~lii~ 406 (580)
..+...|..+|..+ ++..|+..+++..+++++.|+.+||+..+ ++..+.++.+ .|+++||+
T Consensus 496 D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFa 575 (797)
T cd04300 496 DPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFG 575 (797)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEe
Confidence 22444555555544 55778888999999999999999999999 7777655433 26899999
Q ss_pred ecCC------hhhHHHHHHHHHH------CCC--CeeEeccCChHHHHHHHhcCCEEEecCC--CCCccHHHHHHHHcCC
Q 008028 407 GTGK------KPMEQQIEQLEII------CPE--KARGITKFSTPLAHKIIAGADFMLVPSR--FEPCGLIQLHAMRYGT 470 (580)
Q Consensus 407 G~g~------~~~~~~i~~l~~~------~~~--~v~~~~~~~~~~~~~~~~~aDi~l~ps~--~E~~g~~~lEAma~G~ 470 (580)
|+.. +.+++.|..++.. ..+ +|+|+.+|+..++..++.+||++.+.|+ .|++|++.|.+|.+|.
T Consensus 576 GKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGa 655 (797)
T cd04300 576 GKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGA 655 (797)
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCc
Confidence 9953 5677777777763 334 7999999999999999999999999998 6999999999999999
Q ss_pred ceEEcCCCCcceeEec--CceeEEEe
Q 008028 471 VPIVASTGGLFDTVKE--GITGFQMR 494 (580)
Q Consensus 471 PvI~s~~gg~~e~i~~--~~~G~~~~ 494 (580)
+.+.|-.|.+.|+.++ ++|+|+||
T Consensus 656 ltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 656 LTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred eeeecccchhHHHHHHhCcCcEEEeC
Confidence 7777777777776665 78999996
No 77
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=99.90 E-value=5e-23 Score=226.06 Aligned_cols=393 Identities=13% Similarity=0.143 Sum_probs=252.5
Q ss_pred CccccccHHHHhccchHHHHhCCCeEEEEEecCC--------------cccccc----------CCcEEEEEEeCCeEE-
Q 008028 96 PWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYD--------------QYKDAW----------DTSVLAEVKVGDSIE- 150 (580)
Q Consensus 96 P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~--------------~~~~~~----------~~~~~~~~~~~~~~~- 150 (580)
|-...||+|++++.+.++|+.+|.+.+.++.+|. ..+|.| .....+++.++++.+
T Consensus 108 a~LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~ 187 (798)
T PRK14985 108 PALGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTK 187 (798)
T ss_pred CCCCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCCcccCCCCceecCCCceEEEeeCCEEEe
Confidence 5556899999999999999999999999999986 113333 223455665555442
Q ss_pred -------------------------------EEEEEEEEecCeeEEEecCc--c----chhhhccC-CCCcccCCCC-CC
Q 008028 151 -------------------------------TVRFFHCYKRGVDRVFVDHP--V----FLEKVWGK-TGSKIYGPKA-GL 191 (580)
Q Consensus 151 -------------------------------~~~~~~~~~~gv~~~~l~~~--~----~~~~~~~~-~~~~~y~~~~-~~ 191 (580)
.+|+|....+. ++++.+.+ . ..++...+ -...+|++.. ..
T Consensus 188 ~~G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~~~-~~~l~~fn~gdy~~a~en~~~~e~It~~LYp~D~~~~ 266 (798)
T PRK14985 188 QDGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDNHTA 266 (798)
T ss_pred eCCcEEEECCEEEEEEeccccccCCCCCceEEEEEeEcCCCC-ccCHHHcCCcchhhccccchhhcchhceecCCCCCcc
Confidence 22222222111 22222211 1 12222223 1237887632 22
Q ss_pred CCCchHHHHHHHHHHHHH-HhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH-HHHhhhccCcccc-------ceE-
Q 008028 192 DYEDNQLRFSLLCQAALE-APRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY-LKFMYQSKGIHKN-------AKR- 261 (580)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~-~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~-l~~~~~~~gi~~~-------~~~- 261 (580)
....|..|..+|+.++++ ++|...... .-+.+=-.+. +||+||.|++++..+ ++.++...|+-.. ..+
T Consensus 267 Gk~lRLkQEyfl~sa~vqdilr~~~~~~-~~l~~l~~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~ 344 (798)
T PRK14985 267 GKKLRLMQQYFQCACSVADILRRHHLAG-RKLHELPDYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFA 344 (798)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcC-CChhhCCCCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhee
Confidence 246688999999999888 654332110 0011100345 899999999998877 6656543332221 111
Q ss_pred EEcC--------------------CC------------------CCC----------CCCccchHHHHHHhcCceeEeeC
Q 008028 262 LCRP--------------------RY------------------DKP----------VKGRKINWMKAGILESDRVLTVS 293 (580)
Q Consensus 262 ~~l~--------------------~~------------------~~~----------~~~~~~~~~~~~~~~ad~vi~vS 293 (580)
||-| ++ .+. .....++|...++..|..|++||
T Consensus 345 yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS 424 (798)
T PRK14985 345 YTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTRFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVA 424 (798)
T ss_pred eecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhH
Confidence 3311 00 000 11225788999999999999999
Q ss_pred HHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcC---CCCccccccccCc-------------------hh----
Q 008028 294 PHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWN---PSTDRYINVNYDA-------------------TT---- 347 (580)
Q Consensus 294 ~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~---~~~~~~l~~~~~~-------------------~~---- 347 (580)
+-..+-+.+..++++. ++. ..++..|+|||+..+|. .+.-..+..++.+ +.
T Consensus 425 ~lH~eil~~~~f~df~--~l~-p~kf~nvTNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~ 501 (798)
T PRK14985 425 ALHSDLVVKDLFPEYH--QLW-PNKFHNVTNGITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQ 501 (798)
T ss_pred HHHhchhHHhhhhhhH--hhC-CCccCCcCCCcCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHH
Confidence 9655544442222221 111 22788999999999996 2222223222222 22
Q ss_pred hhccchHHHHHH----HHHcCCCCCCCCcEEEEEccCccccCHHH-HHHHHhhhcC---------CCeEEEEEecCC---
Q 008028 348 VMNAKPLVKEAL----QSQLGLPVDRNIPLIGFIGRLEEQKGSDI-LAQAIPKFMG---------GNVQIVVLGTGK--- 410 (580)
Q Consensus 348 ~~~~~~~~~~~~----~~~~glp~~~~~~~i~f~Grl~~~Kg~~~-ll~a~~~l~~---------~~v~lii~G~g~--- 410 (580)
+...|..+|..+ +++.|+..+++..+++++.|+.+||+..+ ++..+.++.+ .|+++||+|+..
T Consensus 502 ~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y 581 (798)
T PRK14985 502 YREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY 581 (798)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc
Confidence 234444455443 46678888999999999999999999999 8777665533 268999999953
Q ss_pred ---hhhHHHHHHHHHHC------CC--CeeEeccCChHHHHHHHhcCCEEEecCC--CCCccHHHHHHHHcCCceEEcCC
Q 008028 411 ---KPMEQQIEQLEIIC------PE--KARGITKFSTPLAHKIIAGADFMLVPSR--FEPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 411 ---~~~~~~i~~l~~~~------~~--~v~~~~~~~~~~~~~~~~~aDi~l~ps~--~E~~g~~~lEAma~G~PvI~s~~ 477 (580)
+.+++.|..++... .+ +|+|+.+|+..++..++.+||++.+.|+ .|++|++.|.+|.+|.+.+.+-.
T Consensus 582 ~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlD 661 (798)
T PRK14985 582 YLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLD 661 (798)
T ss_pred HHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeeccc
Confidence 56777777777432 23 7999999999999999999999999998 69999999999999996666655
Q ss_pred CCcceeEec--CceeEEEe
Q 008028 478 GGLFDTVKE--GITGFQMR 494 (580)
Q Consensus 478 gg~~e~i~~--~~~G~~~~ 494 (580)
|.+.|..++ ++|||.||
T Consensus 662 GanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 662 GANVEIAEQVGEENIFIFG 680 (798)
T ss_pred chHHHHHHHhCcCcEEEeC
Confidence 555555443 78999996
No 78
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=99.90 E-value=6.8e-23 Score=225.43 Aligned_cols=393 Identities=18% Similarity=0.164 Sum_probs=256.4
Q ss_pred CccccccHHHHhccchHHHHhCCCeEEEEEecCC--------------ccccccCC----------cEEEEEEeCCeEEE
Q 008028 96 PWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYD--------------QYKDAWDT----------SVLAEVKVGDSIET 151 (580)
Q Consensus 96 P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~--------------~~~~~~~~----------~~~~~~~~~~~~~~ 151 (580)
|-...||+|++++.+.++|+.+|.+.+.++.+|. ..++.|.. ...+++.++++++.
T Consensus 99 a~LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~ 178 (794)
T TIGR02093 99 AGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRVEL 178 (794)
T ss_pred CCCCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEEECCEEEEcCCCcCCCCCCceeecCCcEEEEEeCCEEee
Confidence 5556899999999999999999999999999986 22233311 22555555553322
Q ss_pred E-----------EEE-------EEEecC------eeEEEecCcc-----------------chhhhccC-CCCcccCCCC
Q 008028 152 V-----------RFF-------HCYKRG------VDRVFVDHPV-----------------FLEKVWGK-TGSKIYGPKA 189 (580)
Q Consensus 152 ~-----------~~~-------~~~~~g------v~~~~l~~~~-----------------~~~~~~~~-~~~~~y~~~~ 189 (580)
. ..+ ...+.| +.+.+.+... ..++...+ --..+|++.+
T Consensus 179 ~~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LRLW~a~~~~~f~l~~fn~gdy~~a~~~~~~~e~It~vLYp~D~ 258 (794)
T TIGR02093 179 QPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEAPEEFDLDAFNAGDYYEAVEEKNRAENISRVLYPNDS 258 (794)
T ss_pred eccCCcceeEeeCceEEEEeecceeecCCCCCceEEEEEEEecCccccCHhhccCccHhhhhhChhhcCccccCCcCCCC
Confidence 1 000 111111 1111221111 11222233 1237888632
Q ss_pred -CCCCCchHHHHHHHHHHHHHHh-HHhccCCCCCCCCCC-CCceEEEecCCccchHHHH-HHHhhhccCccccc------
Q 008028 190 -GLDYEDNQLRFSLLCQAALEAP-RILNLNNNKYFSGPY-GEDVLFIGNDWHTALLPCY-LKFMYQSKGIHKNA------ 259 (580)
Q Consensus 190 -~~~~~~~~~~~~~l~~~~~~~~-r~l~~~~~~~~~~~~-~pDvVih~~~~~~~~l~~~-l~~~~~~~gi~~~~------ 259 (580)
......|+.|..+|+.++++.+ |.+..... =+. .+ .+. +||+||.|++++..+ ++.++...|+-...
T Consensus 259 ~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~~-~l~-~l~~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~ 335 (794)
T TIGR02093 259 TYEGKELRLKQQYFFVSASLQDIIRRHLETHP-DLS-DFPKKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITT 335 (794)
T ss_pred ccchHHHHHHHHHHhhhhHHHHHHHHHHHhCC-Chh-hCCcce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 1225668899999999998855 44411100 000 11 244 899999999998877 56555433322211
Q ss_pred -eE-EE--------------------cCCC------------------CCC-------------CCCccchHHHHHHhcC
Q 008028 260 -KR-LC--------------------RPRY------------------DKP-------------VKGRKINWMKAGILES 286 (580)
Q Consensus 260 -~~-~~--------------------l~~~------------------~~~-------------~~~~~~~~~~~~~~~a 286 (580)
.. || +|++ .+. ...+.++|...++..|
T Consensus 336 ~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S 415 (794)
T TIGR02093 336 KTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGS 415 (794)
T ss_pred hheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhh
Confidence 11 33 1110 000 1133689999999999
Q ss_pred ceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcC---CCCccccccccCc------------------
Q 008028 287 DRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWN---PSTDRYINVNYDA------------------ 345 (580)
Q Consensus 287 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~---~~~~~~l~~~~~~------------------ 345 (580)
..|++||+-..+-+++..++.+. +++ ..++..++|||+..+|. .+.-..+..++.+
T Consensus 416 ~~vNGVS~lH~eilk~~~~~df~--~l~-P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~ 492 (794)
T TIGR02093 416 HSVNGVAALHTELLKEDLLKDFY--ELY-PEKFNNKTNGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYAD 492 (794)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHH--hhC-CCccCCcCCCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCC
Confidence 99999999776666542111111 111 12778999999999997 3333334333333
Q ss_pred -----hhhhccchHHHHHH----HHHcCCCCCCCCcEEEEEccCccccCHHH-HHHHHhhhcC----C-----CeEEEEE
Q 008028 346 -----TTVMNAKPLVKEAL----QSQLGLPVDRNIPLIGFIGRLEEQKGSDI-LAQAIPKFMG----G-----NVQIVVL 406 (580)
Q Consensus 346 -----~~~~~~~~~~~~~~----~~~~glp~~~~~~~i~f~Grl~~~Kg~~~-ll~a~~~l~~----~-----~v~lii~ 406 (580)
..+...|..+|..+ ++..|+..+++..+++++.|+.+||+..+ ++..+.++.+ + |+++||+
T Consensus 493 D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFa 572 (794)
T TIGR02093 493 DSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFG 572 (794)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEE
Confidence 23344455555544 45778888999999999999999999999 7777665533 2 7899999
Q ss_pred ecCC------hhhHHHHHHHHHH------CCC--CeeEeccCChHHHHHHHhcCCEEEecCC--CCCccHHHHHHHHcCC
Q 008028 407 GTGK------KPMEQQIEQLEII------CPE--KARGITKFSTPLAHKIIAGADFMLVPSR--FEPCGLIQLHAMRYGT 470 (580)
Q Consensus 407 G~g~------~~~~~~i~~l~~~------~~~--~v~~~~~~~~~~~~~~~~~aDi~l~ps~--~E~~g~~~lEAma~G~ 470 (580)
|+.. +.+++.|..++.. ..+ +|+|+.+|+..++..++.+||++.+.|+ .|++|++.|.+|.+|.
T Consensus 573 GKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGa 652 (794)
T TIGR02093 573 GKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGA 652 (794)
T ss_pred ecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCc
Confidence 9953 5677777777743 334 7999999999999999999999999998 6999999999999999
Q ss_pred ceEEcCCCCcceeEec--CceeEEEe
Q 008028 471 VPIVASTGGLFDTVKE--GITGFQMR 494 (580)
Q Consensus 471 PvI~s~~gg~~e~i~~--~~~G~~~~ 494 (580)
+.+.|-.|.+.|+.++ ++|+|+||
T Consensus 653 ltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 653 LTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred ceeecccchhHHHHHHhCcccEEEcC
Confidence 7777777777776666 78999986
No 79
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.89 E-value=4.7e-21 Score=200.54 Aligned_cols=333 Identities=14% Similarity=0.055 Sum_probs=205.6
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
+|++.+.+ +||....+..++++|.++||+|++++........ . ....+++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~--------------------~--~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR--------------------L--VPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh--------------------c--ccccCCceE
Confidence 36666655 6888888999999999999999999986421110 0 001245555
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY 245 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~ 245 (580)
.+....+..+ ....+...+..+.+...++.+.+... +|| |+|+|.+..++.+..
T Consensus 53 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~i~~~---------~pD-vI~~~~~~~~~~~~~ 106 (350)
T cd03785 53 TIPVGGLRRK----------------GSLKKLKAPFKLLKGVLQARKILKKF---------KPD-VVVGFGGYVSGPVGL 106 (350)
T ss_pred EEEecCcCCC----------------ChHHHHHHHHHHHHHHHHHHHHHHhc---------CCC-EEEECCCCcchHHHH
Confidence 4433211110 00011111211222222333333221 699 778876665555444
Q ss_pred HHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecC
Q 008028 246 LKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVN 324 (580)
Q Consensus 246 l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~N 324 (580)
+.+..+. ++ +..+.... -.+.+...+.+|.++++|+...+.+ + ..++.+|+|
T Consensus 107 ~a~~~~~-------p~v~~~~~~~~------~~~~~~~~~~~~~vi~~s~~~~~~~--------~------~~~~~~i~n 159 (350)
T cd03785 107 AAKLLGI-------PLVIHEQNAVP------GLANRLLARFADRVALSFPETAKYF--------P------KDKAVVTGN 159 (350)
T ss_pred HHHHhCC-------CEEEEcCCCCc------cHHHHHHHHhhCEEEEcchhhhhcC--------C------CCcEEEECC
Confidence 4444322 22 21111110 1233445667999999999876651 1 128999999
Q ss_pred CCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHH-HHHHHHhhhcCCCeEE
Q 008028 325 GMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSD-ILAQAIPKFMGGNVQI 403 (580)
Q Consensus 325 Gvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~-~ll~a~~~l~~~~v~l 403 (580)
|+|.+.+.+.. . +++++++ ++.++|++.|+....|+.+ .+++++..+.++++++
T Consensus 160 ~v~~~~~~~~~---------------------~--~~~~~~~--~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~ 214 (350)
T cd03785 160 PVREEILALDR---------------------E--RARLGLR--PGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQV 214 (350)
T ss_pred CCchHHhhhhh---------------------h--HHhcCCC--CCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEE
Confidence 99976554321 1 5556665 3557888888877777765 4568888886566764
Q ss_pred -EEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC---
Q 008028 404 -VVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG--- 479 (580)
Q Consensus 404 -ii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg--- 479 (580)
+++|.|. .+.+++...++.+++.+.+.. .....+|+.||+++.++- +++++|||++|+|+|++..++
T Consensus 215 ~~i~G~g~---~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~ 285 (350)
T cd03785 215 IHQTGKGD---LEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISRAG----ASTVAELAALGLPAILIPLPYAAD 285 (350)
T ss_pred EEEcCCcc---HHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEECCC----HhHHHHHHHhCCCEEEeecCCCCC
Confidence 4677773 244444444444567665543 445579999999998662 688999999999999987654
Q ss_pred -----cceeEecCceeEEEeecccccccCCcc--cHHHHHHHHHHHHHhcChhHHHHHHHHHHH--hcCCchHHH
Q 008028 480 -----LFDTVKEGITGFQMRSFHVECDRVDLA--DVAAIAKHVNRAVATYGTPALKEMIQNCMA--LDLSWKEPA 545 (580)
Q Consensus 480 -----~~e~i~~~~~G~~~~~~~~~~~~v~~~--d~~~la~~l~~ll~~~~~~~~~~~~~~~~~--~~fs~~~~a 545 (580)
..+.+.+..+|+++ ++. |+++++++|.+++++ ++.+.+|++++.. +.+.-++++
T Consensus 286 ~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~ 348 (350)
T cd03785 286 DHQTANARALVKAGAAVLI----------PQEELTPERLAAALLELLSD--PERLKAMAEAARSLARPDAAERIA 348 (350)
T ss_pred CcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHhcCCCCHHHHHH
Confidence 23556667889987 665 899999999999986 6677777777632 344444443
No 80
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.89 E-value=3.6e-21 Score=201.22 Aligned_cols=321 Identities=15% Similarity=0.076 Sum_probs=196.2
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeE
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDR 164 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (580)
|||++++.+ .||.-.....|+++|.++||+|++++..+.. .. ... ...|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~-~~-------------------~~~--~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGL-EK-------------------RLV--PKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcc-hh-------------------ccc--ccCCCce
Confidence 789988876 3555556679999999999999999864310 00 000 0125555
Q ss_pred EEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHH
Q 008028 165 VFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPC 244 (580)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~ 244 (580)
+.++...+... ...........+.....++.+.+..+ +|| |+|+|.+...+.+.
T Consensus 53 ~~i~~~~~~~~----------------~~~~~l~~~~~~~~~~~~l~~~i~~~---------~pD-vVi~~~~~~~~~~~ 106 (348)
T TIGR01133 53 YFIPVGGLRRK----------------GSFRLIKTPLKLLKAVFQARRILKKF---------KPD-AVIGFGGYVSGPAG 106 (348)
T ss_pred EEEeccCcCCC----------------ChHHHHHHHHHHHHHHHHHHHHHHhc---------CCC-EEEEcCCcccHHHH
Confidence 55543221100 01111211111222233333333322 699 78888666655555
Q ss_pred HHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEec
Q 008028 245 YLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIV 323 (580)
Q Consensus 245 ~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~ 323 (580)
.++...+. ++ +..+... . -...++..+.+|.++++|+...+.+ +..+|+
T Consensus 107 ~~~~~~~~-------p~v~~~~~~~----~--~~~~~~~~~~~d~ii~~~~~~~~~~-----------------~~~~i~ 156 (348)
T TIGR01133 107 LAAKLLGI-------PLFHHEQNAV----P--GLTNKLLSRFAKKVLISFPGAKDHF-----------------EAVLVG 156 (348)
T ss_pred HHHHHcCC-------CEEEECCCCC----c--cHHHHHHHHHhCeeEECchhHhhcC-----------------CceEEc
Confidence 44444321 22 2111111 1 1123566778999999999876654 237899
Q ss_pred CCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHH-HHHHHhhhcCCCeE
Q 008028 324 NGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDI-LAQAIPKFMGGNVQ 402 (580)
Q Consensus 324 NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~-ll~a~~~l~~~~v~ 402 (580)
||++...+.+... +++++++ ++.++|+++|+....|+... ++++++++.+.+++
T Consensus 157 n~v~~~~~~~~~~-----------------------~~~~~~~--~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~ 211 (348)
T TIGR01133 157 NPVRQEIRSLPVP-----------------------RERFGLR--EGKPTILVLGGSQGAKILNELVPKALAKLAEKGIQ 211 (348)
T ss_pred CCcCHHHhcccch-----------------------hhhcCCC--CCCeEEEEECCchhHHHHHHHHHHHHHHHhhcCcE
Confidence 9998765543210 1245665 35578999998888888654 55888888665677
Q ss_pred EEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCc--
Q 008028 403 IVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL-- 480 (580)
Q Consensus 403 lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~-- 480 (580)
+++++.+.. . +.+++...+.+. .....|.......+|+.||+++.++ + |++++|||++|+|+|++..++.
T Consensus 212 ~~~~~g~~~-~-~~l~~~~~~~~l--~~~v~~~~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~ 283 (348)
T TIGR01133 212 IVHQTGKND-L-EKVKNVYQELGI--EAIVTFIDENMAAAYAAADLVISRA---G-ASTVAELAAAGVPAILIPYPYAAD 283 (348)
T ss_pred EEEECCcch-H-HHHHHHHhhCCc--eEEecCcccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCcc
Confidence 654443332 2 455555544431 1222222224567999999999865 2 6899999999999999886542
Q ss_pred -----ceeEecCceeEEEeecccccccCCccc--HHHHHHHHHHHHHhcChhHHHHHHHHH
Q 008028 481 -----FDTVKEGITGFQMRSFHVECDRVDLAD--VAAIAKHVNRAVATYGTPALKEMIQNC 534 (580)
Q Consensus 481 -----~e~i~~~~~G~~~~~~~~~~~~v~~~d--~~~la~~l~~ll~~~~~~~~~~~~~~~ 534 (580)
.+.+.++.+|+++ ++.| +++++++|.+++++ ++.+.+|++++
T Consensus 284 ~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~ 332 (348)
T TIGR01133 284 DQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD--PANLEAMAEAA 332 (348)
T ss_pred chhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC--HHHHHHHHHHH
Confidence 2467788899987 7765 99999999999986 67777787766
No 81
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.88 E-value=2.4e-21 Score=220.61 Aligned_cols=295 Identities=16% Similarity=0.159 Sum_probs=204.4
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCC-CCCCCCccc---hHHHHHHhcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRY-DKPVKGRKI---NWMKAGILESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~-~~~~~~~~~---~~~~~~~~~ad~vi~vS~~~~~~l~ 301 (580)
+||.+|..||+|..++|.+++... ...++ |.+|-- .+....+.+ ..+-.++..||.|-+.+..+++.+.
T Consensus 146 ~~~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl 219 (797)
T PLN03063 146 EEGDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFL 219 (797)
T ss_pred CCCCEEEEecchhhhHHHHHHHhC------CCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHH
Confidence 344489999999999999998863 35566 666632 222222222 2334577799999999999999888
Q ss_pred ccccC--Ccch--hhhh---hcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 302 SGEEK--GVEL--DNII---RKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 302 ~~~~~--g~~~--~~~~---~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
+.+.. |.+. ..+. +..+|.++|||||.+.|.+.... .........+++.++ +.++|
T Consensus 220 ~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~~lI 282 (797)
T PLN03063 220 SACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL------------PEVKQHMKELKRFFA-----GRKVI 282 (797)
T ss_pred HHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC------------hhHHHHHHHHHHhcC-----CCeEE
Confidence 63321 1111 0111 12478999999999888654211 000001123344433 45799
Q ss_pred EEEccCccccCHHHHHHHHhhhcC--CC----eEEEEEec-----CC--hhhHHHHHHHHHHCCCC--------eeEec-
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMG--GN----VQIVVLGT-----GK--KPMEQQIEQLEIICPEK--------ARGIT- 432 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~--~~----v~lii~G~-----g~--~~~~~~i~~l~~~~~~~--------v~~~~- 432 (580)
+++||+++.||++.+++|++++.+ ++ +.|+.++. ++ ..+++++.++......+ ++++.
T Consensus 283 l~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~ 362 (797)
T PLN03063 283 LGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDC 362 (797)
T ss_pred EEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecC
Confidence 999999999999999999999854 33 45554442 22 24666676664221111 22222
Q ss_pred cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCc----eEEcCCCCcceeEecCceeEEEeecccccccCCcccH
Q 008028 433 KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTV----PIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADV 508 (580)
Q Consensus 433 ~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~P----vI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~ 508 (580)
..+......+|+.||++++||..|++|++.+|||+||+| +|+|..+|..+.+ +.+|+++ +|.|+
T Consensus 363 ~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allV----------nP~D~ 430 (797)
T PLN03063 363 SVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLV----------NPWNI 430 (797)
T ss_pred CCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEE----------CCCCH
Confidence 345677778999999999999999999999999999999 9999999988876 4468887 99999
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHHHHHHh
Q 008028 509 AAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKMLLSMEV 557 (580)
Q Consensus 509 ~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~ 557 (580)
+++|++|.++|++. ++++.++.+.. ....++|...++.+++.|.+...
T Consensus 431 ~~lA~AI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 431 TEVSSAIKEALNMS-DEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred HHHHHHHHHHHhCC-HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 99999999999962 44444444433 44689999999999998887764
No 82
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.87 E-value=8.3e-20 Score=193.69 Aligned_cols=223 Identities=14% Similarity=0.115 Sum_probs=160.3
Q ss_pred HHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHH
Q 008028 281 AGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQ 360 (580)
Q Consensus 281 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 360 (580)
+.++.+|.++++|+...+.+.+ .|++.+ ++.++.|.++.. |.+... +..++
T Consensus 143 ~~~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~ 193 (380)
T PRK13609 143 WVHREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIY 193 (380)
T ss_pred cccCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHH
Confidence 3467999999999999999986 677655 677765555432 222111 34467
Q ss_pred HHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHH
Q 008028 361 SQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAH 440 (580)
Q Consensus 361 ~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~ 440 (580)
++++++.+ ...++++.|++...|+++.+++++.+. ++++++++|+++..+.+.++++..+.++++.+.+.. .+ ..
T Consensus 194 ~~~~l~~~-~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~-~~-~~ 268 (380)
T PRK13609 194 NKYQLCPN-KKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV-EN-ID 268 (380)
T ss_pred HHcCCCCC-CcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech-hh-HH
Confidence 88888632 223556678898899999999988653 679998876544446677777766666567777543 33 45
Q ss_pred HHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC-CCCcc----eeEecCceeEEEeecccccccCCcccHHHHHHHH
Q 008028 441 KIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLF----DTVKEGITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 441 ~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~-~gg~~----e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
.+++.||+++. ++.|++++|||++|+|+|+++ .+|.. +.+. .+|+.+ ...|+++++++|
T Consensus 269 ~l~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~----------~~~~~~~l~~~i 332 (380)
T PRK13609 269 ELFRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAV----------VIRDDEEVFAKT 332 (380)
T ss_pred HHHHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEE----------EECCHHHHHHHH
Confidence 69999999874 467999999999999999986 55532 1222 245544 557899999999
Q ss_pred HHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHHHHH
Q 008028 516 NRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKMLLSM 555 (580)
Q Consensus 516 ~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l 555 (580)
.+++++ ++.+.+|.+++ +...++++++++.+++.+...
T Consensus 333 ~~ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 333 EALLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHHHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 999987 67777887776 345689999999998877543
No 83
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.86 E-value=8e-21 Score=216.54 Aligned_cols=293 Identities=17% Similarity=0.165 Sum_probs=199.9
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCCC-CCCCccc---hHHHHHHhcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDK-PVKGRKI---NWMKAGILESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~-~~~~~~~---~~~~~~~~~ad~vi~vS~~~~~~l~ 301 (580)
++|.+|..||+|..++|.+++... ...++ |.+|-..+ ....+.+ ..+-.++..+|.|-+.+..+.+.+.
T Consensus 132 ~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl 205 (726)
T PRK14501 132 RPGDVVWVHDYQLMLLPAMLRERL------PDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFL 205 (726)
T ss_pred CCCCEEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHH
Confidence 344499999999999999998763 34566 66663222 2111222 2345577799999999999888877
Q ss_pred ccccC--Ccchh--hh-h--hcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 302 SGEEK--GVELD--NI-I--RKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 302 ~~~~~--g~~~~--~~-~--~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
+.+.. |.+.. .+ + +..++.++|||||.+.|.+.... .......+.+++.+ ++.++|
T Consensus 206 ~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~------------~~~~~~~~~lr~~~-----~~~~~i 268 (726)
T PRK14501 206 SSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD------------PEVQEEIRRLRQDL-----RGRKII 268 (726)
T ss_pred HHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC------------chHHHHHHHHHHHc-----CCCEEE
Confidence 53322 11100 00 0 12368999999999988764321 00001122344442 255799
Q ss_pred EEEccCccccCHHHHHHHHhhhcC--C----CeEEEEEecCC-------hhhHHHHHHHHHH----CCC----Cee-Eec
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMG--G----NVQIVVLGTGK-------KPMEQQIEQLEII----CPE----KAR-GIT 432 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~--~----~v~lii~G~g~-------~~~~~~i~~l~~~----~~~----~v~-~~~ 432 (580)
+++||+++.||+..+++|++++.+ + +++|+++|.+. .++++++.++..+ ++. .++ +..
T Consensus 269 l~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~ 348 (726)
T PRK14501 269 LSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYR 348 (726)
T ss_pred EEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeC
Confidence 999999999999999999999854 3 47898887431 2455666665432 111 133 334
Q ss_pred cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCC-----ceEEcCCCCcceeEecCceeEEEeecccccccCCccc
Q 008028 433 KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLAD 507 (580)
Q Consensus 433 ~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~-----PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d 507 (580)
.++......+|+.||++++||..|++|++.+|||+||+ ||++...|+..++. .|+++ +|.|
T Consensus 349 ~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv----------~P~d 414 (726)
T PRK14501 349 SLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLV----------NPND 414 (726)
T ss_pred CCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEE----------CCCC
Confidence 55677788899999999999999999999999999955 55555567766653 47887 9999
Q ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHHHHHHh
Q 008028 508 VAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKMLLSMEV 557 (580)
Q Consensus 508 ~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~ 557 (580)
++++|++|.+++.+. .+++.+..+++ ....|||..+++++++.|.++..
T Consensus 415 ~~~la~ai~~~l~~~-~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 415 IEGIAAAIKRALEMP-EEEQRERMQAMQERLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred HHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 999999999999963 22333322222 23689999999999999998754
No 84
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.85 E-value=1.9e-19 Score=190.98 Aligned_cols=263 Identities=14% Similarity=0.079 Sum_probs=176.2
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHcccc
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEE 305 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~ 305 (580)
+||+|+..|.|........+....+. + ....++ .++.++... .. .+..+.+|.++++|+..++.+.+
T Consensus 100 ~pDvIi~thp~~~~~~~~~l~~~~~~-~-~~~~p~~~~~tD~~~~----~~---~w~~~~~d~~~~~s~~~~~~l~~--- 167 (382)
T PLN02605 100 KPDIIVSVHPLMQHVPLRVLRWQGKE-L-GKKIPFTTVVTDLGTC----HP---TWFHKGVTRCFCPSEEVAKRALK--- 167 (382)
T ss_pred CcCEEEEeCcCcccCHHHHHHHHhhc-c-CCCCCEEEEECCCCCc----Cc---ccccCCCCEEEECCHHHHHHHHH---
Confidence 69966666777655433334333211 1 112233 222222111 11 23357999999999999999986
Q ss_pred CCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccC
Q 008028 306 KGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKG 385 (580)
Q Consensus 306 ~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg 385 (580)
+|++.+ ++.++.++++...+.+... +..+++++|++ ++.++|+++|+....|+
T Consensus 168 ~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~~gl~--~~~~~il~~Gg~~g~~~ 220 (382)
T PLN02605 168 RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRELGMD--EDLPAVLLMGGGEGMGP 220 (382)
T ss_pred cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHHcCCC--CCCcEEEEECCCccccc
Confidence 677766 8888988888654433221 56788999996 45689999999999999
Q ss_pred HHHHHHHHhhhc------CCCeE-EEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCc
Q 008028 386 SDILAQAIPKFM------GGNVQ-IVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPC 458 (580)
Q Consensus 386 ~~~ll~a~~~l~------~~~v~-lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~ 458 (580)
+..+++++..+. .++++ ++++|++. .+.+.+++... ..++.+.+..+ .+..+|+.||++|.++ .
T Consensus 221 ~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~~--~~~~l~~aaDv~V~~~----g 291 (382)
T PLN02605 221 LEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFVT--NMEEWMGACDCIITKA----G 291 (382)
T ss_pred HHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEeccc--cHHHHHHhCCEEEECC----C
Confidence 999999997653 35676 56667653 35555655422 23466555443 4667999999999755 4
Q ss_pred cHHHHHHHHcCCceEEcCC------CCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHH
Q 008028 459 GLIQLHAMRYGTVPIVAST------GGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQ 532 (580)
Q Consensus 459 g~~~lEAma~G~PvI~s~~------gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~ 532 (580)
|++++|||+||+|+|+++. |+. +.+.+++.|+. ..|+++++++|.+++++ +++.+.+|++
T Consensus 292 ~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~~la~~i~~ll~~-~~~~~~~m~~ 357 (382)
T PLN02605 292 PGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPKEIARIVAEWFGD-KSDELEAMSE 357 (382)
T ss_pred cchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHHHHHHHHHHHHcC-CHHHHHHHHH
Confidence 8899999999999999984 333 33445556664 37999999999999985 2556677777
Q ss_pred HHHH--hcCCchHHHHHHHHH
Q 008028 533 NCMA--LDLSWKEPARLWEKM 551 (580)
Q Consensus 533 ~~~~--~~fs~~~~a~~~~~~ 551 (580)
++.+ ...+.+.+++.+.+.
T Consensus 358 ~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 358 NALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHhcCCchHHHHHHHHHHH
Confidence 6633 356666666665544
No 85
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.85 E-value=1.9e-20 Score=175.51 Aligned_cols=164 Identities=26% Similarity=0.447 Sum_probs=138.1
Q ss_pred HHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhc---CCCeEEEEEecCChhhHHHHHHHHHHC--CCCeeE
Q 008028 356 KEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFM---GGNVQIVVLGTGKKPMEQQIEQLEIIC--PEKARG 430 (580)
Q Consensus 356 ~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~---~~~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~ 430 (580)
++.++...+.+ .+.++|+|+||+.+.||++.+++++..+. .++++++|+|++. ....+..+.... ..++.+
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 56677777775 45689999999999999999999999986 4799999999766 344455555543 346888
Q ss_pred eccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHH
Q 008028 431 ITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAA 510 (580)
Q Consensus 431 ~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~ 510 (580)
.+......+..+++.||++++||..|++|++++|||++|+|+|+++.|+..+++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 887777788889999999999999999999999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHHH
Q 008028 511 IAKHVNRAVATYGTPALKEMIQNCM 535 (580)
Q Consensus 511 la~~l~~ll~~~~~~~~~~~~~~~~ 535 (580)
++++|.+++++ ++.+..|++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999998 677778877764
No 86
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.85 E-value=5.2e-19 Score=187.14 Aligned_cols=222 Identities=15% Similarity=0.127 Sum_probs=160.9
Q ss_pred hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHH
Q 008028 277 NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVK 356 (580)
Q Consensus 277 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 356 (580)
.+++..++.||.|+++|+.+.+.+.+ .+ . ++.+|+||+|.+.|.+...... .
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~---~------~i~~i~ngvd~~~f~~~~~~~~----------------~ 196 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN---P------NVVLVPNGVDYEHFAAARDPPP----------------P 196 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC---C------CEEEcccccCHHHhhcccccCC----------------C
Confidence 56788999999999999999988875 23 1 8999999999988876532100 0
Q ss_pred HHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCCh
Q 008028 357 EALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFST 436 (580)
Q Consensus 357 ~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~ 436 (580)
.+... ..+.++|+|+|++.+.++++++.++.+. .++++|+|+|.+.... ....+. ...+|.+++..+.
T Consensus 197 --~~~~~----~~~~~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vliG~~~~~~--~~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 197 --PADLA----ALPRPVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLIGPVDVSI--DPSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred --hhHHh----cCCCCEEEEEeccccccCHHHHHHHHHH--CCCCEEEEECCCcCcc--ChhHhc--cCCCEEEeCCCCH
Confidence 01111 1355799999999998888777666553 3789999999983111 111111 1256888888888
Q ss_pred HHHHHHHhcCCEEEecCCC-----CCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHH
Q 008028 437 PLAHKIIAGADFMLVPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAI 511 (580)
Q Consensus 437 ~~~~~~~~~aDi~l~ps~~-----E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~l 511 (580)
+.+..+++++|++++|+.. +.+|++++|||+||+|||+|+.+.+.+. ...+++ .+.|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~~---~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRRY---EDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHhh---cCcEEE-----------eCCCHHHH
Confidence 8888999999999999863 4689999999999999999987655443 333443 56799999
Q ss_pred HHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 008028 512 AKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 512 a~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~ 554 (580)
+++|.+++........ ...++ +.+.+||+..++++++.+.+
T Consensus 331 ~~ai~~~l~~~~~~~~-~~~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARE-RRRLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHH-HHHHH-HHHHCCHHHHHHHHHHHHHh
Confidence 9999998775322222 22222 67889999999999966543
No 87
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=99.84 E-value=5.4e-20 Score=200.59 Aligned_cols=392 Identities=18% Similarity=0.217 Sum_probs=218.3
Q ss_pred cccccHHHHhccchHHHHhCCCeEEEEEecCC--------------cccc-------ccCC---cEEEEEEeCCeEE---
Q 008028 98 SKTGGLGDVLGGLPPALAARGHRVMSVAPRYD--------------QYKD-------AWDT---SVLAEVKVGDSIE--- 150 (580)
Q Consensus 98 ~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~--------------~~~~-------~~~~---~~~~~~~~~~~~~--- 150 (580)
..-||+|+++.-+..+|+.+|.+.+..+.+|. ..+| .|+. ...+++.++++++
T Consensus 21 LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe~~r~~~~~~V~f~G~v~~~~ 100 (713)
T PF00343_consen 21 LGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWEIRRPDESYEVKFGGRVEDDG 100 (713)
T ss_dssp ESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTSEEEGGGEEEEEESEEEE-EE
T ss_pred ccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceEEecCCceEEEeccceEEecC
Confidence 34699999999999999999999999999986 1222 2332 2345555554332
Q ss_pred ------------EEEEEEEEecC-----eeEEEe---cC-----------ccchhhhccC-----CCCcccCCCC-CCCC
Q 008028 151 ------------TVRFFHCYKRG-----VDRVFV---DH-----------PVFLEKVWGK-----TGSKIYGPKA-GLDY 193 (580)
Q Consensus 151 ------------~~~~~~~~~~g-----v~~~~l---~~-----------~~~~~~~~~~-----~~~~~y~~~~-~~~~ 193 (580)
..-.+...+.| +...++ .. ..+...+..+ -..-+|...+ ....
T Consensus 101 ~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~~~~~fd~~~fn~gdy~~a~~~~~~~e~is~vLYP~d~~~~Gk 180 (713)
T PF00343_consen 101 GRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAEPSEEFDLESFNRGDYIKAVEEKNRAENISKVLYPNDSTEEGK 180 (713)
T ss_dssp TTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEEESSSTTHHHHHTTCHHHHHHHHHHHHGGGTBSS-SSSSHHHH
T ss_pred CCcccccCCeEEEEEecCceeecCCCCceEEEEEeccCCCcccChhhcCCCcHHHHHHHHHHhhceeeecCCCCccccch
Confidence 00111112111 111111 11 1111111111 0125665322 0011
Q ss_pred CchHHHHHHHHHHHHHH-hHHhccCCCCCCCCCCCCceEEEecCCccchHHHH-HHHhhhccCccccce-------E-EE
Q 008028 194 EDNQLRFSLLCQAALEA-PRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCY-LKFMYQSKGIHKNAK-------R-LC 263 (580)
Q Consensus 194 ~~~~~~~~~l~~~~~~~-~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~-l~~~~~~~gi~~~~~-------~-~~ 263 (580)
..|..|..+|+.+.++- +|........+ + .+.--++||+||.|++++..+ ++.++...|+-...+ . ||
T Consensus 181 ~LRLkQqyf~vsa~lqdiir~~~~~~~~~-~-~~~~~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fT 258 (713)
T PF00343_consen 181 ELRLKQQYFFVSASLQDIIRRFKKSHGDL-R-EFPDKVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFT 258 (713)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCG-G-GHHHHEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEE
T ss_pred hhhhhhHhhhhhhHHHHHHHHHHHhCCCh-H-HCCcceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeee
Confidence 33677777777777654 34432210000 0 001134899999999998887 677776555543221 1 44
Q ss_pred cC--------------------C-------------------------------CCCCCCCccchHHHHHHhcCceeEee
Q 008028 264 RP--------------------R-------------------------------YDKPVKGRKINWMKAGILESDRVLTV 292 (580)
Q Consensus 264 l~--------------------~-------------------------------~~~~~~~~~~~~~~~~~~~ad~vi~v 292 (580)
-| . .........++|...++..|..+++|
T Consensus 259 nHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vNGV 338 (713)
T PF00343_consen 259 NHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVNGV 338 (713)
T ss_dssp E--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEEES
T ss_pred ccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhcccccch
Confidence 11 0 00112235789999999999999999
Q ss_pred CHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCcc---ccccccCchhhh--------------------
Q 008028 293 SPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDR---YINVNYDATTVM-------------------- 349 (580)
Q Consensus 293 S~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~---~l~~~~~~~~~~-------------------- 349 (580)
|+-..+-+++...+.+. ++. ..++..|+|||+..+|.....+ .+..++.++.|.
T Consensus 339 S~LH~ev~k~~~f~~f~--~l~-P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~ 415 (713)
T PF00343_consen 339 SKLHGEVLKQMVFKDFY--ELW-PEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQE 415 (713)
T ss_dssp SHHHHHHHHHTTTHHHH--HHS-GGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHH
T ss_pred HHHHHHHHHHHHhhhhh--hcC-CceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHH
Confidence 99776666543322221 111 2379999999999999754222 233333332222
Q ss_pred ---ccchHHHH----HHHHHcCCCCCCCCcEEEEEccCccccCHHH-HH---HHHhhhcC------CCeEEEEEecCC--
Q 008028 350 ---NAKPLVKE----ALQSQLGLPVDRNIPLIGFIGRLEEQKGSDI-LA---QAIPKFMG------GNVQIVVLGTGK-- 410 (580)
Q Consensus 350 ---~~~~~~~~----~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~-ll---~a~~~l~~------~~v~lii~G~g~-- 410 (580)
..|..+|. .+++..++..+++..+++++.|+.+||+..+ ++ ..+.++++ .|+++||+|+..
T Consensus 416 ~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~ 495 (713)
T PF00343_consen 416 ELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPG 495 (713)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCC
Confidence 12222232 3345677777889999999999999999998 34 34444443 489999999953
Q ss_pred ----hhhHHHHHHHHH------HCCC--CeeEeccCChHHHHHHHhcCCEEEecCC--CCCccHHHHHHHHcCCceEEcC
Q 008028 411 ----KPMEQQIEQLEI------ICPE--KARGITKFSTPLAHKIIAGADFMLVPSR--FEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 411 ----~~~~~~i~~l~~------~~~~--~v~~~~~~~~~~~~~~~~~aDi~l~ps~--~E~~g~~~lEAma~G~PvI~s~ 476 (580)
+.+++.|.+++. ...+ +|+|+.+|+..++..++.+||+|++.|+ +|++|++.|++|.+|.+.+++-
T Consensus 496 d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstl 575 (713)
T PF00343_consen 496 DYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTL 575 (713)
T ss_dssp -HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEES
T ss_pred cHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecc
Confidence 467777777664 2233 7999999999999999999999999998 6999999999999999555555
Q ss_pred CCCcceeEec--CceeEEEe
Q 008028 477 TGGLFDTVKE--GITGFQMR 494 (580)
Q Consensus 477 ~gg~~e~i~~--~~~G~~~~ 494 (580)
.|.+.|+..+ .++.|+||
T Consensus 576 DG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 576 DGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp STCHHHHHHHH-GGGSEEES
T ss_pred cchhHHHHHhcCCCcEEEcC
Confidence 5555554432 46889987
No 88
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.83 E-value=6.8e-19 Score=188.52 Aligned_cols=289 Identities=14% Similarity=0.102 Sum_probs=203.6
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCC-CCCCCCCccch---HHHHHHhcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPR-YDKPVKGRKIN---WMKAGILESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~-~~~~~~~~~~~---~~~~~~~~ad~vi~vS~~~~~~l~ 301 (580)
++|.+|..||+|..++|.+++... .+.++ |.+|- +.+....+.+. .+-.++..||.|-+.+..+++.+.
T Consensus 131 ~~~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl 204 (487)
T TIGR02398 131 AEGATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFV 204 (487)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHH
Confidence 354499999999999999998763 34566 66663 22222222222 334566799999999999999887
Q ss_pred ccccC--Ccchhh-----------------------h---hhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccch
Q 008028 302 SGEEK--GVELDN-----------------------I---IRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKP 353 (580)
Q Consensus 302 ~~~~~--g~~~~~-----------------------~---~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~ 353 (580)
+.+.. |.+... + =+..+|.++|+|||.+.|.+.... ....
T Consensus 205 ~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~------------~~~~ 272 (487)
T TIGR02398 205 DAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA------------ASIR 272 (487)
T ss_pred HHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC------------chHH
Confidence 64331 211100 0 012358999999999988654221 0111
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--C----CeEEEEEecCC-------hhhHHHHHHH
Q 008028 354 LVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--G----NVQIVVLGTGK-------KPMEQQIEQL 420 (580)
Q Consensus 354 ~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~----~v~lii~G~g~-------~~~~~~i~~l 420 (580)
...+.++++++ +..+|++++|++..||+...++|++++.+ | ++.|+++|.+. .+++++++++
T Consensus 273 ~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~ 347 (487)
T TIGR02398 273 EMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQA 347 (487)
T ss_pred HHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHH
Confidence 12355777766 45799999999999999999999999854 3 58999998863 3466677776
Q ss_pred HHHC----CC-----CeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCC----ceEEcCCCCcceeEecC
Q 008028 421 EIIC----PE-----KARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGT----VPIVASTGGLFDTVKEG 487 (580)
Q Consensus 421 ~~~~----~~-----~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~----PvI~s~~gg~~e~i~~~ 487 (580)
..+. +. .+.+...++.++...+|+.||++++||..|+++++..|+++|+. |+|.|..+|..+.+.
T Consensus 348 v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l~-- 425 (487)
T TIGR02398 348 VGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELK-- 425 (487)
T ss_pred HHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhcC--
Confidence 6543 21 23444555777778899999999999999999999999999988 899999999987763
Q ss_pred ceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHH
Q 008028 488 ITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKML 552 (580)
Q Consensus 488 ~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 552 (580)
.++++ +|.|++++|++|.++|.++. +++.+..+.. ....++....++.+++.+
T Consensus 426 -~AllV----------NP~d~~~~A~ai~~AL~m~~-~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l 480 (487)
T TIGR02398 426 -GALLT----------NPYDPVRMDETIYVALAMPK-AEQQARMREMFDAVNYYDVQRWADEFLAAV 480 (487)
T ss_pred -CCEEE----------CCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 46776 99999999999999999843 3333322222 334567666666666544
No 89
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.82 E-value=5.7e-19 Score=190.13 Aligned_cols=234 Identities=15% Similarity=0.095 Sum_probs=161.7
Q ss_pred hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHH
Q 008028 277 NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVK 356 (580)
Q Consensus 277 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 356 (580)
.+++..++.+|.++++|+..++.+.+ .|++ .. +.+++|+ +.+.+.+... ....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~~----------------~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPEL----------------AARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChhh----------------HHHH
Confidence 35567788999999999999999986 4554 12 6777774 3322221110 1113
Q ss_pred HHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCC-------
Q 008028 357 EALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEK------- 427 (580)
Q Consensus 357 ~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~------- 427 (580)
..++++++ + +.++++++|+. .|+.+.+++|++++.+ ++++|+|+|+|+.. .+.++++..+.+..
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45666665 3 44688888874 6789999999998765 78999999998732 13455555443321
Q ss_pred -------eeEeccCChHHHHHHHhcCCEEEe-cCCCCCccHHHHHHHHcCCceEEcCC-CCcceeEecC-ceeEEEeecc
Q 008028 428 -------ARGITKFSTPLAHKIIAGADFMLV-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLFDTVKEG-ITGFQMRSFH 497 (580)
Q Consensus 428 -------v~~~~~~~~~~~~~~~~~aDi~l~-ps~~E~~g~~~lEAma~G~PvI~s~~-gg~~e~i~~~-~~G~~~~~~~ 497 (580)
.+.+++. ..++..+|+.||++++ +|..|++|.+++|||+||+|||++.. ++..+..... .+|+++
T Consensus 296 ~~~~~~~~v~l~~~-~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGDT-MGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEec-HHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 1222222 2356679999999666 56679999999999999999999874 5555554432 467776
Q ss_pred cccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHh
Q 008028 498 VECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLLSMEV 557 (580)
Q Consensus 498 ~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 557 (580)
++.|+++++++|.+++++ ++.+.+|++++.+.--+....++++.+.+.+.+.
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 789999999999999986 7777888877633211124777888888876654
No 90
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.82 E-value=2.1e-18 Score=181.16 Aligned_cols=391 Identities=15% Similarity=0.142 Sum_probs=242.4
Q ss_pred CCCceEEEEeecccCccccccHHHHhccchHHHHh---------CCCeEEEEEecCCcc------cc-c---cCCcEEEE
Q 008028 82 QQGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAA---------RGHRVMSVAPRYDQY------KD-A---WDTSVLAE 142 (580)
Q Consensus 82 ~~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~---------~G~~V~vi~~~y~~~------~~-~---~~~~~~~~ 142 (580)
+..++++|.... ...||..+...+-+..+.. .||+|.+++...+.. .. . ..+..+..
T Consensus 32 ~~~~~~~~~~~~----~~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~v 107 (495)
T KOG0853|consen 32 KPFEHVTFIHPD----LGIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILV 107 (495)
T ss_pred ccchhheeeccc----cccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEE
Confidence 346788888876 2358999998888888888 999999999887655 11 1 11111111
Q ss_pred EEeCCeEEEEE-EE--EEEecCeeEEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCC
Q 008028 143 VKVGDSIETVR-FF--HCYKRGVDRVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNN 219 (580)
Q Consensus 143 ~~~~~~~~~~~-~~--~~~~~gv~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~ 219 (580)
+... ...... +. .....++.++++..-...... ..+ .--+..+ ..++..+.+.++
T Consensus 108 v~~~-lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~-----~~~---------d~~i~d~---~~~~~~l~~~~~---- 165 (495)
T KOG0853|consen 108 VGDW-LPRAMGQFLEQVAGCAYLRILRIPFGILFKWA-----EKV---------DPIIEDF---VSACVPLLKQLS---- 165 (495)
T ss_pred EEee-cCcccchhhhhhhccceeEEEEeccchhhhhh-----hhh---------ceeecch---HHHHHHHHHHhc----
Confidence 1100 000110 00 111233444444321100000 000 0001111 233444444442
Q ss_pred CCCCCCCCCceEEEecCCccchHHHHHHHhhhccCccccceEEEcCCCCCCCCCccchHH-HHHHhcCceeEeeCHHHHH
Q 008028 220 KYFSGPYGEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCRPRYDKPVKGRKINWM-KAGILESDRVLTVSPHYAK 298 (580)
Q Consensus 220 ~~~~~~~~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~ad~vi~vS~~~~~ 298 (580)
+|| +++-|-|...+...++.... |+. +......+.+. ......+|++++.|...+.
T Consensus 166 -------~p~-~~~~i~~~~h~~~~lla~r~---g~~------------~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~ 222 (495)
T KOG0853|consen 166 -------GPD-VIIKIYFYCHFPDSLLAKRL---GVL------------KVLYRHALDKIEEETTGLAWKILVNSYFTKR 222 (495)
T ss_pred -------CCc-ccceeEEeccchHHHhcccc---Ccc------------ceeehhhhhhhhhhhhhccceEecchhhhhh
Confidence 267 66666665555555443321 111 01111122222 2345578999999988888
Q ss_pred HHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEc
Q 008028 299 ELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIG 378 (580)
Q Consensus 299 ~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~G 378 (580)
.+.... .- +....+.+.+-++|.+.+.+.. |+ .+...+...+...+. ......+.-+.
T Consensus 223 ~f~~~~-~~------L~~~d~~~~y~ei~~s~~~~~~-------~~------~~~~~~~~~r~~~~v--~~~d~~~~siN 280 (495)
T KOG0853|consen 223 QFKATF-VS------LSNSDITSTYPEIDGSWFTYGQ-------YE------SHLELRLPVRLYRGV--SGIDRFFPSIN 280 (495)
T ss_pred hhhhhh-hh------cCCCCcceeeccccchhccccc-------cc------cchhcccccceeeee--cccceEeeeee
Confidence 777511 11 2233588888888877766521 10 111112222222233 23346788899
Q ss_pred cCccccCHHHHHHHHhhhcC-------CCeEEEEEecC--------ChhhHHHHHHHHHHCC---CCeeEeccCChHHHH
Q 008028 379 RLEEQKGSDILAQAIPKFMG-------GNVQIVVLGTG--------KKPMEQQIEQLEIICP---EKARGITKFSTPLAH 440 (580)
Q Consensus 379 rl~~~Kg~~~ll~a~~~l~~-------~~v~lii~G~g--------~~~~~~~i~~l~~~~~---~~v~~~~~~~~~~~~ 440 (580)
|+++.|+++++++++.++.. ....++++|+. ...+.+.+.++..++. ..+.+..........
T Consensus 281 ~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~y 360 (495)
T KOG0853|consen 281 RFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKY 360 (495)
T ss_pred ecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHH
Confidence 99999999999999988855 25688888842 1356677788877763 345555555555555
Q ss_pred HHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHH---HHHHHHHH
Q 008028 441 KIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVA---AIAKHVNR 517 (580)
Q Consensus 441 ~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~---~la~~l~~ 517 (580)
.+++.+...+.++..|+||++.+|||+||+||++++.||..|++.++.+||++ +| +.+ .+|+++.+
T Consensus 361 rl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~----------dp-~~e~~~~~a~~~~k 429 (495)
T KOG0853|consen 361 RLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI----------DP-GQEAVAELADALLK 429 (495)
T ss_pred HHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee----------CC-chHHHHHHHHHHHH
Confidence 68888888888888899999999999999999999999999999999999998 77 555 59999999
Q ss_pred HHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHHHHHH
Q 008028 518 AVATYGTPALKEMIQNC---MALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 518 ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
+..+ ++.|.+|++++ +.+.|||+.+.++..++.....
T Consensus 430 l~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 430 LRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred HhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 9998 77788888887 5567999888888777766443
No 91
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.81 E-value=2.5e-18 Score=182.91 Aligned_cols=222 Identities=14% Similarity=0.134 Sum_probs=156.7
Q ss_pred HHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHH
Q 008028 282 GILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQS 361 (580)
Q Consensus 282 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 361 (580)
..+.+|.+++.|+..++.+.+ .|++.+ +|.++.|+++.. |....+ +..+++
T Consensus 144 ~~~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~-f~~~~~-------------------~~~~~~ 194 (391)
T PRK13608 144 ITPYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNK-FETPID-------------------QKQWLI 194 (391)
T ss_pred ccCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChH-hccccc-------------------HHHHHH
Confidence 356899999999999999986 677765 777777777633 222111 446677
Q ss_pred HcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHH
Q 008028 362 QLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHK 441 (580)
Q Consensus 362 ~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~ 441 (580)
+++++.+ ...++++.|++...|+++.+++++.+. .+++++++++++++.+.+.+++.... ..++.+.+ |.. .+..
T Consensus 195 ~~~l~~~-~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G-~~~-~~~~ 269 (391)
T PRK13608 195 DNNLDPD-KQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILG-YTK-HMNE 269 (391)
T ss_pred HcCCCCC-CCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEe-ccc-hHHH
Confidence 8888643 223456789999999999999986432 25789877654443344444443222 23566555 433 3567
Q ss_pred HHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC-CCCccee-----EecCceeEEEeecccccccCCcccHHHHHHHH
Q 008028 442 IIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLFDT-----VKEGITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 442 ~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~-~gg~~e~-----i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
+|+.||+++. ++.|++++|||++|+|+|+++ .+| .|. +.+.+.|+ ...|+++++++|
T Consensus 270 ~~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pg-qe~~N~~~~~~~G~g~------------~~~~~~~l~~~i 332 (391)
T PRK13608 270 WMASSQLMIT----KPGGITISEGLARCIPMIFLNPAPG-QELENALYFEEKGFGK------------IADTPEEAIKIV 332 (391)
T ss_pred HHHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCC-cchhHHHHHHhCCcEE------------EeCCHHHHHHHH
Confidence 9999999995 357999999999999999997 333 221 12333444 346899999999
Q ss_pred HHHHHhcChhHHHHHHHHHH--HhcCCchHHHHHHHHHHHHHH
Q 008028 516 NRAVATYGTPALKEMIQNCM--ALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 516 ~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~ 556 (580)
.+++++ ++.+.+|.+++. ...++++.+++.+++.+....
T Consensus 333 ~~ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 333 ASLTNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred HHHhcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhh
Confidence 999987 778888888874 357999999999999887554
No 92
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.77 E-value=3.1e-17 Score=159.11 Aligned_cols=118 Identities=27% Similarity=0.419 Sum_probs=96.1
Q ss_pred EEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccC-ChHHHHHHHhcCCEEEec
Q 008028 376 FIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKF-STPLAHKIIAGADFMLVP 452 (580)
Q Consensus 376 f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~-~~~~~~~~~~~aDi~l~p 452 (580)
|+|++.++||++.+++++.++.+ ++++++|+|.+.................++.+.+.+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987422211111112233567777776 455566677789999999
Q ss_pred CCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEE
Q 008028 453 SRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQM 493 (580)
Q Consensus 453 s~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~ 493 (580)
|..|++|++++|||++|+|+|+|+.++..|.+.++.+|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999999999999999999999999999999863
No 93
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.76 E-value=1.3e-16 Score=169.81 Aligned_cols=408 Identities=18% Similarity=0.217 Sum_probs=215.8
Q ss_pred ccccHHHHhccchHHHHh-CCCeEEEEEecCCccccccCCcEEEEEEe------------CCeEEEEEEEEEEecCeeEE
Q 008028 99 KTGGLGDVLGGLPPALAA-RGHRVMSVAPRYDQYKDAWDTSVLAEVKV------------GDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 99 ~~GG~g~~~~~l~~aL~~-~G~~V~vi~~~y~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~gv~~~ 165 (580)
|.||+-.++..=++.+.+ .|-+..+|+|....... .. .-++.. ...-..+++-+..++|.+.+
T Consensus 9 KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~---~e-~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~G~P~v 84 (633)
T PF05693_consen 9 KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNAR---TE-VEEIEPDNPLLKDALESMREEGLKVRYGRWLIPGRPIV 84 (633)
T ss_dssp -SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHH---HH-EEE--SSSGGHHHHHHHHHHTT-EEEEEEESSTT--EE
T ss_pred ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccC---CC-CCcCCCCCHHHHHHHHHHHhCCCeEEEeceeECCcCeE
Confidence 489999999888887664 68899999996532110 00 000000 01122455556667777765
Q ss_pred -EecCccch-------hhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHH---hccCCCCCCCCCCCCceEEEe
Q 008028 166 -FVDHPVFL-------EKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRI---LNLNNNKYFSGPYGEDVLFIG 234 (580)
Q Consensus 166 -~l~~~~~~-------~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~---l~~~~~~~~~~~~~pDvVih~ 234 (580)
++|...++ ..+|...| +=.+.. ++ ....-.+|+-++...+.. .... ++.||.|+
T Consensus 85 IL~D~~s~~~~ldeik~~lW~~~g--IdS~~~--~~--dynea~~Fgyava~fi~~f~~~~~~---------~~~ViaHf 149 (633)
T PF05693_consen 85 ILFDFGSFFWKLDEIKGELWELFG--IDSPHG--DG--DYNEAVMFGYAVAWFIEEFYKFYEE---------KPKVIAHF 149 (633)
T ss_dssp EEEEGGGGGGGHHHHHHHHHHHH-------TT---H--HHHHHHHHHHHHHHHHHHHHHH-S----------SEEEEEEE
T ss_pred EEEeCchHHHHHHHHHHHHHHHcC--CCCCCC--Cc--chhHHHHHHHHHHHHHHHHHHhhcC---------CCcEEEEe
Confidence 44654432 23453321 000100 11 122233344444333332 2221 37889999
Q ss_pred cCCccchHHHHHHHhhhccCccccceEEEcC---------CCCCCCCC-----------------ccchHHHHHHhcCce
Q 008028 235 NDWHTALLPCYLKFMYQSKGIHKNAKRLCRP---------RYDKPVKG-----------------RKINWMKAGILESDR 288 (580)
Q Consensus 235 ~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~---------~~~~~~~~-----------------~~~~~~~~~~~~ad~ 288 (580)
|+|.++....+++... ...+++||.| +...+... .+..+++.+...||.
T Consensus 150 HEWmaG~gll~lr~~~-----~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~Adv 224 (633)
T PF05693_consen 150 HEWMAGVGLLYLRKRK-----PDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADV 224 (633)
T ss_dssp ESGGGTTHHHHHHHTT------SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSE
T ss_pred chHhHhHHHHHHhccC-----CCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCe
Confidence 9999999888887653 2334447755 11111110 123567888899999
Q ss_pred eEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHH----HHH-c
Q 008028 289 VLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEAL----QSQ-L 363 (580)
Q Consensus 289 vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~-~ 363 (580)
+.|||+-.+.+... ++.+.+=.++|||+++..+..... +...+...|+.+ +.. +
T Consensus 225 FTTVSeITa~Ea~~----------LL~r~pDvV~pNGl~v~~~~~~~e-----------fqnl~~~~k~ki~~fv~~~f~ 283 (633)
T PF05693_consen 225 FTTVSEITAKEAEH----------LLKRKPDVVTPNGLNVDKFPALHE-----------FQNLHAKAKEKIHEFVRGHFY 283 (633)
T ss_dssp EEESSHHHHHHHHH----------HHSS--SEE----B-GGGTSSTTH-----------HHHHHHHHHHHHHHHHHHHST
T ss_pred eeehhhhHHHHHHH----------HhCCCCCEEcCCCccccccccchH-----------HHHHHHHHHHHHHHHHHHHhc
Confidence 99999988888763 233335588899999887654321 001112223333 222 2
Q ss_pred C-CCCC-CCCcEEEEEccCc-cccCHHHHHHHHhhhcC------CC---eEEEEEecCC--------------hh-----
Q 008028 364 G-LPVD-RNIPLIGFIGRLE-EQKGSDILAQAIPKFMG------GN---VQIVVLGTGK--------------KP----- 412 (580)
Q Consensus 364 g-lp~~-~~~~~i~f~Grl~-~~Kg~~~ll~a~~~l~~------~~---v~lii~G~g~--------------~~----- 412 (580)
| +.-+ ++...|..+||++ .+||+|.+|+|+.+|.. .+ |-|+|+=... +.
T Consensus 284 g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~ 363 (633)
T PF05693_consen 284 GHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTV 363 (633)
T ss_dssp T---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHH
Confidence 3 2222 3556788899997 69999999999999854 12 2344442210 00
Q ss_pred --------------------------------------------------------------hHHHHHHHHHHC----CC
Q 008028 413 --------------------------------------------------------------MEQQIEQLEIIC----PE 426 (580)
Q Consensus 413 --------------------------------------------------------------~~~~i~~l~~~~----~~ 426 (580)
....++++...+ +.
T Consensus 364 ~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drV 443 (633)
T PF05693_consen 364 DEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRV 443 (633)
T ss_dssp HHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SE
T ss_pred HHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCce
Confidence 001333333211 12
Q ss_pred CeeEeccCCh-------HHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEec-----CceeEEEe
Q 008028 427 KARGITKFST-------PLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKE-----GITGFQMR 494 (580)
Q Consensus 427 ~v~~~~~~~~-------~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~-----~~~G~~~~ 494 (580)
+|+|++.|.. ..-..++.+||+.|+||.+||+|.+.+|+.++|+|.|+|+..|....+.+ ...|..+=
T Consensus 444 KVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~Vv 523 (633)
T PF05693_consen 444 KVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVV 523 (633)
T ss_dssp EEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE
T ss_pred EEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEE
Confidence 5666666521 11236899999999999999999999999999999999999987665543 34566551
Q ss_pred ecccccccCCcccHHHHHHHHHHHHHhc---ChhHHHHHHHHH--HHhcCCchHHHHHHHHHHHHHHhc
Q 008028 495 SFHVECDRVDLADVAAIAKHVNRAVATY---GTPALKEMIQNC--MALDLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 495 ~~~~~~~~v~~~d~~~la~~l~~ll~~~---~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~~ 558 (580)
.- ...+.++.++.|.+.+..+ .+.++..+..++ +++.++|+.+...|.+.|..++..
T Consensus 524 dR-------~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 524 DR-------RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp -S-------SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred eC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 11 1233455555554444432 123333333333 667999999999999999877654
No 94
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.72 E-value=4.9e-16 Score=176.53 Aligned_cols=294 Identities=16% Similarity=0.165 Sum_probs=200.4
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCC-CCCCCCCccch---HHHHHHhcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPR-YDKPVKGRKIN---WMKAGILESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~-~~~~~~~~~~~---~~~~~~~~ad~vi~vS~~~~~~l~ 301 (580)
+|+.+|..||+|..++|.+++... ...++ |.+|- +......+.+. .+-.++..||.|-+.+..+++.+.
T Consensus 230 ~~gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl 303 (934)
T PLN03064 230 EEGDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFV 303 (934)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHH
Confidence 354489999999999999998863 45667 66663 22222222222 334567799999999999999988
Q ss_pred ccccC--Ccch--hhhh---hcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 302 SGEEK--GVEL--DNII---RKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 302 ~~~~~--g~~~--~~~~---~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
+.+.+ |.+. ..+. +..+|.+.|-|||...|...... ......-+.++++++ +..+|
T Consensus 304 ~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~------------~~v~~~~~~lr~~~~-----g~kiI 366 (934)
T PLN03064 304 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET------------PQVQQHIKELKERFA-----GRKVM 366 (934)
T ss_pred HHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC------------hhHHHHHHHHHHHhC-----CceEE
Confidence 64332 2110 1110 12357788999999888643211 000111345666654 44699
Q ss_pred EEEccCccccCHHHHHHHHhhhcC--CC----eEEEEEe-----cCC--hhhHHHHHHHHH----HCCCC----eeEec-
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMG--GN----VQIVVLG-----TGK--KPMEQQIEQLEI----ICPEK----ARGIT- 432 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~--~~----v~lii~G-----~g~--~~~~~~i~~l~~----~~~~~----v~~~~- 432 (580)
+.++|++..||+...++|++++.+ +. +.|+-+. +++ .+++.++.++.. +++.. |.++.
T Consensus 367 lgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~ 446 (934)
T PLN03064 367 LGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (934)
T ss_pred EEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEecc
Confidence 999999999999999999998754 33 4444333 222 234455555444 33220 22222
Q ss_pred cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCC----ceEEcCCCCcceeEecCceeEEEeecccccccCCcccH
Q 008028 433 KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGT----VPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADV 508 (580)
Q Consensus 433 ~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~----PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~ 508 (580)
.++.++...+|+.||++++||..|+++++.+|||+|+. ++|.|...|..+.+ +..++++ +|.|+
T Consensus 447 ~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllV----------NP~D~ 514 (934)
T PLN03064 447 SLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILV----------NPWNI 514 (934)
T ss_pred CCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEE----------CCCCH
Confidence 24567777899999999999999999999999999954 57779988888877 3357776 99999
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHHHHHH
Q 008028 509 AAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 509 ~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
+++|++|.++|... .+++..+.+.. ....+|+...++.+++.+....
T Consensus 515 ~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 515 TEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred HHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 99999999999962 45555555444 3367999999999888777664
No 95
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.71 E-value=5.9e-16 Score=163.33 Aligned_cols=265 Identities=17% Similarity=0.069 Sum_probs=167.6
Q ss_pred CCceEEEec-CCccchHHHHHHHhhhccCccccceEEEcC-CCCCCCCC--ccchHHHHHH-hcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGN-DWHTALLPCYLKFMYQSKGIHKNAKRLCRP-RYDKPVKG--RKINWMKAGI-LESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~-~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~-~~~~~~~~--~~~~~~~~~~-~~ad~vi~vS~~~~~~l~ 301 (580)
+|| ++|+| |+.+++.+..+....+. ++..++ +....... ..-.+.+..+ +.||.++++|+..++.+.
T Consensus 86 ~pD-iv~~~gd~~~~la~a~aa~~~~i-------pv~h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~ 157 (365)
T TIGR00236 86 KPD-IVLVQGDTTTTLAGALAAFYLQI-------PVGHVEAGLRTGDRYSPMPEEINRQLTGHIADLHFAPTEQAKDNLL 157 (365)
T ss_pred CCC-EEEEeCCchHHHHHHHHHHHhCC-------CEEEEeCCCCcCCCCCCCccHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 699 78887 67766766666555432 221111 11100000 1112224444 468999999999999998
Q ss_pred ccccCCcchhhhhhcCCeeEecCCC-CCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEc-c
Q 008028 302 SGEEKGVELDNIIRKTGISGIVNGM-DVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIG-R 379 (580)
Q Consensus 302 ~~~~~g~~~~~~~~~~~i~~I~NGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~G-r 379 (580)
+ .|++.+ +|.+++||+ |...+..... .+..++++++. +.+++++.+ |
T Consensus 158 ~---~G~~~~------~I~vign~~~d~~~~~~~~~------------------~~~~~~~~~~~----~~~~vl~~~hr 206 (365)
T TIGR00236 158 R---ENVKAD------SIFVTGNTVIDALLTNVEIA------------------YSSPVLSEFGE----DKRYILLTLHR 206 (365)
T ss_pred H---cCCCcc------cEEEeCChHHHHHHHHHhhc------------------cchhHHHhcCC----CCCEEEEecCc
Confidence 7 577765 899999997 4322211100 02334555552 224555555 5
Q ss_pred C-ccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCC
Q 008028 380 L-EEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFE 456 (580)
Q Consensus 380 l-~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E 456 (580)
. ...|+++.+++++.++.+ ++++++++|.+.....+.+.+.. ...+++.+...........+++.||+++.+|
T Consensus 207 ~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S--- 282 (365)
T TIGR00236 207 RENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDFLNLAANSHLILTDS--- 282 (365)
T ss_pred hhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHHHHHHHhCCEEEECC---
Confidence 4 346899999999999854 57899998765433444333322 2334677776655555567999999999877
Q ss_pred CccHHHHHHHHcCCceEEc-CCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH-
Q 008028 457 PCGLIQLHAMRYGTVPIVA-STGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC- 534 (580)
Q Consensus 457 ~~g~~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~- 534 (580)
|..++|||++|+|+|++ +.|+..+.+..+ .++++ +.|++++++++.+++++ ++.+.+|.++.
T Consensus 283 --g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d~~~i~~ai~~ll~~--~~~~~~~~~~~~ 346 (365)
T TIGR00236 283 --GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTDKENITKAAKRLLTD--PDEYKKMSNASN 346 (365)
T ss_pred --hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCCHHHHHHHHHHHHhC--hHHHHHhhhcCC
Confidence 66789999999999996 578888777655 45543 47899999999999986 56666665543
Q ss_pred -HHhcCCchHHHHHHHH
Q 008028 535 -MALDLSWKEPARLWEK 550 (580)
Q Consensus 535 -~~~~fs~~~~a~~~~~ 550 (580)
+....+++++++...+
T Consensus 347 ~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 347 PYGDGEASERIVEELLN 363 (365)
T ss_pred CCcCchHHHHHHHHHHh
Confidence 2223444555544443
No 96
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.69 E-value=8.8e-15 Score=153.95 Aligned_cols=246 Identities=17% Similarity=0.117 Sum_probs=153.8
Q ss_pred CCceEEEecCC-ccchHHHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHH-HHhcCceeEeeCHHHHHHHHcc
Q 008028 227 GEDVLFIGNDW-HTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKA-GILESDRVLTVSPHYAKELISG 303 (580)
Q Consensus 227 ~pDvVih~~~~-~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~-~~~~ad~vi~vS~~~~~~l~~~ 303 (580)
+|| ++|+|.. ...+.+.......+ .++ .+.++...........+.+. ..+.+|.++++|+..++.+.+
T Consensus 88 ~pD-vV~~~g~~~~~~~~~~aa~~~~-------iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~- 158 (363)
T cd03786 88 KPD-LVLVLGDTNETLAAALAAFKLG-------IPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPTEEARRNLLQ- 158 (363)
T ss_pred CCC-EEEEeCCchHHHHHHHHHHHcC-------CCEEEEecccccCCCCCCchHHHHHHHHHhhhccCCCHHHHHHHHH-
Confidence 599 7888853 33344444444432 233 22222111001111223333 456899999999999999986
Q ss_pred ccCCcchhhhhhcCCeeEecCCC-CCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCcc
Q 008028 304 EEKGVELDNIIRKTGISGIVNGM-DVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEE 382 (580)
Q Consensus 304 ~~~g~~~~~~~~~~~i~~I~NGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~ 382 (580)
.|++.+ +|.+++|++ |...+.+.... ....++.++++ ++..++++.||...
T Consensus 159 --~G~~~~------kI~vign~v~d~~~~~~~~~~------------------~~~~~~~~~~~--~~~~vlv~~~r~~~ 210 (363)
T cd03786 159 --EGEPPE------RIFVVGNTMIDALLRLLELAK------------------KELILELLGLL--PKKYILVTLHRVEN 210 (363)
T ss_pred --cCCCcc------cEEEECchHHHHHHHHHHhhc------------------cchhhhhcccC--CCCEEEEEeCCccc
Confidence 677765 899999996 53322211110 11234566765 23457778999875
Q ss_pred ---ccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHC---CCCeeEeccCChHHHHHHHhcCCEEEecCCCC
Q 008028 383 ---QKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIIC---PEKARGITKFSTPLAHKIIAGADFMLVPSRFE 456 (580)
Q Consensus 383 ---~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~---~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E 456 (580)
.|+++.++++++++.+.++++++.|.+. ..+.+++...++ .+++.+...........+++.||+++.+|-
T Consensus 211 ~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-- 286 (363)
T cd03786 211 VDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG-- 286 (363)
T ss_pred cCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc--
Confidence 7999999999998865457777766654 334444444433 245666654444566679999999999983
Q ss_pred CccHHHHHHHHcCCceEEcCCCC-cceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHH
Q 008028 457 PCGLIQLHAMRYGTVPIVASTGG-LFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEM 530 (580)
Q Consensus 457 ~~g~~~lEAma~G~PvI~s~~gg-~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~ 530 (580)
| ++.|||++|+|+|++...+ ..+.+..| .++. ...|+++++++|.+++++ +..+..|
T Consensus 287 --g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~-----------~~~~~~~i~~~i~~ll~~--~~~~~~~ 344 (363)
T cd03786 287 --G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVL-----------VGTDPEAILAAIEKLLSD--EFAYSLM 344 (363)
T ss_pred --c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEe-----------cCCCHHHHHHHHHHHhcC--chhhhcC
Confidence 4 5799999999999997543 45555433 2232 223699999999999986 4444444
No 97
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.69 E-value=1.4e-14 Score=150.94 Aligned_cols=185 Identities=16% Similarity=0.105 Sum_probs=133.8
Q ss_pred chHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHH
Q 008028 276 INWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLV 355 (580)
Q Consensus 276 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 355 (580)
..+++..++.||.++++|+.+++.+.+ .|++.+ ++.+++|..+.....+..
T Consensus 114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~~-------------------- 164 (333)
T PRK09814 114 MKEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELVK-------------------- 164 (333)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEecccccccccccccc--------------------
Confidence 456788999999999999999999986 565433 666665544321110000
Q ss_pred HHHHHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCC
Q 008028 356 KEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFS 435 (580)
Q Consensus 356 ~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~ 435 (580)
.....+.|+|+|++...++ +.. ..++++|+|+|+|+... ....++.+.+.++
T Consensus 165 -----------~~~~~~~i~yaG~l~k~~~----l~~----~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~ 216 (333)
T PRK09814 165 -----------TPSFQKKINFAGNLEKSPF----LKN----WSQGIKLTVFGPNPEDL---------ENSANISYKGWFD 216 (333)
T ss_pred -----------cccCCceEEEecChhhchH----HHh----cCCCCeEEEECCCcccc---------ccCCCeEEecCCC
Confidence 0123468999999984332 111 23579999999987321 2345799999999
Q ss_pred hHHHHHHHhcCCEEEecCCC-----------CCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCC
Q 008028 436 TPLAHKIIAGADFMLVPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVD 504 (580)
Q Consensus 436 ~~~~~~~~~~aDi~l~ps~~-----------E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~ 504 (580)
.+++..+++. |+.+++... -++|.++.++|+||+|||+++.+++.+++.++.+|+++ +
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~ 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C
Confidence 9998888888 776665321 25788899999999999999999999999999999997 5
Q ss_pred cccHHHHHHHHHHHHHhcChhHHHHHHHHH
Q 008028 505 LADVAAIAKHVNRAVATYGTPALKEMIQNC 534 (580)
Q Consensus 505 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~ 534 (580)
+.++++++|.++. ++++.+|++++
T Consensus 286 --~~~el~~~l~~~~----~~~~~~m~~n~ 309 (333)
T PRK09814 286 --SLEELPEIIDNIT----EEEYQEMVENV 309 (333)
T ss_pred --CHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 6778888888753 34566777766
No 98
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.68 E-value=6e-15 Score=156.35 Aligned_cols=220 Identities=15% Similarity=0.083 Sum_probs=142.1
Q ss_pred HHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHH
Q 008028 280 KAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEAL 359 (580)
Q Consensus 280 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 359 (580)
+...+.+|.+++.|+...+.+.+ .|. ++.++.|.+.... .+.. .+..+
T Consensus 129 ~~~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~-~~~~-------------------~~~~~ 176 (380)
T PRK00025 129 FKIAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAI-PLLP-------------------DRAAA 176 (380)
T ss_pred HHHHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhc-cccc-------------------ChHHH
Confidence 34577899999999988888764 332 3444444443211 1100 14556
Q ss_pred HHHcCCCCCCCCcEE-EEEc-cCccc-cCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHC-CCCeeEecc
Q 008028 360 QSQLGLPVDRNIPLI-GFIG-RLEEQ-KGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIIC-PEKARGITK 433 (580)
Q Consensus 360 ~~~~glp~~~~~~~i-~f~G-rl~~~-Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~-~~~v~~~~~ 433 (580)
+++++++. +.+++ ++.| |..+. +..+.++++++.+.+ ++++++++|.++ ...+.++++..+. +..+.+
T Consensus 177 ~~~l~~~~--~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~--- 250 (380)
T PRK00025 177 RARLGLDP--DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL--- 250 (380)
T ss_pred HHHcCCCC--CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---
Confidence 77888863 34554 4555 45454 447899999998854 579999998633 2445555555444 323333
Q ss_pred CChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEc-----------------CCCCcceeEecCc--eeEEEe
Q 008028 434 FSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLFDTVKEGI--TGFQMR 494 (580)
Q Consensus 434 ~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s-----------------~~gg~~e~i~~~~--~G~~~~ 494 (580)
++ .....+|+.||+++.+| |++.+|||++|+|+|++ +.+++.+++.++. .++..
T Consensus 251 ~~-~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 323 (380)
T PRK00025 251 LD-GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQ- 323 (380)
T ss_pred Ec-ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcC-
Confidence 22 34567999999999986 88999999999999987 4455566665543 34443
Q ss_pred ecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHHHHHH
Q 008028 495 SFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 495 ~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
+..|++.+++++.+++++ ++.+.+|.+++ ..+.. -...+++..+.+.++.
T Consensus 324 ---------~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 324 ---------EEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred ---------CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 678899999999999997 77777777765 22333 2334555555555443
No 99
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.66 E-value=1.8e-14 Score=147.04 Aligned_cols=223 Identities=26% Similarity=0.435 Sum_probs=166.8
Q ss_pred cCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcC
Q 008028 285 ESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLG 364 (580)
Q Consensus 285 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 364 (580)
..+.+++.|......+.. ... ..++..++|+++...+.+.. .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~---------------------------~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPAR---------------------------IG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCccc---------------------------cC
Confidence 378888988877555443 111 11678999999987765420 01
Q ss_pred CCCCCCCcEEEEEccCccccCHHHHHHHHhhhcCC--CeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHH
Q 008028 365 LPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGG--NVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAH 440 (580)
Q Consensus 365 lp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~--~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~ 440 (580)
+..+.....++++||+.+.||++.+++++..+... +++++++|.+... ...+..+..+.. .++.+.+........
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 11111136899999999999999999999999763 3899999998753 233333444432 457776666645555
Q ss_pred HHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHH
Q 008028 441 KIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 441 ~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
.+++.||++++||..|++|++++|||++|+|+|+++.++..+.+.++.+|+++ ++.|.+++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999988778854 66689999999999998
Q ss_pred hcChhHHHHHHH---HHHHhcCCchHHHHHHHHHHHHHHh
Q 008028 521 TYGTPALKEMIQ---NCMALDLSWKEPARLWEKMLLSMEV 557 (580)
Q Consensus 521 ~~~~~~~~~~~~---~~~~~~fs~~~~a~~~~~~~~~l~~ 557 (580)
+ .+.+..+.+ +.....|+|+.+++.+.+++.....
T Consensus 342 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 D--PELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred C--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 7 344444443 2234789999999999999987753
No 100
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.57 E-value=6.3e-13 Score=131.11 Aligned_cols=223 Identities=15% Similarity=0.160 Sum_probs=166.2
Q ss_pred hcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHc
Q 008028 284 LESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQL 363 (580)
Q Consensus 284 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 363 (580)
..||.+++.|.+..+++.+ .| ....+.+|+..++++.+. +..
T Consensus 221 ~~ad~vm~NssWT~nHI~q-iW---------~~~~~~iVyPPC~~e~lk----------------------------s~~ 262 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQ-IW---------QSNTCSIVYPPCSTEDLK----------------------------SKF 262 (465)
T ss_pred ccceEEEecchhhHHHHHH-Hh---------hccceeEEcCCCCHHHHH----------------------------HHh
Confidence 3689999999999888875 22 122667777777765432 222
Q ss_pred CCCCCCCCcEEEEEccCccccCHH-HHHHHHhhhcC------CCeEEEEEecCC----hhhHHHHHHHHHHC--CCCeeE
Q 008028 364 GLPVDRNIPLIGFIGRLEEQKGSD-ILAQAIPKFMG------GNVQIVVLGTGK----KPMEQQIEQLEIIC--PEKARG 430 (580)
Q Consensus 364 glp~~~~~~~i~f~Grl~~~Kg~~-~ll~a~~~l~~------~~v~lii~G~g~----~~~~~~i~~l~~~~--~~~v~~ 430 (580)
+- .+.+.+.++++|.+.|.|+.. +=++|+...+. .+++|+|+|... .+.-+.++.++.++ +.++.|
T Consensus 263 ~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 22 234668999999999999999 44455544333 479999999953 23445566666644 457888
Q ss_pred eccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcc-eeEec---CceeEEEeecccccccCCcc
Q 008028 431 ITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLF-DTVKE---GITGFQMRSFHVECDRVDLA 506 (580)
Q Consensus 431 ~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~-e~i~~---~~~G~~~~~~~~~~~~v~~~ 506 (580)
..+.+-+.+-.++..|.+.+++-..|-||+++.|+||+|+.+|+.+.||.. |++.+ ..+||+. .
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------~ 409 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------P 409 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------C
Confidence 888777777789999999999999999999999999999999999987754 55543 3578874 6
Q ss_pred cHHHHHHHHHHHHHhcChhHHHHHHHHHHH--hcCCchHHHHHHHHHHHHHHhc
Q 008028 507 DVAAIAKHVNRAVATYGTPALKEMIQNCMA--LDLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 507 d~~~la~~l~~ll~~~~~~~~~~~~~~~~~--~~fs~~~~a~~~~~~~~~l~~~ 558 (580)
+.++.|+++.++++. +.+++..|.+++.. .+|+-.+..++|...+.+++.+
T Consensus 410 t~~EYaE~iLkIv~~-~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 410 TDEEYAEAILKIVKL-NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred ChHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 788999999999996 34556666666533 5899999999999888888753
No 101
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.54 E-value=2e-14 Score=129.03 Aligned_cols=130 Identities=26% Similarity=0.376 Sum_probs=93.7
Q ss_pred CcEEEEEccCccccCHHHHHH-HHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCC
Q 008028 371 IPLIGFIGRLEEQKGSDILAQ-AIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGAD 447 (580)
Q Consensus 371 ~~~i~f~Grl~~~Kg~~~ll~-a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aD 447 (580)
.++|+++|++.+.|+++.+++ +++++.+ ++++|+|+|.+++ +++++ .. .++.+.+.. +....+++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 468999999999999999999 9998865 7899999999875 24444 22 358887777 45677999999
Q ss_pred EEEecCC-CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHh
Q 008028 448 FMLVPSR-FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 448 i~l~ps~-~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 521 (580)
+.++|+. .++++++++|||++|+|+|+++. +..++......|+. -.+|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVL-----------VANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEE-----------ECCCHHHHHHHHHHHhcC
Confidence 9999996 57899999999999999999999 56676665566665 367999999999999874
No 102
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.45 E-value=5.7e-12 Score=134.07 Aligned_cols=291 Identities=13% Similarity=0.085 Sum_probs=196.6
Q ss_pred CceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCC-CCCCCCCccc---hHHHHHHhcCceeEeeCHHHHHHHHc
Q 008028 228 EDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPR-YDKPVKGRKI---NWMKAGILESDRVLTVSPHYAKELIS 302 (580)
Q Consensus 228 pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~-~~~~~~~~~~---~~~~~~~~~ad~vi~vS~~~~~~l~~ 302 (580)
||.+|..||+|..++|.+++... ...++ |.+|- +.+....+.+ ..+-.++..+|.|-+.+..+++.+.+
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~ 196 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRG------VNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLD 196 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHH
Confidence 44499999999999999998763 34566 66552 2222222222 23455677999999999999988876
Q ss_pred cccC--Ccchh---hh---hhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEE
Q 008028 303 GEEK--GVELD---NI---IRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLI 374 (580)
Q Consensus 303 ~~~~--g~~~~---~~---~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i 374 (580)
.+.. |.+.. .+ -+..++.+.|-|||.+.|...... . ....-+.+++.++ +..+|
T Consensus 197 ~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~------------~-~~~~~~~lr~~~~-----~~~li 258 (474)
T PRK10117 197 CLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG------------P-LPPKLAQLKAELK-----NVQNI 258 (474)
T ss_pred HHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc------------h-HHHHHHHHHHHcC-----CCeEE
Confidence 3331 21110 00 122367888899998877543211 0 0111234555544 44689
Q ss_pred EEEccCccccCHHHHHHHHhhhcC------CCeEEEEEecCC-------hhhHHHHHHHHH----HCCC-C---eeEe-c
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMG------GNVQIVVLGTGK-------KPMEQQIEQLEI----ICPE-K---ARGI-T 432 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~------~~v~lii~G~g~-------~~~~~~i~~l~~----~~~~-~---v~~~-~ 432 (580)
+-+.|++..||+..=++|++++.+ .++.|+-+.... .+++.+++++.. +++. . |.++ -
T Consensus 259 lgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~ 338 (474)
T PRK10117 259 FSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ 338 (474)
T ss_pred EEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecC
Confidence 999999999999999999999865 377777665532 245555555544 4432 1 2222 2
Q ss_pred cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCC-----ceEEcCCCCcceeEecCceeEEEeecccccccCCccc
Q 008028 433 KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLAD 507 (580)
Q Consensus 433 ~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~-----PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d 507 (580)
.++.+++..+|+.||+++++|..+|.-++..|+.+|.. ++|.|...|..+.+.+ .+++ +|.|
T Consensus 339 ~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~~---AllV----------NP~d 405 (474)
T PRK10117 339 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIV----------NPYD 405 (474)
T ss_pred CCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhCC---CeEE----------CCCC
Confidence 34556666799999999999999999999999999954 3899998888888742 4444 9999
Q ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHHHHHH
Q 008028 508 VAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 508 ~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
.+++|++|.++|..+ .+++.+..+.. ....++....++.+++.+..+.
T Consensus 406 ~~~~A~Ai~~AL~Mp-~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 406 RDEVAAALDRALTMP-LAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHHHHHHHHHHHcCC-HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 999999999999984 33433333332 3356777777888887777654
No 103
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.42 E-value=8.8e-11 Score=124.66 Aligned_cols=194 Identities=17% Similarity=0.058 Sum_probs=120.8
Q ss_pred HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHH
Q 008028 279 MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEA 358 (580)
Q Consensus 279 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 358 (580)
.+...+.+|++++.++...+.+.+ .|. ++.++.|++-........ .+..
T Consensus 132 ~r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~ 180 (385)
T TIGR00215 132 AKKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKS 180 (385)
T ss_pred HHHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHH
Confidence 466678999999999988887764 232 556677776322111001 1455
Q ss_pred HHHHcCCCCCCCCcEEEEE-c-cCcc-ccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHC--CCCeeEe
Q 008028 359 LQSQLGLPVDRNIPLIGFI-G-RLEE-QKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIIC--PEKARGI 431 (580)
Q Consensus 359 ~~~~~glp~~~~~~~i~f~-G-rl~~-~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~--~~~v~~~ 431 (580)
.+++++++ ++.++|++. | |..+ .|+...++++++.+.+ +++++++.+.... ....++++..++ ..++.++
T Consensus 181 ~r~~lgl~--~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~ 257 (385)
T TIGR00215 181 AREKLGID--HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI 257 (385)
T ss_pred HHHHcCCC--CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE
Confidence 67788886 345677655 3 7777 7899999999998865 5788877654321 233444444433 2234433
Q ss_pred ccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCC-CCcceeEecC--------------ceeEEEeec
Q 008028 432 TKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAST-GGLFDTVKEG--------------ITGFQMRSF 496 (580)
Q Consensus 432 ~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~-gg~~e~i~~~--------------~~G~~~~~~ 496 (580)
. .+ ...+|+.||++|.+| |++.+|+|++|+|+|...- ..+.-.+... +.+.+ .++
T Consensus 258 ~---~~-~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~-pel 327 (385)
T TIGR00215 258 D---GD-ARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLV-PEL 327 (385)
T ss_pred C---ch-HHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccc-hhh
Confidence 2 22 345899999999998 8888899999999888742 2111111100 01111 011
Q ss_pred ccccccCCcccHHHHHHHHHHHHHh
Q 008028 497 HVECDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 497 ~~~~~~v~~~d~~~la~~l~~ll~~ 521 (580)
-. +..+++.+++.+.+++++
T Consensus 328 ~q-----~~~~~~~l~~~~~~ll~~ 347 (385)
T TIGR00215 328 LQ-----EECTPHPLAIALLLLLEN 347 (385)
T ss_pred cC-----CCCCHHHHHHHHHHHhcC
Confidence 11 445788999999999987
No 104
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=4.9e-11 Score=118.05 Aligned_cols=239 Identities=15% Similarity=0.153 Sum_probs=152.7
Q ss_pred HHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCc---cccccccCch------hh
Q 008028 278 WMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTD---RYINVNYDAT------TV 348 (580)
Q Consensus 278 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~---~~l~~~~~~~------~~ 348 (580)
.++..-+.||.-+||++.+.+++.+ ..|+. +..+++.--.. .|..- .+++.+...+ ..
T Consensus 162 ~E~~fgk~a~~nLcVT~AMr~dL~q--nWgi~--------ra~v~YDrPps---~~~~l~~~H~lf~~l~~d~~~f~ar~ 228 (444)
T KOG2941|consen 162 LEKYFGKLADYNLCVTKAMREDLIQ--NWGIN--------RAKVLYDRPPS---KPTPLDEQHELFMKLAGDHSPFRARE 228 (444)
T ss_pred HHHHhhcccccchhhHHHHHHHHHH--hcCCc--------eeEEEecCCCC---CCCchhHHHHHHhhhccccchhhhcc
Confidence 3455557899999999999999987 23432 33333321000 11100 0011111110 01
Q ss_pred hccchHHHHHHHHHcC---CCCCCCCc-EEEEEccCccccCHHHHHHHHhhh-----cC----CCeEEEEEecCChhhHH
Q 008028 349 MNAKPLVKEALQSQLG---LPVDRNIP-LIGFIGRLEEQKGSDILAQAIPKF-----MG----GNVQIVVLGTGKKPMEQ 415 (580)
Q Consensus 349 ~~~~~~~~~~~~~~~g---lp~~~~~~-~i~f~Grl~~~Kg~~~ll~a~~~l-----~~----~~v~lii~G~g~~~~~~ 415 (580)
++.+..+..++-++.. ....++.| +++....+.+..++.+|++|+... .+ +.+-.+|.|+|+ +++
T Consensus 229 ~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP--lkE 306 (444)
T KOG2941|consen 229 PQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP--LKE 306 (444)
T ss_pred cccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc--hhH
Confidence 2333444444444433 11112333 566777889999999999999843 11 577888889998 333
Q ss_pred HHHHHHHHCC-CCeeEe-ccCChHHHHHHHhcCCEEEe--cCCC-CCccHHHHHHHHcCCceEEcCCCCcceeEecCcee
Q 008028 416 QIEQLEIICP-EKARGI-TKFSTPLAHKIIAGADFMLV--PSRF-EPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITG 490 (580)
Q Consensus 416 ~i~~l~~~~~-~~v~~~-~~~~~~~~~~~~~~aDi~l~--ps~~-E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G 490 (580)
...+...+++ .++.+. .+...+..+.+++.||+.|. +|.. =-.|+++..-..||+||++-+..-+.|++++++||
T Consensus 307 ~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNG 386 (444)
T KOG2941|consen 307 KYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENG 386 (444)
T ss_pred HHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCc
Confidence 3333333332 234333 44566777889999998664 4432 24789999999999999999999999999999999
Q ss_pred EEEeecccccccCCcccHHHHHHHHHHHHHhcCh--hHHHHHHHHHHH-hcCCchH
Q 008028 491 FQMRSFHVECDRVDLADVAAIAKHVNRAVATYGT--PALKEMIQNCMA-LDLSWKE 543 (580)
Q Consensus 491 ~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~--~~~~~~~~~~~~-~~fs~~~ 543 (580)
++| .|.+++++.|.-+++++.. +++.+..++..+ +...|+.
T Consensus 387 lvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~ 430 (444)
T KOG2941|consen 387 LVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDE 430 (444)
T ss_pred eEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHH
Confidence 998 7899999999999996543 567777777655 3566654
No 105
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.38 E-value=2.4e-11 Score=130.88 Aligned_cols=292 Identities=18% Similarity=0.161 Sum_probs=166.5
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCC-CCCCCccc---hHHHHHHhcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYD-KPVKGRKI---NWMKAGILESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~-~~~~~~~~---~~~~~~~~~ad~vi~vS~~~~~~l~ 301 (580)
++|.+|..||+|..++|.+++.... ..++ |.+|-.. +....+.+ ..+-.++..||.|-+.+..+++.+.
T Consensus 140 ~~~D~VWVhDYhL~llP~~LR~~~~------~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl 213 (474)
T PF00982_consen 140 RPGDLVWVHDYHLMLLPQMLRERGP------DARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFL 213 (474)
T ss_dssp -TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHH
T ss_pred cCCCEEEEeCCcHHHHHHHHHhhcC------CceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHH
Confidence 3555999999999999999988643 3566 6666322 22212222 3345567799999999999999887
Q ss_pred ccccC--Ccchhhh-------hhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCc
Q 008028 302 SGEEK--GVELDNI-------IRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIP 372 (580)
Q Consensus 302 ~~~~~--g~~~~~~-------~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~ 372 (580)
+.+.. |.+...- -+..++.+.|-|+|.+.+...... ..-....+.+++.++ .+..
T Consensus 214 ~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~------------~~v~~~~~~l~~~~~----~~~~ 277 (474)
T PF00982_consen 214 SCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS------------PEVQERAEELREKFK----GKRK 277 (474)
T ss_dssp HHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-------------S---HHHHHHHHHTT----T-SE
T ss_pred HHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC------------hHHHHHHHHHHHhcC----CCcE
Confidence 54331 2111100 012357778888887766422100 000111345666654 1347
Q ss_pred EEEEEccCccccCHHHHHHHHhhhcC------CCeEEEEEecCC-------hhhHHHHHHHH----HHCCCC----eeEe
Q 008028 373 LIGFIGRLEEQKGSDILAQAIPKFMG------GNVQIVVLGTGK-------KPMEQQIEQLE----IICPEK----ARGI 431 (580)
Q Consensus 373 ~i~f~Grl~~~Kg~~~ll~a~~~l~~------~~v~lii~G~g~-------~~~~~~i~~l~----~~~~~~----v~~~ 431 (580)
+|+-+.|++..||+..=++|++++.+ .++.|+-++... .++..++.++. .+++.. |.++
T Consensus 278 ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~ 357 (474)
T PF00982_consen 278 IIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYI 357 (474)
T ss_dssp EEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE
T ss_pred EEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEE
Confidence 99999999999999999999999865 478888776632 13444444443 345421 3333
Q ss_pred c-cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCc----eEEcCCCCcceeEecCceeEEEeecccccccCCcc
Q 008028 432 T-KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTV----PIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLA 506 (580)
Q Consensus 432 ~-~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~P----vI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~ 506 (580)
. ..+.+..-.+|+.||+++++|..++.-++..|+.+|... +|.|...|..+.+.++ .+.+ +|.
T Consensus 358 ~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~--al~V----------NP~ 425 (474)
T PF00982_consen 358 YRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA--ALLV----------NPW 425 (474)
T ss_dssp -S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS---EEE-----------TT
T ss_pred ecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc--cEEE----------CCC
Confidence 3 355666678999999999999999999999999999554 8999988888887553 2554 999
Q ss_pred cHHHHHHHHHHHHHhcChhHHHHHHHHH--HHhcCCchHHHHHHHHHHH
Q 008028 507 DVAAIAKHVNRAVATYGTPALKEMIQNC--MALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 507 d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~ 553 (580)
|.+++|++|.++|+.. .+++....+.. ....++....++.+++-++
T Consensus 426 d~~~~A~ai~~AL~M~-~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 426 DIEEVADAIHEALTMP-PEERKERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp -HHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHcCC-HHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 9999999999999973 33433333332 2345676666666665543
No 106
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.38 E-value=2.5e-11 Score=132.60 Aligned_cols=162 Identities=12% Similarity=0.084 Sum_probs=130.5
Q ss_pred cEEEEEc--cCccccCHHHHHHHHhhhc--CCCeEEEEEecCCh-hhHHHH----HHHHHHCC-----------------
Q 008028 372 PLIGFIG--RLEEQKGSDILAQAIPKFM--GGNVQIVVLGTGKK-PMEQQI----EQLEIICP----------------- 425 (580)
Q Consensus 372 ~~i~f~G--rl~~~Kg~~~ll~a~~~l~--~~~v~lii~G~g~~-~~~~~i----~~l~~~~~----------------- 425 (580)
..+++++ |+ +.|.++.+|+++.++. .++++|.+.|.+.. ++.+.+ +++..++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 4688888 99 9999999999999984 48999999999862 233444 44432210
Q ss_pred ----------CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEee
Q 008028 426 ----------EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRS 495 (580)
Q Consensus 426 ----------~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~ 495 (580)
.+|.+.+.-+...+.+.+..+.++|.+|..|+++ +++||++.|+|+| .-|..+++.++.||+++
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li-- 472 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII-- 472 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--
Confidence 2344433233335557999999999999999999 9999999999999 44569999999999996
Q ss_pred cccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHH--hcCCchHHHHHHHHHH
Q 008028 496 FHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMA--LDLSWKEPARLWEKML 552 (580)
Q Consensus 496 ~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~--~~fs~~~~a~~~~~~~ 552 (580)
+|..+++++|..+|.+ ...|.++...+++ ++||-+.+.++|.+++
T Consensus 473 ----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 473 ----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 8999999999999997 7889999988854 7899999999998753
No 107
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.29 E-value=2.4e-10 Score=131.05 Aligned_cols=293 Identities=14% Similarity=0.120 Sum_probs=192.9
Q ss_pred ceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCC-CCCCCCCccch---HHHHHHhcCceeEeeCHHHHHHHHcc
Q 008028 229 DVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPR-YDKPVKGRKIN---WMKAGILESDRVLTVSPHYAKELISG 303 (580)
Q Consensus 229 DvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~-~~~~~~~~~~~---~~~~~~~~ad~vi~vS~~~~~~l~~~ 303 (580)
| +|..||+|..++|.+++... ...++ |.+|- +.+....+.+. .+-.++..||.|-+.+..+++++.+.
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~ 275 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSC 275 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHH
Confidence 5 89999999999999998763 45577 66663 22222223222 33456779999999999999998864
Q ss_pred ccC--Ccchhh------h---hhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCc
Q 008028 304 EEK--GVELDN------I---IRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIP 372 (580)
Q Consensus 304 ~~~--g~~~~~------~---~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~ 372 (580)
+.+ |.+.+. + -+..+|.+.|-|||...+...... ......-+.++++++- ++..
T Consensus 276 ~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~------------~~~~~~~~~l~~~~~~---~~~~ 340 (854)
T PLN02205 276 CSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL------------PETEAKVKELIKQFCD---QDRI 340 (854)
T ss_pred HHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC------------hhHHHHHHHHHHHhcc---CCCE
Confidence 332 222111 0 023367788889998776443211 0001112345555542 2457
Q ss_pred EEEEEccCccccCHHHHHHHHhhhcC------CCeEEEEEecCC-------hhhHHHHHHHH----HHCCC----CeeEe
Q 008028 373 LIGFIGRLEEQKGSDILAQAIPKFMG------GNVQIVVLGTGK-------KPMEQQIEQLE----IICPE----KARGI 431 (580)
Q Consensus 373 ~i~f~Grl~~~Kg~~~ll~a~~~l~~------~~v~lii~G~g~-------~~~~~~i~~l~----~~~~~----~v~~~ 431 (580)
+|+-+.|++..||+..=+.|+++|.+ .++.|+-+.... .+++.++.++. .+++. -|.++
T Consensus 341 ~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~ 420 (854)
T PLN02205 341 MLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLI 420 (854)
T ss_pred EEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEE
Confidence 99999999999999999999999865 366777665422 23444444444 34542 13333
Q ss_pred -ccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCC-------------------ceEEcCCCCcceeEecCceeE
Q 008028 432 -TKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGT-------------------VPIVASTGGLFDTVKEGITGF 491 (580)
Q Consensus 432 -~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~-------------------PvI~s~~gg~~e~i~~~~~G~ 491 (580)
-.++.++.-.+|+.||+++++|..++.-++..|+.+|.. ++|.|.-.|....+. ..+
T Consensus 421 ~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai 497 (854)
T PLN02205 421 DAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAI 497 (854)
T ss_pred ecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC---cCe
Confidence 334556666799999999999999999999999999843 377777766666663 134
Q ss_pred EEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHH-HHhcCCchHHHHHHHHHHHHHH
Q 008028 492 QMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNC-MALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 492 ~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~-~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
. |.|.|.+++|++|.++|.....++...+.+.. ....++....++.++.-+....
T Consensus 498 ~----------VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~ 553 (854)
T PLN02205 498 R----------VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC 553 (854)
T ss_pred E----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 4 49999999999999999984333322222211 3356777777887777766653
No 108
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.27 E-value=2.5e-09 Score=113.62 Aligned_cols=291 Identities=19% Similarity=0.206 Sum_probs=193.1
Q ss_pred CceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCC-CCCCCCccchH---HHHHHhcCceeEeeCHHHHHHHHc
Q 008028 228 EDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRY-DKPVKGRKINW---MKAGILESDRVLTVSPHYAKELIS 302 (580)
Q Consensus 228 pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~-~~~~~~~~~~~---~~~~~~~ad~vi~vS~~~~~~l~~ 302 (580)
++.+|..||+|..++|.+++.... +.++ |.+|-. .+....+.+.| +..++..||.|-+.++.+++.+.+
T Consensus 147 ~gDiIWVhDYhL~L~P~mlR~~~~------~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~ 220 (486)
T COG0380 147 PGDIIWVHDYHLLLVPQMLRERIP------DAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLD 220 (486)
T ss_pred CCCEEEEEechhhhhHHHHHHhCC------CceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHH
Confidence 333999999999999999988743 4466 666632 22222222222 244667899999999999998875
Q ss_pred cccCCcc----hhhhh-----hcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcE
Q 008028 303 GEEKGVE----LDNII-----RKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPL 373 (580)
Q Consensus 303 ~~~~g~~----~~~~~-----~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~ 373 (580)
.+..-.. .+... +..++..+|-|+|+..+........ + ..--..+++.++ .+..+
T Consensus 221 ~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~--------v----~~~~~el~~~~~----~~~ki 284 (486)
T COG0380 221 LCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPS--------V----QEKVLELKAELG----RNKKL 284 (486)
T ss_pred HHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCc--------h----hhHHHHHHHHhc----CCceE
Confidence 4332110 00000 1136788899999887754322100 0 001223344443 23678
Q ss_pred EEEEccCccccCHHHHHHHHhhhcC------CCeEEEEEecCC----h---hhHHHHHHH----HHHCCC----CeeEe-
Q 008028 374 IGFIGRLEEQKGSDILAQAIPKFMG------GNVQIVVLGTGK----K---PMEQQIEQL----EIICPE----KARGI- 431 (580)
Q Consensus 374 i~f~Grl~~~Kg~~~ll~a~~~l~~------~~v~lii~G~g~----~---~~~~~i~~l----~~~~~~----~v~~~- 431 (580)
|+-+-|++.-||+..-+.|+++|.. .++.++-++... + .+..+++++ ..+++. -|.++
T Consensus 285 ivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~ 364 (486)
T COG0380 285 IVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLH 364 (486)
T ss_pred EEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEe
Confidence 9999999999999999999999975 377888777743 2 244444444 334442 12222
Q ss_pred ccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHc----CCceEEcCCCCcceeEecCceeEEEeecccccccCCccc
Q 008028 432 TKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRY----GTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLAD 507 (580)
Q Consensus 432 ~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~----G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d 507 (580)
-..+.++...++..+|+++++|..++..++..|+.+| +.++|.|...|....+.+ .+++ +|.|
T Consensus 365 ~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliV----------NP~d 431 (486)
T COG0380 365 RDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIV----------NPWD 431 (486)
T ss_pred ccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeE----------CCCC
Confidence 2246677778999999999999999999999999998 456999998888887765 4554 9999
Q ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHHHH--hcCCchHHHHHHHHHHHH
Q 008028 508 VAAIAKHVNRAVATYGTPALKEMIQNCMA--LDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 508 ~~~la~~l~~ll~~~~~~~~~~~~~~~~~--~~fs~~~~a~~~~~~~~~ 554 (580)
.+++|++|.++|... .+++.+..+..+. ..++..+.+..+++.+..
T Consensus 432 ~~~va~ai~~AL~m~-~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 432 TKEVADAIKRALTMS-LEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 999999999999973 3444444444333 356666666666665544
No 109
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.13 E-value=2.4e-10 Score=106.30 Aligned_cols=162 Identities=20% Similarity=0.154 Sum_probs=85.0
Q ss_pred eecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEEEecCc
Q 008028 91 GAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRVFVDHP 170 (580)
Q Consensus 91 s~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~ 170 (580)
+..+.+. .||.+.++.+|+++|+++||+|+++++......... .... . ..
T Consensus 4 ~~~~~~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~---------------~~~~---------~--~~-- 53 (177)
T PF13439_consen 4 TNIFLPN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE---------------LVKI---------F--VK-- 53 (177)
T ss_dssp ECC-TTS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST---------------EEEE----------------
T ss_pred EEecCCC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh---------------ccce---------e--ee--
Confidence 3344555 699999999999999999999999998754322210 0000 0 00
Q ss_pred cchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHHHHHhh
Q 008028 171 VFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCYLKFMY 250 (580)
Q Consensus 171 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~l~~~~ 250 (580)
..+. ................+.++.. +|| |+|+|.+...........
T Consensus 54 ------------~~~~------~~~~~~~~~~~~~~~~~~i~~~------------~~D-iVh~~~~~~~~~~~~~~~-- 100 (177)
T PF13439_consen 54 ------------IPYP------IRKRFLRSFFFMRRLRRLIKKE------------KPD-IVHIHGPPAFWIALLACR-- 100 (177)
T ss_dssp ------------TT-S------STSS--HHHHHHHHHHHHHHHH------------T-S-EEECCTTHCCCHHHHHHH--
T ss_pred ------------eecc------cccccchhHHHHHHHHHHHHHc------------CCC-eEEecccchhHHHHHhcc--
Confidence 0000 0111112222334444555444 489 779997766554433221
Q ss_pred hccCccccceE-EEcCCCCC------CCCCc----cchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCe
Q 008028 251 QSKGIHKNAKR-LCRPRYDK------PVKGR----KINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGI 319 (580)
Q Consensus 251 ~~~gi~~~~~~-~~l~~~~~------~~~~~----~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i 319 (580)
..++ ++.|+... ..... ....++...+.+|.++++|+.+++++.+ +|++.+ ++
T Consensus 101 -------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~---~~~~~~------ki 164 (177)
T PF13439_consen 101 -------KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK---FGIPPE------KI 164 (177)
T ss_dssp -------CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH---HT--SS-------E
T ss_pred -------CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH---hCCccc------CC
Confidence 2233 55554331 11111 1122344567899999999999999997 455544 89
Q ss_pred eEecCCCCCCCc
Q 008028 320 SGIVNGMDVQEW 331 (580)
Q Consensus 320 ~~I~NGvd~~~~ 331 (580)
.+|+||+|.+.|
T Consensus 165 ~vI~ngid~~~F 176 (177)
T PF13439_consen 165 HVIYNGIDTDRF 176 (177)
T ss_dssp EE----B-CCCH
T ss_pred EEEECCccHHHc
Confidence 999999999876
No 110
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.05 E-value=1.4e-07 Score=98.97 Aligned_cols=328 Identities=13% Similarity=0.091 Sum_probs=169.9
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEEEecCccchhhhccC
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRVFVDHPVFLEKVWGK 179 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~ 179 (580)
+||.-.=+..++++|.+.||+|..++..+.-..+ .. ...|++++.+....+..+
T Consensus 11 TGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~--------------------l~--~~~g~~~~~~~~~~l~~~---- 64 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKT--------------------II--EKENIPYYSISSGKLRRY---- 64 (352)
T ss_pred cHHHHHHHHHHHHHHHhCCCEEEEEECCCccccc--------------------cC--cccCCcEEEEeccCcCCC----
Confidence 6777777778999999999999999976521111 00 011344444432111000
Q ss_pred CCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHHHHHhhhccCccccc
Q 008028 180 TGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNA 259 (580)
Q Consensus 180 ~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~ 259 (580)
....+......+..+.+++++.++. ++|| |++.+....++.+++...+.+.+-+
T Consensus 65 ------------~~~~~~~~~~~~~~~~~~~~~i~~~---------~kPd-vvi~~Ggy~s~p~~~aa~~~~~p~~---- 118 (352)
T PRK12446 65 ------------FDLKNIKDPFLVMKGVMDAYVRIRK---------LKPD-VIFSKGGFVSVPVVIGGWLNRVPVL---- 118 (352)
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEecCchhhHHHHHHHHHcCCCEE----
Confidence 0001122222334445555544432 2799 7777766666666666665433211
Q ss_pred eEEEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCcccc
Q 008028 260 KRLCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYI 339 (580)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l 339 (580)
+|..+. .. .. --+...+.++.+++.-+...+.+ + +.++.++-|.|........
T Consensus 119 ----i~e~n~-~~-g~--~nr~~~~~a~~v~~~f~~~~~~~--------~------~~k~~~tG~Pvr~~~~~~~----- 171 (352)
T PRK12446 119 ----LHESDM-TP-GL--ANKIALRFASKIFVTFEEAAKHL--------P------KEKVIYTGSPVREEVLKGN----- 171 (352)
T ss_pred ----EECCCC-Cc-cH--HHHHHHHhhCEEEEEccchhhhC--------C------CCCeEEECCcCCccccccc-----
Confidence 111111 11 11 12456778898877554322222 1 1266666666654332111
Q ss_pred ccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccCHH-HHHHHHhhhcCCCeEEEEE-ecCChhhHHHH
Q 008028 340 NVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKGSD-ILAQAIPKFMGGNVQIVVL-GTGKKPMEQQI 417 (580)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg~~-~ll~a~~~l~~~~v~lii~-G~g~~~~~~~i 417 (580)
++..++.++++ ++.++|+..|.=.-.+.+. .+.+++..+. .++++++. |.. .+++.+
T Consensus 172 ----------------~~~~~~~~~l~--~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~--~~~~~~ 230 (352)
T PRK12446 172 ----------------REKGLAFLGFS--RKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKG--NLDDSL 230 (352)
T ss_pred ----------------chHHHHhcCCC--CCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCc--hHHHHH
Confidence 23445667764 3456666665432234443 3344455443 34776654 433 244433
Q ss_pred HHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC---------cceeEecCc
Q 008028 418 EQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG---------LFDTVKEGI 488 (580)
Q Consensus 418 ~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg---------~~e~i~~~~ 488 (580)
.. .. ++.. ..|..+.+..+|+.||++|.- +-++++.|++++|+|.|.-.... ..+.+.+..
T Consensus 231 ~~----~~-~~~~-~~f~~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g 300 (352)
T PRK12446 231 QN----KE-GYRQ-FEYVHGELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQG 300 (352)
T ss_pred hh----cC-CcEE-ecchhhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCC
Confidence 32 11 2222 244333455699999998843 56889999999999988774321 111223334
Q ss_pred eeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 008028 489 TGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKML 552 (580)
Q Consensus 489 ~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~ 552 (580)
.+..+. . +..+++.+++++.+++++ ++.+.+. ...+.....+++..+.+
T Consensus 301 ~~~~l~---~-----~~~~~~~l~~~l~~ll~~--~~~~~~~-----~~~~~~~~aa~~i~~~i 349 (352)
T PRK12446 301 YASVLY---E-----EDVTVNSLIKHVEELSHN--NEKYKTA-----LKKYNGKEAIQTIIDHI 349 (352)
T ss_pred CEEEcc---h-----hcCCHHHHHHHHHHHHcC--HHHHHHH-----HHHcCCCCHHHHHHHHH
Confidence 444430 0 233678999999999875 4444322 12344445555554443
No 111
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.01 E-value=7.8e-10 Score=101.04 Aligned_cols=154 Identities=23% Similarity=0.161 Sum_probs=79.9
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEEEecCccchhhhccCC
Q 008028 101 GGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRVFVDHPVFLEKVWGKT 180 (580)
Q Consensus 101 GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~ 180 (580)
||++.++.+|+++|+++||+|+++++..+...+. ....++.++.+..+....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~------ 52 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPW------ 52 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSS------
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccch------
Confidence 8999999999999999999999999875433220 112355555443322110
Q ss_pred CCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHHHHHHHhhhccCccccce
Q 008028 181 GSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAK 260 (580)
Q Consensus 181 ~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~ 260 (580)
.+. ... +.......+.. .. .+|| |+|+|.+..++++..++... ..+
T Consensus 53 --~~~-----------~~~---~~~~~~~~l~~-~~---------~~~D-vv~~~~~~~~~~~~~~~~~~-------~~p 98 (160)
T PF13579_consen 53 --PLR-----------LLR---FLRRLRRLLAA-RR---------ERPD-VVHAHSPTAGLVAALARRRR-------GIP 98 (160)
T ss_dssp --GGG-----------HCC---HHHHHHHHCHH-CT------------S-EEEEEHHHHHHHHHHHHHHH-------T--
T ss_pred --hhh-----------hHH---HHHHHHHHHhh-hc---------cCCe-EEEecccchhHHHHHHHHcc-------CCc
Confidence 000 000 11122222211 11 1599 89999877666666665332 344
Q ss_pred E-EEcCCCCCCCCC----cc-chHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCC
Q 008028 261 R-LCRPRYDKPVKG----RK-INWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNG 325 (580)
Q Consensus 261 ~-~~l~~~~~~~~~----~~-~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NG 325 (580)
+ +++|+....... .. ..+++..++.||.++++|+..++.+.+ .|++.+ ++.+||||
T Consensus 99 ~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~~~~------ri~vipnG 160 (160)
T PF13579_consen 99 LVVTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR---YGVPPD------RIHVIPNG 160 (160)
T ss_dssp EEEE-SS-T------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH---H---GG------GEEE----
T ss_pred EEEEECCCchhhccchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCCCCC------cEEEeCcC
Confidence 5 677754322111 11 134577888999999999999999997 677766 99999998
No 112
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.00 E-value=1.2e-09 Score=91.23 Aligned_cols=89 Identities=19% Similarity=0.275 Sum_probs=79.0
Q ss_pred EEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHH
Q 008028 448 FMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPAL 527 (580)
Q Consensus 448 i~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 527 (580)
+.|+|++.++++...+|+|+||+|+|++..+++.+++.++..++.+ + |++++.++|..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~----------~--~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY----------N--DPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE----------C--CHHHHHHHHHHHHCC--HHHH
Confidence 4688998999999999999999999999999999999999899987 4 999999999999997 7777
Q ss_pred HHHHHHH---HHhcCCchHHHHHHHH
Q 008028 528 KEMIQNC---MALDLSWKEPARLWEK 550 (580)
Q Consensus 528 ~~~~~~~---~~~~fs~~~~a~~~~~ 550 (580)
.++++++ +.++|||+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 7777766 5579999999998863
No 113
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.99 E-value=1.4e-08 Score=108.75 Aligned_cols=177 Identities=7% Similarity=0.020 Sum_probs=130.7
Q ss_pred hcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHc
Q 008028 284 LESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQL 363 (580)
Q Consensus 284 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 363 (580)
.+.|.|++.++...+.+.+.... ..++.+||-|+-.+ ....
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~---~~~~--------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP---FKKD--------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe---eccc---------------------------
Confidence 46788999998877777753221 12556666665421 1110
Q ss_pred CCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHH
Q 008028 364 GLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHK 441 (580)
Q Consensus 364 glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~ 441 (580)
+....-++.++. +..|+++++|.+ |+++|.| |-+.+ +...+.++ .++ .+++.+..+....+..
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y-~nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKY-DNVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-Hhc-CCcEEECCcChHHHHH
Confidence 012234555552 889999999865 8999999 76653 55788888 667 5677778888867778
Q ss_pred HHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCC-CCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHH
Q 008028 442 IIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAST-GGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 442 ~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~-gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
++..||++|.+|..|+++++++||+..|+|+++.+. -|..+++.+ |.++ +.+++++++++|.++|.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999994 455566655 7776 99999999999999999
Q ss_pred hcChhHHHH
Q 008028 521 TYGTPALKE 529 (580)
Q Consensus 521 ~~~~~~~~~ 529 (580)
+ ++.+.+
T Consensus 411 d--~~~~~~ 417 (438)
T TIGR02919 411 D--PNQFRE 417 (438)
T ss_pred C--HHHHHH
Confidence 7 444443
No 114
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.97 E-value=9.4e-07 Score=92.17 Aligned_cols=342 Identities=15% Similarity=0.113 Sum_probs=184.2
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCe-EEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCee
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHR-VMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVD 163 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~-V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (580)
|+|++.... +||.-..+..++++|.++|++ |.++...++ .........+++
T Consensus 1 ~~ivl~~gG------TGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~----------------------~e~~l~~~~~~~ 52 (357)
T COG0707 1 KKIVLTAGG------TGGHVFPALALAEELAKRGWEQVIVLGTGDG----------------------LEAFLVKQYGIE 52 (357)
T ss_pred CeEEEEeCC------CccchhHHHHHHHHHHhhCccEEEEeccccc----------------------ceeeeccccCce
Confidence 355555543 789888999999999999995 555544321 011111122566
Q ss_pred EEEecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCccchHH
Q 008028 164 RVFVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLP 243 (580)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~~~l~ 243 (580)
++.++...+..+ .. +. .......++.+..++.+.+... +||+|+-+. ++.+..+
T Consensus 53 ~~~I~~~~~~~~-------~~--------~~-~~~~~~~~~~~~~~a~~il~~~---------kPd~vig~G-gyvs~P~ 106 (357)
T COG0707 53 FELIPSGGLRRK-------GS--------LK-LLKAPFKLLKGVLQARKILKKL---------KPDVVIGTG-GYVSGPV 106 (357)
T ss_pred EEEEeccccccc-------Cc--------HH-HHHHHHHHHHHHHHHHHHHHHc---------CCCEEEecC-CccccHH
Confidence 666655433221 01 11 3333444555555555555432 799777665 4444455
Q ss_pred HHHHHhhhccCccccceEEEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEec
Q 008028 244 CYLKFMYQSKGIHKNAKRLCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIV 323 (580)
Q Consensus 244 ~~l~~~~~~~gi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~ 323 (580)
.+.+...+ .++ .+|..+.. .... -+...+.++.|.+.-+. .. .+++ +.++.+.-
T Consensus 107 ~~Aa~~~~-------iPv-~ihEqn~~--~G~a--nk~~~~~a~~V~~~f~~----~~----~~~~------~~~~~~tG 160 (357)
T COG0707 107 GIAAKLLG-------IPV-IIHEQNAV--PGLA--NKILSKFAKKVASAFPK----LE----AGVK------PENVVVTG 160 (357)
T ss_pred HHHHHhCC-------CCE-EEEecCCC--cchh--HHHhHHhhceeeecccc----cc----ccCC------CCceEEec
Confidence 55555432 122 22211111 1111 14456677877665554 11 1222 22566777
Q ss_pred CCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEcc-CccccCHHHHHHHHhhhcCCCeE
Q 008028 324 NGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGR-LEEQKGSDILAQAIPKFMGGNVQ 402 (580)
Q Consensus 324 NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Gr-l~~~Kg~~~ll~a~~~l~~~~v~ 402 (580)
|.|..+... .. ...++..... +.++|+.+|. ....+=-+.+-+++..+. ++++
T Consensus 161 ~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~-~~~~ 214 (357)
T COG0707 161 IPVRPEFEE-LP--------------------AAEVRKDGRL----DKKTILVTGGSQGAKALNDLVPEALAKLA-NRIQ 214 (357)
T ss_pred CcccHHhhc-cc--------------------hhhhhhhccC----CCcEEEEECCcchhHHHHHHHHHHHHHhh-hCeE
Confidence 777655443 11 1122222111 4566666665 444442333333334443 3677
Q ss_pred EEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcc-
Q 008028 403 IVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLF- 481 (580)
Q Consensus 403 lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~- 481 (580)
++...+... +++....+. +... .....|..++. .+|+.||+++. + +=++++-|..++|+|.|.-..+...
T Consensus 215 v~~~~G~~~-~~~~~~~~~-~~~~--~~v~~f~~dm~-~~~~~ADLvIs--R--aGa~Ti~E~~a~g~P~IliP~p~~~~ 285 (357)
T COG0707 215 VIHQTGKND-LEELKSAYN-ELGV--VRVLPFIDDMA-ALLAAADLVIS--R--AGALTIAELLALGVPAILVPYPPGAD 285 (357)
T ss_pred EEEEcCcch-HHHHHHHHh-hcCc--EEEeeHHhhHH-HHHHhccEEEe--C--CcccHHHHHHHhCCCEEEeCCCCCcc
Confidence 666554332 333333333 2222 33445555544 59999999993 3 4578999999999998888765541
Q ss_pred -------eeEecCceeEEEeecccccccCCcc--cHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 008028 482 -------DTVKEGITGFQMRSFHVECDRVDLA--DVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKML 552 (580)
Q Consensus 482 -------e~i~~~~~G~~~~~~~~~~~~v~~~--d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~ 552 (580)
..+.+...+.++ +.. +++.+.+.|.+++.+ ++.+.+|..++. .+.-...+++..+..
T Consensus 286 ~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~~--~~~l~~m~~~a~--~~~~p~aa~~i~~~~ 351 (357)
T COG0707 286 GHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLSN--PEKLKAMAENAK--KLGKPDAAERIADLL 351 (357)
T ss_pred chHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHH--hcCCCCHHHHHHHHH
Confidence 123344556665 444 488999999999997 677778877652 233334455555544
Q ss_pred HHH
Q 008028 553 LSM 555 (580)
Q Consensus 553 ~~l 555 (580)
...
T Consensus 352 ~~~ 354 (357)
T COG0707 352 LAL 354 (357)
T ss_pred HHH
Confidence 433
No 115
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.86 E-value=3.6e-09 Score=107.72 Aligned_cols=105 Identities=18% Similarity=0.284 Sum_probs=74.6
Q ss_pred HHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCccee----EecCc-eeEEEe--ecccccccCCcccHHHHHH
Q 008028 441 KIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDT----VKEGI-TGFQMR--SFHVECDRVDLADVAAIAK 513 (580)
Q Consensus 441 ~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~----i~~~~-~G~~~~--~~~~~~~~v~~~d~~~la~ 513 (580)
+++.+|.+.++||.+|++|.+..|.-.+|+|-|+|+..|..-. +.+.. .|+-+= .|.- ..++++++++
T Consensus 496 eFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks-----~deSv~qL~~ 570 (692)
T KOG3742|consen 496 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKS-----PDESVQQLAS 570 (692)
T ss_pred HHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCC-----hhhHHHHHHH
Confidence 6899999999999999999999999999999999998885544 43322 333321 2222 4566788888
Q ss_pred HHHHHHHhcChhHHHHHHHH-H---HHhcCCchHHHHHHHHHHH
Q 008028 514 HVNRAVATYGTPALKEMIQN-C---MALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 514 ~l~~ll~~~~~~~~~~~~~~-~---~~~~fs~~~~a~~~~~~~~ 553 (580)
.|++.... .++++++++ . +..-.+|+.+...|.+.=.
T Consensus 571 ~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~ 611 (692)
T KOG3742|consen 571 FMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARH 611 (692)
T ss_pred HHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHH
Confidence 88777664 233333332 2 4456899999988877543
No 116
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.63 E-value=4.6e-06 Score=87.96 Aligned_cols=237 Identities=14% Similarity=0.113 Sum_probs=141.6
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceEEEcCCCCCCCCCccchHHHHH-HhcCceeEeeCHHHHHHHHcccc
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCRPRYDKPVKGRKINWMKAG-ILESDRVLTVSPHYAKELISGEE 305 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~ad~vi~vS~~~~~~l~~~~~ 305 (580)
+||+|+..-|..+.+.+++.....+ .++..+++...... ..-...+.+ -+.|+..++.++...+.+.+
T Consensus 93 ~Pd~vlv~GD~~~~la~alaA~~~~-------IPv~HveaG~rs~~-~~eE~~r~~i~~la~l~f~~t~~~~~~L~~--- 161 (365)
T TIGR03568 93 KPDLVVVLGDRFEMLAAAIAAALLN-------IPIAHIHGGEVTEG-AIDESIRHAITKLSHLHFVATEEYRQRVIQ--- 161 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhC-------CcEEEEECCccCCC-CchHHHHHHHHHHHhhccCCCHHHHHHHHH---
Confidence 6997777777888877777665543 33322222211111 111223333 34678999999999998886
Q ss_pred CCcchhhhhhcCCeeEecC-CCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEcc-----
Q 008028 306 KGVELDNIIRKTGISGIVN-GMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGR----- 379 (580)
Q Consensus 306 ~g~~~~~~~~~~~i~~I~N-Gvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Gr----- 379 (580)
-|.+.+ +|.++-| ++|.-.+.... .++.+.+++|++.+. ..+++.+-+
T Consensus 162 eg~~~~------~i~~tG~~~iD~l~~~~~~-------------------~~~~~~~~lgl~~~~-~~vlvt~Hp~~~~~ 215 (365)
T TIGR03568 162 MGEDPD------RVFNVGSPGLDNILSLDLL-------------------SKEELEEKLGIDLDK-PYALVTFHPVTLEK 215 (365)
T ss_pred cCCCCC------cEEEECCcHHHHHHhhhcc-------------------CHHHHHHHhCCCCCC-CEEEEEeCCCcccc
Confidence 566544 6766655 45543222111 145667778875322 232233333
Q ss_pred CccccCHHHHHHHHhhhcCCCeEEEEE-ec-CChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCC
Q 008028 380 LEEQKGSDILAQAIPKFMGGNVQIVVL-GT-GKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEP 457 (580)
Q Consensus 380 l~~~Kg~~~ll~a~~~l~~~~v~lii~-G~-g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~ 457 (580)
....+.+..+++++.++ ..++.+++- ++ +.+...+.++++... ..++.......-.....+++.||+++-.|
T Consensus 216 ~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~~~~~l~Ll~~a~~vitdS---- 289 (365)
T TIGR03568 216 ESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLGQERYLSLLKNADAVIGNS---- 289 (365)
T ss_pred cCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCChHHHHHHHHhCCEEEEcC----
Confidence 22334466666666555 224533332 22 233456666666432 24577777777777778999999999443
Q ss_pred ccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHH
Q 008028 458 CGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 458 ~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
.|.. .||.++|+|+|. .+...+.+..|.+.+.+ ..|++++.+++.++++
T Consensus 290 Sggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 290 SSGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hhHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CCCHHHHHHHHHHHhC
Confidence 2444 899999999994 45677777777777754 4578999999988543
No 117
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.35 E-value=1.1e-05 Score=75.83 Aligned_cols=174 Identities=18% Similarity=0.156 Sum_probs=102.0
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||+++.+--.|.. .||.++++.+|+..|+++||+|+|.|..... ... .....|++++
T Consensus 3 kIaIiGtrGIPa~-YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~-~~~---------------------~~~y~gv~l~ 59 (185)
T PF09314_consen 3 KIAIIGTRGIPAR-YGGFETFVEELAPRLVSKGIDVTVYCRSDYY-PYK---------------------EFEYNGVRLV 59 (185)
T ss_pred eEEEEeCCCCCcc-cCcHHHHHHHHHHHHhcCCceEEEEEccCCC-CCC---------------------CcccCCeEEE
Confidence 6999999877764 8999999999999999999999999985321 110 1123466766
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCc-cchHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWH-TALLPC 244 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~-~~~l~~ 244 (580)
.+..+.. | ....+.....++..+++....+ +.+.| |++.+... .+++..
T Consensus 60 ~i~~~~~--------g--------------~~~si~yd~~sl~~al~~~~~~-------~~~~~-ii~ilg~~~g~~~~~ 109 (185)
T PF09314_consen 60 YIPAPKN--------G--------------SAESIIYDFLSLLHALRFIKQD-------KIKYD-IILILGYGIGPFFLP 109 (185)
T ss_pred EeCCCCC--------C--------------chHHHHHHHHHHHHHHHHHhhc-------cccCC-EEEEEcCCccHHHHH
Confidence 6654321 0 0112223333444444322111 11367 66666444 344444
Q ss_pred HHHHhhhccCccccceE-EEcCCC-CCCCCCc------cchHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhc
Q 008028 245 YLKFMYQSKGIHKNAKR-LCRPRY-DKPVKGR------KINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRK 316 (580)
Q Consensus 245 ~l~~~~~~~gi~~~~~~-~~l~~~-~~~~~~~------~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~ 316 (580)
+++.+. .. ..++ +..+|. +++.++. ....++.+.+.||.+++-|+...+++.+. ++.
T Consensus 110 ~~r~~~-~~----g~~v~vN~DGlEWkR~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~--y~~-------- 174 (185)
T PF09314_consen 110 FLRKLR-KK----GGKVVVNMDGLEWKRAKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIKER--YGR-------- 174 (185)
T ss_pred HHHhhh-hc----CCcEEECCCcchhhhhhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHH--cCC--------
Confidence 444331 11 1234 344432 1222211 11224667789999999999999999973 331
Q ss_pred CCeeEecCCCC
Q 008028 317 TGISGIVNGMD 327 (580)
Q Consensus 317 ~~i~~I~NGvd 327 (580)
.+.++|++|.|
T Consensus 175 ~~s~~IaYGad 185 (185)
T PF09314_consen 175 KKSTFIAYGAD 185 (185)
T ss_pred CCcEEecCCCC
Confidence 17899999986
No 118
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.27 E-value=0.00017 Score=77.02 Aligned_cols=192 Identities=14% Similarity=0.037 Sum_probs=113.0
Q ss_pred HHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHH
Q 008028 280 KAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEAL 359 (580)
Q Consensus 280 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 359 (580)
+...+.|+.+++..+...+.+.+ .|+ ++.++-|.+=.. ..+.. +
T Consensus 155 ~l~~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~-l~~~~--------------------~--- 198 (396)
T TIGR03492 155 LMRSRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDG-LEPPE--------------------R--- 198 (396)
T ss_pred HhhchhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhc-Ccccc--------------------c---
Confidence 33446899999998888888775 333 566666665221 11110 0
Q ss_pred HHHcCCCCCCCCc-EEEEEccC--ccccCHHHHHHHHhhhcC-CCeEEEEEecCChhhHHHHHHHHHHCCC---------
Q 008028 360 QSQLGLPVDRNIP-LIGFIGRL--EEQKGSDILAQAIPKFMG-GNVQIVVLGTGKKPMEQQIEQLEIICPE--------- 426 (580)
Q Consensus 360 ~~~~glp~~~~~~-~i~f~Grl--~~~Kg~~~ll~a~~~l~~-~~v~lii~G~g~~~~~~~i~~l~~~~~~--------- 426 (580)
. +++ ++.+ ++++.|.- +..+++..++++++++.+ +++++++.-.+.... ..+++...+.+.
T Consensus 199 -~--~l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~ 272 (396)
T TIGR03492 199 -K--PLL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQ 272 (396)
T ss_pred -c--ccC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCcccc
Confidence 0 232 2223 45555544 335678899999999854 578887654232212 223332222111
Q ss_pred -------CeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCccee---EecC----ceeEE
Q 008028 427 -------KARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDT---VKEG----ITGFQ 492 (580)
Q Consensus 427 -------~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~---i~~~----~~G~~ 492 (580)
.+.... |. .....+++.||++|.. .|++..|++++|+|+|.....+.... .... ..+..
T Consensus 273 ~~~~~~~~~~v~~-~~-~~~~~~l~~ADlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~ 345 (396)
T TIGR03492 273 TSLFQKGTLEVLL-GR-GAFAEILHWADLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVF 345 (396)
T ss_pred chhhccCceEEEe-ch-HhHHHHHHhCCEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEe
Confidence 122222 32 2245699999999976 47888999999999999874332211 1110 12232
Q ss_pred EeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHH
Q 008028 493 MRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQ 532 (580)
Q Consensus 493 ~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~ 532 (580)
+ ...+++.+++++.+++++ ++.+.+|.+
T Consensus 346 l----------~~~~~~~l~~~l~~ll~d--~~~~~~~~~ 373 (396)
T TIGR03492 346 L----------ASKNPEQAAQVVRQLLAD--PELLERCRR 373 (396)
T ss_pred c----------CCCCHHHHHHHHHHHHcC--HHHHHHHHH
Confidence 2 567789999999999986 666666653
No 119
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.17 E-value=0.00014 Score=77.61 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=78.2
Q ss_pred CCcEEEEEccCcc---ccCHHHHHHHHhhhcCCCeEEE-EEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhc
Q 008028 370 NIPLIGFIGRLEE---QKGSDILAQAIPKFMGGNVQIV-VLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAG 445 (580)
Q Consensus 370 ~~~~i~f~Grl~~---~Kg~~~ll~a~~~l~~~~v~li-i~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 445 (580)
+.++++..|.... .+-...+++++..+ +++++ .+|..... . ...++++......+.. .++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~~---~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPHD---WLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCHH---HHhhh
Confidence 3356777787743 34556666776654 55644 44544311 1 2345566665554322 37899
Q ss_pred CCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEecCceeEEEeecccccccCCcc--cHHHHHHHHHHHH
Q 008028 446 ADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKEGITGFQMRSFHVECDRVDLA--DVAAIAKHVNRAV 519 (580)
Q Consensus 446 aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~~~~~~~~~~~~v~~~--d~~~la~~l~~ll 519 (580)
||++|.- +-..+..||+++|+|+|+....+ +.+.+.+.+.|..+ +.. +.+.+++++.+++
T Consensus 305 ~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHh
Confidence 9999932 33478999999999999887654 22233344556654 333 6899999999998
Q ss_pred Hh
Q 008028 520 AT 521 (580)
Q Consensus 520 ~~ 521 (580)
++
T Consensus 371 ~~ 372 (401)
T cd03784 371 DP 372 (401)
T ss_pred CH
Confidence 84
No 120
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.13 E-value=6.6e-05 Score=77.59 Aligned_cols=179 Identities=17% Similarity=0.130 Sum_probs=100.4
Q ss_pred HHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEe-cCCCCCCCcCCCCccccccccCchhhhccchHHHHHH
Q 008028 281 AGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGI-VNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEAL 359 (580)
Q Consensus 281 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I-~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 359 (580)
..+-.||.+++.+-.-...+.+ +|.+ + .+. +||++.-.|...-.+ +..+
T Consensus 121 Lt~Pla~~i~~P~~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~P------------------d~~v 170 (335)
T PF04007_consen 121 LTLPLADVIITPEAIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKP------------------DPEV 170 (335)
T ss_pred eehhcCCeeECCcccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCC------------------ChhH
Confidence 3455899998877643444443 3432 1 344 788876555432111 3456
Q ss_pred HHHcCCCCCCCCcEEEEEccCccccC------HHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEecc
Q 008028 360 QSQLGLPVDRNIPLIGFIGRLEEQKG------SDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITK 433 (580)
Q Consensus 360 ~~~~glp~~~~~~~i~f~Grl~~~Kg------~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~ 433 (580)
.+++|+. +.++|+. |.++.+- -.++-+.+++|.+..-.++++-...+ .. ++..+++ +.....
T Consensus 171 l~~lg~~---~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-~~----~~~~~~~--~~i~~~ 238 (335)
T PF04007_consen 171 LKELGLD---DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-QR----ELFEKYG--VIIPPE 238 (335)
T ss_pred HHHcCCC---CCCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-hh----hHHhccC--ccccCC
Confidence 7788864 2345543 5544332 23344555666553333666654432 11 1222332 211111
Q ss_pred CChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC---cceeEecCceeEEEeecccccccCCcccHHH
Q 008028 434 FSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG---LFDTVKEGITGFQMRSFHVECDRVDLADVAA 510 (580)
Q Consensus 434 ~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg---~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~ 510 (580)
.-..+.++..||+++- +.|+...||...|+|.|.+..|- ..+.+. +.|.++ -..|+++
T Consensus 239 --~vd~~~Ll~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~----------~~~~~~e 299 (335)
T PF04007_consen 239 --PVDGLDLLYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLY----------HSTDPDE 299 (335)
T ss_pred --CCCHHHHHHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeE----------ecCCHHH
Confidence 1122358999999982 45889999999999999876542 223333 357776 7788998
Q ss_pred HHHHHHHHHH
Q 008028 511 IAKHVNRAVA 520 (580)
Q Consensus 511 la~~l~~ll~ 520 (580)
+.+.+.+.+.
T Consensus 300 i~~~v~~~~~ 309 (335)
T PF04007_consen 300 IVEYVRKNLG 309 (335)
T ss_pred HHHHHHHhhh
Confidence 8886666554
No 121
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.12 E-value=0.00019 Score=75.06 Aligned_cols=266 Identities=14% Similarity=0.117 Sum_probs=142.6
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceEEEcCCC----CCCCCCccchHHHHHH-hcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCRPRY----DKPVKGRKINWMKAGI-LESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~~~----~~~~~~~~~~~~~~~~-~~ad~vi~vS~~~~~~l~ 301 (580)
+||+|+..-|-.+++.++...... +.++..+++- +.. .+..-...|.++ +.||..++.++..++.+.
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~-------~ipv~HieaGlRs~d~~-~g~~de~~R~~i~~la~lhf~~t~~~~~~L~ 138 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYL-------NIPVAHIEAGLRSGDRT-EGMPDEINRHAIDKLAHLHFAPTEEARERLL 138 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHT-------T-EEEEES-----S-TT-SSTTHHHHHHHHHHH-SEEEESSHHHHHHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHh-------CCCEEEecCCCCccccC-CCCchhhhhhhhhhhhhhhccCCHHHHHHHH
Confidence 599777777888888878766654 3344333322 111 112223445545 489999999999999999
Q ss_pred ccccCCcchhhhhhcCCeeEecCC-CCCCCcCCCCccccccccCchhhhccchHHHHHH-HHHcCC-CCCCCCcEEEEEc
Q 008028 302 SGEEKGVELDNIIRKTGISGIVNG-MDVQEWNPSTDRYINVNYDATTVMNAKPLVKEAL-QSQLGL-PVDRNIPLIGFIG 378 (580)
Q Consensus 302 ~~~~~g~~~~~~~~~~~i~~I~NG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~gl-p~~~~~~~i~f~G 378 (580)
+ .|.+.+ +|.++-|- +|.-..... ...+.+ .. ++ ...++..+++..=
T Consensus 139 ~---~G~~~~------rI~~vG~~~~D~l~~~~~-------------------~~~~~~~~~--~i~~~~~~~~iLvt~H 188 (346)
T PF02350_consen 139 Q---EGEPPE------RIFVVGNPGIDALLQNKE-------------------EIEEKYKNS--GILQDAPKPYILVTLH 188 (346)
T ss_dssp H---TT--GG------GEEE---HHHHHHHHHHH-------------------TTCC-HHHH--HHHHCTTSEEEEEE-S
T ss_pred h---cCCCCC------eEEEEChHHHHHHHHhHH-------------------HHhhhhhhH--HHHhccCCCEEEEEeC
Confidence 7 688766 77777663 332111000 000001 00 11 0012333344443
Q ss_pred cCcc---ccCHHHHHHHHhhhcC-CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCC
Q 008028 379 RLEE---QKGSDILAQAIPKFMG-GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSR 454 (580)
Q Consensus 379 rl~~---~Kg~~~ll~a~~~l~~-~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~ 454 (580)
|.+. ......+.++++.+.+ .++++++.....+...+.+.+...++ .++.............+++.|+++|-.|
T Consensus 189 ~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~vvgdS- 266 (346)
T PF02350_consen 189 PVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLKNADLVVGDS- 266 (346)
T ss_dssp -CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHHHHESEEEESS-
T ss_pred cchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHHhcceEEEEcC-
Confidence 3322 3456677777777765 58999998886666666776666666 4788888777777778999999998554
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCC-cceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHH
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGG-LFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQN 533 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg-~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~ 533 (580)
|..+-||..+|+|+|.-...| ..+....+.+-+ + . .|.+++.+++.+++.. .+.+..+..
T Consensus 267 ----sGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v----------~-~~~~~I~~ai~~~l~~--~~~~~~~~~- 327 (346)
T PF02350_consen 267 ----SGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V----------G-TDPEAIIQAIEKALSD--KDFYRKLKN- 327 (346)
T ss_dssp ----HHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E----------T-SSHHHHHHHHHHHHH---HHHHHHHHC-
T ss_pred ----ccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e----------C-CCHHHHHHHHHHHHhC--hHHHHhhcc-
Confidence 544559999999999986444 444444444444 4 4 7899999999999985 334333321
Q ss_pred HHHhcCCchHHHHHHHHHH
Q 008028 534 CMALDLSWKEPARLWEKML 552 (580)
Q Consensus 534 ~~~~~fs~~~~a~~~~~~~ 552 (580)
...-|.-.+.+++..+++
T Consensus 328 -~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 328 -RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp -S--TT-SS-HHHHHHHHH
T ss_pred -CCCCCCCCcHHHHHHHhh
Confidence 112344344555555544
No 122
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.10 E-value=0.00024 Score=73.25 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=77.4
Q ss_pred CCcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEE
Q 008028 370 NIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFM 449 (580)
Q Consensus 370 ~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~ 449 (580)
...+++++|..+.. .++++++.+ ++.+++++|.... .....++. +..|.......+++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~----------~~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAA----------DPRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCcc----------cccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 44589999987666 667777776 4688888877631 01134455 4556655566799999999
Q ss_pred EecCCCCCccHH-HHHHHHcCCceEEcCCCCcceeEe------cCceeEEEeecccccccCCcccHHHHHHHHHH
Q 008028 450 LVPSRFEPCGLI-QLHAMRYGTVPIVASTGGLFDTVK------EGITGFQMRSFHVECDRVDLADVAAIAKHVNR 517 (580)
Q Consensus 450 l~ps~~E~~g~~-~lEAma~G~PvI~s~~gg~~e~i~------~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ 517 (580)
|.. .|.+ ++|++++|+|+++-...+..|-.. +.+.|..+ ..+..+++.+.+.|.+
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLER 316 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhc
Confidence 954 3544 999999999999988766444322 23344443 0023466777777765
No 123
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.07 E-value=0.00044 Score=70.20 Aligned_cols=96 Identities=13% Similarity=0.099 Sum_probs=67.9
Q ss_pred cEEEEEccCccccCHHHHHHHHhhhcCCCeEE-EEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEE
Q 008028 372 PLIGFIGRLEEQKGSDILAQAIPKFMGGNVQI-VVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFML 450 (580)
Q Consensus 372 ~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~l-ii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l 450 (580)
.++++.|...+.+....+++++.++. .++++ +|+|.+.+ ..+.++++....+ ++.. ..|. +.+..+|+.||+++
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~-~~~~l~~~~~~~~-~i~~-~~~~-~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNP-NLDELKKFAKEYP-NIIL-FIDV-ENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCc-CHHHHHHHHHhCC-CEEE-EeCH-HHHHHHHHHCCEEE
Confidence 47888998888777778888887763 34443 36677654 3456666665544 4543 3343 34556999999999
Q ss_pred ecCCCCCccHHHHHHHHcCCceEEcCC
Q 008028 451 VPSRFEPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 451 ~ps~~E~~g~~~lEAma~G~PvI~s~~ 477 (580)
.+ .|.+..|++++|+|+|+-..
T Consensus 247 s~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 GA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EC-----CchHHHHHHHcCCCEEEEEe
Confidence 73 67999999999999887654
No 124
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.99 E-value=0.00047 Score=71.05 Aligned_cols=196 Identities=16% Similarity=0.083 Sum_probs=118.5
Q ss_pred HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCC-CCCcCCCCccccccccCchhhhccchHHHH
Q 008028 279 MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMD-VQEWNPSTDRYINVNYDATTVMNAKPLVKE 357 (580)
Q Consensus 279 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 357 (580)
.....+.+|+++++=|.-.+.+.+ .|. +.++|-|.+- .-.+.+ +++
T Consensus 130 a~~i~~~~D~lLailPFE~~~y~k---~g~---------~~~yVGHpl~d~i~~~~---------------------~r~ 176 (381)
T COG0763 130 AVKIAKYVDHLLAILPFEPAFYDK---FGL---------PCTYVGHPLADEIPLLP---------------------DRE 176 (381)
T ss_pred HHHHHHHhhHeeeecCCCHHHHHh---cCC---------CeEEeCChhhhhccccc---------------------cHH
Confidence 344556899999999988888876 333 3455554432 111111 267
Q ss_pred HHHHHcCCCCCCCCcEEEEEc-cCcc-ccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEecc
Q 008028 358 ALQSQLGLPVDRNIPLIGFIG-RLEE-QKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITK 433 (580)
Q Consensus 358 ~~~~~~glp~~~~~~~i~f~G-rl~~-~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~ 433 (580)
.+|+++|++.+... +.+..| |-++ .+-...+++++++++. ++.++++---.. .++..+.+....... .....
T Consensus 177 ~ar~~l~~~~~~~~-lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~-~~~~~~~~~~~~~~~--~~~~~ 252 (381)
T COG0763 177 AAREKLGIDADEKT-LALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA-KYRRIIEEALKWEVA--GLSLI 252 (381)
T ss_pred HHHHHhCCCCCCCe-EEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH-HHHHHHHHHhhcccc--CceEE
Confidence 79999999765443 445555 5555 4557788899999874 789988866544 233333333322110 11122
Q ss_pred CChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC-CCCcceeEec-----C--------ceeEEEeecccc
Q 008028 434 FSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLFDTVKE-----G--------ITGFQMRSFHVE 499 (580)
Q Consensus 434 ~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~-~gg~~e~i~~-----~--------~~G~~~~~~~~~ 499 (580)
..+...+..+..||+.+.. +|++.+|+|.+|+|.|++- ...+.-.+.. . .+-.++.+|-.
T Consensus 253 ~~~~~~~~a~~~aD~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq- 326 (381)
T COG0763 253 LIDGEKRKAFAAADAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQ- 326 (381)
T ss_pred ecCchHHHHHHHhhHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHh-
Confidence 3345566789999998865 6999999999999977665 3322111110 0 00112222222
Q ss_pred cccCCcccHHHHHHHHHHHHHh
Q 008028 500 CDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 500 ~~~v~~~d~~~la~~l~~ll~~ 521 (580)
+.-.++.+++++..++.+
T Consensus 327 ----~~~~pe~la~~l~~ll~~ 344 (381)
T COG0763 327 ----EDCTPENLARALEELLLN 344 (381)
T ss_pred ----hhcCHHHHHHHHHHHhcC
Confidence 345688999999999987
No 125
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.98 E-value=0.00028 Score=75.57 Aligned_cols=183 Identities=14% Similarity=0.054 Sum_probs=100.4
Q ss_pred HHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCC---CCeeEeccC
Q 008028 360 QSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICP---EKARGITKF 434 (580)
Q Consensus 360 ~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~---~~v~~~~~~ 434 (580)
|+.+|||. +..+++.+.++ .|=-+..++.+.++.+ |+.+|++..... .-++.+++...+.+ +++.|...-
T Consensus 276 R~~~gLp~--d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~~~ 350 (468)
T PF13844_consen 276 RAQYGLPE--DAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSPVA 350 (468)
T ss_dssp TGGGT--S--SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE--
T ss_pred HHHcCCCC--CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcCCC
Confidence 78899984 44666666665 7777788888877765 899998876543 23455555555544 467776544
Q ss_pred ChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHH
Q 008028 435 STPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKH 514 (580)
Q Consensus 435 ~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~ 514 (580)
....--..++.+|++|=|..+ +-|++.+||+.+|+|+|+-....+..=+.. +++- ...|...-..|.++..+.
T Consensus 351 ~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~a---SiL~---~lGl~ElIA~s~~eYv~~ 423 (468)
T PF13844_consen 351 PREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGA---SILR---ALGLPELIADSEEEYVEI 423 (468)
T ss_dssp -HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHH---HHHH---HHT-GGGB-SSHHHHHHH
T ss_pred CHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHH---HHHH---HcCCchhcCCCHHHHHHH
Confidence 433333578999999988644 347899999999999988774433221110 0000 000011123567777777
Q ss_pred HHHHHHhcChhHHHHHH---HHHHH--hcCCchHHHHHHHHHHHHHH
Q 008028 515 VNRAVATYGTPALKEMI---QNCMA--LDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 515 l~~ll~~~~~~~~~~~~---~~~~~--~~fs~~~~a~~~~~~~~~l~ 556 (580)
-.++..+ ++.+.++. ++.+. .-|+-++.++++++.|.++.
T Consensus 424 Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 424 AVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 7777776 44433332 22232 25899999999999998763
No 126
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.89 E-value=0.0015 Score=68.55 Aligned_cols=195 Identities=20% Similarity=0.159 Sum_probs=116.9
Q ss_pred HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHH
Q 008028 279 MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEA 358 (580)
Q Consensus 279 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 358 (580)
.+..-+.+|.+++.=|.-.+.+.+ .|+ ++.+|-|..= +...+... +..
T Consensus 127 ~~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl~-d~~~~~~~-------------------~~~ 174 (373)
T PF02684_consen 127 AKKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPLL-DEVKPEPD-------------------RAE 174 (373)
T ss_pred HHHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcch-hhhccCCC-------------------HHH
Confidence 455567889999999988888876 443 4566655431 11111111 344
Q ss_pred HHHHcCCCCCCCCc-EEEEEc-cCcccc-CHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEecc
Q 008028 359 LQSQLGLPVDRNIP-LIGFIG-RLEEQK-GSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITK 433 (580)
Q Consensus 359 ~~~~~glp~~~~~~-~i~f~G-rl~~~K-g~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~ 433 (580)
.++.+ ++ ++.+ +.++.| |-.+-+ .+..++++++++.+ +++++++..... .....+.+.....+..+.....
T Consensus 175 ~~~~~-l~--~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~~ 250 (373)
T PF02684_consen 175 AREKL-LD--PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVII 250 (373)
T ss_pred HHHhc-CC--CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEEc
Confidence 55555 65 3444 445556 455544 45889999999876 789998876543 3444455555544432322221
Q ss_pred CChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC-CCCcceeEec-----Ccee--------EEEeecccc
Q 008028 434 FSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLFDTVKE-----GITG--------FQMRSFHVE 499 (580)
Q Consensus 434 ~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~-~gg~~e~i~~-----~~~G--------~~~~~~~~~ 499 (580)
.......++.||+.+.. +|++-+|++.+|+|.|+.- .+.+.-.+.. ...| -+++++--
T Consensus 251 --~~~~~~~m~~ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ- 322 (373)
T PF02684_consen 251 --EGESYDAMAAADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQ- 322 (373)
T ss_pred --CCchHHHHHhCcchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhc-
Confidence 22344589999998876 5999999999999965544 4422111110 0000 01112222
Q ss_pred cccCCcccHHHHHHHHHHHHHh
Q 008028 500 CDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 500 ~~~v~~~d~~~la~~l~~ll~~ 521 (580)
+..+++.+++++..++++
T Consensus 323 ----~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 323 ----EDATPENIAAELLELLEN 340 (373)
T ss_pred ----ccCCHHHHHHHHHHHhcC
Confidence 456899999999999997
No 127
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=97.81 E-value=3.7e-05 Score=81.16 Aligned_cols=215 Identities=19% Similarity=0.177 Sum_probs=135.0
Q ss_pred ccchHHHHHHhcCceeEeeCHHHHHHHHcccc---CCcchhhhhhcCCeeEecCCCCCCCcC----CCCcccccccc---
Q 008028 274 RKINWMKAGILESDRVLTVSPHYAKELISGEE---KGVELDNIIRKTGISGIVNGMDVQEWN----PSTDRYINVNY--- 343 (580)
Q Consensus 274 ~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~---~g~~~~~~~~~~~i~~I~NGvd~~~~~----~~~~~~l~~~~--- 343 (580)
+.++|...++-.++.|++|-+-.++-+.+... +.+.++ |..--+||+-+..|. |.-.+-|....
T Consensus 439 k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~------KFqNkTNGITPRRWL~~cnP~LadlI~e~ige~ 512 (843)
T KOG2099|consen 439 KRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPE------KFQNKTNGITPRRWLLLCNPGLADLITEKIGEE 512 (843)
T ss_pred ceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChH------HhccccCCcCHHHHHHhcCchHHHHHHHHhhhH
Confidence 35666666777788888887755554443211 122222 666778999888773 22111111111
Q ss_pred -------------------CchhhhccchHHHHH----HHHHcCCCCCCCCcEEEEEccCccccCHHH----HHHHHhhh
Q 008028 344 -------------------DATTVMNAKPLVKEA----LQSQLGLPVDRNIPLIGFIGRLEEQKGSDI----LAQAIPKF 396 (580)
Q Consensus 344 -------------------~~~~~~~~~~~~~~~----~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~----ll~a~~~l 396 (580)
....|...|..+|.. +.+++|...+++...=+-+-|+.++|+..+ ++-.+.++
T Consensus 513 ~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~ri 592 (843)
T KOG2099|consen 513 WITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRI 592 (843)
T ss_pred hhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123455566666543 346677666666555567889999998543 33333444
Q ss_pred cCC-----CeEEEEEec-CC------hhhHHHHHHHHHHC--------CCCeeEeccCChHHHHHHHhcCCEEEecCC--
Q 008028 397 MGG-----NVQIVVLGT-GK------KPMEQQIEQLEIIC--------PEKARGITKFSTPLAHKIIAGADFMLVPSR-- 454 (580)
Q Consensus 397 ~~~-----~v~lii~G~-g~------~~~~~~i~~l~~~~--------~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~-- 454 (580)
+++ .-+.+++|+ .. +.+.+.+...+... .-+++|+..|...++..++.++|+-=.-|.
T Consensus 593 K~e~~k~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAG 672 (843)
T KOG2099|consen 593 KEEPAKAFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAG 672 (843)
T ss_pred hhhhhhccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhcc
Confidence 442 234555554 22 23334444333311 127999999999999999999998765555
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCCcceeEec--CceeEEEe
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKE--GITGFQMR 494 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~~~~ 494 (580)
.|++|++-|.-|.+|+-.|.|-.|...|+.++ .+|-|+||
T Consensus 673 tEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG 714 (843)
T KOG2099|consen 673 TEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFG 714 (843)
T ss_pred ccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEec
Confidence 79999999999999999999988887776654 35778887
No 128
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=97.70 E-value=0.00085 Score=60.06 Aligned_cols=133 Identities=17% Similarity=0.174 Sum_probs=75.8
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCeeEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRV 165 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (580)
||++|+... ..++..++++|.+.|++|+++++..+. ... ....++.++
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~-~~~----------------------~~~~~i~~~ 48 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDY-EKY----------------------EIIEGIKVI 48 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCc-hhh----------------------hHhCCeEEE
Confidence 688998763 245779999999999999999996422 110 012344444
Q ss_pred EecCccchhhhccCCCCcccCCCCCCCCCchHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEecCCcc-chHHH
Q 008028 166 FVDHPVFLEKVWGKTGSKIYGPKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHT-ALLPC 244 (580)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~~~~~-~~l~~ 244 (580)
.+..+. . . ...+.. .....+.++.. +|| |+|+|...+ ++++.
T Consensus 49 ~~~~~~--k------------------~---~~~~~~-~~~l~k~ik~~------------~~D-vIh~h~~~~~~~~~~ 91 (139)
T PF13477_consen 49 RLPSPR--K------------------S---PLNYIK-YFRLRKIIKKE------------KPD-VIHCHTPSPYGLFAM 91 (139)
T ss_pred EecCCC--C------------------c---cHHHHH-HHHHHHHhccC------------CCC-EEEEecCChHHHHHH
Confidence 442220 0 0 001111 11223333332 699 899998766 56666
Q ss_pred HHHHhhhccCccccceE-EEcCCCCCCCCCc----cchHHHHHHhcCceeEeeC
Q 008028 245 YLKFMYQSKGIHKNAKR-LCRPRYDKPVKGR----KINWMKAGILESDRVLTVS 293 (580)
Q Consensus 245 ~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~----~~~~~~~~~~~ad~vi~vS 293 (580)
+++...+ ..++ ++.|+.+-..... ...+++.+++.+|.+++.|
T Consensus 92 l~~~~~~------~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 92 LAKKLLK------NKKVIYTVHGSDFYNSSKKKKLKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred HHHHHcC------CCCEEEEecCCeeecCCchHHHHHHHHHHHHHhCCEEEEcC
Confidence 6655432 2344 6666542222221 2346678889999999876
No 129
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family.
Probab=97.63 E-value=8.9e-06 Score=70.60 Aligned_cols=62 Identities=11% Similarity=0.072 Sum_probs=54.6
Q ss_pred ccccccccccccccHHHHHhhhhchhhhhhcccccCCCCCCCcc-ccc-C-----CCceEEEEeecccC
Q 008028 35 SMTHSGLRSLNTIDRLQMKSYAKAVVTKATKNEQQTPNNVPSKK-IIC-Q-----QGMNLVFVGAEVAP 96 (580)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~mkI~~vs~e~~P 96 (580)
.++|||+++|+.+|+.++.++++|..++.+.+.+...++.|+.. .+| . ....|+|||+||+-
T Consensus 46 ~~~~NPv~~L~~vs~~rL~~la~D~~fl~~~~~v~~~f~~Ym~~~~~W~~~~~~~~~~~IAYFSmEfGl 114 (118)
T PF11897_consen 46 ESGHNPVRLLQEVSQERLEELAQDPEFLARYDRVYARFEEYMSQKPTWFQEPGDTPNPPIAYFSMEFGL 114 (118)
T ss_pred HcCCCHHHHHHHCCHHHHHHHhCCHHHHHHHHHHHHHHHHHHcCCCccccCCCCCCCCCEEEEcccccc
Confidence 45899999999999999999999999999999999999999988 555 2 24789999999743
No 130
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.62 E-value=0.037 Score=57.45 Aligned_cols=273 Identities=14% Similarity=0.042 Sum_probs=156.0
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceEEEc-CCCCCCCCCccchHHHHHH-hcCceeEeeCHHHHHHHHccc
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCR-PRYDKPVKGRKINWMKAGI-LESDRVLTVSPHYAKELISGE 304 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l-~~~~~~~~~~~~~~~~~~~-~~ad~vi~vS~~~~~~l~~~~ 304 (580)
+||+|+..-|-.+.+++....... .+++... .|.........-..-|... ..||.-++.++..++.|.+
T Consensus 92 kPD~VlVhGDT~t~lA~alaa~~~-------~IpV~HvEAGlRt~~~~~PEE~NR~l~~~~S~~hfapte~ar~nLl~-- 162 (383)
T COG0381 92 KPDLVLVHGDTNTTLAGALAAFYL-------KIPVGHVEAGLRTGDLYFPEEINRRLTSHLSDLHFAPTEIARKNLLR-- 162 (383)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHh-------CCceEEEecccccCCCCCcHHHHHHHHHHhhhhhcCChHHHHHHHHH--
Confidence 699554444777777766554432 2333111 1111110000111123333 4789999999999999987
Q ss_pred cCCcchhhhhhcCCeeEecCCC-CCCCcCCCCccccccccCchhhhccchHHHHHHHHH-cCCCCCCCCcEEEEEccCcc
Q 008028 305 EKGVELDNIIRKTGISGIVNGM-DVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQ-LGLPVDRNIPLIGFIGRLEE 382 (580)
Q Consensus 305 ~~g~~~~~~~~~~~i~~I~NGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~glp~~~~~~~i~f~Grl~~ 382 (580)
-|++.+ +|.++-|.+ |.-.+..... ..+..+... ++. ..+..+++.+=|-+.
T Consensus 163 -EG~~~~------~IfvtGnt~iDal~~~~~~~-----------------~~~~~~~~~~~~~--~~~~~iLvT~HRreN 216 (383)
T COG0381 163 -EGVPEK------RIFVTGNTVIDALLNTRDRV-----------------LEDSKILAKGLDD--KDKKYILVTAHRREN 216 (383)
T ss_pred -cCCCcc------ceEEeCChHHHHHHHHHhhh-----------------ccchhhHHhhhcc--ccCcEEEEEcchhhc
Confidence 677765 788888764 3222210000 001111211 222 122234444445443
Q ss_pred -ccCHHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCcc
Q 008028 383 -QKGSDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCG 459 (580)
Q Consensus 383 -~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g 459 (580)
.+++..+++++.++.. ++++++.---..+.++... ....+...++..+..++-.....++..|-+++- -+|
T Consensus 217 ~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~v~li~pl~~~~f~~L~~~a~~ilt-----DSG 290 (383)
T COG0381 217 VGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVERVKLIDPLGYLDFHNLMKNAFLILT-----DSG 290 (383)
T ss_pred ccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCcEEEeCCcchHHHHHHHHhceEEEe-----cCC
Confidence 4899999999988866 4777776554433222222 222222235777777777777778999865552 368
Q ss_pred HHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHHHhcC
Q 008028 460 LIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDL 539 (580)
Q Consensus 460 ~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~f 539 (580)
..+=||-..|+|+++-....-+....+.++-.++ ..|.+.+.+++..++++ ++.+.+|... ...|
T Consensus 291 giqEEAp~lg~Pvl~lR~~TERPE~v~agt~~lv-----------g~~~~~i~~~~~~ll~~--~~~~~~m~~~--~npY 355 (383)
T COG0381 291 GIQEEAPSLGKPVLVLRDTTERPEGVEAGTNILV-----------GTDEENILDAATELLED--EEFYERMSNA--KNPY 355 (383)
T ss_pred chhhhHHhcCCcEEeeccCCCCccceecCceEEe-----------CccHHHHHHHHHHHhhC--hHHHHHHhcc--cCCC
Confidence 8999999999999998866555555554555554 45679999999999997 5555555432 2334
Q ss_pred CchHHHHHHHHHHHHH
Q 008028 540 SWKEPARLWEKMLLSM 555 (580)
Q Consensus 540 s~~~~a~~~~~~~~~l 555 (580)
.--..+++..++++..
T Consensus 356 gdg~as~rIv~~l~~~ 371 (383)
T COG0381 356 GDGNASERIVEILLNY 371 (383)
T ss_pred cCcchHHHHHHHHHHH
Confidence 4444555555555543
No 131
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.58 E-value=0.039 Score=59.59 Aligned_cols=179 Identities=17% Similarity=0.118 Sum_probs=110.4
Q ss_pred HHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCC-hhhHHHHHHHHHHCC---CCeeEecc
Q 008028 360 QSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGK-KPMEQQIEQLEIICP---EKARGITK 433 (580)
Q Consensus 360 ~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~-~~~~~~i~~l~~~~~---~~v~~~~~ 433 (580)
|..+|||. +..+++..+ ...|-...+++..-++.+ ++-.|++.|.|+ ++....++++.++.+ .+++|...
T Consensus 421 R~~lglp~--~avVf~c~~--n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPE--DAVVFCCFN--NYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCC--CeEEEEecC--CcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 57789984 333444333 457776677776666655 788888888765 567888999988765 47888777
Q ss_pred CChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcce-----eEe-cCceeEEEeecccccccCCccc
Q 008028 434 FSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFD-----TVK-EGITGFQMRSFHVECDRVDLAD 507 (580)
Q Consensus 434 ~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e-----~i~-~~~~G~~~~~~~~~~~~v~~~d 507 (580)
-..+.-..-+.-||+++=+.-+- -+++..||+.+|+||++-...-+.. ++. -|..-++ . .+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY~-g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~v-----------A-~s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPYG-GHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELV-----------A-DS 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccCC-CccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhh-----------c-CC
Confidence 66665557899999999776543 3688999999999888644211110 011 1111121 1 22
Q ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHH----HHh--cCCchHHHHHHHHHHHHHHhc
Q 008028 508 VAAIAKHVNRAVATYGTPALKEMIQNC----MAL--DLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 508 ~~~la~~l~~ll~~~~~~~~~~~~~~~----~~~--~fs~~~~a~~~~~~~~~l~~~ 558 (580)
.++ .+...+..-......+..+.. +.+ -|+.+..+++++++|.++...
T Consensus 564 ~~d---YV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 564 RAD---YVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHH---HHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 222 233333321112222222332 222 588999999999999988753
No 132
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.55 E-value=0.0075 Score=66.39 Aligned_cols=154 Identities=17% Similarity=0.162 Sum_probs=96.1
Q ss_pred HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCC-CCCCcCCCCccccccccCchhhhccchHHHH
Q 008028 279 MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGM-DVQEWNPSTDRYINVNYDATTVMNAKPLVKE 357 (580)
Q Consensus 279 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 357 (580)
.+..-+..|++++.=|.-.+.+.+ .|+ +++.|-|.. |. ..... +++
T Consensus 355 ikki~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~-------------------~~~ 401 (608)
T PRK01021 355 KTILEKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFS-------------------PNL 401 (608)
T ss_pred HHHHHHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCC-------------------CHH
Confidence 455567889999999988888875 344 455665543 32 11111 145
Q ss_pred HHHHHcCCCCCCCCcEEEEEc-cCcc-ccCHHHHHHHHh--hhcCCCeEEEEEecCChhhHHHHHHHHHHCCC-CeeEec
Q 008028 358 ALQSQLGLPVDRNIPLIGFIG-RLEE-QKGSDILAQAIP--KFMGGNVQIVVLGTGKKPMEQQIEQLEIICPE-KARGIT 432 (580)
Q Consensus 358 ~~~~~~glp~~~~~~~i~f~G-rl~~-~Kg~~~ll~a~~--~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~-~v~~~~ 432 (580)
.+++++|++.+. ..+-++.| |-.+ .+....++++++ ++. ++.++++....+ ...+.+++.....+. .+....
T Consensus 402 ~~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~ii~ 478 (608)
T PRK01021 402 SWKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSANP-KYDHLILEVLQQEGCLHSHIVP 478 (608)
T ss_pred HHHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecCch-hhHHHHHHHHhhcCCCCeEEec
Confidence 678889985332 23446666 4545 555788999997 554 368887754332 234455554433221 122221
Q ss_pred cCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 433 KFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 433 ~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
......+++.||+.+.. +|++-+|++.+|+|.|+.-
T Consensus 479 ---~~~~~~~m~aaD~aLaa-----SGTaTLEaAL~g~PmVV~Y 514 (608)
T PRK01021 479 ---SQFRYELMRECDCALAK-----CGTIVLETALNQTPTIVTC 514 (608)
T ss_pred ---CcchHHHHHhcCeeeec-----CCHHHHHHHHhCCCEEEEE
Confidence 21235789999999976 5999999999999966644
No 133
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.53 E-value=0.022 Score=59.56 Aligned_cols=209 Identities=17% Similarity=0.100 Sum_probs=131.7
Q ss_pred hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHH
Q 008028 277 NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVK 356 (580)
Q Consensus 277 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 356 (580)
...+..++..|.|+..|+..++++.+ .|.+ ++.+.-| ........ .......
T Consensus 169 ~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~~ 220 (419)
T COG1519 169 FLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAEL 220 (419)
T ss_pred HHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHHH
Confidence 45677888999999999999999997 6665 4333333 22211111 1112235
Q ss_pred HHHHHHcCCCCCCCCcEEEEEccCccccC-HHHHHHHHhhhcC--CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEecc
Q 008028 357 EALQSQLGLPVDRNIPLIGFIGRLEEQKG-SDILAQAIPKFMG--GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITK 433 (580)
Q Consensus 357 ~~~~~~~glp~~~~~~~i~f~Grl~~~Kg-~~~ll~a~~~l~~--~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~ 433 (580)
..+|..++.+ ++++++++. +.| -++++++.+.+++ ++..+|++=.-++.. +.+.++..+.+-++...-.
T Consensus 221 ~~~r~~l~~~----r~v~iaaST---H~GEeei~l~~~~~l~~~~~~~llIlVPRHpERf-~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 221 AALRRQLGGH----RPVWVAAST---HEGEEEIILDAHQALKKQFPNLLLILVPRHPERF-KAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred HHHHHhcCCC----CceEEEecC---CCchHHHHHHHHHHHHhhCCCceEEEecCChhhH-HHHHHHHHHcCCeEEeecC
Confidence 6778777753 568888887 444 4568888888877 678888887766433 3344444433222211111
Q ss_pred C-------------ChHHHHHHHhcCCEEEecCC-CCCccHHHHHHHHcCCceEEcCC-CCccee---EecCceeEEEee
Q 008028 434 F-------------STPLAHKIIAGADFMLVPSR-FEPCGLIQLHAMRYGTVPIVAST-GGLFDT---VKEGITGFQMRS 495 (580)
Q Consensus 434 ~-------------~~~~~~~~~~~aDi~l~ps~-~E~~g~~~lEAma~G~PvI~s~~-gg~~e~---i~~~~~G~~~~~ 495 (580)
- ..-++..+|+.+|+.++--. .+--|=-.+|+.++|+|+|.-.. --..|+ +.+.+.|+.+
T Consensus 293 ~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v-- 370 (419)
T COG1519 293 GDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV-- 370 (419)
T ss_pred CCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE--
Confidence 0 12334569999999887644 44456679999999999998763 223333 3334456654
Q ss_pred cccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 008028 496 FHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCM 535 (580)
Q Consensus 496 ~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~ 535 (580)
.|.+.+++.+..++.+ .+.+.+|++++.
T Consensus 371 ----------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~ 398 (419)
T COG1519 371 ----------EDADLLAKAVELLLAD--EDKREAYGRAGL 398 (419)
T ss_pred ----------CCHHHHHHHHHHhcCC--HHHHHHHHHHHH
Confidence 4577778888777776 677788877763
No 134
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.42 E-value=0.013 Score=58.96 Aligned_cols=165 Identities=13% Similarity=0.133 Sum_probs=108.7
Q ss_pred cEEEEEcc-CccccCHHHHHHHHhhhcCCCeEEEEE-ec--CChhhHHHHHHHHHHC-C-CCeeEeccCC-hHHHHHHHh
Q 008028 372 PLIGFIGR-LEEQKGSDILAQAIPKFMGGNVQIVVL-GT--GKKPMEQQIEQLEIIC-P-EKARGITKFS-TPLAHKIIA 444 (580)
Q Consensus 372 ~~i~f~Gr-l~~~Kg~~~ll~a~~~l~~~~v~lii~-G~--g~~~~~~~i~~l~~~~-~-~~v~~~~~~~-~~~~~~~~~ 444 (580)
++-+-+|+ -++.-+...+++++.+....++++++- |- |.+.+.+++.+.+.++ + +++..+..+- -++-..+++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 34444554 567777888999998887789987765 44 6788999999998864 4 5777666553 234446999
Q ss_pred cCCEEEecC-CCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcC
Q 008028 445 GADFMLVPS-RFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYG 523 (580)
Q Consensus 445 ~aDi~l~ps-~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 523 (580)
.||+.++.- +.++.|+.++ .+..|+||+.+..-..|..+.+-..-+++ +. +.-|...+.++=.++..
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv~Vlf---~~-----d~L~~~~v~e~~rql~~--- 293 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGLPVLF---TG-----DDLDEDIVREAQRQLAS--- 293 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCCeEEe---cC-----CcccHHHHHHHHHHHHh---
Confidence 999999886 4699999887 89999999888755555545443333333 11 33333333222111111
Q ss_pred hhHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 008028 524 TPALKEMIQNCMALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
.-++.+ .|+-...++.|.++|....
T Consensus 294 ------~dk~~I--~Ff~pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 294 ------VDKNII--AFFSPNYLQGWRNALAIAA 318 (322)
T ss_pred ------hCccee--eecCHhHHHHHHHHHHHhh
Confidence 111112 2999999999999988765
No 135
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.34 E-value=0.0095 Score=61.68 Aligned_cols=118 Identities=14% Similarity=0.177 Sum_probs=70.0
Q ss_pred EEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEec
Q 008028 373 LIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVP 452 (580)
Q Consensus 373 ~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~p 452 (580)
+++|.|. -+...+++++.++ +++++++ |+... ... .+++++.+.. |..+....+++.||+++.-
T Consensus 191 iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~~-------~~~~~v~~~~-~~~~~~~~~l~~ad~vI~~ 254 (321)
T TIGR00661 191 ILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AKN-------SYNENVEIRR-ITTDNFKELIKNAELVITH 254 (321)
T ss_pred EEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Ccc-------ccCCCEEEEE-CChHHHHHHHHhCCEEEEC
Confidence 4555443 3456677777665 3455444 43221 111 2334566553 5444456799999999976
Q ss_pred CCCCCccHHHHHHHHcCCceEEcCCCCccee------EecCceeEEEeecccccccCCcccHHHHHHHHHHHHHh
Q 008028 453 SRFEPCGLIQLHAMRYGTVPIVASTGGLFDT------VKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 453 s~~E~~g~~~lEAma~G~PvI~s~~gg~~e~------i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 521 (580)
+- ..++.||+++|+|++.....+..|. +.+.+.|..+ +..+. ++.+++...+++
T Consensus 255 ~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 255 GG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 52 2469999999999999887664442 3344566665 66665 444444444443
No 136
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.85 E-value=0.089 Score=52.82 Aligned_cols=185 Identities=20% Similarity=0.215 Sum_probs=104.9
Q ss_pred HHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHH
Q 008028 280 KAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEAL 359 (580)
Q Consensus 280 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 359 (580)
+..+..|+.+++.+......+.. .|-++.++..-..+.-+. +...|.|. ..+
T Consensus 121 kl~~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~---~v~~f~pd----------------------~ev 172 (346)
T COG1817 121 KLTLPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELA---NVYGFVPD----------------------PEV 172 (346)
T ss_pred hcchhhhhheecccccchHHHHH---hCCCccceecccceeEEe---ecccCCCC----------------------HHH
Confidence 45567899999998877777664 666544322211222222 22234443 345
Q ss_pred HHHcCCCCCCCCcEEEE-Ec-----cCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEecc
Q 008028 360 QSQLGLPVDRNIPLIGF-IG-----RLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITK 433 (580)
Q Consensus 360 ~~~~glp~~~~~~~i~f-~G-----rl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~ 433 (580)
-+++|+..+ .++|++ .- -...+++.+.+.++++.|.+.. ++++-.. +...+.++.+... + ...
T Consensus 173 lkeLgl~~~--~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~-~~~~eife~~~n~----i--~pk 241 (346)
T COG1817 173 LKELGLEEG--ETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPRE-KEQAEIFEGYRNI----I--IPK 241 (346)
T ss_pred HHHcCCCCC--CceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCc-hhHHHHHhhhccc----c--CCc
Confidence 678888643 234332 11 1234667778888888886655 4444432 2233333333211 1 111
Q ss_pred CChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCC---CcceeEecCceeEEEeecccccccCCcccHHH
Q 008028 434 FSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTG---GLFDTVKEGITGFQMRSFHVECDRVDLADVAA 510 (580)
Q Consensus 434 ~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~g---g~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~ 510 (580)
- ....-.++--|++++ -+.|+..-||...|+|.|++.-| +..+... +.|.++ ...|+.+
T Consensus 242 ~-~vD~l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~----------~s~~~~~ 303 (346)
T COG1817 242 K-AVDTLSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY----------HSTDEIA 303 (346)
T ss_pred c-cccHHHHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee----------ecCCHHH
Confidence 1 111123666677776 35688899999999999999854 2223333 367777 5567777
Q ss_pred HHHHHHHHHHh
Q 008028 511 IAKHVNRAVAT 521 (580)
Q Consensus 511 la~~l~~ll~~ 521 (580)
..+...+.+.+
T Consensus 304 ~~~~a~~~l~~ 314 (346)
T COG1817 304 IVEYAVRNLKY 314 (346)
T ss_pred HHHHHHHHhhc
Confidence 77777777765
No 137
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.78 E-value=1.1 Score=48.38 Aligned_cols=134 Identities=13% Similarity=0.227 Sum_probs=76.6
Q ss_pred HHHHHHHhhhcCCCeEEEEEecC------ChhhHHHHHHHHHHCCC--Cee-EeccCChHHHHHHHhcCCEEEecCCCCC
Q 008028 387 DILAQAIPKFMGGNVQIVVLGTG------KKPMEQQIEQLEIICPE--KAR-GITKFSTPLAHKIIAGADFMLVPSRFEP 457 (580)
Q Consensus 387 ~~ll~a~~~l~~~~v~lii~G~g------~~~~~~~i~~l~~~~~~--~v~-~~~~~~~~~~~~~~~~aDi~l~ps~~E~ 457 (580)
..+.+++..+.+++.+++++-.. .+......+++....+. ++. ....++..++..+++.||+++- .|+-
T Consensus 260 ~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig-~RlH- 337 (426)
T PRK10017 260 KAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVG-TRLH- 337 (426)
T ss_pred HHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEE-ecch-
Confidence 45666777776666666655431 12223333444444332 222 2344666677789999998773 3332
Q ss_pred ccHHHHHHHHcCCceEEcCCCC-cceeEec-CceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 008028 458 CGLIQLHAMRYGTVPIVASTGG-LFDTVKE-GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCM 535 (580)
Q Consensus 458 ~g~~~lEAma~G~PvI~s~~gg-~~e~i~~-~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~ 535 (580)
+.+=|++.|+|+|.-.... ...++.+ |...+++ .++.-+.+++.+.+.+++++ ++++++..++++
T Consensus 338 ---a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~--------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~v 404 (426)
T PRK10017 338 ---SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI--------DIRHLLDGSLQAMVADTLGQ--LPALNARLAEAV 404 (426)
T ss_pred ---HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe--------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 3566999999998877431 1112211 1112222 12556778899999999997 666665555543
No 138
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=96.75 E-value=0.023 Score=60.44 Aligned_cols=156 Identities=11% Similarity=0.083 Sum_probs=83.7
Q ss_pred cEEEEEccCccccCHHHHHHHHhhhcCCCeEEE-EEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEE
Q 008028 372 PLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIV-VLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFML 450 (580)
Q Consensus 372 ~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~li-i~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l 450 (580)
++++..|.....+. ..+-.+++.+.+.+++++ .+|.+.. ...+. ..+.++......+.. .+++.||++|
T Consensus 227 ~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~~---~ll~~~~~~I 296 (392)
T TIGR01426 227 VVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQL---EILKKADAFI 296 (392)
T ss_pred EEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCHH---HHHhhCCEEE
Confidence 45677777533322 222223333333466655 4455432 11222 234556555443332 4899999999
Q ss_pred ecCCCCCccHHHHHHHHcCCceEEcCCCCcc----eeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhH
Q 008028 451 VPSRFEPCGLIQLHAMRYGTVPIVASTGGLF----DTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPA 526 (580)
Q Consensus 451 ~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~----e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~ 526 (580)
..+ + ..+.+||+++|+|+|+....+-. +.+.+.+.|..+. . +.-+.++++++|.+++++ ++.
T Consensus 297 ~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~---~-----~~~~~~~l~~ai~~~l~~--~~~ 362 (392)
T TIGR01426 297 THG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP---P-----EEVTAEKLREAVLAVLSD--PRY 362 (392)
T ss_pred ECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec---c-----ccCCHHHHHHHHHHHhcC--HHH
Confidence 654 2 24689999999999997654322 2233445566541 0 233578999999999986 322
Q ss_pred HHH--HHHHHHHhcCCchHHHHHHHHH
Q 008028 527 LKE--MIQNCMALDLSWKEPARLWEKM 551 (580)
Q Consensus 527 ~~~--~~~~~~~~~fs~~~~a~~~~~~ 551 (580)
+.. ..++.+.+.-..++.++..+++
T Consensus 363 ~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 363 AERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 111 1122233444555555554443
No 139
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.46 E-value=0.89 Score=46.74 Aligned_cols=164 Identities=16% Similarity=0.154 Sum_probs=107.0
Q ss_pred cEEEEEcc-CccccCHHHHHHHHhhhcCCCeEEEEE-ecC--ChhhHHHHHHHHHHC-C-CCeeEeccC-ChHHHHHHHh
Q 008028 372 PLIGFIGR-LEEQKGSDILAQAIPKFMGGNVQIVVL-GTG--KKPMEQQIEQLEIIC-P-EKARGITKF-STPLAHKIIA 444 (580)
Q Consensus 372 ~~i~f~Gr-l~~~Kg~~~ll~a~~~l~~~~v~lii~-G~g--~~~~~~~i~~l~~~~-~-~~v~~~~~~-~~~~~~~~~~ 444 (580)
+.-+.+|+ -++.-+...+++++.+....++++++- |-| .+++++++.+.+.++ + +++..+..| +-++-..+++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 34444554 556777888888888766678887765 444 467899898888864 4 356555444 3344456999
Q ss_pred cCCEEEecCC-CCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcC
Q 008028 445 GADFMLVPSR-FEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYG 523 (580)
Q Consensus 445 ~aDi~l~ps~-~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 523 (580)
.||+.+++.. ..+.|+.++ .+.+|+||+.+.....+..+.+...-+++ .+ |.-|.+.+.++=.++..-
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf---~~-----d~L~~~~v~ea~rql~~~-- 333 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF---YG-----DELDEALVREAQRQLANV-- 333 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe---cc-----ccCCHHHHHHHHHHHhhC--
Confidence 9999999985 689999887 89999999999988878777765444443 11 444555555544444332
Q ss_pred hhHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 008028 524 TPALKEMIQNCMALDLSWKEPARLWEKMLLSM 555 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 555 (580)
++ + .-.|.-..-.+.|...+...
T Consensus 334 -dk------~--~iaFf~pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 334 -DK------Q--QIAFFAPNYLQGWRQALRLA 356 (360)
T ss_pred -cc------c--ceeeeCCchHHHHHHHHHHH
Confidence 11 0 11255556667776666533
No 140
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.31 E-value=0.26 Score=56.09 Aligned_cols=258 Identities=18% Similarity=0.163 Sum_probs=158.8
Q ss_pred CceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCCCCCC-Cc---cchHHHHHHhcCceeEeeCHHHHHHHHc
Q 008028 228 EDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVK-GR---KINWMKAGILESDRVLTVSPHYAKELIS 302 (580)
Q Consensus 228 pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~-~~---~~~~~~~~~~~ad~vi~vS~~~~~~l~~ 302 (580)
.| ++..||.|.-++|-+++... ...++ +.+|...+... .+ ...-.-.++..+|.+-.....+++.+.+
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls 213 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLS 213 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHH
Confidence 35 88999999999988877653 34566 66553322210 01 1122234556778777777777776654
Q ss_pred ccc--CCcchhh-----hh----hcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHH-HHHHHHHcCCCCCCC
Q 008028 303 GEE--KGVELDN-----II----RKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLV-KEALQSQLGLPVDRN 370 (580)
Q Consensus 303 ~~~--~g~~~~~-----~~----~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~glp~~~~ 370 (580)
.+- .|.+... ++ +...|..+|-|+|+..+...... ..... ...++..+ .+
T Consensus 214 ~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~-------------~~~~~~~~ei~~~~-----~g 275 (732)
T KOG1050|consen 214 TCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL-------------PYVGSKGMEIKEPF-----KG 275 (732)
T ss_pred HHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc-------------hhHHHHHHHHhhhc-----cC
Confidence 222 1111110 00 11256677888888776543211 00000 12222222 35
Q ss_pred CcEEEEEccCccccCHHHHHHHHhhhcC------CCeEEEEEecCC----h---hhHHHHHHHHH----HCCCC----ee
Q 008028 371 IPLIGFIGRLEEQKGSDILAQAIPKFMG------GNVQIVVLGTGK----K---PMEQQIEQLEI----ICPEK----AR 429 (580)
Q Consensus 371 ~~~i~f~Grl~~~Kg~~~ll~a~~~l~~------~~v~lii~G~g~----~---~~~~~i~~l~~----~~~~~----v~ 429 (580)
..+|+-+-|+...||...=+.+++++.. ..+.++.+..+. + +++.++..... ++... +.
T Consensus 276 ~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~ 355 (732)
T KOG1050|consen 276 KKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVH 355 (732)
T ss_pred CceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEE
Confidence 5688888899999999888888888765 356665554432 2 23333333332 33221 21
Q ss_pred -EeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcC----CceEEcCCCCcceeEecCceeEEEeecccccccCC
Q 008028 430 -GITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYG----TVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVD 504 (580)
Q Consensus 430 -~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G----~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~ 504 (580)
..-.++....-+++.-+|+.++.+..++..++.+|+..|. .+.|.+..-|..+..+++.-. +.
T Consensus 356 ~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aiv------------vn 423 (732)
T KOG1050|consen 356 SLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIV------------VN 423 (732)
T ss_pred EeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEE------------EC
Confidence 2233455666679999999999999999999999999884 668888877777776554322 38
Q ss_pred cccHHHHHHHHHHHHHhc
Q 008028 505 LADVAAIAKHVNRAVATY 522 (580)
Q Consensus 505 ~~d~~~la~~l~~ll~~~ 522 (580)
|-|.+.++..|..++..+
T Consensus 424 pw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 424 PWDGDEFAILISKALTMS 441 (732)
T ss_pred CcchHHHHHHHHHHhhcC
Confidence 889999999999999973
No 141
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.18 E-value=0.06 Score=50.08 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHHHHhHHhccCCCCCCCCCCCCceEEEec-CCccchHHHHHHHhhhccCccccceE--EE-----cC--
Q 008028 196 NQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGN-DWHTALLPCYLKFMYQSKGIHKNAKR--LC-----RP-- 265 (580)
Q Consensus 196 ~~~~~~~l~~~~~~~~r~l~~~~~~~~~~~~~pDvVih~~-~~~~~~l~~~l~~~~~~~gi~~~~~~--~~-----l~-- 265 (580)
....-..-++++.++++.|+.+ .|.|| ||.+| .|.. +++++.. +.++++ |+ -.
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~-------Gf~PD-vI~~H~GWGe---~Lflkdv------~P~a~li~Y~E~~y~~~g~ 104 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQ-------GFVPD-VIIAHPGWGE---TLFLKDV------FPDAPLIGYFEFYYRASGA 104 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHc-------CCCCC-EEEEcCCcch---hhhHHHh------CCCCcEEEEEEEEecCCCC
Confidence 3344445567777777666543 34699 56665 4544 3456654 445555 32 11
Q ss_pred --CCCCCCCC--------ccchH-HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCc
Q 008028 266 --RYDKPVKG--------RKINW-MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEW 331 (580)
Q Consensus 266 --~~~~~~~~--------~~~~~-~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~ 331 (580)
++++.... +..|. ....+..||..++.|.+.+..+-.. + +.||.||+-|||++.+
T Consensus 105 d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 105 DVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQFPAE----------F-RSKISVIHDGIDTDRF 170 (171)
T ss_pred cCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhCCHH----------H-HcCcEEeecccchhhc
Confidence 22222111 11122 2345668999999999887775431 1 1299999999998754
No 142
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=95.17 E-value=0.38 Score=50.70 Aligned_cols=201 Identities=11% Similarity=0.149 Sum_probs=96.0
Q ss_pred HHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHH
Q 008028 279 MKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEA 358 (580)
Q Consensus 279 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 358 (580)
........|.+++.|+...+.+.+. .+.+.+ .++..|..--.. +........+.
T Consensus 128 ~~~~~~~~d~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~PR~D~----------------l~~~~~~~~~~ 181 (369)
T PF04464_consen 128 YKRNYRNYDYFIVSSEFEKEIFKKA--FGYPED--------KILVTGYPRNDY----------------LFNKSKENRNR 181 (369)
T ss_dssp HHHHHTT-SEEEESSHHHHHHHHHH--TT--GG--------GEEES--GGGHH----------------HHHSTT-HHHH
T ss_pred hhhhccCCcEEEECCHHHHHHHHHH--hccCcc--------eEEEeCCCeEhH----------------HhccCHHHHHH
Confidence 4456678999999999988888763 444433 344556532110 00111112566
Q ss_pred HHHHcCCCCCCCCcEEEEEccCccccCH--------HHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeE
Q 008028 359 LQSQLGLPVDRNIPLIGFIGRLEEQKGS--------DILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARG 430 (580)
Q Consensus 359 ~~~~~glp~~~~~~~i~f~Grl~~~Kg~--------~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~ 430 (580)
+++.++++ .+..+|+|+=.+...... ..-++.+..+.+.++.+++-.-. .+....... .....++..
T Consensus 182 i~~~~~~~--~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp--~~~~~~~~~-~~~~~~i~~ 256 (369)
T PF04464_consen 182 IKKKLGID--KDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHP--NMKKKFKDF-KEDNSNIIF 256 (369)
T ss_dssp HHHHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SH--HHHTT-----TT-TTTEEE
T ss_pred HHHHhccC--CCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCc--hhhhchhhh-hccCCcEEE
Confidence 77888875 445699998655433322 12223333344578887775532 233332222 222344555
Q ss_pred eccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHH
Q 008028 431 ITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAA 510 (580)
Q Consensus 431 ~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~ 510 (580)
..... ....++..||++|- -+.-+.+|++..++|+|.-.-+- .+. ....|+.+. |...+.-.-..+.++
T Consensus 257 ~~~~~--~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~-~~Y--~~~rg~~~~-~~~~~pg~~~~~~~e 325 (369)
T PF04464_consen 257 VSDNE--DIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDL-EEY--EKERGFYFD-YEEDLPGPIVYNFEE 325 (369)
T ss_dssp -TT-S---HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTT-TTT--TTTSSBSS--TTTSSSS-EESSHHH
T ss_pred CCCCC--CHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccH-HHH--hhccCCCCc-hHhhCCCceeCCHHH
Confidence 44332 45569999999882 25668999999999999654321 111 111233221 111111112367899
Q ss_pred HHHHHHHHHHh
Q 008028 511 IAKHVNRAVAT 521 (580)
Q Consensus 511 la~~l~~ll~~ 521 (580)
|.++|..++++
T Consensus 326 L~~~i~~~~~~ 336 (369)
T PF04464_consen 326 LIEAIENIIEN 336 (369)
T ss_dssp HHHHHTTHHHH
T ss_pred HHHHHHhhhhC
Confidence 99999998875
No 143
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=94.81 E-value=0.5 Score=50.65 Aligned_cols=154 Identities=14% Similarity=0.135 Sum_probs=91.8
Q ss_pred cEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEe
Q 008028 372 PLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLV 451 (580)
Q Consensus 372 ~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ 451 (580)
++....|..... .+++-.+++.+.+-++++++...+.+ . -....++++.....++... ++..||++|.
T Consensus 239 ~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~-~------~~~~~p~n~~v~~~~p~~~---~l~~ad~vI~ 306 (406)
T COG1819 239 IVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR-D------TLVNVPDNVIVADYVPQLE---LLPRADAVIH 306 (406)
T ss_pred eEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc-c------ccccCCCceEEecCCCHHH---HhhhcCEEEe
Confidence 345555665544 44444444444445888888774421 0 1123455555544444333 7999999996
Q ss_pred cCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHH
Q 008028 452 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPAL 527 (580)
Q Consensus 452 ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 527 (580)
.. =-.+..||+.+|+|+|+--.+. +.+-+.+-..|..++ .+..+.+.++++|.++|++ +.+
T Consensus 307 hG----G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~--------~~~l~~~~l~~av~~vL~~---~~~ 371 (406)
T COG1819 307 HG----GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALP--------FEELTEERLRAAVNEVLAD---DSY 371 (406)
T ss_pred cC----CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecC--------cccCCHHHHHHHHHHHhcC---HHH
Confidence 64 3356889999999988766542 333345567787661 1368899999999999995 333
Q ss_pred HHHHHH---HHHhcCCchHHHHHHHHHH
Q 008028 528 KEMIQN---CMALDLSWKEPARLWEKML 552 (580)
Q Consensus 528 ~~~~~~---~~~~~fs~~~~a~~~~~~~ 552 (580)
.+..++ .+.+.-..+.+++..++.+
T Consensus 372 ~~~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 372 RRAAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 333332 2444455544555554443
No 144
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=94.44 E-value=1.8 Score=45.22 Aligned_cols=91 Identities=20% Similarity=0.152 Sum_probs=58.2
Q ss_pred cEEEEEccC-cc-ccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEE
Q 008028 372 PLIGFIGRL-EE-QKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFM 449 (580)
Q Consensus 372 ~~i~f~Grl-~~-~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~ 449 (580)
.+.++.|.- .+ .+-+..+++++.++.+...++++.|.... +.+++...+.. .+.+. . ....+++.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~---~~i~~~~~~~~-~~~~~----~-~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFKG---KDLKEIYGDIS-EFEIS----Y-DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCcH---HHHHHHHhcCC-CcEEe----c-cHHHHHHhhhHH
Confidence 345566643 23 34556777999888765577888876542 34444332221 22222 1 234689999998
Q ss_pred EecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 450 LVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 450 l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
+.. +|++-+|++.+|+|.|..-
T Consensus 240 l~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 240 FIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred Hhc-----CcHHHHHHHHhCCCEEEEE
Confidence 865 5999999999999977744
No 145
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.26 E-value=0.27 Score=50.83 Aligned_cols=207 Identities=14% Similarity=0.081 Sum_probs=127.5
Q ss_pred CceeEeeCHHH-HHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcC
Q 008028 286 SDRVLTVSPHY-AKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLG 364 (580)
Q Consensus 286 ad~vi~vS~~~-~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 364 (580)
-|.|++.++.. +..+.+ .|.. .++..+++++|.+.+.|....
T Consensus 139 fd~v~~~g~~l~~~~yyq---~~~~-------~~~~~~~~a~d~~~~~~i~~d--------------------------- 181 (373)
T COG4641 139 FDNVLSFGGGLVANKYYQ---EGGA-------RNCYYLPWAVDDSLFHPIPPD--------------------------- 181 (373)
T ss_pred hhhhhhccchHHHHHHHH---hhcc-------cceeccCccCCchhcccCCcc---------------------------
Confidence 34466667655 444442 1211 167888999999888775421
Q ss_pred CCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC-C------CeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCCh-
Q 008028 365 LPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG-G------NVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFST- 436 (580)
Q Consensus 365 lp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~-~------~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~- 436 (580)
..-.--+.++|...+. ..+.++++.. + +-++.+.|..- -...+.+ ....++...+.++.
T Consensus 182 ---a~~~~dL~~ign~~pD-----r~e~~ke~~~~ps~kl~v~rr~~~~g~~y--~~~~~~~---~~~~~~~yIg~~~~~ 248 (373)
T COG4641 182 ---ASYDVDLNLIGNPYPD-----RVEEIKEFFVEPSFKLMVDRRFYVLGPRY--PDDIWGR---TWEPNVQYIGYYNPK 248 (373)
T ss_pred ---ccceeeeEEecCCCcc-----HHHHHHHHhhccchhhhccceeeecCCcc--chhhhcc---cccchhhhhhccCcc
Confidence 0011147888877665 3444444322 1 24556666541 0111111 01112333334433
Q ss_pred HHHHHHHhcCCEEEecCCC---CCc---cHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHH
Q 008028 437 PLAHKIIAGADFMLVPSRF---EPC---GLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAA 510 (580)
Q Consensus 437 ~~~~~~~~~aDi~l~ps~~---E~~---g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~ 510 (580)
...+..++.-|+.++-++. ++. .+-+.|+++||.+.+++..-++.-.+.+|..-.+. .|..+
T Consensus 249 ~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~------------~d~kd 316 (373)
T COG4641 249 DGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY------------QDSKD 316 (373)
T ss_pred chhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe------------cCHHH
Confidence 4445577888888876652 332 56799999999999888888888888887766654 78999
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHHHHHH
Q 008028 511 IAKHVNRAVATYGTPALKEMIQNC---MALDLSWKEPARLWEKMLLSME 556 (580)
Q Consensus 511 la~~l~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~ 556 (580)
+.+.+..++.. +++++++.+.+ +...++.+.-+..+.+...++.
T Consensus 317 l~~~~~yll~h--~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~ 363 (373)
T COG4641 317 LKEKLKYLLNH--PDERKEIAECAYERVLARHTYEERIFKLLNEIASIN 363 (373)
T ss_pred HHHHHHHHhcC--cchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 99999999997 55666666555 4456898888877777776643
No 146
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=93.27 E-value=1.2 Score=49.25 Aligned_cols=122 Identities=11% Similarity=0.021 Sum_probs=77.4
Q ss_pred cEEEEEccCc-----cccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHH--h
Q 008028 372 PLIGFIGRLE-----EQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKII--A 444 (580)
Q Consensus 372 ~~i~f~Grl~-----~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~--~ 444 (580)
.+++..|... +.+-...+++|++++ +.++++..++.. .. ...+.++....+.+... ++ .
T Consensus 298 ~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~~-------~~~p~Nv~i~~w~Pq~~---lL~hp 363 (507)
T PHA03392 298 VVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-EA-------INLPANVLTQKWFPQRA---VLKHK 363 (507)
T ss_pred EEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-Cc-------ccCCCceEEecCCCHHH---HhcCC
Confidence 5667777753 233456677777666 467766655431 11 23456676666655443 67 4
Q ss_pred cCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEecCceeEEEeecccccccCCc--ccHHHHHHHHHHH
Q 008028 445 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKEGITGFQMRSFHVECDRVDL--ADVAAIAKHVNRA 518 (580)
Q Consensus 445 ~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~~~~~~~~~~~~v~~--~d~~~la~~l~~l 518 (580)
.++++|. -+-..+.+||+.+|+|+|+-...+ ...-+.+.+.|..+ +. -+.+.+.++|.++
T Consensus 364 ~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l----------~~~~~t~~~l~~ai~~v 429 (507)
T PHA03392 364 NVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRAL----------DTVTVSAAQLVLAIVDV 429 (507)
T ss_pred CCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEe----------ccCCcCHHHHHHHHHHH
Confidence 5888883 244567999999999998877543 22223344566655 33 3678999999999
Q ss_pred HHh
Q 008028 519 VAT 521 (580)
Q Consensus 519 l~~ 521 (580)
+++
T Consensus 430 l~~ 432 (507)
T PHA03392 430 IEN 432 (507)
T ss_pred hCC
Confidence 985
No 147
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=92.67 E-value=0.37 Score=40.37 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=58.4
Q ss_pred EEEEecCChhhHHHHHHHHHHCCCCeeEe---ccCChHH--HHHHHhcCCEEEecCCC---CCccHHHHHHHHcCCceEE
Q 008028 403 IVVLGTGKKPMEQQIEQLEIICPEKARGI---TKFSTPL--AHKIIAGADFMLVPSRF---EPCGLIQLHAMRYGTVPIV 474 (580)
Q Consensus 403 lii~G~g~~~~~~~i~~l~~~~~~~v~~~---~~~~~~~--~~~~~~~aDi~l~ps~~---E~~g~~~lEAma~G~PvI~ 474 (580)
++|+|.- +.+...++++..+++.++..+ ..+.... .+..+..+|++|++..+ ..+-.+--+|-.+|+|++.
T Consensus 2 vliVGG~-~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGR-EDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCC-cccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 5677752 226778888888888777777 5555554 67789999999998765 3455567788999999999
Q ss_pred cCCCCcce
Q 008028 475 ASTGGLFD 482 (580)
Q Consensus 475 s~~gg~~e 482 (580)
+...|+..
T Consensus 81 ~~~~~~~~ 88 (97)
T PF10087_consen 81 SRSRGVSS 88 (97)
T ss_pred ECCCCHHH
Confidence 98766554
No 148
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=92.06 E-value=0.79 Score=42.57 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=46.0
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHcccc
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEE 305 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~ 305 (580)
+||+||.+|...+......++.. +...+..+ .++-++.. .. -.| ....+|..++.|+++++++.+
T Consensus 89 ~PD~IIsThp~~~~~~l~~lk~~----~~~~~~p~~tvvTD~~~-~H---~~W---~~~~~D~y~Vase~~~~~l~~--- 154 (169)
T PF06925_consen 89 QPDLIISTHPFPAQVPLSRLKRR----GRLPNIPVVTVVTDFDT-VH---PFW---IHPGVDRYFVASEEVKEELIE--- 154 (169)
T ss_pred CCCEEEECCcchhhhHHHHHHHh----hcccCCcEEEEEcCCCC-CC---cCe---ecCCCCEEEECCHHHHHHHHH---
Confidence 79988888976655512233333 22222232 11112210 00 011 245899999999999999997
Q ss_pred CCcchhhhhhcCCeeEec
Q 008028 306 KGVELDNIIRKTGISGIV 323 (580)
Q Consensus 306 ~g~~~~~~~~~~~i~~I~ 323 (580)
+|++.+++ .+++||
T Consensus 155 ~Gi~~~~I----~vtGiP 168 (169)
T PF06925_consen 155 RGIPPERI----HVTGIP 168 (169)
T ss_pred cCCChhHE----EEeCcc
Confidence 89998854 444444
No 149
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=91.97 E-value=5.9 Score=39.16 Aligned_cols=196 Identities=17% Similarity=0.179 Sum_probs=99.2
Q ss_pred CCCceEEEecCCccchHHHHHHHhhhccCccccceEEEcCCCCCCCCCccchHHHHHHhcCceeEeeCHHHHHHHHcccc
Q 008028 226 YGEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKRLCRPRYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEE 305 (580)
Q Consensus 226 ~~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~ 305 (580)
+.||.+|.| ...++.+..++++.++ ..+++.+- ++... .+..|.|+..-.+..++...
T Consensus 69 ~~Pdl~I~a-Grrta~l~~~lkk~~~------~~~vVqI~--~Prlp----------~~~fDlvivp~HD~~~~~s~--- 126 (329)
T COG3660 69 QRPDLIITA-GRRTAPLAFYLKKKFG------GIKVVQIQ--DPRLP----------YNHFDLVIVPYHDWREELSD--- 126 (329)
T ss_pred CCCceEEec-ccchhHHHHHHHHhcC------CceEEEee--CCCCC----------cccceEEeccchhhhhhhhc---
Confidence 369966655 6788889899988754 22331111 11111 22467777766655555321
Q ss_pred CCcchhhhhhcCCeeEecCCCCCCCcCCCCccccccccCchhhhccchHHHHHHHHHcCCCCCCCCcEEEEEccCccccC
Q 008028 306 KGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLVKEALQSQLGLPVDRNIPLIGFIGRLEEQKG 385 (580)
Q Consensus 306 ~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~i~f~Grl~~~Kg 385 (580)
.|. +++ ++...+|-|......+. .++++... | .+..++-+++|.-...-.
T Consensus 127 ~~~---Nil---pi~Gs~h~Vt~~~lAa~---------------------~e~~~~~~--p-~~rq~vAVlVGg~nk~f~ 176 (329)
T COG3660 127 QGP---NIL---PINGSPHNVTSQRLAAL---------------------REAFKHLL--P-LPRQRVAVLVGGNNKAFV 176 (329)
T ss_pred cCC---cee---eccCCCCcccHHHhhhh---------------------HHHHHhhC--C-CCCceEEEEecCCCCCCc
Confidence 221 111 34444444433222211 34444333 2 245578889986544332
Q ss_pred H--HH---HHHHHhh-hcCCCeEEEEEecC--ChhhHHHHHHHHHHCCCCeeEec--cCChHHHHHHHhcCCEEEecCCC
Q 008028 386 S--DI---LAQAIPK-FMGGNVQIVVLGTG--KKPMEQQIEQLEIICPEKARGIT--KFSTPLAHKIIAGADFMLVPSRF 455 (580)
Q Consensus 386 ~--~~---ll~a~~~-l~~~~v~lii~G~g--~~~~~~~i~~l~~~~~~~v~~~~--~~~~~~~~~~~~~aDi~l~ps~~ 455 (580)
+ |. +..++.+ +.+....|++--.- ++..+..++.--...+.-+.... .+++.. .+++.||.++.+-.
T Consensus 177 ~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~--~~La~Adyii~TaD- 253 (329)
T COG3660 177 FQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYI--DMLAAADYIISTAD- 253 (329)
T ss_pred cCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchH--HHHhhcceEEEecc-
Confidence 2 22 2333322 22256666665542 33444444432222221111111 234332 48999999998754
Q ss_pred CCccHHHHHHHHcCCceEEcCCC
Q 008028 456 EPCGLIQLHAMRYGTVPIVASTG 478 (580)
Q Consensus 456 E~~g~~~lEAma~G~PvI~s~~g 478 (580)
+=...-||.+.|+||.+....
T Consensus 254 --SinM~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 254 --SINMCSEAASTGKPVFILEPP 274 (329)
T ss_pred --hhhhhHHHhccCCCeEEEecC
Confidence 334578999999998765543
No 150
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=90.44 E-value=2.7 Score=43.53 Aligned_cols=112 Identities=21% Similarity=0.252 Sum_probs=68.3
Q ss_pred HHHHHHHcCCCCCCCCcEE-EEEcc-CccccCHH--HHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCee-E
Q 008028 356 KEALQSQLGLPVDRNIPLI-GFIGR-LEEQKGSD--ILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKAR-G 430 (580)
Q Consensus 356 ~~~~~~~~glp~~~~~~~i-~f~Gr-l~~~Kg~~--~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~-~ 430 (580)
.+.+...++++ ++.++| +..|. ..+.|.+. ...+.++.+.+.+.++++.|...+ ++..+++....+..++ .
T Consensus 161 ~~~~~~~~~~~--~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l 236 (334)
T TIGR02195 161 QAAALAKFGLD--TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD--HPAGNEIEALLPGELRNL 236 (334)
T ss_pred HHHHHHHcCCC--CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh--HHHHHHHHHhCCcccccC
Confidence 34455566664 233444 45554 45677655 677777777656789999987652 3334445444443333 2
Q ss_pred eccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 431 ITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 431 ~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
.+..+-.++..+++.||++|-+- .|..=+ |.+.|+|+|+--
T Consensus 237 ~g~~sL~el~ali~~a~l~I~~D----SGp~Hl-AaA~~~P~i~lf 277 (334)
T TIGR02195 237 AGETSLDEAVDLIALAKAVVTND----SGLMHV-AAALNRPLVALY 277 (334)
T ss_pred CCCCCHHHHHHHHHhCCEEEeeC----CHHHHH-HHHcCCCEEEEE
Confidence 24445566778999999999653 343333 778999988644
No 151
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=88.97 E-value=3.6 Score=40.46 Aligned_cols=102 Identities=18% Similarity=0.103 Sum_probs=60.0
Q ss_pred CCcEEEEEccCccccCHHH--HHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCC-eeEeccCChHHHHHHHhcC
Q 008028 370 NIPLIGFIGRLEEQKGSDI--LAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEK-ARGITKFSTPLAHKIIAGA 446 (580)
Q Consensus 370 ~~~~i~f~Grl~~~Kg~~~--ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~-v~~~~~~~~~~~~~~~~~a 446 (580)
+..++++.|.-.+.|.+.. ..+.+++|.+...+++++|...+..++.++++....+.+ +...+..+-.+...+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 3346666776668887554 778888887766889999987644344455555443322 3333455667777899999
Q ss_pred CEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 447 DFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 447 Di~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
|++|-+- .|..=+ |.+.|+|+|+--
T Consensus 185 ~~~I~~D----tg~~Hl-A~a~~~p~v~lf 209 (247)
T PF01075_consen 185 DLVIGND----TGPMHL-AAALGTPTVALF 209 (247)
T ss_dssp SEEEEES----SHHHHH-HHHTT--EEEEE
T ss_pred CEEEecC----ChHHHH-HHHHhCCEEEEe
Confidence 9999663 344433 788999988764
No 152
>PLN02448 UDP-glycosyltransferase family protein
Probab=88.75 E-value=7.4 Score=42.46 Aligned_cols=133 Identities=14% Similarity=0.063 Sum_probs=71.7
Q ss_pred cEEEEEccCcc--ccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEE
Q 008028 372 PLIGFIGRLEE--QKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFM 449 (580)
Q Consensus 372 ~~i~f~Grl~~--~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~ 449 (580)
.+++..|.... .+-+..++++++.. +..++++..+.. ..+. ...+++.....+.++.. +++..++.
T Consensus 276 vvyvsfGs~~~~~~~~~~~~~~~l~~~---~~~~lw~~~~~~---~~~~---~~~~~~~~v~~w~pQ~~---iL~h~~v~ 343 (459)
T PLN02448 276 VLYVSLGSFLSVSSAQMDEIAAGLRDS---GVRFLWVARGEA---SRLK---EICGDMGLVVPWCDQLK---VLCHSSVG 343 (459)
T ss_pred eEEEeecccccCCHHHHHHHHHHHHhC---CCCEEEEEcCch---hhHh---HhccCCEEEeccCCHHH---HhccCccc
Confidence 45666676532 22355566666554 667776655431 1111 11223444443333332 78887774
Q ss_pred EecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEec-CceeEEEeecccccccCCcccHHHHHHHHHHHHHh
Q 008028 450 LVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKE-GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 450 l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 521 (580)
.+-+. +--.+.+||+.+|+|+|+--..+ ....+.+ -+.|+.+..-.++ -+..+.+++++++.+++.+
T Consensus 344 ~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~---~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 344 GFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGE---ETLVGREEIAELVKRFMDL 415 (459)
T ss_pred eEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccccc---CCcCcHHHHHHHHHHHhcC
Confidence 43333 33458999999999999877543 2222222 1345554100000 0124678999999999975
No 153
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=88.64 E-value=25 Score=35.35 Aligned_cols=87 Identities=16% Similarity=0.273 Sum_probs=53.5
Q ss_pred EEEEEccCccccCHHHHHHHHhhhcCCCeEEE-EEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEe
Q 008028 373 LIGFIGRLEEQKGSDILAQAIPKFMGGNVQIV-VLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLV 451 (580)
Q Consensus 373 ~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~li-i~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ 451 (580)
+++..|. ...|+ +.++.++.|.+.++-+. ++|.+.+.+.+..+... +++ ++..+ .+.+.+..++..||..+.
T Consensus 161 ilI~lGG-sDpk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~-~~~-~i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGG-SDPKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAE-KYP-NINLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccC-CChhh--hHHHHHHHhhccCeeEEEEecCCCcchhHHHHHHh-hCC-CeeeE--ecchhHHHHHHhcchhee
Confidence 4555554 34454 45666666655555544 34666555555444443 443 24333 234445569999999885
Q ss_pred cCCCCCccHHHHHHHHcCCc
Q 008028 452 PSRFEPCGLIQLHAMRYGTV 471 (580)
Q Consensus 452 ps~~E~~g~~~lEAma~G~P 471 (580)
. -|.++.||...|+|
T Consensus 234 A-----aGstlyEa~~lgvP 248 (318)
T COG3980 234 A-----AGSTLYEALLLGVP 248 (318)
T ss_pred c-----cchHHHHHHHhcCC
Confidence 3 58899999999999
No 154
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=88.63 E-value=19 Score=37.58 Aligned_cols=102 Identities=13% Similarity=0.023 Sum_probs=63.5
Q ss_pred CcEEEEEccCccccCHH--HHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCC-CCee-EeccCChHHHHHHHhcC
Q 008028 371 IPLIGFIGRLEEQKGSD--ILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICP-EKAR-GITKFSTPLAHKIIAGA 446 (580)
Q Consensus 371 ~~~i~f~Grl~~~Kg~~--~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~-~~v~-~~~~~~~~~~~~~~~~a 446 (580)
..+++..|.-.+.|.+. ...+.++.|.+.+.+++++|...+.-.+..+++..... ..++ ..+..+-.++..+++.|
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 263 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHA 263 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhC
Confidence 35666777656777754 66777777765678999988654322233344443322 1232 23444566677899999
Q ss_pred CEEEecCCCCCccHHHHHHHHcCCceEEcCC
Q 008028 447 DFMLVPSRFEPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 447 Di~l~ps~~E~~g~~~lEAma~G~PvI~s~~ 477 (580)
|++|-+- .|..=+ |.+.|+|+|+--.
T Consensus 264 ~l~v~nD----SGp~Hl-AaA~g~P~v~lfG 289 (352)
T PRK10422 264 QLFIGVD----SAPAHI-AAAVNTPLICLFG 289 (352)
T ss_pred CEEEecC----CHHHHH-HHHcCCCEEEEEC
Confidence 9999653 344444 7789999886553
No 155
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=88.48 E-value=3.4 Score=42.52 Aligned_cols=117 Identities=15% Similarity=0.059 Sum_probs=71.8
Q ss_pred HHHHHHcCCCCCCCCcEEEEEccCcccc--CHH---HHHHHHhhhcC-CCeEEEEEecC--ChhhHHHHHHHHHHCCCCe
Q 008028 357 EALQSQLGLPVDRNIPLIGFIGRLEEQK--GSD---ILAQAIPKFMG-GNVQIVVLGTG--KKPMEQQIEQLEIICPEKA 428 (580)
Q Consensus 357 ~~~~~~~glp~~~~~~~i~f~Grl~~~K--g~~---~ll~a~~~l~~-~~v~lii~G~g--~~~~~~~i~~l~~~~~~~v 428 (580)
..|+.+++- .+...+.+.+|.=+.+. +.+ .|++.+..+.+ .+.++.|...- +++.++.+.++....+ .+
T Consensus 135 ~~~~~~~~~--l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~-~~ 211 (311)
T PF06258_consen 135 AAWAPRLAA--LPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNP-GV 211 (311)
T ss_pred Hhhhhhhcc--CCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCC-ce
Confidence 344444431 23334666777533222 222 56666665544 56788888773 4567777777765433 34
Q ss_pred eEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC
Q 008028 429 RGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG 479 (580)
Q Consensus 429 ~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg 479 (580)
.++..=..+-...+++.||.++++.. +=..+-||.+.|+||.+-...+
T Consensus 212 ~~~~~~~~nPy~~~La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 212 YIWDGTGENPYLGFLAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EEecCCCCCcHHHHHHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 23322222223459999999999864 4456899999999999988776
No 156
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=87.62 E-value=2.9 Score=41.92 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=57.8
Q ss_pred CCCcEEEEEccCccc-------cCHHHHHHHHhhhcC--CCeEEEEEecCCh---hhHHHHHHHHHHCCCCeeEeccCCh
Q 008028 369 RNIPLIGFIGRLEEQ-------KGSDILAQAIPKFMG--GNVQIVVLGTGKK---PMEQQIEQLEIICPEKARGITKFST 436 (580)
Q Consensus 369 ~~~~~i~f~Grl~~~-------Kg~~~ll~a~~~l~~--~~v~lii~G~g~~---~~~~~i~~l~~~~~~~v~~~~~~~~ 436 (580)
.+.+.|+++...... .....+++.+..+.+ ++.+|+|==-... .-...+.++.. .. ++.... - .
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~-~~~~~~-~-~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LP-NVVIID-D-D 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CC-CeEEEC-C-C
Confidence 466788888887654 233445555555543 4777776432210 01122222222 22 222221 1 2
Q ss_pred HHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCC
Q 008028 437 PLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTG 478 (580)
Q Consensus 437 ~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~g 478 (580)
--...++..||.++.- .+++++||+.+|+||++....
T Consensus 191 ~~~~~Ll~~s~~Vvti-----nStvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTI-----NSTVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred CCHHHHHHhCCEEEEE-----CCHHHHHHHHcCCceEEecCc
Confidence 2234589999988754 367999999999999997643
No 157
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=86.97 E-value=15 Score=37.54 Aligned_cols=98 Identities=17% Similarity=0.160 Sum_probs=62.3
Q ss_pred cEEEEEccCccccCH--HHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEE
Q 008028 372 PLIGFIGRLEEQKGS--DILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFM 449 (580)
Q Consensus 372 ~~i~f~Grl~~~Kg~--~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~ 449 (580)
.++++.|.=.+.|.+ +...+.++.+.+.+.++++.|.++. -.+..+++....+.. ...+..+-.++..+++.||++
T Consensus 181 ~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~~-~l~g~~sL~el~ali~~a~l~ 258 (319)
T TIGR02193 181 YAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPGA-VVLPKMSLAEVAALLAGADAV 258 (319)
T ss_pred EEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCCC-eecCCCCHHHHHHHHHcCCEE
Confidence 456666654577775 4677777777656788888864442 223344554444432 233555666777899999999
Q ss_pred EecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 450 LVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 450 l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
|-+- .|..=+ |.+.|+|+|+--
T Consensus 259 I~~D----Sgp~Hl-Aaa~g~P~i~lf 280 (319)
T TIGR02193 259 VGVD----TGLTHL-AAALDKPTVTLY 280 (319)
T ss_pred EeCC----ChHHHH-HHHcCCCEEEEE
Confidence 9653 344433 678899988754
No 158
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=86.91 E-value=15 Score=37.32 Aligned_cols=100 Identities=14% Similarity=0.048 Sum_probs=58.7
Q ss_pred cEEEEEccCc---cccCHHHHHHHHhhhcC-CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCC
Q 008028 372 PLIGFIGRLE---EQKGSDILAQAIPKFMG-GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGAD 447 (580)
Q Consensus 372 ~~i~f~Grl~---~~Kg~~~ll~a~~~l~~-~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aD 447 (580)
+.|++.-|-. ..+..+.+.+++..+.+ .+.+++++.-....-.+..+++....+.....+...+..+.-.+++.||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4666655431 22235577777877755 3677666554322234455556555443222234445666667999999
Q ss_pred EEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 448 FMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 448 i~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
+++ .+|+-+ .+=|+.+|+|+|+-.
T Consensus 253 ~vI-~~RlH~----~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVI-GMRLHA----LILAAAAGVPFVALS 276 (298)
T ss_pred EEE-EechHH----HHHHHHcCCCEEEee
Confidence 666 444332 556999999998654
No 159
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.70 E-value=13 Score=38.90 Aligned_cols=164 Identities=13% Similarity=0.199 Sum_probs=108.9
Q ss_pred EEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCC-----hhhHHHHHHHHHH-CCCCeeEeccCCh-----HHHHHH
Q 008028 374 IGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGK-----KPMEQQIEQLEII-CPEKARGITKFST-----PLAHKI 442 (580)
Q Consensus 374 i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~-----~~~~~~i~~l~~~-~~~~v~~~~~~~~-----~~~~~~ 442 (580)
|=|.|...+.+=..+..+.+++++++++.+||+-+.+ ..+-+++.+..+. .|+.++++.+-.. .++..+
T Consensus 157 iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aF 236 (483)
T KOG0780|consen 157 VPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAF 236 (483)
T ss_pred CeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHH
Confidence 4466788889999999999999999999999998743 3566666666664 3677888766532 334445
Q ss_pred HhcCCE--EEecCCC----CCccHHHHHHHHcCCceEEcCCCCcceeEecCc----eeEEEeecccccccCCcccHHHHH
Q 008028 443 IAGADF--MLVPSRF----EPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGI----TGFQMRSFHVECDRVDLADVAAIA 512 (580)
Q Consensus 443 ~~~aDi--~l~ps~~----E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~----~G~~~~~~~~~~~~v~~~d~~~la 512 (580)
-..+|+ ++++-.. -+..++..+ +.++|+|.-.+|-.-|.++.-. .+-++ --+|.+.+.
T Consensus 237 k~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~FvsrlL----------GmGDi~glv 304 (483)
T KOG0780|consen 237 KETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRLL----------GMGDIEGLV 304 (483)
T ss_pred HHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHHh----------ccccHHHHH
Confidence 555665 3444321 234455543 5799999988887666554321 12222 457888888
Q ss_pred HHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 008028 513 KHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLL 553 (580)
Q Consensus 513 ~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 553 (580)
+.+.++..+ .-.++.++-.+-+|+...+.+++..+..
T Consensus 305 ek~~ev~~~----d~~el~~kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 305 EKVQEVGKD----DAKELVEKLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHHHHhhh----hHHHHHHHHHhCCccHHHHHHHHHHHHh
Confidence 888887743 2234444445568999888888877654
No 160
>PLN02670 transferase, transferring glycosyl groups
Probab=85.07 E-value=17 Score=39.81 Aligned_cols=108 Identities=8% Similarity=-0.029 Sum_probs=61.0
Q ss_pred HHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEecCceeEEEeecccccccCCcccHHHHHHHHHH
Q 008028 442 IIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNR 517 (580)
Q Consensus 442 ~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ 517 (580)
+++...+..+-+. +--++.+||+.+|+|+|+--..+ ....+.+.+.|..+.....+ ..-+.+++.++|.+
T Consensus 352 IL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av~~ 425 (472)
T PLN02670 352 ILSHESVGGFLTH--CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESVRL 425 (472)
T ss_pred HhcCcccceeeec--CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHHHH
Confidence 7877777554443 22357999999999999876432 22233344566655100000 12468899999999
Q ss_pred HHHhcChhHHHHHHHHH---HHhcCCchHHHHHHHHHHHHH
Q 008028 518 AVATYGTPALKEMIQNC---MALDLSWKEPARLWEKMLLSM 555 (580)
Q Consensus 518 ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l 555 (580)
++.+..-.++++.+++. ++..=+....++.+.+.+.+.
T Consensus 426 vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 426 AMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 99752112333333222 334445555666666655544
No 161
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=83.85 E-value=7.2 Score=39.21 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=62.4
Q ss_pred EEEEEccCccccCH--HHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHC-CCCee-EeccCChHHHHHHHhcCCE
Q 008028 373 LIGFIGRLEEQKGS--DILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIIC-PEKAR-GITKFSTPLAHKIIAGADF 448 (580)
Q Consensus 373 ~i~f~Grl~~~Kg~--~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~-~~~v~-~~~~~~~~~~~~~~~~aDi 448 (580)
+++..|.-.+.|.+ +...+.++.+.+.+++++++|... -++..+++.... ..++. ..+..+-.+...+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 44455554555554 577888877766689999998754 234444444443 12222 2333445666789999999
Q ss_pred EEecCCCCCccHHHHHHHHcCCceEEcCCC
Q 008028 449 MLVPSRFEPCGLIQLHAMRYGTVPIVASTG 478 (580)
Q Consensus 449 ~l~ps~~E~~g~~~lEAma~G~PvI~s~~g 478 (580)
++-+- .|..=+ |.+.|+|+|+--..
T Consensus 202 ~I~~D----sg~~Hl-A~a~~~p~i~l~g~ 226 (279)
T cd03789 202 VVTND----SGPMHL-AAALGTPTVALFGP 226 (279)
T ss_pred EEeeC----CHHHHH-HHHcCCCEEEEECC
Confidence 99664 355555 46899998776543
No 162
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=83.78 E-value=5.3 Score=43.23 Aligned_cols=42 Identities=24% Similarity=0.231 Sum_probs=28.8
Q ss_pred ceEEEEeec---------ccCccccccHHHHhccchHHHHhC--------CC----eEEEEEecC
Q 008028 85 MNLVFVGAE---------VAPWSKTGGLGDVLGGLPPALAAR--------GH----RVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e---------~~P~~~~GG~g~~~~~l~~aL~~~--------G~----~V~vi~~~y 128 (580)
.+|+++|.. -.|. +||--.++.++++||... |. +|.++|-.-
T Consensus 273 f~vvliSpHG~f~q~nvLG~pD--TGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlI 335 (550)
T PF00862_consen 273 FNVVLISPHGYFGQENVLGRPD--TGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLI 335 (550)
T ss_dssp SEEEEE--SS--STTSTTSSTT--SSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--
T ss_pred EEEEEEcCccccccccccCCCC--CCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccc
Confidence 489999986 1265 899999999999999753 44 477777653
No 163
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=83.52 E-value=18 Score=37.60 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=60.8
Q ss_pred cEEEEEccCccccCH--HHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCC-Cee-EeccCChHHHHHHHhcCC
Q 008028 372 PLIGFIGRLEEQKGS--DILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPE-KAR-GITKFSTPLAHKIIAGAD 447 (580)
Q Consensus 372 ~~i~f~Grl~~~Kg~--~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~-~v~-~~~~~~~~~~~~~~~~aD 447 (580)
.+++..|.-.+.|.+ +...+.+++|.+++.+++++|...+.-....+++....+. ++. ..+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 455566654566664 4556666666556788999986542222233444333221 233 334456677778999999
Q ss_pred EEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 448 FMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 448 i~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
++|-+- .|..=+ |.|.|+|+|+--
T Consensus 263 l~Vs~D----SGp~Hl-AaA~g~p~v~Lf 286 (344)
T TIGR02201 263 LFIGVD----SVPMHM-AAALGTPLVALF 286 (344)
T ss_pred EEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 999663 344444 888999988654
No 164
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=82.93 E-value=0.19 Score=46.45 Aligned_cols=81 Identities=12% Similarity=0.168 Sum_probs=45.7
Q ss_pred CeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcc--------eeEecCceeEEEeeccc
Q 008028 427 KARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLF--------DTVKEGITGFQMRSFHV 498 (580)
Q Consensus 427 ~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~--------e~i~~~~~G~~~~~~~~ 498 (580)
++..+. |..+ +..+++.||+++.- +-+.++.|++++|+|.|.-...+.. ..+.+...+..+. .
T Consensus 56 ~v~~~~-~~~~-m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~---~ 126 (167)
T PF04101_consen 56 NVKVFG-FVDN-MAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLD---E 126 (167)
T ss_dssp CCEEEC-SSSS-HHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSE---C
T ss_pred cEEEEe-chhh-HHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccC---c
Confidence 454444 4333 44599999988832 3457899999999998876655521 1122323333320 0
Q ss_pred ccccCCcccHHHHHHHHHHHHHh
Q 008028 499 ECDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 499 ~~~~v~~~d~~~la~~l~~ll~~ 521 (580)
...+.+.+.++|..++.+
T Consensus 127 -----~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 127 -----SELNPEELAEAIEELLSD 144 (167)
T ss_dssp -----CC-SCCCHHHHHHCHCCC
T ss_pred -----ccCCHHHHHHHHHHHHcC
Confidence 223467788999888886
No 165
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=81.78 E-value=14 Score=38.44 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=57.6
Q ss_pred EEEEEcc-CccccCHH--HHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCC----CeeEe-ccCChHHHHHHHh
Q 008028 373 LIGFIGR-LEEQKGSD--ILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPE----KARGI-TKFSTPLAHKIIA 444 (580)
Q Consensus 373 ~i~f~Gr-l~~~Kg~~--~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~----~v~~~-~~~~~~~~~~~~~ 444 (580)
+++..|. ..+.|.+. ...+.++.|.+.+++++++|...+ ++..+++....+. ++..+ +..+-.++..+++
T Consensus 183 i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e--~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~ 260 (348)
T PRK10916 183 IGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIA 260 (348)
T ss_pred EEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHh--HHHHHHHHHhcccccccceeeccCCCCHHHHHHHHH
Confidence 4445544 34677643 566666666556789999886542 2233443333221 22222 3345566667999
Q ss_pred cCCEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 445 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 445 ~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
.||++|-+- .|..=+ |.+.|+|+|+--
T Consensus 261 ~a~l~I~nD----TGp~Hl-AaA~g~P~valf 287 (348)
T PRK10916 261 ACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_pred hCCEEEecC----ChHHHH-HHHhCCCEEEEE
Confidence 999999653 344433 888999987644
No 166
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=81.47 E-value=11 Score=39.24 Aligned_cols=100 Identities=22% Similarity=0.186 Sum_probs=68.3
Q ss_pred cEEEEEc-cCccccCHH--HHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCE
Q 008028 372 PLIGFIG-RLEEQKGSD--ILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADF 448 (580)
Q Consensus 372 ~~i~f~G-rl~~~Kg~~--~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi 448 (580)
.+++..| .....|++. ...+.++.+.+...++++.|.. +-.+..+++...+++.+...+.-.-.++..++++||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 3556666 555777754 6777777776667899999977 3566677777776643333444445566679999999
Q ss_pred EEecCCCCCccHHHHHHHHcCCceEEcCCC
Q 008028 449 MLVPSRFEPCGLIQLHAMRYGTVPIVASTG 478 (580)
Q Consensus 449 ~l~ps~~E~~g~~~lEAma~G~PvI~s~~g 478 (580)
+|-+. .|..=+ |.+.|+|+|+--..
T Consensus 255 ~I~~D----Sg~~Hl-AaA~~~P~I~iyg~ 279 (334)
T COG0859 255 VIGND----SGPMHL-AAALGTPTIALYGP 279 (334)
T ss_pred EEccC----ChHHHH-HHHcCCCEEEEECC
Confidence 88664 355444 88899998886633
No 167
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=79.75 E-value=39 Score=31.40 Aligned_cols=67 Identities=18% Similarity=0.134 Sum_probs=43.9
Q ss_pred CCceEEEecCCccchHHHHHHHhhhccCccccceE-EE--cCCCCCCCCCccchHH-HHHHhcCceeEeeCHHHHHHHH
Q 008028 227 GEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKR-LC--RPRYDKPVKGRKINWM-KAGILESDRVLTVSPHYAKELI 301 (580)
Q Consensus 227 ~pDvVih~~~~~~~~l~~~l~~~~~~~gi~~~~~~-~~--l~~~~~~~~~~~~~~~-~~~~~~ad~vi~vS~~~~~~l~ 301 (580)
+|| |+.+|...+++..+++.+++...++. ..++ |. +-+.... .+. |.....||.+++.-+++++...
T Consensus 92 rPd-vii~nGpg~~vp~~~~~~l~~~~~~~-~~kiIyIES~aRv~~l------SlTGklly~~aD~f~VQW~~l~~~yp 162 (170)
T PF08660_consen 92 RPD-VIISNGPGTCVPVCLAAKLLRLLGLR-GSKIIYIESFARVKTL------SLTGKLLYPFADRFIVQWEELAEKYP 162 (170)
T ss_pred CCC-EEEEcCCceeeHHHHHHHHHHHhhcc-CCcEEEEEeeeecCCC------chHHHHHHHhCCEEEEcCHHHHhHCC
Confidence 699 88898888888888887777544444 3344 32 1111111 111 4456679999999999888764
No 168
>PLN02562 UDP-glycosyltransferase
Probab=77.40 E-value=41 Score=36.53 Aligned_cols=129 Identities=6% Similarity=-0.017 Sum_probs=73.7
Q ss_pred cEEEEEccCc---cccCHHHHHHHHhhhcCCCeEEEE-EecCCh-hhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcC
Q 008028 372 PLIGFIGRLE---EQKGSDILAQAIPKFMGGNVQIVV-LGTGKK-PMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGA 446 (580)
Q Consensus 372 ~~i~f~Grl~---~~Kg~~~ll~a~~~l~~~~v~lii-~G~g~~-~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~a 446 (580)
.+++..|... +.+-+..++.+++.+ +.+|+. +..+.. .+.+ .+....++++....+.++.. +++.+
T Consensus 275 vvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~---~~~~~~~~~~~v~~w~PQ~~---iL~h~ 345 (448)
T PLN02562 275 VIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPP---GYVERVSKQGKVVSWAPQLE---VLKHQ 345 (448)
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCH---HHHHHhccCEEEEecCCHHH---HhCCC
Confidence 4666777643 455566777777766 335443 332211 1211 12222234454444444433 78887
Q ss_pred CEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEec-CceeEEEeecccccccCCcccHHHHHHHHHHHHHh
Q 008028 447 DFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKE-GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 447 Di~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 521 (580)
++.++-+. +--.+.+||+.+|+|+|+--..+ ....+.+ -+.|+-+ ...+.++++++|.+++++
T Consensus 346 ~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~~ 413 (448)
T PLN02562 346 AVGCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVMED 413 (448)
T ss_pred ccceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhCC
Confidence 76554443 22357999999999998766432 3333333 2455544 445788999999999974
No 169
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=77.20 E-value=24 Score=38.47 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=53.8
Q ss_pred HHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCc-eEEcC--CCCcceeEecCceeEEEeecccccccCCcccHHHHHH
Q 008028 437 PLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTV-PIVAS--TGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAK 513 (580)
Q Consensus 437 ~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~P-vI~s~--~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~ 513 (580)
....++++.+-++|.|+-+++..-.++||+.+||. ||.++ ...+.+.+.-..-++.+ +..++...
T Consensus 335 ~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v----------~~~~v~~~-- 402 (464)
T KOG1021|consen 335 LNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFV----------PEKDVPEL-- 402 (464)
T ss_pred chHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEE----------EHHHhhhH--
Confidence 34456899999999999998888899999999986 55555 23344444333344443 32333333
Q ss_pred HHHHHHHhcChhHHHHHHHHH
Q 008028 514 HVNRAVATYGTPALKEMIQNC 534 (580)
Q Consensus 514 ~l~~ll~~~~~~~~~~~~~~~ 534 (580)
|.++|......+...|.++.
T Consensus 403 -~~~iL~~i~~~~~~~m~~~v 422 (464)
T KOG1021|consen 403 -IKNILLSIPEEEVLRMRENV 422 (464)
T ss_pred -HHHHHHhcCHHHHHHHHHHH
Confidence 56666654445555555554
No 170
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=75.63 E-value=38 Score=36.84 Aligned_cols=133 Identities=14% Similarity=0.038 Sum_probs=69.0
Q ss_pred cEEEEEccCc--cccCHHHHHHHHhhhcCCCeEEEEEec-C----ChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHh
Q 008028 372 PLIGFIGRLE--EQKGSDILAQAIPKFMGGNVQIVVLGT-G----KKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIA 444 (580)
Q Consensus 372 ~~i~f~Grl~--~~Kg~~~ll~a~~~l~~~~v~lii~G~-g----~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~ 444 (580)
-+++..|.+. ..+-+..+..+++.. +..|+.+=. + .+.....-..+..+.+++.....+.++.. +++
T Consensus 266 VvyvsfGS~~~~~~~q~~ela~gLe~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~---iL~ 339 (451)
T PLN02410 266 VIFVSLGSLALMEINEVMETASGLDSS---NQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKE---VLS 339 (451)
T ss_pred EEEEEccccccCCHHHHHHHHHHHHhc---CCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHH---HhC
Confidence 4566667654 234455566666554 224443322 2 11100111222223334444444333333 788
Q ss_pred cCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEecC-ceeEEEeecccccccCCcccHHHHHHHHHHHH
Q 008028 445 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKEG-ITGFQMRSFHVECDRVDLADVAAIAKHVNRAV 519 (580)
Q Consensus 445 ~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll 519 (580)
..++-.+-+. +--++.+||+.+|+|+|+--..+ ....+.+. +.|.-+. ..-+.++++++|.+++
T Consensus 340 h~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av~~lm 408 (451)
T PLN02410 340 HPAVGGFWSH--CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAVKRLM 408 (451)
T ss_pred CCccCeeeec--CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHHHHHH
Confidence 7666433332 22257999999999998866432 22222222 4555441 2347789999999999
Q ss_pred Hh
Q 008028 520 AT 521 (580)
Q Consensus 520 ~~ 521 (580)
.+
T Consensus 409 ~~ 410 (451)
T PLN02410 409 VE 410 (451)
T ss_pred cC
Confidence 75
No 171
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=74.09 E-value=4.1 Score=38.21 Aligned_cols=34 Identities=26% Similarity=0.512 Sum_probs=28.2
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
|||++|++ +|-+|. .+++++.++||+|+.|.-..
T Consensus 1 mKIaiIgA-------sG~~Gs---~i~~EA~~RGHeVTAivRn~ 34 (211)
T COG2910 1 MKIAIIGA-------SGKAGS---RILKEALKRGHEVTAIVRNA 34 (211)
T ss_pred CeEEEEec-------CchhHH---HHHHHHHhCCCeeEEEEeCh
Confidence 89999997 366665 67899999999999998764
No 172
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=74.09 E-value=1.2e+02 Score=31.73 Aligned_cols=136 Identities=13% Similarity=0.161 Sum_probs=70.9
Q ss_pred CcEEEEEccCccccCHHHH---HHHHhhhcC-CCeEEEEEecCC-hhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhc
Q 008028 371 IPLIGFIGRLEEQKGSDIL---AQAIPKFMG-GNVQIVVLGTGK-KPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAG 445 (580)
Q Consensus 371 ~~~i~f~Grl~~~Kg~~~l---l~a~~~l~~-~~v~lii~G~g~-~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 445 (580)
..+++.+|.= .-|.+++ ++|...+.. ...-++|.|.-- ..-.+++...+.+.+ ++..+ .|..+. ..++++
T Consensus 220 ~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p-~i~I~-~f~~~~-~~ll~g 294 (400)
T COG4671 220 FDILVSVGGG--ADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRP-HISIF-EFRNDF-ESLLAG 294 (400)
T ss_pred ceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCC-CeEEE-EhhhhH-HHHHHh
Confidence 3567777753 3344443 444433322 122356666643 333444444444433 34443 344443 349999
Q ss_pred CCEEEecCCCCCccHHHHHHHHcCCceEEcC-CCCcceeEec----CceeEEEeecccccccCCcccHHHHHHHHHHHHH
Q 008028 446 ADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLFDTVKE----GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 446 aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~-~gg~~e~i~~----~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
|+..|.-.- =++..|-+..|+|.+.-. .-+-.|-... .+-|++= .-.-+.-+++.++++|..+++
T Consensus 295 A~~vVSm~G----YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~d------vL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 295 ARLVVSMGG----YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVD------VLLPENLTPQNLADALKAALA 364 (400)
T ss_pred hheeeeccc----chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcce------eeCcccCChHHHHHHHHhccc
Confidence 999984432 246889999999955444 2222222111 1223320 001144568888888888887
Q ss_pred h
Q 008028 521 T 521 (580)
Q Consensus 521 ~ 521 (580)
-
T Consensus 365 ~ 365 (400)
T COG4671 365 R 365 (400)
T ss_pred C
Confidence 3
No 173
>PLN02554 UDP-glycosyltransferase family protein
Probab=73.95 E-value=37 Score=37.25 Aligned_cols=141 Identities=9% Similarity=0.015 Sum_probs=68.4
Q ss_pred cEEEEEccCc--cccCHHHHHHHHhhhcCCCeEEEEEecCC------------hhhHHH-HHHHHHHCCCCeeEeccCCh
Q 008028 372 PLIGFIGRLE--EQKGSDILAQAIPKFMGGNVQIVVLGTGK------------KPMEQQ-IEQLEIICPEKARGITKFST 436 (580)
Q Consensus 372 ~~i~f~Grl~--~~Kg~~~ll~a~~~l~~~~v~lii~G~g~------------~~~~~~-i~~l~~~~~~~v~~~~~~~~ 436 (580)
.+++..|.+. ..+-+..++.+++.+ +.+|+.+-+.+ ...... -..+..+.+++.....+.++
T Consensus 276 vvyvsfGS~~~~~~~~~~~la~~l~~~---~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ 352 (481)
T PLN02554 276 VVFLCFGSMGGFSEEQAREIAIALERS---GHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQ 352 (481)
T ss_pred EEEEeccccccCCHHHHHHHHHHHHHc---CCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCH
Confidence 3556667653 244667777777765 34554442210 000111 11222222234434443333
Q ss_pred HHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cc-eeEecCceeEEEee-ccccc--ccCCcccH
Q 008028 437 PLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LF-DTVKEGITGFQMRS-FHVEC--DRVDLADV 508 (580)
Q Consensus 437 ~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~-e~i~~~~~G~~~~~-~~~~~--~~v~~~d~ 508 (580)
.. +++...+-.+-+. +--.+.+||+.+|+|+|+--..+ .. ..+.+-+.|..+.. ...+- ..-..-+.
T Consensus 353 ~~---iL~H~~v~~FvtH--~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~ 427 (481)
T PLN02554 353 VA---VLAKPAIGGFVTH--CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTA 427 (481)
T ss_pred HH---HhCCcccCccccc--CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcH
Confidence 32 6744444332232 22357999999999999876432 22 12233345655420 00000 00012367
Q ss_pred HHHHHHHHHHHH
Q 008028 509 AAIAKHVNRAVA 520 (580)
Q Consensus 509 ~~la~~l~~ll~ 520 (580)
+++.++|.+++.
T Consensus 428 e~l~~av~~vm~ 439 (481)
T PLN02554 428 EEIERGIRCLME 439 (481)
T ss_pred HHHHHHHHHHhc
Confidence 899999999996
No 174
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=73.86 E-value=7 Score=34.25 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=27.9
Q ss_pred HHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCc
Q 008028 439 AHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL 480 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~ 480 (580)
+..++..+|+++--|.-+..--.+-.++.+|+|+|+.-+|.-
T Consensus 61 l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~ 102 (124)
T PF01113_consen 61 LEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFS 102 (124)
T ss_dssp HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSH
T ss_pred HHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCC
Confidence 456788899999777655544457778888999888777653
No 175
>PLN03007 UDP-glucosyltransferase family protein
Probab=73.71 E-value=52 Score=36.14 Aligned_cols=139 Identities=12% Similarity=-0.021 Sum_probs=69.9
Q ss_pred cEEEEEccCcc--ccCHHHHHHHHhhhcCCCeEEEE-EecCCh--hhHHHH-HHHHHH-CCCCeeEeccCChHHHHHHHh
Q 008028 372 PLIGFIGRLEE--QKGSDILAQAIPKFMGGNVQIVV-LGTGKK--PMEQQI-EQLEII-CPEKARGITKFSTPLAHKIIA 444 (580)
Q Consensus 372 ~~i~f~Grl~~--~Kg~~~ll~a~~~l~~~~v~lii-~G~g~~--~~~~~i-~~l~~~-~~~~v~~~~~~~~~~~~~~~~ 444 (580)
.+++..|.... .+.+..++++++.+ +..|+. ++.... .....+ +.+..+ .+.+++...+.++. .+++
T Consensus 287 vvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~---~iL~ 360 (482)
T PLN03007 287 VIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQV---LILD 360 (482)
T ss_pred eEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHH---HHhc
Confidence 46666777643 44455555665554 444443 343210 000000 111111 12234444444443 2788
Q ss_pred cCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEec-CceeEEEeec-c--cccccCCcccHHHHHHHHH
Q 008028 445 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKE-GITGFQMRSF-H--VECDRVDLADVAAIAKHVN 516 (580)
Q Consensus 445 ~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~~~~~~-~--~~~~~v~~~d~~~la~~l~ 516 (580)
.+++-++-+. +--++.+||+.+|+|+|+-...+ ....+.+ -..|+-++.- . .+- +.-+.++++++|.
T Consensus 361 h~~v~~fvtH--~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~---~~~~~~~l~~av~ 435 (482)
T PLN03007 361 HQATGGFVTH--CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKG---DFISREKVEKAVR 435 (482)
T ss_pred cCccceeeec--CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccccccc---CcccHHHHHHHHH
Confidence 8887444443 22357999999999999877532 1111111 1344433200 0 000 2246789999999
Q ss_pred HHHHh
Q 008028 517 RAVAT 521 (580)
Q Consensus 517 ~ll~~ 521 (580)
+++.+
T Consensus 436 ~~m~~ 440 (482)
T PLN03007 436 EVIVG 440 (482)
T ss_pred HHhcC
Confidence 99975
No 176
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=72.57 E-value=20 Score=39.36 Aligned_cols=127 Identities=12% Similarity=0.074 Sum_probs=69.0
Q ss_pred CCcEEEEEccCcc---ccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcC
Q 008028 370 NIPLIGFIGRLEE---QKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGA 446 (580)
Q Consensus 370 ~~~~i~f~Grl~~---~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~a 446 (580)
+..+++..|.+.. .+-...++++++++ +.+++..-++.. ...+ +.++....+.++. .+++..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~---~~~~iW~~~~~~-----~~~l----~~n~~~~~W~PQ~---~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL---PQRFIWKYEGEP-----PENL----PKNVLIVKWLPQN---DLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS---TTEEEEEETCSH-----GCHH----HTTEEEESS--HH---HHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC---CCcccccccccc-----cccc----cceEEEeccccch---hhhhcc
Confidence 3456677787642 22245567777666 347776655531 1111 2345444444433 278766
Q ss_pred CEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHh
Q 008028 447 DFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 447 Di~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 521 (580)
.+-++-+. +--.+.+||+.+|+|+|+-..-| ....+.+.+.|..+. . ..-+.+.+.++|.+++++
T Consensus 341 ~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~-------~-~~~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 341 RVKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLD-------K-NDLTEEELRAAIREVLEN 409 (500)
T ss_dssp TEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEG-------G-GC-SHHHHHHHHHHHHHS
T ss_pred cceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEE-------e-cCCcHHHHHHHHHHHHhh
Confidence 66554443 33457999999999999976432 222333445566550 0 233568899999999996
No 177
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=72.55 E-value=34 Score=35.09 Aligned_cols=98 Identities=17% Similarity=0.153 Sum_probs=58.9
Q ss_pred EEEEEccCccccCHH--HHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEE
Q 008028 373 LIGFIGRLEEQKGSD--ILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFML 450 (580)
Q Consensus 373 ~i~f~Grl~~~Kg~~--~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l 450 (580)
+++..|.-.+.|.+. ...+.+..+.+.+.++++.|.++. -++..+++....+ .+...+..+-.+...+++.||++|
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l~I 258 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-EEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKAVV 258 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCEEE
Confidence 333445434556644 577777777556778888633332 2333444443332 233445566677778999999999
Q ss_pred ecCCCCCccHHHHHHHHcCCceEEcCC
Q 008028 451 VPSRFEPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 451 ~ps~~E~~g~~~lEAma~G~PvI~s~~ 477 (580)
-+- .|..=+ |.+.|+|+|+--.
T Consensus 259 ~nD----SGp~Hl-A~A~g~p~valfG 280 (322)
T PRK10964 259 SVD----TGLSHL-TAALDRPNITLYG 280 (322)
T ss_pred ecC----CcHHHH-HHHhCCCEEEEEC
Confidence 654 344444 8889999887553
No 178
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=71.61 E-value=16 Score=36.96 Aligned_cols=68 Identities=16% Similarity=0.259 Sum_probs=46.3
Q ss_pred HHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCC---CcceeEecCceeEEEeecccccccCCcccHHHHHHHH
Q 008028 439 AHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTG---GLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~g---g~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
..+.|+.+.+++.|.-..++..-++|||++||.+|....+ .+.+++.=....+.+ +..+...+-+.|
T Consensus 230 ~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v----------~~~~~~~l~~iL 299 (302)
T PF03016_consen 230 YMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRV----------PEADLPELPEIL 299 (302)
T ss_pred HHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEE----------CHHHHHHHHHHH
Confidence 4468999999999877767888899999999976665422 344445333445554 666665555554
Q ss_pred H
Q 008028 516 N 516 (580)
Q Consensus 516 ~ 516 (580)
.
T Consensus 300 ~ 300 (302)
T PF03016_consen 300 R 300 (302)
T ss_pred h
Confidence 3
No 179
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=70.32 E-value=4.4 Score=38.69 Aligned_cols=38 Identities=29% Similarity=0.392 Sum_probs=28.2
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYD 129 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~ 129 (580)
|||++....- . ...-+..|.++|++.||+|.|++|...
T Consensus 1 M~ILlTNDDG-i------~a~Gi~aL~~~L~~~g~~V~VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDG-I------DAPGIRALAKALSALGHDVVVVAPDSE 38 (196)
T ss_dssp SEEEEE-SS--T------TSHHHHHHHHHHTTTSSEEEEEEESSS
T ss_pred CeEEEEcCCC-C------CCHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 8999888762 1 223456889999888999999999864
No 180
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=70.10 E-value=4.9 Score=35.02 Aligned_cols=40 Identities=25% Similarity=0.256 Sum_probs=25.2
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||+|+-.- +.+..=-.+-...|+.++.++||+|.++++.
T Consensus 1 Mki~fvmDp---i~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMDP---IESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeCC---HHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 899999873 2211112344567999999999999999986
No 181
>PLN02167 UDP-glycosyltransferase family protein
Probab=69.79 E-value=84 Score=34.43 Aligned_cols=139 Identities=16% Similarity=0.025 Sum_probs=67.2
Q ss_pred cEEEEEccCc--cccCHHHHHHHHhhhcCCCeEEEEE-ecCChh----hHHHHHHHHHHCCCCeeEeccCChHHHHHHHh
Q 008028 372 PLIGFIGRLE--EQKGSDILAQAIPKFMGGNVQIVVL-GTGKKP----MEQQIEQLEIICPEKARGITKFSTPLAHKIIA 444 (580)
Q Consensus 372 ~~i~f~Grl~--~~Kg~~~ll~a~~~l~~~~v~lii~-G~g~~~----~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~ 444 (580)
.+++..|.+. ..+.+..++.+++.+ +..|+.+ +..... ....-..+..+..++.....+.++. . +++
T Consensus 282 vvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~-~--iL~ 355 (475)
T PLN02167 282 VVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQV-E--ILA 355 (475)
T ss_pred eEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHH-H--Hhc
Confidence 4556667653 344466677777665 4455533 321110 0000011111222223333332222 2 677
Q ss_pred cCCEEEecCCCCCcc-HHHHHHHHcCCceEEcCCCC----cce-eEecCceeEEEeec-ccccccCCcccHHHHHHHHHH
Q 008028 445 GADFMLVPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LFD-TVKEGITGFQMRSF-HVECDRVDLADVAAIAKHVNR 517 (580)
Q Consensus 445 ~aDi~l~ps~~E~~g-~~~lEAma~G~PvI~s~~gg----~~e-~i~~~~~G~~~~~~-~~~~~~v~~~d~~~la~~l~~ 517 (580)
...+-.+-+. || .+.+||+++|+|+|+-...+ ... .+..-+.|..+... ..+- -..-+.++++++|.+
T Consensus 356 h~~vg~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~--~~~~~~~~l~~av~~ 430 (475)
T PLN02167 356 HKAIGGFVSH---CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY--GEIVKADEIAGAVRS 430 (475)
T ss_pred CcccCeEEee---CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc--CCcccHHHHHHHHHH
Confidence 7554222222 33 47999999999998876432 111 12233456554100 0000 012367899999999
Q ss_pred HHHh
Q 008028 518 AVAT 521 (580)
Q Consensus 518 ll~~ 521 (580)
++..
T Consensus 431 ~m~~ 434 (475)
T PLN02167 431 LMDG 434 (475)
T ss_pred HhcC
Confidence 9974
No 182
>PLN02210 UDP-glucosyl transferase
Probab=69.53 E-value=68 Score=34.94 Aligned_cols=73 Identities=12% Similarity=0.138 Sum_probs=45.4
Q ss_pred HHhcCCEEEecCCCCCcc-HHHHHHHHcCCceEEcCCCC----cceeEec-CceeEEEeecccccccCCcccHHHHHHHH
Q 008028 442 IIAGADFMLVPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LFDTVKE-GITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 442 ~~~~aDi~l~ps~~E~~g-~~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
+++.+++..+-+. || .+.+||+.+|+|+|+-...+ ....+.+ -+.|..+..-..+ ..-+.+++++++
T Consensus 337 iL~h~~vg~FitH---~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av 409 (456)
T PLN02210 337 ILSHMAISCFVTH---CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCI 409 (456)
T ss_pred HhcCcCcCeEEee---CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHH
Confidence 7888875444443 33 47999999999999876532 2222333 3566655210000 124778999999
Q ss_pred HHHHHh
Q 008028 516 NRAVAT 521 (580)
Q Consensus 516 ~~ll~~ 521 (580)
.+++.+
T Consensus 410 ~~~m~~ 415 (456)
T PLN02210 410 EAVTEG 415 (456)
T ss_pred HHHhcC
Confidence 999975
No 183
>PLN03004 UDP-glycosyltransferase
Probab=69.38 E-value=54 Score=35.68 Aligned_cols=137 Identities=8% Similarity=-0.061 Sum_probs=73.4
Q ss_pred cEEEEEccCc--cccCHHHHHHHHhhhcCCCeEEEEEecCCh-------hhHHHH-HHHHHHCCC-CeeEeccCChHHHH
Q 008028 372 PLIGFIGRLE--EQKGSDILAQAIPKFMGGNVQIVVLGTGKK-------PMEQQI-EQLEIICPE-KARGITKFSTPLAH 440 (580)
Q Consensus 372 ~~i~f~Grl~--~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~-------~~~~~i-~~l~~~~~~-~v~~~~~~~~~~~~ 440 (580)
-+++..|... +.+....|..+++... ..|+.+=..+. .....+ ..+..+..+ +++...+.++..
T Consensus 272 VvyvsfGS~~~~~~~q~~ela~gL~~s~---~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~-- 346 (451)
T PLN03004 272 VVFLCFGSLGLFSKEQVIEIAVGLEKSG---QRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP-- 346 (451)
T ss_pred eEEEEecccccCCHHHHHHHHHHHHHCC---CCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH--
Confidence 4566667763 3555667777777652 34444433210 011101 122222222 344434444443
Q ss_pred HHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEec-CceeEEEeecccccccCCcccHHHHHHHH
Q 008028 441 KIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKE-GITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 441 ~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
+++.+++..+-+. +--++.+||+.+|+|+|+-...+ ....+.+ -+.|..+. ..+ . ..-+.++++++|
T Consensus 347 -iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~-~~~-~---~~~~~e~l~~av 418 (451)
T PLN03004 347 -VLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMN-ESE-T---GFVSSTEVEKRV 418 (451)
T ss_pred -HhCCCccceEecc--CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEec-CCc-C---CccCHHHHHHHH
Confidence 7999998555454 22357999999999998876432 2222322 25566551 000 0 123678999999
Q ss_pred HHHHHh
Q 008028 516 NRAVAT 521 (580)
Q Consensus 516 ~~ll~~ 521 (580)
.+++++
T Consensus 419 ~~vm~~ 424 (451)
T PLN03004 419 QEIIGE 424 (451)
T ss_pred HHHhcC
Confidence 999874
No 184
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=68.44 E-value=85 Score=34.42 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=31.0
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
.++|++|. +| .-|.-.=+.+|++.|+.+|+.|++++..+
T Consensus 9 ~~HVvl~P---fp---aqGHi~P~l~LAk~La~~G~~VTfv~T~~ 47 (477)
T PLN02863 9 GTHVLVFP---FP---AQGHMIPLLDLTHRLALRGLTITVLVTPK 47 (477)
T ss_pred CCEEEEec---Cc---ccchHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46788776 34 35666777899999999999999999865
No 185
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=67.55 E-value=16 Score=33.69 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=24.2
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||+++.+.+ .|..-..+..|...+ -|+++++|..
T Consensus 1 M~ILlle~y~-----ggSHk~~~~~L~~~~---~~~~~lltLP 35 (168)
T PF12038_consen 1 MRILLLEPYY-----GGSHKQWADGLAAHS---EHEWTLLTLP 35 (168)
T ss_pred CeEEEEcccc-----ccCHHHHHHHHHHhc---cCCEEEEEcC
Confidence 8999999763 444555555555554 5888998874
No 186
>PLN02173 UDP-glucosyl transferase family protein
Probab=65.54 E-value=1.4e+02 Score=32.56 Aligned_cols=87 Identities=6% Similarity=0.007 Sum_probs=51.3
Q ss_pred CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEecC-ceeEEEeeccccc
Q 008028 426 EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKEG-ITGFQMRSFHVEC 500 (580)
Q Consensus 426 ~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~~~~~~~~~~ 500 (580)
.++....+.++.. +++..++.++-++ +-.++.+||+++|+|+|+-..-+ ....+.+. +.|.-+. . ++.
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~-~-~~~ 389 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNKAIGCFMTH--CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK-A-EKE 389 (449)
T ss_pred CceEEeCCCCHHH---HhCCCccceEEec--CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe-e-ccc
Confidence 3455544433332 7888886665554 33468999999999999877432 11222222 4555441 0 000
Q ss_pred ccCCcccHHHHHHHHHHHHHh
Q 008028 501 DRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 501 ~~v~~~d~~~la~~l~~ll~~ 521 (580)
+ ..-+.+++++++.+++.+
T Consensus 390 ~--~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 390 S--GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred C--CcccHHHHHHHHHHHhcC
Confidence 0 012679999999999975
No 187
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=64.97 E-value=7.8 Score=34.09 Aligned_cols=28 Identities=36% Similarity=0.355 Sum_probs=22.2
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
++|--.=...++++|.++||+|.+.++.
T Consensus 8 t~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred ChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4666666678999999999999988874
No 188
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=64.13 E-value=10 Score=33.50 Aligned_cols=39 Identities=15% Similarity=0.115 Sum_probs=30.8
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeE-EEEEe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRV-MSVAP 126 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V-~vi~~ 126 (580)
|||+++... .|+ .+-.+.-..++++++.+.||+| .|+-.
T Consensus 1 m~~~iv~~~-~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf~ 40 (128)
T PRK00207 1 MRYAIAVTG-PAY--GTQQASSAYQFAQALLAEGHELVSVFFY 40 (128)
T ss_pred CEEEEEEcC-CCC--CCHHHHHHHHHHHHHHhCCCCeeEEEEe
Confidence 899998886 675 4666788889999999999995 55543
No 189
>PLN02764 glycosyltransferase family protein
Probab=63.64 E-value=1.6e+02 Score=32.03 Aligned_cols=40 Identities=20% Similarity=0.167 Sum_probs=32.0
Q ss_pred CCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
.+++|++|. +| .-|.-.-+.+|++.|+.+|+.|++++...
T Consensus 4 ~~~Hvvl~P---~p---aqGHi~P~l~LAk~La~~g~~vT~~tt~~ 43 (453)
T PLN02764 4 LKFHVLMYP---WF---ATGHMTPFLFLANKLAEKGHTVTFLLPKK 43 (453)
T ss_pred CCcEEEEEC---Cc---ccccHHHHHHHHHHHHhCCCEEEEEeCcc
Confidence 357888876 34 35777778899999999999999999864
No 190
>PLN02208 glycosyltransferase family protein
Probab=63.60 E-value=1.3e+02 Score=32.53 Aligned_cols=72 Identities=6% Similarity=0.050 Sum_probs=45.5
Q ss_pred HHhcCCEEEecCCCCCcc-HHHHHHHHcCCceEEcCCCC----cceeEec-CceeEEEeecccccccCCcccHHHHHHHH
Q 008028 442 IIAGADFMLVPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LFDTVKE-GITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 442 ~~~~aDi~l~ps~~E~~g-~~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
+++...+-++-++ || ++.+||+.+|+|+|+--.-+ ....+.+ -+.|..+.. .++ ..-+.++++++|
T Consensus 324 iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~-~~~----~~~~~~~l~~ai 395 (442)
T PLN02208 324 ILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSR-EKT----GWFSKESLSNAI 395 (442)
T ss_pred HhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecc-ccC----CcCcHHHHHHHH
Confidence 7888887665554 55 57999999999999876432 2222222 345555410 000 013678999999
Q ss_pred HHHHHh
Q 008028 516 NRAVAT 521 (580)
Q Consensus 516 ~~ll~~ 521 (580)
.+++++
T Consensus 396 ~~~m~~ 401 (442)
T PLN02208 396 KSVMDK 401 (442)
T ss_pred HHHhcC
Confidence 999975
No 191
>PLN00164 glucosyltransferase; Provisional
Probab=63.01 E-value=77 Score=34.80 Aligned_cols=74 Identities=15% Similarity=0.078 Sum_probs=44.2
Q ss_pred HHhcCCEEEecCCCCCcc-HHHHHHHHcCCceEEcCCCC----cceeE-ecCceeEEEeecccccccCCcccHHHHHHHH
Q 008028 442 IIAGADFMLVPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LFDTV-KEGITGFQMRSFHVECDRVDLADVAAIAKHV 515 (580)
Q Consensus 442 ~~~~aDi~l~ps~~E~~g-~~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l 515 (580)
+++.+++..+-+. || .+.+||+.+|+|+|+--.-+ ....+ ..-+.|..+..... .-+.-+.++++++|
T Consensus 352 iL~h~~vg~fvtH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~---~~~~~~~e~l~~av 425 (480)
T PLN00164 352 ILAHAAVGGFVTH---CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK---RDNFVEAAELERAV 425 (480)
T ss_pred HhcCcccCeEEee---cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc---cCCcCcHHHHHHHH
Confidence 7888886444443 33 57999999999998876432 22222 22345554410000 00113678999999
Q ss_pred HHHHHh
Q 008028 516 NRAVAT 521 (580)
Q Consensus 516 ~~ll~~ 521 (580)
.+++.+
T Consensus 426 ~~vm~~ 431 (480)
T PLN00164 426 RSLMGG 431 (480)
T ss_pred HHHhcC
Confidence 999975
No 192
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=62.97 E-value=49 Score=36.89 Aligned_cols=181 Identities=18% Similarity=0.093 Sum_probs=99.4
Q ss_pred HHHHcCCCCCCCCcEEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEec---CChhhHHHHHHHHHHCCCCeeEecc
Q 008028 359 LQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGT---GKKPMEQQIEQLEIICPEKARGITK 433 (580)
Q Consensus 359 ~~~~~glp~~~~~~~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~---g~~~~~~~i~~l~~~~~~~v~~~~~ 433 (580)
.|..+++|++ ..+++-+..+ +|==...++.+.++.+ ++-.|.+.-. |...+...+++++.+ +++|+|..-
T Consensus 749 ~r~~y~Lp~d--~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~-p~riifs~v 823 (966)
T KOG4626|consen 749 TRSQYGLPED--AVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLE-PDRIIFSPV 823 (966)
T ss_pred CCCCCCCCCC--eEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCC-ccceeeccc
Confidence 4667888743 3455555554 4544455555555443 6666666554 333455555555442 346666543
Q ss_pred CChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEe-----cCceeEEEeecccccccCCcccH
Q 008028 434 FSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVK-----EGITGFQMRSFHVECDRVDLADV 508 (580)
Q Consensus 434 ~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~-----~~~~G~~~~~~~~~~~~v~~~d~ 508 (580)
-..++--.-.+-+|+.+-++..-+ -++.++.+..|+|+|+-...-+..-+. .-+.|-++ ..+-
T Consensus 824 a~k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli-----------ak~~ 891 (966)
T KOG4626|consen 824 AAKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI-----------AKNR 891 (966)
T ss_pred cchHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-----------hhhH
Confidence 333222235677899998876543 356889999999988755322211111 11112221 2334
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHH---HHH--hcCCchHHHHHHHHHHHHHHhc
Q 008028 509 AAIAKHVNRAVATYGTPALKEMIQN---CMA--LDLSWKEPARLWEKMLLSMEVA 558 (580)
Q Consensus 509 ~~la~~l~~ll~~~~~~~~~~~~~~---~~~--~~fs~~~~a~~~~~~~~~l~~~ 558 (580)
++..+.-.++-.+ .+.+..+... .+. .-|+..+.++.+++.|.+..+.
T Consensus 892 eEY~~iaV~Latd--~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 892 EEYVQIAVRLATD--KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHHHHHHHHhhcC--HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 4444443444333 3333333322 222 2699999999999999998875
No 193
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=60.98 E-value=45 Score=31.25 Aligned_cols=97 Identities=20% Similarity=0.228 Sum_probs=60.9
Q ss_pred CHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCC-CeeEe-ccCChHHHHH----H-HhcCCEEEec---CC
Q 008028 385 GSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPE-KARGI-TKFSTPLAHK----I-IAGADFMLVP---SR 454 (580)
Q Consensus 385 g~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~-~v~~~-~~~~~~~~~~----~-~~~aDi~l~p---s~ 454 (580)
|.|++.+.++...+...++.++|..+...++..+.+..++|+ ++.+. +.|+..+... + -+++|++++- ++
T Consensus 33 G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~Pk 112 (177)
T TIGR00696 33 GPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPK 112 (177)
T ss_pred hHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcH
Confidence 889998998888777899999999888888899999999986 34444 3444332222 2 3478887764 23
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCCcceeE
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGGLFDTV 484 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg~~e~i 484 (580)
.|-+-....+ ....+++ -..||.-|+.
T Consensus 113 QE~~~~~~~~--~~~~~v~-~gvGg~fd~~ 139 (177)
T TIGR00696 113 QEIWMRNHRH--LKPDAVM-IGVGGSFDVF 139 (177)
T ss_pred hHHHHHHhHH--hCCCcEE-EEeceeeeec
Confidence 4443322111 1223233 3367766654
No 194
>PLN02555 limonoid glucosyltransferase
Probab=59.82 E-value=1.7e+02 Score=32.10 Aligned_cols=38 Identities=26% Similarity=0.278 Sum_probs=30.6
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
.+|++|. +| .-|.-.=+.+|++.|+.+|..|++++...
T Consensus 8 ~HVv~~P---fp---aqGHi~Pml~lA~~La~~G~~vT~v~T~~ 45 (480)
T PLN02555 8 VHVMLVS---FP---GQGHVNPLLRLGKLLASKGLLVTFVTTES 45 (480)
T ss_pred CEEEEEC---Cc---ccccHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 5788776 34 35677778899999999999999999864
No 195
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=59.77 E-value=42 Score=31.20 Aligned_cols=99 Identities=21% Similarity=0.313 Sum_probs=61.9
Q ss_pred ccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCC-CeeEe--ccCChHHHHHHH-----hcCCEEEecC-
Q 008028 383 QKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPE-KARGI--TKFSTPLAHKII-----AGADFMLVPS- 453 (580)
Q Consensus 383 ~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~-~v~~~--~~~~~~~~~~~~-----~~aDi~l~ps- 453 (580)
.-|.|++-+.+....+++.++.++|..++..++....+..++|+ ++.+. +.|+..+...++ +++|++++-.
T Consensus 31 v~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vglG 110 (172)
T PF03808_consen 31 VTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGLG 110 (172)
T ss_pred cCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECC
Confidence 56788888888877777899999999888888888899999985 34432 224444444333 5888887643
Q ss_pred --CCCCccHHHHHHHHcCCceEEcCCCCcceeE
Q 008028 454 --RFEPCGLIQLHAMRYGTVPIVASTGGLFDTV 484 (580)
Q Consensus 454 --~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i 484 (580)
+.|-+-..... ..-+.+.-..|+.-++.
T Consensus 111 ~PkQE~~~~~~~~---~l~~~v~i~vG~~~d~~ 140 (172)
T PF03808_consen 111 APKQERWIARHRQ---RLPAGVIIGVGGAFDFL 140 (172)
T ss_pred CCHHHHHHHHHHH---HCCCCEEEEECchhhhh
Confidence 22332222222 22222555566666554
No 196
>PLN02207 UDP-glycosyltransferase
Probab=59.00 E-value=1.7e+02 Score=32.11 Aligned_cols=138 Identities=9% Similarity=0.043 Sum_probs=68.9
Q ss_pred cEEEEEccCc--cccCHHHHHHHHhhhcCCCeEEEEEecCChh-hHHHH-HHHHHHCCCCeeEeccCChHHHHHHHhcCC
Q 008028 372 PLIGFIGRLE--EQKGSDILAQAIPKFMGGNVQIVVLGTGKKP-MEQQI-EQLEIICPEKARGITKFSTPLAHKIIAGAD 447 (580)
Q Consensus 372 ~~i~f~Grl~--~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~-~~~~i-~~l~~~~~~~v~~~~~~~~~~~~~~~~~aD 447 (580)
.+.+..|... +.+-+..++.+++.+ +..|+.+=..... ..+.+ +.+..+.+++.....+.++.. +++...
T Consensus 277 VVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~---IL~H~~ 350 (468)
T PLN02207 277 VVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVE---ILAHKA 350 (468)
T ss_pred EEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHH---Hhcccc
Confidence 4556667653 244466667777665 3344443221100 00000 222222334444433333333 677766
Q ss_pred EEEecCCCCCcc-HHHHHHHHcCCceEEcCCCC----cceeEec-CceeEEEe-ecccccccCCcccHHHHHHHHHHHHH
Q 008028 448 FMLVPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LFDTVKE-GITGFQMR-SFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 448 i~l~ps~~E~~g-~~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~~~~-~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
+..+-+. || ++.+||+.+|+|+|+--..+ ....+.+ -+.|.-++ .+..+.. +.-+.+++.++|.+++.
T Consensus 351 vg~FvTH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~--~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 351 VGGFVSH---CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD--EIVNANEIETAIRCVMN 425 (468)
T ss_pred cceeeec---CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC--CcccHHHHHHHHHHHHh
Confidence 6444443 44 47999999999999876433 1111111 33454331 0000000 12367899999999996
No 197
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=57.87 E-value=1.2e+02 Score=32.94 Aligned_cols=137 Identities=12% Similarity=0.061 Sum_probs=72.8
Q ss_pred cEEEEEccCc--cccCHHHHHHHHhhhcCCCeEEEE-EecC-C------hhhH---HHHHHHHHHCCCCeeEeccCChHH
Q 008028 372 PLIGFIGRLE--EQKGSDILAQAIPKFMGGNVQIVV-LGTG-K------KPME---QQIEQLEIICPEKARGITKFSTPL 438 (580)
Q Consensus 372 ~~i~f~Grl~--~~Kg~~~ll~a~~~l~~~~v~lii-~G~g-~------~~~~---~~i~~l~~~~~~~v~~~~~~~~~~ 438 (580)
-+++..|.+. +.+-...++.+++.+. .+|+. +.+. . .... ...+.+..+.+++.....+.+ ..
T Consensus 263 VvyvsfGS~~~l~~~q~~ela~gL~~s~---~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~P-Q~ 338 (455)
T PLN02152 263 VIYVSFGTMVELSKKQIEELARALIEGK---RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCS-QI 338 (455)
T ss_pred eEEEEecccccCCHHHHHHHHHHHHHcC---CCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCC-HH
Confidence 4556667653 4556777777777763 24443 3321 0 0000 112333333444444433333 32
Q ss_pred HHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeEecC-ceeEEEeecccccccCCcccHHHHHH
Q 008028 439 AHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTVKEG-ITGFQMRSFHVECDRVDLADVAAIAK 513 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~~~~~~~~~~~~v~~~d~~~la~ 513 (580)
. +++..++-++-+. +-.++.+||+.+|+|+|+-...+ ....+.+. +.|+-+..-.. +.-+.+++++
T Consensus 339 ~--iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~-----~~~~~e~l~~ 409 (455)
T PLN02152 339 E--VLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSE-----GLVERGEIRR 409 (455)
T ss_pred H--HhCCcccceEEee--CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcC-----CcCcHHHHHH
Confidence 2 7888887555554 23457999999999998876432 11112121 23444310000 1236789999
Q ss_pred HHHHHHHh
Q 008028 514 HVNRAVAT 521 (580)
Q Consensus 514 ~l~~ll~~ 521 (580)
++.+++++
T Consensus 410 av~~vm~~ 417 (455)
T PLN02152 410 CLEAVMEE 417 (455)
T ss_pred HHHHHHhh
Confidence 99999974
No 198
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=54.13 E-value=63 Score=29.97 Aligned_cols=101 Identities=23% Similarity=0.329 Sum_probs=63.9
Q ss_pred ccccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCC-CeeE--eccCChHHH----HHH-HhcCCEEEec
Q 008028 381 EEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPE-KARG--ITKFSTPLA----HKI-IAGADFMLVP 452 (580)
Q Consensus 381 ~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~-~v~~--~~~~~~~~~----~~~-~~~aDi~l~p 452 (580)
...-|.|++-+.++...+.+.++.++|..++.+.+..+.+..++|+ ++.+ .+.|..... ..+ -.++|++++-
T Consensus 27 ~r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vg 106 (171)
T cd06533 27 ERVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVG 106 (171)
T ss_pred cccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEE
Confidence 3456889999999888777899999999888788888888889886 4444 223332221 222 3478888764
Q ss_pred C---CCCCccHHHHHHHHcCCceEEcCCCCcceeE
Q 008028 453 S---RFEPCGLIQLHAMRYGTVPIVASTGGLFDTV 484 (580)
Q Consensus 453 s---~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i 484 (580)
- +.|-+.....+.+ ..+++.+ .||.-|+.
T Consensus 107 lG~PkQE~~~~~~~~~l--~~~v~~~-vG~~~d~~ 138 (171)
T cd06533 107 LGAPKQELWIARHKDRL--PVPVAIG-VGGSFDFL 138 (171)
T ss_pred CCCCHHHHHHHHHHHHC--CCCEEEE-eceeeEec
Confidence 3 3565555544444 2333333 55555543
No 199
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=53.52 E-value=13 Score=41.04 Aligned_cols=39 Identities=26% Similarity=0.255 Sum_probs=30.9
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
-||+.+++.. .+..-.....++++|+++||+|+++++..
T Consensus 21 ~kIl~~~P~~-----~~SH~~~~~~l~~~La~rGH~VTvi~p~~ 59 (507)
T PHA03392 21 ARILAVFPTP-----AYSHHSVFKVYVEALAERGHNVTVIKPTL 59 (507)
T ss_pred ccEEEEcCCC-----CCcHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 4677776431 45677888999999999999999998853
No 200
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=53.45 E-value=12 Score=36.86 Aligned_cols=37 Identities=27% Similarity=0.463 Sum_probs=28.6
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
||++.|..- .||+|. ++.+|+-+|+.+|.+|.+|=..
T Consensus 1 M~~iai~s~------kGGvG~TTltAnLA~aL~~~G~~VlaID~d 39 (243)
T PF06564_consen 1 MKVIAIVSP------KGGVGKTTLTANLAWALARLGESVLAIDLD 39 (243)
T ss_pred CcEEEEecC------CCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 665555532 577775 7888999999999999999654
No 201
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=52.77 E-value=10 Score=38.21 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=38.7
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
|+|++++...+|+. .||++.-+.+|.+.|.+.-..|..|++..
T Consensus 1 ~~V~ll~EGtYPyv-~GGVSsW~~~LI~glpe~~F~v~~i~a~~ 43 (268)
T PF11997_consen 1 MDVCLLTEGTYPYV-RGGVSSWVHQLIRGLPEHEFHVYAIGANP 43 (268)
T ss_pred CeEEEEecCcCCCC-CCchhHHHHHHHhcCCCceEEEEEEeCCc
Confidence 79999999999987 99999999999999998877888888764
No 202
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=51.66 E-value=3.4e+02 Score=29.26 Aligned_cols=163 Identities=12% Similarity=0.174 Sum_probs=96.0
Q ss_pred EEccCccccCHHHHHHHHhhhcCCCeEEEEEecCC-----hhhHHHHHHHHHH-CCCCeeEeccCC-----hHHHHHHHh
Q 008028 376 FIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGK-----KPMEQQIEQLEII-CPEKARGITKFS-----TPLAHKIIA 444 (580)
Q Consensus 376 f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~-----~~~~~~i~~l~~~-~~~~v~~~~~~~-----~~~~~~~~~ 444 (580)
|.+.-...+=+++.-++++.++.....++|+-+.+ +++.++++++... .|+.+.++.+-- .+++..+-.
T Consensus 158 ~f~~~~~~~Pv~Iak~al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e 237 (451)
T COG0541 158 FFGSGTEKDPVEIAKAALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNE 237 (451)
T ss_pred eecCCCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhh
Confidence 34442233445677888888887777888887743 5677788888774 466677765532 233334444
Q ss_pred cCCE-EEecCCC--CCccHH-HHHHHHcCCceEEcCCCCcceeEecC----ceeEEEeecccccccCCcccHHHHHHHHH
Q 008028 445 GADF-MLVPSRF--EPCGLI-QLHAMRYGTVPIVASTGGLFDTVKEG----ITGFQMRSFHVECDRVDLADVAAIAKHVN 516 (580)
Q Consensus 445 ~aDi-~l~ps~~--E~~g~~-~lEAma~G~PvI~s~~gg~~e~i~~~----~~G~~~~~~~~~~~~v~~~d~~~la~~l~ 516 (580)
..++ .++-+.. .+-|-. +==....|+|+-.-.+|--.+-++.- -.+-+. --+|+..|.+.+.
T Consensus 238 ~l~itGvIlTKlDGdaRGGaALS~~~~tg~PIkFiGtGEki~dLE~F~P~R~asRIL----------GMGDv~sLvEk~~ 307 (451)
T COG0541 238 ALGITGVILTKLDGDARGGAALSARAITGKPIKFIGTGEKIDDLEPFHPDRFASRIL----------GMGDVLSLIEKAE 307 (451)
T ss_pred hcCCceEEEEcccCCCcchHHHhhHHHHCCCeEEEecCCCcccCCCcChHHHHHHhc----------CcccHHHHHHHHH
Confidence 4444 2233333 333333 33345679998887776544333221 111111 3467777777777
Q ss_pred HHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHH
Q 008028 517 RAVATYGTPALKEMIQNCMALDLSWKEPARLWEKM 551 (580)
Q Consensus 517 ~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~ 551 (580)
+.++ .++..++.++-..-.|+.+.+.+++..+
T Consensus 308 ~~~d---~e~a~~~~~kl~~g~FtL~Df~~Ql~~m 339 (451)
T COG0541 308 EVVD---EEEAEKLAEKLKKGKFTLEDFLEQLEQM 339 (451)
T ss_pred Hhhh---HHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 7666 3455566666666789999888887765
No 203
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=51.29 E-value=28 Score=29.33 Aligned_cols=33 Identities=9% Similarity=0.197 Sum_probs=26.5
Q ss_pred CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEe
Q 008028 399 GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGI 431 (580)
Q Consensus 399 ~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~ 431 (580)
++.++|++|+.++.--+...++++++|++|..+
T Consensus 63 P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 63 PERKFILIGDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 678999999977656777888899999876543
No 204
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=50.66 E-value=1.1e+02 Score=29.34 Aligned_cols=97 Identities=15% Similarity=0.131 Sum_probs=58.8
Q ss_pred ccCHHHHHHHHhhhcCCCeEEEEEecCCh---hhHHHHHHHHHHC-CCCeeEeccCChHHHHHHHhcCCEEEecCC----
Q 008028 383 QKGSDILAQAIPKFMGGNVQIVVLGTGKK---PMEQQIEQLEIIC-PEKARGITKFSTPLAHKIIAGADFMLVPSR---- 454 (580)
Q Consensus 383 ~Kg~~~ll~a~~~l~~~~v~lii~G~g~~---~~~~~i~~l~~~~-~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~---- 454 (580)
..+.+.|.+.+.++.+.+.+++++.+... ++.+.+.+.-.++ +..+..+..++.+.....+..||++++|-=
T Consensus 14 ~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~GG~~~~ 93 (212)
T cd03146 14 AHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGGGNTFN 93 (212)
T ss_pred ccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECCchHHH
Confidence 34566777777766566789999998653 3344444443444 434444433334444568899999999851
Q ss_pred ----CCCccH--HHHHHHHcCCceEEcCCCC
Q 008028 455 ----FEPCGL--IQLHAMRYGTVPIVASTGG 479 (580)
Q Consensus 455 ----~E~~g~--~~lEAma~G~PvI~s~~gg 479 (580)
+...|+ .+-++...|+|++.+..|.
T Consensus 94 ~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 94 LLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred HHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 222333 2445566799888777653
No 205
>PRK10037 cell division protein; Provisional
Probab=49.42 E-value=16 Score=36.16 Aligned_cols=37 Identities=22% Similarity=0.377 Sum_probs=28.9
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||+-|... .||.|. .+.+|+.+|+++|++|.+|=..
T Consensus 1 ~~~iav~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~D 39 (250)
T PRK10037 1 MAILGLQGV------RGGVGTTSITAALAWSLQMLGENVLVIDAC 39 (250)
T ss_pred CcEEEEecC------CCCccHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 666555554 699887 4578999999999999999554
No 206
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=48.40 E-value=2.5e+02 Score=29.75 Aligned_cols=123 Identities=12% Similarity=0.176 Sum_probs=66.9
Q ss_pred HHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCC--CCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHH
Q 008028 386 SDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICP--EKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQL 463 (580)
Q Consensus 386 ~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~--~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~l 463 (580)
+..+++.++......+.+...-.+..+.....+.+..... .++.....-...+.-.++++||+.|-. |+- +.+
T Consensus 224 v~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~-R~H----saI 298 (385)
T COG2327 224 VNEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGM-RLH----SAI 298 (385)
T ss_pred HHHHHHHHHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEee-hhH----HHH
Confidence 3445555544444444444433333334444445544444 234333221123444589999987733 322 355
Q ss_pred HHHHcCCceEEcCCCCccee-Eec-CceeEEEeecccccccCCcccHHHHHHHHHHHHHh
Q 008028 464 HAMRYGTVPIVASTGGLFDT-VKE-GITGFQMRSFHVECDRVDLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 464 EAma~G~PvI~s~~gg~~e~-i~~-~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 521 (580)
=||+.|+|+|+-....=.+- +.+ +..+|.. ..++.+.+.+.+...+.+.+
T Consensus 299 ~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~--------~i~~~~~~~l~~~~~e~~~~ 350 (385)
T COG2327 299 MALAFGVPAIAIAYDPKVRGLMQDLGLPGFAI--------DIDPLDAEILSAVVLERLTK 350 (385)
T ss_pred HHHhcCCCeEEEeecHHHHHHHHHcCCCcccc--------cCCCCchHHHHHHHHHHHhc
Confidence 59999999999875432221 111 2233432 23788889999988888875
No 207
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=48.38 E-value=59 Score=32.36 Aligned_cols=41 Identities=20% Similarity=0.146 Sum_probs=29.9
Q ss_pred HHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCCc
Q 008028 440 HKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL 480 (580)
Q Consensus 440 ~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~ 480 (580)
..++..+|+++.-+..+..--....|+..|+|+++..+|.-
T Consensus 55 ~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s 95 (257)
T PRK00048 55 EAVLADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFT 95 (257)
T ss_pred HHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 34567899999666555555567889999999998765543
No 208
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=48.24 E-value=77 Score=31.37 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=60.7
Q ss_pred CHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeE--eccCChHHHH----H-HHhcCCEEEec---CC
Q 008028 385 GSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARG--ITKFSTPLAH----K-IIAGADFMLVP---SR 454 (580)
Q Consensus 385 g~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~--~~~~~~~~~~----~-~~~~aDi~l~p---s~ 454 (580)
|.|++.+.++...+.+.++.++|..+...++..+.+..+++.++.+ .+.|+.+... . --+++|++++- ++
T Consensus 90 G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~Pk 169 (243)
T PRK03692 90 GADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPK 169 (243)
T ss_pred hHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 8899988888776667899999998877888888888888545543 2445433322 2 23588988764 34
Q ss_pred CCCccHHHHHHHHcCCceEEcCCCCcceeE
Q 008028 455 FEPCGLIQLHAMRYGTVPIVASTGGLFDTV 484 (580)
Q Consensus 455 ~E~~g~~~lEAma~G~PvI~s~~gg~~e~i 484 (580)
.|-|-....+-+ +.+++ -..||.-|+.
T Consensus 170 QE~~~~~~~~~~--~~~v~-~gvGg~fD~~ 196 (243)
T PRK03692 170 QEIFMRDCRLVY--PDALY-MGVGGTYDVF 196 (243)
T ss_pred HHHHHHHHHHhC--CCCEE-EEeCeEEEEe
Confidence 455433322222 34443 3466666654
No 209
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=47.19 E-value=1.4e+02 Score=32.91 Aligned_cols=72 Identities=11% Similarity=-0.089 Sum_probs=45.0
Q ss_pred HHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeE-ecCceeEEEeecccccccCCcccHHHHHHHHH
Q 008028 442 IIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTV-KEGITGFQMRSFHVECDRVDLADVAAIAKHVN 516 (580)
Q Consensus 442 ~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~ 516 (580)
+++...+..+-+. +--++.+||+.+|+|+|+--..+ ....+ ..-+.|..+. ..+ ..-+.++++++|.
T Consensus 351 iL~h~~vg~FitH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~-~~~-----~~~~~~~l~~av~ 422 (481)
T PLN02992 351 ILAHQAVGGFLTH--CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSD-DPK-----EVISRSKIEALVR 422 (481)
T ss_pred HhCCcccCeeEec--CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEec-CCC-----CcccHHHHHHHHH
Confidence 7888777444443 23357999999999999877443 22223 2334555541 000 1247789999999
Q ss_pred HHHHh
Q 008028 517 RAVAT 521 (580)
Q Consensus 517 ~ll~~ 521 (580)
+++.+
T Consensus 423 ~vm~~ 427 (481)
T PLN02992 423 KVMVE 427 (481)
T ss_pred HHhcC
Confidence 99964
No 210
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=46.68 E-value=3.8e+02 Score=28.92 Aligned_cols=152 Identities=13% Similarity=0.126 Sum_probs=86.7
Q ss_pred HHHHHHHhhhcCCCeEEEEEecCC-----hhhHHHHHHHHHHC-CCCeeEeccCC-----hHHHHHHHh--cCCEEEecC
Q 008028 387 DILAQAIPKFMGGNVQIVVLGTGK-----KPMEQQIEQLEIIC-PEKARGITKFS-----TPLAHKIIA--GADFMLVPS 453 (580)
Q Consensus 387 ~~ll~a~~~l~~~~v~lii~G~g~-----~~~~~~i~~l~~~~-~~~v~~~~~~~-----~~~~~~~~~--~aDi~l~ps 453 (580)
.+..++++++++....++|+=+.+ ..+.+++.++.... ++.+.++..-. ...+..+-. +.+-++++=
T Consensus 169 ~i~~~~l~~~~~~~~DvViIDTaGr~~~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlTK 248 (429)
T TIGR01425 169 KIASEGVEKFKKENFDIIIVDTSGRHKQEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIITK 248 (429)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCcchHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEEC
Confidence 445566766655567777776643 23445555554332 34444444321 123333322 355667666
Q ss_pred CCCC--ccHHHHHHHHcCCceEEcCCCCcceeEecCc----eeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHH
Q 008028 454 RFEP--CGLIQLHAMRYGTVPIVASTGGLFDTVKEGI----TGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPAL 527 (580)
Q Consensus 454 ~~E~--~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~----~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 527 (580)
..|. .|..+-=+...|+|+..-.+|--.+-+.... ..-++ .-+|+..|.+.+.+.++. ++.
T Consensus 249 lD~~argG~aLs~~~~t~~PI~fig~Ge~v~Dle~f~p~~~~~ril----------gmgDi~~L~ek~~~~~~~---~~~ 315 (429)
T TIGR01425 249 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEIFKTQPFISKLL----------GMGDIEGLIDKVQDLKLD---DNE 315 (429)
T ss_pred ccCCCCccHHhhhHHHHCCCeEEEcCCCChhhcCcCChHHHHHHHh----------cCCCcHHHHHHHHHhhhH---HHH
Confidence 5543 5666666788899988888775444333211 11111 457777888888776663 334
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHH
Q 008028 528 KEMIQNCMALDLSWKEPARLWEKM 551 (580)
Q Consensus 528 ~~~~~~~~~~~fs~~~~a~~~~~~ 551 (580)
.++.++.+...|+.+.+.+++..+
T Consensus 316 ~~~~~k~~~~~f~l~D~~~q~~~i 339 (429)
T TIGR01425 316 KALIEKLKEGTFTLRDMYEQFQNL 339 (429)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Confidence 455555555689998887777665
No 211
>PLN00414 glycosyltransferase family protein
Probab=45.19 E-value=1.1e+02 Score=33.17 Aligned_cols=73 Identities=4% Similarity=-0.067 Sum_probs=44.7
Q ss_pred HHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC----cceeE-ecCceeEEEeecccccccCCcccHHHHHHHHH
Q 008028 442 IIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG----LFDTV-KEGITGFQMRSFHVECDRVDLADVAAIAKHVN 516 (580)
Q Consensus 442 ~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~ 516 (580)
+++.+.+..+-++ +--++.+||+.+|+|+|+-...+ ....+ .+-+.|..+.. .++ ..-+.+++++++.
T Consensus 325 vL~h~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~-~~~----~~~~~~~i~~~v~ 397 (446)
T PLN00414 325 ILSHPSVGCFVNH--CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQR-EDS----GWFSKESLRDTVK 397 (446)
T ss_pred HhcCCccceEEec--CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecc-ccC----CccCHHHHHHHHH
Confidence 7877755333332 23367999999999999877432 22223 23355655410 000 0247889999999
Q ss_pred HHHHh
Q 008028 517 RAVAT 521 (580)
Q Consensus 517 ~ll~~ 521 (580)
+++++
T Consensus 398 ~~m~~ 402 (446)
T PLN00414 398 SVMDK 402 (446)
T ss_pred HHhcC
Confidence 99975
No 212
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=44.71 E-value=22 Score=33.73 Aligned_cols=37 Identities=14% Similarity=0.310 Sum_probs=28.8
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
||++.|+.. .||.|. .+..|+.+|+..|++|.+|=..
T Consensus 17 ~kvI~v~s~------kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 17 IKVLLITSV------KPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CcEEEEecC------CCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 677777653 455554 7899999999999999998654
No 213
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=44.25 E-value=32 Score=30.85 Aligned_cols=40 Identities=10% Similarity=0.194 Sum_probs=31.5
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||++|+...-+ .|-...++..+.+.+.+.|+++.++-+.
T Consensus 1 Mkilii~gS~r~---~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPRK---NSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSST---TSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCCC---CCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 899999986322 4667778888888899999999999875
No 214
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=42.69 E-value=76 Score=32.87 Aligned_cols=82 Identities=26% Similarity=0.419 Sum_probs=55.6
Q ss_pred CeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChH------------HHHHHHhcCCEEEe--cCCCCCccHH---H
Q 008028 400 NVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTP------------LAHKIIAGADFMLV--PSRFEPCGLI---Q 462 (580)
Q Consensus 400 ~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~------------~~~~~~~~aDi~l~--ps~~E~~g~~---~ 462 (580)
.-.+-|+|-|. +-+++.+....++-++..+..|... .+..+++.||++++ |..-|+.|+. .
T Consensus 142 gkTvGIiG~G~--IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~ 219 (324)
T COG0111 142 GKTVGIIGLGR--IGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLINAEE 219 (324)
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcccCHHH
Confidence 44677888876 6667777777777677777665332 25579999999875 4456776665 6
Q ss_pred HHHHHcCCceEEcCCCCccee
Q 008028 463 LHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 463 lEAma~G~PvI~s~~gg~~e~ 483 (580)
+..|--|..+|-+..|++.|.
T Consensus 220 ~a~MK~gailIN~aRG~vVde 240 (324)
T COG0111 220 LAKMKPGAILINAARGGVVDE 240 (324)
T ss_pred HhhCCCCeEEEECCCcceecH
Confidence 666666776666667766553
No 215
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=42.50 E-value=44 Score=35.48 Aligned_cols=39 Identities=28% Similarity=0.421 Sum_probs=30.6
Q ss_pred CCceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
..|+|+.|+.. .||.|. .+..|+.+|+..|++|.+|=..
T Consensus 102 ~~~~vI~v~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~D 142 (387)
T TIGR03453 102 EHLQVIAVTNF------KGGSGKTTTAAHLAQYLALRGYRVLAIDLD 142 (387)
T ss_pred CCceEEEEEcc------CCCcCHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 45777777654 688886 5677999999999999999665
No 216
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=41.16 E-value=62 Score=25.74 Aligned_cols=45 Identities=13% Similarity=0.163 Sum_probs=38.3
Q ss_pred HHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecCCCCCCCcCCCCc
Q 008028 281 AGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTD 336 (580)
Q Consensus 281 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~NGvd~~~~~~~~~ 336 (580)
......|.|++.-+...+.+++ .|+. +|..+|-++|...+.|...
T Consensus 14 ~i~~~~~~iFt~D~~~~~~~~~---~G~~--------~V~yLPLAa~~~~~~p~~~ 58 (79)
T PF12996_consen 14 SIANSYDYIFTFDRSFVEEYRN---LGAE--------NVFYLPLAANPERFRPIPV 58 (79)
T ss_pred hhCCCCCEEEEECHHHHHHHHH---cCCC--------CEEEccccCCHHHhCcccC
Confidence 4566899999999999999997 6765 8999999999999988743
No 217
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=40.78 E-value=25 Score=36.06 Aligned_cols=37 Identities=38% Similarity=0.633 Sum_probs=28.6
Q ss_pred ceEEEEeecccCccccccHHHHhc--cchHHHHhCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLG--GLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~--~l~~aL~~~G~~V~vi~~~y 128 (580)
|||+||+. .||+|.-+- .++-++++.|++|.+++...
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dp 39 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTDP 39 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESST
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecCC
Confidence 78999997 488887554 47788899999999998764
No 218
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=40.40 E-value=71 Score=32.84 Aligned_cols=45 Identities=13% Similarity=0.318 Sum_probs=33.2
Q ss_pred HHHHHhcCCEEEec--CCCCC---ccHHHHHHHHcCCceEEcCCCCccee
Q 008028 439 AHKIIAGADFMLVP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 439 ~~~~~~~aDi~l~p--s~~E~---~g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
+..+++.||++++. ..-|+ ++-..++.|--|.-+|-+..|++.|.
T Consensus 190 l~ell~~sDvv~lh~Plt~~T~~li~~~~~~~Mk~~a~lIN~aRG~vVDe 239 (311)
T PRK08410 190 LEELLKTSDIISIHAPLNEKTKNLIAYKELKLLKDGAILINVGRGGIVNE 239 (311)
T ss_pred HHHHhhcCCEEEEeCCCCchhhcccCHHHHHhCCCCeEEEECCCccccCH
Confidence 55789999998763 33455 55568888888888888888887664
No 219
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=40.38 E-value=4.1e+02 Score=26.95 Aligned_cols=136 Identities=13% Similarity=0.126 Sum_probs=71.4
Q ss_pred EEEccCccccCHHHHHHHHhhhcC-CCeEEEEEecCCh-hhHHHHHH--------------HHHHCCCCeeEeccCChHH
Q 008028 375 GFIGRLEEQKGSDILAQAIPKFMG-GNVQIVVLGTGKK-PMEQQIEQ--------------LEIICPEKARGITKFSTPL 438 (580)
Q Consensus 375 ~f~Grl~~~Kg~~~ll~a~~~l~~-~~v~lii~G~g~~-~~~~~i~~--------------l~~~~~~~v~~~~~~~~~~ 438 (580)
.|+||...+||+..+++.-++..+ .+..-++-|-... ....-.++ ....-..-+..++.|-.++
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E 266 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSE 266 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHH
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHH
Confidence 899999999999999999887765 6778888775331 11111111 1000001244555565555
Q ss_pred HHHHHhcCCEEEecCC------CCCccHHHHHHHHcCCceEEcCC-C--------CcceeEecCceeEEEeecccccccC
Q 008028 439 AHKIIAGADFMLVPSR------FEPCGLIQLHAMRYGTVPIVAST-G--------GLFDTVKEGITGFQMRSFHVECDRV 503 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps~------~E~~g~~~lEAma~G~PvI~s~~-g--------g~~e~i~~~~~G~~~~~~~~~~~~v 503 (580)
.-..++.+-+...-|. .+..-.+.+|..|||+.+|.-.. | |-+-+- -..|... +
T Consensus 267 ~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~--~~~~~I~---------~ 335 (355)
T PF11440_consen 267 GLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYID--HPYSAIY---------F 335 (355)
T ss_dssp HHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGS--S--S-EE---------E
T ss_pred HHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeec--cCcceeE---------e
Confidence 5567888777766554 24466789999999998777542 2 222111 1223332 3
Q ss_pred CcccHHHHHHHHHHHHHh
Q 008028 504 DLADVAAIAKHVNRAVAT 521 (580)
Q Consensus 504 ~~~d~~~la~~l~~ll~~ 521 (580)
|..|.++-.+.|.++..+
T Consensus 336 De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 336 DENDLESTVEKLIEVANN 353 (355)
T ss_dssp -TTSHHHHHHHHHHHHT-
T ss_pred ccchHHHHHHHHHHHhcc
Confidence 888888888888777553
No 220
>PLN02534 UDP-glycosyltransferase
Probab=40.16 E-value=5.5e+02 Score=28.31 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=30.4
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
.++|++|. +| .-|.-.-+.+|++.|+.+|+.|+++++..
T Consensus 8 ~~Hvv~vP---fp---aqGHi~P~l~LAk~La~~G~~vT~v~t~~ 46 (491)
T PLN02534 8 QLHFVLIP---LM---AQGHMIPMIDMARLLAERGVIVSLVTTPQ 46 (491)
T ss_pred CCEEEEEC---CC---CcchHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35777776 34 34666777899999999999999999864
No 221
>PLN00016 RNA-binding protein; Provisional
Probab=39.89 E-value=21 Score=37.63 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=30.3
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.|||++++.. .||.|.+-..|++.|.+.||+|++++-.
T Consensus 52 ~~~VLVt~~~------~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 52 KKKVLIVNTN------SGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cceEEEEecc------CCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 3678877654 5777777778999999999999999864
No 222
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=39.58 E-value=26 Score=35.65 Aligned_cols=35 Identities=34% Similarity=0.613 Sum_probs=28.6
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||++.. .||+|. .+.+|+.+|+++|++|.+|=..
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7877666 488876 5678999999999999999765
No 223
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=38.75 E-value=3.8e+02 Score=26.90 Aligned_cols=103 Identities=11% Similarity=0.036 Sum_probs=64.3
Q ss_pred cEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEec-----------C-ChhhHHHHHHHHHHCCCCeeEeccCChHHH
Q 008028 372 PLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGT-----------G-KKPMEQQIEQLEIICPEKARGITKFSTPLA 439 (580)
Q Consensus 372 ~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~-----------g-~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~ 439 (580)
+.++.+|-- .-...+.+++..++|++-.++++..|. | ..+-.+.++++..+.+-. .....++...+
T Consensus 27 ~~~~iaGPC-sie~~~~~~~~A~~lk~~g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~-~~te~~d~~~~ 104 (266)
T PRK13398 27 EKIIIAGPC-AVESEEQMVKVAEKLKELGVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLP-VVTEVMDTRDV 104 (266)
T ss_pred CEEEEEeCC-cCCCHHHHHHHHHHHHHcCCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCC-EEEeeCChhhH
Confidence 345555543 234567777777777776778888882 2 123345566666666532 23344566666
Q ss_pred HHHHhcCCEEEecCCC-CCccHHHHHHHHcCCceEEcCC
Q 008028 440 HKIIAGADFMLVPSRF-EPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 440 ~~~~~~aDi~l~ps~~-E~~g~~~lEAma~G~PvI~s~~ 477 (580)
..+..-+|++-++|+. +.+. -+-++...|+||+.++-
T Consensus 105 ~~l~~~vd~~kIga~~~~n~~-LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 105 EEVADYADMLQIGSRNMQNFE-LLKEVGKTKKPILLKRG 142 (266)
T ss_pred HHHHHhCCEEEECcccccCHH-HHHHHhcCCCcEEEeCC
Confidence 6666679999999973 4433 24445567999999884
No 224
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=38.62 E-value=33 Score=33.64 Aligned_cols=38 Identities=37% Similarity=0.449 Sum_probs=29.6
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
|||+-|... .||.|. .+..|+-+|+++|.+|.+|=...
T Consensus 1 M~iI~v~n~------KGGvGKTT~a~nLA~~la~~G~~VlliD~Dp 40 (231)
T PRK13849 1 MKLLTFCSF------KGGAGKTTALMGLCAALASDGKRVALFEADE 40 (231)
T ss_pred CeEEEEECC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 666666554 799987 45678999999999999997753
No 225
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=38.35 E-value=25 Score=36.34 Aligned_cols=77 Identities=22% Similarity=0.404 Sum_probs=50.3
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEecCCccccccCCcEEEEEEeCCeEEEEEEEEEEecCe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGV 162 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (580)
|+|+||+. .||+|. .+..++-.|++.|..|.+|+....+. -..++....+.....+. +++
T Consensus 2 ~riv~f~G-------KGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhs-----L~d~f~~elg~~~~~I~------~nL 63 (322)
T COG0003 2 TRIVFFTG-------KGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHS-----LGDVFDLELGHDPRKVG------PNL 63 (322)
T ss_pred cEEEEEec-------CCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCc-----hHhhhccccCCchhhcC------CCC
Confidence 68999987 599999 77778899999998888887653211 11123333333222222 577
Q ss_pred eEEEecCccchhhhccC
Q 008028 163 DRVFVDHPVFLEKVWGK 179 (580)
Q Consensus 163 ~~~~l~~~~~~~~~~~~ 179 (580)
+..-+|....+.+.|++
T Consensus 64 ~a~eiD~~~~l~ey~~~ 80 (322)
T COG0003 64 DALELDPEKALEEYWDE 80 (322)
T ss_pred ceeeecHHHHHHHHHHH
Confidence 77788877777666644
No 226
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=37.82 E-value=2.4e+02 Score=28.86 Aligned_cols=28 Identities=32% Similarity=0.445 Sum_probs=24.4
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 101 GGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 101 GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
-|=..++..|.+.|.++||+|-|++...
T Consensus 62 aGKSTli~~L~~~l~~~G~rVaVlAVDP 89 (323)
T COG1703 62 AGKSTLIEALGRELRERGHRVAVLAVDP 89 (323)
T ss_pred CchHHHHHHHHHHHHHCCcEEEEEEECC
Confidence 4666789999999999999999999753
No 227
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=37.80 E-value=33 Score=33.15 Aligned_cols=26 Identities=35% Similarity=0.524 Sum_probs=20.1
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 101 GGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 101 GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
||.|.+-..++..|.+.||+|.++..
T Consensus 7 GG~G~mG~ala~~L~~~G~~V~v~~r 32 (219)
T TIGR01915 7 GGTGDQGKGLALRLAKAGNKIIIGSR 32 (219)
T ss_pred cCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 44556666889999999999988754
No 228
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=36.80 E-value=41 Score=34.50 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=27.0
Q ss_pred CCCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 82 QQGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 82 ~~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
+..|||+++. .|++|.. ++..|++.||+|++++..
T Consensus 3 ~~~m~I~IiG--------~GaiG~~---lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIG--------TGAIGGF---YGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CcCcEEEEEC--------CCHHHHH---HHHHHHHCCCeEEEEEeC
Confidence 4569999997 3777764 556688899999999764
No 229
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=36.80 E-value=92 Score=34.52 Aligned_cols=156 Identities=13% Similarity=0.138 Sum_probs=90.9
Q ss_pred EEEEEccCc-cccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEe
Q 008028 373 LIGFIGRLE-EQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLV 451 (580)
Q Consensus 373 ~i~f~Grl~-~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ 451 (580)
.-+..|.-. -+||-+..++.+.+.. .+.-.|.+... ... ..+.-|.-++.........+++.+-++|=
T Consensus 279 ~AlVyGK~~~~w~~k~~~l~~l~~~~--eih~tV~~~~~--~~~-------~~P~~V~NHG~l~~~ef~~lL~~akvfiG 347 (559)
T PF15024_consen 279 QALVYGKERYMWKGKEKYLDVLHKYM--EIHGTVYDEPQ--RPP-------NVPSFVKNHGILSGDEFQQLLRKAKVFIG 347 (559)
T ss_pred eeEEEccchhhhcCcHHHHHHHHhhc--EEEEEeccCCC--CCc-------ccchhhhhcCcCCHHHHHHHHHhhhEeee
Confidence 444445433 3667777777776642 34444433321 001 11222334455677888889999999984
Q ss_pred cCC-CCCccHHHHHHHHcCCceEEcCCCCcce-----eEecC-----------ceeEEEe---ecccccccCCcccHHHH
Q 008028 452 PSR-FEPCGLIQLHAMRYGTVPIVASTGGLFD-----TVKEG-----------ITGFQMR---SFHVECDRVDLADVAAI 511 (580)
Q Consensus 452 ps~-~E~~g~~~lEAma~G~PvI~s~~gg~~e-----~i~~~-----------~~G~~~~---~~~~~~~~v~~~d~~~l 511 (580)
... +| |=+-+||+++|+|.|-........ +..+- ..--.+| -|+| |-.|.+++
T Consensus 348 lGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytV-----d~~n~~~v 420 (559)
T PF15024_consen 348 LGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTV-----DINNSTEV 420 (559)
T ss_pred cCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEE-----cCCCHHHH
Confidence 432 44 456899999999987766432211 11110 0000133 3343 89999999
Q ss_pred HHHHHHHHHhcChhHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 008028 512 AKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKMLLS 554 (580)
Q Consensus 512 a~~l~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~ 554 (580)
-++|.++++.. .+ -.+--+||-+.|.++...+++.
T Consensus 421 ~~Avk~il~~~-v~-------Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 421 EAAVKAILATP-VE-------PYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred HHHHHHHHhcC-CC-------CcCCcccCHHHHHHHHHHHHHh
Confidence 99999999962 11 1122468888888887666553
No 230
>PRK13671 hypothetical protein; Provisional
Probab=36.42 E-value=2e+02 Score=29.39 Aligned_cols=136 Identities=11% Similarity=0.130 Sum_probs=71.2
Q ss_pred EEEEEccCcc-ccCHHHHHHHHhhhcC-CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEE
Q 008028 373 LIGFIGRLEE-QKGSDILAQAIPKFMG-GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFML 450 (580)
Q Consensus 373 ~i~f~Grl~~-~Kg~~~ll~a~~~l~~-~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l 450 (580)
++|.+..+.| +.|.-.+++.+.+... ..+-++..|.... ++.......+ .......-.|+|+++
T Consensus 2 ~~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~~q-------------rg~pa~~~~~-~R~~ma~~~G~DLVi 67 (298)
T PRK13671 2 AIGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYTQ-------------RGEIAVASFE-KRKKIALKYGVDKVI 67 (298)
T ss_pred ceeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCCCC-------------CCCCCCCCHH-HHHHHHHHcCCCEEE
Confidence 3577777776 7788788887777544 3344444454320 0000000111 111112456899988
Q ss_pred ecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcChhHHHHH
Q 008028 451 VPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEM 530 (580)
Q Consensus 451 ~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~ 530 (580)
=-+. .+.+.-.|..|.|..-+....| .|.+ +|| .+.+|.+.+.+...-+.+. ++...+.
T Consensus 68 ELP~--~~a~~sAe~FA~gaV~lL~~lg--vd~l-------~FG--------sE~~d~~~l~~~a~~l~~~--~~~~~~~ 126 (298)
T PRK13671 68 KLPF--EYATQAAHIFAKGAIKKLNKEK--IDKL-------IFG--------SESNDIELMYKIANTIKEN--EEEYNQL 126 (298)
T ss_pred eccH--HHHhhchHHHHHHHHHHHHHcC--CCEE-------EEC--------CCCCCHHHHHHHHHHHHhC--cHHHHHH
Confidence 3332 3555566777777766666666 2322 222 1445666665555444443 4555666
Q ss_pred HHHHHHhcCCchH
Q 008028 531 IQNCMALDLSWKE 543 (580)
Q Consensus 531 ~~~~~~~~fs~~~ 543 (580)
.++.+.+..|+..
T Consensus 127 l~~~l~~G~Sy~~ 139 (298)
T PRK13671 127 LKKNLKQGYSFPK 139 (298)
T ss_pred HHHHHHCCCCHHH
Confidence 6655555555543
No 231
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=35.90 E-value=1.4e+02 Score=27.66 Aligned_cols=82 Identities=18% Similarity=0.257 Sum_probs=47.1
Q ss_pred CeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChH------------HHHHHHhcCCEEEecCC--CCC---ccHHH
Q 008028 400 NVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTP------------LAHKIIAGADFMLVPSR--FEP---CGLIQ 462 (580)
Q Consensus 400 ~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~------------~~~~~~~~aDi~l~ps~--~E~---~g~~~ 462 (580)
+-.+-|+|-|. +-+.+.++...++-+|.++..+..+ ....+++.||++++.-. -|+ ++-..
T Consensus 36 g~tvgIiG~G~--IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~~~~ 113 (178)
T PF02826_consen 36 GKTVGIIGYGR--IGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLINAEF 113 (178)
T ss_dssp TSEEEEESTSH--HHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBSHHH
T ss_pred CCEEEEEEEcC--CcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeeeeee
Confidence 44555556554 3444444444444445554444332 23368999999887433 333 56668
Q ss_pred HHHHHcCCceEEcCCCCccee
Q 008028 463 LHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 463 lEAma~G~PvI~s~~gg~~e~ 483 (580)
++.|--|.-+|-+..|++.|.
T Consensus 114 l~~mk~ga~lvN~aRG~~vde 134 (178)
T PF02826_consen 114 LAKMKPGAVLVNVARGELVDE 134 (178)
T ss_dssp HHTSTTTEEEEESSSGGGB-H
T ss_pred eeccccceEEEeccchhhhhh
Confidence 889998987787777776553
No 232
>PRK09271 flavodoxin; Provisional
Probab=35.45 E-value=53 Score=30.00 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=29.4
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
|||+++-.. .+|....++..++..|.+.|++|.+.-.
T Consensus 1 mkv~IvY~S-----~tGnTe~~A~~ia~~l~~~g~~v~~~~~ 37 (160)
T PRK09271 1 MRILLAYAS-----LSGNTREVAREIEERCEEAGHEVDWVET 37 (160)
T ss_pred CeEEEEEEc-----CCchHHHHHHHHHHHHHhCCCeeEEEec
Confidence 676666542 3799999999999999999999876543
No 233
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=35.25 E-value=35 Score=33.84 Aligned_cols=28 Identities=39% Similarity=0.589 Sum_probs=23.7
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.||.|. .+.+|+.+|+.+|++|.+|=..
T Consensus 9 KGGvGKTT~~~nLA~~La~~G~kVlliD~D 38 (270)
T cd02040 9 KGGIGKSTTTQNLSAALAEMGKKVMIVGCD 38 (270)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCeEEEEEcC
Confidence 588886 5678999999999999999664
No 234
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=34.92 E-value=40 Score=35.48 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=27.4
Q ss_pred CCCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 82 QQGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 82 ~~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
+.+|||++. ||.|-+-..+++.|.++||+|.++.-
T Consensus 19 ~~~~~IlVt----------GgtGfIG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 19 SEKLRICIT----------GAGGFIASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCCEEEEE----------CCccHHHHHHHHHHHhCCCEEEEEEe
Confidence 467898754 55566667899999999999998874
No 235
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=34.78 E-value=52 Score=32.96 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=29.2
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
.++-+.|+.- ++|+|. .+++.|+++|++|.+++-+-
T Consensus 5 ~~~~~lITGA------SsGIG~---~~A~~lA~~g~~liLvaR~~ 40 (265)
T COG0300 5 KGKTALITGA------SSGIGA---ELAKQLARRGYNLILVARRE 40 (265)
T ss_pred CCcEEEEECC------CchHHH---HHHHHHHHCCCEEEEEeCcH
Confidence 3566667754 699996 89999999999999998764
No 236
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=34.67 E-value=37 Score=33.07 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=28.4
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
|||+-|... .||.|. .+..|+.+|+++|++|.+|=...
T Consensus 1 m~iI~v~s~------KGGvGKTt~a~nla~~la~~g~~VlliD~D~ 40 (246)
T TIGR03371 1 MKVIAIVGV------KGGVGKTTLTANLASALKLLGEPVLAIDLDP 40 (246)
T ss_pred CcEEEEEeC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 565555432 577776 67789999999999999997753
No 237
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=34.55 E-value=32 Score=36.83 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=30.3
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.|||+|+..- .=|.-.-...|+++|.++||+|+.+|..
T Consensus 1 ~mkil~~~~~------~~Ghv~p~~aL~~eL~~~gheV~~~~~~ 38 (406)
T COG1819 1 RMKILFVVCG------AYGHVNPCLALGKELRRRGHEVVFASTG 38 (406)
T ss_pred CceEEEEecc------ccccccchHHHHHHHHhcCCeEEEEeCH
Confidence 3899999963 1355556678999999999999999975
No 238
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=34.36 E-value=4.1e+02 Score=25.25 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=57.6
Q ss_pred ccCHHHHHHHHhhhcCCCeEEEEEecCC---hhhHHHHHHHHHHCCCCeeEeccC---ChHHHHHHHhcCCEEEecCC--
Q 008028 383 QKGSDILAQAIPKFMGGNVQIVVLGTGK---KPMEQQIEQLEIICPEKARGITKF---STPLAHKIIAGADFMLVPSR-- 454 (580)
Q Consensus 383 ~Kg~~~ll~a~~~l~~~~v~lii~G~g~---~~~~~~i~~l~~~~~~~v~~~~~~---~~~~~~~~~~~aDi~l~ps~-- 454 (580)
......+-+.+.+..+.+.+++++.+.. ..+.+.+.+.-.+++..+..+... +.+.....+..||+++++--
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~ 91 (210)
T cd03129 12 AHARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQ 91 (210)
T ss_pred cChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcH
Confidence 3344444444454433577888887754 233444444444445444444444 34566678999999998741
Q ss_pred ------CCCc-cH-HHHHHHHcCCceEEcCCCC
Q 008028 455 ------FEPC-GL-IQLHAMRYGTVPIVASTGG 479 (580)
Q Consensus 455 ------~E~~-g~-~~lEAma~G~PvI~s~~gg 479 (580)
+... .+ .+.+....|+|++.++.|.
T Consensus 92 ~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA 124 (210)
T cd03129 92 LRLLSVLRETPLLDAILKRVARGVVIGGTSAGA 124 (210)
T ss_pred HHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHH
Confidence 2222 22 4777888899888887664
No 239
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=33.36 E-value=1.5e+02 Score=21.48 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=40.9
Q ss_pred eEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 401 VQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 401 v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
..|.+.|.-...-...++++...+++++.... + ..++.++.+..... ....+|...|+|+|..+
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~--~--------~~~thvI~~~~~~~--~~~~~~~~~~~~iV~~~ 65 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGKVTSSV--S--------KKTTHVIVGSDAGP--KKLLKAIKLGIPIVTPE 65 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCEEeccc--c--------CCceEEEECCCCCc--hHHHHHHHcCCeEecHH
Confidence 46778887533457778888888776554322 1 46677777654322 12778889999877654
No 240
>PRK07308 flavodoxin; Validated
Probab=32.47 E-value=53 Score=29.35 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=29.3
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
..+|+|.|. +|....++..++..|.+.|++|.+.-.
T Consensus 3 ~~~IvY~S~-------tGnTe~iA~~ia~~l~~~g~~~~~~~~ 38 (146)
T PRK07308 3 LAKIVYASM-------TGNTEEIADIVADKLRELGHDVDVDEC 38 (146)
T ss_pred eEEEEEECC-------CchHHHHHHHHHHHHHhCCCceEEEec
Confidence 356777664 699999999999999999999887644
No 241
>PRK06932 glycerate dehydrogenase; Provisional
Probab=31.91 E-value=1.7e+02 Score=30.12 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=33.5
Q ss_pred HHHHHhcCCEEEecC--CCCC---ccHHHHHHHHcCCceEEcCCCCccee
Q 008028 439 AHKIIAGADFMLVPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps--~~E~---~g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
+..+++.||++++.. .-|+ ++-..++.|--|..+|-+..|++.|.
T Consensus 191 l~ell~~sDiv~l~~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~~Vde 240 (314)
T PRK06932 191 FEEVLKQADIVTLHCPLTETTQNLINAETLALMKPTAFLINTGRGPLVDE 240 (314)
T ss_pred HHHHHHhCCEEEEcCCCChHHhcccCHHHHHhCCCCeEEEECCCccccCH
Confidence 457899999988643 3344 55568888888988888888887664
No 242
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=31.79 E-value=57 Score=34.90 Aligned_cols=39 Identities=28% Similarity=0.388 Sum_probs=30.1
Q ss_pred CCceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
..|+|+-|... .||.|. .+..|+.+|+..|++|.+|=..
T Consensus 119 ~~~~vIav~n~------KGGvGKTTta~nLA~~LA~~G~rVLlIDlD 159 (405)
T PRK13869 119 EHLQVIAVTNF------KGGSGKTTTSAHLAQYLALQGYRVLAVDLD 159 (405)
T ss_pred CCceEEEEEcC------CCCCCHHHHHHHHHHHHHhcCCceEEEcCC
Confidence 35777666654 688887 5677899999999999998654
No 243
>PRK05693 short chain dehydrogenase; Provisional
Probab=31.18 E-value=56 Score=32.37 Aligned_cols=34 Identities=29% Similarity=0.492 Sum_probs=25.4
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
||+++|+.- +||+|. .+++.|.+.|++|.+++..
T Consensus 1 mk~vlItGa------sggiG~---~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 1 MPVVLITGC------SSGIGR---ALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCEEEEecC------CChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 566777653 578876 6778889999999887653
No 244
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=31.04 E-value=45 Score=33.18 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=27.7
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|+|++. . .||+|. .+.+|+.+|+++|++|.+|=..
T Consensus 1 ~~i~~~-g-------KGGVGKTT~~~nLA~~La~~g~rVLliD~D 37 (268)
T TIGR01281 1 MILAVY-G-------KGGIGKSTTSSNLSVAFAKLGKRVLQIGCD 37 (268)
T ss_pred CEEEEE-c-------CCcCcHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 666666 2 588886 5678999999999999998654
No 245
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=31.03 E-value=1.5e+02 Score=27.14 Aligned_cols=96 Identities=18% Similarity=0.226 Sum_probs=53.0
Q ss_pred EEEEEccCccccCHHHHHHHH------hhhcCCCe-EEE-EEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHh
Q 008028 373 LIGFIGRLEEQKGSDILAQAI------PKFMGGNV-QIV-VLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIA 444 (580)
Q Consensus 373 ~i~f~Grl~~~Kg~~~ll~a~------~~l~~~~v-~li-i~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~ 444 (580)
+++.+|.-. .|.|+.++ ++|++..+ +|+ =.|+|..-....++.... ...-.+..-+|...+. .+++
T Consensus 6 vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k-~~gl~id~y~f~psl~-e~I~ 79 (170)
T KOG3349|consen 6 VFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRK-NGGLTIDGYDFSPSLT-EDIR 79 (170)
T ss_pred EEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcc-cCCeEEEEEecCccHH-HHHh
Confidence 566666532 66666654 33443332 333 357764323333333332 2221223344555543 4788
Q ss_pred cCCEEEecCCCCCccHHHHHHHHcCCceEEcCCC
Q 008028 445 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTG 478 (580)
Q Consensus 445 ~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~g 478 (580)
.||+++- -+-.-+.+|.+..|+|.|+-...
T Consensus 80 ~AdlVIs----HAGaGS~letL~l~KPlivVvNd 109 (170)
T KOG3349|consen 80 SADLVIS----HAGAGSCLETLRLGKPLIVVVND 109 (170)
T ss_pred hccEEEe----cCCcchHHHHHHcCCCEEEEeCh
Confidence 8999982 24445799999999997766543
No 246
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=30.19 E-value=56 Score=33.25 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=29.4
Q ss_pred CCceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
..|||+-|+ . .||+|. .+.+|+-+|++.|++|-+|-..
T Consensus 2 ~~~~~iai~-~------KGGvGKTt~~~nLa~~la~~g~kVLliD~D 41 (295)
T PRK13234 2 SKLRQIAFY-G------KGGIGKSTTSQNTLAALVEMGQKILIVGCD 41 (295)
T ss_pred CcceEEEEE-C------CCCccHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 357766564 3 588887 4678999999999999999664
No 247
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=30.11 E-value=46 Score=33.13 Aligned_cols=35 Identities=37% Similarity=0.628 Sum_probs=27.7
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|.|++.. .||.|. .+.+|+.+|+++|++|.+|=..
T Consensus 1 ~~i~v~g--------KGGvGKTT~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 1 MVLAVYG--------KGGIGKSTTSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred CEEEEec--------CCCCCHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 6666663 488876 5678999999999999998664
No 248
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=30.01 E-value=66 Score=29.54 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=30.8
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
||++++-.. +.|-....+..++..|.+.|++|.+.-..
T Consensus 1 Mk~LIlYst-----r~GqT~kIA~~iA~~L~e~g~qvdi~dl~ 38 (175)
T COG4635 1 MKTLILYST-----RDGQTRKIAEYIASHLRESGIQVDIQDLH 38 (175)
T ss_pred CceEEEEec-----CCCcHHHHHHHHHHHhhhcCCeeeeeehh
Confidence 676666542 36889999999999999999999988653
No 249
>PRK06924 short chain dehydrogenase; Provisional
Probab=29.96 E-value=60 Score=31.50 Aligned_cols=33 Identities=27% Similarity=0.587 Sum_probs=24.0
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
||.++|+.- +||+|. .+++.|.++|++|.+++.
T Consensus 1 ~k~vlItGa------sggiG~---~ia~~l~~~g~~V~~~~r 33 (251)
T PRK06924 1 MRYVIITGT------SQGLGE---AIANQLLEKGTHVISISR 33 (251)
T ss_pred CcEEEEecC------CchHHH---HHHHHHHhcCCEEEEEeC
Confidence 555555532 577775 679999999999988764
No 250
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=29.95 E-value=1.7e+02 Score=29.25 Aligned_cols=37 Identities=19% Similarity=0.058 Sum_probs=29.1
Q ss_pred HhcCCEEEecCCCCCccHHHHHHHHcCCceEEcCCCC
Q 008028 443 IAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG 479 (580)
Q Consensus 443 ~~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg 479 (580)
...+|+++--+.-+..--.+..|+.+|+|+|+..+|-
T Consensus 66 ~~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigttg~ 102 (266)
T TIGR00036 66 ETDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTTGF 102 (266)
T ss_pred cCCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCCC
Confidence 3568999988766666667899999999999877753
No 251
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=29.81 E-value=1e+02 Score=28.41 Aligned_cols=39 Identities=26% Similarity=0.258 Sum_probs=29.4
Q ss_pred HHHhcCCEEEecCC--C--CCccH--HHHHHHHcCCceEEcCCCC
Q 008028 441 KIIAGADFMLVPSR--F--EPCGL--IQLHAMRYGTVPIVASTGG 479 (580)
Q Consensus 441 ~~~~~aDi~l~ps~--~--E~~g~--~~lEAma~G~PvI~s~~gg 479 (580)
.+-.++|++|++-. . |+-|+ .+.+|++.|+||+++....
T Consensus 89 al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~~ 133 (159)
T PF10649_consen 89 ALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPPR 133 (159)
T ss_pred HHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECHH
Confidence 46677999998853 3 44555 4889999999999987543
No 252
>CHL00175 minD septum-site determining protein; Validated
Probab=29.37 E-value=61 Score=32.49 Aligned_cols=37 Identities=22% Similarity=0.407 Sum_probs=28.3
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
+||+.|+.. .||.|. ++.+|+.+|++.|++|.+|=..
T Consensus 15 ~~vi~v~s~------KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSG------KGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 466666653 577765 6788999999999999998654
No 253
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=29.34 E-value=44 Score=34.31 Aligned_cols=40 Identities=20% Similarity=0.209 Sum_probs=29.6
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||+|+-. |+....--......|..+..++||+|.++.+.
T Consensus 1 m~~~~~~~---~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~ 40 (312)
T TIGR01380 1 LKVAFQMD---PIESINIGKDTTFALMEEAQKRGHELFFYEPG 40 (312)
T ss_pred CeEEEEeC---CHHHCCCCcChHHHHHHHHHHcCCEEEEEehh
Confidence 79999985 32222222345668999999999999999996
No 254
>PRK07454 short chain dehydrogenase; Provisional
Probab=29.33 E-value=60 Score=31.35 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=26.0
Q ss_pred CCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
..||.++|+.- +||+|. .+++.|.+.|++|.+++..
T Consensus 4 ~~~k~vlItG~------sg~iG~---~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 4 NSMPRALITGA------SSGIGK---ATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCCEEEEeCC------CchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 35777777642 466665 7888889999998888753
No 255
>PRK06756 flavodoxin; Provisional
Probab=28.74 E-value=78 Score=28.27 Aligned_cols=37 Identities=11% Similarity=0.186 Sum_probs=29.3
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
|||++|-.. .+|....++..+++.+.+.|++|.++-.
T Consensus 2 mkv~IiY~S-----~tGnTe~vA~~ia~~l~~~g~~v~~~~~ 38 (148)
T PRK06756 2 SKLVMIFAS-----MSGNTEEMADHIAGVIRETENEIEVIDI 38 (148)
T ss_pred ceEEEEEEC-----CCchHHHHHHHHHHHHhhcCCeEEEeeh
Confidence 566666532 2699999999999999999999987754
No 256
>PRK06101 short chain dehydrogenase; Provisional
Probab=28.65 E-value=69 Score=31.02 Aligned_cols=34 Identities=26% Similarity=0.484 Sum_probs=24.4
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|+.++|+.- +||+|. .+++.|.++|++|.+++..
T Consensus 1 ~~~vlItGa------s~giG~---~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 1 MTAVLITGA------TSGIGK---QLALDYAKQGWQVIACGRN 34 (240)
T ss_pred CcEEEEEcC------CcHHHH---HHHHHHHhCCCEEEEEECC
Confidence 455566643 577774 7888999999998887643
No 257
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=28.19 E-value=51 Score=32.98 Aligned_cols=28 Identities=29% Similarity=0.559 Sum_probs=23.7
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.||+|. .+-+|+-+|+++|.+|.+|=..
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVllvD~D 38 (273)
T PRK13232 9 KGGIGKSTTTQNLTAALSTMGNKILLVGCD 38 (273)
T ss_pred CCCCcHHHHHHHHHHHHHhhCCCeEEEecc
Confidence 588887 5678999999999999999654
No 258
>PRK06487 glycerate dehydrogenase; Provisional
Probab=28.06 E-value=1.9e+02 Score=29.72 Aligned_cols=45 Identities=22% Similarity=0.356 Sum_probs=33.8
Q ss_pred HHHHHhcCCEEEecC--CCCC---ccHHHHHHHHcCCceEEcCCCCccee
Q 008028 439 AHKIIAGADFMLVPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps--~~E~---~g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
+..+++.||++++.. .-|+ ++-..+..|--|.-+|-+..|++.|.
T Consensus 191 l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~mk~ga~lIN~aRG~vVde 240 (317)
T PRK06487 191 LDELLPQVDALTLHCPLTEHTRHLIGARELALMKPGALLINTARGGLVDE 240 (317)
T ss_pred HHHHHHhCCEEEECCCCChHHhcCcCHHHHhcCCCCeEEEECCCccccCH
Confidence 567999999988643 3344 55668888888988888888887664
No 259
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=27.99 E-value=86 Score=29.90 Aligned_cols=36 Identities=19% Similarity=0.084 Sum_probs=28.5
Q ss_pred CceEEEEeecccCccccccHHHHh--ccchHHHHhCCCeEEEEEec
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVL--GGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~--~~l~~aL~~~G~~V~vi~~~ 127 (580)
++||++-. +||.+.+- .++.+.|.+.|++|.++...
T Consensus 5 ~k~IllgV--------TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 5 GKRIGFGL--------TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCEEEEEE--------cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 56776654 57777764 79999999999999988764
No 260
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=27.94 E-value=5.1e+02 Score=24.28 Aligned_cols=109 Identities=9% Similarity=0.084 Sum_probs=61.3
Q ss_pred CeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccC-ChHHHHHHHh--cCCEEEecCCCCC----ccHHHHHHHHc---C
Q 008028 400 NVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKF-STPLAHKIIA--GADFMLVPSRFEP----CGLIQLHAMRY---G 469 (580)
Q Consensus 400 ~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~-~~~~~~~~~~--~aDi~l~ps~~E~----~g~~~lEAma~---G 469 (580)
+++++|+.+... ....+.++-...+. +.....+ +...+...+. ..|++++-....+ .|..+++.+.. +
T Consensus 3 ~~~Ilivdd~~~-~~~~l~~~L~~~~~-~~~v~~~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~ 80 (216)
T PRK10840 3 NMNVIIADDHPI-VLFGIRKSLEQIEW-VNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPS 80 (216)
T ss_pred ceEEEEECCcHH-HHHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCC
Confidence 356777766542 33444444433332 2112222 3333333333 4798887654433 57777776653 3
Q ss_pred CceEE-cCCCCc---ceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHH
Q 008028 470 TVPIV-ASTGGL---FDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 470 ~PvI~-s~~gg~---~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
+|+|+ |..... .+.+..|..|++. .+.+.+.+.++|..++.
T Consensus 81 ~~iIvls~~~~~~~~~~a~~~Ga~~yl~----------K~~~~~~l~~ai~~v~~ 125 (216)
T PRK10840 81 LSIIVLTMNNNPAILSAVLDLDIEGIVL----------KQGAPTDLPKALAALQK 125 (216)
T ss_pred CcEEEEEecCCHHHHHHHHHCCCeEEEE----------CCCCHHHHHHHHHHHHC
Confidence 45444 433321 1234567889987 88899999999988876
No 261
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=27.84 E-value=68 Score=31.34 Aligned_cols=33 Identities=30% Similarity=0.404 Sum_probs=24.9
Q ss_pred EEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 87 LVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 87 I~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|=|++.. + +|++|. .++++|.++|++|++++..
T Consensus 17 VR~itN~----S-SG~iG~---aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 17 VRGITNH----S-TGQLGK---IIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred ceeecCc----c-chHHHH---HHHHHHHhCCCEEEEEECc
Confidence 5566653 2 677886 6789999999999999743
No 262
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=27.80 E-value=63 Score=31.87 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=29.1
Q ss_pred ceEEEEeecccCccccccHHH--HhccchHHHH-hCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGD--VLGGLPPALA-ARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~-~~G~~V~vi~~~y 128 (580)
|+|+-|... .||+|. .+..|+.+|+ ..||+|.+|=...
T Consensus 2 ~~iI~v~n~------KGGvGKTT~a~nLa~~La~~~~~kVLliDlDp 42 (259)
T COG1192 2 MKIIAVANQ------KGGVGKTTTAVNLAAALAKRGGKKVLLIDLDP 42 (259)
T ss_pred CEEEEEEec------CCCccHHHHHHHHHHHHHHhcCCcEEEEeCCC
Confidence 676767665 799987 5667999999 5669999996653
No 263
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=27.64 E-value=87 Score=27.50 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=27.2
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeE-EEEE
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRV-MSVA 125 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V-~vi~ 125 (580)
|++++... .|+ .+-.+....++++++.+.||+| .|+-
T Consensus 1 ~~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vFf 38 (127)
T TIGR03012 1 KYTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVFF 38 (127)
T ss_pred CEEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 45666665 575 4557788899999999999995 4543
No 264
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=27.48 E-value=2.3e+02 Score=26.59 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=27.3
Q ss_pred hHHHHHHhcCceeEeeCHHHHHHHHccccCCcchhhhhhcCCeeEecC
Q 008028 277 NWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVN 324 (580)
Q Consensus 277 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~~I~N 324 (580)
.+.+..+...|.|.+.|+..++.+.+ .|.+.+ +|.+.-|
T Consensus 141 ~~~r~~l~~f~~i~aqs~~da~r~~~---lG~~~~------~v~v~Gn 179 (186)
T PF04413_consen 141 FLFRPLLSRFDRILAQSEADAERFRK---LGAPPE------RVHVTGN 179 (186)
T ss_dssp HHHHHHGGG-SEEEESSHHHHHHHHT---TT-S--------SEEE---
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcc------eEEEeCc
Confidence 46677888999999999999999997 787766 6666654
No 265
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=27.19 E-value=74 Score=31.16 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=24.5
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
.|+|+++.. +|++|. .+++.|.+.||+|.+++-
T Consensus 17 ~~~ilItGa-------sG~iG~---~l~~~L~~~g~~V~~~~R 49 (251)
T PLN00141 17 TKTVFVAGA-------TGRTGK---RIVEQLLAKGFAVKAGVR 49 (251)
T ss_pred CCeEEEECC-------CcHHHH---HHHHHHHhCCCEEEEEec
Confidence 467777665 477775 677888889999987764
No 266
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=27.03 E-value=1.5e+02 Score=30.68 Aligned_cols=45 Identities=27% Similarity=0.447 Sum_probs=34.4
Q ss_pred HHHHHhcCCEEEe--cCCCCCccH---HHHHHHHcCCceEEcCCCCccee
Q 008028 439 AHKIIAGADFMLV--PSRFEPCGL---IQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 439 ~~~~~~~aDi~l~--ps~~E~~g~---~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
...+++.||++.+ |...|+.++ ..++.|--|.-+|-+..|++.|.
T Consensus 194 l~ell~~sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~~VDe 243 (324)
T COG1052 194 LDELLAESDIISLHCPLTPETRHLINAEELAKMKPGAILVNTARGGLVDE 243 (324)
T ss_pred HHHHHHhCCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEECCCccccCH
Confidence 4568999999876 444566544 58889999998888888887764
No 267
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=26.86 E-value=3.5e+02 Score=25.57 Aligned_cols=32 Identities=16% Similarity=0.034 Sum_probs=22.5
Q ss_pred hcCCEEEecCCCCCccHHHHHHHHcCCceEEcC
Q 008028 444 AGADFMLVPSRFEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 444 ~~aDi~l~ps~~E~~g~~~lEAma~G~PvI~s~ 476 (580)
..=|++++....+ -...+.||-..|+|+|+-.
T Consensus 126 ~~Pdlviv~~~~~-~~~ai~Ea~~l~IP~I~i~ 157 (193)
T cd01425 126 RLPDLVIVLDPRK-EHQAIREASKLGIPVIAIV 157 (193)
T ss_pred cCCCEEEEeCCcc-chHHHHHHHHcCCCEEEEe
Confidence 4456666554322 3678999999999988865
No 268
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=26.65 E-value=62 Score=32.21 Aligned_cols=28 Identities=29% Similarity=0.564 Sum_probs=23.5
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.||.|. .+.+|+.+|++.|++|-+|=..
T Consensus 10 KGGVGKTT~~~nLA~~la~~G~kVLliD~D 39 (270)
T PRK13185 10 KGGIGKSTTSSNLSAAFAKLGKKVLQIGCD 39 (270)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 588887 5678999999999999999654
No 269
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=26.65 E-value=75 Score=30.90 Aligned_cols=33 Identities=30% Similarity=0.643 Sum_probs=23.6
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|+|++... +||+|. .+++.|.+.|++|.+++..
T Consensus 1 ~~vlItGa-------sg~iG~---~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 1 MIVLVTGA-------TAGFGE---CITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CEEEEECC-------CchHHH---HHHHHHHHCCCEEEEEECC
Confidence 55555443 477776 5788899999999887653
No 270
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=26.63 E-value=3.4e+02 Score=26.99 Aligned_cols=100 Identities=22% Similarity=0.297 Sum_probs=61.2
Q ss_pred ccCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCC-CeeEe--ccCChHHHHHH-----HhcCCEEEecC-
Q 008028 383 QKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPE-KARGI--TKFSTPLAHKI-----IAGADFMLVPS- 453 (580)
Q Consensus 383 ~Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~-~v~~~--~~~~~~~~~~~-----~~~aDi~l~ps- 453 (580)
.-|.|++...++...+++.++.++|..+.-.++..+.+..++|. ++.+. +.|+..+...+ -+++|++++--
T Consensus 91 v~G~Dl~~~Ll~~a~~~~~~vfllGgkp~V~~~a~~~l~~~~p~l~ivg~h~GYf~~~e~~~i~~~I~~s~pdil~VgmG 170 (253)
T COG1922 91 VAGTDLVEALLKRAAEEGKRVFLLGGKPGVAEQAAAKLRAKYPGLKIVGSHDGYFDPEEEEAIVERIAASGPDILLVGMG 170 (253)
T ss_pred CChHHHHHHHHHHhCccCceEEEecCCHHHHHHHHHHHHHHCCCceEEEecCCCCChhhHHHHHHHHHhcCCCEEEEeCC
Confidence 45788888888877667799999998777778888888888883 55544 33444333222 34788877642
Q ss_pred --CCCCccHHHHHHHHcCCceEEcCCCCcceeEe
Q 008028 454 --RFEPCGLIQLHAMRYGTVPIVASTGGLFDTVK 485 (580)
Q Consensus 454 --~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~ 485 (580)
+.|-+=.--.+ .+.. .|.-..||.-|+..
T Consensus 171 ~P~QE~wi~~~~~--~~~~-~v~igVGg~fDv~s 201 (253)
T COG1922 171 VPRQEIWIARNRQ--QLPV-AVAIGVGGSFDVFS 201 (253)
T ss_pred CchhHHHHHHhHH--hcCC-ceEEeccceEEEec
Confidence 22322111111 1232 45556677777653
No 271
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=26.56 E-value=72 Score=27.93 Aligned_cols=36 Identities=14% Similarity=0.009 Sum_probs=25.0
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||++.... +++ ...+.++.+.|.+.|++|.++...
T Consensus 1 k~i~l~vtG------s~~-~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTG------SIA-AYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-S------SGG-GGGHHHHHHHHHTTTSEEEEEESH
T ss_pred CEEEEEEEC------HHH-HHHHHHHHHHHhhCCCEEEEEECC
Confidence 577777753 122 233778999999999999988764
No 272
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=26.54 E-value=62 Score=32.39 Aligned_cols=28 Identities=32% Similarity=0.487 Sum_probs=23.9
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.||+|. .+-+|+-+|+++|.+|.+|=..
T Consensus 9 KGGVGKTT~~~nLA~~La~~G~rVLlID~D 38 (274)
T PRK13235 9 KGGIGKSTTTQNTVAGLAEMGKKVMVVGCD 38 (274)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 599887 5678999999999999999664
No 273
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=26.52 E-value=7.7e+02 Score=25.90 Aligned_cols=157 Identities=17% Similarity=0.156 Sum_probs=94.7
Q ss_pred EEEEccCccccCHH---HHHHHHhhhcCCCeEEEEEecC-----ChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhc
Q 008028 374 IGFIGRLEEQKGSD---ILAQAIPKFMGGNVQIVVLGTG-----KKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAG 445 (580)
Q Consensus 374 i~f~Grl~~~Kg~~---~ll~a~~~l~~~~v~lii~G~g-----~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 445 (580)
=+|=-++.--|..- ++.+++.+-...-++.+.+-.. .+++...+..+..-..++..+.++|+-+.. +-+.
T Consensus 193 avfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~~~p~f--la~~ 270 (364)
T PF10933_consen 193 AVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYHLKEHPTFVNFANSLDLVRDGKASFEGRFDFPDF--LAQH 270 (364)
T ss_pred EEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchhhhcCHHHHHHHHhhHHhhcCeeEEeeecChHHH--HHhC
Confidence 34444555556533 4445554443345666655542 234555555555544467888888877765 5566
Q ss_pred CCEEEecCCCC-CccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHHhcCh
Q 008028 446 ADFMLVPSRFE-PCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGT 524 (580)
Q Consensus 446 aDi~l~ps~~E-~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 524 (580)
.|++|.-- || +.--..+||+.-|=|+|-.+- .+.+ .|+-+ +..|..+=++.|.++++..+.
T Consensus 271 tD~VvSHq-WeN~lNYlY~daLyggYPLVHNS~-----~l~d--~GYYY----------~~fD~~~G~r~L~~A~~~HD~ 332 (364)
T PF10933_consen 271 TDAVVSHQ-WENPLNYLYYDALYGGYPLVHNSP-----LLKD--VGYYY----------PDFDAFEGARQLLRAIREHDA 332 (364)
T ss_pred CCEEEecc-ccchhhHHHHHHHhcCCCcccCcc-----hhcc--cCcCC----------CCccHHHHHHHHHHHHHHccc
Confidence 78877332 55 455678999999998876652 3443 77777 888999999999999986432
Q ss_pred --hHHHHHHHHHHHhcCCch--HHHHHHHHH
Q 008028 525 --PALKEMIQNCMALDLSWK--EPARLWEKM 551 (580)
Q Consensus 525 --~~~~~~~~~~~~~~fs~~--~~a~~~~~~ 551 (580)
+.+.+..++++. .++.. .-++.|.+.
T Consensus 333 ~~~~Y~~ra~~~l~-~~~p~n~~nv~~y~~~ 362 (364)
T PF10933_consen 333 DLDAYRARARRLLD-RLSPENPANVRAYEAR 362 (364)
T ss_pred cHHHHHHHHHHHHH-hhCCCCHHHHHHHHHh
Confidence 344444444443 33333 334455443
No 274
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=26.02 E-value=8.6e+02 Score=26.26 Aligned_cols=93 Identities=8% Similarity=0.035 Sum_probs=50.9
Q ss_pred CCEEEecCCCC--CccHHHHHHHHcCCceEEcCCCCcceeEecCc----eeEEEeecccccccCCcccHHHHHHHHHHHH
Q 008028 446 ADFMLVPSRFE--PCGLIQLHAMRYGTVPIVASTGGLFDTVKEGI----TGFQMRSFHVECDRVDLADVAAIAKHVNRAV 519 (580)
Q Consensus 446 aDi~l~ps~~E--~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~----~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll 519 (580)
.+-++++-..+ -.|..+-=+...|+|+....+|--.+-+.... ..-++ .-+|+..+.+.+.+.+
T Consensus 241 i~giIlTKlD~~~~~G~~lsi~~~~~~PI~fi~~Ge~i~dl~~f~p~~~~~~iL----------g~gD~~~l~e~~~~~~ 310 (428)
T TIGR00959 241 LTGVVLTKLDGDARGGAALSVRSVTGKPIKFIGVGEKIDDLEPFHPERMASRIL----------GMGDILSLVEKAQEVV 310 (428)
T ss_pred CCEEEEeCccCcccccHHHHHHHHHCcCEEEEeCCCChhhCccCCHHHHHHHHh----------CCCChHHHHHHHHHhh
Confidence 34445443322 25555555667899998877764333222211 11111 3456666666666655
Q ss_pred HhcChhHHHHHHHHHHHhcCCchHHHHHHHHH
Q 008028 520 ATYGTPALKEMIQNCMALDLSWKEPARLWEKM 551 (580)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~ 551 (580)
+ .++..++.++-+.-.|+.+.+.+++..+
T Consensus 311 ~---~~~~~~~~~~~~~~~f~l~d~~~q~~~~ 339 (428)
T TIGR00959 311 D---EEEAKKLAEKMKKGQFDLEDFLEQLRQI 339 (428)
T ss_pred C---HHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4 2334445554455679998887777665
No 275
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=25.89 E-value=5e+02 Score=23.46 Aligned_cols=107 Identities=16% Similarity=0.202 Sum_probs=60.3
Q ss_pred EEEEEecCChhhHHHHHHHHHHCCCCeeEeccC-ChHHHHHHH--hcCCEEEecCCC-CCccHHHHHHHHcCCceEEcCC
Q 008028 402 QIVVLGTGKKPMEQQIEQLEIICPEKARGITKF-STPLAHKII--AGADFMLVPSRF-EPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 402 ~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~-~~~~~~~~~--~~aDi~l~ps~~-E~~g~~~lEAma~G~PvI~s~~ 477 (580)
+++|+.+.+. ....+.+.-...++ ......+ +...+...+ ...|++++-... +.-|...++.+....|+|+...
T Consensus 3 ~ilivd~~~~-~~~~l~~~L~~~~~-~~~~~~~~~~~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~ 80 (196)
T PRK10360 3 TVALIDDHLI-VRSGFAQLLGLEPD-LQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSV 80 (196)
T ss_pred EEEEECCcHH-HHHHHHHHHccCCC-cEEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEEC
Confidence 5667776542 33344433332221 2111222 223332333 346888876543 4567777877777777655442
Q ss_pred CCcce----eEecCceeEEEeecccccccCCcccHHHHHHHHHHHHH
Q 008028 478 GGLFD----TVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 478 gg~~e----~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
..-.+ .+..|..+++. .|.+.+.+.++|..++.
T Consensus 81 ~~~~~~~~~~~~~ga~~~i~----------kp~~~~~l~~~i~~~~~ 117 (196)
T PRK10360 81 HDSPALVEQALNAGARGFLS----------KRCSPDELIAAVHTVAT 117 (196)
T ss_pred CCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHc
Confidence 22222 23456678876 89999999999988876
No 276
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=25.81 E-value=6.2e+02 Score=24.57 Aligned_cols=118 Identities=19% Similarity=0.289 Sum_probs=62.5
Q ss_pred CcEEEEEccC-ccccCHHHHHHHHhhhcCCC--eEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCC
Q 008028 371 IPLIGFIGRL-EEQKGSDILAQAIPKFMGGN--VQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGAD 447 (580)
Q Consensus 371 ~~~i~f~Grl-~~~Kg~~~ll~a~~~l~~~~--v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aD 447 (580)
..+++|+|.- .+.+. .|++..++|++.+ +.+|..|....+ -+.+.++......+ =.+|.
T Consensus 108 ~riVvFvGSpi~e~ek--eLv~~akrlkk~~Vaidii~FGE~~~~-~e~l~~fida~N~~---------------~~gsh 169 (259)
T KOG2884|consen 108 QRIVVFVGSPIEESEK--ELVKLAKRLKKNKVAIDIINFGEAENN-TEKLFEFIDALNGK---------------GDGSH 169 (259)
T ss_pred eEEEEEecCcchhhHH--HHHHHHHHHHhcCeeEEEEEecccccc-HHHHHHHHHHhcCC---------------CCCce
Confidence 4578899874 33333 6777777887754 455666654422 22333333221100 12455
Q ss_pred EEEecCCCCCccHHHHHHHHcCCceEEcCCCCcceeEecCceeEEEeecccccccCCcccHHHHHHHHHHHHH
Q 008028 448 FMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 448 i~l~ps~~E~~g~~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~~~~~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
++.+|+- + .++-...-.|++.-+.|+..--. +.+|-.| .|.+ +|.++-+||.+|+--++
T Consensus 170 lv~Vppg----~--~L~d~l~ssPii~ge~g~a~~~~--~a~g~~f-~fgv-----dp~~DPELAlALRlSME 228 (259)
T KOG2884|consen 170 LVSVPPG----P--LLSDALLSSPIIQGEDGGAAAGL--GANGMDF-EFGV-----DPEDDPELALALRLSME 228 (259)
T ss_pred EEEeCCC----c--cHHHHhhcCceeccCcccccccc--ccccccc-ccCC-----CcccCHHHHHHHHhhHH
Confidence 6666642 1 34444455667766644432222 2232222 3444 88888899999976666
No 277
>PRK08177 short chain dehydrogenase; Provisional
Probab=25.74 E-value=81 Score=30.12 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=24.8
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
||.++|+.. +||+|. .+++.|++.|++|.+++..
T Consensus 1 ~k~vlItG~------sg~iG~---~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 1 KRTALIIGA------SRGLGL---GLVDRLLERGWQVTATVRG 34 (225)
T ss_pred CCEEEEeCC------CchHHH---HHHHHHHhCCCEEEEEeCC
Confidence 455666543 577776 5788899999999888764
No 278
>PRK05993 short chain dehydrogenase; Provisional
Probab=25.65 E-value=88 Score=31.11 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=24.8
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
+|.++|+.- +||+|. .+++.|++.|++|.+++..
T Consensus 4 ~k~vlItGa------sggiG~---~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 4 KRSILITGC------SSGIGA---YCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCEEEEeCC------CcHHHH---HHHHHHHHCCCEEEEEECC
Confidence 456666643 577875 5788899999999887654
No 279
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=25.63 E-value=67 Score=32.22 Aligned_cols=28 Identities=32% Similarity=0.608 Sum_probs=23.7
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.||+|. .+.+|+.+|+++|++|.+|=..
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVLliD~D 38 (279)
T PRK13230 9 KGGIGKSTTVCNIAAALAESGKKVLVVGCD 38 (279)
T ss_pred CCCCcHHHHHHHHHHHHHhCCCEEEEEeeC
Confidence 588887 5678999999999999999664
No 280
>PRK13243 glyoxylate reductase; Reviewed
Probab=25.58 E-value=2.3e+02 Score=29.36 Aligned_cols=45 Identities=18% Similarity=0.268 Sum_probs=32.3
Q ss_pred HHHHHhcCCEEEecCC--CCC---ccHHHHHHHHcCCceEEcCCCCccee
Q 008028 439 AHKIIAGADFMLVPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps~--~E~---~g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
...+++.||++++.-. -|. ++-..+++|--|.-+|-+..|+..+.
T Consensus 198 l~ell~~aDiV~l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd~ 247 (333)
T PRK13243 198 LEELLRESDFVSLHVPLTKETYHMINEERLKLMKPTAILVNTARGKVVDT 247 (333)
T ss_pred HHHHHhhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECcCchhcCH
Confidence 4458999999886543 233 44568888888888888888876654
No 281
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=25.38 E-value=4.8e+02 Score=26.20 Aligned_cols=91 Identities=12% Similarity=-0.013 Sum_probs=44.1
Q ss_pred CHHHHHHHHhhhcCCCe-EE-EEEecCC---hhhHHHHHHHHHHCCCCeeEeccCChHHH----HHHHhcCCEEEecCC-
Q 008028 385 GSDILAQAIPKFMGGNV-QI-VVLGTGK---KPMEQQIEQLEIICPEKARGITKFSTPLA----HKIIAGADFMLVPSR- 454 (580)
Q Consensus 385 g~~~ll~a~~~l~~~~v-~l-ii~G~g~---~~~~~~i~~l~~~~~~~v~~~~~~~~~~~----~~~~~~aDi~l~ps~- 454 (580)
-+..-++.+.++. |++ ++ ++..+.. ....+.+++...+++.++....--+.... ..+-...|++++++.
T Consensus 116 ~~~~~l~l~~~l~-P~~k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~ 194 (294)
T PF04392_consen 116 PIEKQLELIKKLF-PDAKRIGVLYDPSEPNSVAQIEQLRKAAKKLGIELVEIPVPSSEDLEQALEALAEKVDALYLLPDN 194 (294)
T ss_dssp -HHHHHHHHHHHS-TT--EEEEEEETT-HHHHHHHHHHHHHHHHTT-EEEEEEESSGGGHHHHHHHHCTT-SEEEE-S-H
T ss_pred CHHHHHHHHHHhC-CCCCEEEEEecCCCccHHHHHHHHHHHHHHcCCEEEEEecCcHhHHHHHHHHhhccCCEEEEECCc
Confidence 3444444444443 222 34 3344333 23556677767777655544333333332 245567898877764
Q ss_pred --CCCccHHHHHHHHcCCceEEcC
Q 008028 455 --FEPCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 455 --~E~~g~~~lEAma~G~PvI~s~ 476 (580)
..........+..+++|++++.
T Consensus 195 ~~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 195 LVDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp HHHHTHHHHHHHCCCTT--EEESS
T ss_pred chHhHHHHHHHHHHhcCCCEEECC
Confidence 2334445666777899998876
No 282
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=24.98 E-value=3.1e+02 Score=25.87 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=22.9
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCC--eEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGH--RVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~--~V~vi~~~ 127 (580)
|||+++.. |-|..+..+.+++.+.++ +|.+|.+.
T Consensus 1 ~riail~s---------g~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLIS---------GNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEEc---------CCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 68888874 345666788888887766 45554444
No 283
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=24.97 E-value=30 Score=34.79 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=39.3
Q ss_pred CCceEEEec-CCccchHHHHHHHhhhccCccccceEEE-------cC-CCC---CCCCCccch----HHHHHHhcCceeE
Q 008028 227 GEDVLFIGN-DWHTALLPCYLKFMYQSKGIHKNAKRLC-------RP-RYD---KPVKGRKIN----WMKAGILESDRVL 290 (580)
Q Consensus 227 ~pDvVih~~-~~~~~~l~~~l~~~~~~~gi~~~~~~~~-------l~-~~~---~~~~~~~~~----~~~~~~~~ad~vi 290 (580)
+.| |+|+. .+.++++++.++...+.+-+...+-+++ +. .+. .......+. +.+.++..||.|+
T Consensus 172 ~ad-vyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 172 KAD-VYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCC-EEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 358 78875 5566777777777765543333333322 11 111 111111122 2356678999999
Q ss_pred eeCHHHHHH
Q 008028 291 TVSPHYAKE 299 (580)
Q Consensus 291 ~vS~~~~~~ 299 (580)
++++.-.+.
T Consensus 251 ~l~~~n~~~ 259 (268)
T PF11997_consen 251 PLYEYNREW 259 (268)
T ss_pred ccchhhHHH
Confidence 999964444
No 284
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=24.87 E-value=2.9e+02 Score=29.31 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=54.1
Q ss_pred CCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCC--------hHHHHHHHhcCCEEE--ecCCCC----Ccc---HH
Q 008028 399 GNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFS--------TPLAHKIIAGADFML--VPSRFE----PCG---LI 461 (580)
Q Consensus 399 ~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~--------~~~~~~~~~~aDi~l--~ps~~E----~~g---~~ 461 (580)
..-.+-|+|-|. +-+.+.+....++-++...-.+. ...+..+++.||+++ .|...+ +.+ -.
T Consensus 115 ~gktvGIIG~G~--IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~~li~~~ 192 (378)
T PRK15438 115 HDRTVGIVGVGN--VGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGPYKTLHLADEK 192 (378)
T ss_pred CCCEEEEECcCH--HHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcccccccccCHH
Confidence 356888899886 45555555555655555543210 112457899999998 454332 444 45
Q ss_pred HHHHHHcCCceEEcCCCCccee
Q 008028 462 QLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 462 ~lEAma~G~PvI~s~~gg~~e~ 483 (580)
.++.|.-|..+|-+..|++.|.
T Consensus 193 ~l~~mk~gailIN~aRG~vVDe 214 (378)
T PRK15438 193 LIRSLKPGAILINACRGAVVDN 214 (378)
T ss_pred HHhcCCCCcEEEECCCchhcCH
Confidence 8888888988888888887664
No 285
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=24.70 E-value=41 Score=29.64 Aligned_cols=36 Identities=36% Similarity=0.494 Sum_probs=26.0
Q ss_pred CCCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 82 QQGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 82 ~~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
...|||.||.. |++-..|+++|.+.||+|..+..+.
T Consensus 8 ~~~l~I~iIGa-----------GrVG~~La~aL~~ag~~v~~v~srs 43 (127)
T PF10727_consen 8 AARLKIGIIGA-----------GRVGTALARALARAGHEVVGVYSRS 43 (127)
T ss_dssp ----EEEEECT-----------SCCCCHHHHHHHHTTSEEEEESSCH
T ss_pred CCccEEEEECC-----------CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 34689999875 4555689999999999998887653
No 286
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=24.53 E-value=2.7e+02 Score=28.83 Aligned_cols=45 Identities=22% Similarity=0.304 Sum_probs=33.2
Q ss_pred HHHHHhcCCEEEec--CCCCC---ccHHHHHHHHcCCceEEcCCCCccee
Q 008028 439 AHKIIAGADFMLVP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 439 ~~~~~~~aDi~l~p--s~~E~---~g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
+..+++.||++++. ..-|+ ++-..++.|--|.-+|-+..|++.|.
T Consensus 194 l~ell~~sDvv~lh~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~vVde 243 (323)
T PRK15409 194 LDTLLQESDFVCIILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDE 243 (323)
T ss_pred HHHHHHhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECCCccccCH
Confidence 34689999998763 23344 55568999988988888888887654
No 287
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=24.30 E-value=5.7e+02 Score=24.65 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=42.3
Q ss_pred cCHHHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccC-ChHHHH-HHHhcCCEEEecCC
Q 008028 384 KGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKF-STPLAH-KIIAGADFMLVPSR 454 (580)
Q Consensus 384 Kg~~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~-~~~~~~-~~~~~aDi~l~ps~ 454 (580)
...+..++..+.+.+..++++=++-..+.-.+.++++..++++..++.+.. +..+++ .+-++||+++.|..
T Consensus 24 ~~~~~a~~i~~al~~~Gi~~iEitl~~~~~~~~I~~l~~~~p~~~IGAGTVl~~~~a~~a~~aGA~FivsP~~ 96 (212)
T PRK05718 24 NKLEDAVPLAKALVAGGLPVLEVTLRTPAALEAIRLIAKEVPEALIGAGTVLNPEQLAQAIEAGAQFIVSPGL 96 (212)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccHHHHHHHHHHHCCCCEEEEeeccCHHHHHHHHHcCCCEEECCCC
Confidence 445566666666655445544444433345667777777787655555544 334433 46778888888764
No 288
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=24.28 E-value=46 Score=32.47 Aligned_cols=27 Identities=26% Similarity=0.368 Sum_probs=23.2
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 101 GGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 101 GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
-|+|++-..+++.|+++||+|.+|=-.
T Consensus 6 iG~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 6 IGAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred ECCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 466788889999999999999999664
No 289
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=24.26 E-value=74 Score=31.17 Aligned_cols=28 Identities=32% Similarity=0.547 Sum_probs=23.5
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.||.|. .+..|+.+|++.|.+|.+|=..
T Consensus 10 kGGvGKTt~a~~lA~~la~~g~~vlliD~D 39 (261)
T TIGR01968 10 KGGVGKTTTTANLGTALARLGKKVVLIDAD 39 (261)
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 588777 7788999999999999998554
No 290
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=24.24 E-value=6.6e+02 Score=24.96 Aligned_cols=89 Identities=10% Similarity=-0.070 Sum_probs=56.9
Q ss_pred HHHHHHHhhhcCCCeEEEEEec-----------C-ChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCC
Q 008028 387 DILAQAIPKFMGGNVQIVVLGT-----------G-KKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSR 454 (580)
Q Consensus 387 ~~ll~a~~~l~~~~v~lii~G~-----------g-~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~ 454 (580)
+.+++..+.+++..++++..|. | +.+-.+.+.+.+.+++-.+ ....++...+..+...+|++=++|+
T Consensus 29 e~~~~~a~~~~~~g~~~~r~g~~kpRts~~sf~G~G~~gl~~L~~~~~~~Gl~~-~Tev~d~~~v~~~~e~vdilqIgs~ 107 (250)
T PRK13397 29 DHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGLQGIRYLHEVCQEFGLLS-VSEIMSERQLEEAYDYLDVIQVGAR 107 (250)
T ss_pred HHHHHHHHHHHHcCCCEEEecccCCCCCCcccCCCCHHHHHHHHHHHHHcCCCE-EEeeCCHHHHHHHHhcCCEEEECcc
Confidence 4455555555555778887776 1 1234556666777766433 3345677777777788999999996
Q ss_pred CCCccHHHHHHH-HcCCceEEcCC
Q 008028 455 FEPCGLIQLHAM-RYGTVPIVAST 477 (580)
Q Consensus 455 ~E~~g~~~lEAm-a~G~PvI~s~~ 477 (580)
. ..-..+++++ ..|+||+.+.-
T Consensus 108 ~-~~n~~LL~~va~tgkPVilk~G 130 (250)
T PRK13397 108 N-MQNFEFLKTLSHIDKPILFKRG 130 (250)
T ss_pred c-ccCHHHHHHHHccCCeEEEeCC
Confidence 3 2335566655 56999988874
No 291
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=24.00 E-value=69 Score=29.67 Aligned_cols=29 Identities=31% Similarity=0.588 Sum_probs=23.1
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEecC
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
.||.|. .+..|+.+|+++|++|.++-...
T Consensus 7 kGG~GKTt~a~~la~~la~~g~~VlliD~D~ 37 (195)
T PF01656_consen 7 KGGVGKTTIAANLAQALARKGKKVLLIDLDP 37 (195)
T ss_dssp STTSSHHHHHHHHHHHHHHTTS-EEEEEEST
T ss_pred CCCccHHHHHHHHHhccccccccccccccCc
Confidence 477765 67789999999999999998753
No 292
>PRK06180 short chain dehydrogenase; Provisional
Probab=23.97 E-value=99 Score=30.70 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=23.8
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
+|.++|+.- +||+|. .+++.|.++|++|.+++..
T Consensus 4 ~~~vlVtGa------sggiG~---~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 4 MKTWLITGV------SSGFGR---ALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCEEEEecC------CChHHH---HHHHHHHhCcCEEEEEeCC
Confidence 344555543 577776 6778889999998887653
No 293
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=23.69 E-value=79 Score=31.55 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=27.3
Q ss_pred CCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCC
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYD 129 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~ 129 (580)
..|||++....- .. +-| +..|.++|++.| +|+|++|..+
T Consensus 4 ~~M~ILltNDDG-i~--a~G----i~aL~~~l~~~g-~V~VvAP~~~ 42 (257)
T PRK13932 4 KKPHILVCNDDG-IE--GEG----IHVLAASMKKIG-RVTVVAPAEP 42 (257)
T ss_pred CCCEEEEECCCC-CC--CHH----HHHHHHHHHhCC-CEEEEcCCCC
Confidence 459999777752 11 233 456778888888 8999999753
No 294
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=23.64 E-value=82 Score=31.86 Aligned_cols=31 Identities=29% Similarity=0.461 Sum_probs=23.6
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
|||+++.. |++|. .++..|++.||+|.+++.
T Consensus 1 mkI~IiG~--------G~iG~---~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA--------GAVGG---TFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC--------CHHHH---HHHHHHHHCCCceEEEec
Confidence 78888873 55654 566777888999999876
No 295
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=23.62 E-value=25 Score=38.54 Aligned_cols=29 Identities=28% Similarity=0.263 Sum_probs=22.7
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
.++.-..+..++++|+++||+|+++++..
T Consensus 9 ~~SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 9 AYSHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp ---SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred CcCHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 35677888999999999999999999864
No 296
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=23.60 E-value=80 Score=33.59 Aligned_cols=37 Identities=24% Similarity=0.254 Sum_probs=28.7
Q ss_pred CceEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEe
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~ 126 (580)
.++|+-|+.. .||.|. .+..|+.+|+.+|++|.+|=.
T Consensus 105 ~~~vIav~n~------KGGVGKTTta~nLA~~LA~~G~rVLlIDl 143 (387)
T PHA02519 105 NPVVLAVMSH------KGGVYKTSSAVHTAQWLALQGHRVLLIEG 143 (387)
T ss_pred CceEEEEecC------CCCCcHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 4666666643 688887 567799999999999998864
No 297
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=23.56 E-value=75 Score=30.93 Aligned_cols=28 Identities=32% Similarity=0.564 Sum_probs=22.9
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.||.|. .+..|+.+|+++|++|.+|=..
T Consensus 9 KGGvGKTt~a~~LA~~la~~g~~VlliD~D 38 (251)
T TIGR01969 9 KGGTGKTTITANLGVALAKLGKKVLALDAD 38 (251)
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 577775 5667999999999999999664
No 298
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=23.56 E-value=98 Score=29.60 Aligned_cols=25 Identities=28% Similarity=0.486 Sum_probs=19.0
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
+||+|. .+++.|.++|++|.+++..
T Consensus 14 sg~iG~---~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 14 SRGIGR---AIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 477775 6788889999998666643
No 299
>PRK05246 glutathione synthetase; Provisional
Probab=23.55 E-value=63 Score=33.22 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=29.7
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||+|+-. |+....--......|+++..++||+|.++++.
T Consensus 2 ~~~~~~~~---~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~ 41 (316)
T PRK05246 2 MKVAFQMD---PIESINIKKDSTFAMMLEAQRRGHELFYYEPD 41 (316)
T ss_pred ceEEEEeC---CHHHCCCCCChHHHHHHHHHHcCCEEEEEehh
Confidence 89999985 33222333344567999999999999999996
No 300
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=23.48 E-value=2.6e+02 Score=25.84 Aligned_cols=79 Identities=16% Similarity=0.093 Sum_probs=38.0
Q ss_pred HHHHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHH-----HHhcCCEEEecCCCCCccHH
Q 008028 387 DILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHK-----IIAGADFMLVPSRFEPCGLI 461 (580)
Q Consensus 387 ~~ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~-----~~~~aDi~l~ps~~E~~g~~ 461 (580)
..+++++.+.++..-++.++|-... ...+..+..-++.++.....-+.+.+.. .-.++|+++ +.+.+
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~--~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~~G~~viV------Gg~~~ 135 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNI--IPGLESIEELLGVDIKIYPYDSEEEIEAAIKQAKAEGVDVIV------GGGVV 135 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS---SCCHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHHTT--EEE------ESHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccc--cHHHHHHHHHhCCceEEEEECCHHHHHHHHHHHHHcCCcEEE------CCHHH
Confidence 3566777766665566677776541 1112333332232344433333333332 234677777 55556
Q ss_pred HHHHHHcCCceE
Q 008028 462 QLHAMRYGTVPI 473 (580)
Q Consensus 462 ~lEAma~G~PvI 473 (580)
.--|-.+|.|.+
T Consensus 136 ~~~A~~~gl~~v 147 (176)
T PF06506_consen 136 CRLARKLGLPGV 147 (176)
T ss_dssp HHHHHHTTSEEE
T ss_pred HHHHHHcCCcEE
Confidence 666666666543
No 301
>PLN02928 oxidoreductase family protein
Probab=23.47 E-value=2.6e+02 Score=29.25 Aligned_cols=46 Identities=22% Similarity=0.257 Sum_probs=32.9
Q ss_pred HHHHHHhcCCEEEecC--CCCC---ccHHHHHHHHcCCceEEcCCCCccee
Q 008028 438 LAHKIIAGADFMLVPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 438 ~~~~~~~~aDi~l~ps--~~E~---~g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
.+..+++.||++++.. .-|+ ++-..+..|--|..+|-+..|++.|.
T Consensus 219 ~L~ell~~aDiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde 269 (347)
T PLN02928 219 DIYEFAGEADIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDY 269 (347)
T ss_pred CHHHHHhhCCEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCccccCH
Confidence 3557999999988743 2344 45568888888887888878876653
No 302
>PRK12827 short chain dehydrogenase; Provisional
Probab=23.20 E-value=95 Score=29.86 Aligned_cols=33 Identities=30% Similarity=0.553 Sum_probs=24.5
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
+|+|++... +||+|. .+++.|.++|++|.++..
T Consensus 6 ~~~ilItGa-------sg~iG~---~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 6 SRRVLITGG-------SGGLGR---AIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCEEEEECC-------CChHHH---HHHHHHHHCCCeEEEEcC
Confidence 456665543 477775 788999999999988764
No 303
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=23.17 E-value=88 Score=32.01 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=22.3
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
|||++... +|++| ..+++.|.+.||+|.++..
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~~ 32 (338)
T PRK10675 1 MRVLVTGG-------SGYIG---SHTCVQLLQNGHDVVILDN 32 (338)
T ss_pred CeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEec
Confidence 56655443 35555 4678899999999998753
No 304
>PLN02572 UDP-sulfoquinovose synthase
Probab=23.02 E-value=1.4e+02 Score=32.38 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=23.4
Q ss_pred CCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEE
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVA 125 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~ 125 (580)
+.|+|++... +|++|. .|++.|.+.|++|.++.
T Consensus 46 ~~k~VLVTGa-------tGfIGs---~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 46 KKKKVMVIGG-------DGYCGW---ATALHLSKRGYEVAIVD 78 (442)
T ss_pred cCCEEEEECC-------CcHHHH---HHHHHHHHCCCeEEEEe
Confidence 3466654433 466665 78899999999999875
No 305
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=23.01 E-value=3.5e+02 Score=24.64 Aligned_cols=75 Identities=13% Similarity=0.178 Sum_probs=47.0
Q ss_pred cEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCCh------hhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhc
Q 008028 372 PLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKK------PMEQQIEQLEIICPEKARGITKFSTPLAHKIIAG 445 (580)
Q Consensus 372 ~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~~------~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 445 (580)
..|+|+|- ....=..-++.++.++ +..+.+++..+- ++.+..++...+.+.++... +.....+.+
T Consensus 3 l~i~~vGD-~~~rv~~Sl~~~~~~~---g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~g~~i~~~-----~~~~e~l~~ 73 (158)
T PF00185_consen 3 LKIAYVGD-GHNRVAHSLIELLAKF---GMEVVLIAPEGLRYPPDPEVLEKAKKNAKKNGGKITIT-----DDIEEALKG 73 (158)
T ss_dssp EEEEEESS-TTSHHHHHHHHHHHHT---TSEEEEESSGGGGGSHHHHHHHHHHHHHHHHTTEEEEE-----SSHHHHHTT
T ss_pred CEEEEECC-CCChHHHHHHHHHHHc---CCEEEEECCCcccCCCCHHHHHHHHHHHHHhCCCeEEE-----eCHHHhcCC
Confidence 47999995 3344466777777777 677888887541 23444455555555455444 223347999
Q ss_pred CCEEEecCCC
Q 008028 446 ADFMLVPSRF 455 (580)
Q Consensus 446 aDi~l~ps~~ 455 (580)
+|++......
T Consensus 74 aDvvy~~~~~ 83 (158)
T PF00185_consen 74 ADVVYTDRWQ 83 (158)
T ss_dssp -SEEEEESSS
T ss_pred CCEEEEcCcc
Confidence 9998877764
No 306
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=22.92 E-value=94 Score=29.58 Aligned_cols=38 Identities=24% Similarity=0.279 Sum_probs=26.9
Q ss_pred CceEEEEeecccCccccccHHH--HhccchHHHHh-CCCeEEEEEec
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGD--VLGGLPPALAA-RGHRVMSVAPR 127 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~-~G~~V~vi~~~ 127 (580)
.|||+.|+.. .||.|. .+..|+.+|+. .|++|.+|=..
T Consensus 34 ~~~vi~v~s~------kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 34 NNNLIMVTSS------LPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCeEEEEECC------CCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 3565555542 465554 67889999996 69999999765
No 307
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=22.84 E-value=85 Score=29.80 Aligned_cols=34 Identities=32% Similarity=0.442 Sum_probs=28.1
Q ss_pred EEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 87 LVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 87 I~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
++|+|. -||....-..++.+|++.|..|+.|-..
T Consensus 5 ~v~~SG-------DgGw~~~d~~~a~~l~~~G~~VvGvdsl 38 (192)
T PF06057_consen 5 AVFFSG-------DGGWRDLDKQIAEALAKQGVPVVGVDSL 38 (192)
T ss_pred EEEEeC-------CCCchhhhHHHHHHHHHCCCeEEEechH
Confidence 455665 3899999999999999999999988653
No 308
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=22.72 E-value=3.5e+02 Score=27.11 Aligned_cols=118 Identities=15% Similarity=0.161 Sum_probs=64.2
Q ss_pred EEEEEccCccccCHHHHHHHHhhhcC--CCeEEEEEecCCh---------hhHHHHHHHHHHCCCCeeEeccCChHHHHH
Q 008028 373 LIGFIGRLEEQKGSDILAQAIPKFMG--GNVQIVVLGTGKK---------PMEQQIEQLEIICPEKARGITKFSTPLAHK 441 (580)
Q Consensus 373 ~i~f~Grl~~~Kg~~~ll~a~~~l~~--~~v~lii~G~g~~---------~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~ 441 (580)
.-+++|.-.+.+-+..+.++.+.-.+ -++-+.+...|+. .+..+..+++.
T Consensus 116 ~~Vy~Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaa------------------- 176 (265)
T COG1830 116 ATVYVGSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDEYHRDADLVGYAARLAA------------------- 176 (265)
T ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCcccccccccHHHHHHHHHHHH-------------------
Confidence 56788888887777777777666544 2444445555541 01122222222
Q ss_pred HHhcCCEEEecCC--CCCccHHHHHHHHcCCceEEcCCCCc----------ceeEecCceeEEEe--ecccccccCCccc
Q 008028 442 IIAGADFMLVPSR--FEPCGLIQLHAMRYGTVPIVASTGGL----------FDTVKEGITGFQMR--SFHVECDRVDLAD 507 (580)
Q Consensus 442 ~~~~aDi~l~ps~--~E~~g~~~lEAma~G~PvI~s~~gg~----------~e~i~~~~~G~~~~--~~~~~~~~v~~~d 507 (580)
--+||++=.... .|.|-.++ -+||+|||++.-+-. .+.+..|..|..+| -| ...+
T Consensus 177 -elGADIiK~~ytg~~e~F~~vv---~~~~vpVviaGG~k~~~~~~~l~~~~~ai~aGa~G~~~GRNif-------Q~~~ 245 (265)
T COG1830 177 -ELGADIIKTKYTGDPESFRRVV---AACGVPVVIAGGPKTETEREFLEMVTAAIEAGAMGVAVGRNIF-------QHED 245 (265)
T ss_pred -HhcCCeEeecCCCChHHHHHHH---HhCCCCEEEeCCCCCCChHHHHHHHHHHHHccCcchhhhhhhh-------ccCC
Confidence 336666544332 13333222 357788887763322 22344566677666 33 5667
Q ss_pred HHHHHHHHHHHHH
Q 008028 508 VAAIAKHVNRAVA 520 (580)
Q Consensus 508 ~~~la~~l~~ll~ 520 (580)
++.++++|..+.-
T Consensus 246 p~~m~~Ai~~Ivh 258 (265)
T COG1830 246 PEAMVKAIQAIVH 258 (265)
T ss_pred hHHHHHHHHHHhc
Confidence 7777777777654
No 309
>PRK07574 formate dehydrogenase; Provisional
Probab=22.62 E-value=2.5e+02 Score=29.81 Aligned_cols=45 Identities=16% Similarity=0.223 Sum_probs=32.5
Q ss_pred HHHHHhcCCEEEecCC--CCC---ccHHHHHHHHcCCceEEcCCCCccee
Q 008028 439 AHKIIAGADFMLVPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps~--~E~---~g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
+..+++.||++++... -|. ++-..+..|--|.-+|-+..|++.+.
T Consensus 242 l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe 291 (385)
T PRK07574 242 FDSLVSVCDVVTIHCPLHPETEHLFDADVLSRMKRGSYLVNTARGKIVDR 291 (385)
T ss_pred HHHHhhcCCEEEEcCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCchhhH
Confidence 4468999999876543 233 44568888988988888888876653
No 310
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=22.44 E-value=1.1e+02 Score=29.16 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=23.1
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
++|++... +||+|. .+++.|.+.||+|.+++..
T Consensus 7 ~~vlItGa-------sg~iG~---~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 7 RVALVTGA-------ARGLGR---AIALRLARAGADVVVHYRS 39 (249)
T ss_pred CEEEEeCC-------CchHHH---HHHHHHHHCCCeEEEEeCC
Confidence 45665543 477775 7888899999998665543
No 311
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=22.36 E-value=3.8e+02 Score=22.36 Aligned_cols=77 Identities=12% Similarity=0.163 Sum_probs=46.9
Q ss_pred HHHHHhhhcCCCeEEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHh--cCCEEEecCCCCCccHHHHHHH
Q 008028 389 LAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIA--GADFMLVPSRFEPCGLIQLHAM 466 (580)
Q Consensus 389 ll~a~~~l~~~~v~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~--~aDi~l~ps~~E~~g~~~lEAm 466 (580)
.+.++.+. .++++++-+-+.. .+..+++..+++.. . |.. ...+++ ..|++++.+....-.-...+++
T Consensus 15 ~~~~~~~~-~~~~~v~~v~d~~---~~~~~~~~~~~~~~--~---~~~--~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l 83 (120)
T PF01408_consen 15 HLRALLRS-SPDFEVVAVCDPD---PERAEAFAEKYGIP--V---YTD--LEELLADEDVDAVIIATPPSSHAEIAKKAL 83 (120)
T ss_dssp HHHHHHHT-TTTEEEEEEECSS---HHHHHHHHHHTTSE--E---ESS--HHHHHHHTTESEEEEESSGGGHHHHHHHHH
T ss_pred HHHHHHhc-CCCcEEEEEEeCC---HHHHHHHHHHhccc--c---hhH--HHHHHHhhcCCEEEEecCCcchHHHHHHHH
Confidence 34444433 2466666333333 33455556666532 2 222 223555 7999998887777777899999
Q ss_pred HcCCceEEcC
Q 008028 467 RYGTVPIVAS 476 (580)
Q Consensus 467 a~G~PvI~s~ 476 (580)
..|+++++-.
T Consensus 84 ~~g~~v~~EK 93 (120)
T PF01408_consen 84 EAGKHVLVEK 93 (120)
T ss_dssp HTTSEEEEES
T ss_pred HcCCEEEEEc
Confidence 9999887765
No 312
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=22.35 E-value=2.1e+02 Score=30.13 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=58.8
Q ss_pred CCe-EEEEEecCChhhHHHHHHHHHHCCCCe--eEeccCChHHHHHHHhcCCEEEecCCCCCccH-HHHHHHHcCCceEE
Q 008028 399 GNV-QIVVLGTGKKPMEQQIEQLEIICPEKA--RGITKFSTPLAHKIIAGADFMLVPSRFEPCGL-IQLHAMRYGTVPIV 474 (580)
Q Consensus 399 ~~v-~lii~G~g~~~~~~~i~~l~~~~~~~v--~~~~~~~~~~~~~~~~~aDi~l~ps~~E~~g~-~~lEAma~G~PvI~ 474 (580)
.+. +++++|...+..++..+++ ...++ ......+.+.+..+++++|++|+..-.- ++. ++--|+..|++.|-
T Consensus 21 ~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~-~~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 21 GPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF-FGEPVARACIEAGVHYVD 96 (386)
T ss_dssp TCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG-GHHHHHHHHHHHT-EEEE
T ss_pred CCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc-hhHHHHHHHHHhCCCeec
Confidence 455 8899888754343333332 22222 2222335556778999999999876422 444 45556778998777
Q ss_pred cCC-----CCcceeEecCceeEEEe-ecccccccCCcccHHHHHHHHHHHHH
Q 008028 475 AST-----GGLFDTVKEGITGFQMR-SFHVECDRVDLADVAAIAKHVNRAVA 520 (580)
Q Consensus 475 s~~-----gg~~e~i~~~~~G~~~~-~~~~~~~~v~~~d~~~la~~l~~ll~ 520 (580)
+.. -.+.+...+...-++.+ ++ +|+=.+-++..+.+-+.
T Consensus 97 ~~~~~~~~~~l~~~a~~~g~~~l~~~G~-------~PGl~~~~a~~~~~~~~ 141 (386)
T PF03435_consen 97 TSYVTEEMLALDEEAKEAGVTALPGCGF-------DPGLSNLLARYAADELD 141 (386)
T ss_dssp SS-HHHHHHHCHHHHHHTTSEEE-S-BT-------TTBHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHhhCCEEEeCccc-------ccchHHHHHHHHHHHhh
Confidence 432 11112222222333322 11 78888888777776666
No 313
>PLN02306 hydroxypyruvate reductase
Probab=22.28 E-value=1.8e+02 Score=30.87 Aligned_cols=46 Identities=20% Similarity=0.200 Sum_probs=34.0
Q ss_pred HHHHHHhcCCEEEec-C-CCCCcc---HHHHHHHHcCCceEEcCCCCccee
Q 008028 438 LAHKIIAGADFMLVP-S-RFEPCG---LIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 438 ~~~~~~~~aDi~l~p-s-~~E~~g---~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
.+..+++.||++++- + .-|+.+ -..++.|--|.-+|-+..|++.|.
T Consensus 229 ~L~ell~~sDiV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe 279 (386)
T PLN02306 229 SMEEVLREADVISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDE 279 (386)
T ss_pred CHHHHHhhCCEEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccCH
Confidence 356789999998863 3 335544 458889988988888888887764
No 314
>PRK05568 flavodoxin; Provisional
Probab=22.17 E-value=1.2e+02 Score=26.81 Aligned_cols=36 Identities=14% Similarity=0.247 Sum_probs=29.0
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.-|+|.|. +|....++..+++.+.+.|++|.++-..
T Consensus 4 ~~IvY~S~-------~GnT~~~a~~i~~~~~~~g~~v~~~~~~ 39 (142)
T PRK05568 4 INIIYWSG-------TGNTEAMANLIAEGAKENGAEVKLLNVS 39 (142)
T ss_pred EEEEEECC-------CchHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 34666554 5999999999999999999999888553
No 315
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=22.11 E-value=1.1e+02 Score=27.07 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=26.5
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEE
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMS 123 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~v 123 (580)
|||+++-.. .+|-...++..+++.|.+.|++|.+
T Consensus 1 M~i~IiY~S-----~tGnTe~iA~~ia~~l~~~g~~v~~ 34 (140)
T TIGR01754 1 MRILLAYLS-----LSGNTEEVAFMIQDYLQKDGHEVDI 34 (140)
T ss_pred CeEEEEEEC-----CCChHHHHHHHHHHHHhhCCeeEEe
Confidence 566555432 3789999999999999999999873
No 316
>PRK08105 flavodoxin; Provisional
Probab=22.06 E-value=1e+02 Score=27.80 Aligned_cols=27 Identities=26% Similarity=0.193 Sum_probs=24.6
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
+|-...++..+++.|.+.|++|.++..
T Consensus 12 tGnte~~A~~l~~~l~~~g~~~~~~~~ 38 (149)
T PRK08105 12 YGNALLVAEEAEAILTAQGHEVTLFED 38 (149)
T ss_pred chHHHHHHHHHHHHHHhCCCceEEech
Confidence 799999999999999999999998765
No 317
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments. Correct positioning of the division plane is a prerequisite for the generation of daughter cells with a normal chromosome complement. In Caulobacter crescentus MipZ, an essential protein, coordinates and regulates the assembly of the FtsZ cytokinetic ring during cell division. MipZ, forms a complex with the partitioning protein ParB near the origin of replication and localizes with the duplicated origin regions to the cell poles. MipZ also directly interferes with FtsZ polymerisation, thereby restricting FtsZ ring formation to mid-cell, the region of lowest MipZ concentration. In eukaryotes members of this entry belong to the Mrp/NBP35 ATP-binding protein family, and specifically the NUBP2/CFD1 subfamily. This includes the cytosolic Fe-S cluster assembly factor Cfd1, which is a component of the cytosolic iron-sulphur (Fe/S) protein assembly machinery. This protein is required for maturation of extra-mitochondrial Fe/S proteins. It may bind and transfer a labile 4Fe-4S cluster to target apoproteins. Cfd1 is also required for biogenesis and export of both ribosomal subunits, suggesting a role in assembly of the Fe/S clusters in RLI1, a protein which performs rRNA processing and ribosome export. ; PDB: 2XIT_B 2XJ4_A 2XJ9_A.
Probab=21.93 E-value=85 Score=31.20 Aligned_cols=37 Identities=32% Similarity=0.486 Sum_probs=24.8
Q ss_pred eEEEEeecccCccccccHHH--HhccchHHHHhCCCeEEEEEecC
Q 008028 86 NLVFVGAEVAPWSKTGGLGD--VLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~--~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
+|+.|..+ .||.|. .+.+++-+|+.+|+.|-++=...
T Consensus 1 HiIvV~sg------KGGvGKSTva~~lA~aLa~~G~kVg~lD~Di 39 (261)
T PF09140_consen 1 HIIVVGSG------KGGVGKSTVAVNLAVALARMGKKVGLLDLDI 39 (261)
T ss_dssp EEEEEE-S------STTTTHHHHHHHHHHHHHCTT--EEEEE--T
T ss_pred CEEEEecC------CCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35556655 688886 56679999999999999997653
No 318
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=21.87 E-value=88 Score=30.99 Aligned_cols=37 Identities=27% Similarity=0.349 Sum_probs=26.4
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecCC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYD 129 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~ 129 (580)
|||++.... |=...-+..|.++|++.| +|+|++|..+
T Consensus 1 M~ILltNDD-------Gi~a~Gi~aL~~~l~~~g-~V~VvAP~~~ 37 (244)
T TIGR00087 1 MKILLTNDD-------GIHSPGIRALYQALKELG-EVTVVAPARQ 37 (244)
T ss_pred CeEEEECCC-------CCCCHhHHHHHHHHHhCC-CEEEEeCCCC
Confidence 788876664 222334567888999988 9999999743
No 319
>PRK09004 FMN-binding protein MioC; Provisional
Probab=21.79 E-value=1.1e+02 Score=27.62 Aligned_cols=26 Identities=23% Similarity=0.279 Sum_probs=23.6
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEE
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVA 125 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~ 125 (580)
+|-...++..+++.+.++|++|.++.
T Consensus 12 tGnae~~A~~l~~~~~~~g~~~~~~~ 37 (146)
T PRK09004 12 LGGAEYVADHLAEKLEEAGFSTETLH 37 (146)
T ss_pred chHHHHHHHHHHHHHHHcCCceEEec
Confidence 78899999999999999999998864
No 320
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=21.68 E-value=87 Score=32.01 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=25.3
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.|||+++. .|++|.+.+. .|++.|++|+++...
T Consensus 2 ~m~I~IiG--------aGaiG~~~a~---~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILG--------AGSLGSLWAC---RLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEEC--------CCHHHHHHHH---HHHhCCCCeEEEEec
Confidence 48999998 4888876544 466789999999764
No 321
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=21.63 E-value=58 Score=32.77 Aligned_cols=30 Identities=33% Similarity=0.429 Sum_probs=26.8
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEEecCC
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVAPRYD 129 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~~~y~ 129 (580)
+||.|-.-..|...|.+.||+|++++-+.+
T Consensus 4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 4 TGGTGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred eccccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 699999888999999999999999997643
No 322
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=21.63 E-value=3.9e+02 Score=22.39 Aligned_cols=73 Identities=8% Similarity=0.075 Sum_probs=43.8
Q ss_pred EEEEecCC--hhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEecCCCC-CccHHHHHHHHcCCceEEcC
Q 008028 403 IVVLGTGK--KPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRFE-PCGLIQLHAMRYGTVPIVAS 476 (580)
Q Consensus 403 lii~G~g~--~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~ps~~E-~~g~~~lEAma~G~PvI~s~ 476 (580)
++++|.|- .-+.+.+++...+.+..+.. ..............+|+++..+..- -+.-.--.+-..|+||..-+
T Consensus 4 ll~C~~GaSSs~la~km~~~a~~~gi~~~i-~a~~~~e~~~~~~~~Dvill~PQv~~~~~~i~~~~~~~~ipv~~I~ 79 (99)
T cd05565 4 LVLCAGGGTSGLLANALNKGAKERGVPLEA-AAGAYGSHYDMIPDYDLVILAPQMASYYDELKKDTDRLGIKLVTTT 79 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCcEEE-EEeeHHHHHHhccCCCEEEEcChHHHHHHHHHHHhhhcCCCEEEeC
Confidence 34555553 34677888888876644433 3445566666889999999877421 12222223445678876655
No 323
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=21.54 E-value=1e+02 Score=31.09 Aligned_cols=32 Identities=47% Similarity=0.727 Sum_probs=23.9
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
|||+++.. |.+| ..++..|++.||+|+++...
T Consensus 1 m~I~IiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILGA--------GAIG---GLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 67888773 5555 45677788899999999863
No 324
>PRK09739 hypothetical protein; Provisional
Probab=21.31 E-value=1.5e+02 Score=27.99 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=29.8
Q ss_pred CceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 84 GMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 84 ~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.|||++|... |.. .+=...++..+.+++.+.|++|.++-..
T Consensus 3 mmkiliI~~s--p~~-~s~s~~l~~~~~~~~~~~g~~v~~~dL~ 43 (199)
T PRK09739 3 SMRIYLVWAH--PRH-DSLTAKVAEAIHQRAQERGHQVEELDLY 43 (199)
T ss_pred CceEEEEEcC--CCC-CCcHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 5899999985 532 2334556667788888899999988664
No 325
>PRK07023 short chain dehydrogenase; Provisional
Probab=21.16 E-value=1.1e+02 Score=29.50 Aligned_cols=25 Identities=36% Similarity=0.512 Sum_probs=19.4
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
+||+|. .+++.|.+.|++|.+++..
T Consensus 10 sggiG~---~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 10 SRGLGA---ALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred CcchHH---HHHHHHHhCCCEEEEEecC
Confidence 477775 6788889999998887643
No 326
>PRK06179 short chain dehydrogenase; Provisional
Probab=21.07 E-value=1.2e+02 Score=29.71 Aligned_cols=33 Identities=24% Similarity=0.445 Sum_probs=23.7
Q ss_pred eEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 86 NLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 86 kI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
+.++|+.- +||+|. .+++.|+++|++|.+++..
T Consensus 5 ~~vlVtGa------sg~iG~---~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 5 KVALVTGA------SSGIGR---ATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CEEEEecC------CCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 45555543 577765 7888999999998887653
No 327
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=20.88 E-value=91 Score=33.75 Aligned_cols=34 Identities=32% Similarity=0.473 Sum_probs=26.1
Q ss_pred CCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEe
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAP 126 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~ 126 (580)
+.|||++ +||.|-+-..|++.|.++||+|+++..
T Consensus 119 ~~mkILV----------TGatGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 119 KRLRIVV----------TGGAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred CCCEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 3488665 356666667899999999999998864
No 328
>PRK05884 short chain dehydrogenase; Provisional
Probab=20.88 E-value=1.2e+02 Score=28.95 Aligned_cols=33 Identities=24% Similarity=0.509 Sum_probs=23.8
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
||+++... +||+|. .+++.|.+.|++|.++..+
T Consensus 1 m~vlItGa-------s~giG~---~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 1 VEVLVTGG-------DTDLGR---TIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred CeEEEEeC-------CchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 56554443 467765 6889999999999888654
No 329
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=20.85 E-value=81 Score=28.84 Aligned_cols=28 Identities=36% Similarity=0.431 Sum_probs=23.1
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEEec
Q 008028 100 TGGLGD--VLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 100 ~GG~g~--~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
.||.|. .+..|+.+|++.|++|.+|=..
T Consensus 8 kgG~GKTt~a~~LA~~la~~g~~vllvD~D 37 (169)
T cd02037 8 KGGVGKSTVAVNLALALAKLGYKVGLLDAD 37 (169)
T ss_pred CCcCChhHHHHHHHHHHHHcCCcEEEEeCC
Confidence 477776 6678999999999999999764
No 330
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=20.75 E-value=71 Score=30.86 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=32.1
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEecC
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRY 128 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~y 128 (580)
|..++++. +| ..|-..++.+|+++|.+.+|+|..++..|
T Consensus 1 mpLiIlTG--yP---gsGKTtfakeLak~L~~~i~~vi~l~kdy 39 (261)
T COG4088 1 MPLIILTG--YP---GSGKTTFAKELAKELRQEIWRVIHLEKDY 39 (261)
T ss_pred CceEEEec--CC---CCCchHHHHHHHHHHHHhhhhccccchhh
Confidence 55667775 45 36778899999999999999999998866
No 331
>PLN02778 3,5-epimerase/4-reductase
Probab=20.64 E-value=1e+02 Score=31.26 Aligned_cols=31 Identities=16% Similarity=0.151 Sum_probs=22.7
Q ss_pred CCceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEE
Q 008028 83 QGMNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMS 123 (580)
Q Consensus 83 ~~mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~v 123 (580)
..|||++. ||.|..-..|++.|.++||+|++
T Consensus 8 ~~~kiLVt----------G~tGfiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 8 ATLKFLIY----------GKTGWIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCeEEEE----------CCCCHHHHHHHHHHHhCCCEEEE
Confidence 45887754 45555556889999999999864
No 332
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=20.54 E-value=3.5e+02 Score=24.88 Aligned_cols=65 Identities=11% Similarity=0.095 Sum_probs=41.3
Q ss_pred cCHHHHHHHHhhhcCCCe--EEEEEecCChhhHHHHHHHHHHCCCCeeEeccCChHHHHHHHhcCCEEEec
Q 008028 384 KGSDILAQAIPKFMGGNV--QIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVP 452 (580)
Q Consensus 384 Kg~~~ll~a~~~l~~~~v--~lii~G~g~~~~~~~i~~l~~~~~~~v~~~~~~~~~~~~~~~~~aDi~l~p 452 (580)
=.+.+.++|++.+..+++ -.++-|++. +...+.++... +-++...+ ........+...||-++.-
T Consensus 89 ~Dv~laIDame~~~~~~iD~~vLvSgD~D--F~~Lv~~lre~-G~~V~v~g-~~~~ts~~L~~acd~FI~L 155 (160)
T TIGR00288 89 VDVRMAVEAMELIYNPNIDAVALVTRDAD--FLPVINKAKEN-GKETIVIG-AEPGFSTALQNSADIAIIL 155 (160)
T ss_pred ccHHHHHHHHHHhccCCCCEEEEEeccHh--HHHHHHHHHHC-CCEEEEEe-CCCCChHHHHHhcCeEEeC
Confidence 347789999988755544 444445554 67667666644 44566655 3344455689999988753
No 333
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=20.41 E-value=1.7e+02 Score=25.71 Aligned_cols=39 Identities=21% Similarity=0.135 Sum_probs=27.2
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCC-eEEEEEe
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGH-RVMSVAP 126 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~-~V~vi~~ 126 (580)
||+.++..+ +|+ .-=-...+..++++|.+.|| +|.++--
T Consensus 1 m~~~Ivvt~-ppY--g~q~a~~A~~fA~all~~gh~~v~iFly 40 (126)
T COG1553 1 MKYTIVVTG-PPY--GTESAFSALRFAEALLEQGHELVRLFLY 40 (126)
T ss_pred CeEEEEEec-CCC--ccHHHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 788888886 554 11345678899999999974 5555543
No 334
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=20.34 E-value=3.1e+02 Score=28.12 Aligned_cols=46 Identities=9% Similarity=-0.005 Sum_probs=31.5
Q ss_pred HHHHHHhcCCEEEecCC--CCCc---cHHHHHHHHcCCceEEcCCCCccee
Q 008028 438 LAHKIIAGADFMLVPSR--FEPC---GLIQLHAMRYGTVPIVASTGGLFDT 483 (580)
Q Consensus 438 ~~~~~~~~aDi~l~ps~--~E~~---g~~~lEAma~G~PvI~s~~gg~~e~ 483 (580)
.+..+++.||++++.-. -+.. +-..++.|--|..+|-...|+..+.
T Consensus 183 ~l~e~l~~aDvvv~~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~vVde 233 (312)
T PRK15469 183 ELSAFLSQTRVLINLLPNTPETVGIINQQLLEQLPDGAYLLNLARGVHVVE 233 (312)
T ss_pred cHHHHHhcCCEEEECCCCCHHHHHHhHHHHHhcCCCCcEEEECCCccccCH
Confidence 35578999999887543 2333 3347788888887777777776553
No 335
>PRK05723 flavodoxin; Provisional
Probab=20.25 E-value=1.3e+02 Score=27.39 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=28.6
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEE
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVA 125 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~ 125 (580)
|||.++-.. .+|-...++..+++.|.+.|++|.++.
T Consensus 1 ~~i~I~ygS-----~tG~ae~~A~~la~~l~~~g~~~~~~~ 36 (151)
T PRK05723 1 MKVAILSGS-----VYGTAEEVARHAESLLKAAGFEAWHNP 36 (151)
T ss_pred CeEEEEEEc-----CchHHHHHHHHHHHHHHHCCCceeecC
Confidence 566666442 278999999999999999999998753
No 336
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=20.18 E-value=1e+03 Score=24.98 Aligned_cols=104 Identities=11% Similarity=0.058 Sum_probs=62.8
Q ss_pred CcEEEEEccCccccCHHHHHHHHhhhcCCCeEEEEEecCC------------hhhHHHHHHHHHHCCCCeeEeccCChHH
Q 008028 371 IPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGK------------KPMEQQIEQLEIICPEKARGITKFSTPL 438 (580)
Q Consensus 371 ~~~i~f~Grl~~~Kg~~~ll~a~~~l~~~~v~lii~G~g~------------~~~~~~i~~l~~~~~~~v~~~~~~~~~~ 438 (580)
.+.++.+|- -.-...+.+++..+.+++..++++..|.-+ ++-.+.+.+...+++-.+ ....++...
T Consensus 100 ~~l~vIAGP-CsIEs~eq~l~~A~~lk~~g~~~~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~~-~tev~d~~~ 177 (352)
T PRK13396 100 HPVVVVAGP-CSVENEEMIVETAKRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREATGLGI-ITEVMDAAD 177 (352)
T ss_pred CeEEEEEeC-CcccCHHHHHHHHHHHHHcCCCEEEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCCcE-EEeeCCHHH
Confidence 345666663 223344566666666665566666655411 233455666666666333 334566666
Q ss_pred HHHHHhcCCEEEecCCC-CCccHHHHHHHHcCCceEEcCC
Q 008028 439 AHKIIAGADFMLVPSRF-EPCGLIQLHAMRYGTVPIVAST 477 (580)
Q Consensus 439 ~~~~~~~aDi~l~ps~~-E~~g~~~lEAma~G~PvI~s~~ 477 (580)
+..+..-+|++=++++. ..+.+ +-++...|+||+.+.-
T Consensus 178 v~~~~~~~d~lqIga~~~~n~~L-L~~va~t~kPVllk~G 216 (352)
T PRK13396 178 LEKIAEVADVIQVGARNMQNFSL-LKKVGAQDKPVLLKRG 216 (352)
T ss_pred HHHHHhhCCeEEECcccccCHHH-HHHHHccCCeEEEeCC
Confidence 66666679999999973 44444 4444467999999883
No 337
>PRK08267 short chain dehydrogenase; Provisional
Probab=20.11 E-value=1.2e+02 Score=29.58 Aligned_cols=34 Identities=26% Similarity=0.426 Sum_probs=23.9
Q ss_pred ceEEEEeecccCccccccHHHHhccchHHHHhCCCeEEEEEec
Q 008028 85 MNLVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPR 127 (580)
Q Consensus 85 mkI~~vs~e~~P~~~~GG~g~~~~~l~~aL~~~G~~V~vi~~~ 127 (580)
||.++|+.- +||+|. .+++.|.+.|++|.++...
T Consensus 1 mk~vlItGa------sg~iG~---~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 1 MKSIFITGA------ASGIGR---ATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred CcEEEEeCC------CchHHH---HHHHHHHHCCCeEEEEeCC
Confidence 555555532 466664 7888899999999988753
Done!