BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008031
(580 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 165/275 (60%), Gaps = 14/275 (5%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKG-QREFESEVSLLGKIRHPNLLALRAYY 352
I+G+ +G VYK L DG VAVKRL+E+ T+G + +F++EV ++ H NLL LR +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPET--PIDWPTRMKIIKGMTRGL--LHLHSNEN 408
+ P E+LLV+ YM +GS+A+ L R PE+ P+DWP R +I G RGL LH H +
Sbjct: 97 MTPT-ERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
IIH ++ ++N+LLD+ A + DFGL++LM +G+ APE K++
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAE-----LPQWVASIVKEEWTNEVFDLELMRDAP 523
KTDV+ GV +LEL+TG+ + A L WV ++KE+ + D++L +
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 274
Query: 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558
+E+ +++AL C SP RP++ +VV+ LE
Sbjct: 275 D--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 163/275 (59%), Gaps = 14/275 (5%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLRE-KITKGQREFESEVSLLGKIRHPNLLALRAYY 352
I+G+ +G VYK L DG+ VAVKRL+E + G+ +F++EV ++ H NLL LR +
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPET--PIDWPTRMKIIKGMTRGL--LHLHSNEN 408
+ P E+LLV+ YM +GS+A+ L R PE+ P+DWP R +I G RGL LH H +
Sbjct: 105 MTPT-ERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 162
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
IIH ++ ++N+LLD+ A + DFGL++LM +G+ APE K++
Sbjct: 163 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSE 222
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAE-----LPQWVASIVKEEWTNEVFDLELMRDAP 523
KTDV+ GV +LEL+TG+ + A L WV ++KE+ + D++L +
Sbjct: 223 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 282
Query: 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558
+E+ +++AL C SP RP++ +VV+ LE
Sbjct: 283 D--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 124/243 (51%), Gaps = 25/243 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQR--EFESEVSLLGKIRHPNLLALRA 350
E +G ++GTV++A GS VAVK L E+ +R EF EV+++ ++RHPN++
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS-NENI 409
P + V +Y+ GSL LH G +D R+ + + +G+ +LH+ N I
Sbjct: 102 AVTQPPNLSI-VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H NL S N+L+D K+ DFGLSRL + APE+ + + +N K
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTP-EWMAPEVLRDEPSNEK 219
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAEL------------------PQWVASIVKEEWTN 511
+DVYS GV + EL T + P LN A++ PQ VA+I++ WTN
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQ-VAAIIEGCWTN 278
Query: 512 EVF 514
E +
Sbjct: 279 EPW 281
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 139/274 (50%), Gaps = 17/274 (6%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
++G +G VYK L DG++VA+KR + ++G EFE+E+ L RHP+L++L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIG-FC 104
Query: 354 GPKGEKLLVFDYMPHGSLATFLHARG-PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+ E +L++ YM +G+L L+ P + W R++I G RGL +LH+ IIH
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHR 163
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRL-MXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S N+LLD++ KI+DFG+S+ LGY PE + K+D
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD 223
Query: 472 VYSLGVTILELLTGKS------PGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525
VYS GV + E+L +S P E +N AE W ++ D L A I
Sbjct: 224 VYSFGVVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPNL---ADKI 277
Query: 526 GDELLNTL-KLALHCVDPSPSARPEVLQVVQQLE 558
E L A+ C+ S RP + V+ +LE
Sbjct: 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 127/243 (52%), Gaps = 25/243 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQR--EFESEVSLLGKIRHPNLLALRA 350
E +G ++GTV++A GS VAVK L E+ +R EF EV+++ ++RHPN++
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS-NENI 409
P + V +Y+ GSL LH G +D R+ + + +G+ +LH+ N I
Sbjct: 102 AVTQPPNLSI-VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H +L S N+L+D K+ DFGLSRL + APE+ + + +N K
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTP-EWMAPEVLRDEPSNEK 219
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAEL------------------PQWVASIVKEEWTN 511
+DVYS GV + EL T + P LN A++ PQ VA+I++ WTN
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQ-VAAIIEGCWTN 278
Query: 512 EVF 514
E +
Sbjct: 279 EPW 281
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 139/274 (50%), Gaps = 17/274 (6%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
++G +G VYK L DG++VA+KR + ++G EFE+E+ L RHP+L++L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIG-FC 104
Query: 354 GPKGEKLLVFDYMPHGSLATFLHARG-PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+ E +L++ YM +G+L L+ P + W R++I G RGL +LH+ IIH
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHR 163
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRL-MXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S N+LLD++ KI+DFG+S+ LGY PE + K+D
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD 223
Query: 472 VYSLGVTILELLTGKS------PGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525
VYS GV + E+L +S P E +N AE W ++ D L A I
Sbjct: 224 VYSFGVVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPNL---ADKI 277
Query: 526 GDELLNTL-KLALHCVDPSPSARPEVLQVVQQLE 558
E L A+ C+ S RP + V+ +LE
Sbjct: 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 20/276 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKI----TKGQREFESEVSLLGKIRHPNLLALRA 350
MG+ +G VYK + + + VAVK+L + + +++F+ E+ ++ K +H NL+ L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 351 YYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ G+ L LV+ YMP+GSL L P+ W R KI +G G+ LH N +
Sbjct: 98 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKKANT 468
IH ++ S+N+LLD++ AKISDFGL+R Y APE + +
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITP 213
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL----MRDAPT 524
K+D+YS GV +LE++TG ++ PQ + I +E E + M DA +
Sbjct: 214 KSDIYSFGVVLLEIITGLP---AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS 270
Query: 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + +A C+ + RP++ +V Q L+E+
Sbjct: 271 TSVEAMYS--VASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 143/276 (51%), Gaps = 20/276 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKI----TKGQREFESEVSLLGKIRHPNLLALRA 350
MG+ +G VYK + + + VAVK+L + + +++F+ E+ ++ K +H NL+ L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 351 YYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ G+ L LV+ YMP+GSL L P+ W R KI +G G+ LH N +
Sbjct: 98 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKKANT 468
IH ++ S+N+LLD++ AKISDFGL+R Y APE + +
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITP 213
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL----MRDAPT 524
K+D+YS GV +LE++TG ++ PQ + I +E E + M DA +
Sbjct: 214 KSDIYSFGVVLLEIITGLP---AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS 270
Query: 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + +A C+ + RP++ +V Q L+E+
Sbjct: 271 TSVEAMYS--VASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 144/276 (52%), Gaps = 20/276 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKI----TKGQREFESEVSLLGKIRHPNLLALRA 350
MG+ +G VYK + + + VAVK+L + + +++F+ E+ ++ K +H NL+ L
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 351 YYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ G+ L LV+ YMP+GSL L P+ W R KI +G G+ LH N +
Sbjct: 92 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKKANT 468
IH ++ S+N+LLD++ AKISDFGL+R Y APE + +
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITP 207
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL----MRDAPT 524
K+D+YS GV +LE++TG ++ PQ + I +E E + M DA +
Sbjct: 208 KSDIYSFGVVLLEIITGLP---AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS 264
Query: 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + +A C+ + RP++ +V Q L+E+
Sbjct: 265 TSVEAMYS--VASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 296 GKSTYGTVYKATLEDGSQVAVKRLREKIT----KGQREFESEVSLLGKIRHPNLLALRAY 351
G+ +G VYK + + + VAVK+L + + +++F+ E+ + K +H NL+ L +
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 352 YLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G+ L LV+ Y P+GSL L P+ W R KI +G G+ LH N + I
Sbjct: 90 --SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH-I 146
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKKANTK 469
H ++ S+N+LLD++ AKISDFGL+R Y APE + + K
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPK 205
Query: 470 TDVYSLGVTILELLTG 485
+D+YS GV +LE++TG
Sbjct: 206 SDIYSFGVVLLEIITG 221
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 84/160 (52%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L LQ N +G+IP +L SEL + LS N +SG +PS LG LS+LR L N + G +
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTI 122
P + +L +L L+ N+L +I L NL+ ++L N+++G IP IG + L I
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 515
Query: 123 LDLSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGPVPTSL 162
L LS N SG IPA N +G +P ++
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Query: 3 LALQYNNLSGRIPASLGK--LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING 60
L L NN SG I +L + + LQE+ L +N +G +P L S L L S+N ++G
Sbjct: 370 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 429
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTL 120
++P+S +LS L L L N L+ +I L + L L L N ++G IPS + N + L
Sbjct: 430 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 489
Query: 121 TILDLSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGPVPTSLA-------LKFNASSFVG 173
+ LS N+L+GEIP N+ SG +P L L N + F G
Sbjct: 490 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 549
Query: 174 NI 175
I
Sbjct: 550 TI 551
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 95/249 (38%), Gaps = 50/249 (20%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPS---------------------- 40
L L N+ SG IPA LG L + L+ N +G +P+
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYI 575
Query: 41 ------------------------DLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLT 76
L RLS + + G +F N S++ L
Sbjct: 576 KNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 635
Query: 77 LESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPA 136
+ N L I + + L +LNL N ISG IP +G++ L ILDLS NKL G IP
Sbjct: 636 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 695
Query: 137 XXXXXXXXXXXXXXYNNLSGPVPTSLALK-FNASSFVGNIQLCGYSGSTPCPSPP---AE 192
NNLSGP+P + F + F+ N LCGY PS A
Sbjct: 696 AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAH 755
Query: 193 KPKSRGRKL 201
+S GR+L
Sbjct: 756 HQRSHGRRL 764
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING 60
MFL + YN LSG IP +G + L ++L HN ISG +P ++G L L ILD S N ++G
Sbjct: 632 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 691
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQI 86
+P + S L+ L + L +NNL I
Sbjct: 692 RIPQAMSALTMLTEIDLSNNNLSGPI 717
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDL-GRLSRLRILDFSYNAING 60
L + N G IP L LQ +SL+ NK +G +P L G L LD S N G
Sbjct: 248 LLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 305
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQI-LDSLDKLHNLSVLNLKRNQISGHIPSTIGNIS- 118
++P F + S L SL L SNN ++ +D+L K+ L VL+L N+ SG +P ++ N+S
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 119 TLTILDLSQNKLSGEI 134
+L LDLS N SG I
Sbjct: 366 SLLTLDLSSNNFSGPI 381
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 23 ELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82
EL+ +++S NKISG + D+ R L LD S N + +P + S+L L + N L
Sbjct: 176 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 232
Query: 83 DDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135
++ L +LN+ NQ G IP + +L L L++NK +GEIP
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIP 283
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 3 LALQYNNLSGRIPA--SLGKLSELQEISLSHN------KISGVMPSDLGRLSRLRILDFS 54
L L N+LSG + SLG S L+ +++S N K+SG + +L+ L +LD S
Sbjct: 102 LDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-----KLNSLEVLDLS 156
Query: 55 YNAINGSLPASF---SNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIP 111
N+I+G+ + L L + N + + + + NL L++ N S IP
Sbjct: 157 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP 214
Query: 112 STIGNISTLTILDLSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGPVP 159
+G+ S L LD+S NKLSG+ N GP+P
Sbjct: 215 -FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 58 INGSLPASFSNLSSLVSLTLESNNLDDQI--LDSLDKLHNLSVLNLKRNQISGHIPSTIG 115
INGS+ + F +SL SL L N+L + L SL L LN+ N + P +
Sbjct: 86 INGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVS 142
Query: 116 N---ISTLTILDLSQNKLSG 132
+++L +LDLS N +SG
Sbjct: 143 GGLKLNSLEVLDLSANSISG 162
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 84/160 (52%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L LQ N +G+IP +L SEL + LS N +SG +PS LG LS+LR L N + G +
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTI 122
P + +L +L L+ N+L +I L NL+ ++L N+++G IP IG + L I
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 123 LDLSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGPVPTSL 162
L LS N SG IPA N +G +P ++
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Query: 3 LALQYNNLSGRIPASLGK--LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING 60
L L NN SG I +L + + LQE+ L +N +G +P L S L L S+N ++G
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTL 120
++P+S +LS L L L N L+ +I L + L L L N ++G IPS + N + L
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 492
Query: 121 TILDLSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGPVPTSLA-------LKFNASSFVG 173
+ LS N+L+GEIP N+ SG +P L L N + F G
Sbjct: 493 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552
Query: 174 NI 175
I
Sbjct: 553 TI 554
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 86/225 (38%), Gaps = 47/225 (20%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPS---------------------- 40
L L N+ SG IPA LG L + L+ N +G +P+
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYI 578
Query: 41 ------------------------DLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLT 76
L RLS + + G +F N S++ L
Sbjct: 579 KNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638
Query: 77 LESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPA 136
+ N L I + + L +LNL N ISG IP +G++ L ILDLS NKL G IP
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 698
Query: 137 XXXXXXXXXXXXXXYNNLSGPVPTSLALK-FNASSFVGNIQLCGY 180
NNLSGP+P + F + F+ N LCGY
Sbjct: 699 AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING 60
MFL + YN LSG IP +G + L ++L HN ISG +P ++G L L ILD S N ++G
Sbjct: 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 694
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQI 86
+P + S L+ L + L +NNL I
Sbjct: 695 RIPQAMSALTMLTEIDLSNNNLSGPI 720
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDL-GRLSRLRILDFSYNAING 60
L + N G IP L LQ +SL+ NK +G +P L G L LD S N G
Sbjct: 251 LLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQI-LDSLDKLHNLSVLNLKRNQISGHIPSTIGNIS- 118
++P F + S L SL L SNN ++ +D+L K+ L VL+L N+ SG +P ++ N+S
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 119 TLTILDLSQNKLSGEI 134
+L LDLS N SG I
Sbjct: 369 SLLTLDLSSNNFSGPI 384
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 23 ELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82
EL+ +++S NKISG + D+ R L LD S N + +P + S+L L + N L
Sbjct: 179 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 235
Query: 83 DDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135
++ L +LN+ NQ G IP + +L L L++NK +GEIP
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIP 286
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 3 LALQYNNLSGRIPA--SLGKLSELQEISLSHN------KISGVMPSDLGRLSRLRILDFS 54
L L N+LSG + SLG S L+ +++S N K+SG + +L+ L +LD S
Sbjct: 105 LDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-----KLNSLEVLDLS 159
Query: 55 YNAINGSLPASF---SNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIP 111
N+I+G+ + L L + N + + + + NL L++ N S IP
Sbjct: 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP 217
Query: 112 STIGNISTLTILDLSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGPVP 159
+G+ S L LD+S NKLSG+ N GP+P
Sbjct: 218 -FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 58 INGSLPASFSNLSSLVSLTLESNNLDDQI--LDSLDKLHNLSVLNLKRNQISGHIPSTIG 115
INGS+ + F +SL SL L N+L + L SL L LN+ N + P +
Sbjct: 89 INGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVS 145
Query: 116 N---ISTLTILDLSQNKLSG 132
+++L +LDLS N +SG
Sbjct: 146 GGLKLNSLEVLDLSANSISG 165
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 29/282 (10%)
Query: 289 CATAE-IMGKSTYGTVYKATLEDGSQ-----VAVKRLREKITKGQR-EFESEVSLLGKIR 341
C T + ++G +G VYK L+ S VA+K L+ T+ QR +F E ++G+
Sbjct: 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLL 401
H N++ L + +++ +YM +G+L FL + E + + +++G+ G+
Sbjct: 105 HHNIIRLEGV-ISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMK 161
Query: 402 HLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APE 459
+L +N N +H +L + N+L++ + K+SDFGLSR++ + R APE
Sbjct: 162 YL-ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 460 LSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518
+K + +DV+S G+ + E++T G+ P L+ E+ + + N+ F L
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI---------NDGFRLPT 271
Query: 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
D P+ +L + C + RP+ +V L+++
Sbjct: 272 PMDCPS------AIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Query: 8 NNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFS 67
NNL G IP ++ KL++L + ++H +SG +P L ++ L LDFSYNA++G+LP S S
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 68 NLSSLVSLTLESNNLDDQILDSLDKLHNL-SVLNLKRNQISGHIPSTIGNISTLTILDLS 126
+L +LV +T + N + I DS L + + + RN+++G IP T N++ L +DLS
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLS 205
Query: 127 QNKLSGE 133
+N L G+
Sbjct: 206 RNMLEGD 212
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+L + + N+SG IP L ++ L + S+N +SG +P + L L + F N I+G+
Sbjct: 105 YLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGA 164
Query: 62 LPASFSNLSSL-VSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISG------------ 108
+P S+ + S L S+T+ N L +I + L NL+ ++L RN + G
Sbjct: 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 109 ---HIPST--------IGNISTLTILDLSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGP 157
H+ +G L LDL N++ G +P +NNL G
Sbjct: 224 QKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 158 VPTSLAL-KFNASSFVGNIQLCG 179
+P L +F+ S++ N LCG
Sbjct: 284 IPQGGNLQRFDVSAYANNKCLCG 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 38 MPSDLGRLSRLRILDFS-YNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNL 96
+PS L L L L N + G +P + + L+ L L + N+ I D L ++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 97 SVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP-AXXXXXXXXXXXXXXYNNLS 155
L+ N +SG +P +I ++ L + N++SG IP + N L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 156 GPVPTSLA 163
G +P + A
Sbjct: 188 GKIPPTFA 195
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 23/268 (8%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ + +VA+K +RE + +F E ++ K+ HP L+ L L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL- 70
Query: 355 PKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
+ LVF++M HG L+ +L RG T + + + G+ +L +IH +
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLE-EACVIHRD 126
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L+ ++ K+SDFG++R + + + +PE+ + ++K+DV+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
S GV + E+ + GK P E + +E+ + +++ F L R A T +++N
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSEVVEDIST---------GFRLYKPRLASTHVYQIMN- 236
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
HC P RP ++++QL EI
Sbjct: 237 -----HCWKERPEDRPAFSRLLRQLAEI 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 23/268 (8%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ + +VA+K +RE + +F E ++ K+ HP L+ L L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL- 75
Query: 355 PKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
+ LVF++M HG L+ +L RG T + + + G+ +L +IH +
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLE-EACVIHRD 131
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L+ ++ K+SDFG++R + + + +PE+ + ++K+DV+
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
S GV + E+ + GK P E + +E+ + +++ F L R A T +++N
Sbjct: 192 SFGVLMWEVFSEGKIPYENRSNSEVVEDIST---------GFRLYKPRLASTHVYQIMN- 241
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
HC P RP ++++QL EI
Sbjct: 242 -----HCWRERPEDRPAFSRLLRQLAEI 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 21/267 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ + +VA+K +RE + +F E ++ K+ HP L+ L L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL- 72
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ LVF++M HG L+ +L R T + + + G+ +L +IH +L
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDL 129
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
+ N L+ ++ K+SDFG++R + + + +PE+ + ++K+DV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 475 LGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTL 533
GV + E+ + GK P E + +E+ + +++ F L R A T +++N
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVEDIST---------GFRLYKPRLASTHVYQIMN-- 238
Query: 534 KLALHCVDPSPSARPEVLQVVQQLEEI 560
HC P RP ++++QL EI
Sbjct: 239 ----HCWKERPEDRPAFSRLLRQLAEI 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLAL 348
+G+ +G V+ A +D VAVK L++ +++F E LL ++H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV-- 78
Query: 349 RAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPE----------TPIDWPTRMKIIKGMT 397
+ Y + +G+ L +VF+YM HG L FL A GP+ T + + I + +
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYR 456
G+++L ++++ +H +L + N L+ ++ KI DFG+SR + + +
Sbjct: 139 AGMVYL-ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 457 APELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
PE +K T++DV+SLGV + E+ T GK P L+ E+
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 21/267 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ + +VA+K +RE + +F E ++ K+ HP L+ L L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL- 72
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ LVF++M HG L+ +L R T + + + G+ +L ++IH +L
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE-EASVIHRDL 129
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
+ N L+ ++ K+SDFG++R + + + +PE+ + ++K+DV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 475 LGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTL 533
GV + E+ + GK P E + +E+ + +++ F L R A T +++N
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVEDIST---------GFRLYKPRLASTHVYQIMN-- 238
Query: 534 KLALHCVDPSPSARPEVLQVVQQLEEI 560
HC P RP ++++QL I
Sbjct: 239 ----HCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLR----EKITKGQREFESEVSLLGKIRHPNLLAL 348
EI+G +G VY+A G +VAVK R E I++ E L ++HPN++AL
Sbjct: 13 EIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSN 406
R L + LV ++ G L L + P+ ++W ++ RG+ +LH
Sbjct: 72 RGVCL-KEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDE 124
Query: 407 E--NIIHGNLTSSNVLL------DDSTNA--KISDFGLSRLMXXXXXXXXXXXXXXLGYR 456
IIH +L SSN+L+ D +N KI+DFGL+R +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYAWM 181
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL 516
APE+ + + +DV+S GV + ELLTG+ P ++G + VA N
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA-------MN----- 229
Query: 517 ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+L P+ E KL C +P P +RP ++ QL I
Sbjct: 230 KLALPIPSTCPEPFA--KLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 21/267 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ + +VA+K ++E + + +F E ++ K+ HP L+ L L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLVQLYGVCL- 92
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ LVF++M HG L+ +L R T + + + G+ +L +IH +L
Sbjct: 93 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYL-EEACVIHRDL 149
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
+ N L+ ++ K+SDFG++R + + + +PE+ + ++K+DV+S
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 475 LGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTL 533
GV + E+ + GK P E + +E+ + +++ F L R A T +++N
Sbjct: 210 FGVLMWEVFSEGKIPYENRSNSEVVEDIST---------GFRLYKPRLASTHVYQIMN-- 258
Query: 534 KLALHCVDPSPSARPEVLQVVQQLEEI 560
HC P RP ++++QL EI
Sbjct: 259 ----HCWKERPEDRPAFSRLLRQLAEI 281
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 29/272 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
+ +GK +G V G++VAVK ++ T + F +E S++ ++RH NL+ L
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+ KG +V +YM GSL +L +RG + + +K + + +L N N +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHR 313
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
+L + NVL+ + AK+SDFGL++ + + APE + KK +TK+DV
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 473 YSLGVTILELLT-GKSPGE--PLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
+S G+ + E+ + G+ P PL V V++ + + D P + D +
Sbjct: 370 WSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEKGYKMDAPD----GCPPAVYDVM 419
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
N C + RP LQ+ +QLE IR
Sbjct: 420 KN-------CWHLDAATRPTFLQLREQLEHIR 444
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 35/280 (12%)
Query: 294 IMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR--EFESEVSLLGKIRHPNLLA 347
++GK +G VY D +Q A+K L +IT+ Q+ F E L+ + HPN+LA
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTRGLLHLH 404
L L P+G ++ YM HG L F+ R P+ PT +I + RG+ +L
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRN---PTVKDLISFGLQVARGMEYL- 140
Query: 405 SNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKL 463
+ + +H +L + N +LD+S K++DFGL+R ++ L + L L
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 464 K--KANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520
+ + TK+DV+S GV + ELLT G P ++ +L ++A + +
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR------------LP 248
Query: 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
D L ++ C + P+ RP +V ++E+I
Sbjct: 249 QPEYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQI 285
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 31 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFL--HARGPETPIDWPTRMKIIKGMTRG 399
HPN+L+L L +G L+V YM HG L F+ P +++ KGM
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK-- 148
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGYR 456
+++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 149 ---FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 31 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFL--HARGPETPIDWPTRMKIIKGMTRG 399
HPN+L+L L +G L+V YM HG L F+ P +++ KGM
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK-- 148
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGYR 456
+++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 149 ---FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 28 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFL--HARGPETPIDWPTRMKIIKGMTRG 399
HPN+L+L L +G L+V YM HG L F+ P +++ KGM
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK-- 145
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGYR 456
+++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 146 ---FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 148
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFL--HARGPETPIDWPTRMKIIKGMTRG 399
HPN+L+L L +G L+V YM HG L F+ P +++ KGM
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK-- 206
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGYR 456
+++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 207 ---FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 30 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLH--ARGPETPIDWPTRMKIIKGMTRG 399
HPN+L+L L +G L+V YM HG L F+ P +++ KGM
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK-- 147
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGYR 456
+++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 148 ---FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 35 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 94
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFL--HARGPETPIDWPTRMKIIKGMTRG 399
HPN+L+L L +G L+V YM HG L F+ P +++ KGM
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK-- 152
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGYR 456
+++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 153 ---FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 49 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 108
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 163
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 164 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 30 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 144
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 145 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 29 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 143
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 144 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 20 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LHA ET + + I + RG+ +LH+ ++IIH
Sbjct: 78 TKP--QLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHA-KSIIHR 132
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL+ + + + APE+ +++ +N
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNIN 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 29/272 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
+ +GK +G V G++VAVK ++ T + F +E S++ ++RH NL+ L
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+ KG +V +YM GSL +L +RG + + +K + + +L N N +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHR 141
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
+L + NVL+ + AK+SDFGL++ + + APE + KK +TK+DV
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 473 YSLGVTILELLT-GKSPGE--PLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
+S G+ + E+ + G+ P PL +P+ + + ++ P E+
Sbjct: 198 WSFGILLWEIYSFGRVPYPRIPLKDV-VPR----------VEKGYKMDAPDGCPPAVYEV 246
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
+ +C + RP LQ+ +QLE I+
Sbjct: 247 MK------NCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 29/272 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
+ +GK +G V G++VAVK ++ T + F +E S++ ++RH NL+ L
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+ KG +V +YM GSL +L +RG + + +K + + +L N N +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHR 126
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
+L + NVL+ + AK+SDFGL++ + + APE + KK +TK+DV
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 473 YSLGVTILELLT-GKSPGE--PLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
+S G+ + E+ + G+ P PL +P+ + + ++ P E+
Sbjct: 183 WSFGILLWEIYSFGRVPYPRIPLKDV-VPR----------VEKGYKMDAPDGCPPAVYEV 231
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
+ +C + RP LQ+ +QLE I+
Sbjct: 232 MK------NCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 30 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFL--HARGPETPIDWPTRMKIIKGMTRG 399
HPN+L+L L +G L+V YM HG L F+ P +++ KGM
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK-- 147
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGYR 456
+++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 148 ---FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 48 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 107
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 162
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 163 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 28 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 142
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 143 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 283 TADDLLCATAEI-----MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVS 335
ADD +I +G ++GTVYK VAVK L Q + F++EV
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 336 LLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG 395
+L K RH N+L Y P + +V + SL LHA ET + + I +
Sbjct: 73 VLRKTRHVNILLFMGYSTAP--QLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQ 128
Query: 396 MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL-SRLMXXXXXXXXXXXXXXLG 454
RG+ +LH+ ++IIH +L S+N+ L + KI DFGL + +
Sbjct: 129 TARGMDYLHA-KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 455 YRAPELSKLKKAN---TKTDVYSLGVTILELLTGKSPGEPLN 493
+ APE+ +++ +N ++DVY+ G+ + EL+TG+ P +N
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 137/283 (48%), Gaps = 32/283 (11%)
Query: 289 CATAE-IMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRH 342
C T E ++G +G V L+ + VA+K L+ T+ QR +F E S++G+ H
Sbjct: 23 CITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 82
Query: 343 PNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLL 401
PN++ L K ++V +YM +GSL TFL G T I + +++G++ G+
Sbjct: 83 PNIIHLEGVVTKSK-PVMIVTEYMENGSLDTFLKKNDGQFTVIQ---LVGMLRGISAGMK 138
Query: 402 HLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APE 459
+L S+ +H +L + N+L++ + K+SDFGLSR++ + R APE
Sbjct: 139 YL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE--VFDLE 517
+K + +DV+S G+ + E+++ E P W E TN+ + +E
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVS---------YGERPYW-------EMTNQDVIKAVE 241
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P+ D +L L C ++RP+ ++V L+++
Sbjct: 242 EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 30 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 144
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 145 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 22 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 81
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 136
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 137 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 29 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 143
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 144 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 27 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 86
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 141
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 142 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 287 LLCATAEIMGKSTYGTVYKATL--EDGSQV--AVKRLREKITKGQ-REFESEVSLLGKIR 341
L+ E++G+ +G VY TL DG ++ AVK L G+ +F +E ++
Sbjct: 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 84
Query: 342 HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK---GMTR 398
HPN+L+L L +G L+V YM HG L F+ PT +I + +
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAK 139
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX---LGY 455
G+ +L +++ +H +L + N +LD+ K++DFGL+R M + +
Sbjct: 140 GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
A E + +K TK+DV+S GV + EL+T +P P
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 23/268 (8%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ + +VA+K +RE + +F E ++ K+ HP L+ L L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL- 73
Query: 355 PKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
+ LV ++M HG L+ +L RG T + + + G+ +L +IH +
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLE-EACVIHRD 129
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L+ ++ K+SDFG++R + + + +PE+ + ++K+DV+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
S GV + E+ + GK P E + +E+ + +++ F L R A T +++N
Sbjct: 190 SFGVLMWEVFSEGKIPYENRSNSEVVEDIST---------GFRLYKPRLASTHVYQIMN- 239
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
HC P RP ++++QL EI
Sbjct: 240 -----HCWRERPEDRPAFSRLLRQLAEI 262
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 292 AEIMGKSTYGTVYKAT-LEDGSQV----AVKRLREKI-TKGQREFESEVSLLGKIRHPNL 345
+++G +GTVYK + +G V A+K L E K EF E ++ + HP+L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLL 401
+ L L P + LV MPHG L ++H G + ++W ++ +G++
Sbjct: 80 VRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMM 131
Query: 402 HLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPEL 460
+L ++H +L + NVL+ + KI+DFGL+RL+ + + A E
Sbjct: 132 YLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 461 SKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELP 498
+K ++DV+S GVTI EL+T G P + + E+P
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP 229
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LHA ET + + I + RG+ +LH+ ++IIH
Sbjct: 90 TKP--QLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHA-KSIIHR 144
Query: 413 NLTSSNVLLDDSTNAKISDFGL-SRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL + + + APE+ +++ +N
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 99 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 154
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 215 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 263
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 264 PA------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 292 AEIMGKSTYGTVYKAT-LEDGSQV----AVKRLREKI-TKGQREFESEVSLLGKIRHPNL 345
+++G +GTVYK + +G V A+K L E K EF E ++ + HP+L
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLL 401
+ L L P + LV MPHG L ++H G + ++W ++ +G++
Sbjct: 103 VRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMM 154
Query: 402 HLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPEL 460
+L ++H +L + NVL+ + KI+DFGL+RL+ + + A E
Sbjct: 155 YL-EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 461 SKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELP 498
+K ++DV+S GVTI EL+T G P + + E+P
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP 252
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 130/296 (43%), Gaps = 35/296 (11%)
Query: 281 MFTADDLLCATAEIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGK 339
+F DL+ E++GK +G K T E G + +K L + QR F EV ++
Sbjct: 6 IFRPSDLI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 340 IRHPNLLALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTR 398
+ HPN+L K ++L + +Y+ G+L + + + P W R+ K +
Sbjct: 64 LEHPNVLKFIGVLY--KDKRLNFITEYIKGGTLRGIIKSMDSQYP--WSQRVSFAKDIAS 119
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXX----------XXXX 448
G+ +LHS NIIH +L S N L+ ++ N ++DFGL+RLM
Sbjct: 120 GMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 449 XXXXLG---YRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIV 505
+G + APE+ + + K DV+S G+ + E++ G+ +P LP+ + +
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADP---DYLPRTMDFGL 234
Query: 506 KEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
D + P + + + C D P RP +++ LE +R
Sbjct: 235 N---VRGFLDRYCPPNCPP------SFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 82 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 137
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 198 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 246
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 247 PA------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 23/261 (8%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ T ++VA+K L+ T F E ++ K++H L+ L Y +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL G + P + + + G+ ++ N IH +L
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDL 131
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
S+N+L+ + KI+DFGL+RL+ + + APE + + K+DV+S
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 475 LGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTL 533
G+ + EL+T G+ P +N E+ + V + + +D P EL+
Sbjct: 192 FGILLTELVTKGRVPYPGMNNREVLEQV---------ERGYRMPCPQDCPISLHELM--- 239
Query: 534 KLALHCVDPSPSARP--EVLQ 552
+HC P RP E LQ
Sbjct: 240 ---IHCWKKDPEERPTFEYLQ 257
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 109 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 164
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 225 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 273
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 274 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 20/208 (9%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+I+G G V L Q VA+K L+ T+ QR +F SE S++G+ HPN++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL---LHL 403
L + +G ++V +YM +GSL TFL + I M+++ GM RG+ +
Sbjct: 115 LEG--VVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI-----MQLV-GMLRGVGAGMRY 166
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELS 461
S+ +H +L + NVL+D + K+SDFGLSR++ + R APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSP 488
+ ++ +DV+S GV + E+L G+ P
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 139/289 (48%), Gaps = 36/289 (12%)
Query: 286 DLLCATAE-IMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGK 339
D+ C E ++G +G V L+ + VA+K L+ T+ QR +F SE S++G+
Sbjct: 31 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 90
Query: 340 IRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTR 398
HPN++ L + +++ ++M +GSL +FL G T I + +++G+
Sbjct: 91 FDHPNVIHLEGV-VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ---LVGMLRGIAA 146
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXX----XXLG 454
G+ +L ++ N +H +L + N+L++ + K+SDFGLSR + +
Sbjct: 147 GMKYL-ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 205
Query: 455 YRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV- 513
+ APE + +K + +DV+S G+ + E+++ E P W + ++ N +
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS---------YGERPYW--DMTNQDVINAIE 254
Query: 514 --FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+ L D P+ +L+ L C + RP+ Q+V L+++
Sbjct: 255 QDYRLPPPMDCPSALHQLM------LDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 20/208 (9%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+I+G G V L Q VA+K L+ T+ QR +F SE S++G+ HPN++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL---LHL 403
L + +G ++V +YM +GSL TFL + I M+++ GM RG+ +
Sbjct: 115 LEG--VVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI-----MQLV-GMLRGVGAGMRY 166
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELS 461
S+ +H +L + NVL+D + K+SDFGLSR++ + R APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSP 488
+ ++ +DV+S GV + E+L G+ P
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 286 DLLCATAE-IMGKSTYGTVYKATLEDGSQ----VAVKRLREKIT-KGQREFESEVSLLGK 339
D C E ++G +G V L+ + VA+K L+ T K +R+F SE S++G+
Sbjct: 27 DASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ 86
Query: 340 IRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK--GMT 397
HPN++ L K +++ +YM +GSL FL R +I+ GM
Sbjct: 87 FDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGML 137
Query: 398 RGL---LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG 454
RG+ + S+ + +H +L + N+L++ + K+SDFG+SR++ +
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 455 YR--APELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEW 509
R APE +K + +DV+S G+ + E+++ E P W S ++K
Sbjct: 198 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS---------YGERPYWDMSNQDVIKA-- 246
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + L D P + +L L C S RP+ Q+V L+++
Sbjct: 247 IEEGYRLPPPMDCP------IALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 286 DLLCATAE-IMGKSTYGTVYKATLEDGSQ----VAVKRLREKIT-KGQREFESEVSLLGK 339
D C E ++G +G V L+ + VA+K L+ T K +R+F SE S++G+
Sbjct: 6 DASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ 65
Query: 340 IRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK--GMT 397
HPN++ L K +++ +YM +GSL FL R +I+ GM
Sbjct: 66 FDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGML 116
Query: 398 RGL---LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG 454
RG+ + S+ + +H +L + N+L++ + K+SDFG+SR++ +
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 455 YR--APELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEW 509
R APE +K + +DV+S G+ + E+++ E P W S ++K
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS---------YGERPYWDMSNQDVIKA-- 225
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + L D P + +L L C S RP+ Q+V L+++
Sbjct: 226 IEEGYRLPPPMDCP------IALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 286 DLLCATAE-IMGKSTYGTVYKATLEDGSQ----VAVKRLREKIT-KGQREFESEVSLLGK 339
D C E ++G +G V L+ + VA+K L+ T K +R+F SE S++G+
Sbjct: 12 DASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ 71
Query: 340 IRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK--GMT 397
HPN++ L K +++ +YM +GSL FL R +I+ GM
Sbjct: 72 FDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGML 122
Query: 398 RGL---LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG 454
RG+ + S+ + +H +L + N+L++ + K+SDFG+SR++ +
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 455 YR--APELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEW 509
R APE +K + +DV+S G+ + E+++ E P W S ++K
Sbjct: 183 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS---------YGERPYWDMSNQDVIKA-- 231
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + L D P + +L L C S RP+ Q+V L+++
Sbjct: 232 IEEGYRLPPPMDCP------IALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 35/281 (12%)
Query: 293 EIMGKSTYGTVYKATLE----DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
E++G +G V + L+ S VA+K L+ T+ QR EF SE S++G+ HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L +L ++M +G+L +FL G T I + +++G+ G+ +L +
Sbjct: 82 LEGVVTNSMPVMILT-EFMENGALDSFLRLNDGQFTVIQ---LVGMLRGIASGMRYL-AE 136
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXX----XXLGYRAPELSK 462
+ +H +L + N+L++ + K+SDFGLSR + + + APE
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 463 LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV---FDLELM 519
+K + +D +S G+ + E+++ E P W S ++ N + + L
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMS---------FGERPYWDMS--NQDVINAIEQDYRLPPP 245
Query: 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
D PT + +L L C +ARP QVV L+++
Sbjct: 246 PDCPT------SLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 35/281 (12%)
Query: 293 EIMGKSTYGTVYKATLE----DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
E++G +G V + L+ S VA+K L+ T+ QR EF SE S++G+ HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L +L ++M +G+L +FL G T I + +++G+ G+ +L +
Sbjct: 80 LEGVVTNSMPVMILT-EFMENGALDSFLRLNDGQFTVIQ---LVGMLRGIASGMRYL-AE 134
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXX----XXLGYRAPELSK 462
+ +H +L + N+L++ + K+SDFGLSR + + + APE
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 463 LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV---FDLELM 519
+K + +D +S G+ + E+++ E P W S ++ N + + L
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMS---------FGERPYWDMS--NQDVINAIEQDYRLPPP 243
Query: 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
D PT + +L L C +ARP QVV L+++
Sbjct: 244 PDCPT------SLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGL+R++ + R +PE +K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 36/289 (12%)
Query: 286 DLLCATAE-IMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGK 339
D+ C E ++G +G V L+ + VA+K L+ T+ QR +F SE S++G+
Sbjct: 5 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 64
Query: 340 IRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTR 398
HPN++ L + +++ ++M +GSL +FL G T I + +++G+
Sbjct: 65 FDHPNVIHLEGV-VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ---LVGMLRGIAA 120
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX----LG 454
G+ +L ++ N +H L + N+L++ + K+SDFGLSR + +
Sbjct: 121 GMKYL-ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 179
Query: 455 YRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV- 513
+ APE + +K + +DV+S G+ + E+++ E P W + ++ N +
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS---------YGERPYW--DMTNQDVINAIE 228
Query: 514 --FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+ L D P+ +L+ L C + RP+ Q+V L+++
Sbjct: 229 QDYRLPPPMDCPSALHQLM------LDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 24/223 (10%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLAL 348
+G+ +G V+ A +D VAVK L+E +++F+ E LL ++H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV-- 83
Query: 349 RAYYLGPKGEKLL-VFDYMPHGSLATFLHARGPET------------PIDWPTRMKIIKG 395
R + + +G LL VF+YM HG L FL + GP+ P+ + +
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 396 MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLG 454
+ G+++L + + +H +L + N L+ KI DFG+SR + +
Sbjct: 144 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 455 YRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAE 496
+ PE +K T++DV+S GV + E+ T GK P L+ E
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 245
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 25/225 (11%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLAL 348
+G+ +G V+ A +D VAVK L++ +++F+ E LL ++H +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV-- 80
Query: 349 RAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPI--DWPTR-----------MKIIK 394
+ Y + G+ L +VF+YM HG L FL A GP+ I D R + I
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ G+++L ++++ +H +L + N L+ + KI DFG+SR + +
Sbjct: 141 QIASGMVYL-ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ PE +K T++DV+S GV + E+ T GK P L+ E+
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 321
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 379
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H NL + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 440 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 490
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 491 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 518
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 24/223 (10%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLAL 348
+G+ +G V+ A +D VAVK L+E +++F+ E LL ++H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV-- 77
Query: 349 RAYYLGPKGEKLL-VFDYMPHGSLATFLHARGPET------------PIDWPTRMKIIKG 395
R + + +G LL VF+YM HG L FL + GP+ P+ + +
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 396 MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLG 454
+ G+++L + + +H +L + N L+ KI DFG+SR + +
Sbjct: 138 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 455 YRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAE 496
+ PE +K T++DV+S GV + E+ T GK P L+ E
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 239
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 279
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 337
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H NL + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 398 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 448
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 449 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 476
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V +YM +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGL R++ + R +PE +K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + KL++ +Y+P+GSL +L A ID ++ + +G+ +L +
Sbjct: 81 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL-GTK 136
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 24/223 (10%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLAL 348
+G+ +G V+ A +D VAVK L+E +++F+ E LL ++H +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV-- 106
Query: 349 RAYYLGPKGEKLL-VFDYMPHGSLATFLHARGPET------------PIDWPTRMKIIKG 395
R + + +G LL VF+YM HG L FL + GP+ P+ + +
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 396 MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLG 454
+ G+++L + + +H +L + N L+ KI DFG+SR + +
Sbjct: 167 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 455 YRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAE 496
+ PE +K T++DV+S GV + E+ T GK P L+ E
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 268
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 284 ADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHP 343
A +++ +T +G ++GTVYK V + ++ + + + F +EV++L K RH
Sbjct: 35 ASEVMLSTR--IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHV 92
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N+L Y K +V + SL LH + ET + I + +G+ +L
Sbjct: 93 NILLFMGYM--TKDNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYL 148
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX-XXXLGYRAPELSK 462
H+ +NIIH ++ S+N+ L + KI DFGL+ + + + APE+ +
Sbjct: 149 HA-KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 463 LKKAN---TKTDVYSLGVTILELLTGKSPGEPLN 493
++ N ++DVYS G+ + EL+TG+ P +N
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 282
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 340
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H NL + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 401 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 451
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 452 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 479
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 80
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 138
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 249
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 250 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + KL++ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 79 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 134
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH NL + N+L+++ KI DFGL++++ + + APE K
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 195 FSVASDVWSFGVVLYELFTYIEKSKSP 221
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 29/272 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
+ +GK +G V G++VAVK ++ T + F +E S++ ++RH NL+ L
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+ KG +V +YM GSL +L +RG + + +K + + +L N N +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHR 132
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
+L + NVL+ + AK+SDFGL++ + + APE + +TK+DV
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 473 YSLGVTILELLT-GKSPGE--PLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
+S G+ + E+ + G+ P PL +P+ + + ++ P E+
Sbjct: 189 WSFGILLWEIYSFGRVPYPRIPLKDV-VPR----------VEKGYKMDAPDGCPPAVYEV 237
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
+ +C + RP LQ+ +QLE I+
Sbjct: 238 MK------NCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 46/271 (16%)
Query: 294 IMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
++GK TYG VY L + ++A+K + E+ ++ + E++L ++H N++ Y
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ----Y 84
Query: 353 LGPKGEKLLVFDYM---PHGSLATFLHAR-GP----ETPIDWPTRMKIIKGMTRGLLHLH 404
LG E + +M P GSL+ L ++ GP E I + T K + GL +LH
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT-----KQILEGLKYLH 139
Query: 405 SNENIIHGNLTSSNVLLDDSTNA-KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-SK 462
N+ I+H ++ NVL++ + KISDFG S+ + L Y APE+ K
Sbjct: 140 DNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGT-LQYMAPEIIDK 197
Query: 463 LKKANTKT-DVYSLGVTILELLTGKSP----GEPLNGAELPQWVASIVKEEWTNEVFDLE 517
+ K D++SLG TI+E+ TGK P GEP +F +
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------------------QAAMFKVG 239
Query: 518 LMRDAPTIGDELLNTLK-LALHCVDPSPSAR 547
+ + P I + + K L C +P P R
Sbjct: 240 MFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 46/271 (16%)
Query: 294 IMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
++GK TYG VY L + ++A+K + E+ ++ + E++L ++H N++ Y
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ----Y 70
Query: 353 LGPKGEKLLVFDYM---PHGSLATFLHAR-GP----ETPIDWPTRMKIIKGMTRGLLHLH 404
LG E + +M P GSL+ L ++ GP E I + T K + GL +LH
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT-----KQILEGLKYLH 125
Query: 405 SNENIIHGNLTSSNVLLDDSTNA-KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-SK 462
N+ I+H ++ NVL++ + KISDFG S+ + L Y APE+ K
Sbjct: 126 DNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGT-LQYMAPEIIDK 183
Query: 463 LKKANTKT-DVYSLGVTILELLTGKSP----GEPLNGAELPQWVASIVKEEWTNEVFDLE 517
+ K D++SLG TI+E+ TGK P GEP +F +
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------------------QAAMFKVG 225
Query: 518 LMRDAPTIGDELLNTLK-LALHCVDPSPSAR 547
+ + P I + + K L C +P P R
Sbjct: 226 MFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 76
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 134
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 195 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 245
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 246 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 80
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 138
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 249
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 250 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 75
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 244
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 245 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 75
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 244
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 245 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 75
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 244
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 245 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V + M +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 80
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 138
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 249
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 250 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V + M +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 82 LEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 137
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 198 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 246
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 247 PA------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 88
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 146
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 207 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 257
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 258 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 285
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 79
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 137
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 198 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 248
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 249 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 80
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 138
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 249
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 250 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 77
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 135
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 196 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 246
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 247 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 42/256 (16%)
Query: 293 EIMGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNL 345
E +G+ +G VYK L E VA+K L++K RE F E L +++HPN+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 346 LALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPI-------------DWPTRMK 391
+ L + K + L ++F Y HG L FL R P + + + P +
Sbjct: 92 VCLLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 392 IIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
++ + G+ +L S+ +++H +L + NVL+ D N KISD GL R +
Sbjct: 150 LVAQIAAGMEYL-SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL------------ 497
+ + APE K + +D++S GV + E+ + G P + ++
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 268
Query: 498 ----PQWVASIVKEEW 509
P WV +++ E W
Sbjct: 269 PDDCPAWVYALMIECW 284
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+++G +G V L+ S+ VA+K L+ T+ QR +F E S++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L K ++V + M +GSL +FL + + + +++G+ G+ +L S+
Sbjct: 111 LEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL-SDM 166
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKK 465
+H +L + N+L++ + K+SDFGLSR++ + R +PE +K
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEVFDLELMRDA 522
+ +DV+S G+ + E+++ E P W S ++K +E + L D
Sbjct: 227 FTSASDVWSYGIVLWEVMS---------YGERPYWEMSNQDVIKA--VDEGYRLPPPMDC 275
Query: 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
P +L L C + RP+ Q+V L+++
Sbjct: 276 PAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 77
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 135
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 196 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 246
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 247 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 74 TAP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 128
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL+ + + + APE+ +++ N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 42/256 (16%)
Query: 293 EIMGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNL 345
E +G+ +G VYK L E VA+K L++K RE F E L +++HPN+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 346 LALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPI-------------DWPTRMK 391
+ L + K + L ++F Y HG L FL R P + + + P +
Sbjct: 75 VCLLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 392 IIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
++ + G+ +L S+ +++H +L + NVL+ D N KISD GL R +
Sbjct: 133 LVAQIAAGMEYL-SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL------------ 497
+ + APE K + +D++S GV + E+ + G P + ++
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 251
Query: 498 ----PQWVASIVKEEW 509
P WV +++ E W
Sbjct: 252 PDDCPAWVYALMIECW 267
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + KL++ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 83 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 138
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 198
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 199 FSVASDVWSFGVVLYELFTYIEKSKSP 225
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 76
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 134
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 195 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 245
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 246 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 273
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 27/269 (10%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 75
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 244
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLE 558
+ C +PS RP ++ Q E
Sbjct: 245 MRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + KL++ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 84 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 139
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 200 FSVASDVWSFGVVLYELFTYIEKSKSP 226
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 77
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + ++ + + ++ + +L +N I
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYL-EKKNFI 135
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 196 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 246
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 247 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + KL++ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 85 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 140
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 200
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 201 FSVASDVWSFGVVLYELFTYIEKSKSP 227
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 75
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 244
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 245 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + K L+ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 136
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + KL++ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 109 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 164
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 225 FSVASDVWSFGVVLYELFTYIEKSKSP 251
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + K L+ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 76 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 131
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 192 FSVASDVWSFGVVLYELFTYIEKSKSP 218
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 73
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G SP ++ P V +++++ + +E P EL
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGID----PSQVYELLEKD-----YRMERPEGCPEKVYEL 242
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 243 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + K L+ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 77 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 132
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 192
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 193 FSVASDVWSFGVVLYELFTYIEKSKSP 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + K L+ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 133
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + K L+ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 82 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 137
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 197
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 198 FSVASDVWSFGVVLYELFTYIEKSKSP 224
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + K L+ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 133
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 75
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 244
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 245 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + KL++ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 78 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 133
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 80
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 138
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G S P G +L Q V +++++ + +E P EL
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ-VYELLEKD-----YRMERPEGCPEKVYEL 249
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 250 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 79 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 133
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL+ + + + APE+ +++ N
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + K L+ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 151
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 212 FSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + K L+ +Y+P+GSL +L + ID ++ + +G+ +L +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 151
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 212 FSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 79 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 133
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL+ + + + APE+ +++ N
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 34/287 (11%)
Query: 286 DLLCATAE-IMGKSTYGTVYKATLE----DGSQVAVKRLREKITKGQR-EFESEVSLLGK 339
D C E ++G +G V L+ VA+K L+ T+ QR +F E S++G+
Sbjct: 41 DASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQ 100
Query: 340 IRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTR 398
HPN++ L K ++V ++M +G+L FL G T I + +++G+
Sbjct: 101 FDHPNVVHLEGVVTRGK-PVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAA 156
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR-- 456
G+ +L ++ +H +L + N+L++ + K+SDFGLSR++ + R
Sbjct: 157 GMRYL-ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS---IVKEEWTNEV 513
APE + +K + +DV+S G+ + E+++ E P W S ++K E
Sbjct: 216 APEAIQYRKFTSASDVWSYGIVMWEVMS---------YGERPYWDMSNQDVIKA--IEEG 264
Query: 514 FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+ L D P +L L C + RP+ Q+V L+++
Sbjct: 265 YRLPAPMDCPA------GLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 74 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 128
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL+ + + + APE+ +++ N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 18 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 76 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 130
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL+ + + + APE+ +++ N
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNIN 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 43 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 101 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 155
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL+ + + + APE+ +++ N
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNIN 240
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 102 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 156
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL+ + + + APE+ +++ N
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 32/283 (11%)
Query: 294 IMGKSTYGTVYKATL--EDGS--QVAVKRLREKITKGQ--REFESEVSLLGKIRHPNL-- 345
++GK +G+V +A L EDGS +VAVK L+ I EF E + + + HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 346 ---LALRAYYLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWP--TRMKIIKGMTRG 399
++LR+ G +++ +M HG L FL A R E P + P T ++ + + G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L S+ N IH +L + N +L + ++DFGLSR + + + A
Sbjct: 150 MEYL-SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E +DV++ GVT+ E++T G++P + AE+ N +
Sbjct: 209 ESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI------------YNYLIGGN 256
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ P +E+ + L C P RP + +LE I
Sbjct: 257 RLKQPPECMEEVYD---LMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 23/267 (8%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY- 352
+G YG VY + S VAVK L+E T EF E +++ +I+HPNL+ L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
L P +V +YMP+G+L +L E + + + ++ + +L +N IH
Sbjct: 99 LEPPF--YIVTEYMPYGNLLDYLRECNREE-VTAVVLLYMATQISSAMEYL-EKKNFIHR 154
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
+L + N L+ ++ K++DFGLSRLM + + APE + K+DV
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 473 YSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLN 531
++ GV + E+ T G S P G +L Q V ++++ + +E P EL+
Sbjct: 215 WAFGVLLWEIATYGMS---PYPGIDLSQ-VYDLLEKG-----YRMEQPEGCPPKVYELMR 265
Query: 532 TLKLALHCVDPSPSARPEVLQVVQQLE 558
C SP+ RP + Q E
Sbjct: 266 A------CWKWSPADRPSFAETHQAFE 286
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G YG VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 73
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G SP ++ P V +++++ + +E P EL
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGID----PSQVYELLEKD-----YRMERPEGCPEKVYEL 242
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 243 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 295 MGKSTYGTVYKAT---LED--GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V L+D G VAVK+L+ + R+FE E+ +L ++H N++ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 350 --AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y G + KL++ +++P+GSL +L + ID ++ + +G+ +L +
Sbjct: 81 GVCYSAGRRNLKLIM-EFLPYGSLREYLQKH--KERIDHIKLLQYTSQICKGMEYL-GTK 136
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKK 465
IH +L + N+L+++ KI DFGL++++ + + APE K
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 466 ANTKTDVYSLGVTILELLT----GKSP 488
+ +DV+S GV + EL T KSP
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 52/297 (17%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQV--AVKRLREKITKG-QREFESEVSLLGKI-RHPNLLA 347
+++G+ +G V KA ++ DG ++ A+KR++E +K R+F E+ +L K+ HPN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 348 LRAYYLGP---KGEKLLVFDYMPHGSLATFLH-------------ARGPETPIDWPTRMK 391
L LG +G L +Y PHG+L FL A + + +
Sbjct: 88 L----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 392 IIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX 451
+ RG+ +L S + IH NL + N+L+ ++ AKI+DFGLSR
Sbjct: 144 FAADVARGMDYL-SQKQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 200
Query: 452 XLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEE-- 508
+ + A E T +DV+S GV + E+++ G +P + AEL + + + E
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 260
Query: 509 --WTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+EV+D LMR C P RP Q++ L + E
Sbjct: 261 LNCDDEVYD--LMR-----------------QCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 74 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 128
Query: 413 NLTSSNVLLDDSTNAKISDFGL-SRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL + + + APE+ +++ N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 36 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 94 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 148
Query: 413 NLTSSNVLLDDSTNAKISDFGL-SRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL + + + APE+ +++ N
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAE 496
++DVY+ G+ + EL+TG+ P +N +
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINNRD 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALRAYY 352
+G ++GTVYK VAVK L Q + F++EV +L K RH N+L Y
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P + +V + SL LH ET + + I + +G+ +LH+ ++IIH
Sbjct: 102 TKP--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHR 156
Query: 413 NLTSSNVLLDDSTNAKISDFGL-SRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN---T 468
+L S+N+ L + KI DFGL + + + APE+ +++ N
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 469 KTDVYSLGVTILELLTGKSPGEPLN 493
++DVY+ G+ + EL+TG+ P +N
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 295 MGKSTYGTVYKATLEDGS-QVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G +G VY+ + S VAVK L+E T EF E +++ +I+HPNL+ L L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL----L 73
Query: 354 GPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
G + ++ ++M +G+L +L + + + + ++ + +L +N I
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL-EKKNFI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+ ++ K++DFGLSRLM + + APE K + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ GV + E+ T G SP ++ P V +++++ + +E P EL
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGID----PSQVYELLEKD-----YRMERPEGCPEKVYEL 242
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+ C +PS RP ++ Q E + E
Sbjct: 243 MRA------CWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ KIRH L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 140
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 201 FGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 140
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 201 FGILLTELTTKGRVP 215
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 70
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRM--KIIKGMTRGLLHLHSNEN 408
+ + ++ +YM +GSL FL G + I+ M +I +GM N
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA-----FIEERN 125
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
IH NL ++N+L+ D+ + KI+DFGL+RL+ + + APE
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 185
Query: 469 KTDVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
K+DV+S G+ + E++T G+ P + E+ Q
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 217
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 140
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 201 FGILLTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 140
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 201 FGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 75
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 133
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 194 FGILLTELTTKGRVP 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L TF+ A T I P + + +GL HS+
Sbjct: 71 LDV-IHTENKLYLVFEFL-HQDLKTFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 126
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 140
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 201 FGILLTELTTKGRVP 215
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 72
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 130
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 191 FGILLTELTTKGRVP 205
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 73
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 131
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 192 FGILLTELTTKGRVP 206
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 52/297 (17%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQV--AVKRLREKITKG-QREFESEVSLLGKI-RHPNLLA 347
+++G+ +G V KA ++ DG ++ A+KR++E +K R+F E+ +L K+ HPN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 348 LRAYYLGP---KGEKLLVFDYMPHGSLATFLH-------------ARGPETPIDWPTRMK 391
L LG +G L +Y PHG+L FL A + + +
Sbjct: 91 L----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 392 IIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX 451
+ RG+ +L S + IH +L + N+L+ ++ AKI+DFGLSR
Sbjct: 147 FAADVARGMDYL-SQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 203
Query: 452 XLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEE-- 508
+ + A E T +DV+S GV + E+++ G +P + AEL + + + E
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 263
Query: 509 --WTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+EV+D LMR C P RP Q++ L + E
Sbjct: 264 LNCDDEVYD--LMR-----------------QCWREKPYERPSFAQILVSLNRMLEE 301
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 71
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 129
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 190 FGILLTELTTKGRVP 204
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 52/297 (17%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQV--AVKRLREKITKG-QREFESEVSLLGKI-RHPNLLA 347
+++G+ +G V KA ++ DG ++ A+KR++E +K R+F E+ +L K+ HPN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 348 LRAYYLGP---KGEKLLVFDYMPHGSLATFLH-------------ARGPETPIDWPTRMK 391
L LG +G L +Y PHG+L FL A + + +
Sbjct: 81 L----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 392 IIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX 451
+ RG+ +L S + IH +L + N+L+ ++ AKI+DFGLSR
Sbjct: 137 FAADVARGMDYL-SQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 193
Query: 452 XLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEE-- 508
+ + A E T +DV+S GV + E+++ G +P + AEL + + + E
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 253
Query: 509 --WTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563
+EV+D LMR C P RP Q++ L + E
Sbjct: 254 LNCDDEVYD--LMR-----------------QCWREKPYERPSFAQILVSLNRMLEE 291
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 140
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 201 FGILLTELTTKGRVP 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 39/283 (13%)
Query: 295 MGKSTYGTVYKATL-EDGSQVAVKRL--------REKITKGQREFESEVSLLGKIRHPNL 345
+GK +G V+K L +D S VA+K L E I K Q EF+ EV ++ + HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ-EFQREVFIMSNLNHPNI 85
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L P +V +++P G L L + PI W +++++ + G+ ++ +
Sbjct: 86 VKLYGLMHNP---PRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 406 -NENIIHGNLTSSNVLL-----DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
N I+H +L S N+ L + AK++DFGLS+ + APE
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 460 L--SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
++ + K D YS + + +LTG+ P + + ++ ++++EE
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREEGLRPT---- 250
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+ D P L N ++L C P RP +V++L E+
Sbjct: 251 IPEDCPP---RLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE-RMNYVHRDL 306
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 367 FGILLTELTTKGRVP 381
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM G L FL + + P + + + G+ ++ N +H +L
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 140
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 201 FGILLTELTTKGRVP 215
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE-RMNYVHRDL 306
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 367 FGILLTELTTKGRVP 381
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE-RMNYVHRDL 389
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 450 FGILLTELTTKGRVP 464
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERM-NYVHRDL 137
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 198 FGILLTELTTKGRVP 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ AT ++VAVK ++ + F +E +++ ++H L+ L A +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHA--VV 79
Query: 355 PKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K ++ ++M GSL FL + G + P+ P + + G+ + N IH +
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR-NYIHRD 136
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L ++N+L+ S KI+DFGL+R++ + + APE K+DV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 474 SLGVTILELLT-GKSP 488
S G+ ++E++T G+ P
Sbjct: 197 SFGILLMEIVTYGRIP 212
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE-RMNYVHRDL 306
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 367 FGILLTELTTKGRVP 381
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 69
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRM--KIIKGMTRGLLHLHSNEN 408
+ + ++ +YM +GSL FL G + I+ M +I +GM N
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA-----FIEERN 124
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
IH +L ++N+L+ D+ + KI+DFGL+RL+ + + APE
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 184
Query: 469 KTDVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
K+DV+S G+ + E++T G+ P + E+ Q
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 216
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERM-NYVHRDL 137
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 198 FGILLTELTTKGRVP 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 74
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 76
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 223
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 75
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 132
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 222
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 74
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L TF+ A T I P + + +GL HS+
Sbjct: 67 LDV-IHTENKLYLVFEHV-HQDLKTFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 122
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 83
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 140
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 230
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 80
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 137
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 74
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 79
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 136
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 82
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 139
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 80
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 137
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ T F E ++ K+RH L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM G L FL + + P + + + G+ ++ N +H +L
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM-NYVHRDL 140
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL+RL+ + + APE + + K+DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 201 FGILLTELTTKGRVP 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ AT ++VAVK ++ + F +E +++ ++H L+ L A +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHA--VV 252
Query: 355 PKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K ++ ++M GSL FL + G + P+ P + + G+ + N IH +
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR-NYIHRD 309
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L ++N+L+ S KI+DFGL+R++ + + APE K+DV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 474 SLGVTILELLT-GKSP 488
S G+ ++E++T G+ P
Sbjct: 370 SFGILLMEIVTYGRIP 385
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 84
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 141
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 231
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ + ++VAVK L+ T + F E +L+ ++H L+ R Y +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLV--RLYAVV 77
Query: 355 PKGEKLLVF-DYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+ E + + +YM GSL FL + G + + P + + G+ ++ +N IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE-RKNYIHR 134
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
+L ++NVL+ +S KI+DFGL+R++ + + APE K+DV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 473 YSLGVTILELLT-GKSP 488
+S G+ + E++T GK P
Sbjct: 195 WSFGILLYEIVTYGKIP 211
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 75 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 130
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 189
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 67 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 122
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 67 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 122
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 72 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 127
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 125/272 (45%), Gaps = 29/272 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V + VAVK ++E + + EF E + K+ HP L+ + Y +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLV--KFYGVC 72
Query: 355 PKGEKL-LVFDYMPHGSLATFL--HARGPETPIDWPTRM-KIIKGMTRGLLHLHSNENII 410
K + +V +Y+ +G L +L H +G E P+++ ++ + G+ L S++ I
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLE-----PSQLLEMCYDVCEGMAFLESHQ-FI 126
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L + N L+D K+SDFG++R + + + APE+ K ++K+
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL 529
DV++ G+ + E+ + GK P + +E+ ++K + ++ L D
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEV------VLKVSQGHRLYRPHLASD-------- 232
Query: 530 LNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
++ C P RP Q++ +E +R
Sbjct: 233 -TIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 129/296 (43%), Gaps = 47/296 (15%)
Query: 295 MGKSTYGTVYKAT------LEDGSQVAVKRLREKITKG-QREFESEVSLLGKIRHPNLLA 347
+G+ +G V++A E + VAVK L+E+ + Q +F+ E +L+ + +PN++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 348 LRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPET---------------------PID 385
L + G+ + L+F+YM +G L FL + P T P+
Sbjct: 115 LLG--VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 386 WPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXX 444
++ I + + G+ +L S +H +L + N L+ ++ KI+DFGLSR +
Sbjct: 173 CAEQLCIARQVAAGMAYL-SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 445 XXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASI 504
+ + PE + T++DV++ GV + E+ + +P G +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL--QPYYG---------M 280
Query: 505 VKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
EE V D ++ EL N ++L C P+ RP + + L+ +
Sbjct: 281 AHEEVIYYVRDGNILACPENCPLELYNLMRL---CWSKLPADRPSFCSIHRILQRM 333
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 71 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 126
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 70 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 125
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 69 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 124
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 69 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 124
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 72 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 127
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 71 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 126
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 67 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 122
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 70 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 125
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 67 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 122
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 70 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 125
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 17/201 (8%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLR-----EKITKGQREFESEVSLLGKIRHPNLLA 347
E +G+ TYG VYKA G VA+KR+R E I E+SLL ++ HPN+++
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHHPNIVS 83
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI-IKGMTRGLLHLHSN 406
L + LVF++M L L +T + +++KI + + RG+ H H +
Sbjct: 84 LIDVIHSERCLT-LVFEFM-EKDLKKVLDEN--KTGLQ-DSQIKIYLYQLLRGVAHCHQH 138
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKK 465
I+H +L N+L++ K++DFGL+R L YRAP+ L KK
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 466 ANTKTDVYSLGVTILELLTGK 486
+T D++S+G E++TGK
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 75 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 130
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGXKYYS 189
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 17/201 (8%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLR-----EKITKGQREFESEVSLLGKIRHPNLLA 347
E +G+ TYG VYKA G VA+KR+R E I E+SLL ++ HPN+++
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHHPNIVS 83
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI-IKGMTRGLLHLHSN 406
L + LVF++M L L +T + +++KI + + RG+ H H +
Sbjct: 84 LIDVIHSERCLT-LVFEFM-EKDLKKVLDEN--KTGLQ-DSQIKIYLYQLLRGVAHCHQH 138
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKK 465
I+H +L N+L++ K++DFGL+R L YRAP+ L KK
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 466 ANTKTDVYSLGVTILELLTGK 486
+T D++S+G E++TGK
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 69 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 124
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 69 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 124
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLSFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 277 DGPLMFTADDLLCATAEIMGKSTYGTVYKATLEDGSQ---VAVKRLREKITKGQ-REFES 332
D L D+LL A E +G +G+V + + VA+K L++ K E
Sbjct: 327 DKKLFLKRDNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 385
Query: 333 EVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
E ++ ++ +P ++ L + +LV + G L FL + E P+ ++
Sbjct: 386 EAQIMHQLDNPYIVRLIG--VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAEL 441
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX 452
+ ++ G+ +L +N +H NL + NVLL + AKISDFGLS+ +
Sbjct: 442 LHQVSMGMKYL-EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 500
Query: 453 --LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
L + APE +K ++++DV+S GVT+ E L+ G+ P + + G E+
Sbjct: 501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 295 MGKSTYGTVYKATL-EDGSQVAVKRL--------REKITKGQREFESEVSLLGKIRHPNL 345
+GK +G V+K L +D S VA+K L E I K Q EF+ EV ++ + HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ-EFQREVFIMSNLNHPNI 85
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L P +V +++P G L L + PI W +++++ + G+ ++ +
Sbjct: 86 VKLYGLMHNP---PRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 406 -NENIIHGNLTSSNVLL-----DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
N I+H +L S N+ L + AK++DFG S+ + APE
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 460 L--SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
++ + K D YS + + +LTG+ P + + ++ ++++EE
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREEGLRPT---- 250
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+ D P L N ++L C P RP +V++L E+
Sbjct: 251 IPEDCPP---RLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 295 MGKSTYGTVYKATLE-----DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V + G+ VAVK+L+ QR+F+ E+ +L + ++ R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 350 AYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
GP + L LV +Y+P G L FL +D + + +G+ +L S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR-R 135
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKA 466
+H +L + N+L++ + KI+DFGL++L+ + + APE
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 467 NTKTDVYSLGVTILELLT 484
+ ++DV+S GV + EL T
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 311 GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRAYYLGPKGEK--LLVFDYMP 367
G VAVK L+ R ++ E+ +L + H +++ + +GEK LV +Y+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGC-CEDQGEKSLQLVMEYVP 101
Query: 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNA 427
GSL +L P I + + + G+ +LHS ++ IH NL + NVLLD+
Sbjct: 102 LGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHS-QHYIHRNLAARNVLLDNDRLV 156
Query: 428 KISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
KI DFGL++ + + + APE K K +DV+S GVT+ ELLT
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 295 MGKSTYGTVYKATLE-----DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V + G+ VAVK+L+ QR+F+ E+ +L + ++ R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 350 AYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
GP + L LV +Y+P G L FL +D + + +G+ +L S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR-R 134
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKA 466
+H +L + N+L++ + KI+DFGL++L+ + + APE
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 467 NTKTDVYSLGVTILELLT 484
+ ++DV+S GV + EL T
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 295 MGKSTYGTVYKATL-EDGSQVAVKRL--------REKITKGQREFESEVSLLGKIRHPNL 345
+GK +G V+K L +D S VA+K L E I K Q EF+ EV ++ + HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ-EFQREVFIMSNLNHPNI 85
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L P +V +++P G L L + PI W +++++ + G+ ++ +
Sbjct: 86 VKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 406 -NENIIHGNLTSSNVLL-----DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
N I+H +L S N+ L + AK++DF LS+ + APE
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 460 L--SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
++ + K D YS + + +LTG+ P + + ++ ++++EE
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREEGLRPT---- 250
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+ D P L N ++L C P RP +V++L E+
Sbjct: 251 IPEDCPP---RLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 295 MGKSTYGTVYKATLE-----DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V + G+ VAVK+L+ QR+F+ E+ +L + ++ R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 350 AYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
GP + L LV +Y+P G L FL +D + + +G+ +L S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR-R 147
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKA 466
+H +L + N+L++ + KI+DFGL++L+ + + APE
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 467 NTKTDVYSLGVTILELLT 484
+ ++DV+S GV + EL T
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 294 IMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQ---REFESEVSLLGKIRHPNLLALR 349
++GK ++ VY+A ++ G +VA+K + +K + ++EV + +++HP++L L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y+ LV + +G + +L R P + + G+L+LHS+ I
Sbjct: 78 NYF-EDSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH-GI 133
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H +LT SN+LL + N KI+DFGL+ + Y +PE++ +
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP-NYISPEIATRSAHGLE 192
Query: 470 TDVYSLGVTILELLTGKSP 488
+DV+SLG LL G+ P
Sbjct: 193 SDVWSLGCMFYTLLIGRPP 211
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 295 MGKSTYGTVYKATLE-----DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+GK +G+V + G+ VAVK+L+ QR+F+ E+ +L + ++ R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 350 AYYLGP-KGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
GP + E LV +Y+P G L FL +D + + +G+ +L S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR-R 131
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKA 466
+H +L + N+L++ + KI+DFGL++L+ + + APE
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 467 NTKTDVYSLGVTILELLT 484
+ ++DV+S GV + EL T
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 295 MGKSTYG-TVYKATLEDGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ ++G + + EDG Q +K + +K + E EV++L ++HPN++ R
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG-----PETPIDWPTRMKIIKGMTRGLLHLHSN 406
+ G +V DY G L ++A+ + +DW ++ + L H+H +
Sbjct: 92 F-EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL------ALKHVH-D 143
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
I+H ++ S N+ L ++ DFG++R++ Y +PE+ + K
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPY-YLSPEICENKPY 202
Query: 467 NTKTDVYSLGVTILELLTGKSPGE 490
N K+D+++LG + EL T K E
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFE 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 277 DGPLMFTADDLLCATAEIMGKSTYGTVYKATLEDGSQ---VAVKRLREKITKGQ-REFES 332
D L D+LL A E+ G +G+V + + VA+K L++ K E
Sbjct: 1 DKKLFLKRDNLLIADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 59
Query: 333 EVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
E ++ ++ +P ++ L + +LV + G L FL + E P+ ++
Sbjct: 60 EAQIMHQLDNPYIVRLIG--VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAEL 115
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX 452
+ ++ G+ +L +N +H +L + NVLL + AKISDFGLS+ +
Sbjct: 116 LHQVSMGMKYL-EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 453 --LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
L + APE +K ++++DV+S GVT+ E L+ G+ P + + G E+
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G G V+ ++VAVK L++ + F +E +L+ +++H L+ R Y
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV--RLY 74
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + ++ +YM +GSL FL G + I+ + + + G+ + N I
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER-NYI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H +L ++N+L+ D+ + KI+DFGL+RL+ + + APE K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 471 DVYSLGVTILELLT-GKSPGEPLNGAELPQ 499
DV+S G+ + E++T G+ P + E+ Q
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G+ +G V+ T ++VA+K L+ F E ++ K+RH L+ L Y +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414
+ +V +YM GSL FL + + P + + + G+ ++ N +H +L
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE-RMNYVHRDL 307
Query: 415 TSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYS 474
++N+L+ ++ K++DFGL RL+ + + APE + + K+DV+S
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 475 LGVTILELLT-GKSP 488
G+ + EL T G+ P
Sbjct: 368 FGILLTELTTKGRVP 382
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 311 GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRAYYLGPKGEK--LLVFDYMP 367
G VAVK L+ R ++ E+ +L + H +++ + +GEK LV +Y+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGC-CEDQGEKSLQLVMEYVP 101
Query: 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNA 427
GSL +L P I + + + G+ +LH+ ++ IH NL + NVLLD+
Sbjct: 102 LGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHA-QHYIHRNLAARNVLLDNDRLV 156
Query: 428 KISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
KI DFGL++ + + + APE K K +DV+S GVT+ ELLT
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ + ++VAVK L+ T + F E +L+ ++H L+ R Y +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLV--RLYAVV 76
Query: 355 PKGEKLLVF-DYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
K E + + ++M GSL FL + G + + P + + G+ ++ +N IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE-RKNYIHR 133
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
+L ++NVL+ +S KI+DFGL+R++ + + APE K++V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 473 YSLGVTILELLT-GKSP 488
+S G+ + E++T GK P
Sbjct: 194 WSFGILLYEIVTYGKIP 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQR---EFESEVSLLGKIRHPNLLAL 348
EI+G V+ A L D VAVK LR + + F E + HP ++A+
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 349 RAYYLG----PKGE-KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
Y G P G +V +Y+ +L +H GP TP +++I + L
Sbjct: 78 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFS 132
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX--XLGYRAPELS 461
H N IIH ++ +N+L+ + K+ DFG++R + Y +PE +
Sbjct: 133 HQN-GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + ++DVYSLG + E+LTG+ P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+ ++R + T+G E+SLL ++ HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 68 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+ ++R + T+G E+SLL ++ HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ H L F+ A T I P + + +GL HS+
Sbjct: 67 LDV-IHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 122
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 39/255 (15%)
Query: 274 VHFDGPLMFTADDLLCAT-----AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQ 327
++F GP MF + ++GK ++G V + G + AVK + ++ K +
Sbjct: 14 LYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK 73
Query: 328 REFES---EVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPI 384
+ ES EV LL ++ HPN++ L ++ KG LV + G L + +R + +
Sbjct: 74 TDKESLLREVQLLKQLDHPNIMKLYEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEV 132
Query: 385 DWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST---NAKISDFGLSRLMXXX 441
D +II+ + G+ ++H N+ I+H +L N+LL+ + N +I DFGLS
Sbjct: 133 D---AARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 188
Query: 442 XXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGA------ 495
Y APE+ + K DV+S GV + LL+G P P NGA
Sbjct: 189 KKMKDKIGTAY--YIAPEVLH-GTYDEKCDVWSTGVILYILLSG-CP--PFNGANEYDIL 242
Query: 496 ----------ELPQW 500
ELPQW
Sbjct: 243 KKVEKGKYTFELPQW 257
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQR---EFESEVSLLGKIRHPNLLAL 348
EI+G V+ A L D VAVK LR + + F E + HP ++A+
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 349 RAYYLG----PKGE-KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
Y G P G +V +Y+ +L +H GP TP +++I + L
Sbjct: 78 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFS 132
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX--XLGYRAPELS 461
H N IIH ++ +N+++ + K+ DFG++R + Y +PE +
Sbjct: 133 HQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + ++DVYSLG + E+LTG+ P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQR---EFESEVSLLGKIRHPNLLAL 348
EI+G V+ A L D VAVK LR + + F E + HP ++A+
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 349 RAYYLG----PKGE-KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
Y G P G +V +Y+ +L +H GP TP +++I + L
Sbjct: 78 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFS 132
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX--XLGYRAPELS 461
H N IIH ++ +N+++ + K+ DFG++R + Y +PE +
Sbjct: 133 HQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + ++DVYSLG + E+LTG+ P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLL-ALRA 350
E +G+ GTVY A + G +VA++++ + + +E+ ++ + ++PN++ L +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y +G E +V +Y+ GSL + ET +D + + + L LHSN+ +I
Sbjct: 87 YLVG--DELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSNQ-VI 139
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H N+ S N+LL + K++DFG + + APE+ K K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKV 198
Query: 471 DVYSLGVTILELLTGKSP 488
D++SLG+ +E++ G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
E++G+ +G V KA VA+K++ + + + F E+ L ++ HPN++ L
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE--NII 410
L P LV +Y GSL LH P M ++G+ +LHS + +I
Sbjct: 72 LNPV---CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 411 HGNLTSSNVLL-DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
H +L N+LL T KI DFG + + APE+ + + K
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 470 TDVYSLGVTILELLTGKSPGEPLNG 494
DV+S G+ + E++T + P + + G
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGG 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
E++G+ +G V KA VA+K++ + + + F E+ L ++ HPN++ L
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE--NII 410
L P LV +Y GSL LH P M ++G+ +LHS + +I
Sbjct: 71 LNPV---CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 411 HGNLTSSNVLL-DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
H +L N+LL T KI DFG + + APE+ + + K
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 470 TDVYSLGVTILELLTGKSPGEPLNG 494
DV+S G+ + E++T + P + + G
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGG 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 28/273 (10%)
Query: 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLRE--KITKGQREFESEVSLLGKIRHPNL 345
L E +GK ++G V+K QV ++ + + + + E+++L + +
Sbjct: 24 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 346 LALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
YL KG KL ++ +Y+ GS L A P D ++K + +GL +LH
Sbjct: 84 TKYYGSYL--KGSKLWIIMEYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLH 137
Query: 405 SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 464
S E IH ++ ++NVLL + + K++DFG++ + + APE+ +
Sbjct: 138 S-EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIQQS 195
Query: 465 KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524
++K D++SLG+T +EL + GEP N P V ++ + + PT
Sbjct: 196 AYDSKADIWSLGITAIEL----AKGEPPNSDMHPMRVLFLIPK------------NNPPT 239
Query: 525 IGDELLNTLKLALH-CVDPSPSARPEVLQVVQQ 556
+ + + K + C++ PS RP ++++
Sbjct: 240 LVGDFTKSFKEFIDACLNKDPSFRPTAKELLKH 272
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 29/277 (10%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKG-QREFESEVSLLGKIRHPNLLALR 349
E +G+ +G V+ L D + VAVK RE + + +F E +L + HPN++ L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL- 177
Query: 350 AYYLGPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
+G +K +V + + G TFL G + T ++++ G+ +L S
Sbjct: 178 ---IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLES- 231
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELSKLKK 465
+ IH +L + N L+ + KISDFG+SR + + APE +
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 466 ANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524
++++DV+S G+ + E + G SP L+ + ++V E + EL DA
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------EKGGRLPCPELCPDA-- 343
Query: 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
+L C P RP + Q+L+ IR
Sbjct: 344 -------VFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 29/277 (10%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKG-QREFESEVSLLGKIRHPNLLALR 349
E +G+ +G V+ L D + VAVK RE + + +F E +L + HPN++ L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL- 177
Query: 350 AYYLGPKGEK---LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
+G +K +V + + G TFL G + T ++++ G+ +L S
Sbjct: 178 ---IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLES- 231
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELSKLKK 465
+ IH +L + N L+ + KISDFG+SR + + APE +
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 466 ANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524
++++DV+S G+ + E + G SP L+ + ++V E + EL DA
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------EKGGRLPCPELCPDA-- 343
Query: 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
+L C P RP + Q+L+ IR
Sbjct: 344 -------VFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 25/221 (11%)
Query: 292 AEIMGKSTYGTVYKAT-LEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNL 345
+++G +GTVYK + DG V A+K LRE + K +E E ++ + P +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR------GPETPIDWPTRMKIIKGMTRG 399
L L + LV MP+G L H R G + ++W M+I KGM+
Sbjct: 82 SRLLGICLTSTVQ--LVTQLMPYGCLLD--HVRENRGRLGSQDLLNWC--MQIAKGMS-- 133
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAP 458
+ ++H +L + NVL+ + KI+DFGL+RL+ + + A
Sbjct: 134 ---YLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELP 498
E ++ ++DV+S GVT+ EL+T G P + + E+P
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP 231
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 110/260 (42%), Gaps = 34/260 (13%)
Query: 295 MGKSTYGTVYKATLEDG-SQVAVKRLRE-------------KITKGQREFESEVSLLGKI 340
+G YG V ++G S+ A+K +++ I K E +E+SLL +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
HPN++ L + K LV ++ G L + R D I+K + G+
Sbjct: 104 DHPNIIKLFDVF-EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN---IMKQILSGI 159
Query: 401 LHLHSNENIIHGNLTSSNVLLDDST---NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRA 457
+LH + NI+H ++ N+LL++ N KI DFGLS Y A
Sbjct: 160 CYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY--YIA 216
Query: 458 PELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
PE+ K KK N K DV+S GV + LL G P N ++ I K E FD
Sbjct: 217 PEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI------IKKVEKGKYYFDF- 268
Query: 518 LMRDAPTIGDELLNTLKLAL 537
D I DE +KL L
Sbjct: 269 --NDWKNISDEAKELIKLML 286
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ L F+ A T I P + + +GL HS+
Sbjct: 70 LDV-IHTENKLYLVFEFLSM-DLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 125
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ L F+ A T I P + + +GL HS+
Sbjct: 71 LDV-IHTENKLYLVFEFLSM-DLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 126
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ L F+ A T I P + + +GL HS+
Sbjct: 71 LDV-IHTENKLYLVFEFLSM-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 126
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLL-ALRA 350
E +G+ GTVY A + G +VA++++ + + +E+ ++ + ++PN++ L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y +G E +V +Y+ GSL + ET +D + + + L LHSN+ +I
Sbjct: 86 YLVG--DELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSNQ-VI 138
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ S N+LL + K++DFG + + APE+ K K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKV 197
Query: 471 DVYSLGVTILELLTGKSP 488
D++SLG+ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G+ +YG+VYKA E G VA+K++ + +E E+S++ + P+++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
Y + +V +Y GS++ + R D I++ +GL +LH I H
Sbjct: 93 YFK-NTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLHFMRKI-H 148
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ + N+LL+ +AK++DFG++ + + APE+ + N D
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF-WMAPEVIQEIGYNCVAD 207
Query: 472 VYSLGVTILELLTGKSP 488
++SLG+T +E+ GK P
Sbjct: 208 IWSLGITAIEMAEGKPP 224
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLL-ALRA 350
E +G+ GTVY A + G +VA++++ + + +E+ ++ + ++PN++ L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y +G E +V +Y+ GSL + ET +D + + + L LHSN+ +I
Sbjct: 86 YLVG--DELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSNQ-VI 138
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ S N+LL + K++DFG + + APE+ K K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPY-WMAPEVVTRKAYGPKV 197
Query: 471 DVYSLGVTILELLTGKSP 488
D++SLG+ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ L F+ A T I P + + +GL HS+
Sbjct: 69 LDV-IHTENKLYLVFEFLSM-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 124
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 29/208 (13%)
Query: 295 MGKSTYGTVYKATLED---GSQVAVKRL----REKITKGQREFESEVSLLGKIRHPNLLA 347
+G TVY A ED +VA+K + REK +R FE EV ++ H N+++
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKR-FEREVHNSSQLSHQNIVS 75
Query: 348 L-------RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
+ YYL V +Y+ +L+ ++ + GP + T + + G+
Sbjct: 76 MIDVDEEDDCYYL--------VMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGI 124
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL 460
H H + I+H ++ N+L+D + KI DFG+++ + + Y +PE
Sbjct: 125 KHAH-DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+K + + TD+YS+G+ + E+L G+ P
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLL-ALRA 350
E +G+ GTVY A + G +VA++++ + + +E+ ++ + ++PN++ L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y +G E +V +Y+ GSL + ET +D + + + L LHSN+ +I
Sbjct: 86 YLVG--DELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSNQ-VI 138
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ S N+LL + K++DFG + + APE+ K K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY-WMAPEVVTRKAYGPKV 197
Query: 471 DVYSLGVTILELLTGKSP 488
D++SLG+ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 33/270 (12%)
Query: 301 GTVYKATLEDGSQVAVK--RLREKITKGQREFESEVSLLGKIRHPNLL-ALRAYYLGPKG 357
G ++K + G+ + VK ++R+ T+ R+F E L HPN+L L A P
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 358 EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII-HGNLTS 416
L+ +MP+GSL LH G +D +K M RG+ LH+ E +I L S
Sbjct: 83 HPTLITHWMPYGSLYNVLH-EGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNS 141
Query: 417 SNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK---TDVY 473
+V++D+ A+IS + + APE + K +T D++
Sbjct: 142 RSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMW 195
Query: 474 SLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDA--PTIGDELLN 531
S V + EL+T + P L+ E+ VA LE +R P I +
Sbjct: 196 SFAVLLWELVTREVPFADLSNMEIGMKVA-------------LEGLRPTIPPGISPHVSK 242
Query: 532 TLKLALHCVDPSPSARPEVLQVVQQLEEIR 561
+K+ C++ P+ RP+ +V LE+++
Sbjct: 243 LMKI---CMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLL-ALRA 350
E +G+ GTVY A + G +VA++++ + + +E+ ++ + ++PN++ L +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y +G E +V +Y+ GSL + ET +D + + + L LHSN+ +I
Sbjct: 87 YLVG--DELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSNQ-VI 139
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ S N+LL + K++DFG + + APE+ K K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY-WMAPEVVTRKAYGPKV 198
Query: 471 DVYSLGVTILELLTGKSP 488
D++SLG+ +E++ G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 40/233 (17%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLL 346
++GK ++G V K T G + AVK + ++ K + + ES EV LL ++ HPN++
Sbjct: 33 VLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L ++ KG LV + G L + +R + +D +II+ + G+ ++H N
Sbjct: 90 KLYEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN 145
Query: 407 ENIIHGNLTSSNVLLDDST---NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
+ I+H +L N+LL+ + N +I DFGLS Y APE+
Sbjct: 146 K-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY--YIAPEVLH- 201
Query: 464 KKANTKTDVYSLGVTILELLTGKSPGEPLNGA----------------ELPQW 500
+ K DV+S GV + LL+G P P NGA ELPQW
Sbjct: 202 GTYDEKCDVWSTGVILYILLSG-CP--PFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLAL 348
E +G+ TYG VYKA + G VA+K++R + T+G E+SLL ++ HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + LVF+++ L F+ A T I P + + +GL HS+
Sbjct: 71 LDV-IHTENKLYLVFEHVDQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-R 126
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKAN 467
++H +L N+L++ K++DFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 468 TKTDVYSLGVTILELLTGKS--PGE 490
T D++SLG E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 311 GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRAYYLGPKGEK--LLVFDYMP 367
G VAVK L+E R ++ E+ +L + H +++ + +GEK LV +Y+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGC-CEDQGEKSVQLVMEYVP 96
Query: 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNA 427
GSL +L P + + + + G+ +LH+ ++ IH L + NVLLD+
Sbjct: 97 LGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLV 151
Query: 428 KISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
KI DFGL++ + + + APE K K +DV+S GVT+ ELLT
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 311 GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRAYYLGPKGEK--LLVFDYMP 367
G VAVK L+E R ++ E+ +L + H +++ + +GEK LV +Y+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGC-CEDQGEKSVQLVMEYVP 95
Query: 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNA 427
GSL +L P + + + + G+ +LH+ ++ IH L + NVLLD+
Sbjct: 96 LGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLV 150
Query: 428 KISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
KI DFGL++ + + + APE K K +DV+S GVT+ ELLT
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V+ AT ++VAVK ++ + F +E +++ ++H L+ L A +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHA--VV 246
Query: 355 PKGEKLLVFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K ++ ++M GSL FL + G + P+ P + + G+ + N IH +
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE-QRNYIHRD 303
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L ++N+L+ S KI+DFGL+R+ + + APE K+DV+
Sbjct: 304 LRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 474 SLGVTILELLT-GKSPGEPLNGAEL 497
S G+ ++E++T G+ P ++ E+
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEV 378
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 26/287 (9%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-----------REFESEVSLLGKIRH 342
+ +YG V +G VA+KR+ ++ G+ + E+ LL H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 343 PNLLALR---AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRG 399
PN+L LR ++ P KL + + LA +H + + P ++
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH---DQRIVISPQHIQYFMYHILL 145
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
LH+ ++H +L N+LL D+ + I DF L+R YRAPE
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPE 203
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518
L K TK D++S G + E+ K+ G+ + IV+ T ++ D+ +
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKA---LFRGSTFYNQLNKIVEVVGTPKIEDV-V 259
Query: 519 MRDAPTIGDELLNTLK--LALHCVDPSPSARPEVLQVVQQLEEIRPE 563
M +P+ D L N+L A P+A P L ++ ++ E P+
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ 306
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 26/287 (9%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-----------REFESEVSLLGKIRH 342
+ +YG V +G VA+KR+ ++ G+ + E+ LL H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 343 PNLLALR---AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRG 399
PN+L LR ++ P KL + + LA +H + + P ++
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH---DQRIVISPQHIQYFMYHILL 145
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
LH+ ++H +L N+LL D+ + I DF L+R YRAPE
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPE 203
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518
L K TK D++S G + E+ K+ G+ + IV+ T ++ D+ +
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKA---LFRGSTFYNQLNKIVEVVGTPKIEDV-V 259
Query: 519 MRDAPTIGDELLNTLK--LALHCVDPSPSARPEVLQVVQQLEEIRPE 563
M +P+ D L N+L A P+A P L ++ ++ E P+
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ 306
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 40/233 (17%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLL 346
++GK ++G V K T G + AVK + ++ K + + ES EV LL ++ HPN++
Sbjct: 56 VLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L ++ KG LV + G L + +R + +D +II+ + G+ ++H N
Sbjct: 113 KLYEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN 168
Query: 407 ENIIHGNLTSSNVLLDDST---NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
+ I+H +L N+LL+ + N +I DFGLS Y APE+
Sbjct: 169 K-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY--YIAPEVLH- 224
Query: 464 KKANTKTDVYSLGVTILELLTGKSPGEPLNGA----------------ELPQW 500
+ K DV+S GV + LL+G P P NGA ELPQW
Sbjct: 225 GTYDEKCDVWSTGVILYILLSG-CP--PFNGANEYDILKKVEKGKYTFELPQW 274
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRA 350
E +G +G V + +D G QVA+K+ R++++ RE + E+ ++ K+ HPN+++ R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 351 Y-----YLGPKGEKLLVFDYMPHGSLATFLHARG-----PETPIDWPTRMKIIKGMTRGL 400
L P LL +Y G L +L+ E PI ++ ++ L
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-----RTLLSDISSAL 134
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNA---KISDFGLSRLMXXXXXXXXXXXXXXLGYRA 457
+LH N IIH +L N++L KI D G ++ + L Y A
Sbjct: 135 RYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT--LQYLA 191
Query: 458 PELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
PEL + KK D +S G E +TG P P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRA 350
E +G +G V + +D G QVA+K+ R++++ RE + E+ ++ K+ HPN+++ R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 351 Y-----YLGPKGEKLLVFDYMPHGSLATFLHARG-----PETPIDWPTRMKIIKGMTRGL 400
L P LL +Y G L +L+ E PI ++ ++ L
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-----RTLLSDISSAL 135
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNA---KISDFGLSRLMXXXXXXXXXXXXXXLGYRA 457
+LH N IIH +L N++L KI D G ++ + L Y A
Sbjct: 136 RYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT--LQYLA 192
Query: 458 PELSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
PEL + KK D +S G E +TG P P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 40/233 (17%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLL 346
++GK ++G V K T G + AVK + ++ K + + ES EV LL ++ HPN++
Sbjct: 57 VLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L ++ KG LV + G L + +R + +D +II+ + G+ ++H N
Sbjct: 114 KLYEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN 169
Query: 407 ENIIHGNLTSSNVLLDDST---NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
+ I+H +L N+LL+ + N +I DFGLS Y APE+
Sbjct: 170 K-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY--YIAPEVLH- 225
Query: 464 KKANTKTDVYSLGVTILELLTGKSPGEPLNGA----------------ELPQW 500
+ K DV+S GV + LL+G P P NGA ELPQW
Sbjct: 226 GTYDEKCDVWSTGVILYILLSG-CP--PFNGANEYDILKKVEKGKYTFELPQW 275
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 281 MFTADD---LLCATAEIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFES---E 333
+F DD L EI G ++G VY A + + VA+K++ + +++ E
Sbjct: 46 LFFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 104
Query: 334 VSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKII 393
V L K+RHPN + R YL + LV +Y GS + L + P+ +
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLR-EHTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVT 160
Query: 394 KGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXL 453
G +GL +LHS+ N+IH ++ + N+LL + K+ DFG + +M
Sbjct: 161 HGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY---- 215
Query: 454 GYRAPEL---SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ APE+ + + K DV+SLG+T +EL K P
Sbjct: 216 -WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 30/283 (10%)
Query: 278 GPLMFTADDLLCATAEIMGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESE 333
GP + +D +GK +G VY A + + A+K L + ++ K + + E
Sbjct: 1 GPRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 334 VSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKII 393
V + +RHPN+L L Y+ L+ +Y P G++ L + D I
Sbjct: 59 VEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYI 114
Query: 394 KGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXL 453
+ L + HS + +IH ++ N+LL + KI+DFG S L
Sbjct: 115 TELANALSYCHS-KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTL 170
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV 513
Y PE+ + + + K D++SLGV E L GK P E E + ++ + E+T
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPD 227
Query: 514 FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556
F E RD L++ L + +PS RP + +V++
Sbjct: 228 FVTEGARD-------LISRL------LKHNPSQRPMLREVLEH 257
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 30/283 (10%)
Query: 278 GPLMFTADDLLCATAEIMGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESE 333
GP + +D +GK +G VY A + + A+K L + ++ K + + E
Sbjct: 1 GPRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 334 VSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKII 393
V + +RHPN+L L Y+ L+ +Y P G++ L + D I
Sbjct: 59 VEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYI 114
Query: 394 KGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXL 453
+ L + HS + +IH ++ N+LL + KI+DFG S L
Sbjct: 115 TELANALSYCHS-KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTL 170
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV 513
Y PE+ + + + K D++SLGV E L GK P E E + ++ + E+T
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPD 227
Query: 514 FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556
F E RD L++ L + +PS RP + +V++
Sbjct: 228 FVTEGARD-------LISRL------LKHNPSQRPMLREVLEH 257
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V VA+K ++E + + EF E ++ + H L+ L Y +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL--YGVC 68
Query: 355 PKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K + + +YM +G L +L R +++ K + + +L S + +H +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 125
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L++D K+SDFGLSR + + + PE+ K ++K+D++
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVA 502
+ GV + E+ + GK P E +E + +A
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 281 MFTADD---LLCATAEIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFES---E 333
+F DD L EI G ++G VY A + + VA+K++ + +++ E
Sbjct: 7 LFFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65
Query: 334 VSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKII 393
V L K+RHPN + R YL + LV +Y GS + L + P+ +
Sbjct: 66 VRFLQKLRHPNTIQYRGCYLR-EHTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVT 121
Query: 394 KGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXL 453
G +GL +LHS+ N+IH ++ + N+LL + K+ DFG + +M
Sbjct: 122 HGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY---- 176
Query: 454 GYRAPEL---SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ APE+ + + K DV+SLG+T +EL K P
Sbjct: 177 -WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V VA+K ++E + + EF E ++ + H L+ L Y +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL--YGVC 72
Query: 355 PKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K + + +YM +G L +L R +++ K + + +L S + +H +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 129
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L++D K+SDFGLSR + + + PE+ K ++K+D++
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVA 502
+ GV + E+ + GK P E +E + +A
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V VA+K ++E + + EF E ++ + H L+ L Y +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL--YGVC 88
Query: 355 PKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K + + +YM +G L +L R +++ K + + +L S + +H +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 145
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L++D K+SDFGLSR + + + PE+ K ++K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVA 502
+ GV + E+ + GK P E +E + +A
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V VA+K ++E + + EF E ++ + H L+ L Y +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL--YGVC 88
Query: 355 PKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K + + +YM +G L +L R +++ K + + +L S + +H +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 145
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L++D K+SDFGLSR + + + PE+ K ++K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVA 502
+ GV + E+ + GK P E +E + +A
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 8/211 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V VA+K ++E + + EF E ++ + H L+ L Y +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL--YGVC 73
Query: 355 PKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K + + +YM +G L +L R +++ K + + +L S + +H +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 130
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L++D K+SDFGLSR + + + PE+ K ++K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVAS 503
+ GV + E+ + GK P E +E + +A
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 311 GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRAYYLGPKGEKL-LVFDYMPH 368
G VAVK L+ R ++ E+ +L + H +++ + L LV +Y+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAK 428
GSL +L P I + + + G+ +LH+ ++ IH +L + NVLLD+ K
Sbjct: 120 GSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHA-QHYIHRDLAARNVLLDNDRLVK 174
Query: 429 ISDFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
I DFGL++ + + + APE K K +DV+S GVT+ ELLT
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFESEVSLLGKIRHPNLLALRA 350
E++G V A +VA+KR+ EK E E+ + + HPN+++
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLH---ARGPETP--IDWPTRMKIIKGMTRGLLHLHS 405
++ K E LV + GS+ + A+G +D T I++ + GL +LH
Sbjct: 81 SFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXL----GYRAPE-L 460
N I H ++ + N+LL + + +I+DFG+S + + APE +
Sbjct: 140 NGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+++ + K D++S G+T +EL TG +P
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLR-EKITKGQREFESEVSLLGKIRHPNLLALRA 350
E++G V A +VA+KR+ EK E E+ + + HPN+++
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLH---ARGPETP--IDWPTRMKIIKGMTRGLLHLHS 405
++ K E LV + GS+ + A+G +D T I++ + GL +LH
Sbjct: 76 SFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXL----GYRAPE-L 460
N I H ++ + N+LL + + +I+DFG+S + + APE +
Sbjct: 135 NGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+++ + K D++S G+T +EL TG +P
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V VA+K ++E + + EF E ++ + H L+ L Y +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL--YGVC 73
Query: 355 PKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K + + +YM +G L +L R +++ K + + +L S + +H +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 130
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L++D K+SDFGLSR + + + PE+ K ++K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVA 502
+ GV + E+ + GK P E +E + +A
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G + L + D I + L + HS + +I
Sbjct: 81 YF-HDATRVYLILEYAPRGEVYKELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 135
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 242
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 243 SRL------LKHNPSQRPMLREVLEH 262
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG 354
+G +G V VA+K ++E + + EF E ++ + H L+ L Y +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL--YGVC 79
Query: 355 PKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
K + + +YM +G L +L R +++ K + + +L S + +H +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 136
Query: 414 LTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVY 473
L + N L++D K+SDFGLSR + + + PE+ K ++K+D++
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 474 SLGVTILELLT-GKSPGEPLNGAELPQWVA 502
+ GV + E+ + GK P E +E + +A
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 226
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQR---EFESEVSLLGKIRHPNLLAL 348
EI+G V+ A L VAVK LR + + F E + HP ++A+
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 349 RAYYLG----PKGE-KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
Y G P G +V +Y+ +L +H GP TP +++I + L
Sbjct: 78 --YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFS 132
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX--XLGYRAPELS 461
H N IIH ++ +N+++ + K+ DFG++R + Y +PE +
Sbjct: 133 HQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + ++DVYSLG + E+LTG+ P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 47/255 (18%)
Query: 275 HFDGPLMFTADDLLCATAEIMGKSTYGTVYKATLEDGSQV-AVKRLREKI-TKGQREFES 332
H+D FTA+DL EI G+ YG+V K + Q+ AVKR+R + K Q++
Sbjct: 16 HWD----FTAEDLK-DLGEI-GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLM 69
Query: 333 EVSLLGKIRHPNLLALRAYY--LGPKGEKLLVFDYMP------HGSLATFLHARGPETPI 384
++ ++ +R + + +Y L +G+ + + M + + + L PE +
Sbjct: 70 DLDVV--MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEIL 127
Query: 385 DWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXX 444
KI + L HL N IIH ++ SN+LLD S N K+ DFG+S +
Sbjct: 128 G-----KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182
Query: 445 XXXXXXXXLGYRAPEL----SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQW 500
Y APE + + + ++DV+SLG+T+ EL TG+ P P+W
Sbjct: 183 TRDAGCRP--YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP--------YPKW 232
Query: 501 VASIVKEEWTNEVFD 515
N VFD
Sbjct: 233 ----------NSVFD 237
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E++G TYG VYK Q+A ++ + + E + E+++L K H +A Y
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA--TY 86
Query: 352 Y--------LGPKGEKLLVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLH 402
Y G + LV ++ GS+ + + +G +W I + + RGL H
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSH 144
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK 462
LH ++ +IH ++ NVLL ++ K+ DFG+S + + APE+
Sbjct: 145 LHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPY-WMAPEVIA 202
Query: 463 LKK-----ANTKTDVYSLGVTILELLTGKSP 488
+ + K+D++SLG+T +E+ G P
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+++G ++G V++A L + +VA+K K+ + +R E+ ++ ++HPN++ L+A+
Sbjct: 45 CKVIGNGSFGVVFQAKLVESDEVAIK----KVLQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 352 YL--GPKGEKL---LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK----GMTRGLLH 402
+ G K +++ LV +Y+P T A + M +IK + R L +
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNA-KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL- 460
+HS I H ++ N+LLD + K+ DFG ++++ YRAPEL
Sbjct: 157 IHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--YRAPELI 213
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKS--PGE 490
T D++S G + EL+ G+ PGE
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 102 YFHD-ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 156
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 263
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 264 SRL------LKHNPSQRPMLREVLEH 283
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 240
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 241 SRL------LKHNPSQRPMLREVLEH 260
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G + L + D I + L + HS + +I
Sbjct: 81 YF-HDATRVYLILEYAPRGEVYKELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 135
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 242
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 243 SRL------LKHNPSQRPMLREVLEH 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 93 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 254
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 255 SRL------LKHNPSQRPMLREVLEH 274
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 26/267 (9%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLRE---KITKGQREFESEVSLLGKIRHPNLLALRA 350
+G+ + VY+A L DG VA+K+++ K + + E+ LL ++ HPN++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
++ E +V + G L+ + H + + I T K + L H+HS +
Sbjct: 100 SFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-V 157
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ +NV + + K+ D GL R Y +PE N K
Sbjct: 158 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY-YMSPERIHENGYNFK 216
Query: 470 TDVYSLGVTILELLTGKSP--GEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527
+D++SLG + E+ +SP G+ +N + S+ K+ +E P D
Sbjct: 217 SDIWSLGCLLYEMAALQSPFYGDKMN-------LYSLCKK--------IEQCDYPPLPSD 261
Query: 528 ELLNTLK-LALHCVDPSPSARPEVLQV 553
L+ L C++P P RP+V V
Sbjct: 262 HYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 81 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 135
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 242
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 243 SRL------LKHNPSQRPMLREVLEH 262
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQR---EFESEVSLLGKIRHPNLLAL 348
EI+G V+ A L VAVK LR + + F E + HP ++A+
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 349 RAYYLG----PKGE-KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
Y G P G +V +Y+ +L +H GP TP +++I + L
Sbjct: 78 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFS 132
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX--XLGYRAPELS 461
H N IIH ++ +N+++ + K+ DFG++R + Y +PE +
Sbjct: 133 HQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + ++DVYSLG + E+LTG+ P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQ----VAVKRLREKITKGQREFES---EVSLLGKIRHPN 344
+++G +GTV+K + +G V +K + +K G++ F++ + +G + H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSLDHAH 76
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLH----ARGPETPIDWPTRMKIIKGMTRGL 400
++ L L P LV Y+P GSL + A GP+ ++W ++I KGM
Sbjct: 77 IVRLLG--LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW--GVQIAKGM---- 128
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLM-XXXXXXXXXXXXXXLGYRAPE 459
+ ++H NL + NVLL + +++DFG++ L+ + + A E
Sbjct: 129 -YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELP 498
K ++DV+S GVT+ EL+T G P L AE+P
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP 227
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 288 LCATAEIMGKSTYGTVYKATL--EDGS--QVAVKRLREKITKGQREFE---SEVSLLGKI 340
L +I+G+ +G+V + L EDG+ +VAVK ++ QRE E SE + +
Sbjct: 35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD-NSSQREIEEFLSEAACMKDF 93
Query: 341 RHPNLLALRAYYLGPKGE----KLLVFDYMPHGSLATFL-HARGPETPIDWP--TRMKII 393
HPN++ L + + +++ +M +G L T+L ++R P P T +K +
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 394 KGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLS-RLMXXXXXXXXXXXXXX 452
+ G+ +L SN N +H +L + N +L D ++DFGLS ++
Sbjct: 154 VDIALGMEYL-SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 453 LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSP 488
+ + A E + +K+DV++ GVT+ E+ T G +P
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 77 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 238
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 239 SRL------LKHNPSQRPMLREVLEH 258
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 240
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 241 SRL------LKHNPSQRPMLREVLEH 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 102 YFHD-ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 156
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 213
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 263
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 264 SRL------LKHNPSQRPMLREVLEH 283
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQ----VAVKRLREKITKGQREFES---EVSLLGKIRHPN 344
+++G +GTV+K + +G V +K + +K G++ F++ + +G + H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSLDHAH 94
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLH----ARGPETPIDWPTRMKIIKGMTRGL 400
++ L L P LV Y+P GSL + A GP+ ++W ++I KGM
Sbjct: 95 IVRLLG--LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW--GVQIAKGM---- 146
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLM-XXXXXXXXXXXXXXLGYRAPE 459
+ ++H NL + NVLL + +++DFG++ L+ + + A E
Sbjct: 147 -YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 460 LSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELP 498
K ++DV+S GVT+ EL+T G P L AE+P
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP 245
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 77 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 188
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 238
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 239 SRL------LKHNPSQRPMLREVLEH 258
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 77 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 131
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 238
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 239 SRL------LKHNPSQRPMLREVLEH 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 78 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 132
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 189
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 239
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 240 SRL------LKHNPSQRPMLREVLEH 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 81 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 135
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 242
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 243 SRL------LKHNPSQRPMLREVLEH 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 130
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 237
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 238 SRL------LKHNPSQRPMLREVLEH 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 130
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 237
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 238 SRL------LKHNPSQRPMLREVLEH 257
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 26/287 (9%)
Query: 277 DGPLMFTADDL--LCATAEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQR-EFES 332
+GP A+D+ + +++G + V A + + VA+K + +K +G+ E+
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN 65
Query: 333 EVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
E+++L KI+HPN++AL Y G L+ + G L + +G T D ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASRL 121
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVL---LDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
I + + +LH + I+H +L N+L LD+ + ISDFGLS++
Sbjct: 122 IFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW 509
GY APE+ K + D +S+GV LL G P N A+L
Sbjct: 181 TP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL------------ 226
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556
++ E D+P D + H ++ P R Q +Q
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 81 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 135
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 242
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 243 SRL------LKHNPSQRPXLREVLEH 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 80 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 134
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 241
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 242 SRL------LKHNPSQRPMLREVLEH 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 130
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 237
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 238 SRL------LKHNPSQRPMLREVLEH 257
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQR---EFESEVSLLGKIRHPNLLAL 348
EI+G V+ A L VAVK LR + + F E + HP ++A+
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 349 RAYYLG----PKGE-KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
Y G P G +V +Y+ +L +H GP TP +++I + L
Sbjct: 95 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFS 149
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX--XLGYRAPELS 461
H N IIH ++ +N+++ + K+ DFG++R + Y +PE +
Sbjct: 150 HQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + ++DVYSLG + E+LTG+ P
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 108/233 (46%), Gaps = 40/233 (17%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLL 346
++GK ++G V K T G + AVK + ++ K + + ES EV LL ++ HPN+
Sbjct: 33 VLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L ++ KG LV + G L + +R + +D +II+ + G+ + H N
Sbjct: 90 KLYEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYXHKN 145
Query: 407 ENIIHGNLTSSNVLLDDST---NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
+ I+H +L N+LL+ + N +I DFGLS Y APE+
Sbjct: 146 K-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAY--YIAPEVLH- 201
Query: 464 KKANTKTDVYSLGVTILELLTGKSPGEPLNGA----------------ELPQW 500
+ K DV+S GV + LL+G P P NGA ELPQW
Sbjct: 202 GTYDEKCDVWSTGVILYILLSG-CP--PFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 130
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 237
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 238 SRL------LKHNPSQRPMLREVLEH 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A ++ + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 76 YF-HDSTRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSKK-VI 130
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVYSLGVTILELLTGKSPGE 490
D++SLGV E L GK P E
Sbjct: 188 DLWSLGVLCYEFLVGKPPFE 207
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 117/277 (42%), Gaps = 32/277 (11%)
Query: 282 FTADDLLCATAEIMGKSTYGTVYKATLEDGSQ--VAVKRL-REKITKG--QREFESEVSL 336
FT DD +GK +G VY A E S VA+K L + +I K + + E+ +
Sbjct: 20 FTIDDF--EIGRPLGKGKFGNVYLAR-EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 337 LGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGM 396
+ HPN+L L Y+ + L+ +Y P G L L D I++ +
Sbjct: 77 QAHLHHPNILRLYNYFYD-RRRIYLILEYAPRGELYKELQK---SCTFDEQRTATIMEEL 132
Query: 397 TRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR 456
L++ H + +IH ++ N+LL KI+DFG S L Y
Sbjct: 133 ADALMYCHGKK-VIHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYL 188
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL 516
PE+ + + N K D++ +GV ELL G P E + E + + + DL
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV----------DL 238
Query: 517 ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQV 553
+ PT +L++ KL H +PS R + QV
Sbjct: 239 KFPASVPTGAQDLIS--KLLRH----NPSERLPLAQV 269
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 75 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 129
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 236
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 237 SRL------LKHNPSQRPMLREVLEH 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 240
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 241 SRL------LKHNPSQRPMLREVLEH 260
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 81 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 131
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 82 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 132
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 133 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 240
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 241 SRL------LKHNPSQRPMLREVLEH 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 130
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 237
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 238 SRL------LKHNPSQRPMLREVLEH 257
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 84 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 134
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 135 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP--AFVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 288 LCATAEIMGKSTYGTVYKATLEDGSQ--VAVKRLR-EKITKGQREFESEVSLLGKIRHPN 344
L E +GK ++G V+K +++ +Q VA+K + E+ + + E+++L + P
Sbjct: 23 LFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 345 LLALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ YL K KL ++ +Y+ GS L P+D I++ + +GL +L
Sbjct: 82 VTKYYGSYL--KDTKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYL 135
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS E IH ++ ++NVLL + K++DFG++ + + APE+ K
Sbjct: 136 HS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQ 193
Query: 464 KKANTKTDVYSLGVTILELLTGKSPGEPLN 493
++K D++SLG+T +EL G+ P L+
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELH 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 85 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 135
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 136 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 83 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 133
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 240
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 241 SRL------LKHNPSQRPMLREVLEH 260
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 284 ADDLLCATAEIMGKSTYGTVYKA-TLEDGSQ-VAVKRLREKITKGQREFES--EVSLLGK 339
AD AEI G+ YG V+KA L++G + VA+KR+R + + + EV++L
Sbjct: 9 ADQQYECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 340 IR---HPNLLALRAYYLGPKGEK----LLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
+ HPN++ L + ++ LVF+++ L T+L + PE + T +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLD-KVPEPGVPTETIKDM 125
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX 452
+ + RGL LHS+ ++H +L N+L+ S K++DFGL+R+
Sbjct: 126 MFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVT 182
Query: 453 LGYRAPELSKLKKANTKTDVYSLGVTILELLTGK 486
L YRAPE+ T D++S+G E+ K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
++G+ +G V+ KAT + + + + R K KG + E +L K+ H +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETP-IDWPTRMKIIKGMTRGLLHLHSNEN 408
AY K + LV M G + ++ + P P + + GL HLH N
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-N 309
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L NVLLDD N +ISD GL+ + G+ APEL ++ +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-GFMAPELLLGEEYDF 368
Query: 469 KTDVYSLGVTILELLTGKSP----GEPLNGAELPQWV 501
D ++LGVT+ E++ + P GE + EL Q V
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
++G+ +G V+ KAT + + + + R K KG + E +L K+ H +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETP-IDWPTRMKIIKGMTRGLLHLHSNEN 408
AY K + LV M G + ++ + P P + + GL HLH N
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-N 309
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L NVLLDD N +ISD GL+ + G+ APEL ++ +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-GFMAPELLLGEEYDF 368
Query: 469 KTDVYSLGVTILELLTGKSP----GEPLNGAELPQWV 501
D ++LGVT+ E++ + P GE + EL Q V
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 21/213 (9%)
Query: 293 EIMGK-STYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLAL 348
EI+G+ +G VYKA ++ S +A ++ + TK + E E E+ +L HPN++ L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 349 -RAYYLGPKGEKLLVFDYMPHGSL-ATFLHARGPETPIDWPTRMKII-KGMTRGLLHLHS 405
A+Y + ++ ++ G++ A L P T ++++++ K L +LH
Sbjct: 73 LDAFYY--ENNLWILIEFCAGGAVDAVMLELERPLTE----SQIQVVCKQTLDALNYLHD 126
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL----- 460
N+ IIH +L + N+L + K++DFG+S + APE+
Sbjct: 127 NK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSPGEPLN 493
SK + + K DV+SLG+T++E+ + P LN
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 218
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
++G+ +G V+ KAT + + + + R K KG + E +L K+ H +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETP-IDWPTRMKIIKGMTRGLLHLHSNEN 408
AY K + LV M G + ++ + P P + + GL HLH N
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-N 309
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L NVLLDD N +ISD GL+ + G+ APEL ++ +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-GFMAPELLLGEEYDF 368
Query: 469 KTDVYSLGVTILELLTGKSP----GEPLNGAELPQWV 501
D ++LGVT+ E++ + P GE + EL Q V
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
++G+ +G V+ KAT + + + + R K KG + E +L K+ H +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETP-IDWPTRMKIIKGMTRGLLHLHSNEN 408
AY K + LV M G + ++ + P P + + GL HLH N
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-N 309
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L NVLLDD N +ISD GL+ + G+ APEL ++ +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-GFMAPELLLGEEYDF 368
Query: 469 KTDVYSLGVTILELLTGKSP----GEPLNGAELPQWV 501
D ++LGVT+ E++ + P GE + EL Q V
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 294 IMGKSTYGTVYKATLED-GSQVAVKRLRE----KITKGQREFESEVSLLGKIRHPNLLAL 348
++G+ +YG V K +D G VA+K+ E K+ K + E+ LL ++RH NL+ L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK--KIAMREIKLLKQLRHENLVNL 89
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATF-LHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
K LVF+++ H L L G + + +II G+ G H H
Sbjct: 90 LEV-CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI--GFCHSH--- 143
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL----SKL 463
NIIH ++ N+L+ S K+ DFG +R + YRAPEL K
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW-YRAPELLVGDVKY 202
Query: 464 KKANTKTDVYSLGVTILELLTGK--SPGE 490
KA DV+++G + E+ G+ PG+
Sbjct: 203 GKA---VDVWAIGCLVTEMFMGEPLFPGD 228
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 13/210 (6%)
Query: 288 LCATAEIMGKSTYGTVYKATLEDGSQ--VAVKRLR-EKITKGQREFESEVSLLGKIRHPN 344
L E +GK ++G V+K +++ +Q VA+K + E+ + + E+++L + P
Sbjct: 28 LFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 345 LLALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ YL K KL ++ +Y+ GS L P+D I++ + +GL +L
Sbjct: 87 VTKYYGSYL--KDTKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYL 140
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS E IH ++ ++NVLL + K++DFG++ + + APE+ K
Sbjct: 141 HS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIKQ 198
Query: 464 KKANTKTDVYSLGVTILELLTGKSPGEPLN 493
++K D++SLG+T +EL G+ P L+
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELH 228
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 82 RLLGICLTSTVQ--LIMQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 132
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 133 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 74 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 129
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 130 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 186
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 73 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 127
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 234
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 235 SRL------LKHNPSQRPMLREVLEH 254
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 286 DLLCATAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLG 338
D T E +G + V K + G Q A K ++++ TK R + E EVS+L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 339 KIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTR 398
+I+HPN++ L Y K + +L+ + + G L FL + T + +K +
Sbjct: 70 EIQHPNVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILN 125
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLG 454
G+ +LHS + I H +L N++L D KI DFGL+ +
Sbjct: 126 GVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE-- 182
Query: 455 YRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ APE+ + + D++S+GV LL+G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 13/210 (6%)
Query: 288 LCATAEIMGKSTYGTVYKATLEDGSQ--VAVKRLR-EKITKGQREFESEVSLLGKIRHPN 344
L E +GK ++G V+K +++ +Q VA+K + E+ + + E+++L + P
Sbjct: 8 LFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 345 LLALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ YL K KL ++ +Y+ GS L P+D I++ + +GL +L
Sbjct: 67 VTKYYGSYL--KDTKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYL 120
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS E IH ++ ++NVLL + K++DFG++ + + APE+ K
Sbjct: 121 HS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIKQ 178
Query: 464 KKANTKTDVYSLGVTILELLTGKSPGEPLN 493
++K D++SLG+T +EL G+ P L+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELH 208
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 288 LCATAEIMGKSTYGTVYKATLEDGSQ--VAVKRLR-EKITKGQREFESEVSLLGKIRHPN 344
L E +GK ++G V+K +++ +Q VA+K + E+ + + E+++L + P
Sbjct: 8 LFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 345 LLALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ YL K KL ++ +Y+ GS L P+D I++ + +GL +L
Sbjct: 67 VTKYYGSYL--KDTKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYL 120
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS E IH ++ ++NVLL + K++DFG++ + + APE+ K
Sbjct: 121 HS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQ 178
Query: 464 KKANTKTDVYSLGVTILELLTGKSPGEPLN 493
++K D++SLG+T +EL G+ P L+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELH 208
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 74 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 129
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 130 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 186
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 284 ADDLLCATAEIMGKSTYGTVYKA-TLEDGSQ-VAVKRLREKITKGQREFES--EVSLLGK 339
AD AEI G+ YG V+KA L++G + VA+KR+R + + + EV++L
Sbjct: 9 ADQQYECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 340 IR---HPNLLALRAYYLGPKGEK----LLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
+ HPN++ L + ++ LVF+++ L T+L + PE + T +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLD-KVPEPGVPTETIKDM 125
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX 452
+ + RGL LHS+ ++H +L N+L+ S K++DFGL+R+
Sbjct: 126 MFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVT 182
Query: 453 LGYRAPELSKLKKANTKTDVYSLGVTILELLTGK 486
L YRAPE+ T D++S+G E+ K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 284 ADDLLCATAEIMGKSTYGTVYKAT-LEDGSQ-VAVKRLREKITKGQREFES--EVSLLGK 339
AD AEI G+ YG V+KA L++G + VA+KR+R + + + EV++L
Sbjct: 9 ADQQYECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 340 IR---HPNLLALRAYYLGPKGEK----LLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
+ HPN++ L + ++ LVF+++ L T+L + PE + T +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLD-KVPEPGVPTETIKDM 125
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX 452
+ + RGL LHS+ ++H +L N+L+ S K++DFGL+R+
Sbjct: 126 MFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVT 182
Query: 453 LGYRAPELSKLKKANTKTDVYSLGVTILELLTGK 486
L YRAPE+ T D++S+G E+ K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 26/287 (9%)
Query: 277 DGPLMFTADDL--LCATAEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQR-EFES 332
+GP A+D+ + +++G + V A + + VA+K + ++ +G+ E+
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 333 EVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
E+++L KI+HPN++AL Y G L+ + G L + +G T D ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASRL 121
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVL---LDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
I + + +LH + I+H +L N+L LD+ + ISDFGLS++
Sbjct: 122 IFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW 509
GY APE+ K + D +S+GV LL G P N A+L +
Sbjct: 181 TP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFE---------- 228
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556
++ E D+P D + H ++ P R Q +Q
Sbjct: 229 --QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 88 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 138
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 139 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 78 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 132
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI++FG S L Y PE+ + + + K
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 239
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 240 SRL------LKHNPSQRPMLREVLEH 259
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 75 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 125
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 126 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 87 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 137
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 138 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 131
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 26/287 (9%)
Query: 277 DGPLMFTADDL--LCATAEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQR-EFES 332
+GP A+D+ + +++G + V A + + VA+K + ++ +G+ E+
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 333 EVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
E+++L KI+HPN++AL Y G L+ + G L + +G T D ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASRL 121
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVL---LDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
I + + +LH + I+H +L N+L LD+ + ISDFGLS++
Sbjct: 122 IFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW 509
GY APE+ K + D +S+GV LL G P N A+L I+K E+
Sbjct: 181 TP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL---FEQILKAEY 235
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556
D+P D + H ++ P R Q +Q
Sbjct: 236 E---------FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 131
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 84 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 134
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 135 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 26/287 (9%)
Query: 277 DGPLMFTADDL--LCATAEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQR-EFES 332
+GP A+D+ + +++G + V A + + VA+K + ++ +G+ E+
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 333 EVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
E+++L KI+HPN++AL Y G L+ + G L + +G T D ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASRL 121
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVL---LDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
I + + +LH + I+H +L N+L LD+ + ISDFGLS++
Sbjct: 122 IFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW 509
GY APE+ K + D +S+GV LL G P N A+L +
Sbjct: 181 TP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFE---------- 228
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556
++ E D+P D + H ++ P R Q +Q
Sbjct: 229 --QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 84 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 134
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 135 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 84 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 134
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 135 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 83 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 133
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 91 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 141
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 142 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRL-REKIT------KGQREFESEVSLLGKIRHP 343
+ +G T+G V E G +VAVK L R+KI K +RE ++ L RHP
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN----LKLFRHP 76
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+++ L P + +V +Y+ G L ++ G +D ++ + + G+ +
Sbjct: 77 HIIKLYQVISTP-SDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYC 132
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSK 462
H + ++H +L NVLLD NAKI+DFGLS +M Y APE +S
Sbjct: 133 HRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSP--NYAAPEVISG 189
Query: 463 LKKANTKTDVYSLGVTILELLTGKSP 488
A + D++S GV + LL G P
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 106 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 156
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 157 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 42/288 (14%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 40 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 96
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPE-TPIDWPTRM---------------K 391
L P G +++ ++ G+L+T+L ++ E P P + +
Sbjct: 97 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQ 156
Query: 392 IIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
+ KGM ++ IH +L + N+LL + KI DFGL+R +
Sbjct: 157 VAKGM-----EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEW 509
L + APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEF 260
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 291 TAEIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE----SEVSLLGKIR---H 342
AEI G YGTVYKA G VA+K +R + G+ EV+LL ++ H
Sbjct: 9 VAEI-GVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 343 PNLLALRAYYLGPKGEK----LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTR 398
PN++ L + ++ LVF+++ L T+L + P + T +++ R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD-KAPPPGLPAETIKDLMRQFLR 123
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAP 458
GL LH+N I+H +L N+L+ K++DFGL+R+ L YRAP
Sbjct: 124 GLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYRAP 180
Query: 459 ELSKLKKANTKTDVYSLGVTILELLTGK 486
E+ T D++S+G E+ K
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLALRA 350
E +G+ TYG VYKA G A+K++R EK +G E+S+L +++H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ K +LVF+++ L L E ++ T + + G+ + H + ++
Sbjct: 68 -VIHTKKRLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCH-DRRVL 122
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKANTK 469
H +L N+L++ KI+DFGL+R L YRAP+ L KK +T
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 470 TDVYSLGVTILELLTG 485
D++S+G E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLALRA 350
E +G+ TYG VYKA G A+K++R EK +G E+S+L +++H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ K +LVF+++ L L E ++ T + + G+ + H + ++
Sbjct: 68 -VIHTKKRLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCH-DRRVL 122
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKANTK 469
H +L N+L++ KI+DFGL+R L YRAP+ L KK +T
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 470 TDVYSLGVTILELLTG 485
D++S+G E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 131
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVI 133
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI++FG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELL 530
D++SLGV E L GK P E E + ++ + E+T F E RD L+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD-------LI 240
Query: 531 NTLKLALHCVDPSPSARPEVLQVVQQ 556
+ L + +PS RP + +V++
Sbjct: 241 SRL------LKHNPSQRPMLREVLEH 260
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLR-EKITKGQREFE-SEVSLLGKIRHPNLLALRA 350
E +G+ TYG VYKA G A+K++R EK +G E+S+L +++H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ K +LVF+++ L L E ++ T + + G+ + H + ++
Sbjct: 68 -VIHTKKRLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCH-DRRVL 122
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKANTK 469
H +L N+L++ KI+DFGL+R L YRAP+ L KK +T
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181
Query: 470 TDVYSLGVTILELLTG 485
D++S+G E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 27/213 (12%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLAL-RA 350
+G +G VYKA ++ S +A ++ + TK + E E E+ +L HPN++ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 351 YYLGPKGEKLLVFDYMPHGSL-ATFLHARGPETPIDWPTRMKII-KGMTRGLLHLHSNEN 408
+Y + ++ ++ G++ A L P T ++++++ K L +LH N+
Sbjct: 103 FYY--ENNLWILIEFCAGGAVDAVMLELERPLTE----SQIQVVCKQTLDALNYLHDNK- 155
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL----- 460
IIH +L + N+L + K++DFG+S +G + APE+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSPGEPLN 493
SK + + K DV+SLG+T++E+ + P LN
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLAL-RA 350
+G +G VYKA ++ S +A ++ + TK + E E E+ +L HPN++ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 351 YYLGPKGEKLLVFDYMPHGSL-ATFLHARGPETPIDWPTRMKII-KGMTRGLLHLHSNEN 408
+Y + ++ ++ G++ A L P T ++++++ K L +LH N+
Sbjct: 103 FYY--ENNLWILIEFCAGGAVDAVMLELERPLTE----SQIQVVCKQTLDALNYLHDNK- 155
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL----- 460
IIH +L + N+L + K++DFG+S +G + APE+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSPGEPLN 493
SK + + K DV+SLG+T++E+ + P LN
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 291 TAEIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE----SEVSLLGKIR---H 342
AEI G YGTVYKA G VA+K +R + G+ EV+LL ++ H
Sbjct: 9 VAEI-GVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 343 PNLLALRAYYLGPKGEK----LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTR 398
PN++ L + ++ LVF+++ L T+L + P + T +++ R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD-KAPPPGLPAETIKDLMRQFLR 123
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAP 458
GL LH+N I+H +L N+L+ K++DFGL+R+ L YRAP
Sbjct: 124 GLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTLWYRAP 180
Query: 459 ELSKLKKANTKTDVYSLGVTILELLTGK 486
E+ T D++S+G E+ K
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 291 TAEIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFE----SEVSLLGKIR---H 342
AEI G YGTVYKA G VA+K +R + G+ EV+LL ++ H
Sbjct: 9 VAEI-GVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 343 PNLLALRAYYLGPKGEK----LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTR 398
PN++ L + ++ LVF+++ L T+L + P + T +++ R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD-KAPPPGLPAETIKDLMRQFLR 123
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAP 458
GL LH+N I+H +L N+L+ K++DFGL+R+ L YRAP
Sbjct: 124 GLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLWYRAP 180
Query: 459 ELSKLKKANTKTDVYSLGVTILELLTGK 486
E+ T D++S+G E+ K
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVY---KATLEDGSQVAVKRLREKITKGQRE---FESEVSLLGKIRHPNLL 346
+++G+ ++G V+ K T D + ++ +K T R+ + E +L + HP ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y +G+ L+ D++ G L T L T D + + GL HLHS
Sbjct: 94 KLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALGLDHLHSL 149
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
II+ +L N+LLD+ + K++DFGLS+ + Y APE+ +
Sbjct: 150 -GIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
+ D +S GV + E+LTG P
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLP 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 311 GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHG 369
G AVK + +K KG+ E+E+++L KI+H N++AL Y P LV + G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP-NHLYLVMQLVSGG 105
Query: 370 SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTN 426
L + +G T D T +I+ + + +LH I+H +L N+L D+ +
Sbjct: 106 ELFDRIVEKGFYTEKDAST---LIRQVLDAVYYLH-RMGIVHRDLKPENLLYYSQDEESK 161
Query: 427 AKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGK 486
ISDFGLS++ GY APE+ K + D +S+GV LL G
Sbjct: 162 IMISDFGLSKMEGKGDVMSTACGTP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 219
Query: 487 SPGEPLNGAEL 497
P N ++L
Sbjct: 220 PPFYDENDSKL 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 27/213 (12%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLAL-RA 350
+G +G VYKA ++ S +A ++ + TK + E E E+ +L HPN++ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 351 YYLGPKGEKLLVFDYMPHGSL-ATFLHARGPETPIDWPTRMKII-KGMTRGLLHLHSNEN 408
+Y + ++ ++ G++ A L P T ++++++ K L +LH N+
Sbjct: 103 FYY--ENNLWILIEFCAGGAVDAVMLELERPLTE----SQIQVVCKQTLDALNYLHDNK- 155
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL----- 460
IIH +L + N+L + K++DFG+S +G + APE+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSPGEPLN 493
SK + + K DV+SLG+T++E+ + P LN
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 291 TAEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHP 343
T E +G + V K + G Q A K ++++ TK R + E EVS+L +I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 344 NLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
N++ L Y K + +L+ + + G L FL + T + +K + G+ +L
Sbjct: 75 NVITLHEVYEN-KTDVILIGELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYYL 130
Query: 404 HSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE 459
HS + I H +L N++L D KI DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + + D++S+GV LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 85 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 135
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFG ++L+ + + A E
Sbjct: 136 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 295 MGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ + G V AT + G QVAVK++ + + + +EV ++ H N++ + + YL
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 354 GPKGEKL-LVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
G++L +V +++ G+L + H R E I + + R L +LH N+ +IH
Sbjct: 113 --VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLH-NQGVIH 164
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S ++LL K+SDFG + + APE+ T+ D
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPY-WMAPEVISRLPYGTEVD 223
Query: 472 VYSLGVTILELLTGKSP 488
++SLG+ ++E++ G+ P
Sbjct: 224 IWSLGIMVIEMIDGEPP 240
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF--ESEVSLLGKIRHPNLLAL-- 348
E++G+ YG VYK +L D VAVK ++ F E + + + H N+
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFS---FANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 349 ---RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
R G + E LLV +Y P+GSL +L DW + ++ +TRGL +LH+
Sbjct: 75 GDERVTADG-RMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHT 129
Query: 406 N--------ENIIHGNLTSSNVLLDDSTNAKISDFGLS------RLMX-XXXXXXXXXXX 450
I H +L S NVL+ + ISDFGLS RL+
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 451 XXLGYRAPE-------LSKLKKANTKTDVYSLGVTILELL---TGKSPGEPL 492
+ Y APE L + A + D+Y+LG+ E+ T PGE +
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I +GM +
Sbjct: 78 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAEGM-----N 128
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 129 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 225
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLRE--KITKGQREFESEVSLLGKIRHPNLLALRAYY 352
+GK ++G VYK +V ++ + + + + E+++L + P + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 353 LGPKGEKL-LVFDYMPHGSLATFLHARGP--ETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
L K KL ++ +Y+ GS L GP ET I I++ + +GL +LHS E
Sbjct: 87 L--KSTKLWIIMEYLGGGSALDLLKP-GPLEETYI-----ATILREILKGLDYLHS-ERK 137
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
IH ++ ++NVLL + + K++DFG++ + + APE+ K + K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQSAYDFK 196
Query: 470 TDVYSLGVTILELLTGKSPGEPLN 493
D++SLG+T +EL G+ P L+
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLH 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++ +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 88 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 138
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 139 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 83 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 133
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFG ++L+ + + A E
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 83 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 133
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFG ++L+ + + A E
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 34/282 (12%)
Query: 295 MGKSTYGTVYKA------TLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLL 346
+G+ +G V +A VAVK L+E T + R SE+ +L I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPE-TPI-----DWPTRMKIIK---GMT 397
L P G +++ ++ G+L+T+L ++ E P D+ T +I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYR 456
+G+ L S + I H +L + N+LL + KI DFGL+R + L +
Sbjct: 155 KGMEFLASRKXI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 457 APELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFD 515
APE + ++DV+S GV + E+ + G SP + + EE+ + +
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRRLKE 262
Query: 516 LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
MR E+ T+ L C PS RP ++V+ L
Sbjct: 263 GTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 311 GSQVAVKRLR-EKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL-LVFDYMPH 368
G QVAVK L+ E + + E+ +L + H N++ + G + L+ +++P
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAK 428
GSL +L + I+ ++K + +G+ +L S + +H +L + NVL++ K
Sbjct: 110 GSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVK 166
Query: 429 ISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
I DFGL++ + + + APE K +DV+S GVT+ ELLT
Sbjct: 167 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 295 MGKSTYGTVYKA------TLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLL 346
+G+ +G V +A VAVK L+E T + R SE+ +L I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARG----PETPIDW-----------PTRMK 391
L P G +++ ++ G+L+T+L ++ P P D +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 392 IIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
+ KGM ++ IH +L + N+LL + KI DFGL+R +
Sbjct: 157 VAKGM-----EFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEW 509
L + APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEF 260
Query: 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 311 GSQVAVKRLR-EKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL-LVFDYMPH 368
G QVAVK L+ E + + E+ +L + H N++ + G + L+ +++P
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAK 428
GSL +L + I+ ++K + +G+ +L S + +H +L + NVL++ K
Sbjct: 98 GSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVK 154
Query: 429 ISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
I DFGL++ + + + APE K +DV+S GVT+ ELLT
Sbjct: 155 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKG---QREFESEVSLLGKIRHPNLLAL 348
E +G+ ++G V AT Q VA+K + ++ K E E+S L +RHP+++ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 349 RAYYLGPKGEKLLV-------FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLL 401
P +++ FDY+ T R + + + +
Sbjct: 75 YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGR------------RFFQQIICAIE 122
Query: 402 HLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS 461
+ H ++ I+H +L N+LLDD+ N KI+DFGLS +M Y APE+
Sbjct: 123 YCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVI 179
Query: 462 KLK-KANTKTDVYSLGVTILELLTGKSP 488
K A + DV+S G+ + +L G+ P
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 289 CATAEIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLA 347
+ EI+G +G V+K G ++A K ++ + K + E ++E+S++ ++ H NL+
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLAT-FLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L + K + +LV +Y+ G L + T +D + +K + G+ H+H
Sbjct: 151 LYDAF-ESKNDIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMHQM 206
Query: 407 ENIIHGNLTSSNVLL--DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 464
I+H +L N+L D+ KI DFGL+R + APE+
Sbjct: 207 -YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPE--FLAPEVVNYD 263
Query: 465 KANTKTDVYSLGVTILELLTGKSPGEPLNGAE 496
+ TD++S+GV LL+G SP N AE
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE 295
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 41 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARG------PETPIDW-----------PTRM 390
L P G +++ ++ G+L+T+L ++ E P D
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF 157
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXX 449
++ KGM ++ IH +L + N+LL + KI DFGL+R +
Sbjct: 158 QVAKGM-----EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEE 508
L + APE + ++DV+S GV + E+ + G SP + + EE
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEE 261
Query: 509 WTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + + MR E+ T+ L C PS RP ++V+ L
Sbjct: 262 FCRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 307
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 34/282 (12%)
Query: 295 MGKSTYGTVYKA------TLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLL 346
+G+ +G V +A VAVK L+E T + R SE+ +L I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPE-TPI-----DWPTRMKIIK---GMT 397
L P G +++ ++ G+L+T+L ++ E P D+ T +I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYR 456
+G+ L S + I H +L + N+LL + KI DFGL+R + L +
Sbjct: 155 KGMEFLASRKXI-HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 457 APELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFD 515
APE + ++DV+S GV + E+ + G SP + + EE+ + +
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFXRRLKE 262
Query: 516 LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
MR E+ T+ L C PS RP ++V+ L
Sbjct: 263 GTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 39 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR---------GPETPI-DWPTRMKIIK--- 394
L P G +++ ++ G+L+T+L ++ PE D+ T +I
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ +G+ L S + IH +L + N+LL + KI DFGL+R + L
Sbjct: 156 QVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512
+ APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRR 263
Query: 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 52/282 (18%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLALR-A 350
+G +G VYKA ++ +A ++ E TK + E E E+ +L HP ++ L A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHA--RGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
YY G+ ++ ++ P G++ + RG + P + + M L LHS
Sbjct: 85 YY--HDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSK-R 137
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPELSKLKK 465
IIH +L + NVL+ + +++DFG+S +G + APE+ +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 466 A-----NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS------IVKEEWTNEVF 514
+ K D++SLG+T++E+ + P LN + +A + +W+ E
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFR 253
Query: 515 DLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556
D LK+AL D +P RP Q+++
Sbjct: 254 DF----------------LKIAL---DKNPETRPSAAQLLEH 276
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 35/285 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 39 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR---------GPETPI-DWPTRMKIIK--- 394
L P G +++ ++ G+L+T+L ++ PE D+ T +I
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ +G+ L S + IH +L + N+LL + KI DFGL+R + L
Sbjct: 156 QVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512
+ APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRR 263
Query: 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 35/285 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 39 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR---------GPETPI-DWPTRMKIIK--- 394
L P G +++ ++ G+L+T+L ++ PE D+ T +I
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ +G+ L S + IH +L + N+LL + KI DFGL+R + L
Sbjct: 156 QVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512
+ APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRR 263
Query: 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ-VAVKRL----REKITKG-QREFESEVSLLGKIRHPNLL 346
+ +G+ + TVYKA ++ +Q VA+K++ R + G R E+ LL ++ HPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMT-RGLLHLHS 405
L + G K LVFD+M L + + + P+ +K MT +GL +LH
Sbjct: 76 GLLDAF-GHKSNISLVFDFM-ETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLK 464
+ I+H +L +N+LLD++ K++DFGL++ YRAPE L +
Sbjct: 131 HW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW-YRAPELLFGAR 188
Query: 465 KANTKTDVYSLGVTILELL 483
D++++G + ELL
Sbjct: 189 MYGVGVDMWAVGCILAELL 207
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 125/295 (42%), Gaps = 45/295 (15%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQ-REFESEVSLLGKIRHPNLLA 347
+G+ +G V KAT + VAVK L+E + + R+ SE ++L ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETP-------------IDWPTRMKIIK 394
L G LL+ +Y +GSL FL P +D P +
Sbjct: 91 LYGA-CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 395 G--------MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXX 445
G +++G+ +L + +++H +L + N+L+ + KISDFGLSR +
Sbjct: 150 GDLISFAWQISQGMQYL-AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 446 XXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIV 505
+ + A E T++DV+S GV + E++T L G P I
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------LGGNPYP----GIP 257
Query: 506 KEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E N + M +E+ +L L C P RP + + LE++
Sbjct: 258 PERLFNLLKTGHRMERPDNCSEEM---YRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVY---KATLEDGSQVAVKRLREKITKGQRE---FESEVSLLGKIRHPNLL 346
+++G+ ++G V+ K + D Q+ ++ +K T R+ + E +L ++ HP ++
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y +G+ L+ D++ G L T L T D + + L HLHS
Sbjct: 91 KLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALALDHLHSL 146
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
II+ +L N+LLD+ + K++DFGLS+ + Y APE+ +
Sbjct: 147 -GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D +S GV + E+LTG P
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLP 226
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 52/282 (18%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLALR-A 350
+G +G VYKA ++ +A ++ E TK + E E E+ +L HP ++ L A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHA--RGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
YY G+ ++ ++ P G++ + RG + P + + M L LHS +
Sbjct: 77 YY--HDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHS-KR 129
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPELSKLKK 465
IIH +L + NVL+ + +++DFG+S +G + APE+ +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 466 A-----NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520
+ K D++SLG+T++E+ + P LN + + I K
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV---LLKIAK-------------S 229
Query: 521 DAPTI------GDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556
D PT+ E + LK+AL D +P RP Q+++
Sbjct: 230 DPPTLLTPSKWSVEFRDFLKIAL---DKNPETRPSAAQLLEH 268
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 88 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 138
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFG ++L+ + + A E
Sbjct: 139 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 80 YF-HDATRVYLILEYAPLGTVYRELQKL---SRFDEQRTATYITELANALSYCHS-KRVI 134
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521
D++SLGV E L G P E E + ++ + E+T F E RD
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV---EFTFPDFVTEGARD 239
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++ +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 88 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 138
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 139 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVY---KATLEDGSQVAVKRLREKITKGQRE---FESEVSLLGKIRHPNLL 346
+++G+ ++G V+ K + D Q+ ++ +K T R+ + E +L ++ HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y +G+ L+ D++ G L T L T D + + L HLHS
Sbjct: 90 KLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALALDHLHSL 145
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
II+ +L N+LLD+ + K++DFGLS+ + Y APE+ +
Sbjct: 146 -GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D +S GV + E+LTG P
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLP 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 131
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFG ++L+ + + A E
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 83 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 133
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFG ++L+ + + A E
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 35/285 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 30 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR---------GPETPI-DWPTRMKIIK--- 394
L P G +++ ++ G+L+T+L ++ PE D+ T +I
Sbjct: 87 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ +G+ L S + IH +L + N+LL + KI DFGL+R + L
Sbjct: 147 QVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512
+ APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRR 254
Query: 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++ +GTVYK + +G +V A+K LRE + K +E E ++ + +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 131
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX-LGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVY---KATLEDGSQVAVKRLREKITKGQRE---FESEVSLLGKIRHPNLL 346
+++G+ ++G V+ K + D Q+ ++ +K T R+ + E +L ++ HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y +G+ L+ D++ G L T L T D + + L HLHS
Sbjct: 90 KLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALALDHLHSL 145
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
II+ +L N+LLD+ + K++DFGLS+ + Y APE+ +
Sbjct: 146 -GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D +S GV + E+LTG P
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLP 225
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 90 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +LT+ NVL+ ++ KI+DFGL+R +
Sbjct: 146 LVSCTYQLARGMEYLAS-QKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 253
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 254 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 303
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 76 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR---------GPETPI-DWPTRMKIIK--- 394
L P G +++ ++ G+L+T+L ++ PE D+ T +I
Sbjct: 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ +G+ L S + IH +L + N+LL + KI DFGL+R + L
Sbjct: 193 QVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512
+ APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRR 300
Query: 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 301 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 342
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E++G +G V+KA DG +KR++ K +RE V L K+ H N++
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 72
Query: 352 YLG--------------PKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGM 396
+ G K + L + ++ G+L ++ R E +D +++ + +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQI 131
Query: 397 TRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR 456
T+G+ ++HS + +I+ +L SN+ L D+ KI DFGL + L Y
Sbjct: 132 TKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRSKGTLRYM 188
Query: 457 APELSKLKKANTKTDVYSLGVTILELL 483
+PE + + D+Y+LG+ + ELL
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQV----AVKRLREKIT-KGQREFESEVSLLGKIRHPNLL 346
+++G +GTVYK + +G +V A+ LRE + K +E E ++ + +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLH 402
L L + L+ MP G L ++ G + ++W ++I KGM +
Sbjct: 115 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM-----N 165
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 461
+ ++H +L + NVL+ + KI+DFGL++L+ + + A E
Sbjct: 166 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 462 KLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ ++DV+S GVT+ EL+T G P + + +E+
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 262
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 45/295 (15%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQ-REFESEVSLLGKIRHPNLLA 347
+G+ +G V KAT + VAVK L+E + + R+ SE ++L ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETP-------------IDWPTRMKIIK 394
L G LL+ +Y +GSL FL P +D P +
Sbjct: 91 LYGA-CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 395 G--------MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXX 445
G +++G+ +L + ++H +L + N+L+ + KISDFGLSR +
Sbjct: 150 GDLISFAWQISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK 208
Query: 446 XXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIV 505
+ + A E T++DV+S GV + E++T L G P I
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------LGGNPYP----GIP 257
Query: 506 KEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E N + M +E+ +L L C P RP + + LE++
Sbjct: 258 PERLFNLLKTGHRMERPDNCSEEM---YRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLAL 348
E +G YG V A G QVA+K++ + +T +R E+ +L +H N++A+
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAI 119
Query: 349 RAYYLG--PKGE---KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ P GE +V D M L +H+ P+ + + RGL ++
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYM 175
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL 460
HS + +IH +L SN+L++++ KI DFG++R + + YRAPEL
Sbjct: 176 HSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 461 S-KLKKANTKTDVYSLGVTILELLTGKS--PGE 490
L + D++S+G E+L + PG+
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 267
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 19/222 (8%)
Query: 278 GPLMFTADDLLCATAEIMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREF-----E 331
GPL A AEI G YGTVYKA G VA+K +R G
Sbjct: 1 GPLGSMATSRYEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTV 59
Query: 332 SEVSLLGKIR---HPNLLALRAYYLGPKGEK----LLVFDYMPHGSLATFLHARGPETPI 384
EV+LL ++ HPN++ L + ++ LVF+++ L T+L + P +
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD-KAPPPGL 117
Query: 385 DWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXX 444
T +++ RGL LH+N I+H +L N+L+ K++DFGL+R+
Sbjct: 118 PAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQM 174
Query: 445 XXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGK 486
L YRAPE+ T D++S+G E+ K
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLLGKIRHPNLLALRA 350
+GK +G VY A + A+K L + ++ K + + EV + +RHPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y+ L+ +Y P G++ L + D I + L + HS + +I
Sbjct: 80 YF-HDATRVYLILEYAPLGTVYRELQKL---SRFDEQRTATYITELANALSYCHS-KRVI 134
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ N+LL + KI+DFG S L Y PE+ + + + K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521
D++SLGV E L G P E E + ++ + E+T F E RD
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV---EFTFPDFVTEGARD 239
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQ-REFESEVSLLGKIRHPNLLA 347
+G+ +G V KAT + VAVK L+E + + R+ SE ++L ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETP-------------IDWPTRMKIIK 394
L G LL+ +Y +GSL FL P +D P +
Sbjct: 91 LYGA-CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 395 G--------MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXX 445
G +++G+ +L + ++H +L + N+L+ + KISDFGLSR +
Sbjct: 150 GDLISFAWQISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 446 XXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIV 505
+ + A E T++DV+S GV + E++T L G P I
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------LGGNPYP----GIP 257
Query: 506 KEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E N + M +E+ +L L C P RP + + LE++
Sbjct: 258 PERLFNLLKTGHRMERPDNCSEEM---YRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 284 ADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKG-QREFESEVSLLGKIRH 342
+DL +G+ TYG VYKA +DG L++ G E++LL +++H
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 343 PNLLALRAYYLGPKGEKL-LVFDYMPH--GSLATFLHA-RGPETPIDWPTRM--KIIKGM 396
PN+++L+ +L K+ L+FDY H + F A + + P+ P M ++ +
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137
Query: 397 TRGLLHLHSNENIIHGNLTSSNVLL----DDSTNAKISDFGLSRLMXX--XXXXXXXXXX 450
G+ +LH+N ++H +L +N+L+ + KI+D G +RL
Sbjct: 138 LDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196
Query: 451 XXLGYRAPELSKLKKANTKT-DVYSLGVTILELLTGK 486
YRAPEL + TK D++++G ELLT +
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLRE-KITKGQRE-FESEVSLLGKIRHPNLLALRAY 351
+G +YG K + DG + K L +T+ +++ SEV+LL +++HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 352 YLGPKGEKL-LVFDYMPHGSLATFLHARGPETP-IDWPTRMKIIKGMTRGLLHLHSNEN- 408
+ L +V +Y G LA+ + E +D ++++ +T L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 409 ---IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++H +L +NV LD N K+ DFGL+R++ Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY-YMSPEQMNRMS 192
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAEL 497
N K+D++SLG + EL P + EL
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 30 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR---------GPETPI-DWPTRMKIIK--- 394
L P G +++ ++ G+L+T+L ++ PE D+ T +I
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ +G+ L S + IH +L + N+LL + KI DFGL+R + L
Sbjct: 147 QVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512
+ APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRR 254
Query: 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 144/311 (46%), Gaps = 41/311 (13%)
Query: 275 HFDGPLMFTADDLLCATAEI-----MGKSTYGTVYKATL------EDGSQVAVKRLREKI 323
+F ++ D+ A +I +G+ ++G VY+ E ++VA+K + E
Sbjct: 30 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 89
Query: 324 TKGQR-EFESEVSLLGKIRHPNLLALRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE 381
+ +R EF +E S++ + +++ L + +G+ L++ + M G L ++L + PE
Sbjct: 90 SMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPE 147
Query: 382 ---TPIDWP---TRMKIIKG-MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL 434
P+ P ++M + G + G+ +L++N+ +H +L + N ++ + KI DFG+
Sbjct: 148 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 206
Query: 435 SR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPL 492
+R + + + +PE K T +DV+S GV + E+ T + P + L
Sbjct: 207 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 266
Query: 493 NGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQ 552
+ ++ ++ V + L+ D L +++ C +P RP L+
Sbjct: 267 SNEQVLRF------------VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLE 311
Query: 553 VVQQL-EEIRP 562
++ + EE+ P
Sbjct: 312 IISSIKEEMEP 322
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 30 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR---------GPETPI-DWPTRMKIIK--- 394
L P G +++ ++ G+L+T+L ++ PE D+ T +I
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ +G+ L S + IH +L + N+LL + KI DFGL+R + L
Sbjct: 147 QVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512
+ APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRR 254
Query: 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 117/275 (42%), Gaps = 30/275 (10%)
Query: 294 IMGKSTYGTVYKATLEDGS----QVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLAL 348
I+G+ +G VY+ + VAVK ++ T +E F SE ++ + HP+++ L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 349 RAYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
+G E+ ++ + P+G L +L + T + + + + +L S
Sbjct: 75 ----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLESI 128
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
N +H ++ N+L+ K+ DFGLSR + + + +PE ++
Sbjct: 129 -NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 467 NTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525
T +DV+ V + E+L+ GK P L ++ + + K + P +
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPFFWLENKDV---IGVLEKGD----------RLPKPDL 234
Query: 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+L T L C D PS RP ++V L ++
Sbjct: 235 CPPVLYT--LMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLRE-KITKGQRE-FESEVSLLGKIRHPNLLALRAY 351
+G +YG K + DG + K L +T+ +++ SEV+LL +++HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 352 YLGPKGEKL-LVFDYMPHGSLATFLHARGPETP-IDWPTRMKIIKGMTRGLLHLHSNEN- 408
+ L +V +Y G LA+ + E +D ++++ +T L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 409 ---IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++H +L +NV LD N K+ DFGL+R++ Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY-YMSPEQMNRMS 192
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAEL 497
N K+D++SLG + EL P + EL
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRL---REKITKGQREFESEVSLLGKIRHPNLLAL 348
E +G YG V A G QVA+K++ + +T +R E+ +L +H N++A+
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAI 118
Query: 349 RAYY--LGPKGE---KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ P GE +V D M L +H+ P+ + + RGL ++
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYM 174
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL 460
HS + +IH +L SN+L++++ KI DFG++R + + YRAPEL
Sbjct: 175 HSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 461 S-KLKKANTKTDVYSLGVTILELLTGKS--PGE 490
L + D++S+G E+L + PG+
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 35/285 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 30 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR---------GPETPI-DWPTRMKIIK--- 394
L P G +++ ++ G+L+T+L ++ PE D+ T +I
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXL 453
+ +G+ L S + IH +L + N+LL + KI DFGL+R + L
Sbjct: 147 QVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512
+ APE + ++DV+S GV + E+ + G SP + + EE+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDEEFCRR 254
Query: 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
+ + MR E+ T+ L C PS RP ++V+ L
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 117/275 (42%), Gaps = 30/275 (10%)
Query: 294 IMGKSTYGTVYKATLEDGS----QVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLAL 348
I+G+ +G VY+ + VAVK ++ T +E F SE ++ + HP+++ L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 349 RAYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
+G E+ ++ + P+G L +L + T + + + + +L S
Sbjct: 91 ----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLESI 144
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
N +H ++ N+L+ K+ DFGLSR + + + +PE ++
Sbjct: 145 -NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 467 NTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525
T +DV+ V + E+L+ GK P L ++ + + K + P +
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFFWLENKDV---IGVLEKGD----------RLPKPDL 250
Query: 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+L T L C D PS RP ++V L ++
Sbjct: 251 CPPVLYT--LMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 117/275 (42%), Gaps = 30/275 (10%)
Query: 294 IMGKSTYGTVYKATLEDGS----QVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLAL 348
I+G+ +G VY+ + VAVK ++ T +E F SE ++ + HP+++ L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 349 RAYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
+G E+ ++ + P+G L +L + T + + + + +L S
Sbjct: 79 ----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLESI 132
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
N +H ++ N+L+ K+ DFGLSR + + + +PE ++
Sbjct: 133 -NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 467 NTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525
T +DV+ V + E+L+ GK P L ++ + + K + P +
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFFWLENKDV---IGVLEKGD----------RLPKPDL 238
Query: 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
+L T L C D PS RP ++V L ++
Sbjct: 239 CPPVLYT--LMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 90 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 147
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E++G +G V+KA DG ++R++ K +RE V L K+ H N++
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 73
Query: 352 YLG------------------PKGEK----------LLVFDYMPHGSLATFLHARGPETP 383
+ G P+ K + ++ G+L ++ R E
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-K 132
Query: 384 IDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXX 443
+D +++ + +T+G+ ++HS + +IH +L SN+ L D+ KI DFGL +
Sbjct: 133 LDKVLALELFEQITKGVDYIHSKK-LIHRDLKPSNIFLVDTKQVKIGDFGL--VTSLKND 189
Query: 444 XXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELL 483
L Y +PE + + D+Y+LG+ + ELL
Sbjct: 190 GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLRE-KITKGQRE-FESEVSLLGKIRHPNLLALRAY 351
+G +YG K + DG + K L +T+ +++ SEV+LL +++HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 352 YLGPKGEKL-LVFDYMPHGSLATFLHARGPETP-IDWPTRMKIIKGMTRGLLHLHSNEN- 408
+ L +V +Y G LA+ + E +D ++++ +T L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 409 ---IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++H +L +NV LD N K+ DFGL+R++ Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPY-YMSPEQMNRMS 192
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAEL 497
N K+D++SLG + EL P + EL
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 91
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 92 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 149
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 94
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 95 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 152
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGK 236
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 95
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 96 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 153
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 214 SIDIWSVGCILAEMLSNRPIFPGK 237
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 86
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 87 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 144
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 205 SIDIWSVGCILAEMLSNRPIFPGK 228
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 94 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 151
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 97
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 98 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 155
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 470 T-DVYSLGVTILELLTGK 486
+ D++S+G + E+L+ +
Sbjct: 216 SIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 90 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 147
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 470 T-DVYSLGVTILELLTGK 486
+ D++S+G + E+L+ +
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 87
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 88 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 145
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGK 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 94 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 151
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 211
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 87
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 88 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 145
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGK 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 94
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 95 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 152
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 212
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGK 236
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 103 IITL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 90 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 147
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 109
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 110 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 167
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 94 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 151
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 144/311 (46%), Gaps = 41/311 (13%)
Query: 275 HFDGPLMFTADDLLCATAEI-----MGKSTYGTVYKATL------EDGSQVAVKRLREKI 323
+F ++ D+ A +I +G+ ++G VY+ E ++VA+K + E
Sbjct: 8 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67
Query: 324 TKGQR-EFESEVSLLGKIRHPNLLALRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE 381
+ +R EF +E S++ + +++ L + +G+ L++ + M G L ++L + PE
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPE 125
Query: 382 ---TPIDWP---TRMKIIKG-MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL 434
P+ P ++M + G + G+ +L++N+ +H +L + N ++ + KI DFG+
Sbjct: 126 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 435 SR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPL 492
+R + + + +PE K T +DV+S GV + E+ T + P + L
Sbjct: 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244
Query: 493 NGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQ 552
+ ++ ++ V + L+ D L +++ C +P RP L+
Sbjct: 245 SNEQVLRF------------VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLE 289
Query: 553 VVQQL-EEIRP 562
++ + EE+ P
Sbjct: 290 IISSIKEEMEP 300
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 94 IRAPTIEQMKDV-YIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS-ANVLH 151
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 95 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 151 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 258
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 259 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 308
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 142/305 (46%), Gaps = 41/305 (13%)
Query: 281 MFTADDLLCATAEI-----MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQR- 328
+F D+ A +I +G+ ++G VY+ E ++VA+K + E + +R
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 329 EFESEVSLLGKIRHPNLLALRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE---TPI 384
EF +E S++ + +++ L + +G+ L++ + M G L ++L + PE P+
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 385 DWP---TRMKIIKG-MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMX 439
P ++M + G + G+ +L++N+ +H +L + N ++ + KI DFG++R +
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 440 XXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELP 498
+ + +PE K T +DV+S GV + E+ T + P + L+ ++
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 241
Query: 499 QWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL- 557
++ V + L+ D L +++ C +P RP L+++ +
Sbjct: 242 RF------------VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 286
Query: 558 EEIRP 562
EE+ P
Sbjct: 287 EEMEP 291
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 90 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 147
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 92 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 148 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 255
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 256 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 305
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 143/310 (46%), Gaps = 41/310 (13%)
Query: 276 FDGPLMFTADDLLCATAEI-----MGKSTYGTVYKATL------EDGSQVAVKRLREKIT 324
F ++ D+ A +I +G+ ++G VY+ E ++VA+K + E +
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 325 KGQR-EFESEVSLLGKIRHPNLLALRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE- 381
+R EF +E S++ + +++ L + +G+ L++ + M G L ++L + PE
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 382 --TPIDWP---TRMKIIKG-MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLS 435
P+ P ++M + G + G+ +L++N+ +H +L + N ++ + KI DFG++
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 436 R-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLN 493
R + + + +PE K T +DV+S GV + E+ T + P + L+
Sbjct: 180 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
Query: 494 GAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQV 553
++ ++ V + L+ D L +++ C +P RP L++
Sbjct: 240 NEQVLRF------------VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEI 284
Query: 554 VQQL-EEIRP 562
+ + EE+ P
Sbjct: 285 ISSIKEEMEP 294
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V+ + +G A+K L+++I ++ E E +L + HP ++ +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLH--ARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + ++ DY+ G L + L R P P + L +LHS ++
Sbjct: 74 TFQDAQ-QIFMIMDYIEGGELFSLLRKSQRFPN-----PVAKFYAAEVCLALEYLHS-KD 126
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L N+LLD + + KI+DFG ++ + Y APE+ K N
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTP----DYIAPEVVSTKPYNK 182
Query: 469 KTDVYSLGVTILELLTGKSP 488
D +S G+ I E+L G +P
Sbjct: 183 SIDWWSFGILIYEMLAGYTP 202
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA++++ E T QR E+ +L + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 94 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 151
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 103 IIHL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 138/286 (48%), Gaps = 36/286 (12%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ E ++VA+K + E + +R EF +E S++ + +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE---TPIDWP---TRMKIIKG-MTRG 399
L + +G+ L++ + M G L ++L + PE P+ P ++M + G + G
Sbjct: 78 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++N+ +H +L + N ++ + KI DFG++R + + + +P
Sbjct: 136 MAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +DV+S GV + E+ T + P + L+ ++ ++ V +
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 242
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL-EEIRP 562
L+ D LL +++ C +P RP L+++ + EE+ P
Sbjct: 243 LLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIKEEMEP 285
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 103 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 149 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 205 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 312
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 313 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 362
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDI 91
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 92 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 149
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ +++ KI DFGL+R+ YRAPE+ K TK
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 103 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGINDI 93
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 94 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 151
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDI 91
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 92 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 149
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 145/310 (46%), Gaps = 41/310 (13%)
Query: 276 FDGPLMFTADDLLCATAEI-----MGKSTYGTVYKATL------EDGSQVAVKRLREKIT 324
F ++ D+ A +I +G+ ++G VY+ E ++VA+K + E +
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 325 KGQR-EFESEVSLLGKIRHPNLLALRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE- 381
+R EF +E S++ + +++ L + +G+ L++ + M G L ++L + PE
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 382 --TPIDWP---TRMKIIKG-MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLS 435
P+ P ++M + G + G+ +L++N+ +H +L + N ++ + KI DFG++
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 436 R-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLN 493
R + + + +PE K T +DV+S GV + E+ T + P + L+
Sbjct: 180 RDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
Query: 494 GAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQV 553
++ ++ V + L+ D L +++ C +P RP L++
Sbjct: 240 NEQVLRF------------VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEI 284
Query: 554 VQQL-EEIRP 562
+ + EE+ P
Sbjct: 285 ISSIKEEMEP 294
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 103 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + T L+ + + + RGL ++HS N++H
Sbjct: 90 IRAPTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 147
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFE-SEVSLLGKIRHPNLLALRA 350
E +G TY TVYK G VA+K ++ +G E+SL+ +++H N++ R
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV--RL 68
Query: 351 YYLGPKGEKL-LVFDYMPHGSLATFLHARGP-ETPIDWPTRMKIIK----GMTRGLLHLH 404
Y + KL LVF++M + L ++ +R TP + ++K + +GL H
Sbjct: 69 YDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRG--LELNLVKYFQWQLLQGLAFCH 125
Query: 405 SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 463
N+ I+H +L N+L++ K+ DFGL+R L YRAP+ L
Sbjct: 126 ENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
+ +T D++S G + E++TGK
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGK 206
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 135/286 (47%), Gaps = 36/286 (12%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ E ++VA+K + E + +R EF +E S++ + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE---TPIDWP---TRMKIIKG-MTRG 399
L + +G+ L++ + M G L ++L + PE P+ P ++M + G + G
Sbjct: 86 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++N+ +H +L + N ++ + KI DFG++R + + + +P
Sbjct: 144 MAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +DV+S GV + E+ T + P + L+ ++ ++ V +
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 250
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL-EEIRP 562
L+ D L +++ C +P RP L+++ + EE+ P
Sbjct: 251 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP 293
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 135/286 (47%), Gaps = 36/286 (12%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ E ++VA+K + E + +R EF +E S++ + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE---TPIDWP---TRMKIIKG-MTRG 399
L + +G+ L++ + M G L ++L + PE P+ P ++M + G + G
Sbjct: 86 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++N+ +H +L + N ++ + KI DFG++R + + + +P
Sbjct: 144 MAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +DV+S GV + E+ T + P + L+ ++ ++ V +
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 250
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL-EEIRP 562
L+ D L +++ C +P RP L+++ + EE+ P
Sbjct: 251 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP 293
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQ-VAVKRLREKITKG--QREFESEVSLLGKIRHPNLLALRAY 351
+G+ +YG V+K D Q VA+K+ E ++ E+ +L +++HPNL+ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 352 YLGPKGEKLLVFDYMPHGSLATF-LHARG-PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ K LVF+Y H L + RG PE + K I T ++ N
Sbjct: 71 FRR-KRRLHLVFEYCDHTVLHELDRYQRGVPEHLV------KSITWQTLQAVNFCHKHNC 123
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKANT 468
IH ++ N+L+ + K+ DFG +RL+ YR+PE L +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW-YRSPELLVGDTQYGP 182
Query: 469 KTDVYSLGVTILELLTG 485
DV+++G ELL+G
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 135/286 (47%), Gaps = 36/286 (12%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ E ++VA+K + E + +R EF +E S++ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE---TPIDWP---TRMKIIKG-MTRG 399
L + +G+ L++ + M G L ++L + PE P+ P ++M + G + G
Sbjct: 80 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++N+ +H +L + N ++ + KI DFG++R + + + +P
Sbjct: 138 MAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +DV+S GV + E+ T + P + L+ ++ ++ V +
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 244
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL-EEIRP 562
L+ D L +++ C +P RP L+++ + EE+ P
Sbjct: 245 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP 287
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 282 FTADDLLCATAEIMGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLL 337
FT DD +GK +G VY A + + A+K L + ++ K + + E+ +
Sbjct: 11 FTIDDF--DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 338 GKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMT 397
+RHPN+L + Y+ K L+ ++ P G L L G D ++ +
Sbjct: 69 SHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELA 124
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRA 457
L + H + +IH ++ N+L+ KI+DFG S L Y
Sbjct: 125 DALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLP 180
Query: 458 PELSKLKKANTKTDVYSLGVTILELLTGKSP 488
PE+ + K + K D++ GV E L G P
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 282 FTADDLLCATAEIMGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLL 337
FT DD +GK +G VY A + + A+K L + ++ K + + E+ +
Sbjct: 12 FTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 69
Query: 338 GKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMT 397
+RHPN+L + Y+ K L+ ++ P G L L G D ++ +
Sbjct: 70 SHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELA 125
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRA 457
L + H + +IH ++ N+L+ KI+DFG S L Y
Sbjct: 126 DALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLP 181
Query: 458 PELSKLKKANTKTDVYSLGVTILELLTGKSP 488
PE+ + K + K D++ GV E L G P
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRL-REKITKGQR--EFESEVSLLGKIRHPNLLA 347
+ +G T+G V + G +VAVK L R+KI + + E+ L RHP+++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFL--HARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
L P + +V +Y+ G L ++ H R E ++ + + + + H
Sbjct: 76 LYQVISTPT-DFFMVMEYVSGGELFDYICKHGRVEEM-----EARRLFQQILSAVDYCHR 129
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLK 464
+ ++H +L NVLLD NAKI+DFGLS +M Y APE +S
Sbjct: 130 H-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSP--NYAAPEVISGRL 186
Query: 465 KANTKTDVYSLGVTILELLTGKSP 488
A + D++S GV + LL G P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 103 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ +I+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 282 FTADDLLCATAEIMGKSTYGTVYKATLEDGSQV-AVKRL-REKITKG--QREFESEVSLL 337
FT DD +GK +G VY A + + A+K L + ++ K + + E+ +
Sbjct: 11 FTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 338 GKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMT 397
+RHPN+L + Y+ K L+ ++ P G L L G D ++ +
Sbjct: 69 SHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELA 124
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRA 457
L + H + +IH ++ N+L+ KI+DFG S L Y
Sbjct: 125 DALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLP 180
Query: 458 PELSKLKKANTKTDVYSLGVTILELLTGKSP 488
PE+ + K + K D++ GV E L G P
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G+ ++G V Y T G +VA+K + +K+ + Q E E+S L +RHP+++ L
Sbjct: 22 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ K E ++V +Y + L ++ R + + + + + + H ++
Sbjct: 80 YDV-IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE---QEARRFFQQIISAVEYCHRHK- 133
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-KAN 467
I+H +L N+LLD+ N KI+DFGLS +M Y APE+ K A
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVISGKLYAG 191
Query: 468 TKTDVYSLGVTILELLTGKSP 488
+ DV+S GV + +L + P
Sbjct: 192 PEVDVWSCGVILYVMLCRRLP 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRL-REKITKGQR--EFESEVSLLGKIRHPNLLA 347
+ +G T+G V + G +VAVK L R+KI + + E+ L RHP+++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFL--HARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
L P + +V +Y+ G L ++ H R E ++ + + + + H
Sbjct: 76 LYQVISTPT-DFFMVMEYVSGGELFDYICKHGRVEEM-----EARRLFQQILSAVDYCHR 129
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLK 464
+ ++H +L NVLLD NAKI+DFGLS +M Y APE +S
Sbjct: 130 H-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSP--NYAAPEVISGRL 186
Query: 465 KANTKTDVYSLGVTILELLTGKSP 488
A + D++S GV + LL G P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G+ ++G V Y T G +VA+K + +K+ + Q E E+S L +RHP+++ L
Sbjct: 21 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ K E ++V +Y + L ++ R + + + + + + H ++
Sbjct: 79 YDV-IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE---QEARRFFQQIISAVEYCHRHK- 132
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-KAN 467
I+H +L N+LLD+ N KI+DFGLS +M Y APE+ K A
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVISGKLYAG 190
Query: 468 TKTDVYSLGVTILELLTGKSP 488
+ DV+S GV + +L + P
Sbjct: 191 PEVDVWSCGVILYVMLCRRLP 211
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 135/286 (47%), Gaps = 36/286 (12%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ E ++VA+K + E + +R EF +E S++ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPE---TPIDWP---TRMKIIKG-MTRG 399
L + +G+ L++ + M G L ++L + PE P+ P ++M + G + G
Sbjct: 80 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++N+ +H +L + N + + KI DFG++R + + + +P
Sbjct: 138 MAYLNANK-FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +DV+S GV + E+ T + P + L+ ++ ++ V +
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 244
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL-EEIRP 562
L+ D LL +++ C +P RP L+++ + EE+ P
Sbjct: 245 LLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIKEEMEP 287
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T+ + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ +Y G+L +L AR P E + +
Sbjct: 103 IINL----LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ Y G+L +L AR P E + +
Sbjct: 103 IINL----LGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 333 EVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI 392
EV++L + HPN++ L ++ K LV + G L + R +D I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFF-EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---I 141
Query: 393 IKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXXXXXXXXX 449
IK + G+ +LH + NI+H +L N+LL+ KI DFGLS +
Sbjct: 142 IKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG 200
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
Y APE+ + KK + K DV+S+GV + LL G P
Sbjct: 201 TAY--YIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G+ ++G V Y T G +VA+K + +K+ + Q E E+S L +RHP+++ L
Sbjct: 16 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ K E ++V +Y + L ++ R + + + + + + H ++
Sbjct: 74 YDV-IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE---QEARRFFQQIISAVEYCHRHK- 127
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-KAN 467
I+H +L N+LLD+ N KI+DFGLS +M Y APE+ K A
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVISGKLYAG 185
Query: 468 TKTDVYSLGVTILELLTGKSP 488
+ DV+S GV + +L + P
Sbjct: 186 PEVDVWSCGVILYVMLCRRLP 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G+ ++G V Y T G +VA+K + +K+ + Q E E+S L +RHP+++ L
Sbjct: 12 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ K E ++V +Y + L ++ R + + + + + + H ++
Sbjct: 70 YDV-IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE---QEARRFFQQIISAVEYCHRHK- 123
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-KAN 467
I+H +L N+LLD+ N KI+DFGLS +M Y APE+ K A
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVISGKLYAG 181
Query: 468 TKTDVYSLGVTILELLTGKSP 488
+ DV+S GV + +L + P
Sbjct: 182 PEVDVWSCGVILYVMLCRRLP 202
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALR 349
+ +G+ YG V A ++VA+K++ E T QR E+ +L + RH N++ +R
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIGIR 107
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
E + Y+ + T L+ + + + RGL ++HS N+
Sbjct: 108 DILRASTLEAMRDV-YIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS-ANV 165
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H +L SN+L++ + + KI DFGL+R+ YRAPE+ K
Sbjct: 166 LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGY 225
Query: 468 TKT-DVYSLGVTILELLTGK 486
TK+ D++S+G + E+L+ +
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 46/293 (15%)
Query: 295 MGKSTYGTVYKATL--------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPN 344
+G+ +G V A ++ VAVK L++ T K + SE+ ++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPT 388
++ L LG G ++ Y G+L +L AR P E + +
Sbjct: 103 IINL----LGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 389 RMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXX 447
+ + RG+ +L S + IH +L + NVL+ ++ KI+DFGL+R +
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 448 XXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+ + APE + ++DV+S GV + E+ T L G+ P I E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSPYP----GIPVE 266
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
E + + M +EL ++ H V PS RP Q+V+ L+ I
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRI 316
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 9/199 (4%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V++ T G+ A K + + E+ + +RHP L+ L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
+ E ++++++M G L F + ++ ++ + +GL H+H N N +H
Sbjct: 223 FED-DNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVH 278
Query: 412 GNLTSSNVLL--DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L N++ S K+ DFGL+ + APE+++ K
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA--APEVAEGKPVGYY 336
Query: 470 TDVYSLGVTILELLTGKSP 488
TD++S+GV LL+G SP
Sbjct: 337 TDMWSVGVLSYILLSGLSP 355
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 293 EIMGKSTYGTVY---KATLEDGSQVAVKRLREKITKGQR-----EFESEVSLLGKIRHPN 344
+++G YG V+ K + D ++ ++ +K T Q+ +E +L IR
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG-MTRGLLHL 403
L Y + + L+ DY+ G L T L R T ++I G + L HL
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE----HEVQIYVGEIVLALEHL 175
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
H II+ ++ N+LLD + + ++DFGLS+ + Y AP++ +
Sbjct: 176 HKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 464 KKA--NTKTDVYSLGVTILELLTGKSP----GEPLNGAELPQWV 501
+ + D +SLGV + ELLTG SP GE + AE+ + +
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 278
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLR-----EKITKGQREFESEVSLLGKIRHPNLL 346
E +G+ TYGTV+KA E VA+KR+R E + E+ LL +++H N++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIV 64
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG----MTRGLLH 402
L L + LVF++ F G P +I+K + +GL
Sbjct: 65 RLHDV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-------EIVKSFLFQLLKGLGF 116
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LS 461
HS N++H +L N+L++ + K++DFGL+R L YR P+ L
Sbjct: 117 CHS-RNVLHRDLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVVTLWYRPPDVLF 174
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE 496
K +T D++S G EL P P N +
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVD 209
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 114/267 (42%), Gaps = 31/267 (11%)
Query: 301 GTVYKATLEDGSQVAVK--RLREKITKGQREFESEVSLLGKIRHPNLL-ALRAYYLGPKG 357
G ++K + G+ + VK ++R+ T+ R+F E L HPN+L L A P
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 358 EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN-LTS 416
L+ + P+GSL LH G +D +K RG LH+ E +I + L S
Sbjct: 83 HPTLITHWXPYGSLYNVLH-EGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNS 141
Query: 417 SNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK---TDVY 473
+V +D+ A+IS + + APE + K +T D +
Sbjct: 142 RSVXIDEDXTARISXADVKFSFQSPGRXYAP------AWVAPEALQKKPEDTNRRSADXW 195
Query: 474 SLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDEL-LNT 532
S V + EL+T + P L+ E+ VA LE +R PTI + +
Sbjct: 196 SFAVLLWELVTREVPFADLSNXEIGXKVA-------------LEGLR--PTIPPGISPHV 240
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEE 559
KL C + P+ RP+ +V LE+
Sbjct: 241 SKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 143/311 (45%), Gaps = 41/311 (13%)
Query: 275 HFDGPLMFTADDLLCATAEI-----MGKSTYGTVYKATL------EDGSQVAVKRLREKI 323
+F ++ D+ A +I +G+ ++G VY+ E ++VA+K + E
Sbjct: 8 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67
Query: 324 TKGQR-EFESEVSLLGKIRHPNLLALRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGP- 380
+ +R EF +E S++ + +++ L + +G+ L++ + M G L ++L + P
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPA 125
Query: 381 --ETPIDWP---TRMKIIKG-MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL 434
P+ P ++M + G + G+ +L++N+ +H +L + N ++ + KI DFG+
Sbjct: 126 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 435 SR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPL 492
+R + + + +PE K T +DV+S GV + E+ T + P + L
Sbjct: 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244
Query: 493 NGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQ 552
+ ++ ++ V + L+ D L +++ C +P RP L+
Sbjct: 245 SNEQVLRF------------VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLE 289
Query: 553 VVQQL-EEIRP 562
++ + EE+ P
Sbjct: 290 IISSIKEEMEP 300
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALR-AY 351
+G G V+K + + G +A K + +I R + E+ +L + P ++ A+
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y GE + ++M GSL L G PE I + +IKG+T +L I
Sbjct: 77 Y--SDGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKI 129
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ SN+L++ K+ DFG+S + Y +PE + + +
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS---YMSPERLQGTHYSVQ 186
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518
+D++S+G++++E+ G+ P P+ EL ++ + + + VF LE
Sbjct: 187 SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEF 235
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 157
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 158 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 213
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 214 VDIWSVGCIMAELLTGRTLFPG 235
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS-ADII 143
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPG 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 316 VKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATF 374
V+ LRE K EV +L K+ HPN++ L+ Y LVFD M G L +
Sbjct: 50 VQELREATLK-------EVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDY 101
Query: 375 LHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL 434
L + T + TR KI++ + + LH NI+H +L N+LLDD N K++DFG
Sbjct: 102 LTEKV--TLSEKETR-KIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 435 SRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT------KTDVYSLGVTILELLTGKSP 488
S + Y APE+ + + + D++S GV + LL G P
Sbjct: 158 SCQLDPGEKLREVCGTP--SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 9/199 (4%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V++ T G+ A K + + E+ + +RHP L+ L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
+ E ++++++M G L F + ++ ++ + +GL H+H N N +H
Sbjct: 117 FED-DNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVH 172
Query: 412 GNLTSSNVLL--DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L N++ S K+ DFGL+ + APE+++ K
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA--APEVAEGKPVGYY 230
Query: 470 TDVYSLGVTILELLTGKSP 488
TD++S+GV LL+G SP
Sbjct: 231 TDMWSVGVLSYILLSGLSP 249
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 167
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPG 245
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ + KI DFGL R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 166
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPG 244
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 143
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPG 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 143
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQT 199
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPG 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 153
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPG 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 167
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGXVATRWYRAPEIMLNWMHYNQT 223
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPG 245
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 41/290 (14%)
Query: 294 IMGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAY 351
++ + + VY+A + G + A+KRL + R EV + K+ HPN++ +
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 352 YLGPKGE------KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
K E + L+ + G L FL P+ T +KI R + H+H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 406 NEN-IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXL----------- 453
+ IIH +L N+LL + K+ DFG + + L
Sbjct: 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTP 214
Query: 454 GYRAPELSKLKK---ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWT 510
YR PE+ L K D+++LG + L + P E +GA+L IV +++
Sbjct: 215 MYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE--DGAKL-----RIVNGKYS 267
Query: 511 NEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560
D + T+ L+ + + +P R + +VV QL+EI
Sbjct: 268 IPPHDTQY-----TVFHSLIRAM------LQVNPEERLSIAEVVHQLQEI 306
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 316 VKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATF 374
V+ LRE K EV +L K+ HPN++ L+ Y LVFD M G L +
Sbjct: 63 VQELREATLK-------EVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDY 114
Query: 375 LHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL 434
L + T + TR KI++ + + LH NI+H +L N+LLDD N K++DFG
Sbjct: 115 LTEKV--TLSEKETR-KIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 435 SRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT------KTDVYSLGVTILELLTGKSP 488
S + Y APE+ + + + D++S GV + LL G P
Sbjct: 171 SCQLDPGEKLREVCGTP--SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 316 VKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGPKGEKLLVFDYMPHGSLATF 374
V+ LRE K EV +L K+ HPN++ L+ Y LVFD M G L +
Sbjct: 63 VQELREATLK-------EVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDY 114
Query: 375 LHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL 434
L + T + TR KI++ + + LH NI+H +L N+LLDD N K++DFG
Sbjct: 115 LTEKV--TLSEKETR-KIMRALLEVICALH-KLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 435 SRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT------KTDVYSLGVTILELLTGKSP 488
S + Y APE+ + + + D++S GV + LL G P
Sbjct: 171 SCQLDPGEKLRSVCGTP--SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 154
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPG 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 154
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPG 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 154
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPG 232
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIR-HPNLLALR 349
+GK YG V+K+ G VAVK++ + T QR F E+ +L ++ H N++ L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 350 AYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ LVFDYM T LHA ++ + ++ + + + +LHS
Sbjct: 76 NVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG-G 129
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXX--------------------XX 448
++H ++ SN+LL+ + K++DFGLSR
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 449 XXXXLGYRAPELSKLKKANTK-TDVYSLGVTILELLTGK 486
YRAPE+ TK D++SLG + E+L GK
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 149
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ + KI DFGL+R YRAPE+ N
Sbjct: 150 HRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPG 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 294 IMGKSTYGTVYKATLEDGSQ----VAVKRLREKI----TKGQREFESEVSLLGKIRHPNL 345
++GK YG V++ G+ A+K L++ + K ++E ++L +++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L Y G+ L+ +Y+ G L L G T + ++ L HLH
Sbjct: 84 VDL-IYAFQTGGKLYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMALGHLH- 138
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+ II+ +L N++L+ + K++DFGL + + Y APE+
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGTIEYMAPEILMRSG 197
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
N D +SLG + ++LTG P
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 295 MGKSTYGTVYKATLED------GSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ D ++VAVK + E + +R EF +E S++ +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGMTRG 399
L + KG+ L+V + M HG L ++L + PE P +++ + G
Sbjct: 86 LLG--VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++ + +H NL + N ++ KI DFG++R + + + AP
Sbjct: 144 MAYLNAKK-FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +D++S GV + E+ + + P + L+ ++ ++ V D
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 250
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
+ + + + +++ C +P+ RP L++V L++
Sbjct: 251 YLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 289
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 153
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ + KI DFGL+R YRAPE+ N
Sbjct: 154 HRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPG 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 295 MGKSTYGTVYKATLED------GSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ D ++VAVK + E + +R EF +E S++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGMTRG 399
L + KG+ L+V + M HG L ++L + PE P +++ + G
Sbjct: 85 LLG--VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++ + +H NL + N ++ KI DFG++R + + + AP
Sbjct: 143 MAYLNAKK-FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +D++S GV + E+ + + P + L+ ++ ++ V D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
+ + + + +++ C +P+ RP L++V L++
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 159
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPG 237
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 154
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPG 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 159
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPG 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 159
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPG 237
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 294 IMGKSTYGTVYKATLEDGSQ----VAVKRLREKI----TKGQREFESEVSLLGKIRHPNL 345
++GK YG V++ G+ A+K L++ + K ++E ++L +++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L Y G+ L+ +Y+ G L L G T + ++ L HLH
Sbjct: 84 VDL-IYAFQTGGKLYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMALGHLH- 138
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+ II+ +L N++L+ + K++DFGL + + Y APE+
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAPEILMRSG 197
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
N D +SLG + ++LTG P
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 149
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPG 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 149
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPG 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 152
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPG 230
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 152
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPG 230
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 170
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGYVATRWYRAPEIMLNWMHYNQT 226
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 227 VDIWSVGCIMAELLTGRTLFPG 248
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 146
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 147 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 202
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 203 VDIWSVGCIMAELLTGRTLFPG 224
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 153
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPG 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 144
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPG 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 12 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 63 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 119 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLR--EKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ YG V A + +VA+K++ E T QR E+ +L + RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 109
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
P E++ Y+ + L+ + + + RGL ++HS N++H
Sbjct: 110 IRAPTIEQMKDV-YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLH 167
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLM--XXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+L SN+LL+ + + KI DFGL+R+ YRAPE+ K TK
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 470 T-DVYSLGVTILELLTGKS--PGE 490
+ D++S+G + E+L+ + PG+
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 302 TVYKATLEDGSQVAVKRLR--------EKITKGQREFESEVSLLGKIR-HPNLLALRAYY 352
V++AT G + AVK + E++ + + E +L ++ HP+++ L Y
Sbjct: 113 CVHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
LVFD M G L +L + + I++ + + LH+N NI+H
Sbjct: 170 -ESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN-NIVHR 224
Query: 413 NLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT---- 468
+L N+LLDD+ ++SDFG S + GY APE+ K T
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTP--GYLAPEILKCSMDETHPGY 282
Query: 469 --KTDVYSLGVTILELLTGKSP 488
+ D+++ GV + LL G P
Sbjct: 283 GKEVDLWACGVILFTLLAGSPP 304
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 170
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 226
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 227 VDIWSVGCIMAELLTGRTLFPG 248
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 167
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPG 245
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 143
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPG 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 149
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPG 227
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGP---KGEKLLVFDYM 366
++VAVK L+ T K + SE+ ++ I +H N++ L LG G ++ +Y
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL----LGACTQDGPLYVIVEYA 116
Query: 367 PHGSLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
G+L +L AR PE + + + RG+ +L S + IH +
Sbjct: 117 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRD 175
Query: 414 LTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
L + NVL+ + KI+DFGL+R + + + APE + ++DV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 473 YSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
+S GV + E+ T L G+ P + EE + + M +EL
Sbjct: 236 WSFGVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMM 284
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ H V PS RP Q+V+ L+ I
Sbjct: 285 MRDCWHAV---PSQRPTFKQLVEDLDRI 309
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 145
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 146 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 202 VDIWSVGCIMAELLTGRTLFPG 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 166
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPG 244
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 144
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPG 222
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGP---KGEKLLVFDYM 366
++VAVK L+ T K + SE+ ++ I +H N++ L LG G ++ +Y
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL----LGACTQDGPLYVIVEYA 157
Query: 367 PHGSLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
G+L +L AR PE + + + RG+ +L S + IH +
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRD 216
Query: 414 LTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
L + NVL+ + KI+DFGL+R + + + APE + ++DV
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276
Query: 473 YSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
+S GV + E+ T L G+ P + EE + + M +EL
Sbjct: 277 WSFGVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMM 325
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ H V PS RP Q+V+ L+ I
Sbjct: 326 MRDCWHAV---PSQRPTFKQLVEDLDRI 350
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 153
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPG 231
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGP---KGEKLLVFDYM 366
++VAVK L+ T K + SE+ ++ I +H N++ L LG G ++ +Y
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL----LGACTQDGPLYVIVEYA 109
Query: 367 PHGSLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
G+L +L AR PE + + + RG+ +L S + IH +
Sbjct: 110 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRD 168
Query: 414 LTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
L + NVL+ + KI+DFGL+R + + + APE + ++DV
Sbjct: 169 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 228
Query: 473 YSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
+S GV + E+ T L G+ P + EE + + M +EL
Sbjct: 229 WSFGVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMM 277
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ H V PS RP Q+V+ L+ I
Sbjct: 278 MRDCWHAV---PSQRPTFKQLVEDLDRI 302
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 152
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPG 230
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGP---KGEKLLVFDYM 366
++VAVK L+ T K + SE+ ++ I +H N++ L LG G ++ +Y
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL----LGACTQDGPLYVIVEYA 116
Query: 367 PHGSLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
G+L +L AR PE + + + RG+ +L S + IH +
Sbjct: 117 SKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRD 175
Query: 414 LTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
L + NVL+ + KI+DFGL+R + + + APE + ++DV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 473 YSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
+S GV + E+ T L G+ P + EE + + M +EL
Sbjct: 236 WSFGVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMM 284
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ H V PS RP Q+V+ L+ I
Sbjct: 285 MRDCWHAV---PSQRPTFKQLVEDLDRI 309
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGP---KGEKLLVFDYM 366
++VAVK L+ T K + SE+ ++ I +H N++ L LG G ++ +Y
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL----LGACTQDGPLYVIVEYA 116
Query: 367 PHGSLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
G+L +L AR PE + + + RG+ +L S + IH +
Sbjct: 117 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRD 175
Query: 414 LTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
L + NVL+ + KI+DFGL+R + + + APE + ++DV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 473 YSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
+S GV + E+ T L G+ P + EE + + M +EL
Sbjct: 236 WSFGVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMM 284
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ H V PS RP Q+V+ L+ I
Sbjct: 285 MRDCWHAV---PSQRPTFKQLVEDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGP---KGEKLLVFDYM 366
++VAVK L+ T K + SE+ ++ I +H N++ L LG G ++ +Y
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL----LGACTQDGPLYVIVEYA 105
Query: 367 PHGSLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
G+L +L AR PE + + + RG+ +L S + IH +
Sbjct: 106 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRD 164
Query: 414 LTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
L + NVL+ + KI+DFGL+R + + + APE + ++DV
Sbjct: 165 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 224
Query: 473 YSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
+S GV + E+ T L G+ P + EE + + M +EL
Sbjct: 225 WSFGVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMM 273
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ H V PS RP Q+V+ L+ I
Sbjct: 274 MRDCWHAV---PSQRPTFKQLVEDLDRI 298
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGP---KGEKLLVFDYM 366
++VAVK L+ T K + SE+ ++ I +H N++ L LG G ++ +Y
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL----LGACTQDGPLYVIVEYA 101
Query: 367 PHGSLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
G+L +L AR PE + + + RG+ +L S + IH +
Sbjct: 102 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRD 160
Query: 414 LTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
L + NVL+ + KI+DFGL+R + + + APE + ++DV
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 220
Query: 473 YSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
+S GV + E+ T L G+ P + EE + + M +EL
Sbjct: 221 WSFGVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMM 269
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ H V PS RP Q+V+ L+ I
Sbjct: 270 MRDCWHAV---PSQRPTFKQLVEDLDRI 294
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 134/286 (46%), Gaps = 36/286 (12%)
Query: 295 MGKSTYGTVYKATL------EDGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ E ++VA+K + E + +R EF +E S++ + +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGP---ETPIDWP---TRMKIIKG-MTRG 399
L + +G+ L++ + M G L ++L + P P+ P ++M + G + G
Sbjct: 83 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++N+ +H +L + N ++ + KI DFG++R + + + +P
Sbjct: 141 MAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +DV+S GV + E+ T + P + L+ ++ ++ V +
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 247
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL-EEIRP 562
L+ D L +++ C +P RP L+++ + EE+ P
Sbjct: 248 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP 290
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGP---KGEKLLVFDYM 366
++VAVK L+ T K + SE+ ++ I +H N++ L LG G ++ +Y
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL----LGACTQDGPLYVIVEYA 108
Query: 367 PHGSLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGN 413
G+L +L AR PE + + + RG+ +L S + IH +
Sbjct: 109 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRD 167
Query: 414 LTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDV 472
L + NVL+ + KI+DFGL+R + + + APE + ++DV
Sbjct: 168 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 227
Query: 473 YSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNT 532
+S GV + E+ T L G+ P + EE + + M +EL
Sbjct: 228 WSFGVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMM 276
Query: 533 LKLALHCVDPSPSARPEVLQVVQQLEEI 560
++ H V PS RP Q+V+ L+ I
Sbjct: 277 MRDCWHAV---PSQRPTFKQLVEDLDRI 301
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 158
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 159 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPG 236
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNAMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 308 LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL---GPKGEKLLVFD 364
L DG A+KR+ + + E + E + HPN+L L AY L G K E L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 365 YMPHGSLAT---FLHARG---PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSN 418
+ G+L L +G E I W ++ G+ RGL +H+ + H +L +N
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEAIHA-KGYAHRDLKPTN 164
Query: 419 VLLDDSTNAKISDFG--------LSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK---AN 467
+LL D + D G + + YRAPEL ++ +
Sbjct: 165 ILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID 224
Query: 468 TKTDVYSLGVTILELLTGKSP 488
+TDV+SLG + ++ G+ P
Sbjct: 225 ERTDVWSLGCVLYAMMFGEGP 245
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 152
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPG 230
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 32/265 (12%)
Query: 312 SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYMPHG 369
++VAVK L+ T K + SE+ ++ I +H N++ L G ++ +Y G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 119
Query: 370 SLATFLHAR-------------GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTS 416
+L +L AR PE + + + RG+ +L S + IH +L +
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAA 178
Query: 417 SNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSL 475
NVL+ + KI+DFGL+R + + + APE + ++DV+S
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 476 GVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKL 535
GV + E+ T L G+ P + EE + + M +EL ++
Sbjct: 239 GVLLWEIFT-------LGGSPYP----GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD 287
Query: 536 ALHCVDPSPSARPEVLQVVQQLEEI 560
H V PS RP Q+V+ L+ I
Sbjct: 288 CWHAV---PSQRPTFKQLVEDLDRI 309
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 12 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 63 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 119 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 158
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DFGL+R YRAPE+ N
Sbjct: 159 HRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPG 236
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 12 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 63 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 119 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRA 350
+GK + V A + G +VA+K + + T Q+ F EV ++ + HPN++ L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL-- 79
Query: 351 YYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + EK L+ +Y G + +L A G + ++ + I + + H +
Sbjct: 80 -FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI---VSAVQYCH-QKR 134
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
I+H +L + N+LLD N KI+DFG S Y APEL + KK +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP--YAAPELFQGKKYDG 192
Query: 469 -KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ DV+SLGV + L++G P + N EL + V
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 10 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 61 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 116
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 117 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 12 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 63 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 119 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 12 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 63 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 119 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 12 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 63 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 119 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNL 345
+++GK T+G V KAT G A+K L++++ + E +E +L RHP L
Sbjct: 15 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 72 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAE-IVSALDYLHS 127
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+N+++ +L N++LD + KI+DFGL + Y APE+ +
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 295 MGKSTYGTVYKATL-----EDGS-QVAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL 346
+G +G V +AT ED +VAVK L+ ++E SE+ ++ + +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 347 ALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
L LG G L++ +Y +G L FL + D + TR LLH
Sbjct: 114 NL----LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 404 HS----------NENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXX 452
S ++N IH ++ + NVLL + AKI DFGL+R +M
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 453 LGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
+ + APE ++DV+S G+ + E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 12 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 63 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 119 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNL 345
+++GK T+G V KAT G A+K L++++ + E +E +L RHP L
Sbjct: 14 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 71 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAE-IVSALDYLHS 126
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+N+++ +L N++LD + KI+DFGL + Y APE+ +
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNL 345
+++GK T+G V KAT G A+K L++++ + E +E +L RHP L
Sbjct: 16 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 73 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAE-IVSALDYLHS 128
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+N+++ +L N++LD + KI+DFGL + Y APE+ +
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLR-----EKITKGQREFESEVSLLGKIRHPNLL 346
E +G+ TYGTV+KA E VA+KR+R E + E+ LL +++H N++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIV 64
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG----MTRGLLH 402
L L + LVF++ F G P +I+K + +GL
Sbjct: 65 RLHDV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-------EIVKSFLFQLLKGLGF 116
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LS 461
HS N++H +L N+L++ + K+++FGL+R L YR P+ L
Sbjct: 117 CHS-RNVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDVLF 174
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE 496
K +T D++S G EL P P N +
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 37/226 (16%)
Query: 294 IMGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALR 349
++G+ +G V KA D A+K++R EK++ SEV LL + H ++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST----ILSEVMLLASLNHQYVVRYY 68
Query: 350 AYYL------------GPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMT 397
A +L K + +Y +G+L +H+ D R+ + +
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL--FRQIL 126
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG--- 454
L ++HS + IIH +L N+ +D+S N KI DFGL++ + G
Sbjct: 127 EALSYIHS-QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 455 ----------YRAPE-LSKLKKANTKTDVYSLGVTILELLTGKSPG 489
Y A E L N K D+YSLG+ E++ S G
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI D+GL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNL 345
+++GK T+G V KAT G A+K L++++ + E +E +L RHP L
Sbjct: 154 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 211 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAE-IVSALDYLHS 266
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+N+++ +L N++LD + KI+DFGL + Y APE+ +
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRA 350
+GK + V A + G +VA+K + + T Q+ F EV ++ + HPN++ L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL-- 76
Query: 351 YYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + EK L+ +Y G + +L A G + ++ + I + + H +
Sbjct: 77 -FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI---VSAVQYCH-QKR 131
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
I+H +L + N+LLD N KI+DFG S Y APEL + KK +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP--YAAPELFQGKKYDG 189
Query: 469 -KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ DV+SLGV + L++G P + N EL + V
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 223
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVK---RLREKITKGQREFESEVSLLGKIRHPNLLALRA 350
+GK + V A + G +VAVK + + T Q+ F EV ++ + HPN++ L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL-- 79
Query: 351 YYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + EK LV +Y G + +L A G + + + I + + H +
Sbjct: 80 -FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAVQYCHQ-KY 134
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
I+H +L + N+LLD N KI+DFG S Y APEL + KK +
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPP--YAAPELFQGKKYDG 192
Query: 469 -KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ DV+SLGV + L++G P + N EL + V
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNL 345
+++GK T+G V KAT G A+K L++++ + E +E +L RHP L
Sbjct: 157 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 214 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAE-IVSALDYLHS 269
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+N+++ +L N++LD + KI+DFGL + Y APE+ +
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 295 MGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ + G V AT+ G VAVK++ + + + +EV ++ +H N++ + YL
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 354 GPKGEKL-LVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
G++L +V +++ G+L + H R E I + + + L LH+ + +IH
Sbjct: 99 --VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHA-QGVIH 150
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S ++LL K+SDFG + + APEL + D
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 209
Query: 472 VYSLGVTILELLTGKSP 488
++SLG+ ++E++ G+ P
Sbjct: 210 IWSLGIMVIEMVDGEPP 226
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 11 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 62 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 118 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 293 EIMGKSTYGTVY--KATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRA 350
E++G + V+ K L G A+K +++ E+E+++L KI+H N++ L
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y LV + G L + RG T D +I+ + + +LH N I+
Sbjct: 74 IY-ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHEN-GIV 128
Query: 411 HGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
H +L N+L ++++ I+DFGLS++ GY APE+ K +
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP---GYVAPEVLAQKPYS 185
Query: 468 TKTDVYSLGVTILELLTGKSP 488
D +S+GV LL G P
Sbjct: 186 KAVDCWSIGVITYILLCGYPP 206
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V + ++ G ++AVK+L + I +R + E+ LL ++H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL-- 115
Query: 351 YYLGPKGEKLLVFDYMPHGSLATF------LHARGPE-------TPIDWPTRMKIIKGMT 397
L VF P SL F H G + + +I +
Sbjct: 116 ---------LDVF--TPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 164
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRA 457
RGL ++HS +IIH +L SN+ +++ KI DFGL+R YRA
Sbjct: 165 RGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 219
Query: 458 PELS-KLKKANTKTDVYSLGVTILELLTGKS--PG 489
PE+ N D++S+G + ELLTG++ PG
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLRE-----KITKGQREFES------EVSLLGKI 340
+ +G+ YG V Q+AV R+ E KI +R + E+ + +
Sbjct: 12 VQTLGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ + G + E + + ++ + S P+ + P + + G+
Sbjct: 63 NHENVVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 401 LHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPE 459
++LH I H ++ N+LLD+ N KISDFGL+ + L Y APE
Sbjct: 119 VYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 460 LSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
L K ++ + + DV+S G+ + +L G+ P +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 295 MGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ + G V AT+ G VAVK++ + + + +EV ++ +H N++ + YL
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 354 GPKGEKL-LVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
G++L +V +++ G+L + H R E I + + + L LH+ + +IH
Sbjct: 97 --VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHA-QGVIH 148
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S ++LL K+SDFG + + APEL + D
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 207
Query: 472 VYSLGVTILELLTGKSP 488
++SLG+ ++E++ G+ P
Sbjct: 208 IWSLGIMVIEMVDGEPP 224
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPN 344
E +G + V K + G + A K ++++ R E E EV++L +IRHPN
Sbjct: 17 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 76
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
++ L + K + +L+ + + G L FL + T D T+ +K + G+ +LH
Sbjct: 77 IITLHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTE-DEATQF--LKQILDGVHYLH 132
Query: 405 SNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL 460
S + I H +L N++L D K+ DFG++ + + APE+
Sbjct: 133 S-KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE--FVAPEI 189
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 295 MGKSTYGTVYKATLED------GSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ D ++VAVK + E + +R EF +E S++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGMTRG 399
L + KG+ L+V + M HG L ++L + PE P +++ + G
Sbjct: 85 LLG--VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++ + +H +L + N ++ KI DFG++R + + + AP
Sbjct: 143 MAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +D++S GV + E+ + + P + L+ ++ ++ V D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
+ + + + +++ C +P RP L++V L++
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 295 MGKSTYGTVYKATLED----GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 76
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 77 ---IGVITENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES-K 130
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 468 TKTDVYSLGVTILELLT-GKSP----------GEPLNGAELP 498
+ +DV+ GV + E+L G P G NG LP
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 130/282 (46%), Gaps = 35/282 (12%)
Query: 295 MGKSTYGTVYKATLED------GSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ D ++VAVK + E + +R EF +E S++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGMTRG 399
L + KG+ L+V + M HG L ++L + PE P +++ + G
Sbjct: 85 LLG--VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++ + +H +L + N ++ KI DFG++R + + + AP
Sbjct: 143 MAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +D++S GV + E+ + + P + L+ ++ ++ V D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
+ + + + +++ C +P+ RP L++V L++
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPN 344
E +G + V K + G + A K ++++ R E E EV++L +IRHPN
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
++ L + K + +L+ + + G L FL + T D T + +K + G+ +LH
Sbjct: 91 IITLHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTE-DEAT--QFLKQILDGVHYLH 146
Query: 405 SNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL 460
S + I H +L N++L D K+ DFG++ + + APE+
Sbjct: 147 S-KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE--FVAPEI 203
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 295 MGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ + G V AT+ G VAVK++ + + + +EV ++ +H N++ + YL
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 354 GPKGEKL-LVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
G++L +V +++ G+L + H R E I + + + L LH+ + +IH
Sbjct: 219 --VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHA-QGVIH 270
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S ++LL K+SDFG + + APEL + D
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 329
Query: 472 VYSLGVTILELLTGKSP 488
++SLG+ ++E++ G+ P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPN 344
E +G + V K + G + A K ++++ R E E EV++L +IRHPN
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
++ L + K + +L+ + + G L FL + T D T + +K + G+ +LH
Sbjct: 70 IITLHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTE-DEAT--QFLKQILDGVHYLH 125
Query: 405 SNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL 460
S + I H +L N++L D K+ DFG++ + + APE+
Sbjct: 126 S-KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE--FVAPEI 182
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 295 MGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ + G V AT+ G VAVK++ + + + +EV ++ +H N++ + YL
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 354 GPKGEKL-LVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
G++L +V +++ G+L + H R E I + + + L LH+ + +IH
Sbjct: 88 --VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHA-QGVIH 139
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S ++LL K+SDFG + + APEL + D
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 198
Query: 472 VYSLGVTILELLTGKSP 488
++SLG+ ++E++ G+ P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 44/214 (20%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVS---------LLGKIRHPN 344
+G YG+V A G +VA+K+L R F+SE+ LL ++H N
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-------SRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 345 LL----------ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK 394
++ +LR +Y + LV +M L + + E I + ++
Sbjct: 85 VIGLLDVFTPASSLRNFY-----DFYLVMPFM-QTDLQKIMGLKFSEEKIQY-----LVY 133
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG 454
M +GL ++HS ++H +L N+ +++ KI DFGL+R
Sbjct: 134 QMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRW 188
Query: 455 YRAPE-LSKLKKANTKTDVYSLGVTILELLTGKS 487
YRAPE + N D++S+G + E+LTGK+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 295 MGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ + G V AT+ G VAVK++ + + + +EV ++ +H N++ + YL
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 354 GPKGEKL-LVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
G++L +V +++ G+L + H R E I + + + L LH+ + +IH
Sbjct: 142 --VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHA-QGVIH 193
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S ++LL K+SDFG + + APEL + D
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 252
Query: 472 VYSLGVTILELLTGKSP 488
++SLG+ ++E++ G+ P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALR-AY 351
+G G V+K + + G +A K + +I R + E+ +L + P ++ A+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y GE + ++M GSL L G PE I + +IKG+T +L I
Sbjct: 74 Y--SDGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKI 126
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ SN+L++ K+ DFG+S + Y +PE + + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQ 183
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAEL 497
+D++S+G++++E+ G+ P P + EL
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQ------REFESEVSLLGKIRHPNLLA 347
+GK + V A + G +VAVK I K Q ++ EV ++ + HPN++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 348 LRAYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
L + + EK LV +Y G + +L A G + + + I + + H
Sbjct: 78 L---FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAVQYCHQ 131
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+ I+H +L + N+LLD N KI+DFG S Y APEL + KK
Sbjct: 132 -KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPP--YAAPELFQGKK 188
Query: 466 ANT-KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ + DV+SLGV + L++G P + N EL + V
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 295 MGKSTYGTVYKATLED------GSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ D ++VAVK + E + +R EF +E S++ +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGMTRG 399
L + KG+ L+V + M HG L ++L + PE P +++ + G
Sbjct: 84 LLG--VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++ + +H +L + N ++ KI DFG++R + + + AP
Sbjct: 142 MAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +D++S GV + E+ + + P + L+ ++ ++ V D
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 248
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
+ + + + +++ C +P RP L++V L++
Sbjct: 249 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 287
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 295 MGKSTYGTVYKATLED------GSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ D ++VAVK + E + +R EF +E S++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGMTRG 399
L + KG+ L+V + M HG L ++L + PE P +++ + G
Sbjct: 85 LLG--VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++ + +H +L + N ++ KI DFG++R + + + AP
Sbjct: 143 MAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +D++S GV + E+ + + P + L+ ++ ++ V D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
+ + + + +++ C +P RP L++V L++
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALR-AY 351
+G G V+K + + G +A K + +I R + E+ +L + P ++ A+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y GE + ++M GSL L G PE I + +IKG+T +L I
Sbjct: 74 Y--SDGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKI 126
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ SN+L++ K+ DFG+S + Y +PE + + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQ 183
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAEL 497
+D++S+G++++E+ G+ P P + EL
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 295 MGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ + G V AT+ G VAVK++ + + + +EV ++ +H N++ + YL
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 354 GPKGEKL-LVFDYMPHGSLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
G++L +V +++ G+L + H R E I + + + L LH+ + +IH
Sbjct: 92 --VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHA-QGVIH 143
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTD 471
++ S ++LL K+SDFG + + APEL + D
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 202
Query: 472 VYSLGVTILELLTGKSP 488
++SLG+ ++E++ G+ P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALR-AY 351
+G G V+K + + G +A K + +I R + E+ +L + P ++ A+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y GE + ++M GSL L G PE I + +IKG+T +L I
Sbjct: 74 Y--SDGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKI 126
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ SN+L++ K+ DFG+S + Y +PE + + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQ 183
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAEL 497
+D++S+G++++E+ G+ P P + EL
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALR-AY 351
+G G V+K + + G +A K + +I R + E+ +L + P ++ A+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y GE + ++M GSL L G PE I + +IKG+T +L I
Sbjct: 74 Y--SDGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKI 126
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ SN+L++ K+ DFG+S + Y +PE + + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQ 183
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAEL 497
+D++S+G++++E+ G+ P P + EL
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 295 MGKSTYGTVYKATLED----GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 76
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 77 ---IGVITENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES-K 130
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 468 TKTDVYSLGVTILELL 483
+ +DV+ GV + E+L
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 295 MGKSTYGTVYKATLED------GSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ D ++VAVK + E + +R EF +E S++ +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGMTRG 399
L KG+ L+V + M HG L ++L + PE P +++ + G
Sbjct: 82 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++ + +H +L + N ++ KI DFG++R + + + AP
Sbjct: 140 MAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +D++S GV + E+ + + P + L+ ++ ++ V D
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 246
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
+ + + + +++ C +P RP L++V L++
Sbjct: 247 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 285
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 295 MGKSTYGTVYKATLED------GSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLA 347
+G+ ++G VY+ D ++VAVK + E + +R EF +E S++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 348 LRAYYLGPKGE-KLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGMTRG 399
L KG+ L+V + M HG L ++L + PE P +++ + G
Sbjct: 85 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAP 458
+ +L++ + +H +L + N ++ KI DFG++R + + + AP
Sbjct: 143 MAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 459 ELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517
E K T +D++S GV + E+ + + P + L+ ++ ++ V D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
+ + + + +++ C +P RP L++V L++
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 295 MGKSTYGTVYKATL-EDGSQVAVKRLREKITK---GQREFESEVSLLGKIRHPNLLALRA 350
+G YG V A G++VA+K+L +R + E+ LL +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLD 91
Query: 351 YY-----LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L + LV +M H + E I + ++ M +GL ++H+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYIHA 146
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE--LSKL 463
IIH +L N+ +++ KI DFGL+R YRAPE L+ +
Sbjct: 147 A-GIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSEMXGXVVTRWYRAPEVILNWM 201
Query: 464 KKANTKTDVYSLGVTILELLTGKS 487
+ T D++S+G + E++TGK+
Sbjct: 202 RYTQT-VDIWSVGCIMAEMITGKT 224
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 295 MGKSTYGTVYKATLED----GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 76
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 77 ---IGVITENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES-K 130
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 468 TKTDVYSLGVTILELL 483
+ +DV+ GV + E+L
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQ------REFESEVSLLGKIRHPNLLA 347
+GK + V A + G +VAVK I K Q ++ EV ++ + HPN++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L + + LV +Y G + +L A G + + + I + + H +
Sbjct: 78 LFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAVQYCHQ-K 132
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
I+H +L + N+LLD N KI+DFG S Y APEL + KK +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP--YAAPELFQGKKYD 190
Query: 468 T-KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ DV+SLGV + L++G P + N EL + V
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 44/214 (20%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVS---------LLGKIRHPN 344
+G YG+V A G +VA+K+L R F+SE+ LL ++H N
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-------SRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 345 LL----------ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIK 394
++ +LR +Y + LV +M L + E I + ++
Sbjct: 103 VIGLLDVFTPASSLRNFY-----DFYLVMPFM-QTDLQKIMGMEFSEEKIQY-----LVY 151
Query: 395 GMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG 454
M +GL ++HS ++H +L N+ +++ KI DFGL+R
Sbjct: 152 QMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRW 206
Query: 455 YRAPE-LSKLKKANTKTDVYSLGVTILELLTGKS 487
YRAPE + N D++S+G + E+LTGK+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 81
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 82 ---IGVITENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES-K 135
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 468 TKTDVYSLGVTILELL 483
+ +DV+ GV + E+L
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALRAYY 352
+G G V+K + + G +A K + +I R + E+ +L + P ++ +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
GE + ++M GSL L G PE I + +IKG+T +L I+
Sbjct: 136 YS-DGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKIM 189
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
H ++ SN+L++ K+ DFG+S + Y +PE + + ++
Sbjct: 190 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQS 246
Query: 471 DVYSLGVTILELLTGKSPGEPLNGAEL 497
D++S+G++++E+ G+ P P + EL
Sbjct: 247 DIWSMGLSLVEMAVGRYPIPPPDAKEL 273
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI DF L+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 104
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 105 ---IGVITENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES-K 158
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 468 TKTDVYSLGVTILELL 483
+ +DV+ GV + E+L
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 79
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 80 ---IGVITENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES-K 133
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 468 TKTDVYSLGVTILELL 483
+ +DV+ GV + E+L
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 73
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 74 ---IGVITENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES-K 127
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 468 TKTDVYSLGVTILELL 483
+ +DV+ GV + E+L
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 295 MGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 76
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 77 ---IGVITENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES-K 130
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 468 TKTDVYSLGVTILELLT-GKSP----------GEPLNGAELP 498
+ +DV+ GV + E+L G P G NG LP
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 232
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 295 MGKSTYGTVYKATLEDGSQ----VAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 78
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 79 ---IGVITENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES-K 132
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 468 TKTDVYSLGVTILELL 483
+ +DV+ GV + E+L
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQ------REFESEVSLLGKIRHPNLLA 347
+GK + V A + G +VAVK I K Q ++ EV ++ + HPN++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L + + LV +Y G + +L A G + + + I + + H +
Sbjct: 78 LFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAVQYCHQ-K 132
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
I+H +L + N+LLD N KI+DFG S Y APEL + KK +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP--YAAPELFQGKKYD 190
Query: 468 T-KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ DV+SLGV + L++G P + N EL + V
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
E+ + +G V+KA L + VAVK + K + E EV L ++H N+L +
Sbjct: 30 EVKARGRFGCVWKAQLLN-EYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQ----F 83
Query: 353 LGPKG-------EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+G + + L+ + GSL+ FL A + W I + M RGL +LH
Sbjct: 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE 139
Query: 406 N---------ENIIHGNLTSSNVLLDDSTNAKISDFGLS-RLMXXXXXXXXXXXXXXLGY 455
+ I H ++ S NVLL ++ A I+DFGL+ + Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 456 RAPE-----LSKLKKANTKTDVYSLGVTILELLTGKSPGE-PLNGAELP 498
APE ++ + A + D+Y++G+ + EL + + + P++ LP
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP 248
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF-ESEVSLLGKIRHPNLLAL 348
A E +GK YG V++ L G VAVK + Q F E+E+ +RH N+L
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSSR--DEQSWFRETEIYNTVLLRHDNILGF 67
Query: 349 RAYYLGPKG---EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH- 404
A + + + L+ Y HGSL FL + E + +++ GL HLH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL----ALRLAVSAACGLAHLHV 123
Query: 405 ------SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---Y 455
I H + S NVL+ + I+D GL+ + +G Y
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 456 RAPEL------SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW 509
APE+ + ++ TD+++ G+ + E+ + P +V +
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPP--FYDVVPNDP 241
Query: 510 TNEVFDLELMRD--APTI-----GDELLNTL-KLALHCVDPSPSARPEVLQVVQQLEEI 560
+ E + D PTI D +L+ L ++ C P+PSAR L++ + L++I
Sbjct: 242 SFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKI 300
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 295 MGKSTYGTVYKATLED----GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 456
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 457 ---IGVITENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES-K 510
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 468 TKTDVYSLGVTILELLT-GKSP----------GEPLNGAELP 498
+ +DV+ GV + E+L G P G NG LP
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 612
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 48/242 (19%)
Query: 292 AEIMGKSTYGTVYKATLEDGS------QVAVKRLREKITKGQRE-FESEVSLLGKI-RHP 343
+++G +G V AT S QVAVK L+EK +RE SE+ ++ ++ H
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 344 NLLALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP---ETPIDWPTR-------- 389
N++ L LG G L+F+Y +G L +L ++ E I++ +
Sbjct: 110 NIVNL----LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 390 -------------MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436
++ KGM L S +H +L + NVL+ KI DFGL+R
Sbjct: 166 LNVLTFEDLLCFAYQVAKGME--FLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 437 -LMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT---GKSPGEPL 492
+M + + APE K+DV+S G+ + E+ + PG P+
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280
Query: 493 NG 494
+
Sbjct: 281 DA 282
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 36/242 (14%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQRE-FE----SEVSLLGKIRHPNLLAL 348
+G+ T+G V+KA + G +VA+K++ + + ++E F E+ +L ++H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 349 -------RAYYLGPKGEKLLVFDYMPH---GSLATFLHARGPETPIDWPTRMKIIKGMTR 398
+ Y KG LVFD+ H G L+ L ++++ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN 136
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR---LMXXXXXXXXXXXXXXLGY 455
GL ++H N+ I+H ++ ++NVL+ K++DFGL+R L L Y
Sbjct: 137 GLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 456 RAPE-LSKLKKANTKTDVYSLGVTILELLTGKSP-----GEPLNGAELPQWVASIVKEEW 509
R PE L + D++ G + E+ T +SP E A + Q SI E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 510 TN 511
N
Sbjct: 255 PN 256
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALR-AY 351
+G G V+K + + G +A K + +I R + E+ +L + P ++ A+
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y GE + ++M GSL L G PE I + +IKG+T +L I
Sbjct: 101 Y--SDGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKI 153
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ SN+L++ K+ DFG+S + Y +PE + + +
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQ 210
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAEL 497
+D++S+G++++E+ G+ P P + EL
Sbjct: 211 SDIWSMGLSLVEMAVGRYPIPPPDAKEL 238
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGS----QVAVKRLREKIT---KGQREFESEVSLLGKIRHPNL 345
E +G ++G V + + S VAVK L+ + + +F EV+ + + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L L P + +V + P GSL L + +R + + G+ +L S
Sbjct: 78 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 133
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKL 463
+ IH +L + N+LL KI DFGL R + + APE K
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 464 KKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + +D + GVT+ E+ T G+ P LNG+++
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 227
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 295 MGKSTYGTVYKATLED----GSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALR 349
+G+ +G V++ VA+K + + RE F E + + HP+++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 456
Query: 350 AYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+G E ++ + G L +FL R + +D + + ++ L +L S +
Sbjct: 457 ---IGVITENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES-K 510
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+H ++ + NVL+ + K+ DFGLSR M + + APE ++
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 468 TKTDVYSLGVTILELLT-GKSP----------GEPLNGAELP 498
+ +DV+ GV + E+L G P G NG LP
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 612
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 311 GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF-DYMPHG 369
G QVAVK + + + + +EV ++ +H N++ + YL GE+L V +++ G
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL--VGEELWVLMEFLQGG 127
Query: 370 SLATFL-HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAK 428
+L + R E I + + + + L +LH+ + +IH ++ S ++LL K
Sbjct: 128 ALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLHA-QGVIHRDIKSDSILLTLDGRVK 181
Query: 429 ISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
+SDFG + + APE+ T+ D++SLG+ ++E++ G+ P
Sbjct: 182 LSDFGFCAQISKDVPKRKXLVGTPY-WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 333 EVSLLGKIRHPNLLALR-AYYLGPKGEKLLVFDYMPHGSLATFLH--ARGPETPIDWPTR 389
E+ +L + P ++ A+Y GE + ++M GSL L R PE +
Sbjct: 64 ELQVLHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKEAKRIPEEILG---- 117
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
K+ + RGL +L I+H ++ SN+L++ K+ DFG+S +
Sbjct: 118 -KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 176
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAEL 497
Y APE + + ++D++S+G++++EL G+ P P + EL
Sbjct: 177 RS---YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 293 EIMGKSTYGTVYKATL-EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
EI + +G V+KA L D V + L++K + + E E+ ++H NLL A
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQS---WQSEREIFSTPGMKHENLLQFIA- 76
Query: 352 YLGPKGEKL-----LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
+G L L+ + GSL +L I W + + M+RGL +LH +
Sbjct: 77 -AEKRGSNLEVELWLITAFHDKGSLTDYLKG----NIITWNELCHVAETMSRGLSYLHED 131
Query: 407 ----------ENIIHGNLTSSNVLLDDSTNAKISDFGLS-RLMXXXXXXXXXXXXXXLGY 455
+I H + S NVLL A ++DFGL+ R Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 456 RAPE-----LSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELP--QWVASIVKE 507
APE ++ + A + D+Y++G+ + EL++ K+ P++ LP + +
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSL 251
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCV 540
E EV + MR PTI D L LA CV
Sbjct: 252 EELQEVVVHKKMR--PTIKDHWLKHPGLAQLCV 282
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQ------REFESEVSLLGKIRHPNLLA 347
+GK + V A + G +VAVK I K Q ++ EV ++ + HPN++
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L + + LV +Y G + +L A G + + + I + + H +
Sbjct: 71 LFEV-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI---VSAVQYCHQ-K 125
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
I+H +L + N+LLD N KI+DFG S Y APEL + KK +
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP--YAAPELFQGKKYD 183
Query: 468 T-KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ DV+SLGV + L++G P + N EL + V
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGS----QVAVKRLREKIT---KGQREFESEVSLLGKIRHPNL 345
E +G ++G V + + S VAVK L+ + + +F EV+ + + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L L P + +V + P GSL L + +R + + G+ +L S
Sbjct: 78 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 133
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKL 463
+ IH +L + N+LL KI DFGL R + + APE K
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 464 KKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + +D + GVT+ E+ T G+ P LNG+++
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 227
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGS----QVAVKRLREKIT---KGQREFESEVSLLGKIRHPNL 345
E +G ++G V + + S VAVK L+ + + +F EV+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L L P + +V + P GSL L + +R + + G+ +L S
Sbjct: 74 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 129
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKL 463
+ IH +L + N+LL KI DFGL R + + APE K
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 464 KKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + +D + GVT+ E+ T G+ P LNG+++
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGS----QVAVKRLREKIT---KGQREFESEVSLLGKIRHPNL 345
E +G ++G V + + S VAVK L+ + + +F EV+ + + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L L P + +V + P GSL L + +R + + G+ +L S
Sbjct: 84 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 139
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKL 463
+ IH +L + N+LL KI DFGL R + + APE K
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 464 KKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + +D + GVT+ E+ T G+ P LNG+++
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGS----QVAVKRLREKIT---KGQREFESEVSLLGKIRHPNL 345
E +G ++G V + + S VAVK L+ + + +F EV+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L L P + +V + P GSL L + +R + + G+ +L S
Sbjct: 74 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 129
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKL 463
+ IH +L + N+LL KI DFGL R + + APE K
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 464 KKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + +D + GVT+ E+ T G+ P LNG+++
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 295 MGKSTYGTVYKATL-----EDGS-QVAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL 346
+G +G V +AT ED +VAVK L+ ++E SE+ ++ + +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 347 ALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
L LG G L++ +Y +G L FL + D + TR LLH
Sbjct: 114 NL----LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 404 HS----------NENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXX 452
S ++N IH ++ + NVLL + AKI DFGL+R +M
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 453 LGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
+ + APE ++DV+S G+ + E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGS----QVAVKRLREKIT---KGQREFESEVSLLGKIRHPNL 345
E +G ++G V + + S VAVK L+ + + +F EV+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L L P + +V + P GSL L + +R + + G+ +L S
Sbjct: 74 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 129
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKL 463
+ IH +L + N+LL KI DFGL R + + APE K
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 464 KKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + +D + GVT+ E+ T G+ P LNG+++
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 36/242 (14%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQRE-FE----SEVSLLGKIRHPNLLAL 348
+G+ T+G V+KA + G +VA+K++ + + ++E F E+ +L ++H N++ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 349 -------RAYYLGPKGEKLLVFDYMPH---GSLATFLHARGPETPIDWPTRMKIIKGMTR 398
+ Y KG LVFD+ H G L+ L ++++ +
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN 135
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR---LMXXXXXXXXXXXXXXLGY 455
GL ++H N+ I+H ++ ++NVL+ K++DFGL+R L L Y
Sbjct: 136 GLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 456 RAPE-LSKLKKANTKTDVYSLGVTILELLTGKSP-----GEPLNGAELPQWVASIVKEEW 509
R PE L + D++ G + E+ T +SP E A + Q SI E W
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVW 253
Query: 510 TN 511
N
Sbjct: 254 PN 255
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGS----QVAVKRLREKIT---KGQREFESEVSLLGKIRHPNL 345
E +G ++G V + + S VAVK L+ + + +F EV+ + + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L L P + +V + P GSL L + +R + + G+ +L S
Sbjct: 84 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 139
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKL 463
+ IH +L + N+LL KI DFGL R + + APE K
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 464 KKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + +D + GVT+ E+ T G+ P LNG+++
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRA 350
+GK + V A + G +VAV R+ +K + ++ EV ++ + HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL-- 78
Query: 351 YYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + EK LV +Y G + +L A G + + + I + + H +
Sbjct: 79 -FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAVQYCHQ-KF 133
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
I+H +L + N+LLD N KI+DFG S Y APEL + KK +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP--YAAPELFQGKKYDG 191
Query: 469 -KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ DV+SLGV + L++G P + N EL + V
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 36/242 (14%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQRE-FE----SEVSLLGKIRHPNLLAL 348
+G+ T+G V+KA + G +VA+K++ + + ++E F E+ +L ++H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 349 -------RAYYLGPKGEKLLVFDYMPH---GSLATFLHARGPETPIDWPTRMKIIKGMTR 398
+ Y KG LVFD+ H G L+ L ++++ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN 136
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR---LMXXXXXXXXXXXXXXLGY 455
GL ++H N+ I+H ++ ++NVL+ K++DFGL+R L L Y
Sbjct: 137 GLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 456 RAPE-LSKLKKANTKTDVYSLGVTILELLTGKSP-----GEPLNGAELPQWVASIVKEEW 509
R PE L + D++ G + E+ T +SP E A + Q SI E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 510 TN 511
N
Sbjct: 255 PN 256
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 333 EVSLLGKIRHPNLLALRAYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRM 390
EV ++ + HPN++ L + + EK LV +Y G + +L A G + +
Sbjct: 63 EVRIMKVLNHPNIVKL---FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXX 450
+ I + + H + I+H +L + N+LLD N KI+DFG S
Sbjct: 120 RQI---VSAVQYCHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGS 175
Query: 451 XXLGYRAPELSKLKKANT-KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
Y APEL + KK + + DV+SLGV + L++G P + N EL + V
Sbjct: 176 PP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 295 MGKSTYGTVYKATLEDGSQ--VAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
+G+ VY+ + G+Q A+K L++ + K + +E+ +L ++ HPN++ L+ +
Sbjct: 61 LGRGATSIVYRCK-QKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
P E LV + + G L + +G + D +K + + +LH N I+H
Sbjct: 118 ETPT-EISLVLELVTGGELFDRIVEKGYYSERD---AADAVKQILEAVAYLHEN-GIVHR 172
Query: 413 NLTSSNVLLDDSTNA-----KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+L N+L +T A KI+DFGLS+++ GY APE+ +
Sbjct: 173 DLKPENLLY--ATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP--GYCAPEILRGCAYG 228
Query: 468 TKTDVYSLGVTILELLTGKSP 488
+ D++S+G+ LL G P
Sbjct: 229 PEVDMWSVGIITYILLCGFEP 249
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPNL 345
E +G + V K + G + A K ++++ ++ R E E EVS+L ++ HPN+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L Y + + +L+ + + G L FL + + IK + G+ +LH+
Sbjct: 78 ITLHDVYEN-RTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 406 NENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS 461
+ I H +L N++L D + K+ DFGL+ + + APE+
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIV 190
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 10/203 (4%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQRE-FESEVSLLGKIRHPNLLA 347
+GK + Y+ T D +V ++ K + Q+E +E+++ + +P+++
Sbjct: 31 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
++ + V+ + + L + P ++ +G+ +LH+N
Sbjct: 91 FHGFF----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN- 145
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+IH +L N+ L+D + KI DFGL+ + Y APE+ K +
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP-NYIAPEVLCKKGHS 204
Query: 468 TKTDVYSLGVTILELLTGKSPGE 490
+ D++SLG + LL GK P E
Sbjct: 205 FEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI FGL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQ------REFESEVSLLGKIRHPNLLA 347
+GK + V A + G +VAVK I K Q ++ EV + + HPN++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIXKVLNHPNIVK 77
Query: 348 LRAYYLGPKGEK--LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
L + + EK LV +Y G + +L A G + + + I + + H
Sbjct: 78 L---FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI---VSAVQYCHQ 131
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+ I+H +L + N+LLD N KI+DFG S Y APEL + KK
Sbjct: 132 -KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPP--YAAPELFQGKK 188
Query: 466 ANT-KTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501
+ + DV+SLGV + L++G P + N EL + V
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 10/203 (4%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQRE-FESEVSLLGKIRHPNLLA 347
+GK + Y+ T D +V ++ K + Q+E +E+++ + +P+++
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
++ + V+ + + L + P ++ +G+ +LH+N
Sbjct: 107 FHGFF----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+IH +L N+ L+D + KI DFGL+ + Y APE+ K +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP-NYIAPEVLCKKGHS 220
Query: 468 TKTDVYSLGVTILELLTGKSPGE 490
+ D++SLG + LL GK P E
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 10/203 (4%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQRE-FESEVSLLGKIRHPNLLA 347
+GK + Y+ T D +V ++ K + Q+E +E+++ + +P+++
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
++ + V+ + + L + P ++ +G+ +LH+N
Sbjct: 107 FHGFF----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+IH +L N+ L+D + KI DFGL+ + Y APE+ K +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP-NYIAPEVLCKKGHS 220
Query: 468 TKTDVYSLGVTILELLTGKSPGE 490
+ D++SLG + LL GK P E
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLAL 348
+G YG+V Y A L +VAVK+L + + +R + E+ LL ++H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + Y+ + L+ + ++ + RGL ++HS
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA-G 151
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKAN 467
IIH +L SNV +++ + +I DFGL+R YRAPE+ N
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 468 TKTDVYSLGVTILELLTGKS--PG 489
D++S+G + ELL GK+ PG
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPG 231
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 294 IMGKSTYGTVYKATLED-GSQVAVKRL---REKITKGQREFESE---VSLLGKIRHPNLL 346
I+G+ +G VY D G A+K L R K+ +G+ +E +SL+ P ++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 347 ALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG-MTRGLLHLH 404
+ + P +KL + D M G L L G + D M+ + GL H+H
Sbjct: 256 CMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEAD----MRFYAAEIILGLEHMH 309
Query: 405 SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 463
N +++ +L +N+LLD+ + +ISD GL+ GY APE L K
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 464 KKANTKTDVYSLGVTILELLTGKSP 488
++ D +SLG + +LL G SP
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQRE-FESEVSLLGKIRHPNLLA 347
+GK + Y+ T D +V ++ K + Q+E +E+++ + +P+++
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
++ + V+ + + L + P ++ +G+ +LH+N
Sbjct: 107 FHGFF----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
+IH +L N+ L+D + KI DFGL+ + Y APE+ K +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP-NYIAPEVLCKKGHS 220
Query: 468 TKTDVYSLGVTILELLTGKSPGE 490
+ D++SLG + LL GK P E
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 18/191 (9%)
Query: 313 QVAVKRLRE-----KITKGQREFES------EVSLLGKIRHPNLLALRAYYLGPKGEKLL 361
Q+AV R+ E KI +R + E+ + + H N++ + G + E +
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK----FYGHRREGNI 78
Query: 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL 421
+ ++ + S P+ + P + + G+++LH I H ++ N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLL 137
Query: 422 DDSTNAKISDFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKKANTK-TDVYSLGVTI 479
D+ N KISDFGL+ + L Y APEL K ++ + + DV+S G+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 480 LELLTGKSPGE 490
+L G+ P +
Sbjct: 198 TAMLAGELPWD 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 295 MGKSTYGTVYK--ATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKIRHPNLLALRAY 351
+G+ TY TVYK + L D + VA+K +R + +G EVSLL ++H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
+ + LVF+Y+ L +L G I+ + + RGL + H + ++H
Sbjct: 69 -IHTEKSLTLVFEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCH-RQKVLH 123
Query: 412 GNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKKANTKT 470
+L N+L+++ K++DFGL+R L YR P+ L +T+
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 471 DVYSLGVTILELLTGK 486
D++ +G E+ TG+
Sbjct: 183 DMWGVGCIFYEMATGR 198
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 294 IMGKSTYGTVYKATLED-GSQVAVKRL---REKITKGQREFESE---VSLLGKIRHPNLL 346
I+G+ +G VY D G A+K L R K+ +G+ +E +SL+ P ++
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 347 ALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG-MTRGLLHLH 404
+ + P +KL + D M G L L G + D M+ + GL H+H
Sbjct: 255 CMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEAD----MRFYAAEIILGLEHMH 308
Query: 405 SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 463
N +++ +L +N+LLD+ + +ISD GL+ GY APE L K
Sbjct: 309 -NRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKG 364
Query: 464 KKANTKTDVYSLGVTILELLTGKSP 488
++ D +SLG + +LL G SP
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI D GL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 294 IMGKSTYGTVYKATLED-GSQVAVKRL---REKITKGQREFESE---VSLLGKIRHPNLL 346
I+G+ +G VY D G A+K L R K+ +G+ +E +SL+ P ++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 347 ALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG-MTRGLLHLH 404
+ + P +KL + D M G L L G + D M+ + GL H+H
Sbjct: 256 CMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEAD----MRFYAAEIILGLEHMH 309
Query: 405 SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 463
N +++ +L +N+LLD+ + +ISD GL+ GY APE L K
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 464 KKANTKTDVYSLGVTILELLTGKSP 488
++ D +SLG + +LL G SP
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 294 IMGKSTYGTVYKATLED-GSQVAVKRL---REKITKGQREFESE---VSLLGKIRHPNLL 346
I+G+ +G VY D G A+K L R K+ +G+ +E +SL+ P ++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 347 ALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG-MTRGLLHLH 404
+ + P +KL + D M G L L G + D M+ + GL H+H
Sbjct: 256 CMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEAD----MRFYAAEIILGLEHMH 309
Query: 405 SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 463
N +++ +L +N+LLD+ + +ISD GL+ GY APE L K
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 464 KKANTKTDVYSLGVTILELLTGKSP 488
++ D +SLG + +LL G SP
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 27/226 (11%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLALRA 350
++GK ++G V K Q ++ K + ++ + EV LL K+ HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
L +V + G L + R + D +IIK + G+ ++H + NI+
Sbjct: 89 I-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMHKH-NIV 143
Query: 411 HGNLTSSNVLLDD---STNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
H +L N+LL+ + KI DFGLS Y APE+ + +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY--YIAPEVLR-GTYD 200
Query: 468 TKTDVYSLGVTILELLTGKSPGEPLN-------------GAELPQW 500
K DV+S GV + LL+G P N +LPQW
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALR-AY 351
+G G V+K + + G +A K + +I R + E+ +L + P ++ A+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y GE + ++M GSL L G PE I + +IKG+T +L I
Sbjct: 74 Y--SDGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKI 126
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ SN+L++ K+ DFG+S + Y +PE + + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQ 183
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAE 496
+D++S+G++++E+ G+ P P + E
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI D GL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY- 352
+G+ YG V K + G +AVKR+R + Q + + L +R + +Y
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 353 -LGPKGEKLLVFDYMPHGSLATFLHA---RGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
L +G+ + + M SL F +G P D KI + + L HLHS +
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPED--ILGKIAVSIVKALEHLHSKLS 174
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS----KLK 464
+IH ++ SNVL++ K+ DFG+S + Y APE K
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP--YMAPERINPELNQK 232
Query: 465 KANTKTDVYSLGVTILELLTGKSP 488
+ K+D++SLG+T++EL + P
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFP 256
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 274 VHFDGPLMFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-----R 328
++F G T DDL + +G +G V+ L + ++R+ + I K +
Sbjct: 14 LYFQG----TIDDLFIFKRK-LGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPME 65
Query: 329 EFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFL---HARGPETPID 385
+ E+E+ +L + HPN++ + + +V + G L + ARG
Sbjct: 66 QIEAEIEVLKSLDHPNIIKIFEVFEDYHN-MYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 386 WPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXX 442
+ +++K M L + HS ++++H +L N+L D++ KI DFGL+ L
Sbjct: 125 YVA--ELMKQMMNALAYFHS-QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181
Query: 443 XXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
Y APE+ K + K D++S GV + LLTG P
Sbjct: 182 HSTNAAGTAL--YMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 128 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 186
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 187 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVS---LLGKIRHPNL 345
+++GK T+G V KAT G A+K LR+++ + E V+ +L RHP L
Sbjct: 16 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 73 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAE-IVSALEYLHS 128
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++++ ++ N++LD + KI+DFGL + Y APE+ +
Sbjct: 129 R-DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 130 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 130 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 27/226 (11%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLALRA 350
++GK ++G V K Q ++ K + ++ + EV LL K+ HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
L +V + G L + R + D +IIK + G+ ++H + NI+
Sbjct: 89 I-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARIIKQVFSGITYMHKH-NIV 143
Query: 411 HGNLTSSNVLLDD---STNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
H +L N+LL+ + KI DFGLS Y APE+ + +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY--YIAPEVLR-GTYD 200
Query: 468 TKTDVYSLGVTILELLTGKSPGEPLN-------------GAELPQW 500
K DV+S GV + LL+G P N +LPQW
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 27/226 (11%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFES---EVSLLGKIRHPNLLALRA 350
++GK ++G V K Q ++ K + ++ + EV LL K+ HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
L +V + G L + R + D +IIK + G+ ++H + NI+
Sbjct: 89 I-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARIIKQVFSGITYMHKH-NIV 143
Query: 411 HGNLTSSNVLLDD---STNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
H +L N+LL+ + KI DFGLS Y APE+ + +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY--YIAPEVLR-GTYD 200
Query: 468 TKTDVYSLGVTILELLTGKSPGEPLN-------------GAELPQW 500
K DV+S GV + LL+G P N +LPQW
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 22/231 (9%)
Query: 293 EIMGKSTYGTVYKATLEDGSQV-AVKRLREKITKGQREFES---EVSLLG-KIRHPNLLA 347
+++GK ++G V+ A + +Q A+K L++ + + E E +L HP L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+ + K V +Y+ G L + + D + GL LHS +
Sbjct: 84 MFCTF-QTKENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHS-K 138
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
I++ +L N+LLD + KI+DFG+ + Y APE+ +K N
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 468 TKTDVYSLGVTILELLTGKSPGEPLNGAEL-----------PQWVASIVKE 507
D +S GV + E+L G+SP + EL P+W+ K+
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 248
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVS---LLGKIRHPNL 345
+++GK T+G V KAT G A+K LR+++ + E V+ +L RHP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAE-IVSALEYLHS 123
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++++ ++ N++LD + KI+DFGL + Y APE+ +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 37/226 (16%)
Query: 294 IMGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALR 349
++G+ +G V KA D A+K++R EK++ SEV LL + H ++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST----ILSEVXLLASLNHQYVVRYY 68
Query: 350 AYYL------------GPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMT 397
A +L K + +Y + +L +H+ D R+ + +
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL--FRQIL 126
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG--- 454
L ++HS + IIH NL N+ +D+S N KI DFGL++ + G
Sbjct: 127 EALSYIHS-QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 455 ----------YRAPE-LSKLKKANTKTDVYSLGVTILELLTGKSPG 489
Y A E L N K D YSLG+ E + S G
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTG 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVS---LLGKIRHPNL 345
+++GK T+G V KAT G A+K LR+++ + E V+ +L RHP L
Sbjct: 14 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 71 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAE-IVSALEYLHS 126
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++++ ++ N++LD + KI+DFGL + Y APE+ +
Sbjct: 127 R-DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVS---LLGKIRHPNL 345
+++GK T+G V KAT G A+K LR+++ + E V+ +L RHP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAE-IVSALEYLHS 123
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++++ ++ N++LD + KI+DFGL + Y APE+ +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKI-TKGQREFESEVSLLGKIRHPNLLALRAYY 352
+G+ YG V K + G +AVKR+R + ++ Q+ ++ + +R + +Y
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI--SMRTVDCPFTVTFY 72
Query: 353 --LGPKGEKLLVFDYMPHGSLATFLHA---RGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
L +G+ + + M SL F +G P D KI + + L HLHS
Sbjct: 73 GALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPED--ILGKIAVSIVKALEHLHSKL 129
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRA-----PELSK 462
++IH ++ SNVL++ K+ DFG+S + Y A PEL++
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP--YMAPERINPELNQ 187
Query: 463 LKKANTKTDVYSLGVTILELLTGKSP 488
K + K+D++SLG+T++EL + P
Sbjct: 188 -KGYSVKSDIWSLGITMIELAILRFP 212
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALRA 350
+G YG+V A + G +VAVK+L + I +R + E+ LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ + + Y+ + L+ + +I + RGL ++HS +II
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-ADII 147
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKANTK 469
H +L SN+ +++ KI D GL+R YRAPE+ N
Sbjct: 148 HRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 470 TDVYSLGVTILELLTGKS--PG 489
D++S+G + ELLTG++ PG
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPG 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 295 MGKSTYGTVYKATL-----EDGS-QVAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL 346
+G +G V +AT ED +VAVK L+ ++E SE+ ++ + +H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 347 ALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGM 396
L LG G L++ +Y +G L FL + P++ + +
Sbjct: 106 NL----LGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 397 TRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGY 455
+G+ L S +N IH ++ + NVLL + AKI DFGL+R +M + +
Sbjct: 162 AQGMAFLAS-KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 220
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLT 484
APE ++DV+S G+ + E+ +
Sbjct: 221 MAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVS---LLGKIRHPNL 345
+++GK T+G V KAT G A+K LR+++ + E V+ +L RHP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAE-IVSALEYLHS 123
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++++ ++ N++LD + KI+DFGL + Y APE+ +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 114 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLAL 348
+G YG+V Y A L +VAVK+L + + +R + E+ LL ++H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + Y+ + L+ + ++ + RGL ++HS
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA-G 151
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKAN 467
IIH +L SNV +++ + +I DFGL+R YRAPE+ N
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 468 TKTDVYSLGVTILELLTGKS--PG 489
D++S+G + ELL GK+ PG
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPG 231
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 472 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 120 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 295 MGKSTYGTVYKATL-----EDGS-QVAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL 346
+G +G V +AT ED +VAVK L+ ++E SE+ ++ + +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 347 ALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGP---ETPIDWPTRMKIIKGMTRGL 400
L LG G L++ +Y +G L FL + P E + P+ + +R L
Sbjct: 114 NL----LGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYN-PSHNPEEQLSSRDL 168
Query: 401 LHLHS----------NENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXX 449
LH S ++N IH ++ + NVLL + AKI DFGL+R +M
Sbjct: 169 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
+ + APE ++DV+S G+ + E+ +
Sbjct: 229 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 473 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 531
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 532 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 44/292 (15%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL-A 347
A GK T Y D + VAVK L+ +RE SE+ +L + H N++
Sbjct: 33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 92
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG------------ 395
L A +G G L++ +Y +G L FL R ++ I T I++
Sbjct: 93 LGACTIG--GPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 396 ----MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
+ +G+ L S +N IH +L + N+LL KI DFGL+R +
Sbjct: 150 FSYQVAKGMAFLAS-KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKS--PGEPLNGAELPQWVASIVKE 507
+ + APE ++DV+S G+ + EL + G S PG P++ ++KE
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKE 263
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
F + AP E+ + +K C D P RP Q+VQ +E+
Sbjct: 264 G-----FRMLSPEHAPA---EMYDIMKT---CWDADPLKRPTFKQIVQLIEK 304
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 110 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 22/231 (9%)
Query: 293 EIMGKSTYGTVYKATLEDGSQV-AVKRLREKITKGQREFES---EVSLLG-KIRHPNLLA 347
+++GK ++G V+ A + +Q A+K L++ + + E E +L HP L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
+ + K V +Y+ G L + + D + GL LHS +
Sbjct: 83 MFCTF-QTKENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHS-K 137
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
I++ +L N+LLD + KI+DFG+ + Y APE+ +K N
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 468 TKTDVYSLGVTILELLTGKSPGEPLNGAEL-----------PQWVASIVKE 507
D +S GV + E+L G+SP + EL P+W+ K+
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVS----LLGKIRHPNLLA 347
+++GK ++G V A + + AVK L++K ++E + +S LL ++HP L+
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 348 LRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L ++ +KL V DY+ G L F H + ++ R + + L +LHS
Sbjct: 104 L--HFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAE-IASALGYLHS- 157
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
NI++ +L N+LLD + ++DFGL + Y APE+ +
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 467 NTKTDVYSLGVTILELLTGKSPGEPLNGAEL 497
+ D + LG + E+L G P N AE+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVS---LLGKIRHPNL 345
+++GK T+G V KAT G A+K LR+++ + E V+ +L RHP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAE-IVSALEYLHS 123
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++++ ++ N++LD + KI+DFGL + Y APE+ +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 12/215 (5%)
Query: 281 MFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ---REFESEVSLL 337
M ++ T++ +G+ + V + + Q + +K +GQ E E+++L
Sbjct: 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 82
Query: 338 GKIRH-PNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGM 396
+ P ++ L Y E +L+ +Y G + + E + +++IK +
Sbjct: 83 ELAKSCPRVINLHEVYENT-SEIILILEYAAGGEIFSLCLPELAEM-VSENDVIRLIKQI 140
Query: 397 TRGLLHLHSNENIIHGNLTSSNVLLDDST---NAKISDFGLSRLMXXXXXXXXXXXXXXL 453
G+ +LH N NI+H +L N+LL + KI DFG+SR +
Sbjct: 141 LEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE- 198
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
Y APE+ T TD++++G+ LLT SP
Sbjct: 199 -YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLAL 348
+G YG+V Y A L +VAVK+L + + +R + E+ LL ++H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + Y+ + L+ + ++ + RGL ++HS
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA-G 143
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-KLKKAN 467
IIH +L SNV +++ +I DFGL+R YRAPE+ N
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 468 TKTDVYSLGVTILELLTGKS--PG 489
D++S+G + ELL GK+ PG
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPG 223
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 293 EIMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVS---LLGKIRHPNL 345
+++GK T+G V KAT G A+K LR+++ + E V+ +L RHP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
AL+ Y V +Y G L F H + R + + L +LHS
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAE-IVSALEYLHS 123
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
++++ ++ N++LD + KI+DFGL + Y APE+ +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
D + LGV + E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 13/226 (5%)
Query: 294 IMGKSTYGTVYKATL-EDGSQVAVKRLREKITKGQREFE---SEVSLLGKIR-HPNLLAL 348
++GK ++G V A + E G AVK L++ + + E +E +L R HP L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ P V +++ G L H + + R + + L+ LH ++
Sbjct: 90 FCCFQTPD-RLFFVMEFVNGGDLM--FHIQKSRRFDEARARFYAAE-IISALMFLH-DKG 144
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L NVLLD + K++DFG+ + Y APE+ +
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAELPQWVAS--IVKEEWTNE 512
D +++GV + E+L G +P E N +L + + + +V W +E
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 294 IMGKSTYGTVYKA-TLEDGSQVAVKRLR---EKITKGQREFESEVSLLGKIRHPNLLALR 349
++G+ +G V KA D A+K++R EK++ SEV LL + H ++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST----ILSEVMLLASLNHQYVVRYY 68
Query: 350 AYYL------------GPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMT 397
A +L K + +Y + +L +H+ D R+ + +
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL--FRQIL 126
Query: 398 RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG--- 454
L ++HS + IIH +L N+ +D+S N KI DFGL++ + G
Sbjct: 127 EALSYIHS-QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 455 ----------YRAPE-LSKLKKANTKTDVYSLGVTILELLTGKSPG 489
Y A E L N K D+YSLG+ E++ S G
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 108 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 166
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 167 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
++++ ++ G+ +L + N +H +L + NVLL AKISDFGLS+ +
Sbjct: 114 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 450 XXX--LGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497
+ + APE K ++K+DV+S GV + E + G+ P + G+E+
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 42/274 (15%)
Query: 294 IMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFES------EVSLLGKIR----H 342
++GK +GTV+ L D QVA+K + G EV+LL K+ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 343 PNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLH 402
P ++ L ++ +G L++ +P L ++ +GP + P+R + + H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLG--EGPSRC-FFGQVVAAIQH 154
Query: 403 LHSNENIIHGNLTSSNVLLD-DSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE-L 460
HS ++H ++ N+L+D AK+ DFG L+ Y PE +
Sbjct: 155 CHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV---YSPPEWI 210
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520
S+ + V+SLG+ + +++ G P E E+ + EL
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFER------------------DQEILEAELHF 252
Query: 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVV 554
A D L C+ P PS+RP + +++
Sbjct: 253 PAHVSPD----CCALIRRCLAPKPSSRPSLEEIL 282
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 44/292 (15%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL-A 347
A GK T Y D + VAVK L+ +RE SE+ +L + H N++
Sbjct: 49 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 108
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG------------ 395
L A +G G L++ +Y +G L FL R ++ I T I++
Sbjct: 109 LGACTIG--GPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 396 ----MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
+ +G+ L S +N IH +L + N+LL KI DFGL+R +
Sbjct: 166 FSYQVAKGMAFLAS-KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKS--PGEPLNGAELPQWVASIVKE 507
+ + APE ++DV+S G+ + EL + G S PG P++ ++KE
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKE 279
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
F + AP E+ + +K C D P RP Q+VQ +E+
Sbjct: 280 G-----FRMLSPEHAPA---EMYDIMKT---CWDADPLKRPTFKQIVQLIEK 320
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 295 MGKSTYGTVYKATL-----EDGS-QVAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL 346
+G +G V +AT ED +VAVK L+ ++E SE+ ++ + +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 347 ALRAYYLGP---KGEKLLVFDYMPHGSLATFLHARGPET-------PIDWPTRMKIIKGM 396
L LG G L++ +Y +G L FL + P++ + +
Sbjct: 114 NL----LGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 397 TRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGY 455
+G+ L S +N IH ++ + NVLL + AKI DFGL+R +M + +
Sbjct: 170 AQGMAFLAS-KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 228
Query: 456 RAPELSKLKKANTKTDVYSLGVTILELLT 484
APE ++DV+S G+ + E+ +
Sbjct: 229 MAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 44/292 (15%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL-A 347
A GK T Y D + VAVK L+ +RE SE+ +L + H N++
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 115
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG------------ 395
L A +G G L++ +Y +G L FL R ++ I T I++
Sbjct: 116 LGACTIG--GPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 396 ----MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
+ +G+ L S +N IH +L + N+LL KI DFGL+R +
Sbjct: 173 FSYQVAKGMAFLAS-KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKS--PGEPLNGAELPQWVASIVKE 507
+ + APE ++DV+S G+ + EL + G S PG P++ ++KE
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKE 286
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
F + AP E+ + +K C D P RP Q+VQ +E+
Sbjct: 287 G-----FRMLSPEHAPA---EMYDIMKT---CWDADPLKRPTFKQIVQLIEK 327
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 150
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A+ +D+++LG I +L+ G P
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPP 233
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 44/292 (15%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL-A 347
A GK T Y D + VAVK L+ +RE SE+ +L + H N++
Sbjct: 51 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 110
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG------------ 395
L A +G G L++ +Y +G L FL R ++ I T I++
Sbjct: 111 LGACTIG--GPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 396 ----MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
+ +G+ L S +N IH +L + N+LL KI DFGL+R +
Sbjct: 168 FSYQVAKGMAFLAS-KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKS--PGEPLNGAELPQWVASIVKE 507
+ + APE ++DV+S G+ + EL + G S PG P++ ++KE
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKE 281
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
F + AP E+ + +K C D P RP Q+VQ +E+
Sbjct: 282 G-----FRMLSPEHAPA---EMYDIMKT---CWDADPLKRPTFKQIVQLIEK 322
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
E +GK YG V++ + + G VAVK + K E+E+ +RH N+L A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASD 100
Query: 353 LGPK---GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH----- 404
+ + + L+ Y GSL +L T +D + ++I+ + GL HLH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 405 --SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 459
I H +L S N+L+ + I+D GL+ + +G Y APE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 460 L------SKLKKANTKTDVYSLGVTILEL 482
+ + + D+++ G+ + E+
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALR 349
E +GK + V + + G + A K + K + ++ E E + K++HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ + LVFD + G L + AR + D I+ + + + HSN I
Sbjct: 72 DS-IQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHSN-GI 126
Query: 410 IHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H NL N+LL K++DFGL+ + GY +PE+ K
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
+ D+++ GV + LL G P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALR 349
E +GK + V + + G + A K + K + ++ E E + K++HPN++ L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ + LVFD + G L + AR + D I+ + + + HSN I
Sbjct: 71 DS-IQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHSN-GI 125
Query: 410 IHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H NL N+LL K++DFGL+ + GY +PE+ K
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
+ D+++ GV + LL G P
Sbjct: 184 SKPVDIWACGVILYILLVGYPP 205
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 102 L--YFCFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 155
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 156 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALR 349
E +GK + V + + G + A K + K + ++ E E + K++HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ + LVFD + G L + AR + D I+ + + + HSN I
Sbjct: 72 DS-IQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHSN-GI 126
Query: 410 IHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H NL N+LL K++DFGL+ + GY +PE+ K
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
+ D+++ GV + LL G P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 44/292 (15%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL-A 347
A GK T Y D + VAVK L+ +RE SE+ +L + H N++
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 115
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG------------ 395
L A +G G L++ +Y +G L FL R ++ I T I++
Sbjct: 116 LGACTIG--GPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 396 ----MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXX 450
+ +G+ L S +N IH +L + N+LL KI DFGL+R +
Sbjct: 173 FSYQVAKGMAFLAS-KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 451 XXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKS--PGEPLNGAELPQWVASIVKE 507
+ + APE ++DV+S G+ + EL + G S PG P++ ++KE
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKE 286
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559
F + AP E+ + +K C D P RP Q+VQ +E+
Sbjct: 287 G-----FRMLSPEHAPA---EMYDIMKT---CWDADPLKRPTFKQIVQLIEK 327
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 36/242 (14%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQRE-FE----SEVSLLGKIRHPNLLAL 348
+G+ T+G V+KA + G +VA+K++ + + ++E F E+ +L ++H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 349 -------RAYYLGPKGEKLLVFDYMPH---GSLATFLHARGPETPIDWPTRMKIIKGMTR 398
+ Y K LVFD+ H G L+ L ++++ +
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN 136
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR---LMXXXXXXXXXXXXXXLGY 455
GL ++H N+ I+H ++ ++NVL+ K++DFGL+R L L Y
Sbjct: 137 GLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 456 RAPE-LSKLKKANTKTDVYSLGVTILELLTGKSP-----GEPLNGAELPQWVASIVKEEW 509
R PE L + D++ G + E+ T +SP E A + Q SI E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 510 TN 511
N
Sbjct: 255 PN 256
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 332 SEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMK 391
+E +L K+ +++L AY K LV M G L ++ G +P
Sbjct: 233 NEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQ---AGFPEARA 288
Query: 392 IIKG--MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
+ + GL LH E I++ +L N+LLDD + +ISD GL+ +
Sbjct: 289 VFYAAEICCGLEDLH-RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR 345
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+GY APE+ K ++ D ++LG + E++ G+SP + + V +VKE
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 332 SEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMK 391
+E +L K+ +++L AY K LV M G L ++ G +P
Sbjct: 233 NEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQ---AGFPEARA 288
Query: 392 IIKG--MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXX 449
+ + GL LH E I++ +L N+LLDD + +ISD GL+ +
Sbjct: 289 VFYAAEICCGLEDLH-RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR 345
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE 507
+GY APE+ K ++ D ++LG + E++ G+SP + + V +VKE
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 150
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW 509
A +D+++LG I +L+ G P N + A I+K E+
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLI---FAKIIKLEY 251
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
E +GK YG V++ + + G VAVK + K E+E+ +RH N+L A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASD 71
Query: 353 LGPK---GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH----- 404
+ + + L+ Y GSL +L T +D + ++I+ + GL HLH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 405 --SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 459
I H +L S N+L+ + I+D GL+ + +G Y APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 460 L------SKLKKANTKTDVYSLGVTILEL 482
+ + + D+++ G+ + E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYY 352
E +GK YG V++ + + G VAVK + K E+E+ +RH N+L A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASD 71
Query: 353 LGPK---GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH----- 404
+ + + L+ Y GSL +L T +D + ++I+ + GL HLH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 405 --SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 459
I H +L S N+L+ + I+D GL+ + +G Y APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 460 L------SKLKKANTKTDVYSLGVTILEL 482
+ + + D+++ G+ + E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 150
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 466 ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW 509
A +D+++LG I +L+ G P N + A I+K E+
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI---FAKIIKLEY 251
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLAL 348
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 349 RAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE 407
Y+ EKL Y +G L ++ G D + L +LH +
Sbjct: 96 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-GK 149
Query: 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKKA 466
IIH +L N+LL++ + +I+DFG ++++ Y +PEL K A
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
+D+++LG I +L+ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQ--REFESEVSLLGKIRHPNLLALR 349
E +GK + V + + G + A K + K + ++ E E + K++HPN++ L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ + LVFD + G L + AR + D I+ + + + HSN I
Sbjct: 95 DS-IQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHSN-GI 149
Query: 410 IHGNLTSSNVLLDDSTNA---KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H NL N+LL K++DFGL+ + GY +PE+ K
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 207
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
+ D+++ GV + LL G P
Sbjct: 208 SKPVDIWACGVILYILLVGYPP 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 98 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 151
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 211
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 16/222 (7%)
Query: 277 DGPLMFTADDLLCATAEIMGKSTYGTVYKA-TLEDGSQVAVKRLR-EKITKG----QREF 330
D ++F LC E++GK + V + E G Q AVK + K T +
Sbjct: 17 DDDVLFEDVYELC---EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 73
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPI-DWPTR 389
+ E S+ ++HP+++ L Y G +VF++M L + R +
Sbjct: 74 KREASICHMLKHPHIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXX 446
++ + L + H N NIIH ++ NVLL ++S K+ DFG++ +
Sbjct: 133 SHYMRQILEALRYCHDN-NIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVA 190
Query: 447 XXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ APE+ K + DV+ GV + LL+G P
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQR-EFESEVSLLGKIRHPNLLALR-AY 351
+G G V+K + + G +A K + +I R + E+ +L + P ++ A+
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
Y GE + ++M GSL L G PE I + +IKG+T +L I
Sbjct: 93 Y--SDGEISICMEHMDGGSLDQVLKKAGRIPEQ-ILGKVSIAVIKGLT----YLREKHKI 145
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
+H ++ SN+L++ K+ DFG+S + Y +PE + + +
Sbjct: 146 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQ 202
Query: 470 TDVYSLGVTILELLTGKSP 488
+D++S+G++++E+ G+ P
Sbjct: 203 SDIWSMGLSLVEMAVGRYP 221
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 100 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 153
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 98 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 151
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 211
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 74 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 127
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 128 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 187
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 150
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 150
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 148
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 148
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 150
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 37/294 (12%)
Query: 295 MGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF-ESEVSLLGKIRHPNLLALRAYYL 353
+GK YG V+ G +VAVK T+ F E+E+ +RH N+L A +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFF--TTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 354 ---GPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS----- 405
G + L+ DY +GSL +L + T +D + +K+ GL HLH+
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 406 --NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL 460
I H +L S N+L+ + I+D GL+ +G Y PE+
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 461 --SKLKKANTKT----DVYSLGVTILELLTGKSPGEPLNGAELP--QWVASIVKEEWTNE 512
L + + ++ D+YS G+ + E+ G + +LP V S E E
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMRE 277
Query: 513 VFDLELMRDAPTI-----GDELLNTL-KLALHCVDPSPSARPEVLQVVQQLEEI 560
+ ++ +R P+ DE L + KL C +P++R L+V + L ++
Sbjct: 278 IVCIKKLR--PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 295 MGKSTYGTVYKATL-EDGSQVAVKRLREKITKGQREFESEV-----SLLGKIRHPNLLAL 348
MG T G V+K + G +AVK++R G +E + +L P ++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRS---GNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRM--KIIKGMTRGLLHLHSN 406
++ + + + M G+ A L R + PI P R+ K+ + + L +L
Sbjct: 90 FGTFI-TNTDVFIAMELM--GTCAEKLKKR-MQGPI--PERILGKMTVAIVKALYYLKEK 143
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLS-RLMXXXXXXXXXXXXXXLGYRAPEL----- 460
+IH ++ SN+LLD+ K+ DFG+S RL+ Y APE
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCA---AYMAPERIDPPD 200
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + DV+SLG++++EL TG+ P
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 79 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 132
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 133 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 73 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 126
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 186
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 75 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 128
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 129 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 188
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF--ESEVSLLGKIRHPNLLALRA 350
E +GK +G V++ G +VAVK ++ +R + E+E+ +RH N+L A
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA 65
Query: 351 YYLGPKG---EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--- 404
G + LV DY HGSL +L+ + +K+ GL HLH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 405 ----SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRA 457
I H +L S N+L+ + I+D GL+ +G Y A
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 458 PEL------SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP 498
PE+ K ++ + D+Y++G+ E+ S G +LP
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 228
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 72 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 125
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 126 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 185
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 94 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 147
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 18/183 (9%)
Query: 311 GSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPK-----GEKLLV 362
G VAVK+L T +R + E+ LL + H N+++L + K + LV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD 422
+ M +L +H +D ++ M G+ HLHS IIH +L SN+++
Sbjct: 108 MELM-DANLCQVIHME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVK 160
Query: 423 DSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILEL 482
KI DFGL+R YRAPE+ D++S+G + EL
Sbjct: 161 SDCTLKILDFGLARTACTNFMMTPYVVTRY--YRAPEVILGMGYAANVDIWSVGCIMGEL 218
Query: 483 LTG 485
+ G
Sbjct: 219 VKG 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF--ESEVSLLGKIRHPNLLALRA 350
E +GK +G V++ G +VAVK ++ +R + E+E+ +RH N+L A
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA 103
Query: 351 YYLGPKG---EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--- 404
G + LV DY HGSL +L+ + +K+ GL HLH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 405 ----SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRA 457
I H +L S N+L+ + I+D GL+ +G Y A
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 458 PEL------SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP 498
PE+ K ++ + D+Y++G+ E+ S G +LP
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGTVYKA-TLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ TV A L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 94 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 147
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF--ESEVSLLGKIRHPNLLALRA 350
E +GK +G V++ G +VAVK ++ +R + E+E+ +RH N+L A
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA 64
Query: 351 YYLGPKG---EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--- 404
G + LV DY HGSL +L+ + +K+ GL HLH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 405 ----SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRA 457
I H +L S N+L+ + I+D GL+ +G Y A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 458 PEL------SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP 498
PE+ K ++ + D+Y++G+ E+ S G +LP
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF--ESEVSLLGKIRHPNLLALRA 350
E +GK +G V++ G +VAVK ++ +R + E+E+ +RH N+L A
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA 67
Query: 351 YYLGPKG---EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--- 404
G + LV DY HGSL +L+ + +K+ GL HLH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 405 ----SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRA 457
I H +L S N+L+ + I+D GL+ +G Y A
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 458 PEL------SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP 498
PE+ K ++ + D+Y++G+ E+ S G +LP
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 230
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF--ESEVSLLGKIRHPNLLALRA 350
E +GK +G V++ G +VAVK ++ +R + E+E+ +RH N+L A
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA 70
Query: 351 YYLGPKG---EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--- 404
G + LV DY HGSL +L+ + +K+ GL HLH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 405 ----SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRA 457
I H +L S N+L+ + I+D GL+ +G Y A
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 458 PEL------SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP 498
PE+ K ++ + D+Y++G+ E+ S G +LP
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 233
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 18/183 (9%)
Query: 311 GSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPK-----GEKLLV 362
G VAVK+L T +R + E+ LL + H N+++L + K + LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD 422
+ M +L +H +D ++ M G+ HLHS IIH +L SN+++
Sbjct: 106 MELM-DANLCQVIHME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVK 158
Query: 423 DSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILEL 482
KI DFGL+R YRAPE+ D++S+G + EL
Sbjct: 159 SDCTLKILDFGLARTASTNFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEL 216
Query: 483 LTG 485
+ G
Sbjct: 217 VKG 219
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 396 MTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLG 454
+ RG+ L S+ IH +L + N+LL ++ KI DFGL+R + L
Sbjct: 208 VARGMEFL-SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK 266
Query: 455 YRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVF 514
+ APE K +TK+DV+S GV + E+ + G P G ++ + S ++E
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFS--LGGSPYPGVQMDEDFCSRLREGMR---- 320
Query: 515 DLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
MR AP ++ L C P RP ++V++L
Sbjct: 321 ----MR-APEYSTP--EIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAV-KRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
E +G +G V++ + +V V K + + ++E+S++ ++ HP L+ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
+ K E +L+ +++ G L F + + + ++ GL H+H + +I+H
Sbjct: 117 FED-KYEMVLILEFLSGGEL--FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVH 172
Query: 412 GNLTSSNVLLD--DSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
++ N++ + +++ KI DFGL+ + APE+ +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA--APEIVDREPVGFY 230
Query: 470 TDVYSLGVTILELLTGKSP 488
TD++++GV LL+G SP
Sbjct: 231 TDMWAIGVLGYVLLSGLSP 249
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF--ESEVSLLGKIRHPNLLALRA 350
E +GK +G V++ G +VAVK ++ +R + E+E+ +RH N+L A
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA 90
Query: 351 YYLGPKG---EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--- 404
G + LV DY HGSL +L+ + +K+ GL HLH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 405 ----SNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---YRA 457
I H +L S N+L+ + I+D GL+ +G Y A
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 458 PEL------SKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP 498
PE+ K ++ + D+Y++G+ E+ S G +LP
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 253
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 295 MGKSTYGTVYKATL-----EDGS-QVAVKRLREKITKGQRE-FESEVSLLGKI-RHPNLL 346
+G +G V +AT ED +VAVK L+ ++E SE+ ++ + +H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 347 ALRAYYLGP---KGEKLLVFDYMPHGSLATFLHAR-----GPE-TPIDWPTRMKIIKGM- 396
L LG G L++ +Y +G L FL + GP P P + G
Sbjct: 99 NL----LGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 397 --TRGLLHLHS----------NENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXX 443
R LLH S ++N IH ++ + NVLL + AKI DFGL+R +M
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 444 XXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT 484
+ + APE ++DV+S G+ + E+ +
Sbjct: 215 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 294 IMGKSTYGTVY----KATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALR 349
+ G+ T+GTV K+T G VA+K++ + RE + + L + HPN++ L+
Sbjct: 30 MAGQGTFGTVQLGKEKST---GMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQ 85
Query: 350 AYY--LGPKGEKLL----VFDYMP---HGSLATFLHARGPETPIDWPTRM-KIIKGMTRG 399
+Y+ LG + + + V +Y+P H + + PI + ++I+ + G
Sbjct: 86 SYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI--G 143
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNA-KISDFGLSRLMXXXXXXXXXXXXXXLGYRAP 458
LHL S N+ H ++ NVL++++ K+ DFG ++ + YRAP
Sbjct: 144 CLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY--YRAP 200
Query: 459 EL-SKLKKANTKTDVYSLGVTILELLTGK 486
EL + T D++S+G E++ G+
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 292 AEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPN 344
E +G + V K + G + A K ++++ ++ R E E EVS+L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
++ L Y + + +L+ + + G L FL + + IK + G+ +LH
Sbjct: 77 VITLHDVYEN-RTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 405 SNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL 460
+ + I H +L N++L D + K+ DFGL+ + + APE+
Sbjct: 133 TKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEI 189
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 292 AEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPN 344
E +G + V K + G + A K ++++ ++ R E E EVS+L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
++ L Y + + +L+ + + G L FL + + IK + G+ +LH
Sbjct: 77 VITLHDVYEN-RTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 405 SNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL 460
+ + I H +L N++L D + K+ DFGL+ + + APE+
Sbjct: 133 TKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEI 189
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPNL 345
E +G + V K + G + A K ++++ ++ R E E EVS+L ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L Y + + +L+ + + G L FL + + IK + G+ +LH+
Sbjct: 78 ITLHDVYEN-RTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 406 NENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS 461
+ I H +L N++L D + K+ DFGL+ + + APE+
Sbjct: 134 KK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIV 190
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 295 MGKSTYGTVYKATLEDGSQV-AVKRLREKITKGQREFES---EVSLLGKIRHPNLLALRA 350
+GK ++G V D ++ A+K + ++ + E + E+ ++ + HP L+ L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL-W 81
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y + + +V D + G L L T I + L +L N+ II
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYL-QNQRII 137
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA---N 467
H ++ N+LLD+ + I+DF ++ ++ Y APE+ +K +
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTK--PYMAPEMFSSRKGAGYS 195
Query: 468 TKTDVYSLGVTILELLTGKSP 488
D +SLGVT ELL G+ P
Sbjct: 196 FAVDWWSLGVTAYELLRGRRP 216
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPNL 345
E +G + V K + G + A K ++++ ++ R E E EVS+L ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
+ L Y + + +L+ + + G L FL + + IK + G+ +LH+
Sbjct: 78 ITLHDVYEN-RTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 406 NENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS 461
+ I H +L N++L D + K+ DFGL+ + + APE+
Sbjct: 134 KK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIV 190
Query: 462 KLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 292 AEIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQR------EFESEVSLLGKIRHPN 344
E +G + V K + G + A K ++++ ++ R E E EVS+L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
++ L Y + + +L+ + + G L FL + + IK + G+ +LH
Sbjct: 77 VITLHDVYEN-RTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 405 SNENIIHGNLTSSNVLLDDST----NAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPEL 460
+ + I H +L N++L D + K+ DFGL+ + + APE+
Sbjct: 133 TKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEI 189
Query: 461 SKLKKANTKTDVYSLGVTILELLTGKSP 488
+ + D++S+GV LL+G SP
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQREFES-EVSLLGKIRHPNLLALR 349
+GK + ++ + D +V ++ K + QRE S E+S+ + H +++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
++ + VF + + L + P ++ + G +LH N +
Sbjct: 84 GFF----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-RV 138
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
IH +L N+ L++ KI DFGL+ + Y APE+ K + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP-NYIAPEVLSKKGHSFE 197
Query: 470 TDVYSLGVTILELLTGKSPGE 490
DV+S+G + LL GK P E
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFE 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQREFES-EVSLLGKIRHPNLLALR 349
+GK + ++ + D +V ++ K + QRE S E+S+ + H +++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
++ + VF + + L + P ++ + G +LH N +
Sbjct: 84 GFF----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-RV 138
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
IH +L N+ L++ KI DFGL+ + Y APE+ K + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP-NYIAPEVLSKKGHSFE 197
Query: 470 TDVYSLGVTILELLTGKSPGE 490
DV+S+G + LL GK P E
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFE 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQREFES-EVSLLGKIRHPNLLALR 349
+GK + ++ + D +V ++ K + QRE S E+S+ + H +++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
++ + VF + + L + P ++ + G +LH N +
Sbjct: 106 GFF----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-RV 160
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
IH +L N+ L++ KI DFGL+ + Y APE+ K + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP-NYIAPEVLSKKGHSFE 219
Query: 470 TDVYSLGVTILELLTGKSPGE 490
DV+S+G + LL GK P E
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFE 240
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQREFES-EVSLLGKIRHPNLLALR 349
+GK + ++ + D +V ++ K + QRE S E+S+ + H +++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
++ + VF + + L + P ++ + G +LH N +
Sbjct: 88 GFF----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-RV 142
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
IH +L N+ L++ KI DFGL+ + Y APE+ K + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP-NYIAPEVLSKKGHSFE 201
Query: 470 TDVYSLGVTILELLTGKSPGE 490
DV+S+G + LL GK P E
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFE 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQREFES-EVSLLGKIRHPNLLALR 349
+GK + ++ + D +V ++ K + QRE S E+S+ + H +++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
++ + VF + + L + P ++ + G +LH N +
Sbjct: 108 GFF----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-RV 162
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
IH +L N+ L++ KI DFGL+ + Y APE+ K + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP-NYIAPEVLSKKGHSFE 221
Query: 470 TDVYSLGVTILELLTGKSPGE 490
DV+S+G + LL GK P E
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFE 242
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 311 GSQVAVKRLREKITKGQR--EFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368
G VA+K + +K T G ++E+ L +RH ++ L + L + +V +Y P
Sbjct: 35 GEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQL-YHVLETANKIFMVLEYCPG 92
Query: 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAK 428
G L ++ ++ + + TR+ + + + + ++HS + H +L N+L D+ K
Sbjct: 93 GELFDYIISQDRLSEEE--TRV-VFRQIVSAVAYVHS-QGYAHRDLKPENLLFDEYHKLK 148
Query: 429 ISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKS 487
+ DFGL L Y APEL + K ++ DV+S+G+ + L+ G
Sbjct: 149 LIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFL 208
Query: 488 PGEPLN-----------GAELPQWVA 502
P + N ++P+W++
Sbjct: 209 PFDDDNVMALYKKIMRGKYDVPKWLS 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 292 AEIMGKSTYGT-VYKATLEDGSQVAVKRLREK-ITKGQR--EFESEVSLLGKIRHPNLLA 347
+I+G+ ++ T V L + A+K L ++ I K + E ++ ++ HP +
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 348 LRAYYLGPKGEKLLV-FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y+ EKL Y +G L ++ G D + L +LH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-G 148
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKK 465
+ IIH +L N+LL++ + +I+DFG ++++ Y +PEL K
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
A +D+++LG I +L+ G P
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREK---ITKGQREFES-EVSLLGKIRHPNLLALR 349
+GK + ++ + D +V ++ K + QRE S E+S+ + H +++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
++ + VF + + L + P ++ + G +LH N +
Sbjct: 82 GFF----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-RV 136
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
IH +L N+ L++ KI DFGL+ + Y APE+ K + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP-NYIAPEVLSKKGHSFE 195
Query: 470 TDVYSLGVTILELLTGKSPGE 490
DV+S+G + LL GK P E
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFE 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALR 349
E +GK + V + + G + A K + K + ++ E E + ++HPN++ L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ +G LVFD + G L + AR + D I+ + + H H N I
Sbjct: 70 DS-ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILESVNHCHLN-GI 124
Query: 410 IHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H +L N+LL + K++DFGL+ + GY +PE+ +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D+++ GV + LL G P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 39/212 (18%)
Query: 301 GTVYKATLEDGSQVAVKRLREK----------ITKGQREFESEVSLLGKI-RHPNLLALR 349
G V K T+ GS KR K I K +R+ E+ +L + +HPN++ L+
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLK 87
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMK---------IIKGMTRGL 400
V+D H L T L RG E +D R K ++ + + +
Sbjct: 88 D-----------VYDDGKHVYLVTEL-MRGGEL-LDKILRQKFFSEREASFVLHTIGKTV 134
Query: 401 LHLHSNENIIHGNLTSSNVL-LDDSTNA---KISDFGLSRLMXXXXXXXXXXXXXXLGYR 456
+LHS + ++H +L SN+L +D+S N +I DFG ++ + +
Sbjct: 135 EYLHS-QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA-NFV 192
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSP 488
APE+ K + + D++SLG+ + +L G +P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALR 349
E +GK + V + + G + A K + K + ++ E E + ++HPN++ L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ +G LVFD + G L + AR + D I+ + + H H N I
Sbjct: 70 DS-ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILESVNHCHLN-GI 124
Query: 410 IHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H +L N+LL + K++DFGL+ + GY +PE+ +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D+++ GV + LL G P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 39/212 (18%)
Query: 301 GTVYKATLEDGSQVAVKRLREK----------ITKGQREFESEVSLLGKI-RHPNLLALR 349
G V K T+ GS KR K I K +R+ E+ +L + +HPN++ L+
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLK 87
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMK---------IIKGMTRGL 400
V+D H L T L RG E +D R K ++ + + +
Sbjct: 88 D-----------VYDDGKHVYLVTEL-MRGGEL-LDKILRQKFFSEREASFVLHTIGKTV 134
Query: 401 LHLHSNENIIHGNLTSSNVL-LDDSTNA---KISDFGLSRLMXXXXXXXXXXXXXXLGYR 456
+LHS + ++H +L SN+L +D+S N +I DFG ++ + +
Sbjct: 135 EYLHS-QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA-NFV 192
Query: 457 APELSKLKKANTKTDVYSLGVTILELLTGKSP 488
APE+ K + + D++SLG+ + +L G +P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 295 MGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFE---------------------- 331
+GK +YG V A E D + A+K L +K Q F
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 332 ----SEVSLLGKIRHPNLLALRAYYLGPKGEKL-LVFDYMPHGSLATFLHARGPETPIDW 386
E+++L K+ HPN++ L P + L +VF+ + G + + P+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLSE 136
Query: 387 PTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXX 446
+ + +G+ +LH + IIH ++ SN+L+ + + KI+DFG+S
Sbjct: 137 DQARFYFQDLIKGIEYLHY-QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS 195
Query: 447 XXXXXXLGYRAPE-LSKLKK--ANTKTDVYSLGVTILELLTGKSP 488
+ APE LS+ +K + DV+++GVT+ + G+ P
Sbjct: 196 NTVGTP-AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALR 349
E +GK + V + + G + A K + K + ++ E E + ++HPN++ L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ +G L+FD + G L + AR + D I+ + +LH H +
Sbjct: 88 DS-ISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILEAVLHCHQM-GV 142
Query: 410 IHGNLTSSNVLLDDS---TNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H +L N+LL K++DFGL+ + GY +PE+ +
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D+++ GV + LL G P
Sbjct: 202 GKPVDLWACGVILYILLVGYPP 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALR 349
E +GK + V + L G + A K + K + ++ E E + ++H N++ L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ +G LVFD + G L + AR + D I+ + +LH H +
Sbjct: 70 DS-ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILEAVLHCHQM-GV 124
Query: 410 IHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H +L N+LL K++DFGL+ + GY +PE+ + +
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D+++ GV + LL G P
Sbjct: 184 GKPVDIWACGVILYILLVGYPP 205
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXX 448
++ KGM ++ IH +L + N+LL + KI DFGL+R +
Sbjct: 200 FQVAKGM-----EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 254
Query: 449 XXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKE 507
L + APE + ++DV+S GV + E+ + G SP + + E
Sbjct: 255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDE 303
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
E+ + + MR E+ T+ L C PS RP ++V+ L
Sbjct: 304 EFCRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 34 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPE 381
L P G +++ ++ G+L+T+L ++ E
Sbjct: 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 124
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXX 448
++ KGM ++ IH +L + N+LL + KI DFGL+R +
Sbjct: 207 FQVAKGM-----EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 261
Query: 449 XXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKE 507
L + APE + ++DV+S GV + E+ + G SP + + E
Sbjct: 262 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDE 310
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
E+ + + MR E+ T+ L C PS RP ++V+ L
Sbjct: 311 EFCRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 41 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHAR 378
L P G +++ ++ G+L+T+L ++
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXX 448
++ KGM ++ IH +L + N+LL + KI DFGL+R +
Sbjct: 198 FQVAKGM-----EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 252
Query: 449 XXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKE 507
L + APE + ++DV+S GV + E+ + G SP + + E
Sbjct: 253 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDE 301
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
E+ + + MR E+ T+ L C PS RP ++V+ L
Sbjct: 302 EFCRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 32 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 88
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPE 381
L P G +++ ++ G+L+T+L ++ E
Sbjct: 89 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 122
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXX 448
++ KGM ++ IH +L + N+LL + KI DFGL+R +
Sbjct: 205 FQVAKGM-----EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 259
Query: 449 XXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKE 507
L + APE + ++DV+S GV + E+ + G SP + + E
Sbjct: 260 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKIDE 308
Query: 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
E+ + + MR E+ T+ L C PS RP ++V+ L
Sbjct: 309 EFCRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQ-REFESEVSLLGKI-RHPNLLA 347
A +++ +G AT VAVK L+E T + R SE+ +L I H N++
Sbjct: 39 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 348 LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPE 381
L P G +++ ++ G+L+T+L ++ E
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 20/196 (10%)
Query: 295 MGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFESEVSLLG---KI-RHPNLLALR 349
+G +YG V+K + EDG AVKR +G ++ +++ +G K+ +HP + L
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPF-RGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARG---PETPIDWPTRMKIIKGMTRGLLHLHSN 406
+ +G L + + SL A G PE + W ++ L HLHS
Sbjct: 124 QAW--EEGGILYLQTELCGPSLQQHCEAWGASLPEAQV-W----GYLRDTLLALAHLHS- 175
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+ ++H ++ +N+ L K+ DFGL L+ Y APEL +
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQ-GSY 232
Query: 467 NTKTDVYSLGVTILEL 482
T DV+SLG+TILE+
Sbjct: 233 GTAADVFSLGLTILEV 248
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRL---REKITKGQREFESEVSLLGKIRHPNLLALR 349
E +GK + V + + +Q ++ ++ + ++ E E + ++HPN++ L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ +G LVFD + G L + AR + D I + + H+H + +I
Sbjct: 97 DS-ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIHQILESVNHIHQH-DI 151
Query: 410 IHGNLTSSNVLLDDSTN---AKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H +L N+LL K++DFGL+ + GY +PE+ +
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D+++ GV + LL G P
Sbjct: 211 GKPVDIWACGVILYILLVGYPP 232
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 22 SELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPAS-FSNLSSLVSLTLESN 80
++ +++ L NK+S + RL++LR+L + N + +LPA F L +L +L + N
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDN 95
Query: 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPAXXXX 140
L + D+L NL+ L L RNQ+ P +++ LT L L N+L +P
Sbjct: 96 KLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFD 154
Query: 141 XXXXXXXXXXYNNLSGPVP 159
YNN VP
Sbjct: 155 KLTSLKELRLYNNQLKRVP 173
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 20 KLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
+L L E+ L N++ + P L++L L YN + F L+SL L L +
Sbjct: 107 QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYN 166
Query: 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQN 128
N L + DKL L L L NQ+ ++ L +L L +N
Sbjct: 167 NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 14 IPASLGK-LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSL 72
+PA + K L L+ + ++ NK+ + +L L L N + P F +L+ L
Sbjct: 76 LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKL 135
Query: 73 VSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130
L+L N L DKL +L L L NQ+ ++ L L L N+L
Sbjct: 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 288 LCATAEIMGKSTYGTVYKATLED-GSQVAVKRLR-----EKITKGQREFESEVSLLGKIR 341
L ++I+G+ V++ + G A+K + REFE +L K+
Sbjct: 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLN 65
Query: 342 HPNLLALRAYYLGPKG-EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ L A K+L+ ++ P GSL T L + + +++ + G+
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 401 LHLHSNENIIHGNLTSSNVLL----DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR 456
HL N I+H N+ N++ D + K++DFG +R + Y
Sbjct: 126 NHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEE--YL 182
Query: 457 APELSK--------LKKANTKTDVYSLGVTILELLTGKSPGEPLNG 494
P++ + KK D++S+GVT TG P P G
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 12/202 (5%)
Query: 293 EIMGKSTYGTVYKAT-LEDGSQVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALR 349
E +GK + V + + G + A + K + ++ E E + ++HPN++ L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
+ +G L+FD + G L + AR + D I+ + +LH H +
Sbjct: 77 DS-ISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILEAVLHCHQM-GV 131
Query: 410 IHGNLTSSNVLLDDS---TNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+H NL N+LL K++DFGL+ + GY +PE+ +
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
D+++ GV + LL G P
Sbjct: 191 GKPVDLWACGVILYILLVGYPP 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 14/203 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKI-TKGQREFESEVSLLGKIRHPNLLALRAYY 352
+G+ YG V K + G AVKR+R + ++ Q+ ++ + +
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHA---RGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
L +G+ + + + SL F +G P D KI + + L HLHS ++
Sbjct: 102 LFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPED--ILGKIAVSIVKALEHLHSKLSV 158
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELS----KLKK 465
IH ++ SNVL++ K DFG+S + Y APE K
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP--YXAPERINPELNQKG 216
Query: 466 ANTKTDVYSLGVTILELLTGKSP 488
+ K+D++SLG+T +EL + P
Sbjct: 217 YSVKSDIWSLGITXIELAILRFP 239
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 14/232 (6%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
AE +G+ +G V++ + + + + Q + E+S+L RH N+L L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 352 YLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIH 411
+ + E +++F+++ L F ++ + + + L LHS+ NI H
Sbjct: 70 FESME-ELVMIFEFI--SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH-NIGH 125
Query: 412 GNLTSSNVLLDD--STNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
++ N++ S+ KI +FG +R + Y APE+ + +T
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE--YYAPEVHQHDVVSTA 183
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521
TD++SLG + LL+G + P Q + +I+ E+T FD E ++
Sbjct: 184 TDMWSLGTLVYVLLSGIN---PFLAETNQQIIENIMNAEYT---FDEEAFKE 229
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 26/226 (11%)
Query: 288 LCATAEIMGKSTYGTVYKATLED-GSQVAVKRLR-----EKITKGQREFESEVSLLGKIR 341
L ++I+G+ V++ + G A+K + REFE +L K+
Sbjct: 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLN 65
Query: 342 HPNLLALRAYYLGPKG-EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400
H N++ L A K+L+ ++ P GSL T L + + +++ + G+
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 401 LHLHSNENIIHGNLTSSNVLL----DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYR 456
HL N I+H N+ N++ D + K++DFG +R + Y
Sbjct: 126 NHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE--YL 182
Query: 457 APELSK--------LKKANTKTDVYSLGVTILELLTGKSPGEPLNG 494
P++ + KK D++S+GVT TG P P G
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 295 MGKSTYGTVYKATLED---GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ ++G V++ +ED G Q AVK++R ++ + + E+ + P ++ L Y
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPL--Y 151
Query: 352 YLGPKGEKLLVF-DYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+G + +F + + GSL + +G PE + + GL +LHS
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED-----RALYYLGQALEGLEYLHSR-R 205
Query: 409 IIHGNLTSSNVLLD-DSTNAKISDFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSKL 463
I+HG++ + NVLL D ++A + DFG + + + + APE+
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 464 KKANTKTDVYSLGVTILELLTGKSP 488
+ + K DV+S +L +L G P
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 295 MGKSTYGTVYKATLED---GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAY 351
+G+ ++G V++ +ED G Q AVK++R ++ + + E+ + P ++ L Y
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPL--Y 132
Query: 352 YLGPKGEKLLVF-DYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+G + +F + + GSL + +G PE + + GL +LHS
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED-----RALYYLGQALEGLEYLHSR-R 186
Query: 409 IIHGNLTSSNVLLD-DSTNAKISDFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSKL 463
I+HG++ + NVLL D ++A + DFG + + + + APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 464 KKANTKTDVYSLGVTILELLTGKSP 488
+ + K DV+S +L +L G P
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 9/210 (4%)
Query: 294 IMGKSTYGTVYKATLEDGSQV-AVKRLREKITKGQREFES---EVSLLGKIRHPNLLALR 349
++GK ++G V A + ++ A+K L++ + + E E +L + P L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409
V +Y+ G L + G P + ++ GL LH I
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISIGLFFLHKR-GI 141
Query: 410 IHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTK 469
I+ +L NV+LD + KI+DFG+ + Y APE+ +
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTP-DYIAPEIIAYQPYGKS 200
Query: 470 TDVYSLGVTILELLTGKSPGEPLNGAELPQ 499
D ++ GV + E+L G+ P + + EL Q
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 29/212 (13%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLR----EKITKGQREFESEVSLLGKIRHPNLLALR 349
+G+ TYG VYKA VA+KR+R E+ G EVSLL +++H N++ L+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQHRNIIELK 99
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG----MTRGLLHLHS 405
+ + L+F+Y L ++ + P+ M++IK + G+ HS
Sbjct: 100 S-VIHHNHRLHLIFEYA-ENDLKKYM-DKNPD------VSMRVIKSFLYQLINGVNFCHS 150
Query: 406 NENIIHGNLTSSNVLLDDSTNA-----KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPE- 459
+H +L N+LL S + KI DFGL+R L YR PE
Sbjct: 151 R-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEIITLWYRPPEI 208
Query: 460 LSKLKKANTKTDVYSLGVTILELLTGKSPGEP 491
L + +T D++S+ E+L K+P P
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEMLM-KTPLFP 239
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L+ + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQMLVGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+GV + E++ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 44/283 (15%)
Query: 293 EIMGKSTYGTVYKATLED--------GSQVAVKRLREKITKGQREFESEVSLLGKIRHPN 344
E +G+ T+ ++K + ++V +K L + F S++ K+ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 345 L-LALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
L L + G E +LV +++ GSL T+L I W ++++ K + + L
Sbjct: 74 LVLNYGVCFCG--DENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 404 HSNENIIHGNLTSSNVLL----DDSTN----AKISDFGLSRLMXXXXXXXXXXXXXXLGY 455
N +IHGN+ + N+LL D T K+SD G+S + +
Sbjct: 130 EEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-----ITVLPKDILQERIPW 183
Query: 456 RAPE-LSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVF 514
PE + K N TD +S G T+ E+ +G +PL+ + S K ++ +
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGD--KPLSALD------SQRKLQFYEDRH 235
Query: 515 DLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
L + A EL N + +C+D P RP +++ L
Sbjct: 236 QLPAPKAA-----ELANLIN---NCMDYEPDHRPSFRAIIRDL 270
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L+ + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQMLVGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+GV + E++ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 14/206 (6%)
Query: 291 TAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQRE----FESEVSLLGKIRHPNLL 346
+++G+ +G V + +V +L K +R F E ++ P ++
Sbjct: 79 VVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 138
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L + K +V +YMP G L + + P W + L +HS
Sbjct: 139 QLFCAFQDDK-YLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFY--TAEVVLALDAIHSM 193
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
+IH ++ N+LLD + K++DFG M Y +PE+ K +
Sbjct: 194 -GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGG 252
Query: 467 N----TKTDVYSLGVTILELLTGKSP 488
+ + D +S+GV + E+L G +P
Sbjct: 253 DGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 90
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 144
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 145 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY--YRAPEVILG 201
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKG 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 14/206 (6%)
Query: 291 TAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQRE----FESEVSLLGKIRHPNLL 346
+++G+ +G V + +V +L K +R F E ++ P ++
Sbjct: 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y +V +YMP G L + + P W R + + L +HS
Sbjct: 133 QL-FYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKW-ARFYTAE-VVLALDAIHS- 186
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
IH ++ N+LLD S + K++DFG M Y +PE+ K +
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 246
Query: 467 N----TKTDVYSLGVTILELLTGKSP 488
+ + D +S+GV + E+L G +P
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +YMP G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D K++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +YMP G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D K++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 14/206 (6%)
Query: 291 TAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQRE----FESEVSLLGKIRHPNLL 346
+++G+ +G V + +V +L K +R F E ++ P ++
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y +V +YMP G L + + P W R + + L +HS
Sbjct: 138 QL-FYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKW-ARFYTAE-VVLALDAIHS- 191
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
IH ++ N+LLD S + K++DFG M Y +PE+ K +
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 467 N----TKTDVYSLGVTILELLTGKSP 488
+ + D +S+GV + E+L G +P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 143
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 144 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 200
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 14/206 (6%)
Query: 291 TAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQRE----FESEVSLLGKIRHPNLL 346
+++G+ +G V + +V +L K +R F E ++ P ++
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN 406
L Y +V +YMP G L + + P W R + + L +HS
Sbjct: 138 QL-FYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKW-ARFYTAE-VVLALDAIHS- 191
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKA 466
IH ++ N+LLD S + K++DFG M Y +PE+ K +
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 467 N----TKTDVYSLGVTILELLTGKSP 488
+ + D +S+GV + E+L G +P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 42/282 (14%)
Query: 293 EIMGKSTYGTVYKATLED--------GSQVAVKRLREKITKGQREFESEVSLLGKIRHPN 344
E +G+ T+ ++K + ++V +K L + F S++ K+ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 345 LLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
L+ L E +LV +++ GSL T+L I W ++++ K + + L
Sbjct: 74 LV-LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLE 130
Query: 405 SNENIIHGNLTSSNVLL----DDSTN----AKISDFGLSRLMXXXXXXXXXXXXXXLGYR 456
N +IHGN+ + N+LL D T K+SD G+S + +
Sbjct: 131 EN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-----ITVLPKDILQERIPWV 184
Query: 457 APE-LSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFD 515
PE + K N TD +S G T+ E+ +G +PL+ + S K ++ +
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGD--KPLSALD------SQRKLQFYEDRHQ 236
Query: 516 LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557
L + A EL N + +C+D P RP +++ L
Sbjct: 237 LPAPKAA-----ELANLIN---NCMDYEPDHRPSFRAIIRDL 270
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 295 MGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G G V+ A D +VA+K++ + + E+ ++ ++ H N++ + L
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI-L 77
Query: 354 GPKGEKL--------------LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRG 399
GP G +L +V +YM LA L +GP ++ R+ + + + RG
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGP--LLEEHARLFMYQ-LLRG 132
Query: 400 LLHLHSNENIIHGNLTSSNVLLD-DSTNAKISDFGLSRLMXXXXXXXXXXXXXXL--GYR 456
L ++HS N++H +L +N+ ++ + KI DFGL+R+M + YR
Sbjct: 133 LKYIHS-ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYR 191
Query: 457 APELSKLKKANTKT-DVYSLGVTILELLTGKS 487
+P L TK D+++ G E+LTGK+
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L+ + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 23/177 (12%)
Query: 323 ITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYMPHGSL------ATFL 375
I K +R+ E+ +L + +HPN++ L+ Y K +V + M G L F
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGK-YVYVVTELMKGGELLDKILRQKFF 113
Query: 376 HARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVL-LDDSTN---AKISD 431
R ++ +T+ + +LH+ + ++H +L SN+L +D+S N +I D
Sbjct: 114 SEREASA---------VLFTITKTVEYLHA-QGVVHRDLKPSNILYVDESGNPESIRICD 163
Query: 432 FGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
FG ++ + + APE+ + + + D++SLGV + +LTG +P
Sbjct: 164 FGFAKQLRAENGLLMTPCYTA-NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L+ + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L+ + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L+ + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQMLVGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTG 485
D++S+G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ +E E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D K++DFGL++ + Y APE+ K N
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L+ N L+G P + S +QE+ L NKI + L +L+ L+ N I+ +
Sbjct: 59 LELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVM 118
Query: 63 PASFSNLSSLVSLTLESN 80
P SF +L+SL SL L SN
Sbjct: 119 PGSFEHLNSLTSLNLASN 136
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 26 EISLSHNKISGVMPSD--LGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLD 83
E+ L+ N++ G + SD GRL L L+ N + G P +F S + L L N +
Sbjct: 33 ELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91
Query: 84 DQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQN 128
+ LH L LNL NQIS +P + ++++LT L+L+ N
Sbjct: 92 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 180
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 181 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 237
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRM 390
E+E+ +L K+ HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 118
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXX 447
+ M + +LH N IIH +L NVLL ++ KI+DFG S+++
Sbjct: 119 YFYQ-MLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 448 XXXXXLGYRAPE-LSKLKKA--NTKTDVYSLGVTILELLTGKSP 488
Y APE L + A N D +SLGV + L+G P
Sbjct: 177 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRM 390
E+E+ +L K+ HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 118
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXX 447
+ M + +LH N IIH +L NVLL ++ KI+DFG S+++
Sbjct: 119 YFYQ-MLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 448 XXXXXLGYRAPE-LSKLKKA--NTKTDVYSLGVTILELLTGKSP 488
Y APE L + A N D +SLGV + L+G P
Sbjct: 177 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRM 390
E+E+ +L K+ HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 117
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXX 447
+ M + +LH N IIH +L NVLL ++ KI+DFG S+++
Sbjct: 118 YFYQ-MLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 175
Query: 448 XXXXXLGYRAPE-LSKLKKA--NTKTDVYSLGVTILELLTGKSP 488
Y APE L + A N D +SLGV + L+G P
Sbjct: 176 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRM 390
E+E+ +L K+ HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 124
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXX 447
+ M + +LH N IIH +L NVLL ++ KI+DFG S+++
Sbjct: 125 YFYQ-MLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 182
Query: 448 XXXXXLGYRAPE-LSKLKKA--NTKTDVYSLGVTILELLTGKSP 488
Y APE L + A N D +SLGV + L+G P
Sbjct: 183 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAP 458
GL L S + II+ +L NV+LD + KI+DFG+ + Y AP
Sbjct: 133 GLFFLQS-KGIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAP 190
Query: 459 ELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQ 499
E+ + D ++ GV + E+L G++P E + EL Q
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRM 390
E+E+ +L K+ HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 118
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXX 447
+ M + +LH N IIH +L NVLL ++ KI+DFG S+++
Sbjct: 119 YFYQ-MLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 448 XXXXXLGYRAPE-LSKLKKA--NTKTDVYSLGVTILELLTGKSP 488
Y APE L + A N D +SLGV + L+G P
Sbjct: 177 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 16/222 (7%)
Query: 277 DGPLMFTADDLLCATAEIMGKSTYGTVYKA-TLEDGSQVAVKRLR-EKITKG----QREF 330
D ++F LC E++GK + V + E G Q AVK + K T +
Sbjct: 19 DDDVLFEDVYELC---EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 75
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPI-DWPTR 389
+ E S+ ++HP+++ L Y G +VF++M L + R +
Sbjct: 76 KREASICHMLKHPHIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXX 446
++ + L + H N NIIH ++ VLL ++S K+ FG++ +
Sbjct: 135 SHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA 192
Query: 447 XXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ APE+ K + DV+ GV + LL+G P
Sbjct: 193 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 294 IMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFES--EVSLLGKIRHPNLLALRA 350
++G+ YG V AT + G VA+K++ E K + E+ +L +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITI-- 74
Query: 351 YYLGPKGEKLLVFD--YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + F+ Y+ + T LH + I R + LH + N
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS-N 132
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---------YRAPE 459
+IH +L SN+L++ + + K+ DFGL+R++ G YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 460 LS-KLKKANTKTDVYSLGVTILELL 483
+ K + DV+S G + EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 294 IMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFES--EVSLLGKIRHPNLLALRA 350
++G+ YG V AT + G VA+K++ E K + E+ +L +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITI-- 74
Query: 351 YYLGPKGEKLLVFD--YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + F+ Y+ + T LH + I R + LH + N
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS-N 132
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---------YRAPE 459
+IH +L SN+L++ + + K+ DFGL+R++ G YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 460 LS-KLKKANTKTDVYSLGVTILELL 483
+ K + DV+S G + EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 11/167 (6%)
Query: 329 EFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATF---LHARGPETPID 385
+F++E+ ++ I++ L + E ++++YM + S+ F
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 386 WPTRM--KIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXX 443
P ++ IIK + ++H+ +NI H ++ SN+L+D + K+SDFG S M
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 444 XXXXXXXXXLGYRAPELSKLKKANT--KTDVYSLGVTILELLTGKSP 488
+ PE + + K D++SLG+ + + P
Sbjct: 208 KGSRGTYEFM---PPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 294 IMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFES--EVSLLGKIRHPNLLALRA 350
++G+ YG V AT + G VA+K++ E K + E+ +L +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITI-- 74
Query: 351 YYLGPKGEKLLVFD--YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + F+ Y+ + T LH + I R + LH + N
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS-N 132
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLG---------YRAPE 459
+IH +L SN+L++ + + K+ DFGL+R++ G YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 460 LS-KLKKANTKTDVYSLGVTILELL 483
+ K + DV+S G + EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 16/222 (7%)
Query: 277 DGPLMFTADDLLCATAEIMGKSTYGTVYKA-TLEDGSQVAVKRLR-EKITKG----QREF 330
D ++F LC E++GK + V + E G Q AVK + K T +
Sbjct: 17 DDDVLFEDVYELC---EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 73
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPI-DWPTR 389
+ E S+ ++HP+++ L Y G +VF++M L + R +
Sbjct: 74 KREASICHMLKHPHIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXX 446
++ + L + H N NIIH ++ VLL ++S K+ FG++ +
Sbjct: 133 SHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA 190
Query: 447 XXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
+ APE+ K + DV+ GV + LL+G P
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 399 GLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAP 458
GL L S + II+ +L NV+LD + KI+DFG+ + Y AP
Sbjct: 454 GLFFLQS-KGIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAP 511
Query: 459 ELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQ 499
E+ + D ++ GV + E+L G++P E + EL Q
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 552
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D K++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 180
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 181 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 237
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQRE----FESEVSLLGKIRHPNLLAL 348
+++G+ +G V +++ ++ ++ K +R F E +L + AL
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
Y + LV DY G L T L + P D I M + +H +
Sbjct: 140 H-YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED--MARFYIGEMVLAIDSIH-QLH 195
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK-----L 463
+H ++ NVLLD + + +++DFG M Y +PE+ + +
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 464 KKANTKTDVYSLGVTILELLTGKSP 488
K + D +SLGV + E+L G++P
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRM 390
E+E+ +L K+ HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 243
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXX 447
+ M + +LH N IIH +L NVLL ++ KI+DFG S+++
Sbjct: 244 YFYQ-MLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301
Query: 448 XXXXXLGYRAPE-LSKLKKA--NTKTDVYSLGVTILELLTGKSP 488
Y APE L + A N D +SLGV + L+G P
Sbjct: 302 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 331 ESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRM 390
E+E+ +L K+ HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 257
Query: 391 KIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXX 447
+ M + +LH N IIH +L NVLL ++ KI+DFG S+++
Sbjct: 258 YFYQ-MLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 315
Query: 448 XXXXXLGYRAPE-LSKLKKA--NTKTDVYSLGVTILELLTGKSP 488
Y APE L + A N D +SLGV + L+G P
Sbjct: 316 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQRE----FESEVSLLGKIRHPNLLAL 348
+++G+ +G V +++ ++ ++ K +R F E +L + AL
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
Y + LV DY G L T L + P D I M + +H +
Sbjct: 156 H-YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED--MARFYIGEMVLAIDSIH-QLH 211
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK-----L 463
+H ++ NVLLD + + +++DFG M Y +PE+ + +
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 464 KKANTKTDVYSLGVTILELLTGKSP 488
K + D +SLGV + E+L G++P
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 136
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 137 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 193
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 136
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 137 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 193
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 82
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 136
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 137 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 193
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 194 MGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 135
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 136 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 192
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ +E E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D +++DFGL++ + Y APE+ K N
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 31 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 87
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 141
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 142 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 198
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 143
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 144 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 200
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 143
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 144 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 200
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 93
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 147
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 148 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 204
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A LE VA+K+L T +R + E+ L+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 349 RAYYLGPKG-----EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + +V + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 200 MGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 109/287 (37%), Gaps = 42/287 (14%)
Query: 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQRE-FESEVSLLGKIRHPNLLALRA 350
+ +G+ +G V++A + D A+KR+R + RE EV L K+ HP ++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 351 YYL--------GPKGEKLLVFDYMP---HGSLATFLHARGPETPIDWPTRMKIIKGMTRG 399
+L P K+ ++ M +L +++ R + + I +
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 400 LLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXX--------XXXXX 451
+ LHS + ++H +L SN+ K+ DFGL M
Sbjct: 131 VEFLHS-KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 452 XLG---YRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEE 508
+G Y +PE + K D++SLG+ + ELL S + E
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFS-----------------TQME 232
Query: 509 WTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQ 555
+ D+ ++ P + + + PSP RPE + +++
Sbjct: 233 RVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQMLXGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ ++G V++ + G Q AVK++R ++ + E V+ G + P ++ L Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR----VEELVACAG-LSSPRIVPL--YGA 132
Query: 354 GPKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+G + +F + + GSL + G P D + + GL +LH+ I+HG
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGC-LPED--RALYYLGQALEGLEYLHTR-RILHG 188
Query: 413 NLTSSNVLLD-DSTNAKISDFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSKLKKAN 467
++ + NVLL D + A + DFG + + + + APE+ K +
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 468 TKTDVYSLGVTILELLTGKSP 488
K D++S +L +L G P
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHP 269
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTGK--SPGEPLNGAELPQW 500
D++S+G + E++ K PG + QW
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDY----IDQW 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQMLXGIKHL 135
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 136 HS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 192
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ ++G V++ + G Q AVK++R ++ + E V+ G + P ++ L Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR----VEELVACAG-LSSPRIVPL--YGA 118
Query: 354 GPKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+G + +F + + GSL + G P D + + GL +LH+ I+HG
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGC-LPED--RALYYLGQALEGLEYLHTR-RILHG 174
Query: 413 NLTSSNVLLD-DSTNAKISDFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSKLKKAN 467
++ + NVLL D + A + DFG + + + + APE+ K +
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 468 TKTDVYSLGVTILELLTGKSP 488
K D++S +L +L G P
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHP 255
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQMLXGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 295 MGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYY 352
+G+ ++ K + +Q AVK + +++ ++ E++ L HPN++ L +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEVF 75
Query: 353 LGPKGEKLLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ LV + + G L + + ET + I++ + + H+H + ++
Sbjct: 76 -HDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMH-DVGVV 128
Query: 411 HGNLTSSNVLL---DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKAN 467
H +L N+L +D+ KI DFG +RL L Y APEL +
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARL-KPPDNQPLKTPCFTLHYAAPELLNQNGYD 187
Query: 468 TKTDVYSLGVTILELLTGKSP 488
D++SLGV + +L+G+ P
Sbjct: 188 ESCDLWSLGVILYTMLSGQVP 208
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 93
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 149
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE----YLAPEIILSKGYNKAV 205
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 206 DWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|1XEU|A Chain A, Crystal Structure Of Internalin C From Listeria
Monocytogenes
Length = 263
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 16 ASLGKLSELQEISLSHNKISGVMP-SDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVS 74
A + + L+E+ LSHN+IS + P DL +L L + +NG +P+ + L
Sbjct: 57 AGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNG-IPS-----ACLSR 110
Query: 75 LTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLS 131
L L++N L D DSL L NL +L+++ N++ + +G +S L +LDL N+++
Sbjct: 111 LFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEIT 163
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 295 MGKSTYGTV---YKATLEDGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLAL 348
+G G V Y A L+ VA+K+L T +R + E+ L+ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 349 RAYYLGPK-----GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHL 403
+ K + LV + M +L + + +D ++ M G+ HL
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQMLCGIKHL 142
Query: 404 HSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 463
HS IIH +L SN+++ KI DFGL+R YRAPE+
Sbjct: 143 HS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 464 KKANTKTDVYSLGVTILELLTGK 486
D++S+G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYL 353
+G+ ++G V++ + G Q AVK++R ++ + E V+ G + P ++ L Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR----VEELVACAG-LSSPRIVPL--YGA 134
Query: 354 GPKGEKLLVF-DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHG 412
+G + +F + + GSL + G P D + + GL +LH+ I+HG
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGC-LPED--RALYYLGQALEGLEYLHTR-RILHG 190
Query: 413 NLTSSNVLLD-DSTNAKISDFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSKLKKAN 467
++ + NVLL D + A + DFG + + + + APE+ K +
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 468 TKTDVYSLGVTILELLTGKSP 488
K D++S +L +L G P
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHP 271
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
Y +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D K++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 323 ITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYMPHGS-------LATF 374
I K +R+ E+ +L + +HPN++ L+ Y G+ + V + G F
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVY--DDGKYVYVVTELXKGGELLDKILRQKF 112
Query: 375 LHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVL-LDDSTN---AKIS 430
R ++ +T+ + +LH+ + ++H +L SN+L +D+S N +I
Sbjct: 113 FSEREASA---------VLFTITKTVEYLHA-QGVVHRDLKPSNILYVDESGNPESIRIC 162
Query: 431 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488
DFG ++ + + APE+ + + + D++SLGV + LTG +P
Sbjct: 163 DFGFAKQLRAENGLLXTPCYTA-NFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 3 LALQYNNLSG-RIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
L L +NNLS R + +L+ L + LSHN ++ + + LR LD S N ++
Sbjct: 44 LDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTL 103
Query: 62 LPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTI--GN-IS 118
FS+L +L L L +N++ ++ + + L L L +NQIS I GN +
Sbjct: 104 DEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLP 163
Query: 119 TLTILDLSQNKL 130
L +LDLS NKL
Sbjct: 164 KLMLLDLSSNKL 175
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 11/210 (5%)
Query: 294 IMGKSTYGTVYKATLEDGSQV-AVKRLREKITKGQREF---ESEVSLLGKI-RHPNLLAL 348
++G+ +Y V L+ ++ A+K +++++ + ++E + + HP L+ L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + V +Y+ G L F R + P + + LH
Sbjct: 87 HSCF-QTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH---ERG 141
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L NVLLD + K++D+G+ + Y APE+ + +
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 200
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAELP 498
D ++LGV + E++ G+SP + + ++ P
Sbjct: 201 SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQRE----FESEVSLLGKI-RHPNLLAL 348
++G+ +Y V L+ ++ R+ +K E ++E + + HP L+ L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + V +Y+ G L F R + P + + LH
Sbjct: 119 HSCF-QTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH---ERG 173
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L NVLLD + K++D+G+ + Y APE+ + +
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGF 232
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAELP 498
D ++LGV + E++ G+SP + + ++ P
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 11/210 (5%)
Query: 294 IMGKSTYGTVYKATLEDGSQV-AVKRLREKITKGQREF---ESEVSLLGKI-RHPNLLAL 348
++G+ +Y V L+ ++ A+K +++++ + ++E + + HP L+ L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN 408
+ + + V +Y+ G L F R + P + + LH
Sbjct: 72 HSCF-QTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH---ERG 126
Query: 409 IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANT 468
II+ +L NVLLD + K++D+G+ + Y APE+ + +
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 185
Query: 469 KTDVYSLGVTILELLTGKSPGEPLNGAELP 498
D ++LGV + E++ G+SP + + ++ P
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 215
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D K++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
Query: 279 PLMFTADDLLCATAEIMGKSTYGTVYKATLEDGSQV-AVKRLREKITKGQREF---ESEV 334
PL DLL ++G+ +Y V L+ ++ A+K +++++ + ++E
Sbjct: 5 PLGLQDFDLL----RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEK 60
Query: 335 SLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKII 393
+ + HP L+ L + + + V +Y+ G L F R + P +
Sbjct: 61 HVFEQASNHPFLVGLHSCF-QTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE 118
Query: 394 KGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXL 453
+ LH II+ +L NVLLD + K++D+G+ +
Sbjct: 119 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTP 174
Query: 454 GYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP 498
Y APE+ + + D ++LGV + E++ G+SP + + ++ P
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 314 VAVKRLR--EKITKG-QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGS 370
VAVK + EKI + +RE + SL RHPN++ + L P +V +Y G
Sbjct: 46 VAVKYIERGEKIDENVKREIINHRSL----RHPNIVRFKEVILTPT-HLAIVMEYASGGE 100
Query: 371 LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST--NAK 428
L + G + + R + + G+ + H+ + + H +L N LLD S K
Sbjct: 101 LFERICNAGRFSEDE--ARF-FFQQLISGVSYCHAMQ-VCHRDLKLENTLLDGSPAPRLK 156
Query: 429 ISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT-DVYSLGVTILELLTGKS 487
I DFG S+ Y APE+ K+ + K DV+S GVT+ +L G
Sbjct: 157 ICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 214
Query: 488 PGE 490
P E
Sbjct: 215 PFE 217
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 314 VAVKRLR--EKITKG-QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGS 370
VAVK + EKI +RE + SL RHPN++ + L P +V +Y G
Sbjct: 47 VAVKYIERGEKIAANVKREIINHRSL----RHPNIVRFKEVILTPT-HLAIVMEYASGGE 101
Query: 371 LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST--NAK 428
L + G + + R + + G+ + H+ + + H +L N LLD S K
Sbjct: 102 LFERICNAGRFSEDE--ARF-FFQQLISGVSYCHAMQ-VCHRDLKLENTLLDGSPAPRLK 157
Query: 429 ISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT-DVYSLGVTILELLTGKS 487
I DFG S+ Y APE+ K+ + K DV+S GVT+ +L G
Sbjct: 158 ICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 488 PGE 490
P E
Sbjct: 216 PFE 218
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D K++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D K++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 12/217 (5%)
Query: 277 DGPLMFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSL 336
D P+M +D + +G +G + +++ + E+ K + E+
Sbjct: 11 DLPIMHDSDRY--ELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIIN 68
Query: 337 LGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGM 396
+RHPN++ + L P +V +Y G L + G + + R + +
Sbjct: 69 HRSLRHPNIVRFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDE--ARF-FFQQL 124
Query: 397 TRGLLHLHSNENIIHGNLTSSNVLLDDST--NAKISDFGLSRLMXXXXXXXXXXXXXXLG 454
G+ + H+ + + H +L N LLD S KI+DFG S+
Sbjct: 125 ISGVSYAHAMQ-VAHRDLKLENTLLDGSPAPRLKIADFGYSK--ASVLHSQPKSAVGTPA 181
Query: 455 YRAPELSKLKKANTKT-DVYSLGVTILELLTGKSPGE 490
Y APE+ K+ + K DV+S GVT+ +L G P E
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 100
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 156
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 212
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 213 DWWALGVLIYEMAAGYPP 230
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D K++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 22/247 (8%)
Query: 285 DDLLCATAEIMGKSTYGTVYKA-TLEDGSQVAVKRLREKITKGQREFESEVSLLGKIR-H 342
+D+ T+E++G+ Y V A +L++G + AVK + ++ + EV L + + +
Sbjct: 11 EDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 343 PNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLH 402
N+L L ++ LVF+ + GS+ + + + ++++ + L
Sbjct: 71 KNILELIEFF-EDDTRFYLVFEKLQGGSILAHIQK---QKHFNEREASRVVRDVAAALDF 126
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNA---KISDFGLS---RLMXXXXXXXXXXXXXXLG-- 454
LH+ + I H +L N+L + KI DF L +L G
Sbjct: 127 LHT-KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 455 -YRAPELSKLKK-----ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEE 508
Y APE+ ++ + + D++SLGV + +L+G P GA+ W V
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCG-WDRGEVCRV 244
Query: 509 WTNEVFD 515
N++F+
Sbjct: 245 CQNKLFE 251
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 327 QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDW 386
QRE + SL RHPN++ + L P ++ +Y G L + G + +
Sbjct: 64 QREIINHRSL----RHPNIVRFKEVILTPT-HLAIIMEYASGGELYERICNAGRFSEDE- 117
Query: 387 PTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST--NAKISDFGLSRLMXXXXXX 444
R + + G+ + HS + I H +L N LLD S KI DFG S+
Sbjct: 118 -ARF-FFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHS 172
Query: 445 XXXXXXXXLGYRAPELSKLKKANTK-TDVYSLGVTILELLTGKSPGE 490
Y APE+ ++ + K DV+S GVT+ +L G P E
Sbjct: 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 128
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G + P + +LHS ++I
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 184
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 240
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 241 DWWALGVLIYEMAAGYPP 258
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 26/140 (18%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
++L L+ LQ++S S N+++ + P L L+ L LD S N ++ S+ A +NL SL++
Sbjct: 145 SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 202
Query: 75 -------------------LTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIG 115
L+L N L D + +L L NL+ L+L NQIS P +
Sbjct: 203 TNNQISDITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LS 258
Query: 116 NISTLTILDLSQNKLSGEIP 135
++ LT L L N++S P
Sbjct: 259 GLTKLTELKLGANQISNISP 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L++L +I +++N+I+ + P L L+ L L N I P NL++L L L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 136
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLS 131
SN + D + +L L +L L+ NQ++ P + N++TL LD+S NK+S
Sbjct: 137 SSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N +S P L L++L E+ L N+IS + P L L+ L L+ + N +
Sbjct: 244 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 299
Query: 63 PASFSNLSSLVSLTLESNNLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P SNL +L LTL NN+ D + SL KL L N K + + S++ N++ +
Sbjct: 300 P--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-----SSLANLTNIN 352
Query: 122 ILDLSQNKLSGEIP 135
L N++S P
Sbjct: 353 WLSAGHNQISDLTP 366
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 26/140 (18%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
++L L+ LQ++S S N+++ + P L L+ L LD S N ++ S+ A +NL SL++
Sbjct: 145 SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 202
Query: 75 -------------------LTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIG 115
L+L N L D + +L L NL+ L+L NQIS P +
Sbjct: 203 TNNQISDITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LS 258
Query: 116 NISTLTILDLSQNKLSGEIP 135
++ LT L L N++S P
Sbjct: 259 GLTKLTELKLGANQISNISP 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L++L +I +++N+I+ + P L L+ L L N I P NL++L L L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 136
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLS 131
SN + D + +L L +L L+ NQ++ P + N++TL LD+S NK+S
Sbjct: 137 SSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N +S P L L++L E+ L N+IS + P L L+ L L+ + N +
Sbjct: 244 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 299
Query: 63 PASFSNLSSLVSLTLESNNLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P SNL +L LTL NN+ D + SL KL L N K + + S++ N++ +
Sbjct: 300 P--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDV-----SSLANLTNIN 352
Query: 122 ILDLSQNKLSGEIP 135
L N++S P
Sbjct: 353 WLSAGHNQISDLTP 366
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L++L +I +++N+I+ + P L L+ L L N I P NL++L L L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 136
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLS 131
SN + D + +L L +L LN NQ++ P + N++TL LD+S NK+S
Sbjct: 137 SSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 26/140 (18%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
++L L+ LQ+++ S N+++ + P L L+ L LD S N ++ S+ A +NL SL++
Sbjct: 145 SALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 202
Query: 75 -------------------LTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIG 115
L+L N L D + +L L NL+ L+L NQIS P +
Sbjct: 203 TNNQISDITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LS 258
Query: 116 NISTLTILDLSQNKLSGEIP 135
++ LT L L N++S P
Sbjct: 259 GLTKLTELKLGANQISNISP 278
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N +S P L L++L E+ L N+IS + P L L+ L L+ + N +
Sbjct: 244 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 299
Query: 63 PASFSNLSSLVSLTLESNNLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P SNL +L LTL NN+ D + SL KL L N K + + S++ N++ +
Sbjct: 300 P--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-----SSLANLTNIN 352
Query: 122 ILDLSQNKLSGEIP 135
L N++S P
Sbjct: 353 WLSAGHNQISDLTP 366
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y P G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D K++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 100
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+P G + + L G P + +LHS ++I
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 156
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 212
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 213 DWWALGVLIYEMAAGYPP 230
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 292 AEIMGKSTYGTVYKATLEDGSQVAVKR--------LREKITKGQREFESEVSLLGKIRHP 343
+++G+ +YG V K L+ S+ +R +I G+ + E+ LL ++RH
Sbjct: 10 GDLLGEGSYGKV-KEVLD--SETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 344 NLLAL-RAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLH 402
N++ L Y K + +V +Y G + L + PE + GL +
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEY 124
Query: 403 LHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR-LMXXXXXXXXXXXXXXLGYRAPELS 461
LHS + I+H ++ N+LL KIS G++ L ++ PE++
Sbjct: 125 LHS-QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIA 183
Query: 462 KLKK--ANTKTDVYSLGVTILELLTGKSPGE 490
+ K D++S GVT+ + TG P E
Sbjct: 184 NGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 15/183 (8%)
Query: 324 TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHG-SLATFLHARGPET 382
T+ QRE + G+++ P+++ + + G +L V + +G LA L +GP
Sbjct: 79 TRXQREARTA----GRLQEPHVVPIHDF--GEIDGQLYVDXRLINGVDLAAXLRRQGPLA 132
Query: 383 PIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXX 442
P P + I++ + L H ++ N+L+ A + DFG++
Sbjct: 133 P---PRAVAIVRQIG-SALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188
Query: 443 XXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP--GEPLN--GAELP 498
L Y APE A + D+Y+L + E LTG P G+ L+ GA +
Sbjct: 189 LTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHIN 248
Query: 499 QWV 501
Q +
Sbjct: 249 QAI 251
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V +E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 304 YKATLEDGSQVAVKRLR-EKITKGQREF-ESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361
YK T G V V+R+ E + F + E+ + HPN++ RA ++ E +
Sbjct: 32 YKPT---GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWV 87
Query: 362 VFDYMPHGS----LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSS 417
V +M +GS + T E I + I++G+ + L ++H + +H ++ +S
Sbjct: 88 VTSFMAYGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIH-HMGYVHRSVKAS 141
Query: 418 NVLLDDSTNAKISDFGLSRLMXXXXXXXXX--------XXXXXLGYRAPEL--SKLKKAN 467
++L+ S + K+ GL + L + +PE+ L+ +
Sbjct: 142 HILI--SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYD 199
Query: 468 TKTDVYSLGVTILELLTGKSPGEPLNGAEL 497
K+D+YS+G+T EL G P + + ++
Sbjct: 200 AKSDIYSVGITACELANGHVPFKDMPATQM 229
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 304 YKATLEDGSQVAVKRLR-EKITKGQREF-ESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361
YK T G V V+R+ E + F + E+ + HPN++ RA ++ E +
Sbjct: 48 YKPT---GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWV 103
Query: 362 VFDYMPHGS----LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSS 417
V +M +GS + T E I + I++G+ + L ++H + +H ++ +S
Sbjct: 104 VTSFMAYGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIH-HMGYVHRSVKAS 157
Query: 418 NVLLDDSTNAKISDFGLSRLMXXXXXXXXX--------XXXXXLGYRAPEL--SKLKKAN 467
++L+ S + K+ GL + L + +PE+ L+ +
Sbjct: 158 HILI--SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYD 215
Query: 468 TKTDVYSLGVTILELLTGKSPGEPLNGAEL 497
K+D+YS+G+T EL G P + + ++
Sbjct: 216 AKSDIYSVGITACELANGHVPFKDMPATQM 245
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMP-SDLGRLSRLRILDFSYNAING 60
+L L +N + LG L +L+ + H+ + + S L L LD S+
Sbjct: 377 YLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQIL-DSLDKLHNLSVLNLKRNQISGHIPSTIGNIST 119
+ F+ LSSL L + N+ + L D +L NL+ L+L + Q+ P+ ++S+
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495
Query: 120 LTILDLSQNKL 130
L +L+++ N+L
Sbjct: 496 LQVLNMASNQL 506
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L +N L S ELQ + LS +I + LS L L + N I
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI-SGHIPSTIGNISTLT 121
+FS LSSL L NL + L L LN+ N I S +P N++ L
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 122 ILDLSQNKL 130
LDLS NK+
Sbjct: 153 HLDLSSNKI 161
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
+ LS LQ++ ++ + +G L L+ L+ ++N I LP FSNL++L
Sbjct: 94 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 153
Query: 75 LTLESNNLDDQILDSLDKLHNL 96
L L SN + L LH +
Sbjct: 154 LDLSSNKIQSIYCTDLRVLHQM 175
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 21 LSELQEISLSHNKIS-GVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
LS L+ + ++ N +P L L LD S + P +F++LSSL L + S
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 80 NNLD---DQILDSLDKLHNL 96
N L D I D L L +
Sbjct: 504 NQLKSVPDGIFDRLTSLQKI 523
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 26/139 (18%)
Query: 14 IPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLV 73
IP +L + + EI L N I + P +LR +D S N I+ P +F L SL
Sbjct: 26 IPTNLPE--TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN 83
Query: 74 SLTL------------------------ESNNLDDQILDSLDKLHNLSVLNLKRNQISGH 109
SL L +N ++ +D+ LHNL++L+L N++
Sbjct: 84 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKINXLRVDAFQDLHNLNLLSLYDNKLQTI 143
Query: 110 IPSTIGNISTLTILDLSQN 128
T + + + L+QN
Sbjct: 144 AKGTFSPLRAIQTMHLAQN 162
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 7 YNNLSGRI-PASLGKLSELQEISLSHN-KISGVMPSDLGRLSRLRILDFSYNAINGSLPA 64
++N+ RI A+ L+ L+++ LS N ++ V P+ L RL L + P
Sbjct: 64 HSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG 123
Query: 65 SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILD 124
F L++L L L+ N L D+ L NL+ L L N+IS + +L L
Sbjct: 124 LFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183
Query: 125 LSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGPVPTSLA-------LKFNASSFVGNIQ- 176
L QN+++ P NNLS +LA L+ N + +V + +
Sbjct: 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243
Query: 177 ------LCGYSGSTPCPSPPAEKPKSRGRKLSTKD 205
L + GS+ +E P S ++L+ +D
Sbjct: 244 RPLWAWLQKFRGSS------SEVPCSLPQRLAGRD 272
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 25 QEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN---- 80
Q I L N+IS V + L IL N + A+F+ L+ L L L N
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG 132
++D L +LH L+L R + P ++ L L L N L
Sbjct: 95 SVDPATFHGLGRLH---TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L YN L G++PA G +L ++L++N+I+ + + G ++ L F++N + +
Sbjct: 335 LECLYNQLEGKLPA-FGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YI 392
Query: 63 PASFSNLSSLVSLTL-----ESNNLDDQILDSLD----KLHNLSVLNLKRNQISGHIPST 113
P F S V + E ++D + D LD K N+S +NL NQIS
Sbjct: 393 PNIFDAKSVSVXSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKEL 452
Query: 114 IGNISTLTILDLSQNKLSGEIP 135
S L+ ++L N L+ EIP
Sbjct: 453 FSTGSPLSSINLXGNXLT-EIP 473
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVL 420
+V +Y P G + + L G + P + +LHS ++I+ +L N+L
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLL 174
Query: 421 LDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLGVTIL 480
+D K++DFG ++ + Y APE+ K N D ++LGV I
Sbjct: 175 IDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 481 ELLTGKSP 488
E+ G P
Sbjct: 231 EMAAGYPP 238
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+L L YN L L+EL + L++N+++ + L++L L N + S
Sbjct: 63 WLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-S 121
Query: 62 LPAS-FSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIP----STIGN 116
LP+ F L+ L L L +N L + DKL NL L+L NQ+ +P +G
Sbjct: 122 LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGK 180
Query: 117 ISTLTIL 123
+ T+T+
Sbjct: 181 LQTITLF 187
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N L+ L++L ++ L N++ + RL++L+ L + N + S+
Sbjct: 88 LGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SI 146
Query: 63 PA-SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI 106
PA +F L++L +L+L +N L + D+L L + L NQ
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L LQ L+ A+ L++L ++L +N++ + L+ L L + N + SL
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASL 98
Query: 63 P-ASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P F +L+ L L L N L D+L L L L NQ+ ++ L
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 122 ILDLSQNKL 130
L LS N+L
Sbjct: 159 TLSLSTNQL 167
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 22 SELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81
++ +++ L ++ + + L++L L+ YN + F +L+ L +L L +N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPA 136
L L D L L L L NQ+ ++ L L L+ N+L IPA
Sbjct: 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPA 148
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 37/223 (16%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ-VAVK---RLREKITKGQREFESEVSLLGKIRHPNLLAL 348
++G+ +YG VY A ++ ++ VA+K R+ E + +R E+++L +++ ++ L
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIRL 92
Query: 349 RAYYLGPKGEKLLVFDYMPHG-SLATFLHARGPETPIDWPTRM--KIIKGMTRGLLHLHS 405
+ E LL FD + +A + +TPI + I+ + G +H
Sbjct: 93 HDLIIP---EDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHE 149
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXX----------------------- 442
+ IIH +L +N LL+ + KI DFGL+R +
Sbjct: 150 S-GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKN 208
Query: 443 -XXXXXXXXXXLGYRAPELSKLKKANTKT-DVYSLGVTILELL 483
YRAPEL L++ T + D++S G ELL
Sbjct: 209 LKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 7 YNNLSGRI-PASLGKLSELQEISLSHN-KISGVMPSDLGRLSRLRILDFSYNAINGSLPA 64
++N+ RI A+ L+ L+++ LS N ++ V P+ L RL L + P
Sbjct: 63 HSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG 122
Query: 65 SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILD 124
F L++L L L+ N L D+ L NL+ L L N+IS + +L L
Sbjct: 123 LFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 182
Query: 125 LSQNKLSGEIPAXXXXXXXXXXXXXXYNNLSGPVPTSLA-------LKFNASSFVGNIQ- 176
L QN+++ P NNLS +LA L+ N + +V + +
Sbjct: 183 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 242
Query: 177 ------LCGYSGSTPCPSPPAEKPKSRGRKLSTKD 205
L + GS+ +E P S ++L+ +D
Sbjct: 243 RPLWAWLQKFRGSS------SEVPCSLPQRLAGRD 271
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 25 QEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN---- 80
Q I L N+IS V + L IL N + A+F+ L+ L L L N
Sbjct: 34 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 93
Query: 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG 132
++D L +LH L+L R + P ++ L L L N L
Sbjct: 94 SVDPATFHGLGRLH---TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 142
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+L L YN L L+EL + L++N+++ + L++L L N + S
Sbjct: 63 WLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-S 121
Query: 62 LPAS-FSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIP----STIGN 116
LP+ F L+ L L L +N L + DKL NL L+L NQ+ +P +G
Sbjct: 122 LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGK 180
Query: 117 ISTLTIL 123
+ T+T+
Sbjct: 181 LQTITLF 187
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N L+ L++L ++ L N++ + RL++L+ L + N + S+
Sbjct: 88 LGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SI 146
Query: 63 PA-SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI 106
PA +F L++L +L+L +N L + D+L L + L NQ
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L LQ L+ A+ L++L ++L +N++ + L+ L L + N + SL
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASL 98
Query: 63 P-ASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P F +L+ L L L N L D+L L L L NQ+ ++ L
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 122 ILDLSQNKL 130
L LS N+L
Sbjct: 159 TLSLSTNQL 167
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 22 SELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81
++ +++ L ++ + + L++L L+ YN + F +L+ L +L L +N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPA 136
L L D L L L L NQ+ ++ L L L+ N+L IPA
Sbjct: 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPA 148
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L +N L S ELQ + LS +I + LS L L + N I
Sbjct: 34 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 93
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI-SGHIPSTIGNISTLT 121
+FS LSSL L NL + L L LN+ N I S +P N++ L
Sbjct: 94 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 153
Query: 122 ILDLSQNKL 130
LDLS NK+
Sbjct: 154 HLDLSSNKI 162
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
+ LS LQ++ ++ + +G L L+ L+ ++N I LP FSNL++L
Sbjct: 95 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 154
Query: 75 LTLESNNLDDQILDSLDKLHNL 96
L L SN + L LH +
Sbjct: 155 LDLSSNKIQSIYCTDLRVLHQM 176
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 26/139 (18%)
Query: 14 IPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLV 73
IP +L + + EI L N I + P +LR +D S N I+ P +F L SL
Sbjct: 26 IPTNLPE--TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN 83
Query: 74 SLTL------------------------ESNNLDDQILDSLDKLHNLSVLNLKRNQISGH 109
SL L +N ++ +D+ LHNL++L+L N++
Sbjct: 84 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 143
Query: 110 IPSTIGNISTLTILDLSQN 128
T + + + L+QN
Sbjct: 144 AKGTFSPLRAIQTMHLAQN 162
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L +N L S ELQ + LS +I + LS L L + N I
Sbjct: 35 LDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 94
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI-SGHIPSTIGNISTLT 121
+FS LSSL L NL + L L LN+ N I S +P N++ L
Sbjct: 95 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 154
Query: 122 ILDLSQNKL 130
LDLS NK+
Sbjct: 155 HLDLSSNKI 163
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
+ LS LQ++ ++ + +G L L+ L+ ++N I LP FSNL++L
Sbjct: 96 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 155
Query: 75 LTLESNNLDDQILDSLDKLHNL 96
L L SN + L LH +
Sbjct: 156 LDLSSNKIQSIYCTDLRVLHQM 177
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 314 VAVKRLR--EKITKG-QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGS 370
VAVK + EKI + +RE + SL RHPN++ + L P +V +Y G
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSL----RHPNIVRFKEVILTPT-HLAIVMEYASGGE 101
Query: 371 LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST--NAK 428
L + G + + R + + G+ + H+ + + H +L N LLD S K
Sbjct: 102 LFERICNAGRFSEDE--ARF-FFQQLISGVSYCHAMQ-VCHRDLKLENTLLDGSPAPRLK 157
Query: 429 ISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT-DVYSLGVTILELLTGKS 487
I FG S+ Y APE+ K+ + K DV+S GVT+ +L G
Sbjct: 158 ICAFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 488 PGE 490
P E
Sbjct: 216 PFE 218
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 94
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 150
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D+ +++DFG ++ + Y APE+ K N
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 206
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 207 DWWALGVLIYEMAAGYPP 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKR-LREKITKGQREFESEVSLLGKI-RHPNLLALRA 350
+++G GT+ + D VAVKR L E + R EV LL + HPN++
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR----EVQLLRESDEHPNVI---R 82
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWP----TRMKIIKGMTRGLLHLHSN 406
Y+ K + F Y+ A L + D+ + +++ T GL HLHS
Sbjct: 83 YFCTEKDRQ---FQYIAIELCAATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHSL 137
Query: 407 ENIIHGNLTSSNVLL-----DDSTNAKISDFGLSRLMXXXXXXXXXXXXX--XLGYRAPE 459
NI+H +L N+L+ A ISDFGL + + G+ APE
Sbjct: 138 -NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 460 -LSKLKKAN--TKTDVYSLGVTILELLT-GKSP 488
LS+ K N D++S G +++ G P
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQREFESEVSLLGKIRHP------NL 345
+++GK ++G V KA Q VA+K +R + + R+ E+ +L +R N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATF-LHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
+ + + + + F+ + S+ + L + P K + + L LH
Sbjct: 162 IHMLENFTF-RNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 405 SNENIIHGNLTSSNVLLDDS--TNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK 462
N IIH +L N+LL + K+ DFG S YRAPE+
Sbjct: 218 KNR-IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRFYRAPEVIL 272
Query: 463 LKKANTKTDVYSLGVTILELLTGKS--PGE 490
+ D++SLG + ELLTG PGE
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L +N L S ELQ + LS +I + LS L L + N I
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI-SGHIPSTIGNISTLT 121
+FS LSSL L NL + L L LN+ N I S +P N++ L
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 122 ILDLSQNKL 130
LDLS NK+
Sbjct: 153 HLDLSSNKI 161
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
+ LS LQ++ ++ + +G L L+ L+ ++N I LP FSNL++L
Sbjct: 94 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 153
Query: 75 LTLESNNLDDQILDSLDKLHNL 96
L L SN + L LH +
Sbjct: 154 LDLSSNKIQSIYCTDLRVLHQM 175
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQREFESEVSLLGKIRHP------NL 345
+++GK ++G V KA Q VA+K +R + + R+ E+ +L +R N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATF-LHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
+ + + + + F+ + S+ + L + P K + + L LH
Sbjct: 162 IHMLENFTF-RNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 405 SNENIIHGNLTSSNVLLDDS--TNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK 462
N IIH +L N+LL + K+ DFG S YRAPE+
Sbjct: 218 KNR-IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRFYRAPEVIL 272
Query: 463 LKKANTKTDVYSLGVTILELLTGKS--PGE 490
+ D++SLG + ELLTG PGE
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L +N L S ELQ + LS +I + LS L L + N I
Sbjct: 34 LDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 93
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI-SGHIPSTIGNISTLT 121
+FS LSSL L NL + L L LN+ N I S +P N++ L
Sbjct: 94 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 153
Query: 122 ILDLSQNKL 130
LDLS NK+
Sbjct: 154 HLDLSSNKI 162
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
+ LS LQ++ ++ + +G L L+ L+ ++N I LP FSNL++L
Sbjct: 95 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 154
Query: 75 LTLESNNLDDQILDSLDKLHNL 96
L L SN + L LH +
Sbjct: 155 LDLSSNKIQSIYCTDLRVLHQM 176
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 294 IMGKSTYGTVYKATLEDGSQ-VAVK---RLREKITKGQREFESEVSLLGKIRHPNLLALR 349
++G+ +YG VY A ++ + VA+K R+ E + +R E+++L +++ ++ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIRLY 91
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLH-LHSNEN 408
+ + LL FD L L + + T + + + + +L+ L EN
Sbjct: 92 DLIIP---DDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 409 ------IIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXX-------------------- 442
IIH +L +N LL+ + K+ DFGL+R +
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 443 -XXXXXXXXXXLGYRAPELSKLKKANTKT-DVYSLGVTILELL 483
YRAPEL L++ TK+ D++S G ELL
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 314 VAVKRLR--EKITKG-QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGS 370
VAVK + EKI + +RE + SL RHPN++ + L P +V +Y G
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSL----RHPNIVRFKEVILTPT-HLAIVMEYASGGE 101
Query: 371 LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST--NAK 428
L + G + + R + + G+ + H+ + + H +L N LLD S K
Sbjct: 102 LFERICNAGRFSEDE--ARF-FFQQLISGVSYCHAMQ-VCHRDLKLENTLLDGSPAPRLK 157
Query: 429 ISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT-DVYSLGVTILELLTGKS 487
I FG S+ Y APE+ K+ + K DV+S GVT+ +L G
Sbjct: 158 ICAFGYSK--SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 488 PGE 490
P E
Sbjct: 216 PFE 218
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L +N L S ELQ + LS +I + LS L L + N I
Sbjct: 35 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 94
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI-SGHIPSTIGNISTLT 121
+FS LSSL L NL + L L LN+ N I S +P N++ L
Sbjct: 95 LGAFSGLSSLQKLVALETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 154
Query: 122 ILDLSQNKL 130
LDLS NK+
Sbjct: 155 HLDLSSNKI 163
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
+ LS LQ++ ++ + +G L L+ L+ ++N I LP FSNL++L
Sbjct: 96 GAFSGLSSLQKLVALETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 155
Query: 75 LTLESNNLDDQILDSLDKLHNL 96
L L SN + L LH +
Sbjct: 156 LDLSSNKIQSIYCTDLRVLHQM 177
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 128
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 184
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE----YLAPEIILSKGYNKAV 240
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 241 DWWALGVLIYEMAAGYPP 258
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 22 SELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81
S + ++L+HN++ + P++ R S+L ILD +N+I+ P L L L L+ N
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 84
Query: 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG 132
L + NL+ L+L N I + N L LDLS N LS
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSS 135
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 22 SELQEISLSHNKISGVMPSDLG--RLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
+ +Q +SL++N++ S + + L LD SYN ++ SFS L SL L+LE
Sbjct: 222 TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEY 281
Query: 80 NNLDDQILDSLDKLHNLSVLNLKR 103
NN+ S L NL L+LKR
Sbjct: 282 NNIQRLSPRSFYGLSNLRYLSLKR 305
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 20 KLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
K + L ++ LS+N + V L LR L YN I P SF LS+L L+L+
Sbjct: 246 KWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKR 305
Query: 80 N------------NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQ 127
N+DD S L L LN+ N I +T + +L L LS+
Sbjct: 306 AFTKQSVSLASHPNIDDF---SFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSK 362
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 63/158 (39%), Gaps = 35/158 (22%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISL------------SHNKISGVMPSDLGRLSRLR 49
+L+L+YNN+ P S LS L+ +SL SH I L L
Sbjct: 276 YLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDF---SFQWLKYLE 332
Query: 50 ILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHN----------LSVL 99
L+ N I + +F+ L SL L+L + SL L N L L
Sbjct: 333 YLNMDDNNIPSTKSNTFTGLVSLKYLSLS------KTFTSLQTLTNETFVSLAHSPLLTL 386
Query: 100 NLKRNQISGHIPSTIGNISTLTILDLSQN----KLSGE 133
NL +N IS T + L ILDL N KLSG+
Sbjct: 387 NLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQ 424
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 15 PASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAI-------NGSLPASF- 66
P+ L L + LS+N I+ + L L L ILDF +N + N P +F
Sbjct: 473 PSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFL 532
Query: 67 SNLSSLVSLTLESNNLDD 84
LS L L LESN LD+
Sbjct: 533 KGLSHLHILNLESNGLDE 550
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 30 SHNKISGVMPSDLGRL--SRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQIL 87
+ NKI + +L L S LR LD S N + P F + L +L L + L+ +
Sbjct: 153 AKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLT 212
Query: 88 DSLD-KLHNLSV--LNLKRNQISGHIPSTIGNI--STLTILDLSQNKL 130
+ L +L N S+ L+L NQ+ ST + + LT LDLS N L
Sbjct: 213 EKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNL 260
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 19/208 (9%)
Query: 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQRE----FESEVSLLGKIRHPNLLAL 348
+++G+ +G V L++ +V ++ K +R F E +L + L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 349 RAYYLGPKGEKLLVFDYMPHGSLATFL---HARGPETPIDWPTRMKIIKGMTRGLLHLHS 405
Y LV DY G L T L R PE + +I + LH
Sbjct: 140 H-YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY-- 196
Query: 406 NENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKK 465
+H ++ N+L+D + + +++DFG + Y +PE+ + +
Sbjct: 197 ----VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 466 ANT-----KTDVYSLGVTILELLTGKSP 488
+ D +SLGV + E+L G++P
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 108
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 164
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 220
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L+ L+ + +S NK+S + S L +L+ L L + N I+ P L++L L+L
Sbjct: 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSL 228
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135
N L D + +L L NL+ L+L NQIS P + ++ LT L L N++S P
Sbjct: 229 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 282
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N +S P L L++L E+ L N+IS + P L L+ L L+ + N +
Sbjct: 248 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 303
Query: 63 PASFSNLSSLVSLTLESNNLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P SNL +L LTL NN+ D + SL KL L N K + + S++ N++ +
Sbjct: 304 P--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-----SSLANLTNIN 356
Query: 122 ILDLSQNKLSGEIP 135
L N++S P
Sbjct: 357 WLSAGHNQISDLTP 370
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 25/130 (19%)
Query: 21 LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80
L+ L +I+ S+N+++ + P L L++L + + N I P +NL++L LTL +N
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 81 NLDDQILDSLDKLHNLSVLNLKRNQIS----------------GHIPSTI---GNISTLT 121
+ D +D L L NL+ L L N IS G+ + + N++TL
Sbjct: 123 QITD--IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLE 180
Query: 122 ILDLSQNKLS 131
LD+S NK+S
Sbjct: 181 RLDISSNKVS 190
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L+ L+ + +S NK+S + S L +L+ L L + N I+ P L++L L+L
Sbjct: 172 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSL 227
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135
N L D + +L L NL+ L+L NQIS P + ++ LT L L N++S P
Sbjct: 228 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 281
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 25/130 (19%)
Query: 21 LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80
L+ L +I+ S+N+++ + P L L++L + + N I P +NL++L LTL +N
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 81 NLDDQILDSLDKLHNLSVLNLKRNQIS----------------GHIPSTI---GNISTLT 121
+ D +D L L NL+ L L N IS G+ + + N++TL
Sbjct: 122 QITD--IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLE 179
Query: 122 ILDLSQNKLS 131
LD+S NK+S
Sbjct: 180 RLDISSNKVS 189
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N +S P L L++L E+ L N+IS + P L L+ L L+ + N +
Sbjct: 247 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 302
Query: 63 PASFSNLSSLVSLTLESNNLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P SNL +L LTL NN+ D + SL KL L N K + + S++ N++ +
Sbjct: 303 P--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDV-----SSLANLTNIN 355
Query: 122 ILDLSQNKLSGEIP 135
L N++S P
Sbjct: 356 WLSAGHNQISDLTP 369
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 293 EIMGKSTYGTVYKATLEDGSQ-VAVKRLREKITKGQREFESEVSLLGKIRHP------NL 345
+++GK +G V KA Q VA+K +R + + R+ E+ +L +R N+
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 346 LALRAYYLGPKGEKLLVFDYMPHGSLATF-LHARGPETPIDWPTRMKIIKGMTRGLLHLH 404
+ + + + + F+ + S+ + L + P K + + L LH
Sbjct: 162 IHMLENFTF-RNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 405 SNENIIHGNLTSSNVLLDDS--TNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK 462
N IIH +L N+LL + K+ DFG S YRAPE+
Sbjct: 218 KNR-IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYXXIQSRFYRAPEVIL 272
Query: 463 LKKANTKTDVYSLGVTILELLTGKS--PGE 490
+ D++SLG + ELLTG PGE
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 21 LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80
LS L ++ +S NKI ++ L L+ L+ N + +FS L+SL LTLE
Sbjct: 103 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162
Query: 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQ 127
NL ++L LH L VL L+ I+ + + L +L++S
Sbjct: 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
FL L YN +S + L +L LQEI L +++ V P L+ LR+L+ S N +
Sbjct: 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTL 311
Query: 62 LPASFSNLSSLVSLTLESNNL 82
+ F ++ +L +L L+SN L
Sbjct: 312 EESVFHSVGNLETLILDSNPL 332
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 22 SELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81
+E + + L N+I + + L L+ + N ++ P +F+NL +L +L L SN
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91
Query: 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130
L L L NL+ L++ N+I + ++ L L++ N L
Sbjct: 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%)
Query: 24 LQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLD 83
L +S++H ++ V + L LR L+ SYN I+ + L L + L L
Sbjct: 226 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA 285
Query: 84 DQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGE 133
+ L+ L VLN+ NQ++ S ++ L L L N L+ +
Sbjct: 286 VVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFS-YNAINGS 61
L L+ NL+ +L L L + L H I+ + RL RL++L+ S + ++
Sbjct: 157 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 216
Query: 62 LPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQIS 107
P L +L SL++ NL ++ L L LNL N IS
Sbjct: 217 TPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS 261
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L+ L+ + +S NK+S + S L +L+ L L + N I+ P L++L L+L
Sbjct: 168 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSL 223
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135
N L D + +L L NL+ L+L NQIS P + ++ LT L L N++S P
Sbjct: 224 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 277
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L++L +I +++N+I+ + P L L+ L L N I P NL++L L L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 136
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLS 131
SN + D + +L L +L LN NQ++ P + N++TL LD+S NK+S
Sbjct: 137 SSNTISD--ISALSGLTSLQQLNFG-NQVTDLKP--LANLTTLERLDISSNKVS 185
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N +S P L L++L E+ L N+IS + P L L+ L L+ + N +
Sbjct: 243 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 298
Query: 63 PASFSNLSSLVSLTLESNNLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P SNL +L LTL NN+ D + SL KL L N K + + S++ N++ +
Sbjct: 299 P--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDV-----SSLANLTNIN 351
Query: 122 ILDLSQNKLSGEIP 135
L N++S P
Sbjct: 352 WLSAGHNQISDLTP 365
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L+ L+ + +S NK+S + S L +L+ L L + N I+ P L++L L+L
Sbjct: 168 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSL 223
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135
N L D + +L L NL+ L+L NQIS P + ++ LT L L N++S P
Sbjct: 224 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 277
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L L++L +I +++N+I+ + P L L+ L L N I P NL++L L L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 136
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLS 131
SN + D + +L L +L LN NQ++ P + N++TL LD+S NK+S
Sbjct: 137 SSNTISD--ISALSGLTSLQQLNFG-NQVTDLKP--LANLTTLERLDISSNKVS 185
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N +S P L L++L E+ L N+IS + P L L+ L L+ + N +
Sbjct: 243 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 298
Query: 63 PASFSNLSSLVSLTLESNNLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P SNL +L LTL NN+ D + SL KL L N K + + S++ N++ +
Sbjct: 299 P--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-----SSLANLTNIN 351
Query: 122 ILDLSQNKLSGEIP 135
L N++S P
Sbjct: 352 WLSAGHNQISDLTP 365
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 21 LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLP-ASFSNLSSLVSLTLES 79
L ++ ++L NK+ + S L L+ L L + N + SLP F L++L L L
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVE 118
Query: 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130
N L DKL NL+ LNL NQ+ ++ LT LDLS N+L
Sbjct: 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 54/135 (40%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+L L N L KL+ L+E+ L N++ + +L+ L L+ ++N +
Sbjct: 89 YLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSL 148
Query: 62 LPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
F L++L L L N L DKL L L L +NQ+ +++L
Sbjct: 149 PKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 208
Query: 122 ILDLSQNKLSGEIPA 136
+ L N P
Sbjct: 209 YIWLHDNPWDCTCPG 223
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+LAL N L ++L +L+ L + L+ N++ + +L+ L+ L N +
Sbjct: 67 YLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSL 124
Query: 62 LPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
F L++L L L N L DKL NL+ L+L NQ+ ++ L
Sbjct: 125 PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLK 184
Query: 122 ILDLSQNKL 130
L L QN+L
Sbjct: 185 DLRLYQNQL 193
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 128
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G P + +LHS ++I
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 184
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 240
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 241 DWWALGVLIYEMAAGYPP 258
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+++D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIIISKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 102
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G P + +LHS ++I
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYLHS-LDLI 158
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 214
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 215 DWWALGVLIYEMAAGYPP 232
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
L LS LQ + L N+I+ + P L L+ L+ L ++ P +NLS L +L
Sbjct: 125 LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGE 133
+ N + D + L L NL ++LK NQIS P + N S L I+ L+ ++ +
Sbjct: 181 DDNKISD--ISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L++ + M G L + + RG + + +I++ + + LHS+ NI H ++ N+
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSH-NIAHRDVKPENL 159
Query: 420 LL---DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L + K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 160 LYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY---YVAPEVLGPEKYDKSCDMWSLG 216
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 217 VIMYILLCGFPP 228
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L++ + M G L + + RG + + +I++ + + LHS+ NI H ++ N+
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSH-NIAHRDVKPENL 140
Query: 420 LL---DDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L + K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 141 LYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY---YVAPEVLGPEKYDKSCDMWSLG 197
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 198 VIMYILLCGFPP 209
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I ++ G P
Sbjct: 220 DWWALGVLIYQMAAGYPP 237
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 162
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 163 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSLG 220
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 221 VIMYILLCGYPP 232
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 154
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 155 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSLG 212
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 213 VIMYILLCGYPP 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 152
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 153 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 210
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 211 VIMYILLCGYPP 222
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L +N L S ELQ + LS +I + LS L L + N I
Sbjct: 57 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 116
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI-SGHIPSTIGNISTLT 121
+FS LSSL L NL + L L LN+ N I S +P N++ L
Sbjct: 117 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 176
Query: 122 ILDLSQNKL 130
LDLS NK+
Sbjct: 177 HLDLSSNKI 185
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
FL L L P + LS LQ +++SHN + L+ L++LD+S N I S
Sbjct: 498 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 557
Query: 62 LPASFSNL-SSLVSLTLESNNL 82
+ SSL L L N+
Sbjct: 558 KKQELQHFPSSLAFLNLTQNDF 579
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 21 LSELQEISLSHNKIS-GVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
LS L+ + ++ N +P L L LD S + P +F++LSSL L +
Sbjct: 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527
Query: 80 NNLDDQILDSL--DKLHNLSVLNLKRNQISGHIPSTIGNI-STLTILDLSQNKLS 131
NN LD+ L++L VL+ N I + + S+L L+L+QN +
Sbjct: 528 NNFFS--LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVS 74
+ LS LQ++ ++ + +G L L+ L+ ++N I LP FSNL++L
Sbjct: 118 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 177
Query: 75 LTLESNNLDDQILDSLDKLHNL 96
L L SN + L LH +
Sbjct: 178 LDLSSNKIQSIYCTDLRVLHQM 199
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 192
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 193 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 250
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 251 VIMYILLCGYPP 262
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVL 420
LVF+ M GS+ + +H R ++ +++ + L LH N+ I H +L N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLH-NKGIAHRDLKPENIL 143
Query: 421 LDDSTNA---KISDFGLSRLMXXXXXXXXXXXXXXLG------YRAPEL-----SKLKKA 466
+ KI DFGL + L Y APE+ +
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 467 NTKTDVYSLGVTILELLTGKSP 488
+ + D++SLGV + LL+G P
Sbjct: 204 DKRCDLWSLGVILYILLSGYPP 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 153
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 154 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 211
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 212 VIMYILLCGYPP 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 148
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 149 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 206
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 207 VIMYILLCGYPP 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 146
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 147 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 204
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 205 VIMYILLCGYPP 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 146
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 147 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLG 204
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 205 VIMYILLCGYPP 216
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 198
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 199 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 256
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 257 VIMYILLCGYPP 268
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 147
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 148 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 205
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 206 VIMYILLCGYPP 217
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419
L+V + + G L + + RG + + +I+K + + +LHS NI H ++ N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI-NIAHRDVKPENL 148
Query: 420 LLDDST-NA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKTDVYSLG 476
L NA K++DFG ++ Y APE+ +K + D++SLG
Sbjct: 149 LYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 206
Query: 477 VTILELLTGKSP 488
V + LL G P
Sbjct: 207 VIMYILLCGYPP 218
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGR-LSRLRILDFSYNAING 60
++ L N+++ S +L +LQ + + V+ ++ R LS L IL YN
Sbjct: 34 YVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQIL--DSLDKLHNLSVLNLKRNQISGHIPSTIG-NI 117
+F+ L++L LTL NLD +L + L +L +L L+ N I P++ N+
Sbjct: 94 LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNM 153
Query: 118 STLTILDLSQNKL 130
+LDL+ NK+
Sbjct: 154 RRFHVLDLTFNKV 166
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L +N L S ELQ + LS +I + LS L L + N I
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI-SGHIPSTIGNISTLT 121
+FS LSSL L NL + L L LN+ N I S +P N++ L
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 122 ILDLSQNKL 130
LDLS NK+
Sbjct: 153 HLDLSSNKI 161
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
FL L L P + LS LQ +++SHN + L+ L++LD+S N I S
Sbjct: 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 533
Query: 62 LPASFSNL-SSLVSLTLESNNL 82
+ SSL L L N+
Sbjct: 534 KKQELQHFPSSLAFLNLTQNDF 555
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 21 LSELQEISLSHNKIS-GVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
LS L+ + ++ N +P L L LD S + P +F++LSSL L +
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 503
Query: 80 NNLDDQILDSL--DKLHNLSVLNLKRNQISGHIPSTIGNI-STLTILDLSQNKLS 131
NN LD+ L++L VL+ N I + + S+L L+L+QN +
Sbjct: 504 NNFFS--LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 21 LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING-SLPASFSNLSSLVSLTLES 79
LS LQ++ ++ + +G L L+ L+ ++N I LP FSNL++L L L S
Sbjct: 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158
Query: 80 NNLDDQILDSLDKLHNL 96
N + L LH +
Sbjct: 159 NKIQSIYCTDLRVLHQM 175
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGR-LSRLRILDFSYNAING 60
++ L N+++ S +L +LQ + + V+ ++ R LS L IL YN
Sbjct: 34 YVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93
Query: 61 SLPASFSNLSSLVSLTLESNNLDDQIL--DSLDKLHNLSVLNLKRNQISGHIPSTIG-NI 117
+F+ L++L LTL NLD +L + L +L +L L+ N I P++ N+
Sbjct: 94 LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNM 153
Query: 118 STLTILDLSQNKL 130
+LDL+ NK+
Sbjct: 154 RRFHVLDLTFNKV 166
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N ++ + L+ L +++LS N + + L +L +LD SYN I
Sbjct: 304 LTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALG 363
Query: 63 PASFSNLSSLVSLTLESNNLD---DQILDSLDKLHNL 96
SF L +L L L++N L D I D L L +
Sbjct: 364 DQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKI 400
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 46 SRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQ 105
S ++ D S + I L + FS+ + L LTL N ++ ++ L +L LNL +N
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNF 334
Query: 106 ISGHIPSTIGNISTLTILDLSQNKL 130
+ N+ L +LDLS N +
Sbjct: 335 LGSIDSRMFENLDKLEVLDLSYNHI 359
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L+ N L KL++L ++SLS N+I + +L++L IL N + SL
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SL 91
Query: 63 P-ASFSNLSSLVSLTLESNNLD---DQILDSLDKLHNL 96
P F L+ L L L++N L D I D L L +
Sbjct: 92 PNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI 129
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%)
Query: 70 SSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNK 129
SS L LESN L DKL L+ L+L +NQI ++ LTIL L +NK
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87
Query: 130 L 130
L
Sbjct: 88 L 88
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 6/122 (4%)
Query: 14 IPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLV 73
IP+S +L L NK+ + +L++L L S N I F L+ L
Sbjct: 26 IPSSATRLE------LESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLT 79
Query: 74 SLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGE 133
L L N L DKL L L L NQ+ +++L + L N
Sbjct: 80 ILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139
Query: 134 IP 135
P
Sbjct: 140 CP 141
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + Y AP + K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPAIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 21 LSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80
L +L+ ++L++NKI+ + L L++L+ SYN + ++F L + + L+ N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 81 N---LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130
+ + DQ L+KL L+L+ N + +TI I ++ + LS NKL
Sbjct: 349 HIAIIQDQTFKFLEKLQ---TLDLRDNAL-----TTIHFIPSIPDIFLSGNKL 393
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 22 SELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81
S ++ + LSH + + L L++L+ +YN IN +F L +L L L N
Sbjct: 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNL 325
Query: 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLS 131
L + + L ++ ++L++N I+ T + L LDL N L+
Sbjct: 326 LGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT 375
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L YN ++ + L LQ ++LS+N + + S+ L ++ +D N I
Sbjct: 295 LNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354
Query: 63 PASFSNLSSLVSLTLESNNLDD--------QILDSLDKLHNLSVLNLKRNQI-------- 106
+F L L +L L N L I S +KL L +NL N I
Sbjct: 355 DQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLE 414
Query: 107 SGHIPSTIGNISTLTILDLSQNKLS 131
+ I + + L IL L+QN+ S
Sbjct: 415 NLDILYFLLRVPHLQILILNQNRFS 439
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREFE---SEVSLLGKIRHPNLLALRA 350
+G ++G V E G+ A+K L ++ ++ E +E +L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE- 107
Query: 351 YYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENII 410
+ +V +Y+ G + + L G + P + +LHS ++I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYLHS-LDLI 163
Query: 411 HGNLTSSNVLLDDSTNAKISDFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKKANTKT 470
+ +L N+L+D +++DFG ++ + APE+ K N
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEAL----APEIILSKGYNKAV 219
Query: 471 DVYSLGVTILELLTGKSP 488
D ++LGV I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREF----ESEVSLLGKIRHPN----- 344
+G + TV+ A + + + VA+K I +G + + E E+ LL ++ +
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMK-----IVRGDKVYTEAAEDEIKLLQRVNDADNTKED 81
Query: 345 ------LLALRAYY--LGPKG-EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG 395
+L L ++ GP G ++VF+ + LA P+ + +I K
Sbjct: 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK--QISKQ 139
Query: 396 MTRGLLHLHSNENIIHGNLTSSNVLLD--DS----TNAKISDFGLSRLMXXXXXXXXXXX 449
+ GL ++H IIH ++ NVL++ DS KI+D G +
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNG 494
YR+PE+ D++S I EL+TG EP G
Sbjct: 200 E----YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 240
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+L L+ N+L +L+ L ++ L NK+ + +L+ L L+ S N + S
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-S 90
Query: 62 LP-ASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTL 120
LP F L+ L L L +N L DKL L L L +NQ+ +++L
Sbjct: 91 LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150
Query: 121 TILDLSQNKLSGEIPA 136
+ L N P
Sbjct: 151 QYIWLHDNPWDCTCPG 166
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
Query: 12 GRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLP-ASFSNLS 70
GR G ++ + L N + + L+ L L N + SLP F+ L+
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLT 76
Query: 71 SLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130
SL L L +N L DKL L L L NQ+ ++ L L L QN+L
Sbjct: 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+L L NL IP +L L +L E+ LS N +S + P L L+ L + I
Sbjct: 189 YLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI 246
Query: 62 LPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRN 104
+F NL SLV + L NNL D LH+L ++L N
Sbjct: 247 ERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 295 MGKSTYGTVYKAT-LEDGSQVAVKRLREKITKGQREF----ESEVSLLGKIRHPN----- 344
+G + TV+ A + + + VA+K I +G + + E E+ LL ++ +
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMK-----IVRGDKVYTEAAEDEIKLLQRVNDADNTKED 81
Query: 345 ------LLALRAYY--LGPKG-EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKG 395
+L L ++ GP G ++VF+ + LA P+ + +I K
Sbjct: 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK--QISKQ 139
Query: 396 MTRGLLHLHSNENIIHGNLTSSNVLLD--DS----TNAKISDFGLSRLMXXXXXXXXXXX 449
+ GL ++H IIH ++ NVL++ DS KI+D G +
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 450 XXXLGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNG 494
YR+PE+ D++S I EL+TG EP G
Sbjct: 200 E----YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 240
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 1/154 (0%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHN-KISGVMPSDLGRLSRLRILDFSYNAINGS 61
L L N L+G A+ L+ L+++ LS N ++ V P+ L L L +
Sbjct: 60 LWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQEL 119
Query: 62 LPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT 121
P F L++L L L+ NNL ++ L NL+ L L N+I + +L
Sbjct: 120 GPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLD 179
Query: 122 ILDLSQNKLSGEIPAXXXXXXXXXXXXXXYNNLS 155
L L QN ++ P NNLS
Sbjct: 180 RLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 25 QEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDD 84
Q I L N+IS V + L IL NA+ G A+F+ L+ L L L S+N
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDL-SDNAQL 92
Query: 85 QILD--SLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG 132
+++D + L +L L+L R + P ++ L L L N L
Sbjct: 93 RVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQA 142
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+L LQ NNL + L L + L N+I V L L L N +
Sbjct: 132 YLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARV 191
Query: 62 LPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRN 104
P +F +L L++L L +NNL + L L +L L L N
Sbjct: 192 HPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 14 IPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLV 73
IP+ L + ++ + LS+N+I+ + SDL R L+ L + N IN SFS+L SL
Sbjct: 46 IPSGLTE--AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103
Query: 74 SLTLESNNLDDQILDSLDKLHNLSVLNLKRN 104
L L N L + L +L+ LNL N
Sbjct: 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGN 134
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N ++ + L + LQ + L+ N I+ + L L LD SYN ++
Sbjct: 57 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116
Query: 63 PASFSNLSSLVSLTLESN 80
+ F LSSL L L N
Sbjct: 117 SSWFKPLSSLTFLNLLGN 134
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+L + L+G IP L + L E+ L HNKI + DL R S+L L +N I
Sbjct: 176 YLRISEAKLTG-IPKDLPE--TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI 232
Query: 62 LPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQIS 107
S S L +L L L++N L ++ L L L V+ L N I+
Sbjct: 233 ENGSLSFLPTLRELHLDNNKL-SRVPAGLPDLKLLQVVYLHTNNIT 277
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF----ESEVSLLGKIRHPN----- 344
++GK ++G V KA +V + + KI K ++ F + EV LL + +
Sbjct: 61 LIGKGSFGQVVKAY----DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 116
Query: 345 -LLALRAYYLGPKGEKLLVFDYMPHG--SLATFLHARGPETPIDWPTRMKIIKGMTRGLL 401
++ L+ +++ + LVF+ + + L + RG + TR K + M LL
Sbjct: 117 YIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNL---TR-KFAQQMCTALL 171
Query: 402 HLHSNE-NIIHGNLTSSNVLLDDSTNA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAP 458
L + E +IIH +L N+LL + + KI DFG S + YR+P
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF----YRSP 227
Query: 459 ELSKLKKANTKTDVYSLGVTILELLTGKSPGEPL 492
E+ + D++SLG ++E+ T GEPL
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEMHT----GEPL 257
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 14 IPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLV 73
IP+ L + ++ + LS+N+I+ + SDL R L+ L + N IN SFS+L SL
Sbjct: 20 IPSGLTE--AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 77
Query: 74 SLTLESNNLDDQILDSLDKLHNLSVLNLKRN 104
L L N L + L +L+ LNL N
Sbjct: 78 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGN 108
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSL 62
L L N ++ + L + LQ + L+ N I+ + L L LD SYN ++
Sbjct: 31 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 90
Query: 63 PASFSNLSSLVSLTLESN 80
+ F LSSL L L N
Sbjct: 91 SSWFKPLSSLTFLNLLGN 108
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTL 77
+ + L + + +NKI+ + P L LS+L L+ N I S + +L+ L L +
Sbjct: 217 VANXTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI--SDINAVKDLTKLKXLNV 272
Query: 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLS 131
SN + D + L+ L L+ L L NQ+ IG ++ LT L LSQN ++
Sbjct: 273 GSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHIT 324
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREF----ESEVSLLGKIRHPN----- 344
++GK ++G V KA +V + + KI K ++ F + EV LL + +
Sbjct: 42 LIGKGSFGQVVKAY----DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 97
Query: 345 -LLALRAYYLGPKGEKLLVFDYMPHG--SLATFLHARGPETPIDWPTRMKIIKGMTRGLL 401
++ L+ +++ + LVF+ + + L + RG + TR K + M LL
Sbjct: 98 YIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNL---TR-KFAQQMCTALL 152
Query: 402 HLHSNE-NIIHGNLTSSNVLLDDSTNA--KISDFGLSRLMXXXXXXXXXXXXXXLGYRAP 458
L + E +IIH +L N+LL + + KI DFG S + YR+P
Sbjct: 153 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF----YRSP 208
Query: 459 ELSKLKKANTKTDVYSLGVTILELLTGKSPGEPL 492
E+ + D++SLG ++E+ T GEPL
Sbjct: 209 EVLLGMPYDLAIDMWSLGCILVEMHT----GEPL 238
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 22 SELQEISLSHNKISGVMPSD-LG-RLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
+ ++ +SLS++++S + LG + + L +LD SYN +N SF+ L L LE
Sbjct: 232 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 291
Query: 80 NNLDDQILDSLDKLHNLSVLNLKR 103
NN+ SL L N+ LNLKR
Sbjct: 292 NNIQHLFSHSLHGLFNVRYLNLKR 315
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 30 SHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDS 89
SH K++ V P DL + + +L+ ++N + A+F+ S L SL + N + +
Sbjct: 22 SHLKLTQV-PDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPEL 78
Query: 90 LDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130
KL L VLNL+ N++S T + LT L L N +
Sbjct: 79 CQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSI 119
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 3 LALQYNNLS--------GRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFS 54
L LQ+NNL+ G L LS L ++L N + L L+I+D
Sbjct: 519 LDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 578
Query: 55 YNAINGSLPAS-FSNLSSLVSLTLESN 80
N +N +LPAS F+N SL SL L+ N
Sbjct: 579 LNNLN-TLPASVFNNQVSLKSLNLQKN 604
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 37/169 (21%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILD----FSYNAI 58
L L YNNL+ S L +L+ L +N I + L L +R L+ F+ +I
Sbjct: 263 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 322
Query: 59 N-GSLPA----SFSNLSSLVSLTLESNNLD------------------DQILDSLDKLHN 95
+ SLP SF L L L +E N++ SL L N
Sbjct: 323 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTN 382
Query: 96 ----------LSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEI 134
L +LNL +N+IS + L +LDL N++ E+
Sbjct: 383 ETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 431
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 15 PASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAI-------NGSLPASF- 66
P+ L L + LS+N I+ + L L +L ILD +N + N P F
Sbjct: 483 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFL 542
Query: 67 SNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLS 126
LS L L LESN D+ ++ L L +++L N ++ S N +L L+L
Sbjct: 543 KGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQ 602
Query: 127 QNKLSG 132
+N ++
Sbjct: 603 KNLITS 608
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 22 SELQEISLSHNKISGVMPSD-LG-RLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
+ ++ +SLS++++S + LG + + L +LD SYN +N SF+ L L LE
Sbjct: 227 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 286
Query: 80 NNLDDQILDSLDKLHNLSVLNLKR 103
NN+ SL L N+ LNLKR
Sbjct: 287 NNIQHLFSHSLHGLFNVRYLNLKR 310
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 30 SHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDS 89
SH K++ V P DL + + +L+ ++N + A+F+ S L SL + N + +
Sbjct: 17 SHLKLTQV-PDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPEL 73
Query: 90 LDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130
KL L VLNL+ N++S T + LT L L N +
Sbjct: 74 CQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSI 114
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 3 LALQYNNLS--------GRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFS 54
L LQ+NNL+ G L LS L ++L N + L L+I+D
Sbjct: 514 LDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 573
Query: 55 YNAINGSLPAS-FSNLSSLVSLTLESN 80
N +N +LPAS F+N SL SL L+ N
Sbjct: 574 LNNLN-TLPASVFNNQVSLKSLNLQKN 599
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 37/169 (21%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILD----FSYNAI 58
L L YNNL+ S L +L+ L +N I + L L +R L+ F+ +I
Sbjct: 258 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 317
Query: 59 N-GSLPA----SFSNLSSLVSLTLESNNLD------------------DQILDSLDKLHN 95
+ SLP SF L L L +E N++ SL L N
Sbjct: 318 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTN 377
Query: 96 ----------LSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEI 134
L +LNL +N+IS + L +LDL N++ E+
Sbjct: 378 ETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 426
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 15 PASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAI-------NGSLPASF- 66
P+ L L + LS+N I+ + L L +L ILD +N + N P F
Sbjct: 478 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFL 537
Query: 67 SNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLS 126
LS L L LESN D+ ++ L L +++L N ++ S N +L L+L
Sbjct: 538 KGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQ 597
Query: 127 QNKLSG 132
+N ++
Sbjct: 598 KNLITS 603
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 22 SELQEISLSHNKISGVMPSD-LG-RLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79
+ ++ +SLS++++S + LG + + L +LD SYN +N SF+ L L LE
Sbjct: 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 281
Query: 80 NNLDDQILDSLDKLHNLSVLNLKR 103
NN+ SL L N+ LNLKR
Sbjct: 282 NNIQHLFSHSLHGLFNVRYLNLKR 305
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 30 SHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDS 89
SH K++ V P DL + + +L+ ++N + A+F+ S L SL + N + +
Sbjct: 12 SHLKLTQV-PDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPEL 68
Query: 90 LDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130
KL L VLNL+ N++S T + LT L L N +
Sbjct: 69 CQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSI 109
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 3 LALQYNNLS--------GRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFS 54
L LQ+NNL+ G L LS L ++L N + L L+I+D
Sbjct: 509 LDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 568
Query: 55 YNAINGSLPAS-FSNLSSLVSLTLESN 80
N +N +LPAS F+N SL SL L+ N
Sbjct: 569 LNNLN-TLPASVFNNQVSLKSLNLQKN 594
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 37/169 (21%)
Query: 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILD----FSYNAI 58
L L YNNL+ S L +L+ L +N I + L L +R L+ F+ +I
Sbjct: 253 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 312
Query: 59 N-GSLPA----SFSNLSSLVSLTLESNNLD------------------DQILDSLDKLHN 95
+ SLP SF L L L +E N++ SL L N
Sbjct: 313 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTN 372
Query: 96 ----------LSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEI 134
L +LNL +N+IS + L +LDL N++ E+
Sbjct: 373 ETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 15 PASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAI-------NGSLPASF- 66
P+ L L + LS+N I+ + L L +L ILD +N + N P F
Sbjct: 473 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFL 532
Query: 67 SNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLS 126
LS L L LESN D+ ++ L L +++L N ++ S N +L L+L
Sbjct: 533 KGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQ 592
Query: 127 QNKLSG 132
+N ++
Sbjct: 593 KNLITS 598
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 294 IMGKSTYGTVYKATLE-DGSQVAVK---RLREKITKGQREFESEVSLLGKIRHPNLLALR 349
++G +YG V +A + + VA+K R+ E + +R E+++L ++ H +++ +
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRLNHDHVVKVL 118
Query: 350 AYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKI---IKGMTRGLLHLHSN 406
+ EK + + + F + TP+ + T + I + + G+ ++HS
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDF--KKLFRTPV-YLTELHIKTLLYNLLVGVKYVHS- 174
Query: 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLM--------------------------XX 440
I+H +L +N L++ + K+ DFGL+R +
Sbjct: 175 AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTK 234
Query: 441 XXXXXXXXXXXXLGYRAPELSKLKKANTKT-DVYSLGVTILELL 483
YRAPEL L++ T+ DV+S+G ELL
Sbjct: 235 NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 14 IPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLV 73
+P L L I LS+N+IS + +++L L SYN + P +F L SL
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 74 SLTLESNNL 82
L+L N++
Sbjct: 106 LLSLHGNDI 114
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS 61
+ L N +S S +++L + LS+N++ + P L LR+L N I+
Sbjct: 58 LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVV 117
Query: 62 LPASFSNLSSLVSLTLESNNL 82
+F++LS+L L + +N L
Sbjct: 118 PEGAFNDLSALSHLAIGANPL 138
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,828,343
Number of Sequences: 62578
Number of extensions: 504072
Number of successful extensions: 3365
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 306
Number of HSP's that attempted gapping in prelim test: 1180
Number of HSP's gapped (non-prelim): 1308
length of query: 580
length of database: 14,973,337
effective HSP length: 104
effective length of query: 476
effective length of database: 8,465,225
effective search space: 4029447100
effective search space used: 4029447100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.4 bits)