Query 008031
Match_columns 580
No_of_seqs 462 out of 4663
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 16:28:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 1.4E-56 4.8E-61 446.2 18.8 258 290-564 44-321 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-56 4.9E-61 440.0 16.0 259 289-564 15-291 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 7.9E-56 2.7E-60 436.7 16.9 254 290-560 29-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 5.5E-55 1.9E-59 428.6 20.3 257 290-563 39-301 (307)
5 4fih_A Serine/threonine-protei 100.0 1.9E-54 6.6E-59 429.9 17.0 248 289-556 76-324 (346)
6 4g3f_A NF-kappa-beta-inducing 100.0 4.4E-53 1.5E-57 419.0 22.0 252 289-563 60-317 (336)
7 4b9d_A Serine/threonine-protei 100.0 3.7E-54 1.3E-58 428.5 14.2 249 289-556 26-277 (350)
8 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-53 4.3E-58 417.7 14.1 246 289-555 34-284 (311)
9 3fpq_A Serine/threonine-protei 100.0 1.5E-52 5.2E-57 408.3 21.5 245 291-556 30-283 (290)
10 4ase_A Vascular endothelial gr 100.0 2.3E-53 7.9E-58 426.4 15.6 261 288-563 65-348 (353)
11 4fie_A Serine/threonine-protei 100.0 3.9E-53 1.3E-57 430.9 17.2 248 289-556 153-401 (423)
12 3hmm_A TGF-beta receptor type- 100.0 6.9E-53 2.4E-57 416.8 17.1 264 290-564 6-299 (303)
13 3hyh_A Carbon catabolite-derep 100.0 1.6E-52 5.4E-57 404.5 17.7 245 289-557 15-264 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-52 5.5E-57 410.0 11.8 246 289-556 26-282 (304)
15 4g31_A Eukaryotic translation 100.0 6.2E-51 2.1E-55 400.7 16.4 250 289-556 7-280 (299)
16 4b99_A Mitogen-activated prote 100.0 2.3E-48 7.8E-53 397.0 18.6 263 289-556 56-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 4.4E-47 1.5E-51 383.5 16.4 195 289-493 23-251 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 7.6E-47 2.6E-51 404.7 18.7 250 289-556 159-411 (573)
19 3v5w_A G-protein coupled recep 100.0 1.6E-46 5.5E-51 398.9 19.1 248 289-557 191-451 (689)
20 2qkw_B Protein kinase; three-h 100.0 1.9E-44 6.5E-49 361.7 23.0 270 289-562 41-315 (321)
21 3uim_A Brassinosteroid insensi 100.0 8.1E-45 2.8E-49 365.3 19.6 270 289-562 32-311 (326)
22 3zgw_A Maternal embryonic leuc 100.0 1.1E-44 3.8E-49 365.4 17.8 250 289-559 12-264 (347)
23 4hcu_A Tyrosine-protein kinase 100.0 6.5E-45 2.2E-49 355.6 15.3 256 288-563 11-267 (269)
24 3fxz_A Serine/threonine-protei 100.0 5.5E-44 1.9E-48 354.0 22.0 249 289-557 22-271 (297)
25 3p86_A Serine/threonine-protei 100.0 1.1E-44 3.9E-49 360.8 16.9 261 288-566 38-302 (309)
26 3s95_A LIMK-1, LIM domain kina 100.0 2.7E-44 9.2E-49 358.8 19.6 258 289-565 12-285 (310)
27 2psq_A Fibroblast growth facto 100.0 2.6E-44 8.8E-49 367.3 17.9 259 288-563 82-365 (370)
28 3fe3_A MAP/microtubule affinit 100.0 5.1E-44 1.8E-48 358.5 19.7 247 289-558 17-267 (328)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.6E-44 9E-49 351.1 17.1 257 288-564 9-266 (268)
30 3kul_A Ephrin type-A receptor 100.0 3.6E-44 1.2E-48 359.9 17.0 259 288-565 50-316 (325)
31 3gen_A Tyrosine-protein kinase 100.0 2.5E-44 8.6E-49 354.1 15.4 257 288-564 25-282 (283)
32 3soc_A Activin receptor type-2 100.0 2.5E-44 8.5E-49 360.8 15.3 267 289-563 26-319 (322)
33 4euu_A Serine/threonine-protei 100.0 7.3E-43 2.5E-47 349.8 23.7 270 289-561 11-308 (319)
34 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-43 7.7E-48 369.8 20.7 252 289-564 195-447 (450)
35 1qcf_A Haematopoetic cell kina 100.0 6.7E-44 2.3E-48 374.4 16.7 255 289-563 190-445 (454)
36 2yab_A Death-associated protei 100.0 3.4E-43 1.2E-47 356.7 20.9 249 289-556 14-273 (361)
37 2qol_A Ephrin receptor; recept 100.0 9.9E-44 3.4E-48 363.2 17.0 258 288-564 46-311 (373)
38 4eqm_A Protein kinase; transfe 100.0 2.7E-43 9.3E-48 348.5 19.4 262 289-566 13-279 (294)
39 1o6l_A RAC-beta serine/threoni 100.0 3.7E-43 1.3E-47 353.2 20.6 246 289-556 7-261 (337)
40 3cbl_A C-FES, proto-oncogene t 100.0 3.4E-44 1.2E-48 367.7 13.0 256 289-563 116-375 (377)
41 3l9p_A Anaplastic lymphoma kin 100.0 5.4E-44 1.8E-48 364.7 14.3 264 289-569 73-352 (367)
42 2c30_A Serine/threonine-protei 100.0 4.7E-43 1.6E-47 351.2 20.4 251 289-559 47-298 (321)
43 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-43 5.2E-48 375.2 16.7 257 289-564 222-480 (495)
44 3lb7_A RAF proto-oncogene seri 100.0 4.1E-43 1.4E-47 349.3 18.3 261 288-565 37-303 (307)
45 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2E-43 6.8E-48 370.4 16.7 256 289-564 186-442 (452)
46 3tt0_A Basic fibroblast growth 100.0 2.7E-43 9.1E-48 361.8 17.0 263 288-567 70-357 (382)
47 1tki_A Titin; serine kinase, m 100.0 5.2E-43 1.8E-47 350.6 18.6 251 289-558 7-260 (321)
48 3poz_A Epidermal growth factor 100.0 2.9E-43 9.8E-48 353.9 16.7 257 288-564 16-280 (327)
49 3qup_A Tyrosine-protein kinase 100.0 3.9E-43 1.3E-47 352.5 17.6 270 288-573 24-309 (323)
50 2nru_A Interleukin-1 receptor- 100.0 2.6E-42 9E-47 343.9 23.5 264 292-562 36-306 (307)
51 2y0a_A Death-associated protei 100.0 1.2E-42 4.2E-47 348.9 21.1 252 287-557 11-273 (326)
52 3t9t_A Tyrosine-protein kinase 100.0 2.9E-43 9.8E-48 343.4 15.8 255 289-563 10-265 (267)
53 3niz_A Rhodanese family protei 100.0 7.3E-43 2.5E-47 348.3 19.0 262 289-556 23-301 (311)
54 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.5E-43 8.6E-48 356.8 15.6 246 289-556 25-281 (353)
55 3kex_A Receptor tyrosine-prote 100.0 2.9E-43 9.9E-48 353.6 15.8 256 289-564 15-278 (325)
56 1mp8_A Focal adhesion kinase 1 100.0 3.9E-43 1.3E-47 345.2 16.0 257 288-564 16-278 (281)
57 3q4u_A Activin receptor type-1 100.0 1.5E-42 5.3E-47 344.5 20.2 258 289-560 10-300 (301)
58 1luf_A Muscle-specific tyrosin 100.0 5.2E-43 1.8E-47 354.7 16.7 260 289-565 49-338 (343)
59 3vhe_A Vascular endothelial gr 100.0 4.3E-43 1.5E-47 357.6 16.2 261 288-563 23-356 (359)
60 3ugc_A Tyrosine-protein kinase 100.0 1.7E-43 5.8E-48 350.4 12.7 263 288-564 11-293 (295)
61 2izr_A Casein kinase I isoform 100.0 1E-42 3.5E-47 350.5 18.3 259 289-563 11-282 (330)
62 3soa_A Calcium/calmodulin-depe 100.0 1.7E-42 5.8E-47 360.8 20.4 253 287-557 11-269 (444)
63 2bdw_A Hypothetical protein K1 100.0 1.1E-42 3.9E-47 353.9 18.6 251 287-556 29-285 (362)
64 1kob_A Twitchin; kinase, intra 100.0 1.3E-42 4.4E-47 355.7 18.8 251 289-557 53-306 (387)
65 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.3E-43 2.1E-47 351.2 15.5 246 289-558 11-261 (336)
66 3c1x_A Hepatocyte growth facto 100.0 9.3E-43 3.2E-47 355.6 16.8 259 289-565 91-358 (373)
67 1fot_A TPK1 delta, CAMP-depend 100.0 2.1E-42 7.1E-47 345.3 18.9 243 289-556 8-259 (318)
68 4fr4_A YANK1, serine/threonine 100.0 3.2E-42 1.1E-46 351.6 20.6 247 289-555 17-271 (384)
69 3v8s_A RHO-associated protein 100.0 6.4E-43 2.2E-47 359.9 15.6 251 289-557 71-331 (410)
70 1csn_A Casein kinase-1; phosph 100.0 4E-42 1.4E-46 341.0 20.5 265 289-568 12-289 (298)
71 1ob3_A PFPK5, cell division co 100.0 1.5E-42 5.1E-47 342.3 17.3 262 289-556 4-281 (288)
72 3lxl_A Tyrosine-protein kinase 100.0 1.5E-43 5E-48 356.2 10.1 273 288-574 24-315 (327)
73 2ivs_A Proto-oncogene tyrosine 100.0 1E-42 3.4E-47 348.0 16.1 259 288-563 24-312 (314)
74 3c0i_A Peripheral plasma membr 100.0 1.5E-42 5.2E-47 351.9 17.5 254 287-556 24-287 (351)
75 3kfa_A Tyrosine-protein kinase 100.0 9.9E-43 3.4E-47 343.6 15.6 259 288-565 14-274 (288)
76 2eva_A TAK1 kinase - TAB1 chim 100.0 2.9E-42 1E-46 343.3 19.1 254 289-565 10-266 (307)
77 4f0f_A Serine/threonine-protei 100.0 1E-41 3.5E-46 336.2 22.7 250 289-560 21-287 (287)
78 3tki_A Serine/threonine-protei 100.0 2.8E-42 9.5E-47 345.8 18.7 252 289-558 9-264 (323)
79 1xjd_A Protein kinase C, theta 100.0 7.3E-43 2.5E-47 352.0 14.5 246 289-556 19-270 (345)
80 2x4f_A Myosin light chain kina 100.0 2E-42 7E-47 353.3 18.0 247 292-556 94-343 (373)
81 3cc6_A Protein tyrosine kinase 100.0 1.3E-42 4.5E-47 341.5 15.7 256 289-564 14-275 (281)
82 2zv2_A Calcium/calmodulin-depe 100.0 1.6E-42 5.3E-47 344.0 16.4 248 289-556 15-293 (298)
83 3op5_A Serine/threonine-protei 100.0 1.7E-42 5.9E-47 353.6 17.2 268 289-566 37-333 (364)
84 3uc3_A Serine/threonine-protei 100.0 4.4E-42 1.5E-46 349.6 19.9 251 289-558 22-277 (361)
85 3f66_A Hepatocyte growth facto 100.0 5.2E-42 1.8E-46 340.2 19.9 258 288-563 26-292 (298)
86 3lzb_A Epidermal growth factor 100.0 2.3E-42 7.7E-47 347.2 17.2 256 289-564 17-280 (327)
87 3gni_B Strad alpha; kinase fol 100.0 2.7E-42 9.1E-47 355.6 18.1 271 288-561 26-341 (389)
88 1qpc_A LCK kinase; alpha beta 100.0 9.6E-43 3.3E-47 342.1 14.0 256 288-563 14-270 (279)
89 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.5E-42 1.2E-46 348.3 18.5 244 289-557 43-295 (350)
90 4dc2_A Protein kinase C IOTA t 100.0 7E-42 2.4E-46 350.2 20.9 250 289-556 54-319 (396)
91 2h8h_A Proto-oncogene tyrosine 100.0 7.1E-43 2.4E-47 373.4 14.0 255 289-563 269-524 (535)
92 1mqb_A Ephrin type-A receptor 100.0 5.1E-42 1.7E-46 345.6 19.0 257 289-564 46-311 (333)
93 4aw2_A Serine/threonine-protei 100.0 1.9E-42 6.5E-47 359.0 16.1 254 289-557 76-340 (437)
94 3dtc_A Mitogen-activated prote 100.0 2E-42 6.7E-47 338.3 15.3 248 289-560 9-271 (271)
95 3qd2_B Eukaryotic translation 100.0 3E-42 1E-46 347.3 17.1 251 288-556 7-326 (332)
96 3og7_A AKAP9-BRAF fusion prote 100.0 4E-42 1.4E-46 339.4 17.6 258 289-563 26-289 (289)
97 2i0e_A Protein kinase C-beta I 100.0 3.4E-42 1.2E-46 348.3 17.5 246 289-556 22-277 (353)
98 2h34_A Serine/threonine-protei 100.0 1E-41 3.4E-46 339.9 20.5 260 289-566 36-300 (309)
99 1rjb_A FL cytokine receptor; k 100.0 2.9E-42 9.8E-47 349.4 16.6 264 287-566 45-338 (344)
100 2pmi_A Negative RE, cyclin-dep 100.0 5.4E-42 1.9E-46 343.0 18.4 265 288-556 6-294 (317)
101 3kmu_A ILK, integrin-linked ki 100.0 6.4E-42 2.2E-46 334.6 18.4 251 289-562 12-270 (271)
102 3f3z_A Calcium/calmodulin-depe 100.0 8.5E-42 2.9E-46 334.9 19.2 250 288-557 10-263 (277)
103 4eut_A Serine/threonine-protei 100.0 6.3E-42 2.2E-46 353.2 19.0 273 289-564 11-311 (396)
104 4fvq_A Tyrosine-protein kinase 100.0 1.1E-42 3.9E-47 343.4 12.9 251 289-565 10-278 (289)
105 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-41 3.8E-46 337.5 19.8 268 289-570 11-288 (296)
106 3a62_A Ribosomal protein S6 ki 100.0 4.8E-42 1.6E-46 344.8 17.4 247 289-557 19-278 (327)
107 2pvf_A Fibroblast growth facto 100.0 3E-42 1E-46 347.6 16.0 262 287-565 35-321 (334)
108 4hgt_A Casein kinase I isoform 100.0 7.5E-42 2.5E-46 338.7 18.4 268 288-569 10-287 (296)
109 3a8x_A Protein kinase C IOTA t 100.0 1.7E-41 6E-46 342.6 21.2 250 289-556 11-276 (345)
110 1u59_A Tyrosine-protein kinase 100.0 5.1E-42 1.7E-46 338.4 16.9 259 293-571 16-281 (287)
111 3mdy_A Bone morphogenetic prot 100.0 5.8E-41 2E-45 338.8 24.4 264 287-564 37-333 (337)
112 2a2a_A Death-associated protei 100.0 2.3E-41 7.8E-46 339.3 21.2 251 287-556 12-273 (321)
113 1t46_A HOMO sapiens V-KIT hard 100.0 5.7E-42 2E-46 342.4 16.8 261 288-564 24-309 (313)
114 3o0g_A Cell division protein k 100.0 7.6E-42 2.6E-46 338.0 17.3 260 289-556 4-283 (292)
115 2ozo_A Tyrosine-protein kinase 100.0 1.1E-41 3.7E-46 369.4 20.1 251 294-564 343-600 (613)
116 2vd5_A DMPK protein; serine/th 100.0 3.9E-42 1.3E-46 354.2 15.8 253 289-557 63-329 (412)
117 3ork_A Serine/threonine protei 100.0 2.9E-42 9.9E-47 344.2 14.4 258 289-562 14-281 (311)
118 1byg_A CSK, protein (C-termina 100.0 2.5E-42 8.4E-47 339.0 13.7 253 288-564 22-275 (278)
119 2jii_A Serine/threonine-protei 100.0 3.5E-42 1.2E-46 349.7 15.0 271 289-573 44-347 (352)
120 3kn6_A Ribosomal protein S6 ki 100.0 1E-41 3.5E-46 342.0 18.1 248 292-557 16-272 (325)
121 2w4o_A Calcium/calmodulin-depe 100.0 7.3E-42 2.5E-46 346.4 17.1 248 289-556 55-306 (349)
122 3pls_A Macrophage-stimulating 100.0 9E-42 3.1E-46 338.5 17.4 260 287-564 21-289 (298)
123 2y94_A 5'-AMP-activated protei 100.0 7.9E-42 2.7E-46 358.0 17.8 246 289-557 18-268 (476)
124 2acx_A G protein-coupled recep 100.0 1.6E-41 5.5E-46 360.3 19.7 251 289-556 186-445 (576)
125 2ac3_A MAP kinase-interacting 100.0 3.4E-41 1.2E-45 337.3 21.0 252 292-557 18-297 (316)
126 3oz6_A Mitogen-activated prote 100.0 1.5E-41 5.2E-46 349.7 18.7 269 289-563 11-338 (388)
127 1p4o_A Insulin-like growth fac 100.0 4.8E-42 1.6E-46 344.4 14.5 261 288-565 26-302 (322)
128 3hko_A Calcium/calmodulin-depe 100.0 1E-41 3.4E-46 345.5 16.9 256 287-556 26-331 (345)
129 3ll6_A Cyclin G-associated kin 100.0 8E-42 2.7E-46 345.0 16.0 257 288-564 29-310 (337)
130 3g33_A Cell division protein k 100.0 1E-41 3.5E-46 339.7 16.5 264 289-557 11-298 (308)
131 4ejn_A RAC-alpha serine/threon 100.0 4.9E-42 1.7E-46 359.7 14.8 248 289-557 150-406 (446)
132 2eue_A Carbon catabolite derep 100.0 9.8E-42 3.3E-46 334.2 15.9 245 289-557 15-264 (275)
133 1nxk_A MAP kinase-activated pr 100.0 2E-41 6.8E-46 349.3 19.0 249 293-559 68-325 (400)
134 3kk8_A Calcium/calmodulin depe 100.0 4.9E-41 1.7E-45 330.8 21.0 261 289-568 8-274 (284)
135 3brb_A Proto-oncogene tyrosine 100.0 2.1E-41 7.3E-46 338.3 18.6 261 288-564 35-310 (313)
136 4fl3_A Tyrosine-protein kinase 100.0 1.1E-41 3.6E-46 370.4 17.6 249 293-562 375-631 (635)
137 3lxp_A Non-receptor tyrosine-p 100.0 2.5E-42 8.4E-47 345.7 11.7 260 290-565 34-313 (318)
138 3fdn_A Serine/threonine-protei 100.0 1.7E-41 5.8E-46 333.2 17.5 246 289-558 11-260 (279)
139 4e5w_A Tyrosine-protein kinase 100.0 2.5E-42 8.7E-47 343.1 11.5 259 289-561 23-301 (302)
140 3ttj_A Mitogen-activated prote 100.0 1.3E-41 4.4E-46 357.0 17.3 260 289-557 64-357 (464)
141 3gxj_A TGF-beta receptor type- 100.0 1.1E-42 3.8E-47 345.8 8.8 262 289-565 5-300 (303)
142 2buj_A Serine/threonine-protei 100.0 1.5E-41 5.2E-46 340.0 16.9 263 288-566 30-310 (317)
143 2xir_A Vascular endothelial gr 100.0 1.2E-41 4E-46 340.6 15.9 262 288-564 28-312 (316)
144 2v62_A Serine/threonine-protei 100.0 9.4E-42 3.2E-46 345.5 15.3 263 289-562 39-328 (345)
145 1vzo_A Ribosomal protein S6 ki 100.0 1.7E-41 6E-46 344.6 17.3 255 288-559 55-325 (355)
146 2qr7_A Ribosomal protein S6 ki 100.0 2.8E-41 9.5E-46 340.7 18.4 253 288-559 23-281 (342)
147 3is5_A Calcium-dependent prote 100.0 2.1E-41 7.2E-46 333.5 17.1 251 288-556 23-279 (285)
148 2yfx_A Tyrosine-protein kinase 100.0 9.2E-42 3.1E-46 343.1 14.9 263 288-567 31-309 (327)
149 2wqm_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 335.0 20.0 266 289-569 34-304 (310)
150 3llt_A Serine/threonine kinase 100.0 1E-41 3.5E-46 347.5 15.3 259 289-556 37-356 (360)
151 2r5t_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46 347.1 15.2 241 289-551 40-285 (373)
152 1u5q_A Serine/threonine protei 100.0 1.9E-41 6.7E-46 342.8 17.0 252 287-562 54-312 (348)
153 3bhy_A Death-associated protei 100.0 9.6E-41 3.3E-45 328.5 21.2 258 288-564 6-276 (283)
154 1b6c_B TGF-B superfamily recep 100.0 8.5E-41 2.9E-45 338.3 21.3 263 288-564 43-338 (342)
155 3cok_A Serine/threonine-protei 100.0 1.8E-41 6.2E-46 332.8 15.8 248 289-557 13-264 (278)
156 3g2f_A Bone morphogenetic prot 100.0 1.8E-41 6.2E-46 342.4 16.1 269 289-566 15-322 (336)
157 2jam_A Calcium/calmodulin-depe 100.0 3.7E-41 1.3E-45 335.1 18.0 250 288-557 10-263 (304)
158 1xbb_A Tyrosine-protein kinase 100.0 2.2E-41 7.5E-46 334.5 15.6 258 289-567 18-284 (291)
159 3rp9_A Mitogen-activated prote 100.0 2E-41 6.7E-46 356.6 16.1 191 289-484 55-279 (458)
160 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-40 4.4E-45 332.1 21.1 246 286-556 56-305 (311)
161 1fvr_A Tyrosine-protein kinase 100.0 2.2E-41 7.6E-46 340.3 15.7 258 289-565 27-303 (327)
162 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.5E-41 2.9E-45 354.0 20.9 252 289-556 187-449 (543)
163 2wtk_C Serine/threonine-protei 100.0 1.1E-40 3.8E-45 331.8 20.5 252 289-559 7-267 (305)
164 3dbq_A Dual specificity protei 100.0 6E-41 2.1E-45 339.3 18.7 251 289-559 11-277 (343)
165 3lm5_A Serine/threonine-protei 100.0 6E-41 2E-45 337.0 18.5 248 293-557 35-289 (327)
166 3dls_A PAS domain-containing s 100.0 2.2E-41 7.7E-46 340.8 15.2 242 287-557 24-276 (335)
167 2i1m_A Macrophage colony-stimu 100.0 1.3E-41 4.3E-46 343.0 13.3 260 289-564 48-328 (333)
168 1ua2_A CAK, cell division prot 100.0 5.8E-41 2E-45 339.9 18.1 266 288-559 11-295 (346)
169 3mwu_A Calmodulin-domain prote 100.0 9.3E-41 3.2E-45 354.0 20.1 251 287-557 22-278 (486)
170 3lij_A Calcium/calmodulin depe 100.0 8.2E-41 2.8E-45 354.9 19.7 249 288-556 38-292 (494)
171 3i6u_A CDS1, serine/threonine- 100.0 7.7E-41 2.6E-45 347.3 18.9 250 288-557 136-401 (419)
172 4agu_A Cyclin-dependent kinase 100.0 8.1E-41 2.8E-45 333.8 18.4 262 289-556 5-285 (311)
173 2zmd_A Dual specificity protei 100.0 1.3E-40 4.5E-45 342.2 20.1 250 289-558 58-323 (390)
174 2yex_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 325.8 19.5 252 288-557 8-263 (276)
175 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.2E-41 7.7E-46 340.4 13.9 261 289-556 36-319 (329)
176 3nyv_A Calmodulin-domain prote 100.0 5.1E-41 1.7E-45 356.0 17.3 251 288-558 27-284 (484)
177 3byv_A Rhoptry kinase; malaria 100.0 5.2E-42 1.8E-46 351.7 9.1 241 289-556 75-360 (377)
178 1t4h_A Serine/threonine-protei 100.0 4.1E-40 1.4E-44 325.2 22.4 247 289-556 28-283 (290)
179 3mtl_A Cell division protein k 100.0 3.3E-41 1.1E-45 338.4 14.7 261 289-558 4-284 (324)
180 2rku_A Serine/threonine-protei 100.0 6.6E-41 2.3E-45 331.6 16.6 248 289-558 17-268 (294)
181 2owb_A Serine/threonine-protei 100.0 1E-40 3.4E-45 336.5 18.0 247 289-557 43-293 (335)
182 3nsz_A CK II alpha, casein kin 100.0 8.7E-41 3E-45 336.5 17.3 258 287-556 36-320 (330)
183 2vgo_A Serine/threonine-protei 100.0 9.4E-41 3.2E-45 328.8 17.1 245 289-557 16-264 (284)
184 2j7t_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 331.0 18.0 250 289-556 21-276 (302)
185 3sv0_A Casein kinase I-like; t 100.0 1.5E-40 5E-45 349.0 19.5 260 289-562 9-278 (483)
186 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-40 3.6E-45 331.6 17.5 250 289-560 24-275 (303)
187 2clq_A Mitogen-activated prote 100.0 9.5E-41 3.2E-45 330.6 16.9 249 292-556 27-279 (295)
188 2y7j_A Phosphorylase B kinase 100.0 1.3E-40 4.5E-45 339.4 18.4 250 288-556 95-360 (365)
189 2w1i_A JAK2; chromosomal rearr 100.0 4.6E-41 1.6E-45 337.8 14.8 261 289-563 43-323 (326)
190 2w5a_A Serine/threonine-protei 100.0 1.7E-41 5.9E-46 333.1 11.2 256 289-561 8-273 (279)
191 2h6d_A 5'-AMP-activated protei 100.0 1.3E-40 4.4E-45 326.4 17.4 245 289-556 13-262 (276)
192 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1E-40 3.4E-45 340.8 17.3 251 289-564 67-341 (365)
193 3n9x_A Phosphotransferase; mal 100.0 3E-40 1E-44 344.3 21.2 196 289-489 28-252 (432)
194 2vwi_A Serine/threonine-protei 100.0 2.7E-41 9.3E-46 335.8 12.6 257 289-556 17-288 (303)
195 3mi9_A Cell division protein k 100.0 8.3E-41 2.8E-45 339.6 16.4 267 288-558 18-314 (351)
196 2a19_B Interferon-induced, dou 100.0 8.7E-41 3E-45 328.9 15.9 253 287-567 11-279 (284)
197 3q5i_A Protein kinase; CDPK, m 100.0 2.4E-40 8.1E-45 352.3 20.4 250 289-558 38-304 (504)
198 3eqc_A Dual specificity mitoge 100.0 4.8E-41 1.6E-45 342.6 14.3 263 289-558 35-327 (360)
199 1cm8_A Phosphorylated MAP kina 100.0 2E-40 6.8E-45 338.1 18.7 261 289-562 27-316 (367)
200 3qyz_A Mitogen-activated prote 100.0 2.1E-40 7.3E-45 338.1 18.6 260 289-557 29-315 (364)
201 4e7w_A Glycogen synthase kinas 100.0 6.4E-41 2.2E-45 345.1 14.2 269 289-564 42-332 (394)
202 3pfq_A PKC-B, PKC-beta, protei 100.0 1.4E-40 4.7E-45 364.0 17.1 246 289-556 343-598 (674)
203 4aaa_A Cyclin-dependent kinase 100.0 6.9E-41 2.3E-45 337.3 13.3 261 288-557 26-308 (331)
204 2j0j_A Focal adhesion kinase 1 100.0 1.1E-40 3.7E-45 363.8 15.9 257 287-563 390-652 (656)
205 1u46_A ACK-1, activated CDC42 100.0 4.2E-41 1.4E-45 332.4 11.5 259 288-565 19-287 (291)
206 3com_A Serine/threonine-protei 100.0 3.5E-40 1.2E-44 329.7 18.0 250 288-557 30-280 (314)
207 2r3i_A Cell division protein k 100.0 4.4E-40 1.5E-44 326.5 17.6 260 289-556 5-284 (299)
208 2xrw_A Mitogen-activated prote 100.0 2.6E-40 9E-45 338.1 16.1 261 289-558 27-321 (371)
209 1j1b_A Glycogen synthase kinas 100.0 1.1E-40 3.8E-45 346.2 13.3 262 288-557 55-338 (420)
210 1wak_A Serine/threonine-protei 100.0 5.4E-40 1.8E-44 339.4 18.3 260 289-556 39-392 (397)
211 3kvw_A DYRK2, dual specificity 100.0 1.7E-40 5.8E-45 345.6 14.5 261 289-558 99-411 (429)
212 3rgf_A Cyclin-dependent kinase 100.0 4.5E-40 1.5E-44 340.6 17.5 264 292-560 26-338 (405)
213 2pml_X PFPK7, Ser/Thr protein 100.0 2.3E-40 7.8E-45 336.0 14.9 259 289-556 33-323 (348)
214 2ycf_A Serine/threonine-protei 100.0 6.3E-40 2.2E-44 328.9 17.7 249 288-556 11-275 (322)
215 1phk_A Phosphorylase kinase; g 100.0 4.2E-40 1.4E-44 326.5 16.2 249 289-556 19-284 (298)
216 2fst_X Mitogen-activated prote 100.0 3.5E-40 1.2E-44 336.0 15.6 259 289-557 31-313 (367)
217 1x8b_A WEE1HU, WEE1-like prote 100.0 6.9E-40 2.4E-44 323.1 17.2 247 286-557 10-281 (289)
218 3eb0_A Putative uncharacterize 100.0 2.9E-40 1E-44 339.4 15.1 258 289-556 9-322 (383)
219 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.7E-40 5.7E-45 332.7 12.8 260 289-569 35-309 (319)
220 3q60_A ROP5B; pseudokinase, tr 100.0 1E-40 3.4E-45 341.5 10.8 252 289-556 64-353 (371)
221 3pg1_A Mitogen-activated prote 100.0 9.5E-40 3.3E-44 333.3 17.6 263 289-557 24-318 (362)
222 2x7f_A TRAF2 and NCK-interacti 100.0 7.3E-40 2.5E-44 329.1 16.2 250 289-556 26-287 (326)
223 2wei_A Calmodulin-domain prote 100.0 1.6E-39 5.5E-44 320.5 18.3 249 288-556 23-277 (287)
224 1blx_A Cyclin-dependent kinase 100.0 1.2E-39 4.1E-44 327.6 16.6 261 288-556 12-297 (326)
225 3fme_A Dual specificity mitoge 100.0 1.7E-39 5.7E-44 320.8 17.3 251 289-557 9-268 (290)
226 1z57_A Dual specificity protei 100.0 1.5E-39 5.1E-44 328.5 17.1 259 289-556 16-329 (339)
227 2i6l_A Mitogen-activated prote 100.0 1.2E-39 4E-44 326.6 15.7 263 289-557 13-307 (320)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-39 6.5E-44 329.9 17.3 260 289-557 13-307 (353)
229 2vx3_A Dual specificity tyrosi 100.0 3E-39 1E-43 331.8 18.7 260 289-556 56-373 (382)
230 3an0_A Dual specificity mitoge 100.0 1.8E-39 6.3E-44 328.2 16.9 252 289-557 53-312 (340)
231 4exu_A Mitogen-activated prote 100.0 1.8E-39 6E-44 332.0 16.7 258 289-557 44-325 (371)
232 3e3p_A Protein kinase, putativ 100.0 1.5E-39 5.3E-44 331.5 15.6 264 289-557 25-316 (360)
233 1zy4_A Serine/threonine-protei 100.0 7.9E-39 2.7E-43 317.9 19.5 252 288-557 7-285 (303)
234 3coi_A Mitogen-activated prote 100.0 3.3E-39 1.1E-43 328.0 16.8 258 289-557 26-307 (353)
235 2eu9_A Dual specificity protei 100.0 3E-39 1E-43 328.6 16.5 269 289-566 21-346 (355)
236 1q8y_A SR protein kinase; tran 100.0 4.2E-39 1.4E-43 329.9 17.0 262 288-557 20-335 (373)
237 3fhr_A MAP kinase-activated pr 100.0 3.2E-39 1.1E-43 325.5 15.0 250 292-558 34-290 (336)
238 3cek_A Dual specificity protei 100.0 1.5E-38 5.2E-43 317.6 18.3 251 289-559 30-296 (313)
239 3aln_A Dual specificity mitoge 100.0 3.3E-39 1.1E-43 324.4 13.4 254 289-557 24-287 (327)
240 2rio_A Serine/threonine-protei 100.0 2.8E-39 9.6E-44 337.1 13.1 249 291-556 19-296 (434)
241 3a99_A Proto-oncogene serine/t 100.0 9.2E-40 3.2E-44 327.3 7.2 239 289-557 45-295 (320)
242 3uqc_A Probable conserved tran 100.0 1.4E-38 4.7E-43 312.9 15.1 233 289-566 33-269 (286)
243 3p23_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 330.7 15.4 247 289-556 26-284 (432)
244 2dyl_A Dual specificity mitoge 100.0 5.6E-38 1.9E-42 314.2 18.5 251 288-556 26-284 (318)
245 3qa8_A MGC80376 protein; kinas 100.0 1.2E-38 4E-43 341.5 12.5 272 288-564 15-311 (676)
246 2iwi_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43 319.6 10.3 241 288-558 32-286 (312)
247 2pzi_A Probable serine/threoni 100.0 8.8E-38 3E-42 344.1 13.8 238 289-561 82-327 (681)
248 3m2w_A MAP kinase-activated pr 100.0 1E-36 3.6E-41 302.1 14.5 228 293-558 24-259 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 9.7E-37 3.3E-41 315.8 13.7 240 290-556 81-364 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.3E-36 7.7E-41 304.9 9.7 244 287-556 20-332 (336)
251 4azs_A Methyltransferase WBDD; 100.0 5.7E-30 2E-34 274.1 6.1 185 294-488 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 5.2E-27 1.8E-31 249.8 6.8 183 292-490 341-539 (540)
253 3rgz_A Protein brassinosteroid 99.9 9.4E-25 3.2E-29 243.9 15.2 189 2-191 494-753 (768)
254 3m19_A Variable lymphocyte rec 99.9 6.1E-23 2.1E-27 197.4 16.7 157 1-157 38-194 (251)
255 1ogq_A PGIP-2, polygalacturona 99.9 1.2E-23 4.3E-28 209.1 11.6 182 1-183 104-310 (313)
256 1zar_A RIO2 kinase; serine kin 99.9 4.1E-24 1.4E-28 208.6 6.3 141 291-462 94-252 (282)
257 2o6q_A Variable lymphocyte rec 99.9 7.7E-22 2.6E-26 191.9 18.1 162 1-162 40-201 (270)
258 1ozn_A Reticulon 4 receptor; N 99.9 1.1E-21 3.6E-26 192.6 15.9 161 2-162 36-197 (285)
259 3m19_A Variable lymphocyte rec 99.9 3E-21 1E-25 185.6 17.3 160 1-163 17-176 (251)
260 1p9a_G Platelet glycoprotein I 99.9 2.2E-21 7.4E-26 190.5 16.2 158 1-162 34-191 (290)
261 1ogq_A PGIP-2, polygalacturona 99.9 9E-22 3.1E-26 195.7 12.6 159 1-160 79-239 (313)
262 3rfs_A Internalin B, repeat mo 99.9 5.1E-21 1.8E-25 186.3 17.2 158 1-162 44-201 (272)
263 4fcg_A Uncharacterized protein 99.9 3.4E-21 1.2E-25 192.7 15.4 159 1-163 107-274 (328)
264 2v70_A SLIT-2, SLIT homolog 2 99.9 4.5E-21 1.6E-25 180.2 15.4 156 2-160 15-171 (220)
265 2v9t_B SLIT homolog 2 protein 99.9 3.9E-21 1.3E-25 180.6 14.8 155 2-159 15-169 (220)
266 3e6j_A Variable lymphocyte rec 99.8 1.7E-20 5.8E-25 177.5 17.1 154 2-159 23-176 (229)
267 1ozn_A Reticulon 4 receptor; N 99.8 8.6E-21 3E-25 186.1 15.2 162 1-162 59-221 (285)
268 2o6q_A Variable lymphocyte rec 99.8 1.8E-20 6.3E-25 182.1 17.4 159 1-159 64-222 (270)
269 4fcg_A Uncharacterized protein 99.8 9.5E-21 3.2E-25 189.5 15.7 158 1-163 84-250 (328)
270 3rfs_A Internalin B, repeat mo 99.8 2.6E-20 9E-25 181.2 17.8 158 1-160 66-223 (272)
271 2z66_A Variable lymphocyte rec 99.8 7.7E-21 2.6E-25 188.5 12.8 157 2-159 56-216 (306)
272 2o6s_A Variable lymphocyte rec 99.8 1.4E-20 4.7E-25 175.5 13.1 156 2-160 11-166 (208)
273 3rgz_A Protein brassinosteroid 99.8 1.3E-20 4.6E-25 210.3 15.3 161 2-162 398-558 (768)
274 3zyi_A Leucine-rich repeat-con 99.8 3.3E-20 1.1E-24 194.4 15.3 160 1-162 78-262 (452)
275 2o6s_A Variable lymphocyte rec 99.8 1.4E-19 4.7E-24 168.7 17.0 156 1-163 31-186 (208)
276 3zyj_A Leucine-rich repeat-con 99.8 5E-20 1.7E-24 192.3 15.5 157 2-160 68-249 (440)
277 2z66_A Variable lymphocyte rec 99.8 3.5E-20 1.2E-24 183.7 13.6 178 1-179 81-263 (306)
278 2xot_A Amphoterin-induced prot 99.8 6.6E-20 2.3E-24 186.0 15.3 175 2-179 22-204 (361)
279 2z62_A TOLL-like receptor 4, v 99.8 5E-20 1.7E-24 179.8 13.6 162 1-162 31-197 (276)
280 2z62_A TOLL-like receptor 4, v 99.8 4.2E-20 1.4E-24 180.3 12.3 158 3-163 12-170 (276)
281 3j0a_A TOLL-like receptor 5; m 99.8 8.6E-20 2.9E-24 205.9 16.4 82 2-83 294-375 (844)
282 3v47_A TOLL-like receptor 5B a 99.8 1.4E-19 4.8E-24 189.9 15.7 90 72-161 277-366 (455)
283 1p9a_G Platelet glycoprotein I 99.8 2.3E-19 8E-24 176.0 16.1 153 1-157 58-210 (290)
284 2xot_A Amphoterin-induced prot 99.8 5.2E-20 1.8E-24 186.8 11.4 158 1-158 42-205 (361)
285 2id5_A Lingo-1, leucine rich r 99.8 1.2E-19 4E-24 191.7 14.2 162 1-162 35-196 (477)
286 3v47_A TOLL-like receptor 5B a 99.8 7.5E-20 2.6E-24 191.9 12.2 139 22-160 275-413 (455)
287 4ezg_A Putative uncharacterize 99.8 4.7E-19 1.6E-23 163.5 15.5 148 1-156 47-195 (197)
288 1wwl_A Monocyte differentiatio 99.8 6.8E-20 2.3E-24 182.1 10.3 161 1-163 98-273 (312)
289 1zth_A RIO1 serine protein kin 99.8 5.3E-20 1.8E-24 177.3 8.5 135 290-438 50-219 (258)
290 3vq2_A TLR4, TOLL-like recepto 99.8 1.7E-19 5.7E-24 196.5 13.4 155 2-157 380-536 (606)
291 3t6q_A CD180 antigen; protein- 99.8 5.2E-19 1.8E-23 192.5 15.3 160 2-162 380-543 (606)
292 1xku_A Decorin; proteoglycan, 99.8 1.3E-18 4.4E-23 174.4 16.1 157 2-162 125-283 (330)
293 2xwt_C Thyrotropin receptor; s 99.8 4.8E-19 1.7E-23 168.8 11.9 159 1-163 34-201 (239)
294 3t6q_A CD180 antigen; protein- 99.8 4.3E-19 1.5E-23 193.2 13.1 163 1-163 36-200 (606)
295 2z80_A TOLL-like receptor 2, v 99.8 2E-19 7E-24 182.0 9.8 156 1-156 55-212 (353)
296 4eco_A Uncharacterized protein 99.8 1.4E-19 4.6E-24 197.6 8.8 156 2-159 85-347 (636)
297 1ziw_A TOLL-like receptor 3; i 99.8 1.7E-18 5.7E-23 191.2 17.2 178 2-179 409-624 (680)
298 1w8a_A SLIT protein; signaling 99.8 1E-18 3.6E-23 160.4 13.0 132 25-159 11-143 (192)
299 2v9t_B SLIT homolog 2 protein 99.8 9.1E-19 3.1E-23 164.4 12.9 132 1-132 35-166 (220)
300 1wwl_A Monocyte differentiatio 99.8 3E-19 1E-23 177.4 10.1 153 1-157 124-289 (312)
301 2xwt_C Thyrotropin receptor; s 99.8 5E-19 1.7E-23 168.7 10.9 131 23-155 32-169 (239)
302 4g8a_A TOLL-like receptor 4; l 99.8 4.5E-19 1.5E-23 194.0 12.1 157 4-163 37-194 (635)
303 3vq2_A TLR4, TOLL-like recepto 99.8 5.4E-19 1.9E-23 192.4 12.6 155 3-160 16-171 (606)
304 1w8a_A SLIT protein; signaling 99.8 1.2E-18 4E-23 160.0 12.8 132 1-135 11-143 (192)
305 2id5_A Lingo-1, leucine rich r 99.8 7E-19 2.4E-23 185.7 13.0 162 1-162 59-220 (477)
306 4glp_A Monocyte differentiatio 99.8 5.8E-19 2E-23 175.2 11.0 161 1-163 94-271 (310)
307 3zyi_A Leucine-rich repeat-con 99.8 2.2E-18 7.4E-23 180.5 15.9 178 1-180 102-306 (452)
308 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-18 4.2E-23 163.6 12.3 133 1-133 35-168 (220)
309 3oja_B Anopheles plasmodium-re 99.8 2.1E-18 7E-23 187.1 15.4 161 1-163 78-275 (597)
310 3zyj_A Leucine-rich repeat-con 99.8 2.2E-18 7.4E-23 179.9 14.8 177 1-179 115-294 (440)
311 2z80_A TOLL-like receptor 2, v 99.8 4.9E-19 1.7E-23 179.2 9.6 161 1-161 79-241 (353)
312 4g8a_A TOLL-like receptor 4; l 99.8 2.3E-18 7.8E-23 188.4 15.5 162 1-162 55-221 (635)
313 2ft3_A Biglycan; proteoglycan, 99.8 3.5E-18 1.2E-22 171.3 15.3 153 1-160 57-211 (332)
314 3o6n_A APL1; leucine-rich repe 99.8 3.6E-18 1.2E-22 175.3 15.4 160 2-163 73-269 (390)
315 1ziw_A TOLL-like receptor 3; i 99.8 2.2E-18 7.5E-23 190.3 14.7 163 1-163 28-192 (680)
316 3o6n_A APL1; leucine-rich repe 99.8 5.1E-18 1.7E-22 174.2 16.1 86 1-86 96-181 (390)
317 3oja_B Anopheles plasmodium-re 99.8 5E-18 1.7E-22 184.1 16.4 86 1-86 102-187 (597)
318 1h6u_A Internalin H; cell adhe 99.8 5.9E-18 2E-22 167.6 15.5 146 2-159 45-190 (308)
319 3e6j_A Variable lymphocyte rec 99.8 5.6E-18 1.9E-22 160.1 14.7 132 1-133 43-174 (229)
320 2ft3_A Biglycan; proteoglycan, 99.8 2.9E-18 9.9E-23 172.0 13.4 158 1-162 105-284 (332)
321 2z63_A TOLL-like receptor 4, v 99.8 1.7E-18 5.9E-23 187.0 12.5 160 2-161 32-196 (570)
322 1xku_A Decorin; proteoglycan, 99.8 8.6E-18 2.9E-22 168.4 16.7 156 1-162 55-212 (330)
323 3oja_A Leucine-rich immune mol 99.8 1.3E-18 4.5E-23 183.4 10.9 156 1-160 37-209 (487)
324 4glp_A Monocyte differentiatio 99.8 2.4E-18 8.2E-23 170.8 12.1 154 1-157 120-287 (310)
325 4eco_A Uncharacterized protein 99.8 3.8E-18 1.3E-22 186.1 14.8 145 2-149 381-543 (636)
326 4ecn_A Leucine-rich repeat pro 99.8 6.1E-19 2.1E-23 196.3 8.4 156 2-159 327-589 (876)
327 2z63_A TOLL-like receptor 4, v 99.8 3.1E-18 1.1E-22 185.0 13.0 161 1-162 350-514 (570)
328 1h6t_A Internalin B; cell adhe 99.7 1.1E-17 3.8E-22 164.1 15.4 145 1-157 49-193 (291)
329 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 6.7E-18 2.3E-22 181.9 14.9 156 1-160 356-515 (562)
330 2z7x_B TOLL-like receptor 1, v 99.7 5.7E-18 1.9E-22 180.8 13.6 149 2-155 306-457 (520)
331 3j0a_A TOLL-like receptor 5; m 99.7 4.6E-18 1.6E-22 191.8 13.1 160 1-160 27-192 (844)
332 4ecn_A Leucine-rich repeat pro 99.7 1.8E-18 6.3E-23 192.4 9.3 157 1-162 451-638 (876)
333 1h6u_A Internalin H; cell adhe 99.7 2.1E-17 7.3E-22 163.6 15.7 147 1-159 66-212 (308)
334 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 7.4E-18 2.5E-22 181.6 13.3 138 19-159 350-490 (562)
335 1h6t_A Internalin B; cell adhe 99.7 1.5E-17 5E-22 163.3 14.2 145 1-157 71-215 (291)
336 2z7x_B TOLL-like receptor 1, v 99.7 8.2E-18 2.8E-22 179.5 13.2 158 1-163 250-441 (520)
337 1xeu_A Internalin C; cellular 99.7 1.7E-17 5.9E-22 160.2 14.2 143 2-157 45-187 (263)
338 2z81_A CD282 antigen, TOLL-lik 99.7 3.6E-18 1.2E-22 183.6 10.2 154 2-155 30-185 (549)
339 2ell_A Acidic leucine-rich nuc 99.7 1.2E-17 4.1E-22 149.8 11.8 137 19-157 21-162 (168)
340 2wfh_A SLIT homolog 2 protein 99.7 3.3E-17 1.1E-21 150.3 13.6 131 25-159 13-143 (193)
341 3o53_A Protein LRIM1, AGAP0063 99.7 5.7E-18 2E-22 168.6 7.9 155 1-159 37-208 (317)
342 2wfh_A SLIT homolog 2 protein 99.7 3.8E-17 1.3E-21 149.9 12.8 128 1-132 13-140 (193)
343 2ell_A Acidic leucine-rich nuc 99.7 2.1E-17 7.1E-22 148.3 10.5 133 1-136 27-164 (168)
344 2z81_A CD282 antigen, TOLL-lik 99.7 2.1E-17 7.2E-22 177.6 12.5 158 3-163 10-169 (549)
345 3o53_A Protein LRIM1, AGAP0063 99.7 9.5E-18 3.2E-22 167.0 8.8 143 2-155 84-227 (317)
346 3oja_A Leucine-rich immune mol 99.7 8.4E-18 2.9E-22 177.2 8.9 167 1-179 83-252 (487)
347 1m9s_A Internalin B; cell inva 99.7 4.7E-17 1.6E-21 175.0 14.8 145 1-157 46-190 (605)
348 2o6r_A Variable lymphocyte rec 99.7 7.3E-17 2.5E-21 146.0 13.4 134 23-159 8-141 (177)
349 2je0_A Acidic leucine-rich nuc 99.7 2E-17 7E-22 145.1 9.4 129 21-151 16-149 (149)
350 4fmz_A Internalin; leucine ric 99.7 7.3E-17 2.5E-21 162.8 14.6 147 2-160 159-305 (347)
351 1m9s_A Internalin B; cell inva 99.7 6.9E-17 2.4E-21 173.7 14.6 146 1-158 68-213 (605)
352 2o6r_A Variable lymphocyte rec 99.7 1.2E-16 4.1E-21 144.6 13.9 131 2-135 11-141 (177)
353 4ezg_A Putative uncharacterize 99.7 4E-17 1.4E-21 150.5 10.2 135 18-158 40-175 (197)
354 2je0_A Acidic leucine-rich nuc 99.7 3.7E-17 1.3E-21 143.4 8.9 125 1-127 20-149 (149)
355 4fmz_A Internalin; leucine ric 99.7 1.1E-16 3.7E-21 161.5 13.6 149 1-159 180-328 (347)
356 4b8c_D Glucose-repressible alc 99.7 8.5E-18 2.9E-22 185.3 5.1 122 37-162 215-336 (727)
357 4gyi_A RIO2 kinase; protein ki 99.7 3.2E-17 1.1E-21 163.8 8.7 137 289-438 97-265 (397)
358 3cvr_A Invasion plasmid antige 99.7 1.5E-16 5.2E-21 169.2 13.0 142 2-164 104-252 (571)
359 1xeu_A Internalin C; cellular 99.7 8.8E-17 3E-21 155.2 10.0 142 3-157 24-165 (263)
360 1o6v_A Internalin A; bacterial 99.7 4.1E-16 1.4E-20 163.8 15.6 144 2-157 203-346 (466)
361 1o6v_A Internalin A; bacterial 99.7 3.5E-16 1.2E-20 164.4 14.6 147 1-159 224-370 (466)
362 1a9n_A U2A', U2A'; complex (nu 99.7 1.4E-16 4.9E-21 143.9 10.0 135 16-155 13-153 (176)
363 1dce_A Protein (RAB geranylger 99.7 5.8E-18 2E-22 181.0 -0.6 153 2-160 353-551 (567)
364 4b8c_D Glucose-repressible alc 99.6 2.8E-16 9.6E-21 173.2 9.7 157 3-163 196-362 (727)
365 3goz_A Leucine-rich repeat-con 99.6 8.1E-17 2.8E-21 163.4 4.6 163 1-163 1-188 (362)
366 2ast_B S-phase kinase-associat 99.6 7.5E-17 2.5E-21 161.9 3.6 161 1-162 73-243 (336)
367 1ds9_A Outer arm dynein; leuci 99.6 4.6E-18 1.6E-22 157.0 -5.1 146 3-155 23-185 (198)
368 2ca6_A RAN GTPase-activating p 99.6 3.3E-17 1.1E-21 167.8 0.7 157 1-157 63-259 (386)
369 4ay9_X Follicle-stimulating ho 99.6 1.3E-15 4.4E-20 153.7 11.7 159 1-160 33-220 (350)
370 2ast_B S-phase kinase-associat 99.6 1E-16 3.4E-21 161.0 3.4 152 2-153 97-258 (336)
371 3bz5_A Internalin-J, INLJ; leu 99.6 5.4E-15 1.8E-19 154.4 16.0 139 1-156 88-226 (457)
372 3goz_A Leucine-rich repeat-con 99.6 1.2E-16 4E-21 162.2 3.1 159 1-159 25-213 (362)
373 2ca6_A RAN GTPase-activating p 99.6 8.3E-17 2.8E-21 164.9 1.3 164 1-164 97-300 (386)
374 3cvr_A Invasion plasmid antige 99.6 5.9E-15 2E-19 157.0 15.2 136 1-160 62-197 (571)
375 3bz5_A Internalin-J, INLJ; leu 99.6 9E-15 3.1E-19 152.7 15.7 144 1-161 109-252 (457)
376 1a9n_A U2A', U2A'; complex (nu 99.6 1.6E-15 5.4E-20 137.0 8.5 127 1-132 22-154 (176)
377 3g06_A SSPH2 (leucine-rich rep 99.6 6.9E-15 2.4E-19 158.4 14.8 86 70-164 221-306 (622)
378 1dce_A Protein (RAB geranylger 99.6 1.8E-15 6E-20 161.8 7.6 122 23-149 442-567 (567)
379 3g39_A Variable lymphocyte rec 99.6 1.4E-14 4.8E-19 129.8 11.6 108 23-133 10-117 (170)
380 2r9u_A Variable lymphocyte rec 99.6 1.9E-14 6.6E-19 129.3 11.6 106 24-132 14-119 (174)
381 3g39_A Variable lymphocyte rec 99.5 2.1E-14 7.3E-19 128.6 11.6 110 47-159 10-119 (170)
382 4ay9_X Follicle-stimulating ho 99.5 1.7E-14 5.7E-19 145.5 12.2 157 2-161 13-173 (350)
383 2r9u_A Variable lymphocyte rec 99.5 4.2E-14 1.4E-18 127.1 11.7 109 48-159 14-122 (174)
384 1jl5_A Outer protein YOPM; leu 99.5 1.2E-13 4.2E-18 144.0 15.7 138 2-157 115-252 (454)
385 1jl5_A Outer protein YOPM; leu 99.5 1.3E-13 4.6E-18 143.7 15.7 139 1-160 94-232 (454)
386 3g06_A SSPH2 (leucine-rich rep 99.5 1.3E-13 4.4E-18 148.5 15.3 112 2-132 44-155 (622)
387 1ds9_A Outer arm dynein; leuci 99.5 3.2E-16 1.1E-20 144.5 -6.2 139 17-160 13-158 (198)
388 1z7x_W Ribonuclease inhibitor; 99.5 3.8E-15 1.3E-19 156.3 -1.0 156 1-156 202-384 (461)
389 1z7x_W Ribonuclease inhibitor; 99.5 4E-15 1.4E-19 156.2 -1.5 163 1-163 173-362 (461)
390 3un9_A NLR family member X1; l 99.4 7.7E-15 2.6E-19 148.6 -3.6 162 1-162 75-259 (372)
391 3sb4_A Hypothetical leucine ri 99.4 7.1E-13 2.4E-17 132.4 10.3 158 1-161 52-316 (329)
392 2ifg_A High affinity nerve gro 99.4 1E-12 3.5E-17 132.3 10.0 104 25-131 11-116 (347)
393 2ifg_A High affinity nerve gro 99.4 3.5E-12 1.2E-16 128.3 13.1 108 49-159 11-120 (347)
394 3sb4_A Hypothetical leucine ri 99.3 1.7E-11 5.9E-16 122.3 11.6 103 45-149 225-328 (329)
395 3tm0_A Aminoglycoside 3'-phosp 99.2 1.3E-11 4.3E-16 119.0 8.5 136 291-436 18-212 (263)
396 3un9_A NLR family member X1; l 99.2 7.1E-13 2.4E-17 134.1 -3.2 154 2-155 105-283 (372)
397 3ogk_B Coronatine-insensitive 99.1 9.2E-12 3.1E-16 134.8 1.6 139 19-157 375-528 (592)
398 1nd4_A Aminoglycoside 3'-phosp 99.1 1.2E-10 4.2E-15 111.8 8.8 126 296-436 29-213 (264)
399 3dxp_A Putative acyl-COA dehyd 99.1 4E-10 1.4E-14 113.8 10.1 140 292-437 43-248 (359)
400 3ogk_B Coronatine-insensitive 99.0 1.1E-10 3.8E-15 126.2 4.7 126 1-127 115-252 (592)
401 2p1m_B Transport inhibitor res 98.9 2.3E-10 8E-15 123.8 3.5 124 2-126 109-243 (594)
402 2p1m_B Transport inhibitor res 98.9 1.1E-10 3.9E-15 126.2 -0.4 87 67-154 429-518 (594)
403 3sg8_A APH(2'')-ID; antibiotic 98.9 4.4E-10 1.5E-14 110.6 3.0 184 293-489 26-287 (304)
404 4fdw_A Leucine rich hypothetic 98.9 8E-09 2.8E-13 105.3 12.1 145 2-152 184-333 (401)
405 4fdw_A Leucine rich hypothetic 98.8 2E-08 6.7E-13 102.5 12.7 144 3-154 140-283 (401)
406 2ra8_A Uncharacterized protein 98.8 3.4E-09 1.2E-13 106.2 4.3 137 16-156 133-293 (362)
407 1io0_A Tropomodulin; LRR prote 98.7 1.3E-09 4.5E-14 98.6 0.3 115 41-155 31-164 (185)
408 1io0_A Tropomodulin; LRR prote 98.7 3.8E-09 1.3E-13 95.6 2.3 119 13-131 27-164 (185)
409 3rw6_A Nuclear RNA export fact 98.7 2.6E-09 8.8E-14 101.6 -0.1 80 67-148 167-257 (267)
410 2ra8_A Uncharacterized protein 98.6 3.5E-08 1.2E-12 98.8 7.4 140 14-157 164-322 (362)
411 3rw6_A Nuclear RNA export fact 98.6 1.5E-08 5E-13 96.3 2.9 105 18-124 137-257 (267)
412 3r70_A Aminoglycoside phosphot 98.6 1E-07 3.5E-12 94.3 8.2 130 292-437 42-237 (320)
413 3d1u_A Putative fructosamine-3 98.5 5.9E-07 2E-11 87.1 12.2 76 292-372 20-98 (288)
414 3tdw_A Gentamicin resistance p 98.5 7E-07 2.4E-11 87.6 12.2 134 293-437 25-224 (306)
415 3ovc_A Hygromycin-B 4-O-kinase 98.3 1.2E-06 4.1E-11 88.0 9.6 75 292-372 46-122 (362)
416 4gkh_A Aminoglycoside 3'-phosp 98.3 1.7E-06 5.9E-11 83.1 10.4 132 294-436 31-222 (272)
417 3ats_A Putative uncharacterize 98.3 1.7E-06 5.8E-11 86.9 9.1 81 293-373 26-122 (357)
418 3e4g_A ATP synthase subunit S, 98.2 8.7E-07 3E-11 78.0 4.1 84 46-129 61-150 (176)
419 3e4g_A ATP synthase subunit S, 98.1 9.4E-07 3.2E-11 77.8 2.6 92 63-154 54-151 (176)
420 4gt6_A Cell surface protein; l 98.1 8.4E-06 2.9E-10 83.0 9.4 109 40-152 259-367 (394)
421 2olc_A MTR kinase, methylthior 98.0 1.7E-05 5.8E-10 80.8 10.8 75 292-369 35-120 (397)
422 2q83_A YTAA protein; 2635576, 98.0 1.3E-05 4.5E-10 79.8 8.1 139 293-436 38-251 (346)
423 4fs7_A Uncharacterized protein 97.9 4.7E-05 1.6E-09 77.4 12.0 130 16-152 247-376 (394)
424 4fs7_A Uncharacterized protein 97.9 4.9E-05 1.7E-09 77.3 11.7 136 3-147 258-393 (394)
425 4h09_A Hypothetical leucine ri 97.9 4.9E-05 1.7E-09 76.8 11.5 134 15-152 210-343 (379)
426 4h09_A Hypothetical leucine ri 97.8 4.9E-05 1.7E-09 76.8 10.0 127 13-143 231-357 (379)
427 4gt6_A Cell surface protein; l 97.8 0.00015 5.3E-09 73.5 13.0 83 65-150 260-342 (394)
428 1pgv_A TMD-1, tropomodulin TMD 97.8 6.4E-06 2.2E-10 73.9 1.9 113 43-155 38-170 (197)
429 1pgv_A TMD-1, tropomodulin TMD 97.7 9.2E-06 3.2E-10 72.9 2.1 86 19-104 38-136 (197)
430 3f7w_A Putative fructosamine-3 97.7 0.00019 6.4E-09 69.5 10.5 75 292-371 20-97 (288)
431 3jr1_A Putative fructosamine-3 97.6 0.00053 1.8E-08 66.8 12.1 135 293-433 42-232 (312)
432 2pyw_A Uncharacterized protein 97.5 0.00037 1.3E-08 71.3 11.3 79 407-486 232-313 (420)
433 3dxq_A Choline/ethanolamine ki 97.2 0.00084 2.9E-08 65.3 8.1 136 292-437 23-202 (301)
434 1zyl_A Hypothetical protein YI 97.1 0.0029 1E-07 62.1 11.4 139 294-436 33-222 (328)
435 3csv_A Aminoglycoside phosphot 97.1 0.0035 1.2E-07 61.8 11.7 139 293-437 24-217 (333)
436 3rfe_A Platelet glycoprotein I 97.0 0.00098 3.3E-08 55.7 6.3 55 26-82 12-67 (130)
437 1nw1_A Choline kinase (49.2 KD 97.0 0.0019 6.4E-08 66.2 9.8 72 293-371 79-159 (429)
438 3rfe_A Platelet glycoprotein I 97.0 0.0012 4E-08 55.2 6.6 55 50-106 12-67 (130)
439 3feg_A Choline/ethanolamine ki 97.0 0.0012 4.1E-08 66.1 7.7 138 293-436 56-253 (379)
440 2ppq_A HSK, HK, homoserine kin 96.9 0.0013 4.4E-08 64.5 7.0 141 293-436 28-216 (322)
441 2yle_A Protein spire homolog 1 96.8 0.012 4E-07 53.1 11.9 102 370-488 34-135 (229)
442 3c5i_A Choline kinase; choline 96.5 0.0054 1.9E-07 61.4 8.3 73 293-371 39-121 (369)
443 2qg7_A Ethanolamine kinase PV0 96.3 0.018 6E-07 59.2 10.9 73 293-371 114-188 (458)
444 3i1a_A Spectinomycin phosphotr 96.0 0.032 1.1E-06 54.9 10.5 31 407-437 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.6 0.031 1E-06 56.2 8.5 139 293-436 58-279 (401)
446 3mes_A Choline kinase; malaria 95.4 0.048 1.7E-06 55.2 9.5 73 293-371 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.3 0.24 8.3E-06 49.8 7.3 30 408-437 245-280 (401)
448 2ks1_B Epidermal growth factor 91.0 0.21 7.2E-06 32.0 3.3 10 224-233 30-39 (44)
449 2l2t_A Receptor tyrosine-prote 89.9 0.25 8.6E-06 31.6 2.9 10 225-234 30-39 (44)
450 2jwa_A Receptor tyrosine-prote 89.8 0.24 8.4E-06 31.5 2.8 17 218-234 23-39 (44)
451 4ano_A ESSB; membrane protein, 82.1 4.8 0.00017 36.1 8.2 114 341-490 48-163 (219)
452 2k1k_A Ephrin type-A receptor 81.4 0.83 2.8E-05 28.2 2.0 21 200-220 7-27 (38)
453 4ann_A ESSB; membrane protein, 80.7 3.8 0.00013 36.7 7.0 116 341-490 43-158 (215)
454 3cxl_A N-chimerin; SH2, RHO-GA 79.9 0.23 7.8E-06 51.0 -1.5 60 292-354 147-215 (463)
455 2jwa_A Receptor tyrosine-prote 67.7 4.1 0.00014 25.9 2.6 30 206-235 14-43 (44)
456 1iij_A ERBB-2 receptor protein 66.2 2.6 8.9E-05 25.3 1.4 23 210-232 11-33 (35)
457 2klu_A T-cell surface glycopro 65.4 3.9 0.00013 28.2 2.3 7 219-225 23-29 (70)
458 2lz0_A Uncharacterized protein 57.0 25 0.00085 27.0 6.1 45 10-55 8-52 (100)
459 2lz0_A Uncharacterized protein 55.9 27 0.00091 26.8 6.1 46 33-79 7-52 (100)
460 2l6w_A Beta-type platelet-deri 56.6 3.2 0.00011 25.4 0.0 19 214-232 17-35 (39)
461 3ls8_A Phosphatidylinositol 3- 32.0 1.9E+02 0.0065 30.2 9.7 46 386-436 454-501 (614)
462 2x6h_A GH13170P, VPS34, phosph 29.7 91 0.0031 33.2 6.9 45 387-436 529-575 (696)
463 2l9u_A Receptor tyrosine-prote 27.2 38 0.0013 19.9 2.0 18 215-232 16-33 (40)
464 1e7u_A Phosphatidylinositol 3- 21.7 59 0.002 36.2 3.8 25 412-436 804-828 (961)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-56 Score=446.24 Aligned_cols=258 Identities=25% Similarity=0.409 Sum_probs=205.9
Q ss_pred hhhccccccCceEEEEEEeC------CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 290 ATAEIMGKSTYGTVYKATLE------DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 290 ~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
.+.+.||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+ .+..+|||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~lV~ 122 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLLMVF 122 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEE
Confidence 45678999999999999864 478899999987655566789999999999999999999999986 56899999
Q ss_pred eeCCCCChhhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEee
Q 008031 364 DYMPHGSLATFLHARGP------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISD 431 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~D 431 (580)
|||++|+|.++++.... ..+++|.++++++.|||+||+|||+ ++|+||||||+|||+++++.+||+|
T Consensus 123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG-LHFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEETTTEEEECC
T ss_pred EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHhhEEECCCCcEEEcc
Confidence 99999999999986532 2468999999999999999999999 5999999999999999999999999
Q ss_pred ccccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhc
Q 008031 432 FGLSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEW 509 (580)
Q Consensus 432 fg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 509 (580)
||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...+..++...+ ..+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i---~~g~~ 278 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI---TQGRE 278 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH---HHTCC
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH---HcCCC
Confidence 9999876543322 2334579999999999999999999999999999999999 99999876644433332 22211
Q ss_pred cccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
. . .+...+ .++.+++.+||+.||++||||.||+++|+.+.+..
T Consensus 279 ~------~---~p~~~~---~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 279 L------E---RPRACP---PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp C------C---CCTTCC---HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred C------C---Cccccc---HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 1 0 111222 35668888999999999999999999999987643
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-56 Score=440.03 Aligned_cols=259 Identities=27% Similarity=0.456 Sum_probs=211.6
Q ss_pred HhhhccccccCceEEEEEEeC------CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE------DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
+.+.+.||+|+||.||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+ ++..++|
T Consensus 15 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~lV 93 (299)
T 4asz_A 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLIMV 93 (299)
T ss_dssp EEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEEE
T ss_pred eEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-CCEEEEE
Confidence 345789999999999999864 477899999987655566789999999999999999999999987 6689999
Q ss_pred EeeCCCCChhhhhhhcC----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeec
Q 008031 363 FDYMPHGSLATFLHARG----------PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDF 432 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Df 432 (580)
||||++|+|.++++..+ ....++|.++++++.|||+||+|||+ ++|+||||||+|||+++++.+||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCccCHhhEEECCCCcEEECCc
Confidence 99999999999997642 23569999999999999999999999 59999999999999999999999999
Q ss_pred ccccccccccccce-eeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhcc
Q 008031 433 GLSRLMTAAANVNV-IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWT 510 (580)
Q Consensus 433 g~~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 510 (580)
|+|+.......... ....||++|||||++.+..|+.++|||||||++|||+| |+.||...+..++...+ ..+...
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i---~~~~~~ 249 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI---TQGRVL 249 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---HHTCCC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HcCCCC
Confidence 99986654433222 23458999999999999999999999999999999999 99999876644433332 222211
Q ss_pred ccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 511 NEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
..+...+ .++.+++.+||+.||++||||.|+++.|+++....
T Consensus 250 ---------~~p~~~~---~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 250 ---------QRPRTCP---QEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp ---------CCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred ---------CCCccch---HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 0111222 35678888999999999999999999999886543
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.9e-56 Score=436.67 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=208.0
Q ss_pred hhhccccccCceEEEEEEeC------CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 290 ATAEIMGKSTYGTVYKATLE------DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 290 ~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
.+.+.||+|+||.||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+ ++..++|
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~~lV 107 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-DQPLSMI 107 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEE
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-CCEEEEE
Confidence 35688999999999999863 467899999975543 345689999999999999999999999986 6689999
Q ss_pred EeeCCCCChhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEE
Q 008031 363 FDYMPHGSLATFLHARGP-------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKI 429 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl 429 (580)
||||++|+|.++|..+.+ ...+++.++++++.|||+||+|||+ ++|+||||||+|||+++++.+||
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCCCccccceEECCCCCEEE
Confidence 999999999999976432 2358999999999999999999999 49999999999999999999999
Q ss_pred eeccccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhh
Q 008031 430 SDFGLSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKE 507 (580)
Q Consensus 430 ~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 507 (580)
+|||+|+........ ......||++|||||++.++.|+.++|||||||++|||+| |+.||.+.+..++.+.+. .+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~---~~ 263 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR---NR 263 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH---TT
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---cC
Confidence 999999876544332 2334579999999999999999999999999999999999 899998776544433332 22
Q ss_pred hccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 008031 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560 (580)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~ 560 (580)
... ..++.+ ..++.++|.+||+.||++||||.||+++|+.+
T Consensus 264 ~~~---------~~p~~~---~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 264 QVL---------PCPDDC---PAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp CCC---------CCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCC---------CCcccc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 111 111222 23566888999999999999999999999875
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-55 Score=428.63 Aligned_cols=257 Identities=27% Similarity=0.440 Sum_probs=201.1
Q ss_pred hhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 290 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
.+.+.||+|+||.||+|++.+ .||||+++.... ...+.|.+|++++++++|||||+++|+|.+ +..+||||||+
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~iVmEy~~ 114 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--DNLAIVTQWCE 114 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEEECCS
T ss_pred EEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--CeEEEEEEcCC
Confidence 457889999999999998763 699999874332 334679999999999999999999999854 57899999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc-ccce
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA-NVNV 446 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 446 (580)
+|+|.++++.. ...+++.++.+++.|||+||+|||+ ++|+||||||+|||+++++.+||+|||+|+...... ....
T Consensus 115 gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~-~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~ 191 (307)
T 3omv_A 115 GSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA-KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp SCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH-TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred CCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH-CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence 99999999764 3469999999999999999999999 599999999999999999999999999998765432 2233
Q ss_pred eeecCccccCCcccccc---CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 447 IATAGALGYRAPELSKL---KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
....||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+.+..+. +...+..... .+......+
T Consensus 192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~---~~~~~~~~~~----~p~~~~~~~ 264 (307)
T 3omv_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---IIFMVGRGYA----SPDLSKLYK 264 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHTTCC----CCCSTTSCT
T ss_pred cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH---HHHHHhcCCC----CCCcccccc
Confidence 45679999999999853 4689999999999999999999999987654322 2222222111 111111112
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
.. ..++.+++.+||+.||++||||.||+++|+.++..
T Consensus 265 ~~---~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 265 NC---PKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TS---CHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cc---hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 22 23566788899999999999999999999988643
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-54 Score=429.91 Aligned_cols=248 Identities=19% Similarity=0.295 Sum_probs=207.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|+..+.||+|+||.||+|.+. +|+.||||++........+.+.+|+++|++++|||||++++++.+ ++..|||||||+
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~~ 154 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 154 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEECCCT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeCCC
Confidence 556788999999999999986 799999999976655556678999999999999999999999987 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
||+|.+++... .+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+....... ...
T Consensus 155 gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~ 228 (346)
T 4fih_A 155 GGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRK 228 (346)
T ss_dssp TEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBC
T ss_pred CCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-ccc
Confidence 99999999763 599999999999999999999994 999999999999999999999999999987654322 233
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
...||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+.... +...... . .+....
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~---i~~~~~~-~---------~~~~~~ 295 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---IRDNLPP-R---------LKNLHK 295 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH---HHHSSCC-C---------CSCGGG
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH---HHcCCCC-C---------CCcccc
Confidence 56899999999999999999999999999999999999999987554333322 2221111 0 111111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
...++.+++.+||+.||++|||+.|+++|
T Consensus 296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 296 VSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 22366788899999999999999999986
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.4e-53 Score=418.96 Aligned_cols=252 Identities=21% Similarity=0.262 Sum_probs=205.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|...+.||+|+||.||+|++. +|+.||||+++.... ..+|+.++++++|||||++++++.+ ++..|||||||+
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~~ 133 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVRE-GPWVNIFMELLE 133 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEE-TTEEEEEECCCT
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeccC
Confidence 445678999999999999986 799999999965422 2469999999999999999999987 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC-CeEEeeccccccccccccc--
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST-NAKISDFGLSRLMTAAANV-- 444 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~-- 444 (580)
||+|.++++..+ .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ ++||+|||+|+........
T Consensus 134 gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 134 GGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHT-RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp TCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHT-TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 999999998753 69999999999999999999999 4999999999999999887 6999999999876543221
Q ss_pred --ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccC
Q 008031 445 --NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDA 522 (580)
Q Consensus 445 --~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (580)
......||+.|||||++.+..|+.++||||+||++|||+||+.||...+..++...+.. +... .....
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~---~~~~-------~~~~~ 279 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS---EPPP-------IREIP 279 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH---SCCG-------GGGSC
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc---CCCC-------chhcC
Confidence 12235799999999999999999999999999999999999999988776665544432 2111 01111
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 523 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
+..+ ..+.+++.+||+.||++|||+.|++++|.....+
T Consensus 280 ~~~s---~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 280 PSCA---PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp TTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCC---HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 2222 3556788899999999999999999999876543
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.7e-54 Score=428.53 Aligned_cols=249 Identities=23% Similarity=0.385 Sum_probs=201.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|.+.+.||+|+||.||+|++. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+ ++..||||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-~~~~yiVmEy 104 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-NGSLYIVMDY 104 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEEeC
Confidence 667899999999999999986 799999999965432 234678999999999999999999999987 6789999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
|+||+|.+++...+ ...+++.+++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|+....... .
T Consensus 105 ~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 181 (350)
T 4b9d_A 105 CEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE-L 181 (350)
T ss_dssp CTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH-TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH-H
T ss_pred CCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc-c
Confidence 99999999997643 3457899999999999999999999 4999999999999999999999999999987654322 2
Q ss_pred eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 446 VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
.....||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+. .+.+..+..+.... .....
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~---~~~~~~i~~~~~~~---------~~~~~ 249 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM---KNLVLKIISGSFPP---------VSLHY 249 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHTCCCC---------CCTTS
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---HHHHHHHHcCCCCC---------CCccC
Confidence 2345799999999999999999999999999999999999999976543 33344444333211 01112
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..++.+++.+||+.||++|||+.|+++|
T Consensus 250 ---s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 250 ---SYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2356688889999999999999999875
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-53 Score=417.71 Aligned_cols=246 Identities=21% Similarity=0.328 Sum_probs=206.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+ ++..|+|||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~yivmE 112 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFGLS 112 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEe
Confidence 678899999999999999986 79999999996532 2345678999999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc-c
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA-N 443 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 443 (580)
|++||+|.+++.+.+ .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.+.... .
T Consensus 113 y~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 113 YAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred cCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 999999999998753 699999999999999999999995 99999999999999999999999999998775433 2
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.......||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+.. +....+...... . +.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~i~~~~~~-------~---p~ 255 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG---LIFAKIIKLEYD-------F---PE 255 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHTCCC-------C---CT
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCCC-------C---Cc
Confidence 3344568999999999999999999999999999999999999999765433 333333332211 1 11
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQ 555 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~ 555 (580)
... .++.+++.+||+.||++|||+.|++.
T Consensus 256 ~~s---~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 256 KFF---PKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp TCC---HHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred ccC---HHHHHHHHHHccCCHhHCcChHHHcC
Confidence 112 35668889999999999999998754
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-52 Score=408.33 Aligned_cols=245 Identities=22% Similarity=0.368 Sum_probs=196.1
Q ss_pred hhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECC---CCcEEEEEe
Q 008031 291 TAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGP---KGEKLLVFD 364 (580)
Q Consensus 291 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---~~~~~lv~e 364 (580)
+.+.||+|+||.||+|.+. ++..||+|++..... ...+.|.+|++++++++|||||++++++... +...+||||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 3467999999999999986 789999999865432 2345699999999999999999999998642 345799999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccCCCCCCCeeeC-CCCCeEEeecccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN--IIHGNLTSSNVLLD-DSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~--i~H~Dlk~~Nil~~-~~~~~kl~Dfg~~~~~~~~ 441 (580)
||++|+|.+++++. ..+++..+..++.||+.||+|||++ + |+||||||+|||++ .++.+||+|||+|+.....
T Consensus 110 y~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 110 LMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred CCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 99999999999875 3689999999999999999999994 7 99999999999998 4789999999999864332
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
......||+.|||||++.+ .|+.++|||||||++|||+||+.||.+... .......+..+... .....
T Consensus 186 ---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~~~~~i~~~~~~-----~~~~~- 253 (290)
T 3fpq_A 186 ---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVKP-----ASFDK- 253 (290)
T ss_dssp ---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTCCC-----GGGGG-
T ss_pred ---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHHHHHHHHcCCCC-----CCCCc-
Confidence 2345689999999998875 699999999999999999999999975432 22222222221111 11111
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.. ..++.+++.+||+.||++|||+.|+++|
T Consensus 254 --~~---~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 254 --VA---IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --CC---CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --cC---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 1256688899999999999999999876
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.3e-53 Score=426.38 Aligned_cols=261 Identities=25% Similarity=0.356 Sum_probs=210.8
Q ss_pred HHhhhccccccCceEEEEEEeCC------CCEEEEEEccccccc-cHHHHHHHHHHHhcCCC-CcceeeeeEEECCCCcE
Q 008031 288 LCATAEIMGKSTYGTVYKATLED------GSQVAVKRLREKITK-GQREFESEVSLLGKIRH-PNLLALRAYYLGPKGEK 359 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~ 359 (580)
.|.+.+.||+|+||.||+|.+.. ++.||||.++..... ..+.|.+|+++|.++.| ||||+++|+|...++..
T Consensus 65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~ 144 (353)
T 4ase_A 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 144 (353)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEE
Confidence 35678899999999999998642 357999999765443 34679999999999965 89999999998756678
Q ss_pred EEEEeeCCCCChhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC
Q 008031 360 LLVFDYMPHGSLATFLHARGP-------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN 426 (580)
Q Consensus 360 ~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~ 426 (580)
++|||||++|+|.++|+.... ...+++.+++.++.|||+||+|||+ ++|+||||||+|||+++++.
T Consensus 145 ~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~-~~iiHRDLK~~NILl~~~~~ 223 (353)
T 4ase_A 145 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKNV 223 (353)
T ss_dssp EEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh-CCeecCccCccceeeCCCCC
Confidence 999999999999999976421 2458999999999999999999999 59999999999999999999
Q ss_pred eEEeeccccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHH
Q 008031 427 AKISDFGLSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASI 504 (580)
Q Consensus 427 ~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 504 (580)
+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+ .+...
T Consensus 224 vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~---~~~~~ 300 (353)
T 4ase_A 224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFCRR 300 (353)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---HHHHH
T ss_pred EEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH---HHHHH
Confidence 999999999876544332 2334568999999999999999999999999999999998 999998765432 22222
Q ss_pred hhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 505 VKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
+..+... ..+... ..++.++|.+||+.||++||||.|++++|+.+.+.
T Consensus 301 i~~g~~~--------~~p~~~---~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 301 LKEGTRM--------RAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHTCCC--------CCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCC--------CCCccC---CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 2222111 111122 23567888899999999999999999999998654
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.9e-53 Score=430.87 Aligned_cols=248 Identities=19% Similarity=0.309 Sum_probs=207.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|+..+.||+|+||.||+|.+. +|+.||||++........+.+.+|+.+|++++|||||++++++.+ ++..|||||||+
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~iVmEy~~ 231 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 231 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-CCEEEEEEeCCC
Confidence 566789999999999999986 799999999976555556678999999999999999999999987 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
||+|.++++.. .+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.+..... ...
T Consensus 232 gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~ 305 (423)
T 4fie_A 232 GGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRK 305 (423)
T ss_dssp TEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CBC
T ss_pred CCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-ccc
Confidence 99999999764 589999999999999999999995 999999999999999999999999999987654322 233
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
..+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+....+ ...... . . ......
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i---~~~~~~-~-----~-~~~~~~-- 373 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPP-R-----L-KNLHKV-- 373 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSCCC-C-----C-SCTTSS--
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HcCCCC-C-----C-cccccC--
Confidence 567999999999999999999999999999999999999999865543333222 221110 0 0 111122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..++.+|+.+||+.||++|||+.|+++|
T Consensus 374 -s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 374 -SPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2356678889999999999999999986
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.9e-53 Score=416.84 Aligned_cols=264 Identities=25% Similarity=0.344 Sum_probs=199.3
Q ss_pred hhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC---cEEEEEeeC
Q 008031 290 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKG---EKLLVFDYM 366 (580)
Q Consensus 290 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~~lv~e~~ 366 (580)
.+.+.||+|+||.||+|++. |+.||||+++.... ....++.|+..+.+++|||||+++++|.+.+. ..+||||||
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 45689999999999999985 89999999865421 12234456666778999999999999986432 579999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCcccCCCCCCCeeeCCCCCeEEeecccccccc
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN-------ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMT 439 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 439 (580)
++|+|.++++.. .+++..+.+++.|+++||+|||++ ++|+||||||+|||++.++++||+|||+|+...
T Consensus 84 ~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 84 EHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp TTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 999999999864 589999999999999999999973 389999999999999999999999999998765
Q ss_pred ccccc---ceeeecCccccCCccccccC------CCCCcccchhHHHHHHHHHcCCCCCCCCCCCCh-----------hH
Q 008031 440 AAANV---NVIATAGALGYRAPELSKLK------KANTKTDVYSLGVTILELLTGKSPGEPLNGAEL-----------PQ 499 (580)
Q Consensus 440 ~~~~~---~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~-----------~~ 499 (580)
..... ......||++|||||++.+. .++.++|||||||++|||+||+.||......+. ..
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 43322 22345799999999998754 467799999999999999999887754332211 11
Q ss_pred HHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 500 WVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
.+...... ...++.+... ....+....+.+++.+||+.||++||||.||++.|+++.++.
T Consensus 240 ~~~~~~~~----~~~rp~~p~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 EMRKVVCE----QKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHTT----SCCCCCCCGG-GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhc----ccCCCCCCcc-ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 11111111 1111111111 112245567889999999999999999999999999987654
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-52 Score=404.55 Aligned_cols=245 Identities=26% Similarity=0.400 Sum_probs=190.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|++.+.||+|+||.||+|.+. +|+.||||+++... ......+.+|++++++++|||||++++++.+ ++..|+|||
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~ivmE 93 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMVIE 93 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEEEe
Confidence 567899999999999999975 79999999996543 2334678999999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+ +|+|.+++.+. ..+++.++..++.||+.||+|||++ ||+||||||+|||+++++++||+|||+|+......
T Consensus 94 y~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-- 166 (275)
T 3hyh_A 94 YA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp CC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred CC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECCCCCEEEeecCCCeecCCCC--
Confidence 99 68999999875 3699999999999999999999995 99999999999999999999999999998764432
Q ss_pred ceeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 445 NVIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
......||+.|||||++.+..| +.++||||+||++|||+||+.||.+.+. ......+...... . +.
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~---~~~~~~i~~~~~~-------~---p~ 233 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI---PVLFKNISNGVYT-------L---PK 233 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTCCC-------C---CT
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHcCCCC-------C---CC
Confidence 2234679999999999998876 5799999999999999999999976443 3333333222211 0 11
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
..+ .++.+++.+||+.||++|||+.|+++|=
T Consensus 234 ~~s---~~~~~li~~~L~~dP~~R~s~~eil~hp 264 (275)
T 3hyh_A 234 FLS---PGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp TSC---HHHHHHHHHHSCSSGGGSCCHHHHHHCH
T ss_pred CCC---HHHHHHHHHHccCChhHCcCHHHHHcCc
Confidence 112 3566888899999999999999999863
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.6e-52 Score=410.05 Aligned_cols=246 Identities=23% Similarity=0.357 Sum_probs=195.5
Q ss_pred HhhhccccccCceEEEEEEeC----CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE----DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++|||||++++++.+ ++..|+|
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~iv 104 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-EGKLYLI 104 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-TTEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEE
Confidence 678899999999999999862 578999999975432 234568899999999999999999999987 6789999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||++||+|.+++.+.+ .+++.++..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|+......
T Consensus 105 mEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp ECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 99999999999998753 69999999999999999999999 499999999999999999999999999998654332
Q ss_pred ccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccC
Q 008031 443 NVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDA 522 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (580)
. ......||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+..+ ....+...... . +
T Consensus 181 ~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~~~i~~~~~~-------~---p 246 (304)
T 3ubd_A 181 K-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---TMTMILKAKLG-------M---P 246 (304)
T ss_dssp C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCC-------C---C
T ss_pred c-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH---HHHHHHcCCCC-------C---C
Confidence 2 2334679999999999999999999999999999999999999998655433 33333322110 0 1
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 008031 523 PTIGDELLNTLKLALHCVDPSPSARPE-----VLQVVQQ 556 (580)
Q Consensus 523 ~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~ev~~~ 556 (580)
...+ .++.+++.+||+.||++||| ++|+++|
T Consensus 247 ~~~s---~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 247 QFLS---PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp TTSC---HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CcCC---HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1122 35667888999999999998 4677765
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.2e-51 Score=400.74 Aligned_cols=250 Identities=21% Similarity=0.370 Sum_probs=189.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC---------
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKG--------- 357 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--------- 357 (580)
|++.+.||+|+||.||+|.+. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+.
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 567899999999999999986 799999999865433 234578999999999999999999999875332
Q ss_pred --cEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccc
Q 008031 358 --EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLS 435 (580)
Q Consensus 358 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~ 435 (580)
..|+||||+++|+|.+++.........++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~-~~IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH-CcCccccCcHHHeEECCCCcEEEccCccc
Confidence 368999999999999999876544556777889999999999999999 49999999999999999999999999999
Q ss_pred ccccccccc-----------ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHH
Q 008031 436 RLMTAAANV-----------NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASI 504 (580)
Q Consensus 436 ~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~ 504 (580)
+........ ......||+.|||||++.+..|+.++||||+||++|||++ ||.... +....+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~~~~~~~~~ 240 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--ERVRTLTDV 240 (299)
T ss_dssp --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHHHHHH
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--HHHHHHHHH
Confidence 876543221 2234579999999999999999999999999999999996 775321 111111111
Q ss_pred hhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 505 VKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..... ++........+.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~------------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 241 RNLKF------------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HTTCC------------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hcCCC------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11110 01111223455679999999999999999999885
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-48 Score=396.98 Aligned_cols=263 Identities=23% Similarity=0.321 Sum_probs=202.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECC-----CCcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGP-----KGEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~~ 360 (580)
|.+.+.||+|+||.||+|.+. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++... .+..|
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 667899999999999999986 799999999975432 2345688999999999999999999998642 35789
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+|||||+ |+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.+..
T Consensus 136 ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 136 VVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 9999995 6899999764 4799999999999999999999995 999999999999999999999999999987643
Q ss_pred cc---ccceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccc-
Q 008031 441 AA---NVNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFD- 515 (580)
Q Consensus 441 ~~---~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 515 (580)
.. ........||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+..+.+...........+..
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence 22 2233456899999999998765 568999999999999999999999987665444444333221110000000
Q ss_pred ---------hhhhccCCCcH-----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 516 ---------LELMRDAPTIG-----DELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 516 ---------~~~~~~~~~~~-----~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.......+... ....++.+|+.+||..||++|||+.|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000000000 012356789999999999999999999987
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.4e-47 Score=383.53 Aligned_cols=195 Identities=23% Similarity=0.397 Sum_probs=165.3
Q ss_pred HhhhccccccCceEEEEEEeC----CCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE----DGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|+++ +++.||+|.+... .....+.+|+++++.+ +||||+++++++.+ +++.|+||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-~~~~~lvm 99 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK-NDHVVIAM 99 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-TTEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCEEEEEE
Confidence 667889999999999999863 4678999998654 3446788999999998 69999999999987 67899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC-CCeEEeeccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS-TNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~-~~~kl~Dfg~~~~~~~~~ 442 (580)
||+++|+|.+++. .+++.++..++.||+.||+|||++ ||+||||||+|||++.+ +.+||+|||+|+......
T Consensus 100 E~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 100 PYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp ECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred eCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 9999999999984 388999999999999999999995 99999999999999866 799999999997553321
Q ss_pred c---------------------------cceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCC
Q 008031 443 N---------------------------VNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLN 493 (580)
Q Consensus 443 ~---------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~ 493 (580)
. ......+||+.|||||++.+. .|+.++||||+||++|||++|+.||....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 1 112335799999999998765 58999999999999999999999996543
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.6e-47 Score=404.70 Aligned_cols=250 Identities=23% Similarity=0.400 Sum_probs=207.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|.+.+.||+|+||.||+|.+. +|+.||+|++........+.+.+|+++|+.++|||||++++++.+ ++..++|||||+
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~iv~E~~~ 237 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYEFMS 237 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-SSEEEEEEECCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeecC
Confidence 677899999999999999986 799999999976655556778999999999999999999999987 678999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC--CCeEEeecccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS--TNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~--~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
||+|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.... .
T Consensus 238 gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~--~ 312 (573)
T 3uto_A 238 GGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--S 312 (573)
T ss_dssp CCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--E
T ss_pred CCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--c
Confidence 99999998653 24689999999999999999999994 99999999999999854 889999999998775433 2
Q ss_pred eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 446 VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
.....||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+... .+...... ++.... +..
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~---~i~~~~~~---~~~~~~---~~~ 383 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR---NVKSCDWN---MDDSAF---SGI 383 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH---HHHTTCCC---CCSGGG---TTS
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH---HHHhCCCC---CCcccc---cCC
Confidence 345679999999999999999999999999999999999999998765433333 22222211 111111 111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..++.+||.+||+.||++|||+.|+++|
T Consensus 384 ---s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 384 ---SEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2356688899999999999999999986
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.6e-46 Score=398.89 Aligned_cols=248 Identities=22% Similarity=0.301 Sum_probs=200.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHH---HHHHHHhcCCCCcceeeeeEEECCCCcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFE---SEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~e~~~l~~l~h~niv~~~~~~~~~~~~~~l 361 (580)
|.+.+.||+|+||.||+|+.. +|+.||||++.... ......+. .++.+++.++|||||++++++.+ .+..|+
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~lyl 269 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSF 269 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEEEE
Confidence 556789999999999999986 79999999996432 12223333 34677788899999999999987 668999
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||++||+|.+++.+.+ .+++..+..++.||+.||+|||++ ||+||||||+|||++.+|++||+|||+|+.....
T Consensus 270 VmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 270 ILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 999999999999998753 699999999999999999999994 9999999999999999999999999999876543
Q ss_pred cccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 442 ANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
. ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||.+.+..+.......+..... ..
T Consensus 346 ~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~-------~~-- 413 (689)
T 3v5w_A 346 K---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-------EL-- 413 (689)
T ss_dssp C---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-------CC--
T ss_pred C---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC-------CC--
Confidence 2 234689999999999864 5799999999999999999999999987655554443333322211 00
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHHH
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPE-----VLQVVQQL 557 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~ev~~~L 557 (580)
+... ..++.+++.+||+.||.+|++ +.|+++|=
T Consensus 414 -p~~~---S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 414 -PDSF---SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp -CTTS---CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred -CccC---CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 1112 235668888999999999998 68887763
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.9e-44 Score=361.71 Aligned_cols=270 Identities=31% Similarity=0.513 Sum_probs=220.0
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
|...+.||+|+||.||+|.+.+|+.||||++........+.+.+|++++++++||||+++++++.. .+..++||||+++
T Consensus 41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~ 119 (321)
T 2qkw_B 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-RNEMILIYKYMEN 119 (321)
T ss_dssp CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-TTCCEEEEECCTT
T ss_pred cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CCeEEEEEEcCCC
Confidence 456789999999999999988899999999876655566789999999999999999999999976 6689999999999
Q ss_pred CChhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc-cce
Q 008031 369 GSLATFLHARG-PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN-VNV 446 (580)
Q Consensus 369 g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 446 (580)
|+|.+++.... ....+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||+++....... ...
T Consensus 120 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 120 GNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT-RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp CBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred CcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC-CCeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 99999997643 22358999999999999999999999 4999999999999999999999999999976543222 122
Q ss_pred eeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCCh---hHHHHHHhhhhccccccchhhhccCC
Q 008031 447 IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAEL---PQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+. ..+..............++... ..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 276 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA--DK 276 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCT--TC
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhc--cc
Confidence 234588999999999889999999999999999999999999976544433 2333222222223333333332 12
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcc
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRP 562 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~ 562 (580)
........+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 335667788899999999999999999999999998754
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8.1e-45 Score=365.27 Aligned_cols=270 Identities=37% Similarity=0.649 Sum_probs=221.9
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccc-cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITK-GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|...+.||+|+||.||+|.+.+|+.||||++...... ....+.+|+++++.++||||+++++++.. .+..++||||++
T Consensus 32 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~ 110 (326)
T 3uim_A 32 FSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-PTERLLVYPYMA 110 (326)
T ss_dssp SCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC-SSCCEEEEECCT
T ss_pred cccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec-CCceEEEEEecc
Confidence 4557889999999999999888999999998755432 33478999999999999999999999986 567899999999
Q ss_pred CCChhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHhhcCC---CcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 368 HGSLATFLHARG-PETPIDWPTRMKIIKGMTRGLLHLHSNE---NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 368 ~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~---~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
+|+|.+++.... ....+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||++........
T Consensus 111 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 189 (326)
T 3uim_A 111 NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 189 (326)
T ss_dssp TCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH-SSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSS
T ss_pred CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccc
Confidence 999999998753 23459999999999999999999999 6 999999999999999999999999999987765544
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCC-----CCCCCChhHHHHHHhhhhccccccchhh
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGE-----PLNGAELPQWVASIVKEEWTNEVFDLEL 518 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
.......||+.|+|||++.+..++.++||||+|+++|+|++|+.||. .........++.............+...
T Consensus 190 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T 3uim_A 190 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL 269 (326)
T ss_dssp CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTC
T ss_pred cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhh
Confidence 44445569999999999988899999999999999999999999995 2233344455544444444444444443
Q ss_pred hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcc
Q 008031 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRP 562 (580)
Q Consensus 519 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~ 562 (580)
. .....+....+.+++.+||+.||++|||+.|++++|+....
T Consensus 270 ~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 270 Q--GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp T--TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred c--cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 2 23445677889999999999999999999999999987543
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=365.42 Aligned_cols=250 Identities=20% Similarity=0.325 Sum_probs=196.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++..... .....+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~~~lv~E~~ 90 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-ANKIFMVLEYC 90 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEEEeCC
Confidence 567899999999999999975 899999999865432 334578999999999999999999999987 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
++|+|.+++...+ .+++..+..++.||+.||+|||+. ||+||||||+||++++++.+||+|||++...........
T Consensus 91 ~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 166 (347)
T 3zgw_A 91 PGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ-GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166 (347)
T ss_dssp TTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred CCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccc
Confidence 9999999997653 589999999999999999999994 999999999999999999999999999987655444444
Q ss_pred eeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 447 IATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+.+.. .....+..+... .....
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~---~~~~~i~~~~~~----------~p~~~ 233 (347)
T 3zgw_A 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM---ALYKKIMRGKYD----------VPKWL 233 (347)
T ss_dssp -----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHTCCC----------CCTTC
T ss_pred cccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHcCCCC----------CCCCC
Confidence 45679999999999988775 88999999999999999999999765432 333333322211 01111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~ 559 (580)
..++.+++.+||+.||++|||+.|++++-.-
T Consensus 234 ---s~~~~~li~~~L~~dP~~Rps~~eil~hp~~ 264 (347)
T 3zgw_A 234 ---SPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264 (347)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHTCHHH
T ss_pred ---CHHHHHHHHHHcccCHhHCcCHHHHhcCcch
Confidence 1255678889999999999999999987553
No 23
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.5e-45 Score=355.57 Aligned_cols=256 Identities=24% Similarity=0.420 Sum_probs=211.2
Q ss_pred HHhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
.|...+.||+|+||.||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++.+ ++..++||||++
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 88 (269)
T 4hcu_A 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFME 88 (269)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEEECCT
T ss_pred hceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCceEEEEEeCC
Confidence 356789999999999999999888999999997543 345679999999999999999999999976 568999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+++|.+++... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++............
T Consensus 89 ~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 89 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999999764 34689999999999999999999994 9999999999999999999999999999876544333333
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
...+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||......+....+. ..... . .....
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~---~~~~~---~------~~~~~- 232 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS---TGFRL---Y------KPRLA- 232 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH---TTCCC---C------CCTTS-
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh---cCccC---C------CCCcC-
Confidence 4557788999999998999999999999999999999 999998655433222221 11000 0 01111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
...+.+++.+||+.||++|||+.+++++|+++.+.
T Consensus 233 --~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 233 --STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp --CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 23567888899999999999999999999998765
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.5e-44 Score=353.97 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=205.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|...+.||+|+||.||+|.+. +|+.||||++........+.+.+|+.++++++||||+++++++.. .+..++||||++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~ 100 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLA 100 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-CCEEEEEEECCC
Confidence 566789999999999999975 799999999976666667788999999999999999999999986 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+|+|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++........ ...
T Consensus 101 ~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 174 (297)
T 3fxz_A 101 GGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRS 174 (297)
T ss_dssp TCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CBC
T ss_pred CCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-ccC
Confidence 99999999864 489999999999999999999994 999999999999999999999999999886654332 233
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+ ....+........ .....
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~----------~~~~~ 241 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---ALYLIATNGTPEL----------QNPEK 241 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHHHHCSCCC----------SCGGG
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCCCC----------CCccc
Confidence 4579999999999999999999999999999999999999997654322 2222222111110 00111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
....+.+++.+||+.||++|||+.|++++-
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 123567889999999999999999999864
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-44 Score=360.80 Aligned_cols=261 Identities=31% Similarity=0.446 Sum_probs=200.1
Q ss_pred HHhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
.|.+.+.||+|+||.||+|.+. |+.||||++..... ...+.+.+|++++++++||||+++++++.. .+..++||||
T Consensus 38 ~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~ 115 (309)
T 3p86_A 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-PPNLSIVTEY 115 (309)
T ss_dssp GEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-TTCCEEEEEC
T ss_pred HceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCceEEEEec
Confidence 3567889999999999999874 88999999875432 233568899999999999999999999976 5679999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN--IIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~--i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
+++|+|.+++...+....+++..+..++.|++.||+|||+. | |+||||||+||+++.++.+||+|||+++......
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~- 193 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF- 193 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC----------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc-
Confidence 99999999998754333489999999999999999999994 8 9999999999999999999999999997554332
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+....+. ...... .. ..
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~---~~~~~~-----~~---~~ 262 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG---FKCKRL-----EI---PR 262 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH---HSCCCC-----CC---CT
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCCCC-----CC---Cc
Confidence 22234568999999999999999999999999999999999999998765433222221 111000 00 11
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccccc
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAAT 566 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~ 566 (580)
.. ..++.+++.+||+.||++|||+.++++.|+.+......
T Consensus 263 ~~---~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 263 NL---NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred cC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 11 23567888899999999999999999999998766443
No 26
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-44 Score=358.79 Aligned_cols=258 Identities=25% Similarity=0.436 Sum_probs=209.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|...+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+ ++..++||||++
T Consensus 12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~ 90 (310)
T 3s95_A 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIK 90 (310)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred eeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-CCeeEEEEEecC
Confidence 456789999999999999986 789999999876555566789999999999999999999999986 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccc--
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVN-- 445 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-- 445 (580)
+|+|.+++... ...+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.........
T Consensus 91 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 91 GGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99999999874 24689999999999999999999994 99999999999999999999999999998664332211
Q ss_pred -----------eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChh--HHHHHHhhhhcccc
Q 008031 446 -----------VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP--QWVASIVKEEWTNE 512 (580)
Q Consensus 446 -----------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~ 512 (580)
.....||+.|+|||.+.+..++.++||||||+++|||++|..||......... ..........
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 243 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY---- 243 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT----
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc----
Confidence 11456999999999999999999999999999999999999998764332211 1111111110
Q ss_pred ccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
.....+ ..+.+++.+||+.||++|||+.++++.|++++....
T Consensus 244 -----~~~~~~------~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 244 -----CPPNCP------PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp -----CCTTCC------TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 001111 256688899999999999999999999999976543
No 27
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.6e-44 Score=367.28 Aligned_cols=259 Identities=26% Similarity=0.388 Sum_probs=209.0
Q ss_pred HHhhhccccccCceEEEEEEeC--------CCCEEEEEEcccccc-ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE--------DGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKG 357 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 357 (580)
.|.+.+.||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+.+++++ +||||+++++++.. .+
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~~ 160 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DG 160 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-SS
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-CC
Confidence 4567889999999999999862 355799999976533 2345789999999999 89999999999976 66
Q ss_pred cEEEEEeeCCCCChhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC
Q 008031 358 EKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS 424 (580)
Q Consensus 358 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~ 424 (580)
..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. ||+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchhhEEECCC
Confidence 89999999999999999987532 24589999999999999999999994 99999999999999999
Q ss_pred CCeEEeecccccccccccc-cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHH
Q 008031 425 TNAKISDFGLSRLMTAAAN-VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVA 502 (580)
Q Consensus 425 ~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~ 502 (580)
+.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+..+....+.
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 319 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 319 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Confidence 9999999999986644322 12223456788999999999999999999999999999999 999998765544333222
Q ss_pred HHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 503 SIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
. .... ..... ...++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 320 ~----~~~~--------~~~~~---~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 320 E----GHRM--------DKPAN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp T----TCCC--------CCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----CCCC--------CCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1 1110 00111 123567888899999999999999999999998653
No 28
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.1e-44 Score=358.52 Aligned_cols=247 Identities=25% Similarity=0.346 Sum_probs=202.8
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+++++.++||||+++++++.. .+..++||||
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~e~ 95 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-EKTLYLIMEY 95 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEEEEC
Confidence 566799999999999999984 899999999865432 234568899999999999999999999986 6689999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
+++|+|.+++...+ .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++........
T Consensus 96 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-- 169 (328)
T 3fe3_A 96 ASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-- 169 (328)
T ss_dssp CTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG--
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc--
Confidence 99999999997753 589999999999999999999995 999999999999999999999999999986644322
Q ss_pred eeeecCccccCCccccccCCCC-CcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 446 VIATAGALGYRAPELSKLKKAN-TKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
.....||+.|+|||++.+..++ .++||||+||++|+|++|+.||.+.+..+ ....+..+... .+..
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~----------~p~~ 236 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLRGKYR----------IPFY 236 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCC----------CCTT
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCC----------CCCC
Confidence 2335699999999999888775 78999999999999999999998655332 22222222111 0111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
...++.+++.+||+.||.+|||+.|++++-.
T Consensus 237 ---~s~~~~~li~~~L~~dP~~R~t~~eil~h~~ 267 (328)
T 3fe3_A 237 ---MSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267 (328)
T ss_dssp ---SCHHHHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred ---CCHHHHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence 1235668888999999999999999998743
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.6e-44 Score=351.06 Aligned_cols=257 Identities=23% Similarity=0.392 Sum_probs=210.8
Q ss_pred HHhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
.|...+.||+|+||.||+|.+.++..||+|+++... ...+++.+|++++++++||||+++++++.. .+..++||||++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 86 (268)
T 3sxs_A 9 EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-EYPIYIVTEYIS 86 (268)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEECCT
T ss_pred heeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCceEEEEEccC
Confidence 356778999999999999999988899999997543 245678999999999999999999999976 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+++|.+++...+ ..+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||++............
T Consensus 87 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 163 (268)
T 3sxs_A 87 NGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLES-HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163 (268)
T ss_dssp TCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHH-TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred CCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence 999999997652 358999999999999999999999 59999999999999999999999999999876555444444
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
...+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||......+....+ ...... . .....
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~~~~~---~------~~~~~- 230 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV---SQGHRL---Y------RPHLA- 230 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---HTTCCC---C------CCTTS-
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH---HcCCCC---C------CCCcC-
Confidence 4567778999999998899999999999999999999 99999765533322221 111100 0 01111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
...+.+++.+||+.||++|||+.|++++|+.++++.
T Consensus 231 --~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 231 --SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp --CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred --hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 125678888999999999999999999999998754
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.6e-44 Score=359.92 Aligned_cols=259 Identities=26% Similarity=0.426 Sum_probs=206.7
Q ss_pred HHhhhccccccCceEEEEEEeC----CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE----DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
.|.+.+.||+|+||.||+|.+. .+..||||+++.... ...+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 128 (325)
T 3kul_A 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-GRLAMIV 128 (325)
T ss_dssp GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-GGCCEEE
T ss_pred HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCccEEE
Confidence 4667899999999999999985 344699999976533 334678999999999999999999999976 5678999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++|+|.++++.. ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSD-LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999754 2468999999999999999999999 499999999999999999999999999998765433
Q ss_pred ccc--eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 443 NVN--VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 443 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+.. ....
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~---~~~~--------- 273 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE---GYRL--------- 273 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT---TCCC---------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc---CCCC---------
Confidence 222 222346778999999998999999999999999999999 9999977654333322221 1100
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
+........+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus 274 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 274 ---PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred ---CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0011122356788899999999999999999999999875543
No 31
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.5e-44 Score=354.14 Aligned_cols=257 Identities=20% Similarity=0.359 Sum_probs=208.7
Q ss_pred HHhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
.|.+.+.||+|+||.||+|.+.++..||+|+++... ...+++.+|++++++++||||+++++++.. .+..++||||++
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 102 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMA 102 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEECCCT
T ss_pred HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEec-CCCeEEEEeccC
Confidence 456789999999999999999988899999997543 245678999999999999999999999976 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+++|.+++... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++............
T Consensus 103 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 103 NGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH-CCccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 99999999763 2358999999999999999999999 49999999999999999999999999999876544333333
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
...+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||...+..+....+.. .... . .....
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~---~~~~---~------~~~~~- 246 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ---GLRL---Y------RPHLA- 246 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT---TCCC---C------CCTTC-
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhc---ccCC---C------CCCcC-
Confidence 4557788999999998899999999999999999998 9999987654333332221 1100 0 01111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
...+.+++.+||+.||++|||+.+++++|+++.++.
T Consensus 247 --~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 247 --SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp --CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 135678889999999999999999999999987653
No 32
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.5e-44 Score=360.85 Aligned_cols=267 Identities=24% Similarity=0.303 Sum_probs=205.5
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCC---CcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPK---GEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~~lv~e~ 365 (580)
|...+.||+|+||.||+|.+. ++.||||++.... .....+.+|+.++++++||||+++++++.... ...++||||
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 26 LQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred chhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 567899999999999999887 8999999986542 23345677999999999999999999998633 237999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC----------CcccCCCCCCCeeeCCCCCeEEeecccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE----------NIIHGNLTSSNVLLDDSTNAKISDFGLS 435 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~----------~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~ 435 (580)
+++|+|.++++.. .+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~-~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 104 HEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHE-DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp CTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTC-CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHh-hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 9999999999864 48999999999999999999998 6 9999999999999999999999999999
Q ss_pred ccccccccc-ceeeecCccccCCcccccc-----CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhh--
Q 008031 436 RLMTAAANV-NVIATAGALGYRAPELSKL-----KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE-- 507 (580)
Q Consensus 436 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-- 507 (580)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+........+.......
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 866543322 2223568999999999876 35566889999999999999999999875443322221110000
Q ss_pred ------hccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 508 ------EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 508 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
........+.... .........++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 259 LEDMQEVVVHKKKRPVLRD-YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHTTSCCCCCCCG-GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCccc-cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0000000000000 001123445688999999999999999999999999998754
No 33
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-43 Score=349.85 Aligned_cols=270 Identities=20% Similarity=0.303 Sum_probs=212.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc-cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC-cEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI-TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKG-EKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~lv~e~ 365 (580)
|.+.+.||+|+||.||+|.+. +|+.||||+++... ....+.+.+|++++++++||||+++++++..... ..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 456789999999999999987 69999999997543 2345678899999999999999999999986433 67999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee----CCCCCeEEeecccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL----DDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~----~~~~~~kl~Dfg~~~~~~~~ 441 (580)
+++++|.+++........+++..+..++.||+.||+|||+. ||+||||||+||++ +.++.+||+|||+++.....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 99999999998765455599999999999999999999994 99999999999999 77788999999999876543
Q ss_pred cccceeeecCccccCCccccc--------cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCC-hhHHHHHHhhhhcccc
Q 008031 442 ANVNVIATAGALGYRAPELSK--------LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE-LPQWVASIVKEEWTNE 512 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 512 (580)
... ....||..|+|||++. +..++.++|||||||++|||++|+.||.+..... ....+..+..+.....
T Consensus 170 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 170 EQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp CCB--CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred Cce--eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 322 2356899999999876 5788999999999999999999999997654432 2333333333222110
Q ss_pred cc------------chhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhc
Q 008031 513 VF------------DLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561 (580)
Q Consensus 513 ~~------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~ 561 (580)
+. .................+.+++.+||+.||++|||+.|++++..+-.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 00 00111111223345566778999999999999999999999998643
No 34
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.2e-43 Score=369.80 Aligned_cols=252 Identities=27% Similarity=0.449 Sum_probs=208.7
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
|.+.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|++++++++||||+++++++...++..++||||+++
T Consensus 195 ~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~ 271 (450)
T 1k9a_A 195 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 271 (450)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred eEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCC
Confidence 456789999999999999987 7899999997543 4567999999999999999999999998756679999999999
Q ss_pred CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccceee
Q 008031 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIA 448 (580)
Q Consensus 369 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 448 (580)
|+|.++++..+ ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 272 g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~~ 345 (450)
T 1k9a_A 272 GSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DT 345 (450)
T ss_dssp CBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc----cC
Confidence 99999998753 23478999999999999999999995 99999999999999999999999999998543221 12
Q ss_pred ecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 449 TAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 449 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
..+++.|+|||.+.+..++.++|||||||++|||++ |+.||...+..+....+.. +... ......
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~----~~~~--------~~p~~~-- 411 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----GYKM--------DAPDGC-- 411 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT----TCCC--------CCCTTC--
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----CCCC--------CCCCcC--
Confidence 357889999999999999999999999999999999 9999988776665544332 1110 011112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
..++.++|.+||+.||++|||+.++++.|+.+....
T Consensus 412 -~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 412 -PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 235667888999999999999999999999987553
No 35
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.7e-44 Score=374.42 Aligned_cols=255 Identities=22% Similarity=0.396 Sum_probs=209.6
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 190 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--~~~~~lv~e~~~~ 266 (454)
T 1qcf_A 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT--KEPIYIITEFMAK 266 (454)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEECCCTT
T ss_pred eEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe--CCccEEEEeecCC
Confidence 55678999999999999999888999999997543 35678999999999999999999999985 4578999999999
Q ss_pred CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccceee
Q 008031 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIA 448 (580)
Q Consensus 369 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 448 (580)
|+|.++++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++............
T Consensus 267 g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 267 GSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp CBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred CcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 99999997532 22578899999999999999999994 99999999999999999999999999998765433322333
Q ss_pred ecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 449 TAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 449 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
..++..|+|||++....++.++|||||||++|||++ |+.||.+.+..+....+. .+... ......
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~---~~~~~---------~~~~~~-- 410 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE---RGYRM---------PRPENC-- 410 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH---HTCCC---------CCCTTS--
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---cCCCC---------CCCCCC--
Confidence 456788999999998999999999999999999999 999998765443333222 11110 011112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
..++.++|.+||+.||++|||+.++++.|+++...
T Consensus 411 -~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 411 -PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred -CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 23567888999999999999999999999998654
No 36
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.4e-43 Score=356.75 Aligned_cols=249 Identities=23% Similarity=0.374 Sum_probs=203.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc------cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK------GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~l 361 (580)
|.+.+.||+|+||.||+|... +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+ .+..++
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~l 92 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTDVVL 92 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-CCEEEE
Confidence 567899999999999999986 7999999998754322 34678999999999999999999999987 668999
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC----CeEEeecccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST----NAKISDFGLSRL 437 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~----~~kl~Dfg~~~~ 437 (580)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++ .+||+|||++..
T Consensus 93 v~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 93 ILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 99999999999999764 3689999999999999999999995 999999999999998776 799999999987
Q ss_pred cccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchh
Q 008031 438 MTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517 (580)
Q Consensus 438 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (580)
...... .....||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+... .+..... .++..
T Consensus 169 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~---~i~~~~~---~~~~~ 240 (361)
T 2yab_A 169 IEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---NITAVSY---DFDEE 240 (361)
T ss_dssp CCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH---HHHTTCC---CCCHH
T ss_pred cCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHhcCC---CCCch
Confidence 654322 234569999999999999999999999999999999999999997754333222 2222111 11111
Q ss_pred hhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 518 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.+.. . ...+.+++.+||..||++|||+.|+++|
T Consensus 241 ~~~~---~---s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 241 FFSQ---T---SELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHTT---S---CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hccC---C---CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111 1 1356688889999999999999999875
No 37
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=9.9e-44 Score=363.20 Aligned_cols=258 Identities=24% Similarity=0.453 Sum_probs=196.6
Q ss_pred HHhhhccccccCceEEEEEEeC----CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE----DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
.|.+.+.||+|+||.||+|.+. ++..||||.++.... ...+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 124 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIV 124 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCceEEE
Confidence 3566789999999999999875 577899999975433 334679999999999999999999999976 5689999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++|+|.++++.. ...+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999864 34689999999999999999999994 99999999999999999999999999998765432
Q ss_pred ccc--eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 443 NVN--VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 443 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+....+. . ...
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~---~-~~~--------- 268 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---E-GYR--------- 268 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH---T-TEE---------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---c-CCC---------
Confidence 221 122345678999999999999999999999999999998 999997665433222221 1 111
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
.+........+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 269 --~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 --LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp --CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred --CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0001112235778899999999999999999999999986543
No 38
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.7e-43 Score=348.54 Aligned_cols=262 Identities=20% Similarity=0.346 Sum_probs=204.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc---cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK---GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.. ++..++|||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 91 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-DDCYYLVME 91 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-SSEEEEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-CCeEEEEEe
Confidence 567899999999999999976 7899999998543322 23568899999999999999999999986 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++++|.+++...+ .+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.........
T Consensus 92 ~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 92 YIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHD-MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp CCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred CCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 999999999998753 68999999999999999999999 49999999999999999999999999999876554444
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||......+ ........... . ......+.
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~---~~~~~~~~~~~----~-~~~~~~~~ 239 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS---IAIKHIQDSVP----N-VTTDVRKD 239 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH---HHHHHHSSCCC----C-HHHHSCTT
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHhhccCC----C-cchhcccC
Confidence 4444578999999999999999999999999999999999999997654221 11111111110 0 00001111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHhhhcccccc
Q 008031 525 IGDELLNTLKLALHCVDPSPSARP-EVLQVVQQLEEIRPEAAT 566 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rp-s~~ev~~~L~~~~~~~~~ 566 (580)
.+ ..+.+++.+||+.||++|| ++.++.+.|+.+..+...
T Consensus 240 ~~---~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 240 IP---QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp SC---HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred CC---HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 22 3566788899999999998 999999999998765543
No 39
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.7e-43 Score=353.22 Aligned_cols=246 Identities=23% Similarity=0.318 Sum_probs=202.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|...+.||+|+||.||+|... +|+.||+|+++... ......+.+|+++++.++||||+++++++.. .+..++|||
T Consensus 7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv~E 85 (337)
T 1o6l_A 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVME 85 (337)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-CCEEEEEEe
Confidence 456789999999999999986 79999999997542 2345678899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++...... .
T Consensus 86 ~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~ 160 (337)
T 1o6l_A 86 YANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-A 160 (337)
T ss_dssp CCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-C
T ss_pred CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-C
Confidence 99999999999864 3689999999999999999999995 99999999999999999999999999997543222 2
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+ ....+...... . ...
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~i~~~~~~-------~---p~~ 227 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LFELILMEEIR-------F---PRT 227 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCC-------C---CTT
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH---HHHHHHcCCCC-------C---CCC
Confidence 2334568999999999999999999999999999999999999997654322 22222221110 0 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARP-----EVLQVVQQ 556 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rp-----s~~ev~~~ 556 (580)
. ..++.+++.+||+.||++|| ++.|+++|
T Consensus 228 ~---s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 228 L---SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp S---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C---CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1 23566788899999999999 89999887
No 40
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.4e-44 Score=367.66 Aligned_cols=256 Identities=25% Similarity=0.402 Sum_probs=206.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc-cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK-GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|...+.||+|+||.||+|.+. +++.||||.++..... ....+.+|++++++++||||+++++++.. ++..++||||+
T Consensus 116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~ 194 (377)
T 3cbl_A 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVMELV 194 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-SSSCEEEEECC
T ss_pred eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-CCCcEEEEEcC
Confidence 556789999999999999987 7899999998754332 23468899999999999999999999976 56899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
++|+|.++++..+ ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++..........
T Consensus 195 ~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 195 QGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp TTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 9999999998642 3589999999999999999999994 999999999999999999999999999976433221111
Q ss_pred -eeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 447 -IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 447 -~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
....++..|+|||.+.+..++.++|||||||++|||++ |..||......+....+. ..... .....
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~----~~~~~--------~~~~~ 339 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE----KGGRL--------PCPEL 339 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH----TTCCC--------CCCTT
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----cCCCC--------CCCCC
Confidence 11234678999999998899999999999999999999 999998765433322221 11110 01111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
.+ .++.+++.+||+.||++|||+.++++.|++++.+
T Consensus 340 ~~---~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 340 CP---DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 22 3566788899999999999999999999998654
No 41
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-44 Score=364.67 Aligned_cols=264 Identities=22% Similarity=0.342 Sum_probs=209.1
Q ss_pred HhhhccccccCceEEEEEEeC------CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE------DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++.... .....+.+|+.++++++||||+++++++.. ....++
T Consensus 73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~l 151 (367)
T 3l9p_A 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPRFI 151 (367)
T ss_dssp EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEE
T ss_pred eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCCCEE
Confidence 566789999999999999853 467899999975433 344578899999999999999999999976 567899
Q ss_pred EEeeCCCCChhhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC---CeEEeeccc
Q 008031 362 VFDYMPHGSLATFLHARG----PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST---NAKISDFGL 434 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~---~~kl~Dfg~ 434 (580)
||||+++|+|.+++.... ....+++.+++.++.||+.||+|||+. ||+||||||+|||++.++ .+||+|||+
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 999999999999998653 224589999999999999999999994 999999999999999554 599999999
Q ss_pred ccccccccc-cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhcccc
Q 008031 435 SRLMTAAAN-VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512 (580)
Q Consensus 435 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (580)
++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+....+. ......
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~---~~~~~~- 306 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT---SGGRMD- 306 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH---TTCCCC-
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---cCCCCC-
Confidence 976533222 22233457889999999999999999999999999999998 999997755433332222 111100
Q ss_pred ccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccC
Q 008031 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAAT 569 (580)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~ 569 (580)
..... ...+.+++.+||+.||++|||+.+++++|+.+.........
T Consensus 307 --------~~~~~---~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~~~~ 352 (367)
T 3l9p_A 307 --------PPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 352 (367)
T ss_dssp --------CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHHTC
T ss_pred --------CCccC---CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhhccC
Confidence 01111 22566888999999999999999999999998766544333
No 42
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.7e-43 Score=351.19 Aligned_cols=251 Identities=18% Similarity=0.270 Sum_probs=205.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
+...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||+++++++.. .+..++||||++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~ 125 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-GEELWVLMEFLQ 125 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEECCCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEE-CCEEEEEEecCC
Confidence 344568999999999999987 799999999976666666789999999999999999999999987 568999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+++|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++........ ...
T Consensus 126 ~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~ 199 (321)
T 2c30_A 126 GGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRK 199 (321)
T ss_dssp SCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBC
T ss_pred CCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-ccc
Confidence 99999998753 589999999999999999999995 999999999999999999999999999986654322 223
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
...||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+...... .. .....
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~-~~---------~~~~~ 266 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ---AMKRLRDSPPP-KL---------KNSHK 266 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHHHSSCC-CC---------TTGGG
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhcCCCC-Cc---------Ccccc
Confidence 4579999999999999999999999999999999999999997654322 22222211110 00 00011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~ 559 (580)
....+.+++.+||+.||++|||+.|++++-.-
T Consensus 267 ~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~ 298 (321)
T 2c30_A 267 VSPVLRDFLERMLVRDPQERATAQELLDHPFL 298 (321)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 12356788889999999999999999987543
No 43
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.5e-43 Score=375.22 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=211.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|.+.+.||+|+||.||+|.+. ++..||||.++... ...+.|.+|+.++++++||||++++++|.. .+..++||||++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~E~~~ 299 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMT 299 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECCT
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEec-CCcEEEEEEccC
Confidence 566789999999999999987 48899999997543 346789999999999999999999999976 568999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+|+|.++++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...........
T Consensus 300 ~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 300 YGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 999999998753 34589999999999999999999994 9999999999999999999999999999876543333333
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
...+++.|+|||++.+..++.++|||||||++|||++ |..||...+..+..+.+.. .... ......
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~--------~~~~~~- 444 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----DYRM--------ERPEGC- 444 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT----TCCC--------CCCTTC-
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----CCCC--------CCCCCC-
Confidence 3456788999999998999999999999999999999 9999987665444333221 1110 011112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
..++.++|.+||+.||++|||+.++++.|+.+..+.
T Consensus 445 --~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 445 --PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp --CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred --CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 235667888999999999999999999999986543
No 44
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.1e-43 Score=349.33 Aligned_cols=261 Identities=27% Similarity=0.418 Sum_probs=201.8
Q ss_pred HHhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
.|.+.+.||+|+||.||+|.+. ..+|+|+++.... ...+.+.+|+.++++++||||+++++++. .+..++||||
T Consensus 37 ~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e~ 112 (307)
T 3lb7_A 37 EVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--KDNLAIVTQW 112 (307)
T ss_dssp SCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEEC
T ss_pred ceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc--cCcEEEEEec
Confidence 3566789999999999999875 3689998875332 23467899999999999999999999875 4568999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc-ccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA-ANV 444 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 444 (580)
+++++|.+++... ...+++.++..++.||+.||+|||+. ||+||||||+||++++++.+||+|||++...... ...
T Consensus 113 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 113 CEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred CCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999999999754 35689999999999999999999994 9999999999999999999999999999865432 222
Q ss_pred ceeeecCccccCCccccc---cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 445 NVIATAGALGYRAPELSK---LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
......||+.|+|||++. +..++.++|||||||++|||++|+.||...+..+... ........ .+.....
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~---~~~~~~~~----~~~~~~~ 262 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII---FMVGRGYA----SPDLSKL 262 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH---HHHHHTCC----CCCSTTS
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH---HHHhcCCC----Ccchhhh
Confidence 333457999999999875 6678889999999999999999999998665433221 11111111 1111111
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
....+ ..+.+++.+||+.+|++|||+.|++++|+.+....+
T Consensus 263 ~~~~~---~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 263 YKNCP---KAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp CSSSC---HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hcCCc---HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 11122 356688889999999999999999999999876543
No 45
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2e-43 Score=370.40 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=203.4
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||+++
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv~e~~~~ 262 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSK 262 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTT
T ss_pred ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEEehhhcC
Confidence 55678999999999999999888889999997543 345689999999999999999999999864 578999999999
Q ss_pred CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccceee
Q 008031 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIA 448 (580)
Q Consensus 369 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 448 (580)
|+|.++++... ...+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++............
T Consensus 263 gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 263 GSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp CBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 99999997532 23589999999999999999999994 99999999999999999999999999998765443333334
Q ss_pred ecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 449 TAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 449 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||.+....+....+. .+ .. ....+..
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~---~~-~~--------~~~~~~~-- 406 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE---RG-YR--------MPCPPEC-- 406 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---TT-CC--------CCCCTTS--
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---cC-CC--------CCCCCCC--
Confidence 557889999999998999999999999999999999 999998765433332221 11 11 0011112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
...+.++|.+||+.||++|||+.++++.|+.+....
T Consensus 407 -~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 407 -PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred -CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 235668889999999999999999999999986543
No 46
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-43 Score=361.82 Aligned_cols=263 Identities=25% Similarity=0.373 Sum_probs=210.7
Q ss_pred HHhhhccccccCceEEEEEEeC--------CCCEEEEEEcccccc-ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE--------DGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKG 357 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 357 (580)
.|.+.+.||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++.. ++
T Consensus 70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~~ 148 (382)
T 3tt0_A 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DG 148 (382)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-CC
Confidence 4667899999999999999863 235799999976533 2346789999999999 99999999999976 66
Q ss_pred cEEEEEeeCCCCChhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC
Q 008031 358 EKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS 424 (580)
Q Consensus 358 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~ 424 (580)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCcceEEEcCC
Confidence 89999999999999999987532 24589999999999999999999994 99999999999999999
Q ss_pred CCeEEeecccccccccccc-cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHH
Q 008031 425 TNAKISDFGLSRLMTAAAN-VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVA 502 (580)
Q Consensus 425 ~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~ 502 (580)
+.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+..+....+.
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 307 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 9999999999986654322 22223457889999999999999999999999999999999 999997655333322222
Q ss_pred HHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccc
Q 008031 503 SIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATA 567 (580)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~ 567 (580)
...... ..... ..++.+++.+||+.||++|||+.|++++|+++.......
T Consensus 308 ---~~~~~~---------~~~~~---~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 308 ---EGHRMD---------KPSNC---TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp ---TTCCCC---------CCSSC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred ---cCCCCC---------CCccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 111100 01111 235678888999999999999999999999987554433
No 47
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-43 Score=350.60 Aligned_cols=251 Identities=23% Similarity=0.336 Sum_probs=204.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|.+.+.||+|+||.||+|.+. +++.||+|.++.. ......+.+|+.+++.++||||+++++++.+ .+..++||||++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~~~ 84 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFEFIS 84 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEECCCC
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEec-CCEEEEEEEeCC
Confidence 556789999999999999986 6889999998644 2344568899999999999999999999986 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC--CCCeEEeecccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD--STNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
+|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+||+++. ++.+||+|||++....... .
T Consensus 85 g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--~ 159 (321)
T 1tki_A 85 GLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--N 159 (321)
T ss_dssp CCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--E
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--c
Confidence 99999999764 24689999999999999999999995 9999999999999986 7899999999998765433 2
Q ss_pred eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 446 VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
.....||+.|+|||++.+..++.++||||+||++|+|++|..||...+..+ .+..+...... .+..... ..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~---~~~~~~~---~~ 230 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---IIENIMNAEYT---FDEEAFK---EI 230 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHHTCCC---CCHHHHT---TS
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH---HHHHHHcCCCC---CChhhhc---cC
Confidence 334568999999999998889999999999999999999999997654332 22332222211 1111111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
..++.+++.+||+.||++|||+.|++++-.
T Consensus 231 ---s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 231 ---SIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 235678899999999999999999999764
No 48
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.9e-43 Score=353.91 Aligned_cols=257 Identities=23% Similarity=0.408 Sum_probs=202.1
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCE----EEEEEccccc-cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQ----VAVKRLREKI-TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~l 361 (580)
.|...+.||+|+||.||+|.+. +++. ||+|.++... ....+.+.+|+.++++++||||+++++++.. +..++
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 93 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQL 93 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES--SSEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEE
Confidence 3567799999999999999975 4443 5888876443 2445779999999999999999999999986 35889
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
|+||+++|+|.+++.... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 999999999999998753 4689999999999999999999995 9999999999999999999999999999876543
Q ss_pred ccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 442 ANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 442 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...+..+....+... ...
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~---~~~--------- 238 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---ERL--------- 238 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---CCC---------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcC---CCC---------
Confidence 322 2233457889999999999999999999999999999999 99999876655444333221 100
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
...+ .....+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 239 ~~~~---~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 239 PQPP---ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp CCCT---TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred CCCc---cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 0011 12235778889999999999999999999999986543
No 49
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.9e-43 Score=352.54 Aligned_cols=270 Identities=25% Similarity=0.413 Sum_probs=196.5
Q ss_pred HHhhhccccccCceEEEEEEeCC-CC---EEEEEEccccc--cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCc---
Q 008031 288 LCATAEIMGKSTYGTVYKATLED-GS---QVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGE--- 358 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~-~~---~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 358 (580)
.|.+.+.||+|+||.||+|.+.. +. .||||+++... ....+.+.+|++++++++||||+++++++......
T Consensus 24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 46778999999999999998763 32 79999997543 23456789999999999999999999999863321
Q ss_pred --EEEEEeeCCCCChhhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecc
Q 008031 359 --KLLVFDYMPHGSLATFLHARG---PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFG 433 (580)
Q Consensus 359 --~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg 433 (580)
.++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS-RNFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc-CCcccCCCCcceEEEcCCCCEEEeecc
Confidence 389999999999999996542 12258999999999999999999999 499999999999999999999999999
Q ss_pred ccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccc
Q 008031 434 LSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTN 511 (580)
Q Consensus 434 ~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (580)
+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...+..+....+.. ....
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~---~~~~- 258 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG---GNRL- 258 (323)
T ss_dssp C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT---TCCC-
T ss_pred ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc---CCCC-
Confidence 99866443322 2223456788999999999999999999999999999999 9999987665444333221 1110
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccCCCCC
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAATSSGD 573 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~~~~~ 573 (580)
...+. ....+.+++.+||+.||++|||+.++++.|+++........++..+
T Consensus 259 --------~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~p 309 (323)
T 3qup_A 259 --------KQPPE---CMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDP 309 (323)
T ss_dssp --------CCCTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----------
T ss_pred --------CCCCc---cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCC
Confidence 01111 1235678889999999999999999999999998776555544443
No 50
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.6e-42 Score=343.89 Aligned_cols=264 Identities=30% Similarity=0.515 Sum_probs=211.1
Q ss_pred hccccccCceEEEEEEeCCCCEEEEEEccccc----cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKI----TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
.+.||+|+||.||+|.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.. .+..++||||++
T Consensus 36 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 113 (307)
T 2nru_A 36 GNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD-GDDLCLVYVYMP 113 (307)
T ss_dssp CCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECCT
T ss_pred CCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec-CCceEEEEEecC
Confidence 37899999999999987 48899999986532 2234678999999999999999999999976 568999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc-ce
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV-NV 446 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~ 446 (580)
+|+|.+++........+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||++......... ..
T Consensus 114 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 192 (307)
T 2nru_A 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE-NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192 (307)
T ss_dssp TCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred CCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence 99999999865445679999999999999999999999 49999999999999999999999999999866443222 12
Q ss_pred eeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhc--cccccchhhhccCCC
Q 008031 447 IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW--TNEVFDLELMRDAPT 524 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 524 (580)
....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||...........+........ .....+... ...
T Consensus 193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 268 (307)
T 2nru_A 193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM---NDA 268 (307)
T ss_dssp SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC---SCC
T ss_pred cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc---ccc
Confidence 23468999999998874 588999999999999999999999987665554443333222111 111112111 122
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcc
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRP 562 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~ 562 (580)
.......+.+++.+||+.||.+|||+.+++++|+++..
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 34556678899999999999999999999999999864
No 51
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=348.90 Aligned_cols=252 Identities=26% Similarity=0.379 Sum_probs=204.3
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc------cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK------GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEK 359 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 359 (580)
..|.+.+.||+|+||.||+|... +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.. ....
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 89 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KTDV 89 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEE
Confidence 34778899999999999999986 7999999998654321 35678999999999999999999999987 6689
Q ss_pred EEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC----CeEEeecccc
Q 008031 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST----NAKISDFGLS 435 (580)
Q Consensus 360 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~----~~kl~Dfg~~ 435 (580)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999999764 4689999999999999999999994 999999999999999877 7999999999
Q ss_pred cccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccc
Q 008031 436 RLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFD 515 (580)
Q Consensus 436 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (580)
+....... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||......+....+. .... ...
T Consensus 166 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~---~~~~---~~~ 237 (326)
T 2y0a_A 166 HKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS---AVNY---EFE 237 (326)
T ss_dssp EECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---HTCC---CCC
T ss_pred eECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH---hcCC---CcC
Confidence 87643322 233569999999999999999999999999999999999999997654332222221 1111 011
Q ss_pred hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 516 LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 516 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
...... . ...+.+++.+||+.||++|||+.|++++-
T Consensus 238 ~~~~~~---~---~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 238 DEYFSN---T---SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp HHHHTT---S---CHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred cccccc---C---CHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 111111 1 13566888999999999999999999863
No 52
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.9e-43 Score=343.45 Aligned_cols=255 Identities=24% Similarity=0.420 Sum_probs=209.2
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
|...+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.. ++..++||||+++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVTEFMEH 87 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSCEEEECCCTT
T ss_pred eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCeEEEEeCCCC
Confidence 566789999999999999998888999999976533 34678999999999999999999999976 5689999999999
Q ss_pred CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccceee
Q 008031 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIA 448 (580)
Q Consensus 369 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 448 (580)
++|.+++... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.............
T Consensus 88 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 88 GCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9999999865 24689999999999999999999994 99999999999999999999999999998664433222233
Q ss_pred ecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 449 TAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 449 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
..++..|+|||.+.+..++.++||||+|+++|+|++ |+.||......+... .+...... . .....
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~---~i~~~~~~---~------~~~~~-- 230 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE---DISTGFRL---Y------KPRLA-- 230 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH---HHHTTCCC---C------CCTTS--
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHH---HHhcCCcC---C------CCccC--
Confidence 457788999999998899999999999999999999 899997654332222 22111100 0 01111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
...+.+++.+||+.||++|||+.+++++|+++.+.
T Consensus 231 -~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 231 -STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -cHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 23566888899999999999999999999998764
No 53
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.3e-43 Score=348.26 Aligned_cols=262 Identities=26% Similarity=0.362 Sum_probs=203.4
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|.+.+.||+|+||.||+|.+.+|+.||+|++...... ....+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~ 101 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-ERCLTLVFEFM 101 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-SSCEEEEEECC
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-CCEEEEEEcCC
Confidence 5567999999999999999988999999998654322 24578899999999999999999999976 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
++ +|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....... ..
T Consensus 102 ~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~ 176 (311)
T 3niz_A 102 EK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SY 176 (311)
T ss_dssp SE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---
T ss_pred CC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-cc
Confidence 74 888888764 34589999999999999999999994 999999999999999999999999999987643322 22
Q ss_pred eeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccch---hhhcc-
Q 008031 447 IATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL---ELMRD- 521 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~- 521 (580)
....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+....+...........+... .....
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 33568999999998875 56899999999999999999999999887777666655544332211111000 00000
Q ss_pred -----CCC-----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 522 -----APT-----IGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 522 -----~~~-----~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
... .+....++.+++.+||+.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 00112356789999999999999999999985
No 54
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=356.82 Aligned_cols=246 Identities=22% Similarity=0.354 Sum_probs=197.8
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|++. +|+.||||+++... ......+.+|..+++.+ +||||+++++++.+ .+..++||
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~lv~ 103 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-PDRLFFVM 103 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-CCEEEEEE
Confidence 556789999999999999986 68999999997542 23445678999999988 79999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 104 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~- 178 (353)
T 3txo_A 104 EFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG- 178 (353)
T ss_dssp ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred eCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCCCCEEEccccceeecccCC-
Confidence 999999999999875 3689999999999999999999995 99999999999999999999999999997543222
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+.. ..+...... + ..
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~---~~i~~~~~~---~-------p~ 245 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF---EAILNDEVV---Y-------PT 245 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHCCCC---C-------CT
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH---HHHHcCCCC---C-------CC
Confidence 2233457999999999999999999999999999999999999999876543332 233222110 0 01
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEV------LQVVQQ 556 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~------~ev~~~ 556 (580)
.. ...+.+++.+||+.||++||++ .|+++|
T Consensus 246 ~~---~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 246 WL---HEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred CC---CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 11 2356678889999999999998 777764
No 55
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.9e-43 Score=353.61 Aligned_cols=256 Identities=21% Similarity=0.358 Sum_probs=203.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCE----EEEEEccccc-cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQ----VAVKRLREKI-TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
|...+.||+|+||.||+|.+. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..++|
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v 92 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQLV 92 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC--BSSEEEE
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCccEEE
Confidence 556789999999999999975 4544 7888775433 223356788999999999999999999985 4578999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999764 24688899999999999999999995 99999999999999999999999999998765443
Q ss_pred cc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 443 NV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 443 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
.. ......++..|+|||.+.+..++.++|||||||++|||++ |+.||......+....+.... ... .+
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~---~~---- 239 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE---RLA---QP---- 239 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTC---BCC---CC----
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCC---CCC---CC----
Confidence 22 2334567889999999999999999999999999999999 999998876655444433211 100 00
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
.. ...++.+++.+||+.||++|||+.+++++|+++....
T Consensus 240 --~~---~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 240 --QI---CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp --TT---BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred --Cc---CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 00 1114567888999999999999999999999987554
No 56
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.9e-43 Score=345.21 Aligned_cols=257 Identities=21% Similarity=0.360 Sum_probs=197.2
Q ss_pred HHhhhccccccCceEEEEEEeCC----CCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLED----GSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
.|.+.+.||+|+||.||+|.+.. +..||+|.++.... ...+.+.+|+.++++++||||+++++++. ++..++|
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~lv 93 (281)
T 1mp8_A 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWII 93 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCEEE
T ss_pred HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc--cCccEEE
Confidence 46678999999999999998752 45699999875433 23456899999999999999999999984 4578999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 94 MELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999999999865 24689999999999999999999994 99999999999999999999999999998765544
Q ss_pred ccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 443 NVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
........+++.|+|||.+.+..++.++||||||+++|||++ |..||......+....+. ..... ..
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~---~~~~~---------~~ 238 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE---NGERL---------PM 238 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH---TTCCC---------CC
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH---cCCCC---------CC
Confidence 333334457788999999998899999999999999999997 999998766544433322 11110 01
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
.+.. ...+.+++.+||+.||++|||+.|++++|+++.++.
T Consensus 239 ~~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 239 PPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp CTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1112 235667888999999999999999999999986543
No 57
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.5e-42 Score=344.51 Aligned_cols=258 Identities=25% Similarity=0.379 Sum_probs=198.3
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhc--CCCCcceeeeeEEECC---CCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGK--IRHPNLLALRAYYLGP---KGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~---~~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|.+ +|+.||||++... ....+.+|.+++.. ++||||+++++++... ....++||
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 55679999999999999988 5899999998643 33455566666665 7999999999987642 33578999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccCCCCCCCeeeCCCCCeEEeecccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--------SNENIIHGNLTSSNVLLDDSTNAKISDFGLS 435 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~ 435 (580)
||+++|+|.++++.. .+++..+..++.|++.||+||| + ++|+||||||+||+++.++.+||+|||++
T Consensus 86 e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 86 HYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK-PAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp CCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB-CEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred hhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC-CCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999653 5899999999999999999999 8 59999999999999999999999999999
Q ss_pred cccccccccc---eeeecCccccCCccccccC------CCCCcccchhHHHHHHHHHcC----------CCCCCCCCCCC
Q 008031 436 RLMTAAANVN---VIATAGALGYRAPELSKLK------KANTKTDVYSLGVTILELLTG----------KSPGEPLNGAE 496 (580)
Q Consensus 436 ~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~el~tg----------~~p~~~~~~~~ 496 (580)
+......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 7654433221 2234789999999998876 455789999999999999999 88886543322
Q ss_pred -hhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 008031 497 -LPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560 (580)
Q Consensus 497 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~ 560 (580)
....+................ ........++.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPNIPNR-----WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGG-----GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCCCChh-----hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 222222222111111100000 01123456788999999999999999999999999986
No 58
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-43 Score=354.67 Aligned_cols=260 Identities=24% Similarity=0.386 Sum_probs=207.3
Q ss_pred HhhhccccccCceEEEEEEeC------CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE------DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|+.++++++||||+++++++.. .+..++
T Consensus 49 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~l 127 (343)
T 1luf_A 49 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-GKPMCL 127 (343)
T ss_dssp CEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSCEE
T ss_pred CeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CCceEE
Confidence 556789999999999999975 347899999976533 234678999999999999999999999976 668999
Q ss_pred EEeeCCCCChhhhhhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCee
Q 008031 362 VFDYMPHGSLATFLHARGP---------------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVL 420 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil 420 (580)
||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. ||+||||||+||+
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl 206 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLATRNCL 206 (343)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEE
T ss_pred EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEE
Confidence 9999999999999987431 14689999999999999999999995 9999999999999
Q ss_pred eCCCCCeEEeecccccccccccc-cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChh
Q 008031 421 LDDSTNAKISDFGLSRLMTAAAN-VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELP 498 (580)
Q Consensus 421 ~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~ 498 (580)
++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||......+..
T Consensus 207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 286 (343)
T 1luf_A 207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI 286 (343)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHH
Confidence 99999999999999976543322 22234567889999999998899999999999999999999 99999765533322
Q ss_pred HHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 499 QWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
. .+...... ...... ..++.+++.+||+.||++|||+.+++++|+++.+...
T Consensus 287 ~---~~~~~~~~---------~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 287 Y---YVRDGNIL---------ACPENC---PLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp H---HHHTTCCC---------CCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred H---HHhCCCcC---------CCCCCC---CHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 2 22211110 001111 2356788889999999999999999999999876543
No 59
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.3e-43 Score=357.62 Aligned_cols=261 Identities=25% Similarity=0.360 Sum_probs=207.9
Q ss_pred HHhhhccccccCceEEEEEEe------CCCCEEEEEEccccccc-cHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcE
Q 008031 288 LCATAEIMGKSTYGTVYKATL------EDGSQVAVKRLREKITK-GQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEK 359 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 359 (580)
.|.+.+.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|++++.++ +||||+++++++...+...
T Consensus 23 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 102 (359)
T 3vhe_A 23 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 102 (359)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCC
T ss_pred ceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCce
Confidence 356788999999999999974 25678999999764432 345789999999999 8999999999998766669
Q ss_pred EEEEeeCCCCChhhhhhhcCC-----------------------------------------------------------
Q 008031 360 LLVFDYMPHGSLATFLHARGP----------------------------------------------------------- 380 (580)
Q Consensus 360 ~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------------- 380 (580)
++||||+++|+|.++++....
T Consensus 103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (359)
T 3vhe_A 103 MVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAP 182 (359)
T ss_dssp EEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------------
T ss_pred EEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccc
Confidence 999999999999999976532
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc-cceeeecCcccc
Q 008031 381 ----ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN-VNVIATAGALGY 455 (580)
Q Consensus 381 ----~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y 455 (580)
...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....... .......||+.|
T Consensus 183 ~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y 261 (359)
T 3vhe_A 183 EDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261 (359)
T ss_dssp -CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGG
T ss_pred cchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCcee
Confidence 11288999999999999999999994 999999999999999999999999999986643322 223345678899
Q ss_pred CCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHH
Q 008031 456 RAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLK 534 (580)
Q Consensus 456 ~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 534 (580)
+|||++.+..++.++|||||||++|||++ |+.||......+.. ........... ..... ..++.+
T Consensus 262 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~~~~~~~~~~~--------~~~~~---~~~l~~ 327 (359)
T 3vhe_A 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRLKEGTRMR--------APDYT---TPEMYQ 327 (359)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH---HHHHHHTCCCC--------CCTTC---CHHHHH
T ss_pred EChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH---HHHHHcCCCCC--------CCCCC---CHHHHH
Confidence 99999999999999999999999999998 99999776543321 11111111100 01111 235678
Q ss_pred HHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 535 LALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 535 li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
++.+||+.||++|||+.|++++|+.+.+.
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 88899999999999999999999998653
No 60
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.7e-43 Score=350.44 Aligned_cols=263 Identities=22% Similarity=0.388 Sum_probs=202.6
Q ss_pred HHhhhccccccCceEEEEEEe-----CCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECC-CCcEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATL-----EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGP-KGEKLL 361 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~~l 361 (580)
.|.+.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++... ....++
T Consensus 11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 90 (295)
T 3ugc_A 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90 (295)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence 356789999999999999984 26889999999866555567899999999999999999999998642 245899
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++......
T Consensus 91 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 91 IMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT-KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999998752 358999999999999999999999 59999999999999999999999999999876543
Q ss_pred ccc--ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCC---------ChhH---HHHHHhhh
Q 008031 442 ANV--NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGA---------ELPQ---WVASIVKE 507 (580)
Q Consensus 442 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~---------~~~~---~~~~~~~~ 507 (580)
... ......++..|+|||.+.+..++.++||||||+++|||++|..||...... .... .+......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 221 122335677899999999999999999999999999999999998642110 0000 00000110
Q ss_pred hccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
.. ..+.......++.+++.+||+.||++|||+.|+++.|++++++-
T Consensus 248 ~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 248 NG-----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TC-----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cC-----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 00 01111112235678888999999999999999999999987653
No 61
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1e-42 Score=350.50 Aligned_cols=259 Identities=14% Similarity=0.163 Sum_probs=211.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+|+++++++ +||||+++++++.. .+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e~~ 87 (330)
T 2izr_A 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-GKYNAMVLELL 87 (330)
T ss_dssp EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-TTEEEEEEECC
T ss_pred eEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEec-CCccEEEEEeC
Confidence 556789999999999999974 78999999986442 234688999999999 99999999999987 66889999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC-----eEEeecccccccccc
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN-----AKISDFGLSRLMTAA 441 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~-----~kl~Dfg~~~~~~~~ 441 (580)
+++|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||+++.....
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 88 -GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 99999999864 24699999999999999999999995 9999999999999998877 999999999876443
Q ss_pred ccc------ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccc
Q 008031 442 ANV------NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFD 515 (580)
Q Consensus 442 ~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (580)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......+........
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~--- 240 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP--- 240 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC---
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC---
Confidence 321 12345799999999999999999999999999999999999999998877766665555433222110
Q ss_pred hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 516 LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 516 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
... .....+ ++.+++.+||+.||.+||++.++++.|+++...
T Consensus 241 ~~~--~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 241 IEV--LCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHH--HTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHH--HhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 000 011111 677889999999999999999999999987644
No 62
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=360.77 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=203.3
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
..|.+.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+ ++..++||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lv~ 89 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGHHYLIF 89 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-SSEEEEEE
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-CCEEEEEE
Confidence 45778899999999999999875 789999999865432 234568999999999999999999999986 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC---CCCCeEEeeccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD---DSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~---~~~~~kl~Dfg~~~~~~~ 440 (580)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++ +++.+||+|||++.....
T Consensus 90 E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 90 DLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 999999999999875 3689999999999999999999994 999999999999998 467899999999987654
Q ss_pred ccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 441 AANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+..+.+ ..+... .+...
T Consensus 166 ~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i---~~~~~~---~~~~~-- 236 (444)
T 3soa_A 166 EQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI---KAGAYD---FPSPE-- 236 (444)
T ss_dssp TCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHTCCC---CCTTT--
T ss_pred CCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHH---HhCCCC---CCccc--
Confidence 322 223457999999999999999999999999999999999999999765543333222 222111 00000
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.+.. ..++.+++.+||+.||++|||+.|++++-
T Consensus 237 -~~~~---s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 237 -WDTV---TPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp -TTTS---CHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred -cccC---CHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 1112 23566888899999999999999999863
No 63
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.1e-42 Score=353.87 Aligned_cols=251 Identities=24% Similarity=0.304 Sum_probs=202.9
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
-.|.+.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+ .+..++||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~ 107 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVF 107 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEE
Confidence 35778899999999999999986 789999999865432 234568899999999999999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC---CCeEEeeccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS---TNAKISDFGLSRLMTA 440 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~---~~~kl~Dfg~~~~~~~ 440 (580)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.+ +.+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 999999999998764 3689999999999999999999995 99999999999999864 4599999999987654
Q ss_pred ccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 441 AANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+..+... .+..+... .....+.
T Consensus 184 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~---~i~~~~~~---~~~~~~~ 255 (362)
T 2bdw_A 184 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA---QIKAGAYD---YPSPEWD 255 (362)
T ss_dssp CCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCC---CCTTGGG
T ss_pred Ccc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHhCCCC---CCccccc
Confidence 322 234579999999999999999999999999999999999999997654332222 22222111 0001111
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
....++.+++.+||+.||++|||+.|++++
T Consensus 256 ------~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 256 ------TVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ------GSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112356788899999999999999999877
No 64
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-42 Score=355.68 Aligned_cols=251 Identities=21% Similarity=0.383 Sum_probs=204.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|.+.+.||+|+||.||+|.+. +|+.||+|++..........+.+|+.++++++||||+++++++.+ ....++||||++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~ 131 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILEFLS 131 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEECCC
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-CCEEEEEEEcCC
Confidence 667899999999999999986 789999999876554455678999999999999999999999987 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC--CCCeEEeecccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD--STNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
+|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+|||++. ++.+||+|||+++.......
T Consensus 132 gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~-- 206 (387)
T 1kob_A 132 GGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-- 206 (387)
T ss_dssp CCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC--
T ss_pred CCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecccceecCCCcc--
Confidence 99999999754 24689999999999999999999994 9999999999999974 57799999999987654332
Q ss_pred eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 446 VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+.. ..+....+. .+... ....
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---~~i~~~~~~---~~~~~---~~~~ 277 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL---QNVKRCDWE---FDEDA---FSSV 277 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH---HHHHHCCCC---CCSST---TTTS
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH---HHHHhCCCC---CCccc---cccC
Confidence 23457999999999999999999999999999999999999999875433222 222221111 11111 1111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
..++.+++.+||+.||++|||+.|++++-
T Consensus 278 ---s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 278 ---SPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 23567888999999999999999999873
No 65
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.3e-43 Score=351.22 Aligned_cols=246 Identities=24% Similarity=0.348 Sum_probs=200.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.+++.++||||+++++++.. .+..++|||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~E 89 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-PTDIVMVIE 89 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEE
Confidence 566799999999999999984 79999999986432 2234578999999999999999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+ +|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||++++++.+||+|||++.........
T Consensus 90 ~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~ 164 (336)
T 3h4j_B 90 YA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL 164 (336)
T ss_dssp CC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT
T ss_pred CC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc
Confidence 99 78999998765 3689999999999999999999995 9999999999999999999999999999876543322
Q ss_pred ceeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 445 NVIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||......+....+.. . . .....
T Consensus 165 --~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~---~---------~-~~~p~ 229 (336)
T 3h4j_B 165 --KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS---C---------V-YVMPD 229 (336)
T ss_dssp --CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS---S---------C-CCCCT
T ss_pred --ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc---C---------C-CCCcc
Confidence 33569999999999988776 6899999999999999999999976544332221110 0 0 00011
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
.. ...+.+++.+||+.||.+|||+.|++++-.
T Consensus 230 ~~---s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 230 FL---SPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp TS---CHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred cC---CHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 11 235668888999999999999999998754
No 66
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-43 Score=355.61 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=199.4
Q ss_pred HhhhccccccCceEEEEEEeC--CC--CEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE--DG--SQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|...+.||+|+||.||+|.+. ++ ..||+|.++.... ...+.+.+|+.++++++||||+++++++...++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 455789999999999999864 22 3689999865433 334678999999999999999999999876666889999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++|+|.++++.. ...+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+++.......
T Consensus 171 e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp ECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred ECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999764 34588999999999999999999994 999999999999999999999999999986643322
Q ss_pred c---ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 444 V---NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 444 ~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
. ......+++.|+|||.+.+..++.++|||||||++|||++ |.+||...+..+....+.. +...
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~---~~~~--------- 315 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ---GRRL--------- 315 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT---TCCC---------
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc---CCCC---------
Confidence 1 2233457788999999999999999999999999999999 7888877766555443322 1110
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
......+ ..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 316 ~~p~~~~---~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 316 LQPEYCP---DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp CCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred CCCCCCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0111122 256678889999999999999999999999865443
No 67
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-42 Score=345.28 Aligned_cols=243 Identities=24% Similarity=0.361 Sum_probs=201.8
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+ ....++|||
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lv~e 86 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFMIMD 86 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEEEEC
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-CCEEEEEEe
Confidence 556789999999999999986 79999999987542 2345678899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 87 YIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp CCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred CCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 99999999999874 3689999999999999999999994 9999999999999999999999999999865432
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+.. .....+...... . .+.
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~-------~---p~~ 225 (318)
T 1fot_A 160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---KTYEKILNAELR-------F---PPF 225 (318)
T ss_dssp -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHHCCCC-------C---CTT
T ss_pred -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCC-------C---CCC
Confidence 22457999999999999999999999999999999999999999765432 223333322110 0 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARP-----EVLQVVQQ 556 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rp-----s~~ev~~~ 556 (580)
.. .++.+++.+||+.||++|| ++.|+++|
T Consensus 226 ~~---~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 226 FN---EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp SC---HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CC---HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 11 3566788899999999999 89999876
No 68
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=351.58 Aligned_cols=247 Identities=22% Similarity=0.324 Sum_probs=202.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+ .+..++|||
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lv~e 95 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-EEDMFMVVD 95 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEEe
Confidence 566799999999999999986 68899999986432 2345678899999999999999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 169 (384)
T 4fr4_A 96 LLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-- 169 (384)
T ss_dssp CCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECCCCCEEEeccceeeeccCCC--
Confidence 99999999999864 3689999999999999999999994 99999999999999999999999999998764332
Q ss_pred ceeeecCccccCCcccccc---CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 445 NVIATAGALGYRAPELSKL---KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..............+...... .
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~----------~ 239 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT----------Y 239 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC----------C
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC----------C
Confidence 2334679999999999863 45899999999999999999999999876655544444433221110 0
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPE-VLQVVQ 555 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps-~~ev~~ 555 (580)
... ....+.+++.+||+.||.+||+ +.++.+
T Consensus 240 p~~---~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 240 PSA---WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CTT---SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCc---CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111 1235678888999999999998 777665
No 69
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=6.4e-43 Score=359.88 Aligned_cols=251 Identities=21% Similarity=0.266 Sum_probs=202.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. +++.||+|+++... ......+.+|+.+++.++||||+++++++.+ .+..++|||
T Consensus 71 y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lV~E 149 (410)
T 3v8s_A 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-DRYLYMVME 149 (410)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred cEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEe
Confidence 456789999999999999986 68999999986532 2233458899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.++++.. .+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++........
T Consensus 150 ~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 224 (410)
T 3v8s_A 150 YMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224 (410)
T ss_dssp CCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred CCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence 99999999999764 489999999999999999999994 9999999999999999999999999999876554433
Q ss_pred ceeeecCccccCCccccccCC----CCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 445 NVIATAGALGYRAPELSKLKK----ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+..+ ....+......... .
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~~~~i~~~~~~~~~------p 295 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---TYSKIMNHKNSLTF------P 295 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHTHHHHCCC------C
T ss_pred cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh---HHHHHHhccccccC------C
Confidence 344567999999999987655 7889999999999999999999998654332 33333322111000 0
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHHH
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSA--RPEVLQVVQQL 557 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~ev~~~L 557 (580)
.....+ .++.+++.+||+.+|.+ ||++.|+++|-
T Consensus 296 ~~~~~s---~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 296 DDNDIS---KEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp TTCCCC---HHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred Cccccc---HHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 011122 35667888999999998 99999999885
No 70
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4e-42 Score=340.98 Aligned_cols=265 Identities=16% Similarity=0.207 Sum_probs=213.0
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+|+.+++.+ +|+|++++++++.. ....++||||+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~lv~e~~ 88 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVIDLL 88 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEEECC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-CceeEEEEEec
Confidence 556789999999999999974 78999999985432 334678899999999 89999999999976 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC-----eEEeecccccccccc
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN-----AKISDFGLSRLMTAA 441 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~-----~kl~Dfg~~~~~~~~ 441 (580)
+++|.+++...+ ..+++..+..++.||+.||+|||+ .||+||||||+||+++.++. +||+|||+++.....
T Consensus 89 -~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 89 -GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHE-KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 999999998753 358999999999999999999999 49999999999999987765 999999999876543
Q ss_pred ccc------ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccc
Q 008031 442 ANV------NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFD 515 (580)
Q Consensus 442 ~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (580)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........+....+.........
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-- 242 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH--
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH--
Confidence 321 223456999999999999999999999999999999999999999887666555544443332211110
Q ss_pred hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccccccc
Q 008031 516 LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAA 568 (580)
Q Consensus 516 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~ 568 (580)
... .+.. ..++.+++.+||+.||++|||+.++++.|+++..+.....
T Consensus 243 ~~~---~~~~---~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~ 289 (298)
T 1csn_A 243 REL---CAGF---PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTE 289 (298)
T ss_dssp HHH---TTTS---CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred HHH---HhhC---cHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCC
Confidence 011 1111 1356688889999999999999999999999876554433
No 71
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.5e-42 Score=342.32 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=198.1
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|...+.||+|+||.||+|...+|+.||+|++..... .....+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 82 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFEHL 82 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-SSCEEEEEECC
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-CCeEEEEEEec
Confidence 456789999999999999998899999999864432 234678899999999999999999999987 56899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
++ +|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....... ..
T Consensus 83 ~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 157 (288)
T 1ob3_A 83 DQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KY 157 (288)
T ss_dssp SE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred CC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-cc
Confidence 75 999988764 24689999999999999999999995 999999999999999999999999999976543221 22
Q ss_pred eeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc--------ccchh
Q 008031 447 IATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE--------VFDLE 517 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 517 (580)
....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+....+........... .+++.
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence 33468999999999865 4589999999999999999999999987654333333322211110000 00100
Q ss_pred hhccCC-----CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 518 LMRDAP-----TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 518 ~~~~~~-----~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.....+ .......++.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 000112356688999999999999999999875
No 72
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.5e-43 Score=356.22 Aligned_cols=273 Identities=23% Similarity=0.350 Sum_probs=206.1
Q ss_pred HHhhhccccccCceEEEEEEe-----CCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEEC-CCCcEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATL-----EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG-PKGEKLL 361 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~~l 361 (580)
.|.+.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++.. .....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 356789999999999999984 3688999999987655556779999999999999999999999875 3456889
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++......
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGS-RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh-CCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999997642 358999999999999999999999 49999999999999999999999999999876543
Q ss_pred ccc--ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCC-----------ChhHHHHHHhhhh
Q 008031 442 ANV--NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGA-----------ELPQWVASIVKEE 508 (580)
Q Consensus 442 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~-----------~~~~~~~~~~~~~ 508 (580)
... ......+|..|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+.......
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 322 122345788899999999889999999999999999999999998642211 0001111111111
Q ss_pred ccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccCCCCCC
Q 008031 509 WTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAATSSGDA 574 (580)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~~~~~~ 574 (580)
.. .+........+.+++.+||+.||++|||+.|++++|+.+........+...++
T Consensus 261 ~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~ 315 (327)
T 3lxl_A 261 QR-----------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTA 315 (327)
T ss_dssp CC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--------------
T ss_pred cC-----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCcccccccc
Confidence 00 01111122356788889999999999999999999999987666555544333
No 73
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-42 Score=348.04 Aligned_cols=259 Identities=25% Similarity=0.377 Sum_probs=209.3
Q ss_pred HHhhhccccccCceEEEEEEe------CCCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 288 LCATAEIMGKSTYGTVYKATL------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
.|.+.+.||+|+||.||+|.+ .+++.||+|+++.... ...+.+.+|++++++++||||+++++++.. .+..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~ 102 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DGPLL 102 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCE
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec-CCceE
Confidence 466789999999999999986 2457899999975433 334678999999999999999999999976 66899
Q ss_pred EEEeeCCCCChhhhhhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCe
Q 008031 361 LVFDYMPHGSLATFLHARGP---------------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNV 419 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Ni 419 (580)
+||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. ||+||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC-CCcccccchheE
Confidence 99999999999999987532 13488999999999999999999995 999999999999
Q ss_pred eeCCCCCeEEeeccccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCCh
Q 008031 420 LLDDSTNAKISDFGLSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAEL 497 (580)
Q Consensus 420 l~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~ 497 (580)
+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......+.
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999866443222 2223457788999999998899999999999999999999 9999987665443
Q ss_pred hHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 498 PQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
...+.. .... . ..... ...+.+++.+||+.||++|||+.|++++|+++..+
T Consensus 262 ~~~~~~----~~~~-----~---~~~~~---~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 262 FNLLKT----GHRM-----E---RPDNC---SEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HHHHHT----TCCC-----C---CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHhhc----CCcC-----C---CCccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 333221 1100 0 01111 23567888899999999999999999999998654
No 74
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-42 Score=351.88 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=202.7
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEccccc-----cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI-----TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
..|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.. ++..+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~ 102 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-DGMLY 102 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEE
Confidence 35788899999999999999986 79999999986432 1235678999999999999999999999987 66899
Q ss_pred EEEeeCCCCChhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC---eEEeeccccc
Q 008031 361 LVFDYMPHGSLATFLHARG-PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN---AKISDFGLSR 436 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~---~kl~Dfg~~~ 436 (580)
+||||+++|+|.+++.... ....+++..+..++.||+.||+|||+. ||+||||||+||+++.++. +||+|||++.
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 9999999999998886532 234589999999999999999999995 9999999999999986554 9999999998
Q ss_pred ccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccch
Q 008031 437 LMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL 516 (580)
Q Consensus 437 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ......+...... .++
T Consensus 182 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~i~~~~~~---~~~ 253 (351)
T 3c0i_A 182 QLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFEGIIKGKYK---MNP 253 (351)
T ss_dssp ECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----HHHHHHHHHTCCC---CCH
T ss_pred EecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----HHHHHHHHcCCCC---CCc
Confidence 7654322 2234569999999999999999999999999999999999999997632 1222222222111 111
Q ss_pred hhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 517 ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 517 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..+. .. ..++.+++.+||+.||++|||+.|+++|
T Consensus 254 ~~~~---~~---s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 254 RQWS---HI---SESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHHT---TS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccc---cC---CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111 11 2356788899999999999999999875
No 75
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=9.9e-43 Score=343.63 Aligned_cols=259 Identities=25% Similarity=0.388 Sum_probs=213.3
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
.|...+.||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|++++++++||||+++++++.. ++..++||||+
T Consensus 14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~ 91 (288)
T 3kfa_A 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFM 91 (288)
T ss_dssp GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEECC
T ss_pred ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCEEEEEEcC
Confidence 3566789999999999999987 58899999987542 345678999999999999999999999976 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
++++|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++...........
T Consensus 92 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 92 TYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp TTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 9999999998753 34689999999999999999999994 999999999999999999999999999987765544444
Q ss_pred eeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 447 IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
....+++.|+|||.+.+..++.++||||+|+++|+|++ |..||...+..+....+... ... . .....
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~----~~~-----~---~~~~~ 237 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD----YRM-----E---RPEGC 237 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT----CCC-----C---CCTTC
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc----CCC-----C---CCCCC
Confidence 44557788999999998999999999999999999999 99999876554443333221 100 0 01111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
...+.+++.+||+.||++|||+.++++.|+.+..+..
T Consensus 238 ---~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 238 ---PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 2356788889999999999999999999999876543
No 76
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=343.33 Aligned_cols=254 Identities=25% Similarity=0.407 Sum_probs=198.5
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
|.+.+.||+|+||.||+|.+. ++.||+|.+... ...+.+.+|++++++++||||+++++++. +..++||||+++
T Consensus 10 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---~~~~lv~e~~~~ 83 (307)
T 2eva_A 10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEG 83 (307)
T ss_dssp EEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT---TTTEEEEECCTT
T ss_pred eeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCcEEEEEcCCC
Confidence 456789999999999999986 788999998643 34567899999999999999999999875 358999999999
Q ss_pred CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC--CCcccCCCCCCCeeeCCCCC-eEEeecccccccccccccc
Q 008031 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN--ENIIHGNLTSSNVLLDDSTN-AKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 369 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--~~i~H~Dlk~~Nil~~~~~~-~kl~Dfg~~~~~~~~~~~~ 445 (580)
|+|.+++........+++..+..++.|+++||+|||+. .||+||||||+||+++.++. +||+|||++.......
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~--- 160 (307)
T 2eva_A 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM--- 160 (307)
T ss_dssp CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc---
Confidence 99999998765444588999999999999999999982 38999999999999998876 7999999997554321
Q ss_pred eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 446 VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ............ .. ....
T Consensus 161 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~------~~---~~~~ 229 (307)
T 2eva_A 161 -TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-RIMWAVHNGTRP------PL---IKNL 229 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-HHHHHHHTTCCC------CC---BTTC
T ss_pred -ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-HHHHHHhcCCCC------Cc---cccc
Confidence 234589999999999999999999999999999999999999976543321 111111111110 01 1111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
...+.+++.+||+.||++|||+.++++.|+.+.+...
T Consensus 230 ---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 230 ---PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred ---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 2356688889999999999999999999999875543
No 77
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1e-41 Score=336.18 Aligned_cols=250 Identities=26% Similarity=0.470 Sum_probs=199.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccccc-------HHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKG-------QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
|...+.||+|+||.||+|.+. +++.||+|++....... .+.+.+|++++++++||||+++++++.+ ..+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 97 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---PPR 97 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---TTE
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---CCe
Confidence 556789999999999999985 79999999986443221 1578999999999999999999999854 337
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccCCCCCCCeeeCCCCC-----eEEeecc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN--IIHGNLTSSNVLLDDSTN-----AKISDFG 433 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~--i~H~Dlk~~Nil~~~~~~-----~kl~Dfg 433 (580)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||+. | |+||||||+||+++.++. +||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred EEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 999999999999988764 34689999999999999999999995 8 999999999999987776 9999999
Q ss_pred cccccccccccceeeecCccccCCcccc--ccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccc
Q 008031 434 LSRLMTAAANVNVIATAGALGYRAPELS--KLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTN 511 (580)
Q Consensus 434 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~--~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (580)
+++.... ......||+.|+|||.+ ....++.++||||+||++|||++|+.||......+.. ............
T Consensus 175 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~ 249 (287)
T 4f0f_A 175 LSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-FINMIREEGLRP 249 (287)
T ss_dssp TCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH-HHHHHHHSCCCC
T ss_pred ccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH-HHHHHhccCCCC
Confidence 9975433 23345789999999998 4556788999999999999999999999876554322 122222111111
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~ 560 (580)
.. .... ...+.+++.+||+.||++|||+.|+++.|+++
T Consensus 250 -----~~---~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 250 -----TI---PEDC---PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -----CC---CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -----CC---Cccc---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11 1111 23567888899999999999999999999874
No 78
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.8e-42 Score=345.78 Aligned_cols=252 Identities=22% Similarity=0.301 Sum_probs=199.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+ .+..++||||+
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~~ 87 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLEYC 87 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEEEcC
Confidence 566799999999999999987 799999999864432 234568899999999999999999999986 66889999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc-cc
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN-VN 445 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 445 (580)
++|+|.+++... ..+++..+..++.||+.||+|||+ .||+||||||+||+++.++.+||+|||+++....... ..
T Consensus 88 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 88 SGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp TTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHH-CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 999999999764 358999999999999999999999 5999999999999999999999999999986643322 22
Q ss_pred eeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 446 VIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
.....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.......... ......... .+.
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~~~~~~~~~-----------~~~ 230 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--SDWKEKKTY-----------LNP 230 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH--HHHHTTCTT-----------STT
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHHhccccc-----------CCc
Confidence 234579999999999887765 678999999999999999999998655432211 111111100 000
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
.......+.+++.+||+.||++|||+.|++++-.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 0111235668899999999999999999998754
No 79
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7.3e-43 Score=352.05 Aligned_cols=246 Identities=24% Similarity=0.338 Sum_probs=200.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|.+. +|+.||||+++... ......+..|..++..+ +||||+++++++.+ .+..++||
T Consensus 19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-~~~~~lv~ 97 (345)
T 1xjd_A 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENLFFVM 97 (345)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-CCEEEEEE
Confidence 556789999999999999986 68999999997542 23456678899999887 99999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++......
T Consensus 98 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 172 (345)
T 1xjd_A 98 EYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD- 172 (345)
T ss_dssp ECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred eCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-
Confidence 999999999999874 3689999999999999999999995 99999999999999999999999999997543222
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+..+ .+..... .. ..
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~---~i~~~~~-------~~---p~ 239 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH---SIRMDNP-------FY---PR 239 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCC-------CC---CT
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHH---HHHhCCC-------CC---Cc
Confidence 22334679999999999999999999999999999999999999997655333222 2222111 00 01
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHH-HHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVL-QVVQQ 556 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~-ev~~~ 556 (580)
.. ..++.+++.+||+.||++||++. ++++|
T Consensus 240 ~~---s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 240 WL---EKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp TS---CHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred cc---CHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 11 23566888899999999999998 77654
No 80
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=353.27 Aligned_cols=247 Identities=26% Similarity=0.372 Sum_probs=197.1
Q ss_pred hccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCCCC
Q 008031 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGS 370 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~g~ 370 (580)
.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.. .+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-KNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeCCCCCc
Confidence 567999999999999975 799999999976655566789999999999999999999999987 668999999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee--CCCCCeEEeecccccccccccccceee
Q 008031 371 LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL--DDSTNAKISDFGLSRLMTAAANVNVIA 448 (580)
Q Consensus 371 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 448 (580)
|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+|||+ +.++.+||+|||+++........ ..
T Consensus 173 L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~--~~ 247 (373)
T 2x4f_A 173 LFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL--KV 247 (373)
T ss_dssp EHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC--CC
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc--cc
Confidence 99998754 23589999999999999999999994 99999999999999 56778999999999876543322 23
Q ss_pred ecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHHH
Q 008031 449 TAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDE 528 (580)
Q Consensus 449 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (580)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+ .+..+....+.. .... .+..
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~~i~~~~~~~---~~~~---~~~~--- 315 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE---TLNNILACRWDL---EDEE---FQDI--- 315 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHHTCCCS---CSGG---GTTS---
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhccCCC---Chhh---hccC---
Confidence 469999999999998999999999999999999999999997655332 233333222110 0011 1111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 529 LLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 529 ~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..++.+++.+||+.||++|||+.|++++
T Consensus 316 ~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 316 SEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 2356788899999999999999999985
No 81
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-42 Score=341.50 Aligned_cols=256 Identities=22% Similarity=0.363 Sum_probs=204.0
Q ss_pred HhhhccccccCceEEEEEEeCC----CCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLED----GSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|...+.||+|+||.||+|.+.. +..||+|.++.... ...+.+.+|+.++++++||||+++++++.+ +..++||
T Consensus 14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~ 91 (281)
T 3cc6_A 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE--EPTWIIM 91 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS--SSCEEEE
T ss_pred eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCEEEE
Confidence 5667999999999999998642 33599999876532 345678999999999999999999999864 4678999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++........
T Consensus 92 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 92 ELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp ECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred ecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 9999999999997652 4589999999999999999999994 999999999999999999999999999987655443
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDA 522 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (580)
.......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||......+....+.. .... ...
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~---~~~~---------~~~ 236 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRL---------PKP 236 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH---TCCC---------CCC
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc---CCCC---------CCC
Confidence 33344567889999999998999999999999999999998 9999986655444333222 1110 001
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 523 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
... ...+.+++.+||+.||++|||+.|++++|+++....
T Consensus 237 ~~~---~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 237 DLC---PPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 111 235668888999999999999999999999986543
No 82
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=344.00 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=193.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc--------------------------cHHHHHHHHHHHhcCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK--------------------------GQREFESEVSLLGKIR 341 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~~l~ 341 (580)
|.+.+.||+|+||.||+|.+. +++.||||++...... ..+.+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 566799999999999999976 7889999998643211 1246889999999999
Q ss_pred CCcceeeeeEEECC-CCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCee
Q 008031 342 HPNLLALRAYYLGP-KGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVL 420 (580)
Q Consensus 342 h~niv~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil 420 (580)
||||+++++++... .+..++||||+++++|.+++.. ..+++..+..++.||+.||+|||+. ||+||||||+||+
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLL 169 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEE
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEE
Confidence 99999999999863 4578999999999999887653 3699999999999999999999995 9999999999999
Q ss_pred eCCCCCeEEeecccccccccccccceeeecCccccCCccccccCC---CCCcccchhHHHHHHHHHcCCCCCCCCCCCCh
Q 008031 421 LDDSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLKK---ANTKTDVYSLGVTILELLTGKSPGEPLNGAEL 497 (580)
Q Consensus 421 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~ 497 (580)
++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||.....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--- 245 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI--- 245 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH---
T ss_pred ECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH---
Confidence 99999999999999987654322 223457999999999987655 36789999999999999999999976432
Q ss_pred hHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 498 PQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
......+...... . ...+.. ..++.+++.+||+.||++|||+.|+++|
T Consensus 246 ~~~~~~~~~~~~~-----~---~~~~~~---~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 MCLHSKIKSQALE-----F---PDQPDI---AEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHHHHHHHCCCC-----C---CSSSCC---CHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHHHHHHhcccCC-----C---CCcccc---CHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 2222222111110 0 001112 2356688889999999999999999875
No 83
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.7e-42 Score=353.57 Aligned_cols=268 Identities=15% Similarity=0.148 Sum_probs=202.4
Q ss_pred HhhhccccccCceEEEEEEeCC------CCEEEEEEccccccc-----------cHHHHHHHHHHHhcCCCCcceeeeeE
Q 008031 289 CATAEIMGKSTYGTVYKATLED------GSQVAVKRLREKITK-----------GQREFESEVSLLGKIRHPNLLALRAY 351 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~~ 351 (580)
|.+.+.||+|+||.||+|.+.+ ++.||||++...... ....+..|+..++.++||||++++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 5567999999999999998864 478999998654321 11234456677888899999999999
Q ss_pred EECCC---CcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC--CCCC
Q 008031 352 YLGPK---GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD--DSTN 426 (580)
Q Consensus 352 ~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~--~~~~ 426 (580)
+.... ...++||||+ +++|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+|||++ .++.
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEESSCTTC
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCHHHEEEecCCCCe
Confidence 87632 3479999999 99999999874 34699999999999999999999995 999999999999999 8899
Q ss_pred eEEeecccccccccccccc------eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChh-H
Q 008031 427 AKISDFGLSRLMTAAANVN------VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELP-Q 499 (580)
Q Consensus 427 ~kl~Dfg~~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-~ 499 (580)
+||+|||+++.+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....... .
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~ 272 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence 9999999998765432221 12345999999999999999999999999999999999999999864332211 1
Q ss_pred HHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccccc
Q 008031 500 WVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAAT 566 (580)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~ 566 (580)
....... .......+..+. ....+ .++.+++..||+.||++||++.++++.|+++..+...
T Consensus 273 ~~~~~~~-~~~~~~~~~~~~--~~~~~---~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 273 DSKIRYR-ENIASLMDKCFP--AANAP---GEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp HHHHHHH-HCHHHHHHHHSC--TTCCC---HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhh-hhHHHHHHHhcc--cccCH---HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 1111111 111111111110 01112 3566788899999999999999999999998655433
No 84
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.4e-42 Score=349.57 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=192.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|.+.+.||+|+||.||++... +++.||||++..... ..+.+.+|+.++++++||||+++++++.. .+..++||||++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~~ 99 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAIIMEYAS 99 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEECCC
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEee-CCEEEEEEEeCC
Confidence 567899999999999999987 799999999865432 34668899999999999999999999987 668999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC--eEEeecccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN--AKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~ 445 (580)
+|+|.+++...+ .+++..+..++.|++.||+|||+ .||+||||||+||+++.++. +||+|||+++...... .
T Consensus 100 ~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~-~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--~ 173 (361)
T 3uc3_A 100 GGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHS-MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--Q 173 (361)
T ss_dssp SCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH-TTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--C
Confidence 999999997643 58999999999999999999999 59999999999999987665 9999999987443222 2
Q ss_pred eeeecCccccCCccccccCCCCCc-ccchhHHHHHHHHHcCCCCCCCCCCCC-hhHHHHHHhhhhccccccchhhhccCC
Q 008031 446 VIATAGALGYRAPELSKLKKANTK-TDVYSLGVTILELLTGKSPGEPLNGAE-LPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~s~G~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.....||+.|+|||++.+..++.+ +||||+||++|+|++|+.||....... ....+..+....... ....
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 245 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI--------PDDI 245 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCC--------CTTS
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCC--------CCcC
Confidence 233569999999999988887766 899999999999999999998765433 233333322211100 0000
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
.. ...+.+++.+||+.||++|||+.|+++|-.
T Consensus 246 ~~---s~~~~~li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 246 RI---SPECCHLISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp CC---CHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred CC---CHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence 11 235668899999999999999999999854
No 85
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.2e-42 Score=340.23 Aligned_cols=258 Identities=26% Similarity=0.412 Sum_probs=205.8
Q ss_pred HHhhhccccccCceEEEEEEeCC----CCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLED----GSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
.|.+.+.||+|+||.||+|.+.+ +..||+|.+..... ...+.+.+|+.++++++||||+++++++...++..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 35667899999999999998642 23589999875433 23467899999999999999999999987767788999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||+++......
T Consensus 106 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 106 LPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh-CCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999764 3468999999999999999999999 499999999999999999999999999998664433
Q ss_pred c---cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhh
Q 008031 443 N---VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518 (580)
Q Consensus 443 ~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
. .......+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||...+..+....+... ...
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~-------- 251 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---RRL-------- 251 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT---CCC--------
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC---CCC--------
Confidence 2 12334467789999999999999999999999999999999 66777766655544433221 100
Q ss_pred hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 519 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
......+ ..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 252 -~~~~~~~---~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 252 -LQPEYCP---DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp -CCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -CCCccCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0011111 2567888899999999999999999999998654
No 86
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=347.16 Aligned_cols=256 Identities=23% Similarity=0.413 Sum_probs=200.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCE----EEEEEccccc-cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQ----VAVKRLREKI-TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
|...+.||+|+||.||+|.+. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.. +..++|
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~v 94 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQLI 94 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES--SSEEEE
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec--CCceEE
Confidence 567799999999999999975 4554 5777775433 3356789999999999999999999999985 358899
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
+||+.+|+|.+++.... ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp ECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhh-CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 99999999999998752 468999999999999999999999 499999999999999999999999999998764432
Q ss_pred c-cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 443 N-VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 443 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
. .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...+..+....+... ... .
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~---~~~---------~ 239 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---ERL---------P 239 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---CCC---------C
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC---CCC---------C
Confidence 2 22233456788999999999999999999999999999999 99999877655544433221 100 0
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
..+. ...++.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 240 ~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 240 QPPI---CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp CCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred CCcc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 1111 1235678888999999999999999999999987554
No 87
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.7e-42 Score=355.57 Aligned_cols=271 Identities=19% Similarity=0.268 Sum_probs=204.3
Q ss_pred HHhhhcccccc--CceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 288 LCATAEIMGKS--TYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 288 ~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
.|.+.+.||+| +||.||+|.+. +|+.||||+++.... ...+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 104 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWVV 104 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-CCEEEEE
Confidence 46678999999 99999999987 799999999975432 233568889999999999999999999987 6689999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||.+.......
T Consensus 105 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp EECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred EEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 99999999999998753 34589999999999999999999995 99999999999999999999999999886543221
Q ss_pred cc------ceeeecCccccCCcccccc--CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhc-----
Q 008031 443 NV------NVIATAGALGYRAPELSKL--KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW----- 509 (580)
Q Consensus 443 ~~------~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----- 509 (580)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+.............
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence 11 1112368899999999887 6799999999999999999999999987655443322111000000
Q ss_pred -cccccc-------------hhh-----------hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--Hhhhc
Q 008031 510 -TNEVFD-------------LEL-----------MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ--LEEIR 561 (580)
Q Consensus 510 -~~~~~~-------------~~~-----------~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~--L~~~~ 561 (580)
...... ... ....+........+.+++.+||+.||++|||+.|++++ ++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 000000 000 00000011122457789999999999999999999987 55554
No 88
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=9.6e-43 Score=342.08 Aligned_cols=256 Identities=23% Similarity=0.392 Sum_probs=207.8
Q ss_pred HHhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
.|...+.||+|+||.||+|.+.++..||+|.++... ...+.+.+|++++++++||||+++++++. ++..++||||++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~ 90 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYME 90 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEEEEECCT
T ss_pred hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc--CCCcEEEEecCC
Confidence 356789999999999999999888899999987543 34577899999999999999999999986 346899999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+++|.+++.... ...+++..+..++.|++.||+|||+. |++||||||+||++++++.+||+|||++............
T Consensus 91 ~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 91 NGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp TCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 999999997531 12589999999999999999999994 9999999999999999999999999999876544333333
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..+.+. .. ... . .....
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~-~~~-----~---~~~~~- 235 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---RG-YRM-----V---RPDNC- 235 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---TT-CCC-----C---CCTTC-
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHh---cc-cCC-----C---Ccccc-
Confidence 3456788999999998899999999999999999999 999997654333222221 11 100 0 01111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
..++.+++.+||+.||++|||+.++++.|+++...
T Consensus 236 --~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 236 --PEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp --CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --cHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 23567888899999999999999999999998654
No 89
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.5e-42 Score=348.26 Aligned_cols=244 Identities=20% Similarity=0.273 Sum_probs=202.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|...+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+ .+..++|||
T Consensus 43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 121 (350)
T 1rdq_E 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYMVME 121 (350)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CCEEEEEEc
Confidence 556789999999999999986 79999999986542 2345678899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 122 ~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-- 195 (350)
T 1rdq_E 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-- 195 (350)
T ss_dssp CCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB--
T ss_pred CCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCCCEEEcccccceeccCCc--
Confidence 999999999998753 589999999999999999999994 99999999999999999999999999998664322
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...+.. +....+..+... . ...
T Consensus 196 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~i~~~~~~-------~---p~~ 260 (350)
T 1rdq_E 196 --WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGKVR-------F---PSH 260 (350)
T ss_dssp --CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCCCC-------C---CTT
T ss_pred --ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH---HHHHHHHcCCCC-------C---CCC
Confidence 2356899999999999999999999999999999999999999765432 223333222110 0 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPE-----VLQVVQQL 557 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps-----~~ev~~~L 557 (580)
. ..++.+++.+||+.||++||+ +.|+++|-
T Consensus 261 ~---~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 261 F---SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp C---CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred C---CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 1 235668888999999999998 88888764
No 90
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7e-42 Score=350.17 Aligned_cols=250 Identities=18% Similarity=0.323 Sum_probs=198.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc---cHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK---GQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|+.. +++.||+|+++..... ....+.+|..++.++ +||||+++++++.+ .+..++||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~lV~ 132 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFVI 132 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-CCEEEEEE
Confidence 566789999999999999986 6889999999754322 234578899999887 89999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 133 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~- 207 (396)
T 4dc2_A 133 EYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 207 (396)
T ss_dssp ECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred EcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCCCEEEeecceeeecccCC-
Confidence 999999999999875 3689999999999999999999994 99999999999999999999999999997533222
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCC-----hhHHHHHHhhhhccccccchhh
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE-----LPQWVASIVKEEWTNEVFDLEL 518 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+...+..... ..
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~ 281 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RI 281 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------CC
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------CC
Confidence 22334679999999999999999999999999999999999999997543221 11112221111110 00
Q ss_pred hccCCCcHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 008031 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEV------LQVVQQ 556 (580)
Q Consensus 519 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~------~ev~~~ 556 (580)
+.. ...++.+++.+||+.||++||++ .|+++|
T Consensus 282 ---p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 282 ---PRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp ---CTT---SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred ---CCc---CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 111 12356688889999999999985 566665
No 91
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.1e-43 Score=373.41 Aligned_cols=255 Identities=24% Similarity=0.387 Sum_probs=208.7
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+++
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~e~~~~ 345 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSK 345 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTT
T ss_pred hhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEeeehhcC
Confidence 56678999999999999999888889999997643 345689999999999999999999999864 578999999999
Q ss_pred CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccceee
Q 008031 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIA 448 (580)
Q Consensus 369 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 448 (580)
|+|.++++... ...+++.+++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++............
T Consensus 346 gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 346 GSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp EEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred CcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 99999997532 23589999999999999999999994 99999999999999999999999999998765433222233
Q ss_pred ecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 449 TAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 449 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
..++..|+|||.+.+..++.++|||||||++|||++ |+.||.+....+....+. . .... ......
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~---~-~~~~--------~~~~~~-- 489 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE---R-GYRM--------PCPPEC-- 489 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH---T-TCCC--------CCCTTC--
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---c-CCCC--------CCCCCC--
Confidence 456788999999998999999999999999999999 999998765433333221 1 1110 011112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
...+.++|.+||+.||++|||+.++++.|+.+...
T Consensus 490 -~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 490 -PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred -CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 23567888999999999999999999999998644
No 92
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-42 Score=345.60 Aligned_cols=257 Identities=23% Similarity=0.435 Sum_probs=199.4
Q ss_pred HhhhccccccCceEEEEEEeCC-----CCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLED-----GSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
|...+.||+|+||.||+|.+.. +..||+|.++.... .....+.+|+.++++++||||+++++++.. .+..++|
T Consensus 46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 124 (333)
T 1mqb_A 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPMMII 124 (333)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEE
T ss_pred hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-CCCcEEE
Confidence 4557899999999999998752 23599999875433 234568999999999999999999999976 6689999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 125 TEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp EECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 9999999999999864 24689999999999999999999995 99999999999999999999999999998765432
Q ss_pred cc--ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 443 NV--NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 443 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
.. ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+....+ ......
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~---~~~~~~--------- 269 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI---NDGFRL--------- 269 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HTTCCC---------
T ss_pred ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH---HCCCcC---------
Confidence 21 1222346788999999998999999999999999999999 99999765533322222 111110
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
..... ....+.+++.+||+.||++|||+.++++.|+++....
T Consensus 270 ~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 270 PTPMD---CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp CCCTT---CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred CCccc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 00111 1235678888999999999999999999999976543
No 93
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.9e-42 Score=359.04 Aligned_cols=254 Identities=19% Similarity=0.252 Sum_probs=202.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.++||+|+||.||+|.+. +++.||+|+++.... .....+.+|+.++..++||||+++++++.+ .+..++|||
T Consensus 76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-~~~~~lV~E 154 (437)
T 4aw2_A 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD-DNNLYLVMD 154 (437)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-SSEEEEEEC
T ss_pred eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-CCEEEEEEe
Confidence 456789999999999999987 578999999865321 223348899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++... ...+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+++........
T Consensus 155 y~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~-~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~ 231 (437)
T 4aw2_A 155 YYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231 (437)
T ss_dssp CCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred cCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc
Confidence 99999999999863 2468999999999999999999999 49999999999999999999999999999876554444
Q ss_pred ceeeecCccccCCccccc-----cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 445 NVIATAGALGYRAPELSK-----LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
......||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+. ...+....... ...
T Consensus 232 ~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~-----~~p 303 (437)
T 4aw2_A 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---YGKIMNHKERF-----QFP 303 (437)
T ss_dssp ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHC-----CCC
T ss_pred ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH---HHhhhhccccc-----cCC
Confidence 444467999999999986 56789999999999999999999999986543333 23332211100 000
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHHH
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSA--RPEVLQVVQQL 557 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~ev~~~L 557 (580)
....... .++.+++.+||..+|++ ||++.|+++|=
T Consensus 304 ~~~~~~s---~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 304 TQVTDVS---ENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp SSCCCSC---HHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred cccccCC---HHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 0111122 35667888999888888 99999999873
No 94
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2e-42 Score=338.34 Aligned_cols=248 Identities=31% Similarity=0.480 Sum_probs=190.5
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccc----ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT----KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|...+.||+|+||.||+|.+. |+.||||+++.... ...+.+.+|+++++.++||||+++++++.. ++..++|||
T Consensus 9 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 86 (271)
T 3dtc_A 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-EPNLCLVME 86 (271)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-C--CEEEEE
T ss_pred eeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-CCceEEEEE
Confidence 456789999999999999986 88999999865432 234678999999999999999999999976 568899999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC---cccCCCCCCCeeeCC--------CCCeEEeecc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN---IIHGNLTSSNVLLDD--------STNAKISDFG 433 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~---i~H~Dlk~~Nil~~~--------~~~~kl~Dfg 433 (580)
|+++++|.+++.. ..+++..+..++.|++.||+|||+. | |+||||||+||+++. ++.+||+|||
T Consensus 87 ~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 87 FARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp CCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred cCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 9999999999864 3689999999999999999999995 8 899999999999986 6789999999
Q ss_pred cccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccc
Q 008031 434 LSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV 513 (580)
Q Consensus 434 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (580)
++........ ....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...+...... .........
T Consensus 162 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~-- 233 (271)
T 3dtc_A 162 LAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY---GVAMNKLAL-- 233 (271)
T ss_dssp C----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH---HHHTSCCCC--
T ss_pred cccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---hhhcCCCCC--
Confidence 9986544322 23468999999999999999999999999999999999999997654322111 111111100
Q ss_pred cchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 008031 514 FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560 (580)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~ 560 (580)
.. ... ....+.+++.+||+.||++|||+.|++++|+++
T Consensus 234 ---~~---~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 ---PI---PST---CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ---CC---CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ---CC---Ccc---cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00 111 123567888899999999999999999999864
No 95
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3e-42 Score=347.31 Aligned_cols=251 Identities=21% Similarity=0.351 Sum_probs=197.7
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC--------
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKG-------- 357 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-------- 357 (580)
.|...+.||+|+||.||+|.+. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+...
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 4667899999999999999987 899999999864433 345679999999999999999999999865321
Q ss_pred ------------------------------------------------cEEEEEeeCCCCChhhhhhhcCCCCCCCHHHH
Q 008031 358 ------------------------------------------------EKLLVFDYMPHGSLATFLHARGPETPIDWPTR 389 (580)
Q Consensus 358 ------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~ 389 (580)
..++||||+++|+|.+++.........++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 166 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence 37999999999999999988765556777789
Q ss_pred HHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc-----------cceeeecCccccCCc
Q 008031 390 MKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN-----------VNVIATAGALGYRAP 458 (580)
Q Consensus 390 ~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~g~~~y~aP 458 (580)
..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++....... .......||+.|+||
T Consensus 167 ~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 99999999999999994 999999999999999999999999999987654321 122234699999999
Q ss_pred cccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhh
Q 008031 459 ELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALH 538 (580)
Q Consensus 459 E~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 538 (580)
|.+.+..++.++||||+||++|||++|..|+.. ............ . .........++.+++.+
T Consensus 246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNLK-----F-------PLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHTTC-----C-------CHHHHHHCHHHHHHHHH
T ss_pred HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhccC-----C-------CcccccCChhHHHHHHH
Confidence 999999999999999999999999998776421 111111111100 0 00111223456789999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 008031 539 CVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 539 cl~~~P~~Rps~~ev~~~ 556 (580)
||+.||++|||+.|++++
T Consensus 309 ~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHCSSGGGSCCHHHHHHS
T ss_pred HccCCCCcCCCHHHHhhc
Confidence 999999999999999875
No 96
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4e-42 Score=339.41 Aligned_cols=258 Identities=27% Similarity=0.447 Sum_probs=192.9
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|.+.+.||+|+||.||+|.+. ..||+|+++.... ...+.+.+|+.++++++||||+++++++. ....++||||+
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e~~ 101 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAIVTQWC 101 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEECC
T ss_pred eeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--CCccEEEEEec
Confidence 556799999999999999875 3599999865432 23467899999999999999999999764 45789999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc-ccc
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA-NVN 445 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 445 (580)
++++|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....... ...
T Consensus 102 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 102 EGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred CCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999999754 34689999999999999999999994 99999999999999999999999999997654322 222
Q ss_pred eeeecCccccCCccccc---cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccC
Q 008031 446 VIATAGALGYRAPELSK---LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDA 522 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (580)
.....||+.|+|||.+. +..++.++||||+|+++|+|++|+.||......+ .+.......... +......
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~----~~~~~~~ 251 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD---QIIEMVGRGSLS----PDLSKVR 251 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH---HHHHHHHHTSCC----CCTTSSC
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH---HHHHHhcccccC----cchhhcc
Confidence 33456899999999886 6678889999999999999999999997654332 112222111111 1110001
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 523 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
.. ....+.+++.+||+.||++|||+.++++.|+++.++
T Consensus 252 ~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 252 SN---CPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred cc---CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 11 123667888899999999999999999999998653
No 97
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.4e-42 Score=348.27 Aligned_cols=246 Identities=22% Similarity=0.339 Sum_probs=200.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|... +|+.||||+++... ....+.+..|..++..+ +||+|+++++++.. .+..++||
T Consensus 22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~lv~ 100 (353)
T 2i0e_A 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLYFVM 100 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-CCEEEEEE
Confidence 556789999999999999987 58899999987542 23456688999999998 89999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++|+|.+++...+ .+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 101 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 175 (353)
T 2i0e_A 101 EYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG- 175 (353)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC-
Confidence 9999999999998753 589999999999999999999995 99999999999999999999999999998543222
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+. ...+...... . ..
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~---~~~i~~~~~~-------~---p~ 242 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---FQSIMEHNVA-------Y---PK 242 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHCCCC-------C---CT
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH---HHHHHhCCCC-------C---CC
Confidence 223346799999999999999999999999999999999999999976543332 2233222110 0 11
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPE-----VLQVVQQ 556 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps-----~~ev~~~ 556 (580)
.. ..++.+++.+||+.||++||+ +.++++|
T Consensus 243 ~~---s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 243 SM---SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp TS---CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CC---CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11 235668888999999999995 5777766
No 98
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-41 Score=339.89 Aligned_cols=260 Identities=19% Similarity=0.293 Sum_probs=196.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccccc---HHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKG---QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. +++.||+|++....... .+.+.+|+.++++++||||+++++++.. ++..++|||
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 114 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLYVDMR 114 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEEEEEE
Confidence 566799999999999999986 78899999987553332 3568899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.........
T Consensus 115 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 190 (309)
T 2h34_A 115 LINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT 190 (309)
T ss_dssp CCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred ecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCCCCEEEecCccCccccccccc
Confidence 99999999999875 3689999999999999999999995 9999999999999999999999999999876554333
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+.. .+.......... .... .+.
T Consensus 191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~---~~~~---~~~ 260 (309)
T 2h34_A 191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS----VMGAHINQAIPR---PSTV---RPG 260 (309)
T ss_dssp ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH----HHHHHHHSCCCC---GGGT---STT
T ss_pred cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH----HHHHHhccCCCC---cccc---CCC
Confidence 334456899999999999999999999999999999999999999764322 222222111110 0011 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHhhhcccccc
Q 008031 525 IGDELLNTLKLALHCVDPSPSARP-EVLQVVQQLEEIRPEAAT 566 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rp-s~~ev~~~L~~~~~~~~~ 566 (580)
.+ .++.+++.+||+.||++|| |+.++++.|+++......
T Consensus 261 ~~---~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 261 IP---VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp CC---THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred CC---HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 11 2566788899999999999 999999999998765543
No 99
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-42 Score=349.40 Aligned_cols=264 Identities=21% Similarity=0.302 Sum_probs=205.7
Q ss_pred HHHhhhccccccCceEEEEEEe------CCCCEEEEEEcccccc-ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCc
Q 008031 287 LLCATAEIMGKSTYGTVYKATL------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGE 358 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 358 (580)
..|.+.+.||+|+||.||+|.+ .++..||+|+++.... ...+.+.+|+.+++++ +||||+++++++.. .+.
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~ 123 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-SGP 123 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSS
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-CCc
Confidence 3466789999999999999986 2456899999975432 3446789999999999 89999999999986 668
Q ss_pred EEEEEeeCCCCChhhhhhhcCCC--------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCC
Q 008031 359 KLLVFDYMPHGSLATFLHARGPE--------------------TPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSN 418 (580)
Q Consensus 359 ~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~N 418 (580)
.++||||+++|+|.+++...... ..+++..+..++.||+.||+|||+. ||+||||||+|
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~N 202 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARN 202 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhh
Confidence 99999999999999999865321 2478999999999999999999994 99999999999
Q ss_pred eeeCCCCCeEEeecccccccccccccc-eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCC
Q 008031 419 VLLDDSTNAKISDFGLSRLMTAAANVN-VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAE 496 (580)
Q Consensus 419 il~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~ 496 (580)
|+++.++.+||+|||++.......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |..||......+
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 282 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence 999999999999999998665433222 223457788999999998999999999999999999998 999998765433
Q ss_pred hhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccccc
Q 008031 497 LPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAAT 566 (580)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~ 566 (580)
.. .......... . ..... ..++.+++.+||+.||.+|||+.+++++|+.+......
T Consensus 283 ~~---~~~~~~~~~~-----~---~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 283 NF---YKLIQNGFKM-----D---QPFYA---TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp HH---HHHHHTTCCC-----C---CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred HH---HHHHhcCCCC-----C---CCCCC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 22 1222221110 0 01111 23567788899999999999999999999998765543
No 100
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.4e-42 Score=343.02 Aligned_cols=265 Identities=23% Similarity=0.346 Sum_probs=192.0
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
.|...+.||+|+||.||+|.+. +|+.||+|+++.... .....+.+|++++++++||||+++++++.. ++..++||||
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~ 84 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-ENKLTLVFEF 84 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-TTEEEEEEEC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-CCeEEEEEEe
Confidence 3667899999999999999976 789999999865432 234678899999999999999999999976 6689999999
Q ss_pred CCCCChhhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 366 MPHGSLATFLHARG---PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 366 ~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
++ |+|.+++.... ....+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 97 59999987542 123589999999999999999999994 99999999999999999999999999998664332
Q ss_pred ccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc--------c
Q 008031 443 NVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE--------V 513 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~ 513 (580)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+....+........... .
T Consensus 163 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 163 N-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp C-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred c-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence 2 2223468999999999876 4689999999999999999999999987665444333332221100000 0
Q ss_pred cchhhhccCC-CcH---------HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 514 FDLELMRDAP-TIG---------DELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 514 ~~~~~~~~~~-~~~---------~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..+......+ ... ....++.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000000 000 112367789999999999999999999986
No 101
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.4e-42 Score=334.57 Aligned_cols=251 Identities=26% Similarity=0.389 Sum_probs=202.1
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECC-CCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGP-KGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~~lv~e~ 365 (580)
|...+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|+.++++++||||+++++++... .+..++||||
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 12 LNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred hHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 556789999999999999986 88999999875432 3345789999999999999999999999864 2578999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN--IIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~--i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
+++|+|.++++... ...+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++++|||++......
T Consensus 91 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~-- 166 (271)
T 3kmu_A 91 MPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-- 166 (271)
T ss_dssp CTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT--
T ss_pred cCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeeccc--
Confidence 99999999998743 33589999999999999999999994 8 999999999999999999999999887543222
Q ss_pred cceeeecCccccCCccccccCCCCC---cccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 444 VNVIATAGALGYRAPELSKLKKANT---KTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
...||+.|+|||.+.+..++. ++||||||+++|||++|+.||...+..+.. .......... ..
T Consensus 167 ----~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~-----~~-- 232 (271)
T 3kmu_A 167 ----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG---MKVALEGLRP-----TI-- 232 (271)
T ss_dssp ----TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH---HHHHHSCCCC-----CC--
T ss_pred ----CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH---HHHHhcCCCC-----CC--
Confidence 235789999999988765555 799999999999999999999765433221 2222111111 11
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcc
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRP 562 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~ 562 (580)
.... ..++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 233 -~~~~---~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 -PPGI---SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -CTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -CCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1111 2356788889999999999999999999999875
No 102
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.5e-42 Score=334.95 Aligned_cols=250 Identities=20% Similarity=0.293 Sum_probs=203.5
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
.|.+.+.||+|+||.||+|.+. ++..||+|++........+.+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 88 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-NTDIYLVMELC 88 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeEEEEEecc
Confidence 4677899999999999999986 678999999987666667889999999999999999999999986 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee---CCCCCeEEeecccccccccccc
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
++++|.+++... ..+++..+..++.|++.||+|||+. |++||||||+||++ +.++.+||+|||++........
T Consensus 89 ~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 89 TGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp CSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 999999998764 3589999999999999999999994 99999999999999 7888999999999986654332
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.....||+.|+|||.+.+ .++.++||||+|+++|+|++|+.||......+... .+...... .......
T Consensus 165 --~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~---~~~~~~~--- 232 (277)
T 3f3z_A 165 --MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML---KIREGTFT---FPEKDWL--- 232 (277)
T ss_dssp --BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCC---CCHHHHT---
T ss_pred --hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH---HHHhCCCC---CCchhhh---
Confidence 233568999999999875 48999999999999999999999997654332222 22221110 0000000
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
. ....+.+++.+||+.||++|||+.+++++-
T Consensus 233 ~---~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 263 (277)
T 3f3z_A 233 N---VSPQAESLIRRLLTKSPKQRITSLQALEHE 263 (277)
T ss_dssp T---SCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred c---CCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 1 123567888999999999999999998753
No 103
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.3e-42 Score=353.20 Aligned_cols=273 Identities=19% Similarity=0.297 Sum_probs=214.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC-cEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKG-EKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~lv~e~ 365 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|++++++++||||+++++++..... ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 556799999999999999987 699999999975432 345678899999999999999999999986433 67999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee----CCCCCeEEeecccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL----DDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~----~~~~~~kl~Dfg~~~~~~~~ 441 (580)
+++|+|.+++........+++..++.++.||+.||+|||+. ||+||||||+||++ +.++.+||+|||+++.....
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 99999999998765445599999999999999999999994 99999999999999 77778999999999876543
Q ss_pred cccceeeecCccccCCcccccc--------CCCCCcccchhHHHHHHHHHcCCCCCCCCCCC-ChhHHHHHHhhhhcccc
Q 008031 442 ANVNVIATAGALGYRAPELSKL--------KKANTKTDVYSLGVTILELLTGKSPGEPLNGA-ELPQWVASIVKEEWTNE 512 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 512 (580)
.. .....||..|+|||++.+ ..++.++|||||||++|||++|+.||.+.... .....+..+..+.....
T Consensus 170 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 170 EQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp GG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred Cc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 32 223568999999998765 56778999999999999999999999765432 23333444433322111
Q ss_pred cc------------chhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 513 VF------------DLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 513 ~~------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
+. .................+.+++.+||+.||++|||+.|+++.++++....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 00 00111111222445566778999999999999999999999999986543
No 104
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.1e-42 Score=343.40 Aligned_cols=251 Identities=23% Similarity=0.371 Sum_probs=198.9
Q ss_pred HhhhccccccCceEEEEEEeC-CC-------CEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DG-------SQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
|.+.+.||+|+||.||+|.+. ++ ..||+|++........+.+.+|+.++++++||||+++++++.. ++..+
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 88 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC-GDENI 88 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-TTCCE
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-CCCCE
Confidence 566789999999999999875 33 4799999977666667789999999999999999999999986 56889
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC--------eEEeec
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN--------AKISDF 432 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~--------~kl~Df 432 (580)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .||+||||||+||+++.++. +||+||
T Consensus 89 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 89 LVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEE-NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhh-CCeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 9999999999999998752 348999999999999999999999 49999999999999998877 999999
Q ss_pred ccccccccccccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCC-CCCCCCCCChhHHHHHHhhhhcc
Q 008031 433 GLSRLMTAAANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKS-PGEPLNGAELPQWVASIVKEEWT 510 (580)
Q Consensus 433 g~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~ 510 (580)
|++....... ...+++.|+|||.+.+ ..++.++||||||+++|||++|.. ||...+... ... ......
T Consensus 166 g~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~---~~~-~~~~~~- 235 (289)
T 4fvq_A 166 GISITVLPKD-----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR---KLQ-FYEDRH- 235 (289)
T ss_dssp CSCTTTSCHH-----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHH-HHHTTC-
T ss_pred cccccccCcc-----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH---HHH-HhhccC-
Confidence 9987654322 2347888999999887 778999999999999999999554 444332211 111 111100
Q ss_pred ccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 511 NEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
...... ..++.+++.+||+.||++|||+.|++++|+++.....
T Consensus 236 ------~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 236 ------QLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp ------CCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred ------CCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 000001 1246688889999999999999999999999876443
No 105
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.1e-41 Score=337.47 Aligned_cols=268 Identities=16% Similarity=0.184 Sum_probs=212.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|...+.||+|+||.||+|.+. +|+.||||++.... ....+.+|+.+++.++|++++..+.++.......++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 556789999999999999974 79999999986543 23468899999999999988888888766677889999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC---CCCCeEEeeccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD---DSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+++|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++ .++.+||+|||++.........
T Consensus 88 ~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 88 GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 999999997542 4689999999999999999999995 999999999999994 7889999999999876544321
Q ss_pred ------ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhh
Q 008031 445 ------NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518 (580)
Q Consensus 445 ------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+..+....+........ ....
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 242 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP--IEVL 242 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--HHHH
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc--hHHH
Confidence 12345789999999999999999999999999999999999999987655443333333222211100 0000
Q ss_pred hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccCC
Q 008031 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAATS 570 (580)
Q Consensus 519 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~~ 570 (580)
....+ .++.+++.+||+.||++|||+.++++.|+++..+.......
T Consensus 243 ---~~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~ 288 (296)
T 3uzp_A 243 ---CKGYP---SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDY 288 (296)
T ss_dssp ---TTTSC---HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSC
T ss_pred ---HhhCC---HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccc
Confidence 01111 35678888999999999999999999999987766554443
No 106
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.8e-42 Score=344.80 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=192.0
Q ss_pred HhhhccccccCceEEEEEEe----CCCCEEEEEEccccc----cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 289 CATAEIMGKSTYGTVYKATL----EDGSQVAVKRLREKI----TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
|.+.+.||+|+||.||+|.. .+|+.||+|+++... ......+.+|+.++++++||||+++++++.. .+..+
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~ 97 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-GGKLY 97 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC-SSCEE
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc-CCEEE
Confidence 56789999999999999987 478999999997543 1234567889999999999999999999987 66899
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 98 LILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999864 3588999999999999999999995 999999999999999999999999999875433
Q ss_pred ccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 441 AANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+ .+..+......
T Consensus 174 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~---------- 239 (327)
T 3a62_A 174 DGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK---TIDKILKCKLN---------- 239 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHTCCC----------
T ss_pred CCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHhCCCC----------
Confidence 221 2223568999999999999999999999999999999999999997654322 22222222110
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARP-----EVLQVVQQL 557 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~ev~~~L 557 (580)
..+.. ..++.+++.+||+.||++|| ++.|+++|-
T Consensus 240 ~p~~~---~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 240 LPPYL---TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp CCTTS---CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred CCCCC---CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 01111 23566788899999999999 778888763
No 107
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3e-42 Score=347.62 Aligned_cols=262 Identities=26% Similarity=0.392 Sum_probs=208.0
Q ss_pred HHHhhhccccccCceEEEEEEeC--------CCCEEEEEEcccccc-ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCC
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE--------DGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGPK 356 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 356 (580)
..|.+.+.||+|+||.||+|.+. ++..||+|+++.... ...+.+.+|+++++++ +||||+++++++.. .
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~ 113 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 113 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-C
Confidence 34667899999999999999863 467899999975433 3345788999999999 89999999999976 6
Q ss_pred CcEEEEEeeCCCCChhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC
Q 008031 357 GEKLLVFDYMPHGSLATFLHARGP-------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD 423 (580)
Q Consensus 357 ~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~ 423 (580)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTE 192 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCccceEEEcC
Confidence 689999999999999999986532 23489999999999999999999995 9999999999999999
Q ss_pred CCCeEEeeccccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHH
Q 008031 424 STNAKISDFGLSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWV 501 (580)
Q Consensus 424 ~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~ 501 (580)
++.+||+|||++......... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......+....+
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 272 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272 (334)
T ss_dssp TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHH
Confidence 999999999999866543221 2223456788999999988899999999999999999999 99999765433322222
Q ss_pred HHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 502 ASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
. ..... . ..... ..++.+++.+||+.||.+|||+.|++++|+++.....
T Consensus 273 ~---~~~~~-~--------~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 273 K---EGHRM-D--------KPANC---TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp H---HTCCC-C--------CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred h---cCCCC-C--------CCccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 1 11110 0 01111 2356788889999999999999999999999875443
No 108
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=7.5e-42 Score=338.68 Aligned_cols=268 Identities=16% Similarity=0.192 Sum_probs=211.6
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
.|...+.||+|+||.||+|.+. +++.||||++.... ....+.+|+.+++.++|++++..++++....+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 3667899999999999999974 78999999865432 22457889999999999998888888876677889999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee---CCCCCeEEeecccccccccccc
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
+++|.+++.... ..+++..+..++.||+.||+|||+. ||+||||||+||++ ++++.+||+|||+++.......
T Consensus 88 -~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 88 -GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp -CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999999998542 4589999999999999999999995 99999999999999 7889999999999987654332
Q ss_pred c------ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchh
Q 008031 444 V------NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517 (580)
Q Consensus 444 ~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (580)
. ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.........+.+............ ..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~ 241 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI--EV 241 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH--HH
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh--hh
Confidence 1 122456899999999999999999999999999999999999999876655544444433322211100 00
Q ss_pred hhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccC
Q 008031 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAAT 569 (580)
Q Consensus 518 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~ 569 (580)
. .... ..++.+++.+||+.||++|||+.++++.|+++..+......
T Consensus 242 ~---~~~~---~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~ 287 (296)
T 4hgt_A 242 L---CKGY---PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287 (296)
T ss_dssp H---TTTS---CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTT
T ss_pred h---hccC---CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcc
Confidence 0 0111 13567888899999999999999999999998766554443
No 109
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.7e-41 Score=342.60 Aligned_cols=250 Identities=18% Similarity=0.324 Sum_probs=198.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc---cHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK---GQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|...+.||+|+||.||+|++. +++.||+|+++..... ..+.+.+|..++.++ +||||+++++++.+ .+..++||
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~lv~ 89 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFVI 89 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-CCEEEEEE
Confidence 556789999999999999986 6889999999754322 234578899999988 89999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 90 e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~- 164 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 164 (345)
T ss_dssp CCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-
T ss_pred eCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEEeccccccccCCC-
Confidence 999999999999864 3689999999999999999999994 99999999999999999999999999997543222
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCC-----hhHHHHHHhhhhccccccchhh
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE-----LPQWVASIVKEEWTNEVFDLEL 518 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+...+..... ..
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~ 238 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RI 238 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------CC
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------CC
Confidence 22334579999999999999999999999999999999999999997532211 11111111111110 00
Q ss_pred hccCCCcHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 008031 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEV------LQVVQQ 556 (580)
Q Consensus 519 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~------~ev~~~ 556 (580)
... ...++.+++.+||+.||++||++ .|+++|
T Consensus 239 ---p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 239 ---PRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ---CTT---SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ---CCC---CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 111 12356788889999999999995 677665
No 110
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-42 Score=338.38 Aligned_cols=259 Identities=25% Similarity=0.381 Sum_probs=208.4
Q ss_pred ccccccCceEEEEEEeC---CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 293 EIMGKSTYGTVYKATLE---DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
+.||+|+||.||+|.+. ++..||+|+++.... ...+.+.+|++++++++||||+++++++. .+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--CCCcEEEEEeCCC
Confidence 48999999999999864 577899999976433 34567899999999999999999999995 4579999999999
Q ss_pred CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc--ce
Q 008031 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV--NV 446 (580)
Q Consensus 369 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~ 446 (580)
++|.+++... ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++......... ..
T Consensus 94 ~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (287)
T 1u59_A 94 GPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170 (287)
T ss_dssp EEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCC
T ss_pred CCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecc
Confidence 9999999754 34689999999999999999999995 9999999999999999999999999999876443222 11
Q ss_pred eeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 447 IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+....+.. .... . ..+..
T Consensus 171 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~---~~~~------~---~~~~~ 238 (287)
T 1u59_A 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ---GKRM------E---CPPEC 238 (287)
T ss_dssp CSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT---TCCC------C---CCTTC
T ss_pred ccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc---CCcC------C---CCCCc
Confidence 22346789999999998899999999999999999999 9999987665443332221 1110 0 01111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccCCC
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAATSS 571 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~~~ 571 (580)
..++.+++.+||+.||++|||+.+++++|+++........+..
T Consensus 239 ---~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~ 281 (287)
T 1u59_A 239 ---PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGH 281 (287)
T ss_dssp ---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCC
Confidence 2356678889999999999999999999999876665554443
No 111
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-41 Score=338.78 Aligned_cols=264 Identities=25% Similarity=0.355 Sum_probs=201.1
Q ss_pred HHHhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcC--CCCcceeeeeEEECCC---CcEEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKI--RHPNLLALRAYYLGPK---GEKLL 361 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~---~~~~l 361 (580)
-.|.+.+.||+|+||.||+|.+. ++.||||++... ....+.+|.+++... +||||+++++++.... ...++
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 35778899999999999999987 899999998543 234455566666655 8999999999998643 57899
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------CcccCCCCCCCeeeCCCCCeEEeecc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE--------NIIHGNLTSSNVLLDDSTNAKISDFG 433 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------~i~H~Dlk~~Nil~~~~~~~kl~Dfg 433 (580)
||||+++|+|.++++.. .+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||
T Consensus 113 v~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~-~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHT-EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp EECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHS-CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHH-hhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 99999999999999764 58999999999999999999998 5 99999999999999999999999999
Q ss_pred cccccccccccc---eeeecCccccCCccccccCCCCCc------ccchhHHHHHHHHHcC----------CCCCCCCCC
Q 008031 434 LSRLMTAAANVN---VIATAGALGYRAPELSKLKKANTK------TDVYSLGVTILELLTG----------KSPGEPLNG 494 (580)
Q Consensus 434 ~~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~s~G~~l~el~tg----------~~p~~~~~~ 494 (580)
++.......... .....||+.|+|||++.+..++.+ +|||||||++|||++| +.||.....
T Consensus 188 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~ 267 (337)
T 3mdy_A 188 LAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267 (337)
T ss_dssp TCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence 997664433221 123468999999999987777665 9999999999999999 666655432
Q ss_pred CC-hhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 495 AE-LPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 495 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
.. ...................... .......++.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 268 SDPSYEDMREIVCIKKLRPSFPNRW-----SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGG-----GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCCchhhhHHHHhhhccCccccccc-----hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 22 1122222211111111111000 11245567889999999999999999999999999987654
No 112
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.3e-41 Score=339.26 Aligned_cols=251 Identities=23% Similarity=0.369 Sum_probs=204.0
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc------cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK------GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEK 359 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 359 (580)
-.|.+.+.||+|+||.||+|.+. +|+.||+|.++..... ..+.+.+|+.++++++||||+++++++.. .+..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 90 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDV 90 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEE
Confidence 45778899999999999999986 7899999998654322 35679999999999999999999999987 6689
Q ss_pred EEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC----CeEEeecccc
Q 008031 360 LLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST----NAKISDFGLS 435 (580)
Q Consensus 360 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~----~~kl~Dfg~~ 435 (580)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999764 3689999999999999999999995 999999999999999887 7999999999
Q ss_pred cccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccc
Q 008031 436 RLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFD 515 (580)
Q Consensus 436 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (580)
........ .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||......+. ...+..... ..+
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~---~~~ 238 (321)
T 2a2a_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LANITSVSY---DFD 238 (321)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHHHTTCC---CCC
T ss_pred eecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHHhccc---ccC
Confidence 87654322 2335689999999999999999999999999999999999999976543222 222221111 111
Q ss_pred hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 516 LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 516 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
....... ...+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEFFSHT------SELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHTTC------CHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhhhccc------CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111 1356788999999999999999999986
No 113
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.7e-42 Score=342.39 Aligned_cols=261 Identities=26% Similarity=0.354 Sum_probs=209.3
Q ss_pred HHhhhccccccCceEEEEEEe------CCCCEEEEEEcccccc-ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcE
Q 008031 288 LCATAEIMGKSTYGTVYKATL------EDGSQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEK 359 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 359 (580)
.|...+.||+|+||.||+|.+ .+++.||+|+++.... ...+.+.+|+.+++++ +||||+++++++.. .+..
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~ 102 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-GGPT 102 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSC
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-CCCc
Confidence 466789999999999999985 2567899999975533 2346789999999999 99999999999976 6689
Q ss_pred EEEEeeCCCCChhhhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC
Q 008031 360 LLVFDYMPHGSLATFLHARGP---------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS 424 (580)
Q Consensus 360 ~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~ 424 (580)
++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. |++||||||+||+++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEcCC
Confidence 999999999999999987532 12589999999999999999999995 99999999999999999
Q ss_pred CCeEEeecccccccccccccc-eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHH
Q 008031 425 TNAKISDFGLSRLMTAAANVN-VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVA 502 (580)
Q Consensus 425 ~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~ 502 (580)
+.+||+|||++.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......... .
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~ 258 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF---Y 258 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH---H
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH---H
Confidence 999999999998765443322 122346788999999998999999999999999999999 99999876543222 2
Q ss_pred HHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 503 SIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
.......... ..... ...+.+++.+||+.||.+|||+.|++++|+++..+.
T Consensus 259 ~~~~~~~~~~--------~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 259 KMIKEGFRML--------SPEHA---PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHTCCCC--------CCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHhccCCCCC--------CcccC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 2222111100 01111 235678888999999999999999999999987654
No 114
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.6e-42 Score=338.02 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=196.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|...+.||+|+||.||+|.+. +|+.||+|+++..... ....+.+|+.++++++||||+++++++.. ++..++||||
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 82 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFEF 82 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-CCEEEEEEec
Confidence 456789999999999999986 7899999998654332 23678899999999999999999999986 6689999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
+++ ++.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....... .
T Consensus 83 ~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 157 (292)
T 3o0g_A 83 CDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-C 157 (292)
T ss_dssp CSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-C
T ss_pred CCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-c
Confidence 975 666666543 24689999999999999999999995 999999999999999999999999999986643322 2
Q ss_pred eeeecCccccCCccccccCC-CCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhh---hccccccchhh---
Q 008031 446 VIATAGALGYRAPELSKLKK-ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE---EWTNEVFDLEL--- 518 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--- 518 (580)
.....||+.|+|||++.+.. ++.++||||+||++|||++|..||.... +....+..+... .....+.....
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN--DVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS--SHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC--CHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 23456899999999987665 8999999999999999999888854322 222222222211 00000000000
Q ss_pred ----------hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 519 ----------MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 519 ----------~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
............++.+++.+||+.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000001122356688889999999999999999875
No 115
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=369.44 Aligned_cols=251 Identities=25% Similarity=0.390 Sum_probs=201.6
Q ss_pred cccccCceEEEEEEeC---CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 294 IMGKSTYGTVYKATLE---DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 294 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
.||+|+||.||+|.+. ++..||||+++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEEEEeCCCC
Confidence 7999999999999874 456799999976543 345789999999999999999999999975 4699999999999
Q ss_pred ChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccc--ee
Q 008031 370 SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVN--VI 447 (580)
Q Consensus 370 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~ 447 (580)
+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......... ..
T Consensus 421 ~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 421 PLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp BHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred cHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 999999764 34689999999999999999999994 99999999999999999999999999998764432221 12
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||...+..+....+.. +... ...+..
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~---~~~~---------~~p~~~- 564 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ---GKRM---------ECPPEC- 564 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT---TCCC---------CCCTTC-
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc---CCCC---------CCCCcC-
Confidence 2345688999999999999999999999999999998 9999988765544433322 1110 011112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
..++.++|.+||+.||++|||+.++++.|+.+....
T Consensus 565 --~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 565 --PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp --CHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 235678888999999999999999999999976443
No 116
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=354.25 Aligned_cols=253 Identities=18% Similarity=0.226 Sum_probs=201.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|... +|+.||||+++.... .....+.+|..++..++||||+++++++.+ .+..|+|||
T Consensus 63 f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-~~~~~lVmE 141 (412)
T 2vd5_A 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD-ENYLYLVME 141 (412)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC-SSEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEEc
Confidence 456789999999999999986 799999999865321 223458899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++.+.+ ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++++||+|||+++........
T Consensus 142 ~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~ 218 (412)
T 2vd5_A 142 YYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218 (412)
T ss_dssp CCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred CCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCCCCEEEeechhheeccCCCcc
Confidence 999999999998652 3689999999999999999999994 9999999999999999999999999999876554443
Q ss_pred ceeeecCccccCCccccc-------cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchh
Q 008031 445 NVIATAGALGYRAPELSK-------LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (580)
......||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+.. ..+........ .+.
T Consensus 219 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~---~~i~~~~~~~~--~p~ 293 (412)
T 2vd5_A 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY---GKIVHYKEHLS--LPL 293 (412)
T ss_dssp ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHTHHHHCC--CC-
T ss_pred ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH---HHHHhcccCcC--CCc
Confidence 333457999999999987 467899999999999999999999999765543322 22222111000 000
Q ss_pred hhccCCCcHHHHHHHHHHHhhccCCCCCCC---CCHHHHHHHH
Q 008031 518 LMRDAPTIGDELLNTLKLALHCVDPSPSAR---PEVLQVVQQL 557 (580)
Q Consensus 518 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---ps~~ev~~~L 557 (580)
. .... ..++.+++.+||. +|++| |++.|+++|=
T Consensus 294 ~---~~~~---s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp 329 (412)
T 2vd5_A 294 V---DEGV---PEEARDFIQRLLC-PPETRLGRGGAGDFRTHP 329 (412)
T ss_dssp ------CC---CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred c---ccCC---CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence 0 0111 2356678889999 99998 5899998874
No 117
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.9e-42 Score=344.17 Aligned_cols=258 Identities=22% Similarity=0.347 Sum_probs=193.8
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccccc---HHHHHHHHHHHhcCCCCcceeeeeEEECCCC---cEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKG---QREFESEVSLLGKIRHPNLLALRAYYLGPKG---EKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++...... ...+.+|+.++++++||||+++++++..... ..++
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 566799999999999999974 78999999997653332 3468899999999999999999999875322 2489
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+++++|.++++..+ .+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++......
T Consensus 94 v~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp EEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH-CCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 999999999999998653 68999999999999999999999 49999999999999999999999999999866443
Q ss_pred cc--cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 442 AN--VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 442 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ........... .+...
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~---~~~~~~~~~~~----~~~~~ 242 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS---VAYQHVREDPI----PPSAR 242 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHCCCC----CHHHH
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHhcCCCC----Ccccc
Confidence 22 12233568999999999999999999999999999999999999997654322 22222221110 00000
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHHhhhcc
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVV-QQLEEIRP 562 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~-~~L~~~~~ 562 (580)
.... ..++.+++.+||+.||++||+..+++ ..+.++..
T Consensus 243 --~~~~---~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 243 --HEGL---SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp --STTC---CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred --cCCC---CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 1111 23566888899999999999766655 45555543
No 118
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.5e-42 Score=338.98 Aligned_cols=253 Identities=27% Similarity=0.462 Sum_probs=199.2
Q ss_pred HHhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
.|.+.+.||+|+||.||+|.+. |+.||||.++... ..+.+.+|++++++++||||+++++++....+..++||||++
T Consensus 22 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 22 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 3667899999999999999886 8899999987542 456789999999999999999999998775667899999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+++|.+++.... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---- 172 (278)
T 1byg_A 99 KGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---- 172 (278)
T ss_dssp TEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCCcEEEeecccccccccccc----
Confidence 999999997642 12378899999999999999999994 999999999999999999999999999875543221
Q ss_pred eecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 448 ATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 448 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
...++..|+|||.+.+..++.++||||||+++|+|++ |+.||...+..+....+. .. .. ... ....
T Consensus 173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~---~~-~~-----~~~---~~~~- 239 (278)
T 1byg_A 173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE---KG-YK-----MDA---PDGC- 239 (278)
T ss_dssp ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT---TT-CC-----CCC---CTTC-
T ss_pred CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh---cC-CC-----CCC---cccC-
Confidence 2357889999999998999999999999999999998 999998765443332221 11 10 000 1111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
...+.+++.+||+.||++|||+.|+++.|++++...
T Consensus 240 --~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 240 --PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp --CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 235667888999999999999999999999987654
No 119
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=349.70 Aligned_cols=271 Identities=14% Similarity=0.143 Sum_probs=207.6
Q ss_pred HhhhccccccCceEEEEEEeCC---------CCEEEEEEccccccccHHHHHHHHHHHhcCCCCccee------------
Q 008031 289 CATAEIMGKSTYGTVYKATLED---------GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLA------------ 347 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------------ 347 (580)
|.+.+.||+|+||.||+|.+.. ++.||+|.+... ..+.+|++++++++||||++
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 5667999999999999999863 789999998643 46789999999999999988
Q ss_pred ---eeeEEECCCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC
Q 008031 348 ---LRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS 424 (580)
Q Consensus 348 ---~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~ 424 (580)
+++++...+...++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+||+++.+
T Consensus 119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN-EYVHGNVTAENIFVDPE 195 (352)
T ss_dssp CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCGGGEEEETT
T ss_pred ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEEcCC
Confidence 6777776567899999999 999999998642 24699999999999999999999995 99999999999999998
Q ss_pred C--CeEEeeccccccccccccc------ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCC
Q 008031 425 T--NAKISDFGLSRLMTAAANV------NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE 496 (580)
Q Consensus 425 ~--~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~ 496 (580)
+ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 275 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT 275 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence 8 8999999999876543221 1123468999999999999999999999999999999999999998654221
Q ss_pred -hhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccCCCCC
Q 008031 497 -LPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAATSSGD 573 (580)
Q Consensus 497 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~~~~~ 573 (580)
............. ....+.... .... ..++.+++.+||+.||++|||+.++++.|+++..+.........+
T Consensus 276 ~~~~~~~~~~~~~~-~~~~~~~~~--~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~d 347 (352)
T 2jii_A 276 EDIMKQKQKFVDKP-GPFVGPCGH--WIRP---SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIG 347 (352)
T ss_dssp HHHHHHHHHHHHSC-CCEECTTSC--EECC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCC
T ss_pred HHHHHHHHhccCCh-hhhhhhccc--cCCC---cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCcccc
Confidence 1111111111111 111110000 0011 135678888999999999999999999999998766555444443
No 120
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1e-41 Score=341.98 Aligned_cols=248 Identities=21% Similarity=0.357 Sum_probs=180.4
Q ss_pred hccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCC-CCcceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
.+.||+|+||.||+|.+. +++.||||++... ....+.+|+.+++.+. ||||+++++++.+ +...++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHD-QLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-CCEEEEEEEccCCC
Confidence 478999999999999986 7899999998643 3467789999999996 9999999999986 66899999999999
Q ss_pred ChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC---CeEEeecccccccccccccce
Q 008031 370 SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST---NAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 370 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
+|.+++... ..+++..+..++.||+.||+|||+ .||+||||||+||+++.++ .+||+|||+++....... ..
T Consensus 92 ~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~ 166 (325)
T 3kn6_A 92 ELFERIKKK---KHFSETEASYIMRKLVSAVSHMHD-VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PL 166 (325)
T ss_dssp BHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-cc
Confidence 999999874 468999999999999999999999 4999999999999998655 799999999986543322 22
Q ss_pred eeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCC----ChhHHHHHHhhhhccccccchhhhccC
Q 008031 447 IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGA----ELPQWVASIVKEEWTNEVFDLELMRDA 522 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (580)
....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+.. ........+..+... .....+.
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~-- 241 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS---FEGEAWK-- 241 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC---CCSHHHH--
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC---CCccccc--
Confidence 3456899999999999999999999999999999999999999865432 222223332222111 0111111
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 523 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
....++.+++.+||+.||++|||+.|++++-
T Consensus 242 ----~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~ 272 (325)
T 3kn6_A 242 ----NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNE 272 (325)
T ss_dssp ----TSCHHHHHHHHHHHCCCTTTCCCTTTSTTCG
T ss_pred ----CCCHHHHHHHHHHCCCChhHCCCHHHHhcCh
Confidence 1123677889999999999999999998764
No 121
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.3e-42 Score=346.41 Aligned_cols=248 Identities=23% Similarity=0.354 Sum_probs=186.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++... ..+.+.+|++++++++||||+++++++.. .+..++||||++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~ 131 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET-PTEISLVLELVT 131 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCC
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec-CCeEEEEEEeCC
Confidence 566789999999999999987 68899999987543 34568899999999999999999999987 568999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC---CCCeEEeeccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD---STNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++. ++.+||+|||+++.......
T Consensus 132 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 206 (349)
T 2w4o_A 132 GGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL- 206 (349)
T ss_dssp SCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc-
Confidence 99999999764 3589999999999999999999995 9999999999999975 88999999999986543321
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+...... ..... .+
T Consensus 207 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~i~~~~~~---~~~~~---~~- 276 (349)
T 2w4o_A 207 -MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMFRRILNCEYY---FISPW---WD- 276 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHHHHHHTTCCC---CCTTT---TT-
T ss_pred -cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHHHHHHhCCCc---cCCch---hh-
Confidence 223568999999999999999999999999999999999999997654322 122222221111 00000 01
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
....++.+++.+||+.||++|||+.|++++
T Consensus 277 --~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 277 --EVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp --TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --hCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 112356788899999999999999999986
No 122
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9e-42 Score=338.46 Aligned_cols=260 Identities=25% Similarity=0.394 Sum_probs=204.7
Q ss_pred HHHhhhccccccCceEEEEEEeC-CC---CEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DG---SQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~l 361 (580)
..|...+.||+|+||.||+|.+. ++ ..||+|.+..... ...+.+.+|+.++++++||||+++++++...+...++
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 33455689999999999999864 22 3799999875433 2346789999999999999999999999875555699
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+.+|+|.+++... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||+++.....
T Consensus 101 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp EECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999999999764 34689999999999999999999995 9999999999999999999999999999865433
Q ss_pred cc---cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCC-CCCCCCCCChhHHHHHHhhhhccccccchh
Q 008031 442 AN---VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKS-PGEPLNGAELPQWVASIVKEEWTNEVFDLE 517 (580)
Q Consensus 442 ~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (580)
.. .......++..|+|||.+.+..++.++||||+|+++|+|++|.. ||...+..+....+.. ....
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~---~~~~------- 247 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ---GRRL------- 247 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT---TCCC-------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc---CCCC-------
Confidence 21 12223467889999999999999999999999999999999555 4554443333332221 1100
Q ss_pred hhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 518 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
...... ...+.+++.+||+.||.+|||+.++++.|+++...-
T Consensus 248 --~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 248 --PQPEYC---PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp --CCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCccc---hHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 001111 135678888999999999999999999999986553
No 123
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.9e-42 Score=358.01 Aligned_cols=246 Identities=24% Similarity=0.394 Sum_probs=202.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++..... .....+.+|+.+++.++||||+++++++.. .+..++|||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-~~~~~lv~E 96 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-PSDIFMVME 96 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEe
Confidence 556799999999999999986 799999999865422 234578999999999999999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~- 171 (476)
T 2y94_A 97 YVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF- 171 (476)
T ss_dssp CCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC-
T ss_pred CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEecCCCeEEEeccchhhcccccc-
Confidence 99999999999764 3689999999999999999999995 999999999999999999999999999987654322
Q ss_pred ceeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 445 NVIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...+..+. ...+..+... ...
T Consensus 172 -~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~----------~p~ 237 (476)
T 2y94_A 172 -LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL---FKKICDGIFY----------TPQ 237 (476)
T ss_dssp -BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH---HHHHHTTCCC----------CCT
T ss_pred -ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH---HHHHhcCCcC----------CCc
Confidence 234569999999999988766 6799999999999999999999986543322 2222222110 011
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
... .++.+++.+||+.||++|||+.|+++|-
T Consensus 238 ~~s---~~~~~Li~~~L~~dP~~Rpt~~eil~hp 268 (476)
T 2y94_A 238 YLN---PSVISLLKHMLQVDPMKRATIKDIREHE 268 (476)
T ss_dssp TCC---HHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred cCC---HHHHHHHHHHcCCCchhCcCHHHHHhCH
Confidence 111 2566888899999999999999999863
No 124
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.6e-41 Score=360.26 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=205.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|...+.||+|+||.||+|.+. +|+.||+|++.... ......+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lVmE 264 (576)
T 2acx_A 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVLT 264 (576)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-CCEEEEEEE
Confidence 455789999999999999986 79999999986532 2345668899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++...+ ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 265 y~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-- 340 (576)
T 2acx_A 265 LMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340 (576)
T ss_dssp CCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred cCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeCCCCeEEEecccceecccCc--
Confidence 999999999998653 33589999999999999999999995 99999999999999999999999999998765432
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...........+...+...... . ...
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~------~---p~~ 411 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE------Y---SER 411 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC------C---CTT
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc------C---Ccc
Confidence 2334579999999999999999999999999999999999999998765443333333322221110 0 011
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARP-----EVLQVVQQ 556 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rp-----s~~ev~~~ 556 (580)
...++.+++.+||+.||++|| ++.|+++|
T Consensus 412 ---~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 412 ---FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 123567888899999999999 78888876
No 125
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.4e-41 Score=337.31 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=194.3
Q ss_pred hccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
.+.||+|+||.||+|.+. +++.||||++..........+.+|++++.++ +||||+++++++.. .+..++||||+++|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~ 96 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-EDRFYLVFEKMRGG 96 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCTTC
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEEEcCCCC
Confidence 378999999999999975 7999999999766555567899999999985 79999999999987 66899999999999
Q ss_pred ChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC---eEEeecccccccccccc---
Q 008031 370 SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN---AKISDFGLSRLMTAAAN--- 443 (580)
Q Consensus 370 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~---~kl~Dfg~~~~~~~~~~--- 443 (580)
+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++. +||+|||++........
T Consensus 97 ~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (316)
T 2ac3_A 97 SILSHIHKR---RHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172 (316)
T ss_dssp BHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----------
T ss_pred cHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccc
Confidence 999999875 3689999999999999999999995 9999999999999997766 99999999876542211
Q ss_pred ---cceeeecCccccCCcccccc-----CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCCh------------hHHHHH
Q 008031 444 ---VNVIATAGALGYRAPELSKL-----KKANTKTDVYSLGVTILELLTGKSPGEPLNGAEL------------PQWVAS 503 (580)
Q Consensus 444 ---~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~------------~~~~~~ 503 (580)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ......
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (316)
T 2ac3_A 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252 (316)
T ss_dssp ---------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHH
T ss_pred ccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHH
Confidence 12223458999999999875 5688999999999999999999999987543321 111111
Q ss_pred HhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 504 IVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
+..... ....... .. ....+.+++.+||+.||++|||+.|++++-
T Consensus 253 i~~~~~---~~~~~~~---~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 253 IQEGKY---EFPDKDW---AH---ISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp HHHCCC---CCCHHHH---TT---SCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred HhccCc---ccCchhc---cc---CCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 111110 0000000 01 123567889999999999999999999863
No 126
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-41 Score=349.69 Aligned_cols=269 Identities=22% Similarity=0.319 Sum_probs=193.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc--cccHHHHHHHHHHHhcCC-CCcceeeeeEEECCC-CcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI--TKGQREFESEVSLLGKIR-HPNLLALRAYYLGPK-GEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++.... ......+.+|+.+++++. ||||+++++++...+ ...++||
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~ 90 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVF 90 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEE
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEe
Confidence 567889999999999999976 79999999986432 223456789999999997 999999999998533 3689999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc--
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA-- 441 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~-- 441 (580)
||++ ++|.++++.. .+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+++.....
T Consensus 91 e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 91 DYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHS-GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp ECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred cccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 9997 6899998763 58999999999999999999999 49999999999999999999999999999765321
Q ss_pred ------------------cccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHH
Q 008031 442 ------------------ANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVA 502 (580)
Q Consensus 442 ------------------~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~ 502 (580)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~ 244 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 1112234579999999998876 678999999999999999999999998765433332222
Q ss_pred HHhhhhcccc---ccch---h----h-------hccCCCcH--------------HHHHHHHHHHhhccCCCCCCCCCHH
Q 008031 503 SIVKEEWTNE---VFDL---E----L-------MRDAPTIG--------------DELLNTLKLALHCVDPSPSARPEVL 551 (580)
Q Consensus 503 ~~~~~~~~~~---~~~~---~----~-------~~~~~~~~--------------~~~~~l~~li~~cl~~~P~~Rps~~ 551 (580)
.......... ...+ . + ........ ....++.+++.+||+.||++|||+.
T Consensus 245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~ 324 (388)
T 3oz6_A 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN 324 (388)
T ss_dssp HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence 1111000000 0000 0 0 00000000 1123577899999999999999999
Q ss_pred HHHHH--Hhhhccc
Q 008031 552 QVVQQ--LEEIRPE 563 (580)
Q Consensus 552 ev~~~--L~~~~~~ 563 (580)
|+++| +..+...
T Consensus 325 e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 325 DALKHPFVSIFHNP 338 (388)
T ss_dssp HHTTSTTTTTTCCG
T ss_pred HHhCCHHHHHhcCC
Confidence 99998 5555443
No 127
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.8e-42 Score=344.43 Aligned_cols=261 Identities=20% Similarity=0.334 Sum_probs=207.4
Q ss_pred HHhhhccccccCceEEEEEEeC------CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE------DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
.|.+.+.||+|+||.||+|.+. +++.||+|.+..... .....+.+|+.++++++||||+++++++.. .+..+
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 104 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQPTL 104 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS-SSSCE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc-CCccE
Confidence 4667899999999999999864 367899999975433 234568899999999999999999999976 56889
Q ss_pred EEEeeCCCCChhhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecc
Q 008031 361 LVFDYMPHGSLATFLHARG-------PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFG 433 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg 433 (580)
+||||+++|+|.+++.... ....+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccceEEEcCCCeEEECcCc
Confidence 9999999999999997532 124578999999999999999999995 99999999999999999999999999
Q ss_pred ccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccc
Q 008031 434 LSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTN 511 (580)
Q Consensus 434 ~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (580)
++......... ......+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||...+..+.. ..+......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~~~~~~~~~- 259 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVMEGGLL- 259 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH---HHHHTTCCC-
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHH---HHHHcCCcC-
Confidence 99865443221 1122346788999999998999999999999999999999 89999765433222 222221111
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
...... ...+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 260 --------~~~~~~---~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~ 302 (322)
T 1p4o_A 260 --------DKPDNC---PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302 (322)
T ss_dssp --------CCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred --------CCCCCC---CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCC
Confidence 011111 2356678889999999999999999999999865443
No 128
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-41 Score=345.55 Aligned_cols=256 Identities=22% Similarity=0.289 Sum_probs=197.5
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEccccc-----cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI-----TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
-.|.+.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+ .+..+
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~ 104 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED-EQYIC 104 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-CCeEE
Confidence 45778899999999999999985 78899999986432 2345678999999999999999999999987 66899
Q ss_pred EEEeeCCCCChhhhhhhcC-------------------------------------CCCCCCHHHHHHHHHHHHHHHHHh
Q 008031 361 LVFDYMPHGSLATFLHARG-------------------------------------PETPIDWPTRMKIIKGMTRGLLHL 403 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~-------------------------------------~~~~~~~~~~~~i~~~i~~~l~~L 403 (580)
+||||+++|+|.+++.... ....+++..+..++.||+.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985210 011235677889999999999999
Q ss_pred hcCCCcccCCCCCCCeeeCCCC--CeEEeecccccccccccc---cceeeecCccccCCcccccc--CCCCCcccchhHH
Q 008031 404 HSNENIIHGNLTSSNVLLDDST--NAKISDFGLSRLMTAAAN---VNVIATAGALGYRAPELSKL--KKANTKTDVYSLG 476 (580)
Q Consensus 404 H~~~~i~H~Dlk~~Nil~~~~~--~~kl~Dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G 476 (580)
|+. +|+||||||+||+++.++ .+||+|||++........ .......||+.|+|||++.+ ..++.++||||||
T Consensus 185 H~~-~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG 263 (345)
T 3hko_A 185 HNQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263 (345)
T ss_dssp HHT-TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred HHC-CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence 995 999999999999998766 899999999986643222 22334579999999999865 6788999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 477 VTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 477 ~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
|++|||++|+.||......+. ...+....... .. +........+.+++.+||+.||.+|||+.|++++
T Consensus 264 ~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~---~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 264 VLLHLLLMGAVPFPGVNDADT---ISQVLNKKLCF---EN------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHHSSCSSCCSSHHHH---HHHHHHCCCCT---TS------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHHCCCCCCCCChHHH---HHHHHhccccc---CC------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 999999999999976553322 22222221110 00 0000112356788899999999999999999986
No 129
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8e-42 Score=344.97 Aligned_cols=257 Identities=24% Similarity=0.349 Sum_probs=188.7
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCC-CCcceeeeeEEE-------CCCCc
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYL-------GPKGE 358 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~-------~~~~~ 358 (580)
.|.+.+.||+|+||.||+|.+. +++.||||++........+.+.+|+.+++++. ||||+++++++. .....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 4667899999999999999975 78999999986655555677899999999995 999999999995 22345
Q ss_pred EEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 359 KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN--IIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 359 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~--i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
.++||||+. |+|.+++........+++..+..++.||+.||+|||+. | |+||||||+||+++.++.+||+|||++.
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 789999995 79999987644345799999999999999999999994 8 9999999999999999999999999998
Q ss_pred ccccccccc-----------eeeecCccccCCcccc---ccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHH
Q 008031 437 LMTAAANVN-----------VIATAGALGYRAPELS---KLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVA 502 (580)
Q Consensus 437 ~~~~~~~~~-----------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~ 502 (580)
......... .....||+.|+|||++ .+..++.++|||||||++|+|++|+.||..........
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--- 263 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN--- 263 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc---
Confidence 765432211 1134588999999998 56778899999999999999999999997644322111
Q ss_pred HHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 503 SIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
..... . ..... ...+.+++.+||+.||++|||+.|++++|+++....
T Consensus 264 ----~~~~~-----~---~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 264 ----GKYSI-----P---PHDTQ---YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp ------CCC-----C---TTCCS---SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ----CcccC-----C---ccccc---chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 10000 0 00111 123567888999999999999999999999987544
No 130
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=339.75 Aligned_cols=264 Identities=24% Similarity=0.308 Sum_probs=200.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-----ccHHHHHHHHHHHhcCC---CCcceeeeeEEECCCC--
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-----KGQREFESEVSLLGKIR---HPNLLALRAYYLGPKG-- 357 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~-- 357 (580)
|.+.+.||+|+||.||+|.+. +|+.||||+++.... .....+.+|+.++++++ ||||+++++++.....
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~ 90 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 90 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence 667899999999999999975 799999999864321 12346778888877774 9999999999976433
Q ss_pred --cEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccc
Q 008031 358 --EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLS 435 (580)
Q Consensus 358 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~ 435 (580)
..++||||+. ++|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 91 EIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred ceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 4789999996 59999998754 23489999999999999999999994 9999999999999999999999999999
Q ss_pred cccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccc--
Q 008031 436 RLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV-- 513 (580)
Q Consensus 436 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 513 (580)
+....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+...........+
T Consensus 168 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 168 RIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp TTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCS
T ss_pred cccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 86643322 22356899999999999999999999999999999999999999876544433333322211100000
Q ss_pred --cch--hhhccCCCc-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 514 --FDL--ELMRDAPTI-----GDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 514 --~~~--~~~~~~~~~-----~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
..+ ......+.. +.....+.+++.+||+.||++|||+.|+++|-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~ 298 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCc
Confidence 000 000000000 01124567889999999999999999999863
No 131
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.9e-42 Score=359.70 Aligned_cols=248 Identities=23% Similarity=0.309 Sum_probs=193.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|... +|+.||||+++... ......+.+|+.+++.++||||+++++++.. .+..++|||
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~~~~lv~e 228 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVME 228 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-TTEEEEEEC
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-CCEEEEEEe
Confidence 567899999999999999976 79999999987542 2233567889999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++... ..+++..+..++.||+.||+|||+..||+||||||+|||++.++.+||+|||+++...... .
T Consensus 229 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 304 (446)
T 4ejn_A 229 YANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-A 304 (446)
T ss_dssp CCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred eCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC-c
Confidence 99999999999764 3689999999999999999999972399999999999999999999999999997643322 2
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.. ..+...... . ...
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~---~~i~~~~~~-------~---p~~ 371 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELILMEEIR-------F---PRT 371 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHCCCC-------C---CTT
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH---HHHHhCCCC-------C---Ccc
Confidence 233467999999999999999999999999999999999999999765433222 222221110 0 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARP-----EVLQVVQQL 557 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rp-----s~~ev~~~L 557 (580)
. ..++.+++.+||+.||.+|| |+.|+++|-
T Consensus 372 ~---~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 372 L---GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp S---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred C---CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 1 13566888899999999999 999999753
No 132
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.8e-42 Score=334.15 Aligned_cols=245 Identities=24% Similarity=0.367 Sum_probs=178.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. +|+.||+|++.... ......+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 93 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMVIE 93 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSCEEEEEE
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-CCeEEEEeh
Confidence 556789999999999999875 78999999986543 2335678999999999999999999999986 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+ +++|.+++... ..+++..+..++.|++.||+|||+. |++||||||+||++++++.+||+|||++........
T Consensus 94 ~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 167 (275)
T 2eue_A 94 YA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF- 167 (275)
T ss_dssp CC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred hc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCChHhEEECCCCCEEEeecccceeccCccc-
Confidence 99 77888888764 3589999999999999999999994 999999999999999999999999999976644322
Q ss_pred ceeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 445 NVIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.....||+.|+|||.+.+..+ +.++||||+|+++|+|++|+.||....... ....+...... ...
T Consensus 168 -~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~----------~~~ 233 (275)
T 2eue_A 168 -LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LFKNISNGVYT----------LPK 233 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHTCCC----------CCT
T ss_pred -ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCC----------CCc
Confidence 223468999999999887765 689999999999999999999997654322 22222221110 011
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.. ...+.+++.+||+.||++|||+.|++++-
T Consensus 234 ~~---~~~~~~li~~~l~~dP~~Rps~~e~l~h~ 264 (275)
T 2eue_A 234 FL---SPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp TS---CHHHHHHHHHHSCSSGGGSCCHHHHTTCH
T ss_pred cC---CHHHHHHHHHHhhcCHhHCCCHHHHhhCC
Confidence 11 23566888899999999999999998763
No 133
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2e-41 Score=349.29 Aligned_cols=249 Identities=21% Similarity=0.300 Sum_probs=190.2
Q ss_pred ccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhc-CCCCcceeeeeEEEC---CCCcEEEEEeeCC
Q 008031 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGK-IRHPNLLALRAYYLG---PKGEKLLVFDYMP 367 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~---~~~~~~lv~e~~~ 367 (580)
+.||+|+||.||+|.+. +|+.||||+++. ...+.+|+.++.+ .+||||+++++++.. .....++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999986 789999999853 2456788888744 589999999998864 2446899999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC---CCCeEEeeccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD---STNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+|+|.+++...+ ...+++..+..++.||+.||+|||+. ||+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-- 218 (400)
T 1nxk_A 143 GGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-- 218 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccEEEEecccccccCCCC--
Confidence 999999998653 34589999999999999999999995 9999999999999997 7889999999998654322
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHH-HHhhhhccccccchhhhccCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVA-SIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 523 (580)
......||+.|+|||++.+..++.++|||||||++|||++|+.||............. .+..+... .... ...
T Consensus 219 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~---~~~~---~~~ 292 (400)
T 1nxk_A 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE---FPNP---EWS 292 (400)
T ss_dssp --------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC---CCTT---TTT
T ss_pred ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc---CCCc---ccc
Confidence 2234568999999999999999999999999999999999999998765443221111 11111110 0000 011
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~ 559 (580)
. ...++.+++.+||+.||++|||+.|+++|-.-
T Consensus 293 ~---~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~ 325 (400)
T 1nxk_A 293 E---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325 (400)
T ss_dssp T---SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred c---CCHHHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence 1 12356788999999999999999999998543
No 134
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.9e-41 Score=330.75 Aligned_cols=261 Identities=24% Similarity=0.302 Sum_probs=205.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|.+.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.. .+..++||||
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~ 86 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVFDL 86 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-CCEEEEEEec
Confidence 556789999999999999986 689999999865432 234568899999999999999999999986 6688999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC---eEEeeccccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN---AKISDFGLSRLMTAAA 442 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~---~kl~Dfg~~~~~~~~~ 442 (580)
+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||++.......
T Consensus 87 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 87 VTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp CCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9999999988765 3589999999999999999999994 9999999999999986555 9999999997665433
Q ss_pred ccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccC
Q 008031 443 NVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDA 522 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (580)
. .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||...+..+... .+....... ... ..
T Consensus 163 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~---~~~---~~ 231 (284)
T 3kk8_A 163 A--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA---QIKAGAYDY---PSP---EW 231 (284)
T ss_dssp B--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCCC---CTT---TT
T ss_pred c--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH---HHHhccccC---Cch---hh
Confidence 2 233568999999999999999999999999999999999999997654332222 222211110 000 01
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccccccc
Q 008031 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAA 568 (580)
Q Consensus 523 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~ 568 (580)
... ..++.+++.+||+.||++|||+.|++++-.--........
T Consensus 232 ~~~---~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~ 274 (284)
T 3kk8_A 232 DTV---TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASA 274 (284)
T ss_dssp TTS---CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGGGS
T ss_pred ccc---CHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHHhH
Confidence 111 2356688889999999999999999997554443333333
No 135
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.1e-41 Score=338.30 Aligned_cols=261 Identities=23% Similarity=0.371 Sum_probs=197.8
Q ss_pred HHhhhccccccCceEEEEEEeC----CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC----
Q 008031 288 LCATAEIMGKSTYGTVYKATLE----DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKG---- 357 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 357 (580)
.|.+.+.||+|+||.||+|.+. ++..||+|.++.... ...+.+.+|+.++++++||||+++++++.....
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 114 (313)
T 3brb_A 35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP 114 (313)
T ss_dssp GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence 4567889999999999999864 345899999875432 234568999999999999999999999986332
Q ss_pred cEEEEEeeCCCCChhhhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccc
Q 008031 358 EKLLVFDYMPHGSLATFLHAR---GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL 434 (580)
Q Consensus 358 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~ 434 (580)
..++||||+++|+|.+++... .....+++..++.++.||+.||.|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEEeecCc
Confidence 359999999999999998542 2235699999999999999999999994 999999999999999999999999999
Q ss_pred ccccccccc-cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhcccc
Q 008031 435 SRLMTAAAN-VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNE 512 (580)
Q Consensus 435 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (580)
+........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+....+.. .....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~---~~~~~- 269 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH---GHRLK- 269 (313)
T ss_dssp C----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT---TCCCC-
T ss_pred ceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHc---CCCCC-
Confidence 986644322 12223457889999999999999999999999999999999 9999987655443333221 11100
Q ss_pred ccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
... .....+.+++.+||+.||++|||+.+++++|+++...-
T Consensus 270 --------~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 270 --------QPE---DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp --------CBT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --------CCc---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 011 11235778889999999999999999999999987543
No 136
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-41 Score=370.35 Aligned_cols=249 Identities=24% Similarity=0.351 Sum_probs=199.7
Q ss_pred ccccccCceEEEEEEeC---CCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 293 EIMGKSTYGTVYKATLE---DGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
+.||+|+||.||+|.+. +++.||||+++..... ..+++.+|++++++++||||+++++++.. +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEEEccC
Confidence 47999999999999763 4678999999764332 35679999999999999999999999964 46899999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc--c
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV--N 445 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~ 445 (580)
+|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++........ .
T Consensus 453 ~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 453 LGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999999764 3689999999999999999999994 9999999999999999999999999999876543321 2
Q ss_pred eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 446 VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+..+.+.. .... .....
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~---~~~~---------~~p~~ 596 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK---GERM---------GCPAG 596 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT---TCCC---------CCCTT
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc---CCCC---------CCCCC
Confidence 223356788999999999999999999999999999998 9999987665443333322 1110 00111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcc
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRP 562 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~ 562 (580)
. ..++.++|.+||+.||++|||+.++++.|+++..
T Consensus 597 ~---~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 597 C---PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp C---CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 2 2356788889999999999999999999998753
No 137
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.5e-42 Score=345.75 Aligned_cols=260 Identities=23% Similarity=0.353 Sum_probs=204.7
Q ss_pred hhhccccccCceEEEEEEeC-----CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECC-CCcEEEE
Q 008031 290 ATAEIMGKSTYGTVYKATLE-----DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGP-KGEKLLV 362 (580)
Q Consensus 290 ~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~~lv 362 (580)
...+.||+|+||.||++.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++... ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 66799999999999998653 688999999976533 3346689999999999999999999999864 3468899
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++|+|.+++... .+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.......
T Consensus 114 ~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~-~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHA-QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp ECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHh-CCccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999999864 48999999999999999999999 499999999999999999999999999998765433
Q ss_pred cc--ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCC--------hhH---HHHHHhhhhc
Q 008031 443 NV--NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE--------LPQ---WVASIVKEEW 509 (580)
Q Consensus 443 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~--------~~~---~~~~~~~~~~ 509 (580)
.. ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ... .+........
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 21 2223457888999999998899999999999999999999999986432100 000 0001111000
Q ss_pred cccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
..+.......++.+++.+||+.||++|||+.|+++.|+.+.++-.
T Consensus 269 -----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 269 -----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp -----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 011111122467788889999999999999999999999876544
No 138
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.7e-41 Score=333.17 Aligned_cols=246 Identities=26% Similarity=0.404 Sum_probs=198.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. ++..||+|++.... ......+.+|+.++++++||||+++++++.+ .+..++|||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 89 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLILE 89 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-CCEEEEEEe
Confidence 556789999999999999876 67899999986432 2234678899999999999999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++... ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~-~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~-- 163 (279)
T 3fdn_A 90 YAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS-KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 163 (279)
T ss_dssp CCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT-TTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHhEEEcCCCCEEEEeccccccCCccc--
Confidence 99999999999875 358999999999999999999999 599999999999999999999999999986543322
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
.....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...+..+....+ ...... . ...
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~-------~---~~~ 229 (279)
T 3fdn_A 164 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI---SRVEFT-------F---PDF 229 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHTCCC-------C---CTT
T ss_pred -ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH---HhCCCC-------C---CCc
Confidence 22356899999999999999999999999999999999999999765432222222 111100 0 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
. ...+.+++.+||+.||++|||+.|++++-.
T Consensus 230 ~---~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 230 V---TEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp S---CHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred C---CHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 1 235667888999999999999999999854
No 139
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.5e-42 Score=343.14 Aligned_cols=259 Identities=23% Similarity=0.351 Sum_probs=201.2
Q ss_pred HhhhccccccCceEEEEEEe-----CCCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCC-CcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATL-----EDGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPK-GEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~l 361 (580)
|...+.||+|+||.||+|.+ .+++.||+|+++.... ...+.+.+|++++++++||||+++++++.... ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 56678999999999999984 3688999999875433 34567899999999999999999999998642 46899
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++......
T Consensus 103 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 999999999999996542 458999999999999999999999 49999999999999999999999999999876544
Q ss_pred ccc--ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCC-----------CCChhHHHHHHhhhh
Q 008031 442 ANV--NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLN-----------GAELPQWVASIVKEE 508 (580)
Q Consensus 442 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~-----------~~~~~~~~~~~~~~~ 508 (580)
... ......+|..|+|||.+.+..++.++||||+|+++|+|++|+.|+.... .......+.......
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 321 2223457888999999998999999999999999999999999864211 000000111111110
Q ss_pred ccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhc
Q 008031 509 WTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561 (580)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~ 561 (580)
. ..+........+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 260 ~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 K-----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp C-----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C-----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0 00111112236678889999999999999999999999874
No 140
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.3e-41 Score=356.99 Aligned_cols=260 Identities=22% Similarity=0.255 Sum_probs=194.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc--cccHHHHHHHHHHHhcCCCCcceeeeeEEECCC-----CcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALRAYYLGPK-----GEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~~ 360 (580)
|...+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.... ...+
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 667899999999999999876 78999999997542 223456889999999999999999999997532 3579
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+||||+++ +|.+.+.. .+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 144 lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 144 LVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred EEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 99999975 57666653 388999999999999999999995 999999999999999999999999999986644
Q ss_pred ccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcc---ccc----
Q 008031 441 AANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWT---NEV---- 513 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~---- 513 (580)
.. ......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+..+....+......... ...
T Consensus 217 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~ 294 (464)
T 3ttj_A 217 SF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294 (464)
T ss_dssp CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred Cc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence 32 233457899999999999999999999999999999999999999876533322222211110000 000
Q ss_pred ----------cc---hhhhcc--CCCc----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 514 ----------FD---LELMRD--APTI----GDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 514 ----------~~---~~~~~~--~~~~----~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.. +..... .+.. .....++.+++.+||+.||++|||+.|+++|=
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 00 000000 0000 01145678999999999999999999999874
No 141
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-42 Score=345.80 Aligned_cols=262 Identities=24% Similarity=0.371 Sum_probs=186.9
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhc--CCCCcceeeeeEEECCCC---cEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGK--IRHPNLLALRAYYLGPKG---EKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~---~~~lv~ 363 (580)
|.+.+.||+|+||.||+|.+. |+.||||++... ....+.+|.+++.. ++||||+++++++..... ..++||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 80 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence 456789999999999999876 899999998643 34567788888888 799999999999987432 679999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccCCCCCCCeeeCCCCCeEEeecccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--------SNENIIHGNLTSSNVLLDDSTNAKISDFGLS 435 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~ 435 (580)
||+++|+|.++++.. .+++..+..++.|++.||+||| + .||+||||||+||+++.++.+||+|||++
T Consensus 81 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~-~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 81 DYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGK-PAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB-C-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred eccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccC-CCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999999764 5788889999999999999999 8 59999999999999999999999999999
Q ss_pred ccccccccc---ceeeecCccccCCccccccC------CCCCcccchhHHHHHHHHHcC----------CCCCCCCCCC-
Q 008031 436 RLMTAAANV---NVIATAGALGYRAPELSKLK------KANTKTDVYSLGVTILELLTG----------KSPGEPLNGA- 495 (580)
Q Consensus 436 ~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~el~tg----------~~p~~~~~~~- 495 (580)
......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 766443322 12234699999999998766 344689999999999999999 6666543211
Q ss_pred -ChhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 496 -ELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 496 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
.............. .+..... ....+....+.+++.+||+.||++|||+.++++.|+++.++..
T Consensus 236 ~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKL-----RPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp CCCC-CHHHHTTSCC-----CCCCCGG-GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred ccHHHHHHHHHHhhc-----CCCcccc-ccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 11111111111111 1111000 0112455678899999999999999999999999999987653
No 142
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=340.02 Aligned_cols=263 Identities=24% Similarity=0.359 Sum_probs=203.8
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEEC---CCCcEEEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG---PKGEKLLVF 363 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---~~~~~~lv~ 363 (580)
.|.+.+.||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||||+++++++.. .....++||
T Consensus 30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 109 (317)
T 2buj_A 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109 (317)
T ss_dssp EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence 3667899999999999999984 799999999876545556778999999999999999999999873 234688999
Q ss_pred eeCCCCChhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 364 DYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 364 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
||+++|+|.+++... .....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.......
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 999999999999763 2235689999999999999999999995 99999999999999999999999999987553211
Q ss_pred cc--------ceeeecCccccCCccccccCC---CCCcccchhHHHHHHHHHcCCCCCCCC--CCCChhHHHHHHhhhhc
Q 008031 443 NV--------NVIATAGALGYRAPELSKLKK---ANTKTDVYSLGVTILELLTGKSPGEPL--NGAELPQWVASIVKEEW 509 (580)
Q Consensus 443 ~~--------~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~el~tg~~p~~~~--~~~~~~~~~~~~~~~~~ 509 (580)
.. ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||... ........+. ...
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~ 264 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ----NQL 264 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH----CC-
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh----ccC
Confidence 10 111235789999999987544 688999999999999999999999542 1111111111 000
Q ss_pred cccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccccc
Q 008031 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAAT 566 (580)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~ 566 (580)
..+........+.+++.+||+.||.+|||+.+++++|+.+.+..+.
T Consensus 265 -----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 265 -----------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred -----------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 0011111123577888999999999999999999999998765444
No 143
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.2e-41 Score=340.61 Aligned_cols=262 Identities=25% Similarity=0.358 Sum_probs=208.5
Q ss_pred HHhhhccccccCceEEEEEEe------CCCCEEEEEEccccccc-cHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcE
Q 008031 288 LCATAEIMGKSTYGTVYKATL------EDGSQVAVKRLREKITK-GQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEK 359 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 359 (580)
.|.+.+.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...+...
T Consensus 28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 107 (316)
T 2xir_A 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 107 (316)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCce
Confidence 356788999999999999984 25678999999765432 345789999999999 7999999999998756669
Q ss_pred EEEEeeCCCCChhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC
Q 008031 360 LLVFDYMPHGSLATFLHARGP-------------ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN 426 (580)
Q Consensus 360 ~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~ 426 (580)
++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~~ 186 (316)
T 2xir_A 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNV 186 (316)
T ss_dssp EEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCC
Confidence 999999999999999987532 12378999999999999999999995 9999999999999999999
Q ss_pred eEEeeccccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHH
Q 008031 427 AKISDFGLSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASI 504 (580)
Q Consensus 427 ~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 504 (580)
+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......+. +...
T Consensus 187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~---~~~~ 263 (316)
T 2xir_A 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRR 263 (316)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH---HHHH
T ss_pred EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH---HHHH
Confidence 999999999866443222 2223457889999999999999999999999999999998 9999976553321 1111
Q ss_pred hhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 505 VKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
........ ..... ..++.+++.+||+.||.+|||+.|++++|+.+.+..
T Consensus 264 ~~~~~~~~--------~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 264 LKEGTRMR--------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHTCCCC--------CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hccCccCC--------CCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 11111100 01111 235678888999999999999999999999987543
No 144
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9.4e-42 Score=345.51 Aligned_cols=263 Identities=17% Similarity=0.199 Sum_probs=196.3
Q ss_pred HhhhccccccCceEEEEEEeC----CCCEEEEEEccccccc-----------cHHHHHHHHHHHhcCCCCcceeeeeEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE----DGSQVAVKRLREKITK-----------GQREFESEVSLLGKIRHPNLLALRAYYL 353 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~~~~ 353 (580)
|.+.+.||+|+||.||+|.+. ++..||+|++...... ....+.+|+..++.++||||+++++++.
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~ 118 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence 566799999999999999985 5788999998654321 1234668889999999999999999987
Q ss_pred CC---CCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC--CeE
Q 008031 354 GP---KGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST--NAK 428 (580)
Q Consensus 354 ~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~--~~k 428 (580)
.. ....++||||+ +++|.+++...+ .+++..++.++.||+.||+|||+. ||+||||||+||+++.++ .+|
T Consensus 119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 119 TEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEESSSTTSEE
T ss_pred cccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEEccCCCCcEE
Confidence 62 45789999999 999999998753 689999999999999999999994 999999999999998777 999
Q ss_pred Eeeccccccccccccc------ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCC-hhHHH
Q 008031 429 ISDFGLSRLMTAAANV------NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE-LPQWV 501 (580)
Q Consensus 429 l~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~-~~~~~ 501 (580)
|+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 9999999876433221 1133568999999999999999999999999999999999999996532221 11111
Q ss_pred HHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcc
Q 008031 502 ASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRP 562 (580)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~ 562 (580)
......... .......+ ......++.+++.+||+.||++|||+.++++.|+++..
T Consensus 274 ~~~~~~~~~-----~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTNLLDELP-----QSVLKWAP-SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHTTT-----HHHHHHSC-TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHhhccccc-----HHHHhhcc-ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111111111 11000000 00111256788889999999999999999999998764
No 145
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-41 Score=344.61 Aligned_cols=255 Identities=24% Similarity=0.321 Sum_probs=203.0
Q ss_pred HHhhhccccccCceEEEEEEe----CCCCEEEEEEccccc----cccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCc
Q 008031 288 LCATAEIMGKSTYGTVYKATL----EDGSQVAVKRLREKI----TKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGE 358 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 358 (580)
.|.+.+.||+|+||.||+|.. .+|+.||||+++... ......+.+|+++++++ +||||+++++++.. .+.
T Consensus 55 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~ 133 (355)
T 1vzo_A 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ETK 133 (355)
T ss_dssp GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TTE
T ss_pred ceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-Cce
Confidence 366789999999999999997 378999999987542 12345677899999999 79999999999986 668
Q ss_pred EEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccc
Q 008031 359 KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLM 438 (580)
Q Consensus 359 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~ 438 (580)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999999998753 689999999999999999999994 9999999999999999999999999999876
Q ss_pred ccccccceeeecCccccCCcccccc--CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccch
Q 008031 439 TAAANVNVIATAGALGYRAPELSKL--KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL 516 (580)
Q Consensus 439 ~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.........
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~------ 283 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP------ 283 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC------
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC------
Confidence 5444444445679999999999875 45788999999999999999999999865544333322222111110
Q ss_pred hhhccCCCcHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHHhh
Q 008031 517 ELMRDAPTIGDELLNTLKLALHCVDPSPSARP-----EVLQVVQQLEE 559 (580)
Q Consensus 517 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~ev~~~L~~ 559 (580)
+........+.+++.+||+.||++|| |+.|++++..-
T Consensus 284 ------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 284 ------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred ------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 00111123566788899999999999 99999988643
No 146
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.8e-41 Score=340.69 Aligned_cols=253 Identities=19% Similarity=0.272 Sum_probs=201.8
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEEee
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
.|.+.+.||+|+||.||+|.+. +|+.||+|++..... ...+|++++.++ +||||+++++++.+ .+..++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E~ 97 (342)
T 2qr7_A 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDD-GKYVYVVTEL 97 (342)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEc-CCEEEEEEeC
Confidence 4677899999999999999986 788999999865432 235688888887 79999999999986 6689999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC----CCeEEeecccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS----TNAKISDFGLSRLMTAA 441 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~----~~~kl~Dfg~~~~~~~~ 441 (580)
+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||++.++ +.+||+|||+++.....
T Consensus 98 ~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 98 MKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp CCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred CCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 9999999999764 3689999999999999999999995 99999999999998533 34999999999876443
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||..............+..+.... ....
T Consensus 174 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~---~~~~--- 246 (342)
T 2qr7_A 174 NG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL---SGGY--- 246 (342)
T ss_dssp TC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC---CSTT---
T ss_pred CC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc---Cccc---
Confidence 22 2234568999999999988889999999999999999999999998765544444444443332210 0000
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~ 559 (580)
.+.. ..++.+++.+||+.||++|||+.|+++|-.-
T Consensus 247 ~~~~---s~~~~~li~~~L~~dP~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 247 WNSV---SDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281 (342)
T ss_dssp TTTS---CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred cccC---CHHHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence 1112 2356678889999999999999999987554
No 147
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-41 Score=333.55 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=195.9
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
.|.+.+.||+|+||.||+|... ++..||+|++..... ...+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~ 101 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-YHNMYIVMET 101 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-CCeEEEEEEe
Confidence 4677899999999999999986 789999999875543 345778999999999999999999999986 6689999999
Q ss_pred CCCCChhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee---CCCCCeEEeecccccccccc
Q 008031 366 MPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 366 ~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~---~~~~~~kl~Dfg~~~~~~~~ 441 (580)
+++|+|.+++... .....+++..+..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||++......
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS-QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 9999999998643 123468999999999999999999999 599999999999999 45678999999999866443
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
.. .....||+.|+|||.+. ..++.++||||+|+++|||++|+.||......+...... ..... ....
T Consensus 181 ~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~---~~~~~-------~~~~ 247 (285)
T 3is5_A 181 EH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT---YKEPN-------YAVE 247 (285)
T ss_dssp --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCCCC-------CCC-
T ss_pred cc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc---cCCcc-------cccc
Confidence 22 23456899999999886 568899999999999999999999998654332222111 11100 0000
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.... ..++.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~---~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 CRPL---TPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -CCC---CHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cCcC---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 2356688889999999999999999875
No 148
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9.2e-42 Score=343.09 Aligned_cols=263 Identities=22% Similarity=0.345 Sum_probs=203.6
Q ss_pred HHhhhccccccCceEEEEEEe------CCCCEEEEEEccccc-cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 288 LCATAEIMGKSTYGTVYKATL------EDGSQVAVKRLREKI-TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
.|.+.+.||+|+||.||+|.+ .++..||||.+.... ......+.+|+.++++++||||+++++++.. .+..+
T Consensus 31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 109 (327)
T 2yfx_A 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPRF 109 (327)
T ss_dssp GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCE
T ss_pred heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC-CCCcE
Confidence 356789999999999999984 257789999996443 2345678999999999999999999999986 56789
Q ss_pred EEEeeCCCCChhhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC---CCCeEEeecc
Q 008031 361 LVFDYMPHGSLATFLHARGP----ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD---STNAKISDFG 433 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~---~~~~kl~Dfg 433 (580)
+||||+++|+|.+++..... ...+++..++.++.|++.||.|||+. ||+||||||+||+++. +..+||+|||
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEEEecCCCcceEEECccc
Confidence 99999999999999987532 14589999999999999999999995 9999999999999984 4569999999
Q ss_pred ccccccccccc-ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccc
Q 008031 434 LSRLMTAAANV-NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTN 511 (580)
Q Consensus 434 ~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (580)
++......... ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||......+....+ .......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~---~~~~~~~ 265 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV---TSGGRMD 265 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH---HTTCCCC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH---hcCCCCC
Confidence 98755433221 2223457889999999998899999999999999999998 99999765433222222 1111100
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccc
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATA 567 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~ 567 (580)
..... ...+.+++.+||+.||.+|||+.+++++|+.+.......
T Consensus 266 ---------~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~~ 309 (327)
T 2yfx_A 266 ---------PPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309 (327)
T ss_dssp ---------CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHH
T ss_pred ---------CCCCC---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHHh
Confidence 01111 235668888999999999999999999999987655433
No 149
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.2e-41 Score=335.02 Aligned_cols=266 Identities=23% Similarity=0.367 Sum_probs=197.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|... +|+.||+|+++... ......+.+|+.++++++||||+++++++.. ++..++|||
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 112 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIVLE 112 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCcEEEEEe
Confidence 567899999999999999975 79999999987532 2234568899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 365 YMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 365 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
|+++++|.+++... .....+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++........
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 99999999998752 1234689999999999999999999995 999999999999999999999999999876543322
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+... ........+....... . ...
T Consensus 192 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~------~--~~~ 261 (310)
T 2wqm_A 192 -AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEQCDYPP------L--PSD 261 (310)
T ss_dssp --------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-CHHHHHHHHHTTCSCC------C--CTT
T ss_pred -cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-hHHHHHHHhhcccCCC------C--ccc
Confidence 22234688999999999999999999999999999999999999975432 2222222222211110 0 001
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccC
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAAT 569 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~ 569 (580)
.. ..++.+++.+||+.||++|||+.++++.|+++++....+..
T Consensus 262 ~~---~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~ 304 (310)
T 2wqm_A 262 HY---SEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304 (310)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred cc---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence 11 23567888899999999999999999999999877665543
No 150
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1e-41 Score=347.52 Aligned_cols=259 Identities=22% Similarity=0.251 Sum_probs=200.8
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCC-----CCcceeeeeEEECCCCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIR-----HPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~~~lv 362 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++.. ......+..|+.+++.+. ||||+++++++.. .+..++|
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~-~~~~~lv 114 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY-YDHMCLI 114 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-TTEEEEE
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-CCeeEEE
Confidence 667899999999999999985 7899999998643 233456788999999986 9999999999987 5689999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC-------------------
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD------------------- 423 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~------------------- 423 (580)
|||+ +++|.+++.... ...+++..+..++.||+.||+|||+ .||+||||||+|||++.
T Consensus 115 ~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 115 FEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRK-MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp ECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 9999 999999998753 3358999999999999999999999 59999999999999975
Q ss_pred ------CCCeEEeecccccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCCh
Q 008031 424 ------STNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAEL 497 (580)
Q Consensus 424 ------~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~ 497 (580)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+..+.
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 267 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH 267 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHH
Confidence 7889999999998654322 235689999999999999999999999999999999999999987654443
Q ss_pred hHHHHHHhhhhcc-----------ccccch-hhhccCC---CcHHH---------------HHHHHHHHhhccCCCCCCC
Q 008031 498 PQWVASIVKEEWT-----------NEVFDL-ELMRDAP---TIGDE---------------LLNTLKLALHCVDPSPSAR 547 (580)
Q Consensus 498 ~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~---~~~~~---------------~~~l~~li~~cl~~~P~~R 547 (580)
...+......... ....+. ......+ ..... ...+.+++.+||+.||++|
T Consensus 268 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 347 (360)
T 3llt_A 268 LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLR 347 (360)
T ss_dssp HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhC
Confidence 3333322111000 000000 0000000 00000 1456789999999999999
Q ss_pred CCHHHHHHH
Q 008031 548 PEVLQVVQQ 556 (580)
Q Consensus 548 ps~~ev~~~ 556 (580)
||+.|++++
T Consensus 348 pta~elL~h 356 (360)
T 3llt_A 348 PSPAELLKH 356 (360)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhcC
Confidence 999999865
No 151
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.1e-41 Score=347.06 Aligned_cols=241 Identities=25% Similarity=0.335 Sum_probs=188.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHH-HhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSL-LGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|..+ ++.++||||+++++++.+ .+..|+||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-~~~~~lv~ 118 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVL 118 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-CCEEEEEE
Confidence 567899999999999999986 688999999975432 223456677776 567899999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 119 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~- 193 (373)
T 2r5t_A 119 DYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN- 193 (373)
T ss_dssp ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEeeCccccccccCC-
Confidence 999999999999874 3688999999999999999999994 99999999999999999999999999997643222
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+ ....+...... . .+
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~~~i~~~~~~-------~---~~ 260 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNILNKPLQ-------L---KP 260 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH---HHHHHHHSCCC-------C---CS
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHhcccC-------C---CC
Confidence 22334579999999999999999999999999999999999999997654332 22233222110 0 11
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVL 551 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ 551 (580)
... ..+.+++.+||+.||.+||++.
T Consensus 261 ~~~---~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 261 NIT---NSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp SSC---HHHHHHHHHHTCSSGGGSTTTT
T ss_pred CCC---HHHHHHHHHHcccCHHhCCCCC
Confidence 122 2566788899999999999985
No 152
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.9e-41 Score=342.84 Aligned_cols=252 Identities=27% Similarity=0.410 Sum_probs=201.5
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
..|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCeEEEE
Confidence 34677889999999999999974 789999999864432 223568899999999999999999999986 6689999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+. |+|.+++... ...+++..+..++.|+++||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 99996 6888888654 24689999999999999999999995 9999999999999999999999999999765432
Q ss_pred ccceeeecCccccCCccccc---cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 443 NVNVIATAGALGYRAPELSK---LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...+.. ..+..+....... .
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~---~~~~~~~~~~~~~------~- 273 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHIAQNESPA------L- 273 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHHHSCCCC------C-
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcCCCC------C-
Confidence 2346899999999874 577899999999999999999999999765432 2222222221110 0
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcc
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRP 562 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~ 562 (580)
..... ...+.+++.+||+.||++|||+.+++++..-...
T Consensus 274 -~~~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 274 -QSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp -CCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred -CCCCC---CHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 01111 2356678889999999999999999988665443
No 153
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.6e-41 Score=328.52 Aligned_cols=258 Identities=24% Similarity=0.392 Sum_probs=203.8
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc------ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT------KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
.|...+.||+|+||.||+|.+. +|+.||+|.++.... ...+.+.+|+.++++++||||+++++++.. .+..+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVV 84 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-CCeEE
Confidence 4677899999999999999987 799999999865432 135679999999999999999999999987 56899
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC----CeEEeeccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST----NAKISDFGLSR 436 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~----~~kl~Dfg~~~ 436 (580)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+ .|++||||||+||+++.++ .+||+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHS-KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh-CCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999999764 368999999999999999999999 4999999999999998776 79999999998
Q ss_pred ccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccch
Q 008031 437 LMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL 516 (580)
Q Consensus 437 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
....... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||......+... .+..... ..+.
T Consensus 161 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~---~~~~ 232 (283)
T 3bhy_A 161 KIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT---NISAVNY---DFDE 232 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHTTCC---CCCH
T ss_pred eccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHH---HhHhccc---CCcc
Confidence 6644322 223468999999999999999999999999999999999999997654322222 2111110 0111
Q ss_pred hhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--Hhhhcccc
Q 008031 517 ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ--LEEIRPEA 564 (580)
Q Consensus 517 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~--L~~~~~~~ 564 (580)
..... . ...+.+++.+||+.||++|||+.|++++ ++.++...
T Consensus 233 ~~~~~---~---~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 233 EYFSN---T---SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp HHHTT---C---CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred hhccc---C---CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 11111 1 1356788899999999999999999985 55554443
No 154
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8.5e-41 Score=338.29 Aligned_cols=263 Identities=24% Similarity=0.355 Sum_probs=205.3
Q ss_pred HHhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhc--CCCCcceeeeeEEECCC---CcEEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGK--IRHPNLLALRAYYLGPK---GEKLLV 362 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~---~~~~lv 362 (580)
.|.+.+.||+|+||.||+|.+. |+.||||++... ....+.+|++++.. ++||||+++++++.... ...++|
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 4677899999999999999985 899999998643 34567788888887 79999999999998744 278999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccCCCCCCCeeeCCCCCeEEeeccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH--------SNENIIHGNLTSSNVLLDDSTNAKISDFGL 434 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~ 434 (580)
|||+++|+|.+++... .+++..++.++.|++.||+||| + .+|+||||||+||+++.++.+||+|||+
T Consensus 119 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~-~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGK-PAIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp ECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB-CEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhccc-CCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 9999999999999764 5899999999999999999999 7 5999999999999999999999999999
Q ss_pred cccccccccc---ceeeecCccccCCccccccC------CCCCcccchhHHHHHHHHHcC----------CCCCCCCCCC
Q 008031 435 SRLMTAAANV---NVIATAGALGYRAPELSKLK------KANTKTDVYSLGVTILELLTG----------KSPGEPLNGA 495 (580)
Q Consensus 435 ~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~el~tg----------~~p~~~~~~~ 495 (580)
+......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 273 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence 9866543322 12334689999999998765 233689999999999999999 7788665332
Q ss_pred C-hhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 496 E-LPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 496 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
+ ....+......... .+...... ...+....+.+++.+||+.||++|||+.+++++|+++.++.
T Consensus 274 ~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 274 DPSVEEMRKVVCEQKL----RPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SCCHHHHHHHHTTSCC----CCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHh----CCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 2 11222222111111 11110000 11245567888999999999999999999999999997654
No 155
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=332.81 Aligned_cols=248 Identities=26% Similarity=0.438 Sum_probs=180.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|... +|+.||+|.+..... ...+.+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 91 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-SNYVYLVLE 91 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-CCeEEEEEe
Confidence 556789999999999999974 799999999864422 234678999999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++++|.+++... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++........
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 167 (278)
T 3cok_A 92 MCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE- 167 (278)
T ss_dssp CCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred cCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC-
Confidence 99999999999864 24689999999999999999999995 999999999999999999999999999986643322
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......+....+ ... +... ...
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~-------~~~~---~~~ 234 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV---VLA-------DYEM---PSF 234 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C---CSS-------CCCC---CTT
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH---hhc-------ccCC---ccc
Confidence 222356899999999999989999999999999999999999999865543322111 100 0000 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
. ..++.+++.+||+.||++|||+.+++++-
T Consensus 235 ~---~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 264 (278)
T 3cok_A 235 L---SIEAKDLIHQLLRRNPADRLSLSSVLDHP 264 (278)
T ss_dssp S---CHHHHHHHHHHSCSSGGGSCCHHHHTTST
T ss_pred c---CHHHHHHHHHHcccCHhhCCCHHHHhcCc
Confidence 1 23566888899999999999999998863
No 156
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=342.37 Aligned_cols=269 Identities=27% Similarity=0.359 Sum_probs=196.3
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHH--HhcCCCCcceeeeeEEEC----CCCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSL--LGKIRHPNLLALRAYYLG----PKGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~----~~~~~~lv 362 (580)
|.+.+.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++||||+++++.+.. .....++|
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 15 LKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred hheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 45678999999999999987 58999999986432 2344444444 455899999999976542 22356899
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---------CcccCCCCCCCeeeCCCCCeEEeecc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE---------NIIHGNLTSSNVLLDDSTNAKISDFG 433 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~---------~i~H~Dlk~~Nil~~~~~~~kl~Dfg 433 (580)
|||+++|+|.+++... ..++..+..++.||+.||+|||+ . ||+||||||+|||++.++.+||+|||
T Consensus 91 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~-~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHT-ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp ECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHC-CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHh-hhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 9999999999999765 35889999999999999999998 6 99999999999999999999999999
Q ss_pred cccccccccc-------cceeeecCccccCCcccccc-------CCCCCcccchhHHHHHHHHHcCCCCCCCCCC-CChh
Q 008031 434 LSRLMTAAAN-------VNVIATAGALGYRAPELSKL-------KKANTKTDVYSLGVTILELLTGKSPGEPLNG-AELP 498 (580)
Q Consensus 434 ~~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~-~~~~ 498 (580)
+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||..... .+..
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9986643221 12223469999999999876 4566789999999999999999777643322 1111
Q ss_pred HHHHHHhhh---------hccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccccc
Q 008031 499 QWVASIVKE---------EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAAT 566 (580)
Q Consensus 499 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~ 566 (580)
......... ........+......+.......++.+++.+||+.||++|||+.|+++.|+++......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 111100000 00001111111122223334556788999999999999999999999999998754443
No 157
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.7e-41 Score=335.07 Aligned_cols=250 Identities=23% Similarity=0.369 Sum_probs=200.2
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
.|.+.+.||+|+||.||+|... +|+.||+|+++.........+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 88 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-TTHYYLVMQLV 88 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-CCEEEEEEEcC
Confidence 4677899999999999999986 799999999976544455678999999999999999999999986 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee---CCCCCeEEeecccccccccccc
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
++++|.+++...+ .+++..+..++.|++.||+|||+. |++||||||+||++ +.++.+||+|||++.......
T Consensus 89 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~- 163 (304)
T 2jam_A 89 SGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI- 163 (304)
T ss_dssp CSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT-
T ss_pred CCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc-
Confidence 9999999997643 589999999999999999999995 99999999999999 778899999999987654321
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......+. ...+...... ...... .
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~---~~~~~~---~ 232 (304)
T 2jam_A 164 --MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL---FEKIKEGYYE---FESPFW---D 232 (304)
T ss_dssp --THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHCCCC---CCTTTT---T
T ss_pred --cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHHcCCCC---CCcccc---c
Confidence 1234589999999999999999999999999999999999999976543222 2222221110 000110 1
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
. ....+.+++.+||+.||++|||+.|++++-
T Consensus 233 ~---~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 233 D---ISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp T---SCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred c---CCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 1 123567888999999999999999999864
No 158
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.2e-41 Score=334.50 Aligned_cols=258 Identities=23% Similarity=0.340 Sum_probs=203.2
Q ss_pred Hhhhc-cccccCceEEEEEEeC---CCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEE
Q 008031 289 CATAE-IMGKSTYGTVYKATLE---DGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 289 ~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv 362 (580)
|.+.+ .||+|+||.||+|.+. +++.||||+++..... ..+.+.+|+++++.++||||+++++++. .+..++|
T Consensus 18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv 95 (291)
T 1xbb_A 18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--AESWMLV 95 (291)
T ss_dssp EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--SSSEEEE
T ss_pred hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--CCCcEEE
Confidence 44555 8999999999999653 4678999998754332 2467899999999999999999999994 4578999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.......
T Consensus 96 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999874 3589999999999999999999995 99999999999999999999999999998765433
Q ss_pred ccc--eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 443 NVN--VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 443 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||......+....+.. .... .
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~---~~~~------~-- 240 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK---GERM------G-- 240 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT---TCCC------C--
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---CCCC------C--
Confidence 221 122346788999999988889999999999999999999 9999987654333222221 1110 0
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccc
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATA 567 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~ 567 (580)
..... ...+.+++.+||+.||++|||+.++++.|+++......+
T Consensus 241 -~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 241 -CPAGC---PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp -CCTTC---CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 01111 235678888999999999999999999999987655443
No 159
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2e-41 Score=356.65 Aligned_cols=191 Identities=21% Similarity=0.367 Sum_probs=151.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECC----CCcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGP----KGEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.++++++||||+++++++... ....|+
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 134 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence 667899999999999999976 789999999865332 2346788999999999999999999998642 246899
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+ +++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 135 VLEIA-DSDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp EECCC-SEEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred EEecc-ccchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 99998 57999998764 4699999999999999999999995 9999999999999999999999999999876432
Q ss_pred cc--------------------------cceeeecCccccCCcccc-ccCCCCCcccchhHHHHHHHHHc
Q 008031 442 AN--------------------------VNVIATAGALGYRAPELS-KLKKANTKTDVYSLGVTILELLT 484 (580)
Q Consensus 442 ~~--------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~el~t 484 (580)
.. .......||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 11 123345789999999975 56779999999999999999999
No 160
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=332.14 Aligned_cols=246 Identities=24% Similarity=0.292 Sum_probs=191.3
Q ss_pred HHHHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEE
Q 008031 286 DLLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 286 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~l 361 (580)
...|...+.||+|+||+||+|.+. +|+.||||++..... .....+..|+..+.++ +||||+++++++.+ .+..++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-GGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-CCEEEE
Confidence 345778899999999999999987 799999999865432 2233455666666555 89999999999986 668999
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+ +++|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 99999 779999987753 4699999999999999999999994 9999999999999999999999999998766443
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
.. .....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ....+.. ....+.....
T Consensus 211 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~------~~~~~~~-----~~~~~~~~~~ 276 (311)
T 3p1a_A 211 GA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE------GWQQLRQ-----GYLPPEFTAG 276 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH------HHHHHTT-----TCCCHHHHTT
T ss_pred CC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHhc-----cCCCcccccC
Confidence 22 223468999999999875 78999999999999999999977654321 1111111 1111111111
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
...++.+++.+||+.||++|||+.|++++
T Consensus 277 ------~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 277 ------LSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ------SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------CCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 12367788999999999999999999875
No 161
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.2e-41 Score=340.28 Aligned_cols=258 Identities=26% Similarity=0.431 Sum_probs=202.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEE--EEEEcccccc-ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQV--AVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~v--avK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|...+.||+|+||.||+|.+. ++..+ |+|.++.... ...+.+.+|+++++++ +||||+++++++.. .+..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~lv~ 105 (327)
T 1fvr_A 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAI 105 (327)
T ss_dssp CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-CCceEEEE
Confidence 556789999999999999976 56644 9998865332 3445789999999999 99999999999986 66899999
Q ss_pred eeCCCCChhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEe
Q 008031 364 DYMPHGSLATFLHARG-------------PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKIS 430 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~ 430 (580)
||+++|+|.+++.... ....+++..++.++.||+.||+|||+ .||+||||||+||+++.++.+||+
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECGGGCEEEC
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh-CCccCCCCccceEEEcCCCeEEEc
Confidence 9999999999997642 23468999999999999999999999 499999999999999999999999
Q ss_pred ecccccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhc
Q 008031 431 DFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEW 509 (580)
Q Consensus 431 Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 509 (580)
|||+++...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+... .+.....
T Consensus 185 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~---~~~~~~~ 259 (327)
T 1fvr_A 185 DFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE---KLPQGYR 259 (327)
T ss_dssp CTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH---HGGGTCC
T ss_pred ccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH---HhhcCCC
Confidence 999987443221 1223356788999999998889999999999999999998 999997655332222 2111100
Q ss_pred cccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 510 TNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
. ...... ..++.+++.+||+.||++|||+.|++++|+++..+..
T Consensus 260 ~---------~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 260 L---------EKPLNC---DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp C---------CCCTTB---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred C---------CCCCCC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 001111 2356788889999999999999999999999876543
No 162
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.5e-41 Score=354.00 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=201.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|...+.||+|+||.||+|++. +|+.||+|++..... .....+.+|++++++++||||+++++++.. ....|+|||
T Consensus 187 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lVmE 265 (543)
T 3c4z_A 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-KTDLCLVMT 265 (543)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-CCEEEEEEE
Confidence 344678999999999999986 799999999965432 334678899999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 365 YMPHGSLATFLHARGP-ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
|++||+|.+++..... ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++.......
T Consensus 266 ~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 266 IMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred eccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 9999999999976432 34699999999999999999999995 999999999999999999999999999987654322
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhH-HHHHHhhhhccccccchhhhccC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQ-WVASIVKEEWTNEVFDLELMRDA 522 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 522 (580)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... ....+...... . .
T Consensus 345 -~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~-------~---p 413 (543)
T 3c4z_A 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT-------Y---P 413 (543)
T ss_dssp -CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC-------C---C
T ss_pred -ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC-------C---C
Confidence 2233579999999999999999999999999999999999999998765432222 22222221110 0 1
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 008031 523 PTIGDELLNTLKLALHCVDPSPSARPEV-----LQVVQQ 556 (580)
Q Consensus 523 ~~~~~~~~~l~~li~~cl~~~P~~Rps~-----~ev~~~ 556 (580)
... ...+.+++.+||+.||++||++ .++++|
T Consensus 414 ~~~---s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 414 DKF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp TTS---CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ccc---CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 111 2356678889999999999975 666654
No 163
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=331.77 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=197.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc----cccHHHHHHHHHHHhcCCCCcceeeeeEEEC-CCCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI----TKGQREFESEVSLLGKIRHPNLLALRAYYLG-PKGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~~lv 362 (580)
|.+.+.||+|+||.||+|.+. +++.||+|+++... ......+.+|++++++++||||+++++++.. .....++|
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence 556799999999999999985 78999999987542 2345678999999999999999999999864 24578999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||++++ |.+++.... ...+++..+..++.||+.||+|||+. |++||||||+||+++.++.+||+|||++.......
T Consensus 87 ~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp EECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred ehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 9999876 777776643 34689999999999999999999995 99999999999999999999999999998664322
Q ss_pred -ccceeeecCccccCCccccccCC--CCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 443 -NVNVIATAGALGYRAPELSKLKK--ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 443 -~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
........|+..|+|||++.+.. ++.++||||+|+++|||++|+.||...+.. .....+...... .
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~i~~~~~~-------~- 232 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY---KLFENIGKGSYA-------I- 232 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHCCCC-------C-
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH---HHHHHHhcCCCC-------C-
Confidence 22233456899999999987644 367999999999999999999999765422 222222211110 0
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~ 559 (580)
.... ...+.+++.+||+.||++|||+.|++++-.-
T Consensus 233 --~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 267 (305)
T 2wtk_C 233 --PGDC---GPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267 (305)
T ss_dssp --CSSS---CHHHHHHHHHHTCSSTTTSCCHHHHHHSHHH
T ss_pred --CCcc---CHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence 1111 2356678889999999999999999987543
No 164
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=339.30 Aligned_cols=251 Identities=20% Similarity=0.314 Sum_probs=193.6
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCC--CcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIRH--PNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|...+++.||||++..... ...+.+.+|+.++.+++| +||+++++++.. ++..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~e 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVME 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-CCEEEEEEe
Confidence 556799999999999999998899999999864432 233678899999999976 999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+ .+++|.+++... ..+++.++..++.||+.||+|||+. ||+||||||+|||++ ++.+||+|||+++........
T Consensus 90 ~-~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 90 C-GNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp C-CSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred C-CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 5 588999999875 3689999999999999999999995 999999999999997 577999999999876543322
Q ss_pred -ceeeecCccccCCcccccc-----------CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc
Q 008031 445 -NVIATAGALGYRAPELSKL-----------KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE 512 (580)
Q Consensus 445 -~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (580)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+..........
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~~~~~~~~~~- 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISKLHAIIDPNHEI- 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHHCTTSCC-
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh--HHHHHHHHhcCCccc-
Confidence 2234579999999999864 6788899999999999999999999975432 222222222211110
Q ss_pred ccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 008031 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559 (580)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~ 559 (580)
..+.. ....+.+++.+||+.||++|||+.|++++-.-
T Consensus 241 --------~~~~~--~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~ 277 (343)
T 3dbq_A 241 --------EFPDI--PEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277 (343)
T ss_dssp --------CCCCC--SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred --------CCccc--CCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence 11111 11256688899999999999999999988643
No 165
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6e-41 Score=337.00 Aligned_cols=248 Identities=22% Similarity=0.340 Sum_probs=196.4
Q ss_pred ccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
+.||+|+||.||+|... +|+.||+|+++.... .....+.+|+.++.++ +||||+++++++.. .+..++||||+++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~-~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-TSEIILILEYAAG 113 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEECCTT
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-CCeEEEEEEecCC
Confidence 78999999999999986 799999999875432 3356789999999999 57999999999986 6689999999999
Q ss_pred CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC---CCCeEEeecccccccccccccc
Q 008031 369 GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD---STNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 369 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
|+|.+++.... ...+++..+..++.|++.||+|||+ .||+||||||+||+++. ++.+||+|||++........
T Consensus 114 ~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~-~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~-- 189 (327)
T 3lm5_A 114 GEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQ-NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-- 189 (327)
T ss_dssp EEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred CcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH-CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc--
Confidence 99999986532 3468999999999999999999999 49999999999999997 78999999999987654322
Q ss_pred eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCc
Q 008031 446 VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTI 525 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (580)
.....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...+..+....+.. .... ..... ...
T Consensus 190 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~---~~~~~---~~~- 259 (327)
T 3lm5_A 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ---VNVD---YSEET---FSS- 259 (327)
T ss_dssp ----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCC---CCTTT---TTT-
T ss_pred cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh---cccc---cCchh---hcc-
Confidence 2335689999999999999999999999999999999999999976543322222211 1100 00000 111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 526 GDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 526 ~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
....+.+++.+||+.||++|||+.|++++-
T Consensus 260 --~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 260 --VSQLATDFIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHTTCG
T ss_pred --cCHHHHHHHHHHcCCChhhCcCHHHHhCCH
Confidence 123566788899999999999999999874
No 166
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=340.84 Aligned_cols=242 Identities=20% Similarity=0.343 Sum_probs=198.3
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--------ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--------KGQREFESEVSLLGKIRHPNLLALRAYYLGPKG 357 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 357 (580)
..|.+.+.||+|+||.||+|.+. +++.||||+++.... .....+.+|+.++++++||||+++++++.. .+
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~~ 102 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-QG 102 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-SS
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-CC
Confidence 35777899999999999999975 788999999875431 123457789999999999999999999986 66
Q ss_pred cEEEEEeeCCCC-ChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 358 EKLLVFDYMPHG-SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 358 ~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
..++||||+.+| +|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 899999999777 999999864 3689999999999999999999994 99999999999999999999999999998
Q ss_pred ccccccccceeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccc
Q 008031 437 LMTAAANVNVIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFD 515 (580)
Q Consensus 437 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (580)
....... .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... .....
T Consensus 179 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~------- 240 (335)
T 3dls_A 179 YLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---------TVEAA------- 240 (335)
T ss_dssp ECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------GTTTC-------
T ss_pred ECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------HHhhc-------
Confidence 7654332 234569999999999988776 7889999999999999999999965221 00000
Q ss_pred hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 516 LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 516 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
. ...... ..++.+++.+||+.||++|||+.|++++-
T Consensus 241 --~-~~~~~~---~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 241 --I-HPPYLV---SKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp --C-CCSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred --c-CCCccc---CHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0 001111 12566888899999999999999999984
No 167
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-41 Score=343.04 Aligned_cols=260 Identities=24% Similarity=0.342 Sum_probs=206.3
Q ss_pred HhhhccccccCceEEEEEEeC-CC-----CEEEEEEcccccc-ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DG-----SQVAVKRLREKIT-KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 360 (580)
|...+.||+|+||.||+|.+. ++ ..||+|.++.... ...+.+.+|+.+++++ +||||+++++++.. .+..+
T Consensus 48 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~ 126 (333)
T 2i1m_A 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-GGPVL 126 (333)
T ss_dssp EEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCE
T ss_pred ceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-CCceE
Confidence 556789999999999999975 23 4799999875533 3346789999999999 89999999999976 66899
Q ss_pred EEEeeCCCCChhhhhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEE
Q 008031 361 LVFDYMPHGSLATFLHARG-----------PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKI 429 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl 429 (580)
+||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGCEEEGGGEEEB
T ss_pred EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCcccceEEECCCCeEEE
Confidence 9999999999999997542 124589999999999999999999995 9999999999999999999999
Q ss_pred eecccccccccccccc-eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhh
Q 008031 430 SDFGLSRLMTAAANVN-VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKE 507 (580)
Q Consensus 430 ~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 507 (580)
+|||++.......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |..||......... ......
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~---~~~~~~ 282 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF---YKLVKD 282 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH---HHHHHH
T ss_pred CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH---HHHHhc
Confidence 9999998664433221 223346788999999998999999999999999999999 99999775543322 222222
Q ss_pred hccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccc
Q 008031 508 EWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~ 564 (580)
..... ..... ...+.+++.+||+.||.+|||+.|++++|+++..+.
T Consensus 283 ~~~~~--------~~~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 283 GYQMA--------QPAFA---PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp TCCCC--------CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCC--------CCCCC---CHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 11100 01111 235678888999999999999999999999876543
No 168
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-41 Score=339.86 Aligned_cols=266 Identities=22% Similarity=0.258 Sum_probs=198.6
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc-----cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK-----GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~l 361 (580)
.|...+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|++++++++||||+++++++.. .+..++
T Consensus 11 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l 89 (346)
T 1ua2_A 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-KSNISL 89 (346)
T ss_dssp --CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-TTCCEE
T ss_pred ccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee-CCceEE
Confidence 4677899999999999999986 6899999998743221 12467899999999999999999999976 668999
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+++ +|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999975 898888764 34588899999999999999999995 9999999999999999999999999999876433
Q ss_pred cccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhh--
Q 008031 442 ANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL-- 518 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 518 (580)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|..||.+.+..+....+...........+-+...
T Consensus 166 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (346)
T 1ua2_A 166 NR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244 (346)
T ss_dssp CC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred cc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence 22 2234568999999999865 4588999999999999999999999977654333222222111110000000000
Q ss_pred ----hccCCC-c-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 008031 519 ----MRDAPT-I-----GDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559 (580)
Q Consensus 519 ----~~~~~~-~-----~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~ 559 (580)
....+. . .....++.+++.+||+.||++|||+.|++++-.-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f 295 (346)
T 1ua2_A 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295 (346)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence 000000 0 0112467789999999999999999999987543
No 169
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.3e-41 Score=353.95 Aligned_cols=251 Identities=26% Similarity=0.342 Sum_probs=202.1
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEccccc--cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
..|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++.. ....++||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 100 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVG 100 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-CCEEEEEE
Confidence 35778899999999999999986 79999999986432 2345678999999999999999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC---CCCCeEEeeccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD---DSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~---~~~~~kl~Dfg~~~~~~~ 440 (580)
||+++|+|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++ .++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999998765 3689999999999999999999995 999999999999995 456799999999986644
Q ss_pred ccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 441 AANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
.. ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+..+... .+....... +...+.
T Consensus 177 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~i~~~~~~~---~~~~~~ 247 (486)
T 3mwu_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK---RVETGKYAF---DLPQWR 247 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCCS---CSGGGG
T ss_pred CC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHhCCCCC---CCcccC
Confidence 32 2334579999999999875 58999999999999999999999997755433322 222222111 111111
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
....++.+++.+||+.||++|||+.|++++-
T Consensus 248 ------~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 248 ------TISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp ------GSCHHHHHHHHHHTCSSTTTSCCHHHHHHCH
T ss_pred ------CCCHHHHHHHHHHcCCChhhCcCHHHHhcCH
Confidence 1123567889999999999999999999974
No 170
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8.2e-41 Score=354.94 Aligned_cols=249 Identities=27% Similarity=0.389 Sum_probs=197.9
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccc--cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI--TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
.|...+.||+|+||.||+|.+. ++..||+|+++... ......+.+|+.+++.++||||+++++++.. ....++|||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 116 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-KRNYYLVME 116 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEe
Confidence 4778899999999999999986 78999999987543 2345678999999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC---CCCeEEeecccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD---STNAKISDFGLSRLMTAA 441 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~---~~~~kl~Dfg~~~~~~~~ 441 (580)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .||+||||||+|||++. ++.+||+|||++......
T Consensus 117 ~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHK-HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 99999999988765 358999999999999999999999 49999999999999975 445999999999876543
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
.. .....||+.|+|||++. ..++.++||||+||++|+|++|+.||.+....+.... +...... .+...+
T Consensus 193 ~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---i~~~~~~---~~~~~~-- 261 (494)
T 3lij_A 193 KK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRK---VEKGKYT---FDSPEW-- 261 (494)
T ss_dssp BC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHTCCC---CCSGGG--
T ss_pred cc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhCCCC---CCchhc--
Confidence 22 23456999999999886 5699999999999999999999999987654333322 2222111 111111
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
... ...+.+++.+||+.||++|||+.|+++|
T Consensus 262 -~~~---s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 262 -KNV---SEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -TTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -ccC---CHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111 2356688889999999999999999986
No 171
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.7e-41 Score=347.25 Aligned_cols=250 Identities=23% Similarity=0.325 Sum_probs=190.1
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--------ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCc
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--------KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGE 358 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 358 (580)
.|.+.+.||+|+||.||+|.+. +++.||||++..... .....+.+|+.++++++||||+++++++.. +.
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~ 213 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--ED 213 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES--SE
T ss_pred cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec--Cc
Confidence 3667889999999999999986 789999999864321 112347899999999999999999999864 46
Q ss_pred EEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC---CCeEEeecccc
Q 008031 359 KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS---TNAKISDFGLS 435 (580)
Q Consensus 359 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~---~~~kl~Dfg~~ 435 (580)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+|||++.+ ..+||+|||++
T Consensus 214 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred eEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCCCcceEEEeecccc
Confidence 89999999999999998764 4689999999999999999999994 99999999999999754 45999999999
Q ss_pred cccccccccceeeecCccccCCccccc---cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCC-hhHHHHHHhhhhccc
Q 008031 436 RLMTAAANVNVIATAGALGYRAPELSK---LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAE-LPQWVASIVKEEWTN 511 (580)
Q Consensus 436 ~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~ 511 (580)
+...... ......||+.|+|||++. ...++.++||||+||++|+|++|+.||....... ....+.. ....
T Consensus 290 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~---~~~~- 363 (419)
T 3i6u_A 290 KILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS---GKYN- 363 (419)
T ss_dssp TSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT---TCCC-
T ss_pred eecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc---CCCC-
Confidence 8765432 223456899999999975 3677889999999999999999999997654332 2222211 1100
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
..+..... ....+.+++.+||+.||++|||+.|+++|=
T Consensus 364 --~~~~~~~~------~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 401 (419)
T 3i6u_A 364 --FIPEVWAE------VSEKALDLVKKLLVVDPKARFTTEEALRHP 401 (419)
T ss_dssp --CCHHHHTT------SCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred --CCchhhcc------cCHHHHHHHHHHccCChhHCcCHHHHhCCc
Confidence 01111111 123567889999999999999999999863
No 172
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.1e-41 Score=333.75 Aligned_cols=262 Identities=23% Similarity=0.331 Sum_probs=197.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|...+.||+|+||.||+|.+. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.. .+..++||||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 83 (311)
T 4agu_A 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVFEY 83 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-CCeEEEEEEe
Confidence 456789999999999999986 6999999998654332 24567899999999999999999999986 6689999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++........ .
T Consensus 84 ~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 158 (311)
T 4agu_A 84 CDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-Y 158 (311)
T ss_dssp CSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-c
Confidence 9999999988754 3589999999999999999999994 999999999999999999999999999987653322 2
Q ss_pred eeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcc--------ccccch
Q 008031 446 VIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWT--------NEVFDL 516 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 516 (580)
.....||..|+|||.+.+ ..++.++||||+|+++|+|++|+.||......+....+......... ......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 223468999999998875 67899999999999999999999999876554433333322111000 000000
Q ss_pred hhhccCC---C----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 517 ELMRDAP---T----IGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 517 ~~~~~~~---~----~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
....... . .+.....+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000 0 00112356788999999999999999999987
No 173
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.3e-40 Score=342.19 Aligned_cols=250 Identities=20% Similarity=0.314 Sum_probs=194.4
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCC--CCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIR--HPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|...+++.||||++..... ...+.+.+|+.++++++ ||||+++++++.. ++..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~E 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVME 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-CCEEEEEEe
Confidence 567899999999999999988899999999864432 23467899999999996 5999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+.+++|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+|||++ ++.+||+|||+++........
T Consensus 137 -~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 137 -CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp -CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred -cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 56889999998753 688999999999999999999994 999999999999996 578999999999876543322
Q ss_pred -ceeeecCccccCCcccccc-----------CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc
Q 008031 445 -NVIATAGALGYRAPELSKL-----------KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE 512 (580)
Q Consensus 445 -~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (580)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+..+.......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~~~~~~~~~~~~~~~- 287 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISKLHAIIDPNHEI- 287 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC--HHHHHHHHHCTTSCC-
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH--HHHHHHHHhCccccC-
Confidence 2234579999999998864 4688899999999999999999999975432 222222222211110
Q ss_pred ccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
..+... ..++.+++.+||+.||++|||+.|++++-.
T Consensus 288 --------~~~~~~--~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 288 --------EFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp --------CCCCCS--CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred --------CCCccc--hHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 111111 235678889999999999999999998754
No 174
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.5e-40 Score=325.80 Aligned_cols=252 Identities=22% Similarity=0.306 Sum_probs=201.7
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
.|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.. .+..++||||
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 86 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLEY 86 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-CCEEEEEEEe
Confidence 4677899999999999999986 789999999865433 335678999999999999999999999986 6688999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc-c
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN-V 444 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 444 (580)
+++++|.+++... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++........ .
T Consensus 87 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 87 CSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp CTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 9999999999753 3689999999999999999999994 999999999999999999999999999986543322 1
Q ss_pred ceeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 445 NVIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
......|+..|+|||.+.+..+ +.++||||+|+++|+|++|+.||......... .......... . +
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~---~--------~ 229 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE--YSDWKEKKTY---L--------N 229 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH--HHHHHTTCTT---S--------T
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH--HHHhhhcccc---c--------C
Confidence 2234568999999999987665 67899999999999999999999876543211 1111111100 0 0
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
........+.+++.+||+.||++|||+.|++++-
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 0011123566889999999999999999998863
No 175
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.2e-41 Score=340.40 Aligned_cols=261 Identities=21% Similarity=0.274 Sum_probs=190.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++..... ....+.+|+.++++++||||+++++++.. .+..++||||
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 114 (329)
T 3gbz_A 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-NHRLHLIFEY 114 (329)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-CCEEEEEEec
Confidence 667899999999999999876 7899999999654332 23467899999999999999999999987 6689999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC-----CCCCeEEeeccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD-----DSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~-----~~~~~kl~Dfg~~~~~~~ 440 (580)
++ |+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++ +++.+||+|||+++....
T Consensus 115 ~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 115 AE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp CS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred CC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 97 5999999875 3589999999999999999999995 999999999999994 455699999999986643
Q ss_pred ccccceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccch---
Q 008031 441 AANVNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL--- 516 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 516 (580)
... ......||..|+|||++.+. .++.++||||+||++|||++|+.||......+....+...........+-..
T Consensus 190 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 190 PIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred ccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 322 22334679999999998764 5899999999999999999999999765543322222221110000000000
Q ss_pred -hhhccC----C-CcHH-----HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 517 -ELMRDA----P-TIGD-----ELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 517 -~~~~~~----~-~~~~-----~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
...... . .... ...++.+++.+||+.||++|||+.|+++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 0 0000 12456789999999999999999999875
No 176
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.1e-41 Score=356.02 Aligned_cols=251 Identities=26% Similarity=0.376 Sum_probs=204.0
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
.|...+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++.. .+..++||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 105 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-KGYFYLVG 105 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEE
Confidence 5778899999999999999986 79999999986432 2345679999999999999999999999987 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee---CCCCCeEEeeccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~---~~~~~~kl~Dfg~~~~~~~ 440 (580)
||+.+|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||++ +.++.+||+|||+++....
T Consensus 106 e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999999999764 3689999999999999999999995 99999999999999 4678899999999986654
Q ss_pred ccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 441 AANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...+..+... .+....... +...+.
T Consensus 182 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~i~~~~~~~---~~~~~~ 252 (484)
T 3nyv_A 182 SKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK---KVEKGKYTF---ELPQWK 252 (484)
T ss_dssp CCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCC---CSGGGG
T ss_pred ccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHcCCCCC---CCcccc
Confidence 332 223569999999999875 69999999999999999999999998765433333 222222110 101111
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
.....+.+++.+||+.||++|||+.|+++|-.
T Consensus 253 ------~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 253 ------KVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp ------GSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred ------cCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 11235678889999999999999999998754
No 177
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.2e-42 Score=351.66 Aligned_cols=241 Identities=17% Similarity=0.239 Sum_probs=185.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccc---ccccHHHHHHHH---HHHhcCCCCcceeee-------eEEEC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREK---ITKGQREFESEV---SLLGKIRHPNLLALR-------AYYLG 354 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~~~~ 354 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+ +.+++++||||++++ +++..
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~ 154 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 154 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence 456789999999999999974 7999999998743 223446788999 555666899999998 66654
Q ss_pred CCC----------------cEEEEEeeCCCCChhhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCC
Q 008031 355 PKG----------------EKLLVFDYMPHGSLATFLHARGP----ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNL 414 (580)
Q Consensus 355 ~~~----------------~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dl 414 (580)
.+. ..++||||+ +|+|.+++...+. ...+++..+..++.||+.||+|||+. ||+||||
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDi 232 (377)
T 3byv_A 155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYL 232 (377)
T ss_dssp TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSCC
T ss_pred cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecCCC
Confidence 321 378999999 6899999986421 11233578889999999999999995 9999999
Q ss_pred CCCCeeeCCCCCeEEeecccccccccccccceeeecCccccCCccccccC-----------CCCCcccchhHHHHHHHHH
Q 008031 415 TSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLK-----------KANTKTDVYSLGVTILELL 483 (580)
Q Consensus 415 k~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~s~G~~l~el~ 483 (580)
||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|||+
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred CHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 99999999999999999999985432 2334567 999999999887 8999999999999999999
Q ss_pred cCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 484 TGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 484 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
+|+.||......+....+.. ..+..+ .++.+++.+||+.||++|||+.|++++
T Consensus 308 tg~~Pf~~~~~~~~~~~~~~-----------------~~~~~~---~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 308 CADLPITKDAALGGSEWIFR-----------------SCKNIP---QPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HSSCCC------CCSGGGGS-----------------SCCCCC---HHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HCCCCCcccccccchhhhhh-----------------hccCCC---HHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99999976554332222110 111222 256678889999999999999999974
No 178
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.1e-40 Score=325.22 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=196.0
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECC---CCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGP---KGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---~~~~~lv 362 (580)
|.+.+.||+|+||.||+|.+. ++..||+|.+..... ...+.+.+|+.++++++||||+++++++... ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 345678999999999999986 788999999865432 2345689999999999999999999998642 3458999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccCCCCCCCeeeC-CCCCeEEeecccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNEN--IIHGNLTSSNVLLD-DSTNAKISDFGLSRLMT 439 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~--i~H~Dlk~~Nil~~-~~~~~kl~Dfg~~~~~~ 439 (580)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. + ++||||||+||+++ .++.+||+|||++....
T Consensus 108 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 9999999999999874 3689999999999999999999994 8 99999999999998 78899999999997544
Q ss_pred cccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 440 AAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 440 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
.. ......||+.|+|||.+. +.++.++||||+|+++|+|++|+.||..... ............ .. ....
T Consensus 184 ~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~-~~----~~~~ 252 (290)
T 1t4h_A 184 AS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGV-KP----ASFD 252 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTC-CC----GGGG
T ss_pred cc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc--HHHHHHHHhccC-Cc----cccC
Confidence 32 223456899999999887 4689999999999999999999999976432 222222221111 11 1111
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
... ..++.+++.+||+.||.+|||+.|++++
T Consensus 253 ~~~------~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 253 KVA------IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GCC------CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCC------CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111 1257788999999999999999999875
No 179
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=338.40 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=195.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccccc-HHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKG-QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|...+.||+|+||.||+|.+. +++.||+|++....... ...+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 82 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFEYL 82 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-SSCEEEEEECC
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-CCEEEEEeccc
Confidence 456789999999999999986 78999999986543221 2245679999999999999999999987 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
+ |+|.+++...+ ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++........ ..
T Consensus 83 ~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~ 157 (324)
T 3mtl_A 83 D-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TY 157 (324)
T ss_dssp S-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred c-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-cc
Confidence 6 59999988753 4589999999999999999999994 999999999999999999999999999976543322 22
Q ss_pred eeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccc---cch------
Q 008031 447 IATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV---FDL------ 516 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------ 516 (580)
....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..+....+...........+ ...
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 33468999999998876 56899999999999999999999999876654444444333221111000 000
Q ss_pred --------hhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 517 --------ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 517 --------~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
......+.. ..++.+++.+||+.||++|||+.|++++=.
T Consensus 238 ~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 284 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRL---DSDGADLLTKLLQFEGRNRISAEDAMKHPF 284 (324)
T ss_dssp CCCCCCCCCHHHHCTTS---CHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred ccccccchhhhhhcCCC---CHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence 000001111 235668899999999999999999998643
No 180
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.6e-41 Score=331.60 Aligned_cols=248 Identities=21% Similarity=0.352 Sum_probs=201.8
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|...+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.. .+..++|||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 95 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVVLE 95 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-CCEEEEEEe
Confidence 456799999999999999987 688999999865432 234568899999999999999999999986 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++++|.+++... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++........
T Consensus 96 ~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 170 (294)
T 2rku_A 96 LCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 170 (294)
T ss_dssp CCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred cCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcCCCCEEEEeccCceecccCcc-
Confidence 99999999998764 3689999999999999999999995 999999999999999999999999999986643322
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......+ ....+...... . ...
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~-------~---~~~ 237 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYS-------I---PKH 237 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHTTCCC-------C---CTT
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhhccCC-------C---ccc
Confidence 2223568999999999998899999999999999999999999997654322 22221111110 0 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
.+ ..+.+++.+||+.||++|||+.|++++-.
T Consensus 238 ~~---~~~~~li~~~l~~~p~~Rps~~~ll~~~~ 268 (294)
T 2rku_A 238 IN---PVAASLIQKMLQTDPTARPTINELLNDEF 268 (294)
T ss_dssp SC---HHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred cC---HHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 11 25667888999999999999999998753
No 181
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1e-40 Score=336.55 Aligned_cols=247 Identities=21% Similarity=0.359 Sum_probs=201.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|...+.||+|+||.||++.+. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+ .+..++|||
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 121 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEEe
Confidence 556799999999999999986 688999999865432 234568899999999999999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++........
T Consensus 122 ~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 196 (335)
T 2owb_A 122 LCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 196 (335)
T ss_dssp CCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred cCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-
Confidence 99999999998764 3689999999999999999999995 999999999999999999999999999986643322
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+...... . ...
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~-------~---~~~ 263 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYS-------I---PKH 263 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHHTCCC-------C---CTT
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHHhcCCCC-------C---Ccc
Confidence 2233568999999999999999999999999999999999999997654322 22222111110 0 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.. ..+.+++.+||+.||++|||+.|++++-
T Consensus 264 ~~---~~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 264 IN---PVAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp SC---HHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 11 2566788899999999999999999864
No 182
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=8.7e-41 Score=336.45 Aligned_cols=258 Identities=17% Similarity=0.238 Sum_probs=196.5
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCC-CCcceeeeeEEECC-CCcEEEEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGP-KGEKLLVF 363 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~-~~~~~lv~ 363 (580)
..|.+.+.||+|+||.||+|.+. +++.||||+++.. ..+.+.+|+.++++++ ||||+++++++... ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 34677899999999999999875 7899999998643 3567899999999996 99999999999863 34689999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC-CeEEeeccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST-NAKISDFGLSRLMTAAA 442 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~-~~kl~Dfg~~~~~~~~~ 442 (580)
||+++++|.+++.. +++..+..++.|++.||+|||+. ||+||||||+||+++.++ .+||+|||+++......
T Consensus 113 e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp ECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999999998853 78899999999999999999994 999999999999999666 89999999998665433
Q ss_pred ccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCC-ChhHHHHHHhhhhcccc-------c
Q 008031 443 NVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGA-ELPQWVASIVKEEWTNE-------V 513 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~-------~ 513 (580)
. .....++..|+|||.+.+ ..++.++||||+||++|+|++|+.||...... +....+........... .
T Consensus 186 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 186 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp C--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred c--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 2 223468899999999876 67899999999999999999999999543221 11111111111000000 0
Q ss_pred cchhh-----------h---ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 514 FDLEL-----------M---RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 514 ~~~~~-----------~---~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.++.. + ...........++.+++.+||+.||++|||+.|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000 0 0000000123467789999999999999999999986
No 183
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.4e-41 Score=328.79 Aligned_cols=245 Identities=23% Similarity=0.388 Sum_probs=200.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.. .+..++|||
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 94 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-RKRIYLMLE 94 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-CCEEEEEEE
Confidence 566789999999999999986 67889999986432 2234678999999999999999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++|+|.+++...+ .+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 95 FAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp CCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred eCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 999999999998753 589999999999999999999994 99999999999999999999999999987554322
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
.....|+..|+|||.+.+..++.++||||+|+++|+|++|+.||......+. ...+..... .. .+.
T Consensus 169 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~-------~~---~~~ 234 (284)
T 2vgo_A 169 -RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET---HRRIVNVDL-------KF---PPF 234 (284)
T ss_dssp -BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTTCC-------CC---CTT
T ss_pred -cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH---HHHHhcccc-------CC---CCc
Confidence 2235689999999999999999999999999999999999999976543222 222211110 00 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.+ ..+.+++.+||+.||.+|||+.+++++-
T Consensus 235 ~~---~~~~~li~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 235 LS---DGSKDLISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp SC---HHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred CC---HHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence 12 3566788899999999999999999864
No 184
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.2e-40 Score=330.97 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=196.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|.+.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.. ++..++||||++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 99 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-DGKLWIMIEFCP 99 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-C-CEEEEEECCT
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-CCeEEEEEEeCC
Confidence 567789999999999999986 689999999976666667789999999999999999999999987 568999999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccccee
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVI 447 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 447 (580)
+++|.+++.... ..+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++....... ....
T Consensus 100 ~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 175 (302)
T 2j7t_A 100 GGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRD 175 (302)
T ss_dssp TEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC--
T ss_pred CCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-cccc
Confidence 999999987642 4589999999999999999999995 99999999999999999999999999876432221 1122
Q ss_pred eecCccccCCcccc-----ccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccC
Q 008031 448 ATAGALGYRAPELS-----KLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDA 522 (580)
Q Consensus 448 ~~~g~~~y~aPE~~-----~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (580)
...|+..|+|||.+ .+..++.++||||||+++|+|++|+.||...+..+ ....+.........
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~--------- 243 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR---VLLKIAKSDPPTLL--------- 243 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHHHSCCCCCS---------
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHHHHhccCCcccC---------
Confidence 34689999999987 46778999999999999999999999997654322 22222222111100
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 523 PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 523 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
........+.+++.+||+.||++|||+.+++++
T Consensus 244 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 244 -TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001112356788999999999999999999875
No 185
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.5e-40 Score=349.01 Aligned_cols=260 Identities=16% Similarity=0.221 Sum_probs=206.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+|+++++.++|++.+..+.++....+..++||||+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 566799999999999999974 799999998764432 3457889999999987655554444444467889999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee---CCCCCeEEeeccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL---DDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+++|.+++.... ..+++..++.++.||+.||+|||+. ||+||||||+|||+ +.++.+||+|||+++........
T Consensus 86 g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 86 GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 999999998642 4699999999999999999999995 99999999999999 57889999999999876544322
Q ss_pred ------ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhh
Q 008031 445 ------NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518 (580)
Q Consensus 445 ------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
......||..|+|||++.+..++.++|||||||++|||++|+.||.........+.+..+......... ..+
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--~~l 240 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI--EAL 240 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH--HHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH--HHH
Confidence 122457999999999999999999999999999999999999999988776666655554433221110 011
Q ss_pred hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcc
Q 008031 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRP 562 (580)
Q Consensus 519 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~ 562 (580)
.... ..++.+++.+||+.+|++||++.++++.|+++..
T Consensus 241 ~~~~------p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 241 CRGY------PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HTTS------CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred hcCC------cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1111 1367788999999999999999999999998743
No 186
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.1e-40 Score=331.63 Aligned_cols=250 Identities=24% Similarity=0.396 Sum_probs=204.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|...+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 102 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEYL 102 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEEeC
Confidence 566789999999999999875 789999999865432 345778999999999999999999999986 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
++++|.+++.. ..+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++........ ..
T Consensus 103 ~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 176 (303)
T 3a7i_A 103 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KR 176 (303)
T ss_dssp TTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-CB
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCCCCEEEeecccceecCcccc-cc
Confidence 99999999875 3589999999999999999999995 999999999999999999999999999976654322 22
Q ss_pred eeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 447 IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
....|++.|+|||.+.+..++.++||||||+++|+|++|+.||......+....+ ..... +.. ....
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~------~~~---~~~~- 243 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI---PKNNP------PTL---EGNY- 243 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSCC------CCC---CSSC-
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh---hcCCC------CCC---cccc-
Confidence 3456899999999999999999999999999999999999999765432222211 11110 001 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~ 560 (580)
...+.+++.+||+.||++|||+.|++++..-.
T Consensus 244 --~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 275 (303)
T 3a7i_A 244 --SKPLKEFVEACLNKEPSFRPTAKELLKHKFIL 275 (303)
T ss_dssp --CHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred --CHHHHHHHHHHcCCChhhCcCHHHHhhChhhh
Confidence 12567888899999999999999999976543
No 187
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.5e-41 Score=330.61 Aligned_cols=249 Identities=26% Similarity=0.392 Sum_probs=195.7
Q ss_pred hccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeCCCCC
Q 008031 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPHGS 370 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~g~ 370 (580)
..+||+|+||.||+|.+. +++.||+|.+........+.+.+|+.+++.++||||+++++++.. .+..++||||+++++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-NGFIKIFMEQVPGGS 105 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCSEEE
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-CCcEEEEEEeCCCCC
Confidence 458999999999999975 788999999976655556779999999999999999999999986 668999999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC-CCCeEEeecccccccccccccceeee
Q 008031 371 LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD-STNAKISDFGLSRLMTAAANVNVIAT 449 (580)
Q Consensus 371 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~ 449 (580)
|.+++........+++..+..++.|++.||+|||+. |++||||||+||+++. ++.+||+|||++........ .....
T Consensus 106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~ 183 (295)
T 2clq_A 106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETF 183 (295)
T ss_dssp HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCC
T ss_pred HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-ccccc
Confidence 999998764445678899999999999999999994 9999999999999987 89999999999986643222 12235
Q ss_pred cCccccCCccccccCC--CCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHH
Q 008031 450 AGALGYRAPELSKLKK--ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGD 527 (580)
Q Consensus 450 ~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (580)
.|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.......... ........ .+.. ...
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~-----~~~~---~~~--- 250 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM--FKVGMFKV-----HPEI---PES--- 250 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH--HHHHHHCC-----CCCC---CTT---
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH--Hhhccccc-----cccc---ccc---
Confidence 6899999999987643 7889999999999999999999997543221111 11000000 0011 111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 528 ELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 528 ~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
...++.+++.+||+.||++|||+.+++++
T Consensus 251 ~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 251 MSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp SCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 12356678889999999999999999875
No 188
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.3e-40 Score=339.37 Aligned_cols=250 Identities=24% Similarity=0.404 Sum_probs=199.5
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc--------cHHHHHHHHHHHhcC-CCCcceeeeeEEECCCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK--------GQREFESEVSLLGKI-RHPNLLALRAYYLGPKG 357 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 357 (580)
.|.+.+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|+.+++++ +||||+++++++.. .+
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~ 173 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES-SS 173 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB-SS
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee-CC
Confidence 3556789999999999999986 7999999998654321 134578999999999 89999999999986 66
Q ss_pred cEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccc
Q 008031 358 EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRL 437 (580)
Q Consensus 358 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~ 437 (580)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+||+|||++..
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~ 249 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFGFSCH 249 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence 899999999999999999864 3689999999999999999999995 999999999999999999999999999987
Q ss_pred cccccccceeeecCccccCCcccccc------CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccc
Q 008031 438 MTAAANVNVIATAGALGYRAPELSKL------KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTN 511 (580)
Q Consensus 438 ~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (580)
...... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... ....+......
T Consensus 250 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~- 323 (365)
T 2y7j_A 250 LEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL---MLRMIMEGQYQ- 323 (365)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHTCCC-
T ss_pred cCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHhCCCC-
Confidence 654322 234578999999998753 368889999999999999999999997644322 22222221111
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.....+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 324 --~~~~~~~~------~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 324 --FSSPEWDD------RSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp --CCHHHHSS------SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --CCCccccc------CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00011111 11356788999999999999999999985
No 189
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=337.83 Aligned_cols=261 Identities=22% Similarity=0.395 Sum_probs=204.8
Q ss_pred HhhhccccccCceEEEEEEe-----CCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCC-CcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATL-----EDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPK-GEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~lv 362 (580)
|.+.+.||+|+||.||+|.+ .+|+.||+|++........+.+.+|++++++++||||+++++++.... ...++|
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 56679999999999999984 368899999998765555678999999999999999999999987533 368999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.......
T Consensus 123 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT-KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp ECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred EECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh-CCEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 99999999999998752 458999999999999999999999 499999999999999999999999999998765433
Q ss_pred ccc--eeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCC---------CC---hhHHHHHHhhhh
Q 008031 443 NVN--VIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNG---------AE---LPQWVASIVKEE 508 (580)
Q Consensus 443 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~---------~~---~~~~~~~~~~~~ 508 (580)
... .....++..|+|||.+.+..++.++||||||+++|||++|..||..... .. ....+.......
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence 221 1223567789999999988899999999999999999999999763210 00 000011111110
Q ss_pred ccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 509 WTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
.. .+.......++.+++.+||+.||++|||+.|+++.|++++++
T Consensus 280 ~~-----------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 280 GR-----------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CC-----------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC-----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 00 011111223567888899999999999999999999998754
No 190
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.7e-41 Score=333.11 Aligned_cols=256 Identities=22% Similarity=0.352 Sum_probs=201.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEEC-CCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLG-PKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|... +|+.||+|.+..... ...+.+.+|+.++++++||||+++++++.. .....++|||
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 556789999999999999986 789999999865432 234568999999999999999999998854 3457899999
Q ss_pred eCCCCChhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----cccCCCCCCCeeeCCCCCeEEeeccccccc
Q 008031 365 YMPHGSLATFLHARG-PETPIDWPTRMKIIKGMTRGLLHLHSNEN-----IIHGNLTSSNVLLDDSTNAKISDFGLSRLM 438 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-----i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~ 438 (580)
|+++++|.+++.... ....+++..+..++.|++.||+|||+. + ++||||||+||+++.++.+||+|||++...
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 999999999997642 234589999999999999999999994 8 999999999999999999999999998765
Q ss_pred ccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhh
Q 008031 439 TAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518 (580)
Q Consensus 439 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
...... .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...+..+... .+..+... . .
T Consensus 167 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~i~~~~~~-~-----~ 236 (279)
T 2w5a_A 167 NHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG---KIREGKFR-R-----I 236 (279)
T ss_dssp ---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCC-C-----C
T ss_pred cccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHH---HHhhcccc-c-----C
Confidence 433221 123468899999999998899999999999999999999999998654322222 22221110 0 0
Q ss_pred hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhc
Q 008031 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIR 561 (580)
Q Consensus 519 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~ 561 (580)
.... ..++.+++.+||+.||++|||+.|++++++.-.
T Consensus 237 ---~~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 237 ---PYRY---SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp ---CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred ---Cccc---CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 0111 235668888999999999999999999876543
No 191
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.3e-40 Score=326.38 Aligned_cols=245 Identities=23% Similarity=0.374 Sum_probs=192.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. +|+.||+|++.... ......+.+|+.+++.++||||+++++++.. .+..++|||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 91 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-PTDFFMVME 91 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCeEEEEEe
Confidence 556799999999999999987 79999999986532 2334578999999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++++|.+++.... .+++..+..++.|++.||+|||+. |++|+||||+||+++.++.+||+|||++........
T Consensus 92 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 166 (276)
T 2h6d_A 92 YVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF- 166 (276)
T ss_dssp CCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred ccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECCCCCEEEeecccccccCCCcc-
Confidence 999999999997653 589999999999999999999995 999999999999999999999999999986644322
Q ss_pred ceeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 445 NVIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.....+++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||......+ ....+...... ...
T Consensus 167 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~----------~~~ 232 (276)
T 2h6d_A 167 -LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT---LFKKIRGGVFY----------IPE 232 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCC----------CCT
T ss_pred -eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---HHHHhhcCccc----------Cch
Confidence 223468899999999987765 579999999999999999999997644322 22222111100 011
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.. ...+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~---~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 233 YL---NRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hc---CHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11 1356678889999999999999999987
No 192
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=340.75 Aligned_cols=251 Identities=18% Similarity=0.234 Sum_probs=200.3
Q ss_pred HhhhccccccCceEEEEEE------eCCCCEEEEEEccccccccHHHHHHHHHHHhcCC---CCcceeeeeEEECCCCcE
Q 008031 289 CATAEIMGKSTYGTVYKAT------LEDGSQVAVKRLREKITKGQREFESEVSLLGKIR---HPNLLALRAYYLGPKGEK 359 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~ 359 (580)
|.+.+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++++++ |+||+++++++.. .+..
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~~~ 142 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QNGS 142 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SSCE
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-CCCc
Confidence 5567899999999999994 346889999998654 4557788888888887 9999999999987 5689
Q ss_pred EEEEeeCCCCChhhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC-----------CCC
Q 008031 360 LLVFDYMPHGSLATFLHARG--PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD-----------STN 426 (580)
Q Consensus 360 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~-----------~~~ 426 (580)
++||||+++|+|.+++.... ....+++..+..++.||+.||+|||+ .||+||||||+|||++. ++.
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~ 221 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD-CEIIHGDIKPDNFILGNGFLEQDDEDDLSAG 221 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT-TTEECCCCSGGGEEECGGGTCC------CTT
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEecccccCccccccccCC
Confidence 99999999999999997532 23569999999999999999999999 59999999999999998 899
Q ss_pred eEEeecccccccccc-cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHh
Q 008031 427 AKISDFGLSRLMTAA-ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIV 505 (580)
Q Consensus 427 ~kl~Dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 505 (580)
+||+|||+|+..... .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------- 293 (365)
T 3e7e_A 222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-------- 293 (365)
T ss_dssp EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--------
T ss_pred EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--------
Confidence 999999999765422 22233456799999999999999999999999999999999999999864332110
Q ss_pred hhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCC-CCHHHHHHHHhhhcccc
Q 008031 506 KEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSAR-PEVLQVVQQLEEIRPEA 564 (580)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R-ps~~ev~~~L~~~~~~~ 564 (580)
. ..... ...+ . ...+.+++..|++.+|.+| |++.++.+.|+++.++.
T Consensus 294 ----~---~~~~~-~~~~-~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 294 ----K---PEGLF-RRLP-H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ----E---ECSCC-TTCS-S---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----e---echhc-cccC-c---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0 00000 0111 1 2244567779999999999 68888999998876654
No 193
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3e-40 Score=344.34 Aligned_cols=196 Identities=22% Similarity=0.373 Sum_probs=163.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCC----CcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPK----GEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++.... ...|+
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 566799999999999999986 688999999975432 23467889999999999999999999997643 56899
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||++ |+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 108 v~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp EEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred EEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 999995 5999999764 4689999999999999999999995 9999999999999999999999999999876443
Q ss_pred ccc---------------------ceeeecCccccCCcccc-ccCCCCCcccchhHHHHHHHHHcCCCCC
Q 008031 442 ANV---------------------NVIATAGALGYRAPELS-KLKKANTKTDVYSLGVTILELLTGKSPG 489 (580)
Q Consensus 442 ~~~---------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~el~tg~~p~ 489 (580)
... ......||++|+|||++ ....++.++||||+||++|||++|..||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 211 23456799999999985 5667999999999999999999865554
No 194
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.7e-41 Score=335.81 Aligned_cols=257 Identities=23% Similarity=0.374 Sum_probs=182.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc-cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI-TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|.+.+.||+|+||.||+|.+. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 95 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-KDELWLVMKLL 95 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-SSCEEEEEECC
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-cCCcEEEehhc
Confidence 556789999999999999875 78999999986543 2334568899999999999999999999987 56899999999
Q ss_pred CCCChhhhhhhc-----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 367 PHGSLATFLHAR-----GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 367 ~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
++++|.+++... .....+++..+..++.||+.||+|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 999999998641 1234589999999999999999999995 9999999999999999999999999998765432
Q ss_pred cc----cceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccc---cc
Q 008031 442 AN----VNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTN---EV 513 (580)
Q Consensus 442 ~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~ 513 (580)
.. .......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||......+.... ........ ..
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~ 251 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML---TLQNDPPSLETGV 251 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH---HHTSSCCCTTC--
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH---HhccCCCcccccc
Confidence 21 11223468999999999875 5689999999999999999999999987654332221 11111100 00
Q ss_pred cchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 514 FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.+... .... ..++.+++.+||+.||.+|||+.|++++
T Consensus 252 ~~~~~---~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 252 QDKEM---LKKY---GKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ---CC---CCCC---CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccchh---hhhh---hHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01111 1111 2356788889999999999999999985
No 195
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.3e-41 Score=339.59 Aligned_cols=267 Identities=22% Similarity=0.289 Sum_probs=202.7
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECC-------CC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGP-------KG 357 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------~~ 357 (580)
.|.+.+.||+|+||.||+|.+. +|+.||+|++..... .....+.+|++++++++||||+++++++... .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 3667899999999999999985 799999999865432 2345788999999999999999999999763 34
Q ss_pred cEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccc
Q 008031 358 EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRL 437 (580)
Q Consensus 358 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~ 437 (580)
..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 68999999975 787777654 24589999999999999999999994 999999999999999999999999999986
Q ss_pred ccccc---ccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc-
Q 008031 438 MTAAA---NVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE- 512 (580)
Q Consensus 438 ~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 512 (580)
..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+...........
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 253 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 64322 122234568999999998875 5689999999999999999999999987655444444433222111100
Q ss_pred --ccchhhh-------ccCCCcHHH------HHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 513 --VFDLELM-------RDAPTIGDE------LLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 513 --~~~~~~~-------~~~~~~~~~------~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
....... ......... ...+.+++.+||+.||++|||+.|++++=.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 0000000 000111111 134778999999999999999999998743
No 196
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=8.7e-41 Score=328.93 Aligned_cols=253 Identities=22% Similarity=0.398 Sum_probs=201.6
Q ss_pred HHHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEEC-----------
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG----------- 354 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----------- 354 (580)
..|...+.||+|+||.||+|.+. +++.||+|.++... ..+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 34677899999999999999987 79999999986442 356789999999999999999998853
Q ss_pred ----CCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEe
Q 008031 355 ----PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKIS 430 (580)
Q Consensus 355 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~ 430 (580)
.....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEEC
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEEcCCCCEEEC
Confidence 1234789999999999999997642 34689999999999999999999995 99999999999999999999999
Q ss_pred ecccccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcc
Q 008031 431 DFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWT 510 (580)
Q Consensus 431 Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 510 (580)
|||++........ .....|++.|+|||.+.+..++.++||||||+++|+|++|..|+... ......... ..
T Consensus 165 Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~~~~~-~~- 235 (284)
T 2a19_B 165 DFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFFTDLRD-GI- 235 (284)
T ss_dssp CCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHHHHHHT-TC-
T ss_pred cchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHHHHhhc-cc-
Confidence 9999987654322 22346899999999999999999999999999999999999886321 111111111 10
Q ss_pred ccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccc
Q 008031 511 NEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATA 567 (580)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~ 567 (580)
.. ...+ ..+.+++.+||+.||++|||+.|++++|+.++......
T Consensus 236 ---~~-------~~~~---~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 236 ---IS-------DIFD---KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp ---CC-------TTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred ---cc-------ccCC---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 00 1111 24667888999999999999999999999998665443
No 197
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.4e-40 Score=352.30 Aligned_cols=250 Identities=28% Similarity=0.372 Sum_probs=199.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-------------ccHHHHHHHHHHHhcCCCCcceeeeeEEEC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-------------KGQREFESEVSLLGKIRHPNLLALRAYYLG 354 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 354 (580)
|.+.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 117 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED 117 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 667899999999999999986 688999999865321 234678999999999999999999999987
Q ss_pred CCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC---CeEEee
Q 008031 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST---NAKISD 431 (580)
Q Consensus 355 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~---~~kl~D 431 (580)
....++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++ .+||+|
T Consensus 118 -~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 118 -KKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred -CCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 66899999999999999999765 3589999999999999999999994 999999999999998765 699999
Q ss_pred cccccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccc
Q 008031 432 FGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTN 511 (580)
Q Consensus 432 fg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (580)
||++........ .....||+.|+|||++. ..++.++||||+||++|+|++|+.||.+.+..+....+ ......
T Consensus 193 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~~~~~~- 265 (504)
T 3q5i_A 193 FGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV---EKGKYY- 265 (504)
T ss_dssp CTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHCCCC-
T ss_pred CCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HcCCCC-
Confidence 999987654322 23456999999999987 56999999999999999999999999876543333322 222111
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
.+...+.. . ..++.+++.+||+.||.+|||+.|++++-.
T Consensus 266 --~~~~~~~~---~---s~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 266 --FDFNDWKN---I---SDEAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp --CCHHHHTT---S---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred --CCccccCC---C---CHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 11111111 1 135678888999999999999999998743
No 198
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.8e-41 Score=342.57 Aligned_cols=263 Identities=22% Similarity=0.360 Sum_probs=201.0
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|...+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.++++++||||+++++++.. ++..++||||+
T Consensus 35 y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 113 (360)
T 3eqc_A 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHM 113 (360)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-TTEEEEEECCC
T ss_pred ceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-CCEEEEEEECC
Confidence 556789999999999999987 789999999875533 234678999999999999999999999986 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
++++|.+++...+ .+++..+..++.|++.||+|||+..||+||||||+||+++.++.+||+|||++....... .
T Consensus 114 ~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~ 187 (360)
T 3eqc_A 114 DGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---A 187 (360)
T ss_dssp TTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred CCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---c
Confidence 9999999998753 589999999999999999999982289999999999999999999999999987553322 2
Q ss_pred eeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcc----------------
Q 008031 447 IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWT---------------- 510 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---------------- 510 (580)
....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+..+....+.........
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 2356899999999999999999999999999999999999999765433222111100000000
Q ss_pred ----------ccccchhhhccCCCc--HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 511 ----------NEVFDLELMRDAPTI--GDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 511 ----------~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
....+.......+.. .....++.+++.+||+.||++|||+.|+++|-.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 000000000000000 011235778899999999999999999998753
No 199
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=338.11 Aligned_cols=261 Identities=20% Similarity=0.296 Sum_probs=195.0
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCC-----CcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPK-----GEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~~ 360 (580)
|...+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+++++.++||||+++++++.... ...+
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 566789999999999999985 799999999864322 23456889999999999999999999997632 3469
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+||||+ +++|.+++... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 107 lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 999999 88999999763 589999999999999999999994 999999999999999999999999999986543
Q ss_pred ccccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhh---cccc----
Q 008031 441 AANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEE---WTNE---- 512 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~---- 512 (580)
. .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+....... ....
T Consensus 181 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~ 256 (367)
T 1cm8_A 181 E----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD 256 (367)
T ss_dssp S----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred c----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhH
Confidence 2 223568999999998876 689999999999999999999999998755433222222111000 0000
Q ss_pred -----------ccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--Hhhhcc
Q 008031 513 -----------VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ--LEEIRP 562 (580)
Q Consensus 513 -----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~--L~~~~~ 562 (580)
.....+....+. ....+.+++.+||+.||++|||+.|+++| ++.+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 257 EAKNYMKGLPELEKKDFASILTN---ASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316 (367)
T ss_dssp HHHHHHHHSCCCCCCCGGGTCTT---CCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred HHHHHHHhCCCCCCCCHHHHCCC---CCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence 000000001111 12356788899999999999999999996 444443
No 200
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.1e-40 Score=338.09 Aligned_cols=260 Identities=23% Similarity=0.322 Sum_probs=202.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCC----CcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPK----GEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~~lv 362 (580)
|.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.... ...++|
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 567899999999999999976 788999999875332 23367889999999999999999999997532 468999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||++ |+|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.......
T Consensus 109 ~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 109 QDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 99996 5999998764 589999999999999999999994 99999999999999999999999999998765432
Q ss_pred ccc--eeeecCccccCCccccc-cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccc---cccch
Q 008031 443 NVN--VIATAGALGYRAPELSK-LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTN---EVFDL 516 (580)
Q Consensus 443 ~~~--~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 516 (580)
... .....||+.|+|||++. +..++.++||||+||++|+|++|+.||...+..+....+.......... ...+.
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 221 23457899999999865 4558999999999999999999999998776655544443322111000 00000
Q ss_pred ---------------hhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 517 ---------------ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 517 ---------------~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
......+.. ..++.+++.+||+.||++|||+.|++++=
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNA---DSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hHHHHHHhcCCccCCCHHHhCCCC---CHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000000111 23567899999999999999999999864
No 201
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.4e-41 Score=345.13 Aligned_cols=269 Identities=21% Similarity=0.341 Sum_probs=196.0
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC-----cEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKG-----EKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----~~~lv~ 363 (580)
|...+.||+|+||.||+|.+..+..||+|++..... ...+|+++++.++||||+++++++..... ..++||
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 567899999999999999998777799998754322 22469999999999999999999965322 278999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC-CCCCeEEeeccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD-DSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~-~~~~~kl~Dfg~~~~~~~~~ 442 (580)
||++++.+............+++..+..++.||+.||+|||+. ||+||||||+|||++ .++.+||+|||+++......
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 9997754433332222245699999999999999999999994 999999999999999 78999999999998764332
Q ss_pred ccceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcc-------cccc
Q 008031 443 NVNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWT-------NEVF 514 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 514 (580)
. .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+....+.+....... ....
T Consensus 197 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 197 P--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp C--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred C--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2 2235689999999988654 5899999999999999999999999876543333222221110000 0000
Q ss_pred chhhhccCCCc------HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--Hhhhcccc
Q 008031 515 DLELMRDAPTI------GDELLNTLKLALHCVDPSPSARPEVLQVVQQ--LEEIRPEA 564 (580)
Q Consensus 515 ~~~~~~~~~~~------~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~--L~~~~~~~ 564 (580)
+.......+.. .....++.+++.+||+.||++|||+.|+++| +++++...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 332 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE 332 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence 00000000000 0012367789999999999999999999987 55555433
No 202
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.4e-40 Score=364.03 Aligned_cols=246 Identities=22% Similarity=0.335 Sum_probs=201.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccc---cccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKI---TKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++... ....+.+..|..++..+ +||+|+++++++.+ .+..|+||
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~-~~~~~lV~ 421 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLYFVM 421 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-SSEEEEEE
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-CCEEEEEE
Confidence 556789999999999999986 68899999997542 23446688899999998 79999999999876 66899999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++|+|.++++..+ .+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 422 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~- 496 (674)
T 3pfq_A 422 EYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG- 496 (674)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-
T ss_pred eCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCCcEEEeecceeeccccCC-
Confidence 9999999999998753 689999999999999999999994 99999999999999999999999999998543222
Q ss_pred cceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCC
Q 008031 444 VNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAP 523 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (580)
.......||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+..++ ...+...... . ..
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~~~-------~---p~ 563 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---FQSIMEHNVA-------Y---PK 563 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHSSCCC-------C---CT
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH---HHHHHhCCCC-------C---Cc
Confidence 223356799999999999999999999999999999999999999987554333 2333222110 0 11
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 008031 524 TIGDELLNTLKLALHCVDPSPSARPEV-----LQVVQQ 556 (580)
Q Consensus 524 ~~~~~~~~l~~li~~cl~~~P~~Rps~-----~ev~~~ 556 (580)
. ...++.+++.+||+.||++||++ .|+++|
T Consensus 564 ~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 564 S---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp T---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred c---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1 12356788889999999999998 777764
No 203
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6.9e-41 Score=337.27 Aligned_cols=261 Identities=25% Similarity=0.336 Sum_probs=196.8
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
.|...+.||+|+||.||+|.+. +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 104 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLVFE 104 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-CCEEEEEEe
Confidence 3667899999999999999986 6899999998654332 23557899999999999999999999986 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++........
T Consensus 105 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 179 (331)
T 4aaa_A 105 FVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 179 (331)
T ss_dssp CCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred cCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-
Confidence 99999888876653 3589999999999999999999994 999999999999999999999999999976544322
Q ss_pred ceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhh------------hccc
Q 008031 445 NVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE------------EWTN 511 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~------------~~~~ 511 (580)
......|+..|+|||.+.+. .++.++||||+||++|+|++|+.||......+....+...... ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 22345689999999998765 7899999999999999999999999876543322222211100 0000
Q ss_pred cccchhhh------ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 512 EVFDLELM------RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 512 ~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
....+... ...+. ....+.+++.+||+.||++|||+.|++++-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 308 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPK---LSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTT---SCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred cccCccccccchhhhcccc---hhHHHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 00000000 00111 124577889999999999999999999863
No 204
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.1e-40 Score=363.76 Aligned_cols=257 Identities=21% Similarity=0.353 Sum_probs=203.9
Q ss_pred HHHhhhccccccCceEEEEEEeC----CCCEEEEEEccccccc-cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEE
Q 008031 287 LLCATAEIMGKSTYGTVYKATLE----DGSQVAVKRLREKITK-GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~l 361 (580)
..|.+.+.||+|+||.||+|.+. .+..||+|.++..... ..+.+.+|+.++++++||||+++++++. ++..++
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~~~~l 467 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWI 467 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--cCceEE
Confidence 34667889999999999999874 2457999998754332 3467899999999999999999999985 457899
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999864 24589999999999999999999995 9999999999999999999999999999876554
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
.........+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+ .......
T Consensus 545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i---~~~~~~~--------- 612 (656)
T 2j0j_A 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI---ENGERLP--------- 612 (656)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HHTCCCC---------
T ss_pred cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---HcCCCCC---------
Confidence 4333334457789999999998999999999999999999997 99999876543333222 2211110
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccc
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPE 563 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~ 563 (580)
..+.. ...+.+++.+||+.||++|||+.++++.|+.+.++
T Consensus 613 ~~~~~---~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 613 MPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCccc---cHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 01111 23566888899999999999999999999998654
No 205
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.2e-41 Score=332.44 Aligned_cols=259 Identities=26% Similarity=0.359 Sum_probs=195.1
Q ss_pred HHhhhccccccCceEEEEEEeC--CCC--EEEEEEccccc---cccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE--DGS--QVAVKRLREKI---TKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKL 360 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 360 (580)
.|.+.+.||+|+||.||+|.+. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.. +..+
T Consensus 19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 96 (291)
T 1u46_A 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPMK 96 (291)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCE
T ss_pred HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc--CCce
Confidence 3567899999999999999863 333 68999987543 2234678999999999999999999999975 3589
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 9999999999999997642 3589999999999999999999995 999999999999999999999999999987654
Q ss_pred cccc--ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccchh
Q 008031 441 AANV--NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDLE 517 (580)
Q Consensus 441 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (580)
.... ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...+..+ ....+.......
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~~~~~~------ 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ---ILHKIDKEGERL------ 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHHHTSCCCC------
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH---HHHHHHccCCCC------
Confidence 3322 1223457788999999998889999999999999999999 999997655332 222222211110
Q ss_pred hhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccc
Q 008031 518 LMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAA 565 (580)
Q Consensus 518 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~ 565 (580)
.... ....++.+++.+||+.||++|||+.++++.|+++.+...
T Consensus 245 --~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 245 --PRPE---DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp --CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred --CCCc---CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 0011 122357788899999999999999999999999876543
No 206
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=329.67 Aligned_cols=250 Identities=24% Similarity=0.369 Sum_probs=198.3
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
.|...+.||+|+||.||+|.+. +|+.||+|.+... .....+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 30 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 106 (314)
T 3com_A 30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVMEYC 106 (314)
T ss_dssp CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred hhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEeecC
Confidence 3567889999999999999986 6999999998653 234678999999999999999999999986 66899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccce
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNV 446 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 446 (580)
++++|.+++... ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++........ ..
T Consensus 107 ~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~ 182 (314)
T 3com_A 107 GAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-KR 182 (314)
T ss_dssp TTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-CB
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-cc
Confidence 999999999743 24689999999999999999999995 999999999999999999999999999976644322 22
Q ss_pred eeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcH
Q 008031 447 IATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIG 526 (580)
Q Consensus 447 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (580)
....|+..|+|||.+.+..++.++||||||+++|+|++|+.||....... ........ ....... ..
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~-~~~~~~~---------~~ 249 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR---AIFMIPTN-PPPTFRK---------PE 249 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHHHS-CCCCCSS---------GG
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHhcC-CCcccCC---------cc
Confidence 34568999999999999999999999999999999999999997654322 11111111 1101000 01
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 527 DELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 527 ~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.....+.+++.+||+.||++|||+.+++++-
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~ 280 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHP 280 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 1123567889999999999999999998854
No 207
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.4e-40 Score=326.51 Aligned_cols=260 Identities=24% Similarity=0.342 Sum_probs=197.0
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|...+.||+|+||.||+|... +|+.||+|+++.... .....+.+|+.++++++||||+++++++.. ++..++||||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 83 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVFEF 83 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-CCceEEEEEc
Confidence 456789999999999999986 799999999865432 234678899999999999999999999986 6689999999
Q ss_pred CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccc
Q 008031 366 MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVN 445 (580)
Q Consensus 366 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 445 (580)
++ ++|.+++.... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.........
T Consensus 84 ~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~- 159 (299)
T 2r3i_A 84 LH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT- 159 (299)
T ss_dssp CS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC-
T ss_pred cc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc-
Confidence 97 69999997653 34588999999999999999999995 9999999999999999999999999998765432221
Q ss_pred eeeecCccccCCccccccCC-CCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc--------ccch
Q 008031 446 VIATAGALGYRAPELSKLKK-ANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE--------VFDL 516 (580)
Q Consensus 446 ~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 516 (580)
.....+|+.|+|||.+.+.. ++.++||||||+++|+|++|+.||...+..+....+........... ...+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccch
Confidence 12345789999999987655 78999999999999999999999987554332222221111000000 0000
Q ss_pred hh--------hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 517 EL--------MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 517 ~~--------~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.. ....+.. ..++.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 240 SFPKWARQDFSKVVPPL---DEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TSCCCCCCCHHHHSTTC---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhcccchhhHhhCCCC---CHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 0000111 2356788899999999999999999985
No 208
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.6e-40 Score=338.14 Aligned_cols=261 Identities=21% Similarity=0.233 Sum_probs=190.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCC-----CcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPK-----GEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~~ 360 (580)
|...+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.... ...+
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 567899999999999999976 788999999865322 23456889999999999999999999997633 2679
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+||||++ |+|.+++.. .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 107 lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 107 IVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EEEECCS-EEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EEEEcCC-CCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 9999996 478888863 488999999999999999999995 999999999999999999999999999986543
Q ss_pred ccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhc-----------
Q 008031 441 AANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW----------- 509 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 509 (580)
.. ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+..+....+........
T Consensus 180 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 180 SF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred cc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 22 22345689999999999999999999999999999999999999987543222211111000000
Q ss_pred ------cccccchhhh---c--cCCC----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 510 ------TNEVFDLELM---R--DAPT----IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 510 ------~~~~~~~~~~---~--~~~~----~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
.......... . ..+. ......++.+++.+||+.||++|||+.|+++|=.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 0000000000 0 0000 0112456789999999999999999999999753
No 209
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.1e-40 Score=346.15 Aligned_cols=262 Identities=21% Similarity=0.305 Sum_probs=192.2
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECC-----CCcEEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGP-----KGEKLL 361 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~~l 361 (580)
.|...+.||+|+||.||+|.+. +|+.||||++.... ..+.+|++++++++||||+++++++... ....++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 3667899999999999999986 69999999986432 2235799999999999999999998542 113679
Q ss_pred EEeeCCCCChhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC-CCeEEeecccccccc
Q 008031 362 VFDYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS-TNAKISDFGLSRLMT 439 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~-~~~kl~Dfg~~~~~~ 439 (580)
||||+++ ++.+.+... .....+++..+..++.||++||+|||+ .||+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT-TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9999975 676665431 223569999999999999999999999 599999999999999955 568999999998664
Q ss_pred cccccceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcc-------c
Q 008031 440 AAANVNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWT-------N 511 (580)
Q Consensus 440 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~ 511 (580)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+..+....+......... .
T Consensus 209 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~ 286 (420)
T 1j1b_A 209 RGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286 (420)
T ss_dssp TTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCS
T ss_pred cCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 3322 2235689999999988754 7899999999999999999999999875533322222211110000 0
Q ss_pred cccchhhhccCCC------cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 512 EVFDLELMRDAPT------IGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 512 ~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
...+..+...... ......++.+|+.+||+.||++|||+.|+++|-
T Consensus 287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 0000000000000 001124677899999999999999999999864
No 210
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.4e-40 Score=339.42 Aligned_cols=260 Identities=22% Similarity=0.277 Sum_probs=200.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCC--------CCcceeeeeEEEC---CC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIR--------HPNLLALRAYYLG---PK 356 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~~---~~ 356 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++.. ....+.+.+|++++++++ |+||+++++++.. ..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~ 117 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG 117 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence 667899999999999999875 6889999998743 233467889999999985 7889999999873 24
Q ss_pred CcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-CcccCCCCCCCeeeCCCC----------
Q 008031 357 GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE-NIIHGNLTSSNVLLDDST---------- 425 (580)
Q Consensus 357 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-~i~H~Dlk~~Nil~~~~~---------- 425 (580)
...++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+ + ||+||||||+|||++.++
T Consensus 118 ~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~-~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 118 THICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHH-TTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred ceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 4789999999 667777776542 3468999999999999999999998 5 999999999999999775
Q ss_pred ---------------------------------------CeEEeecccccccccccccceeeecCccccCCccccccCCC
Q 008031 426 ---------------------------------------NAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKA 466 (580)
Q Consensus 426 ---------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 466 (580)
.+||+|||++...... .....||+.|+|||++.+..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSCC
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCCCC
Confidence 7999999999866433 223468999999999999999
Q ss_pred CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHH---HHHHhh---h---------hccccccch---------------
Q 008031 467 NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQW---VASIVK---E---------EWTNEVFDL--------------- 516 (580)
Q Consensus 467 ~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~---~~~~~~---~---------~~~~~~~~~--------------- 516 (580)
+.++|||||||++|||++|+.||...+..+.... +..+.. . ......+..
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 9999999999999999999999987665442221 111111 0 000000000
Q ss_pred --hhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 517 --ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 517 --~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.+.............+.+++.+||+.||++|||+.|+++|
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0001112234556678899999999999999999999975
No 211
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.7e-40 Score=345.58 Aligned_cols=261 Identities=22% Similarity=0.287 Sum_probs=199.2
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcC------CCCcceeeeeEEECCCCcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKI------RHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++... .....+.+|+++++.+ +|+||+++++++.. .+..++
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~l 176 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNHICM 176 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCeEEE
Confidence 667899999999999999876 68899999987532 2345677788888776 57799999999986 568999
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC--eEEeecccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN--AKISDFGLSRLMT 439 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~--~kl~Dfg~~~~~~ 439 (580)
||||+. ++|.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++. +||+|||+++...
T Consensus 177 v~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 999995 69999998753 34589999999999999999999994 9999999999999998887 9999999997543
Q ss_pred cccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhc---------c
Q 008031 440 AAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW---------T 510 (580)
Q Consensus 440 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~ 510 (580)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+....+........ .
T Consensus 254 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~ 329 (429)
T 3kvw_A 254 QR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRA 329 (429)
T ss_dssp CC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTH
T ss_pred Cc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhh
Confidence 32 2235689999999999999999999999999999999999999987654433332222111000 0
Q ss_pred ccccchhhh--------------------------ccCC---CcHH-----HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 511 NEVFDLELM--------------------------RDAP---TIGD-----ELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 511 ~~~~~~~~~--------------------------~~~~---~~~~-----~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
...++.... ...+ .... ....+.+++.+||+.||++|||+.|+++|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~H 409 (429)
T 3kvw_A 330 KNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRH 409 (429)
T ss_dssp HHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCC
Confidence 000000000 0000 0000 12457789999999999999999999986
Q ss_pred Hh
Q 008031 557 LE 558 (580)
Q Consensus 557 L~ 558 (580)
=.
T Consensus 410 pw 411 (429)
T 3kvw_A 410 PW 411 (429)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 212
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=340.60 Aligned_cols=264 Identities=22% Similarity=0.311 Sum_probs=182.6
Q ss_pred hccccccCceEEEEEEeC---CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEEC-CCCcEEEEEeeCC
Q 008031 292 AEIMGKSTYGTVYKATLE---DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG-PKGEKLLVFDYMP 367 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~~lv~e~~~ 367 (580)
+++||+|+||.||+|.+. +++.||||++.... ....+.+|+.++++++||||+++++++.. .....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999965 57889999986442 23568899999999999999999999964 3557899999996
Q ss_pred CCChhhhhhhcC------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee----CCCCCeEEeecccccc
Q 008031 368 HGSLATFLHARG------PETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL----DDSTNAKISDFGLSRL 437 (580)
Q Consensus 368 ~g~L~~~l~~~~------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~----~~~~~~kl~Dfg~~~~ 437 (580)
|+|.+++.... ....+++..+..++.||+.||+|||+. ||+||||||+|||+ +.++.+||+|||+++.
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 181 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence 58888875321 123489999999999999999999995 99999999999999 6778999999999987
Q ss_pred cccccc--cceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCC------hhHHHHHHhhh-
Q 008031 438 MTAAAN--VNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAE------LPQWVASIVKE- 507 (580)
Q Consensus 438 ~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~------~~~~~~~~~~~- 507 (580)
...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....+..+...
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~ 261 (405)
T 3rgf_A 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261 (405)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHH
T ss_pred cCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhh
Confidence 654322 22334578999999999876 458999999999999999999999997654320 01111111110
Q ss_pred --hccccccch---------------hhhccCCCcH--------HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 008031 508 --EWTNEVFDL---------------ELMRDAPTIG--------DELLNTLKLALHCVDPSPSARPEVLQVVQQLEEI 560 (580)
Q Consensus 508 --~~~~~~~~~---------------~~~~~~~~~~--------~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~ 560 (580)
.....+.+. ..... .... .....+.+|+.+||+.||++|||+.|+++|=.-.
T Consensus 262 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~ 338 (405)
T 3rgf_A 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTN-CSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL 338 (405)
T ss_dssp CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTT-CCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred CCCChhhcchhhcCcchhhhhhhccccCCCc-chhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhc
Confidence 000000000 00000 0000 0023567899999999999999999999986543
No 213
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.3e-40 Score=335.98 Aligned_cols=259 Identities=18% Similarity=0.286 Sum_probs=200.3
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccccc-----------------HHHHHHHHHHHhcCCCCcceeeeeE
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKG-----------------QREFESEVSLLGKIRHPNLLALRAY 351 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~~~~~ 351 (580)
|.+.+.||+|+||.||+|.+ +|+.||+|.+....... .+.+.+|+.++++++||||++++++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 111 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEE
T ss_pred eEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 56789999999999999999 89999999986543221 1789999999999999999999999
Q ss_pred EECCCCcEEEEEeeCCCCChhhh------hhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccCCCCCCCeeeCCC
Q 008031 352 YLGPKGEKLLVFDYMPHGSLATF------LHARGPETPIDWPTRMKIIKGMTRGLLHLHS-NENIIHGNLTSSNVLLDDS 424 (580)
Q Consensus 352 ~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~i~H~Dlk~~Nil~~~~ 424 (580)
+.. .+..++||||+++|+|.++ +.... ...+++..+..++.|++.||+|||+ . |++||||||+||+++.+
T Consensus 112 ~~~-~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 112 ITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDKN 188 (348)
T ss_dssp EES-SSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS-CEECCCCCGGGEEECTT
T ss_pred Eee-CCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC-CEeecCCChHhEEEcCC
Confidence 987 5689999999999999999 55421 3569999999999999999999998 5 99999999999999999
Q ss_pred CCeEEeecccccccccccccceeeecCccccCCccccccC-CCCC-cccchhHHHHHHHHHcCCCCCCCCCCCChhHHHH
Q 008031 425 TNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLK-KANT-KTDVYSLGVTILELLTGKSPGEPLNGAELPQWVA 502 (580)
Q Consensus 425 ~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~ 502 (580)
+.+||+|||++...... ......|+..|+|||.+.+. .++. ++||||+|+++|||++|+.||...... .....
T Consensus 189 ~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~ 263 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VELFN 263 (348)
T ss_dssp SCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHHHH
T ss_pred CcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHH
Confidence 99999999999865433 23345689999999999877 6666 999999999999999999999876542 12222
Q ss_pred HHhhhhccccc----cchhhhcc--CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 503 SIVKEEWTNEV----FDLELMRD--APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 503 ~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.+......... ........ ..........+.+++.+||+.||.+|||+.|++++
T Consensus 264 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22211110000 00000000 00001112356788889999999999999999985
No 214
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.3e-40 Score=328.94 Aligned_cols=249 Identities=24% Similarity=0.339 Sum_probs=194.2
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--------ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCc
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--------KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGE 358 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 358 (580)
.|.+.+.||+|+||.||+|.+. +++.||||++..... .....+.+|++++++++||||+++++++.. +.
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~ 88 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--ED 88 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--SS
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--Cc
Confidence 4778899999999999999986 688999999864321 122358899999999999999999999975 35
Q ss_pred EEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC---eEEeecccc
Q 008031 359 KLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN---AKISDFGLS 435 (580)
Q Consensus 359 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~---~kl~Dfg~~ 435 (580)
.++||||+++++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++. +||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 89999999999999998754 4689999999999999999999995 9999999999999986654 999999999
Q ss_pred cccccccccceeeecCccccCCccccc---cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCC-ChhHHHHHHhhhhccc
Q 008031 436 RLMTAAANVNVIATAGALGYRAPELSK---LKKANTKTDVYSLGVTILELLTGKSPGEPLNGA-ELPQWVASIVKEEWTN 511 (580)
Q Consensus 436 ~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~ 511 (580)
........ .....||+.|+|||++. ...++.++|||||||++|+|++|+.||...... .....+.. ....
T Consensus 165 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~- 238 (322)
T 2ycf_A 165 KILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS---GKYN- 238 (322)
T ss_dssp EECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH---TCCC-
T ss_pred eecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh---Cccc-
Confidence 87643321 12346899999999863 567889999999999999999999999765443 22222211 1100
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..+..... ....+.+++.+||+.||++|||+.+++++
T Consensus 239 --~~~~~~~~------~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 239 --FIPEVWAE------VSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp --CCHHHHTT------SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --cCchhhhh------cCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 01111111 12356788999999999999999999864
No 215
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.2e-40 Score=326.46 Aligned_cols=249 Identities=25% Similarity=0.363 Sum_probs=199.1
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---------ccHHHHHHHHHHHhcCC-CCcceeeeeEEECCCC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---------KGQREFESEVSLLGKIR-HPNLLALRAYYLGPKG 357 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 357 (580)
|...+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+++++++. ||||+++++++.. ++
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~-~~ 97 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET-NT 97 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SS
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc-CC
Confidence 556789999999999999986 689999999864321 12346789999999995 9999999999986 66
Q ss_pred cEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccc
Q 008031 358 EKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRL 437 (580)
Q Consensus 358 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~ 437 (580)
..++||||+++++|.+++... ..+++..+..++.||+.||+|||+. |++||||+|+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 899999999999999999864 3689999999999999999999995 999999999999999999999999999986
Q ss_pred cccccccceeeecCccccCCccccc------cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccc
Q 008031 438 MTAAANVNVIATAGALGYRAPELSK------LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTN 511 (580)
Q Consensus 438 ~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (580)
...... .....+++.|+|||++. ...++.++||||||+++|+|++|+.||...+..+ ....+.......
T Consensus 174 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~ 248 (298)
T 1phk_A 174 LDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML---MLRMIMSGNYQF 248 (298)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHTCCCC
T ss_pred cCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH---HHHHHhcCCccc
Confidence 654322 23356899999999874 4568899999999999999999999997654322 222222221110
Q ss_pred cccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 512 EVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
. .+........+.+++.+||+.||++|||+.|++++
T Consensus 249 ---~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 249 ---G------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp ---C------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ---C------cccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 0 01111122367788999999999999999999874
No 216
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.5e-40 Score=335.98 Aligned_cols=259 Identities=23% Similarity=0.288 Sum_probs=182.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECC-----CCcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGP-----KGEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~~ 360 (580)
|...+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+++++.++||||+++++++... ....+
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 567899999999999999975 789999999865322 2345688999999999999999999999753 24579
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+|+||+ +++|.+++.. ..+++..+..++.||++||+|||+ .||+||||||+||+++.++.+||+|||+++....
T Consensus 111 lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp EEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred EEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 999999 7899998875 358999999999999999999999 4999999999999999999999999999986543
Q ss_pred ccccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhh---ccccccch
Q 008031 441 AANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEE---WTNEVFDL 516 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 516 (580)
. .....||..|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+....... ....+...
T Consensus 185 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~ 260 (367)
T 2fst_X 185 E----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260 (367)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred c----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence 2 234568999999999876 678999999999999999999999998765433333322221110 00000000
Q ss_pred -------hhhccCCCcH-----HHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 517 -------ELMRDAPTIG-----DELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 517 -------~~~~~~~~~~-----~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.+........ .....+.+++.+||+.||++|||+.|+++|-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 0000000000 0123567899999999999999999999873
No 217
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.9e-40 Score=323.14 Aligned_cols=247 Identities=18% Similarity=0.286 Sum_probs=195.4
Q ss_pred HHHHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEE
Q 008031 286 DLLCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 286 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~l 361 (580)
...|...+.||+|+||.||+|.+. +++.||+|+++.... .....+.+|+..+.++ +||||+++++++.+ ++..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-DDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-TTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEE
Confidence 345778899999999999999986 799999999875432 3346788999999999 99999999999986 668999
Q ss_pred EEeeCCCCChhhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC----------------
Q 008031 362 VFDYMPHGSLATFLHARGP-ETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS---------------- 424 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~---------------- 424 (580)
||||+++++|.+++..... ...+++..+..++.||+.||+|||+. ||+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC------------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 9999999999999976421 24689999999999999999999994 99999999999999844
Q ss_pred ---CCeEEeecccccccccccccceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHH
Q 008031 425 ---TNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQW 500 (580)
Q Consensus 425 ---~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~ 500 (580)
..+||+|||.+....... ...||..|+|||.+.+. .++.++|||||||++|+|++|..|+.... .
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~--- 236 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---Q--- 236 (289)
T ss_dssp --CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---H---
T ss_pred CCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---H---
Confidence 479999999998665432 23489999999998765 56679999999999999999998764321 1
Q ss_pred HHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 501 VASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
...+...... .. ....+ ..+.+++.+||+.||++|||+.|++++-
T Consensus 237 ~~~~~~~~~~------~~---~~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 237 WHEIRQGRLP------RI---PQVLS---QEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp HHHHHTTCCC------CC---SSCCC---HHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred HHHHHcCCCC------CC---CcccC---HHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 1111111110 00 11112 3566788899999999999999998763
No 218
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-40 Score=339.39 Aligned_cols=258 Identities=19% Similarity=0.278 Sum_probs=192.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECC------------
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGP------------ 355 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------------ 355 (580)
|...+.||+|+||.||+|.+. +|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 567899999999999999975 79999999886432 2234799999999999999999998542
Q ss_pred -------------------------CCcEEEEEeeCCCCChhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCc
Q 008031 356 -------------------------KGEKLLVFDYMPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSNENI 409 (580)
Q Consensus 356 -------------------------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i 409 (580)
....++||||++ |+|.+.+... .....+++..+..++.||+.||+|||+ .||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~gi 162 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-LGI 162 (383)
T ss_dssp -------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT-TTE
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CcC
Confidence 223789999997 5888777642 123569999999999999999999999 499
Q ss_pred ccCCCCCCCeeeC-CCCCeEEeecccccccccccccceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCC
Q 008031 410 IHGNLTSSNVLLD-DSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKS 487 (580)
Q Consensus 410 ~H~Dlk~~Nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~ 487 (580)
+||||||+||+++ +++.+||+|||+++....... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 9999999999997 688999999999986644332 2235689999999988764 58999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHhhhhccccc-------cc--------hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 008031 488 PGEPLNGAELPQWVASIVKEEWTNEV-------FD--------LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQ 552 (580)
Q Consensus 488 p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~e 552 (580)
||.+.+..+....+...........+ .+ .......+. .....+.+++.+||+.||++|||+.|
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPE--GTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCT--TCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCC--CCCHHHHHHHHHHccCChhhCCCHHH
Confidence 99876544333332221111000000 00 000000000 11235678999999999999999999
Q ss_pred HHHH
Q 008031 553 VVQQ 556 (580)
Q Consensus 553 v~~~ 556 (580)
+++|
T Consensus 319 ~l~h 322 (383)
T 3eb0_A 319 AMAH 322 (383)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 9975
No 219
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=332.71 Aligned_cols=260 Identities=19% Similarity=0.292 Sum_probs=194.8
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEeeC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDYM 366 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 366 (580)
|.+.+.||+|+||.||+|.+.+ .||+|+++.... ...+.+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~iv~e~~ 111 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-PPHLAIITSLC 111 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-SSCEEEECBCC
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCceEEEeecc
Confidence 5567999999999999998863 499999865432 233567889999999999999999999987 56899999999
Q ss_pred CCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc----
Q 008031 367 PHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA---- 442 (580)
Q Consensus 367 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 442 (580)
++++|.+++... ...+++..+..++.||+.||+|||+. |++||||||+||+++ ++.+||+|||+++......
T Consensus 112 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~ 187 (319)
T 2y4i_B 112 KGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187 (319)
T ss_dssp CSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred cCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence 999999999764 34689999999999999999999995 999999999999998 5789999999987553211
Q ss_pred ccceeeecCccccCCcccccc---------CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccc
Q 008031 443 NVNVIATAGALGYRAPELSKL---------KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV 513 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (580)
........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+... .+.... ....
T Consensus 188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~-~~~~ 263 (319)
T 2y4i_B 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW---QMGTGM-KPNL 263 (319)
T ss_dssp CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH---HHHTTC-CCCC
T ss_pred ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HhccCC-CCCC
Confidence 112223458899999998764 457889999999999999999999997654332222 211111 1110
Q ss_pred cchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhccccccccC
Q 008031 514 FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAATAAT 569 (580)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~~~~ 569 (580)
.. ...+ .++.+++.+||+.||++|||+.++++.|+++..+......
T Consensus 264 ~~----~~~~------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~ 309 (319)
T 2y4i_B 264 SQ----IGMG------KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309 (319)
T ss_dssp CC----SSCC------TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---------
T ss_pred Cc----CCCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCC
Confidence 00 0111 2566888999999999999999999999999877655443
No 220
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1e-40 Score=341.47 Aligned_cols=252 Identities=12% Similarity=0.089 Sum_probs=177.4
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHH---HHHhcCCCCcceeee-------eEEEC
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEV---SLLGKIRHPNLLALR-------AYYLG 354 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~niv~~~-------~~~~~ 354 (580)
|...+.||+|+||.||+|.+. +|+.||||+++.... ...+.+.+|+ ..++. +||||++++ +++..
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEE
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheec
Confidence 456789999999999999976 789999999976543 2344577785 45555 799987754 44432
Q ss_pred CC----------------CcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCCcccC
Q 008031 355 PK----------------GEKLLVFDYMPHGSLATFLHARGPETPIDWPTR------MKIIKGMTRGLLHLHSNENIIHG 412 (580)
Q Consensus 355 ~~----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~~i~H~ 412 (580)
.. ...++||||++ |+|.+++...+ ..+.+..+ ..++.||+.||+|||+. ||+||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~ivHr 218 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHG 218 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-TEEET
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC-CCccC
Confidence 11 23799999998 89999998642 12444555 68889999999999994 99999
Q ss_pred CCCCCCeeeCCCCCeEEeecccccccccccccceeeecCccccCCcccccc--CCCCCcccchhHHHHHHHHHcCCCCCC
Q 008031 413 NLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKL--KKANTKTDVYSLGVTILELLTGKSPGE 490 (580)
Q Consensus 413 Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~ 490 (580)
||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999998654322 13457799999999987 789999999999999999999999998
Q ss_pred CCCCCChhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 491 PLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.........+............ ... ...+.. ...+.+++.+||+.||++|||+.|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 295 LVTPGIKGSWKRPSLRVPGTDS---LAF-GSCTPL---PDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp BCCTTCTTCCCBCCTTSCCCCS---CCC-TTSSCC---CHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CcCcccccchhhhhhhhccccc---cch-hhccCC---CHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 7643321111000000000000 000 001122 2356678889999999999999999874
No 221
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=9.5e-40 Score=333.25 Aligned_cols=263 Identities=24% Similarity=0.294 Sum_probs=192.2
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccc-----------cHHHHHHHHHHHhcCCCCcceeeeeEEECC--
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITK-----------GQREFESEVSLLGKIRHPNLLALRAYYLGP-- 355 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-- 355 (580)
|.+.+.||+|+||.||+|.+.+|+.||||++...... ..+.+.+|++++++++||||+++++++...
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 103 (362)
T 3pg1_A 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEE 103 (362)
T ss_dssp CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCT
T ss_pred eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccC
Confidence 5567899999999999999988999999998643321 126789999999999999999999998642
Q ss_pred --CCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecc
Q 008031 356 --KGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFG 433 (580)
Q Consensus 356 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg 433 (580)
....++||||++ |+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 104 ~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 104 PAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp TTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred CCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEEcCCCCEEEEecC
Confidence 235799999997 6888888754 34689999999999999999999995 99999999999999999999999999
Q ss_pred cccccccccccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc
Q 008031 434 LSRLMTAAANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE 512 (580)
Q Consensus 434 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (580)
++........ .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+....+...........
T Consensus 180 ~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 257 (362)
T 3pg1_A 180 LAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257 (362)
T ss_dssp C-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred cccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHH
Confidence 9975443322 233568899999998876 6789999999999999999999999987654333333222111100000
Q ss_pred -----------ccchhhhccCCCc-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 513 -----------VFDLELMRDAPTI-----GDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 513 -----------~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
............. ......+.+++.+||+.||++|||+.|+++|-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 318 (362)
T 3pg1_A 258 VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318 (362)
T ss_dssp HHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred hhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCc
Confidence 0000000000000 01123567899999999999999999999863
No 222
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-40 Score=329.14 Aligned_cols=250 Identities=23% Similarity=0.377 Sum_probs=192.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCcceeeeeEEECC-----CCcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPNLLALRAYYLGP-----KGEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-----~~~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++.... .....+.+|+.+++++ +||||+++++++... .+..++
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 556799999999999999985 78999999986432 3456789999999999 899999999999763 357899
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp EEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred EEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 999999999999998642 34689999999999999999999995 9999999999999999999999999998865432
Q ss_pred cccceeeecCccccCCccccc-----cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccch
Q 008031 442 ANVNVIATAGALGYRAPELSK-----LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL 516 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
.. ......|++.|+|||++. +..++.++|||||||++|+|++|+.||......+. ...+...... ..
T Consensus 183 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~-~~--- 254 (326)
T 2x7f_A 183 VG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA---LFLIPRNPAP-RL--- 254 (326)
T ss_dssp ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCC-CC---
T ss_pred cc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH---HHHhhcCccc-cC---
Confidence 22 222346899999999986 56788999999999999999999999976543221 1111111110 00
Q ss_pred hhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 517 ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 517 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..... ...+.+++.+||+.||++|||+.+++++
T Consensus 255 ----~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 255 ----KSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ----SCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ----Ccccc---CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01111 1356688889999999999999999985
No 223
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.6e-39 Score=320.45 Aligned_cols=249 Identities=27% Similarity=0.354 Sum_probs=199.2
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
.|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.. .+..++|||
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 101 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVGE 101 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-CCeEEEEEE
Confidence 4677899999999999999986 789999999865432 345678999999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC---CCeEEeecccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS---TNAKISDFGLSRLMTAA 441 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~---~~~kl~Dfg~~~~~~~~ 441 (580)
|+++++|.+++.... .+++..+..++.||+.||+|||+. |++||||||+||+++.+ +.+||+|||++......
T Consensus 102 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 102 LYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred ccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 999999999987643 589999999999999999999995 99999999999999754 46999999998866443
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
.. .....+++.|+|||.+.+ .++.++||||+|+++|+|++|+.||...+..+. ...+..+.... +...
T Consensus 178 ~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~---~~~~--- 245 (287)
T 2wei_A 178 TK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI---LKRVETGKYAF---DLPQ--- 245 (287)
T ss_dssp SS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHCCCCC---CSGG---
T ss_pred Cc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHcCCCCC---Cchh---
Confidence 22 123457889999998875 489999999999999999999999976543322 22222221110 0000
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
.... ..++.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~---~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 WRTI---SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhhc---CHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0111 2356788889999999999999999985
No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.2e-39 Score=327.56 Aligned_cols=261 Identities=25% Similarity=0.350 Sum_probs=198.9
Q ss_pred HHhhhccccccCceEEEEEEeC--CCCEEEEEEccccccc--cHHHHHHHHHHHhcC---CCCcceeeeeEEEC----CC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE--DGSQVAVKRLREKITK--GQREFESEVSLLGKI---RHPNLLALRAYYLG----PK 356 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~~~~~~~~----~~ 356 (580)
.|.+.+.||+|+||.||+|.+. +|+.||+|+++..... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 3667899999999999999983 6889999998654322 234566788777766 89999999999872 24
Q ss_pred CcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 357 GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 357 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
...++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred ceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 56899999997 69999998753 33589999999999999999999995 99999999999999999999999999998
Q ss_pred ccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhh----hcccc
Q 008031 437 LMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE----EWTNE 512 (580)
Q Consensus 437 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~----~~~~~ 512 (580)
...... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||......+....+...... .+...
T Consensus 169 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (326)
T 1blx_A 169 IYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246 (326)
T ss_dssp CCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred cccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccc
Confidence 665332 223456899999999999999999999999999999999999999876543333322221110 01000
Q ss_pred ccc----------hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 513 VFD----------LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 513 ~~~----------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
... .......+.. ...+.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 247 VALPRQAFHSKSAQPIEKFVTDI---DELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CSSCGGGSCCCCCCCGGGTCCSC---CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccchhhhcccCcchhhhccccC---CHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 0000011112 2356678889999999999999999976
No 225
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.7e-39 Score=320.80 Aligned_cols=251 Identities=24% Similarity=0.344 Sum_probs=183.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc-c-HHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK-G-QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|...+.||+|+||.||+|.+. +|+.||+|+++..... . .+.+.++...++.++||||+++++++.. .+..++||||
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~e~ 87 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICMEL 87 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSSEEEEEEC
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-cCCEEEEEeh
Confidence 566789999999999999985 7899999998754322 2 2334555566888899999999999987 6689999999
Q ss_pred CCCCChhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCC-CcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 366 MPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSNE-NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 366 ~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
++ |+|.+++... .....+++..+..++.|++.||+|||+ . |++||||||+||+++.++.+||+|||++........
T Consensus 88 ~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 88 MD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp CS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-HSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred hc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh-cCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 97 5888877542 223569999999999999999999998 5 999999999999999999999999999986644322
Q ss_pred cceeeecCccccCCcccc----ccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 444 VNVIATAGALGYRAPELS----KLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 444 ~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
. ....||+.|+|||.+ .+..++.++||||+|+++|+|++|+.||..... ....+...........
T Consensus 166 ~--~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~------- 234 (290)
T 3fme_A 166 K--DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--PFQQLKQVVEEPSPQL------- 234 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC--HHHHHHHHHHSCCCCC-------
T ss_pred c--cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc--hHHHHHHHhccCCCCc-------
Confidence 2 234689999999995 566788999999999999999999999975432 2222222222211110
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.... ...++.+++.+||+.||++|||+.|++++-
T Consensus 235 -~~~~---~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp 268 (290)
T 3fme_A 235 -PADK---FSAEFVDFTSQCLKKNSKERPTYPELMQHP 268 (290)
T ss_dssp -CTTT---SCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred -cccc---CCHHHHHHHHHHhhcChhhCcCHHHHHhCc
Confidence 0011 123567888899999999999999999853
No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.5e-39 Score=328.51 Aligned_cols=259 Identities=19% Similarity=0.274 Sum_probs=201.0
Q ss_pred HhhhccccccCceEEEEEEe-C-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCC------cceeeeeEEECCCCcEE
Q 008031 289 CATAEIMGKSTYGTVYKATL-E-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHP------NLLALRAYYLGPKGEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~~~~~~~ 360 (580)
|.+.+.||+|+||.||+|.+ . +++.||||+++... ...+.+.+|+++++.++|+ +++++++++.. .+..+
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~~~~ 93 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HGHIC 93 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TTEEE
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CCcEE
Confidence 56789999999999999987 3 68899999986432 3345688899999888665 49999999986 66899
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC-----------------
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD----------------- 423 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~----------------- 423 (580)
+||||+ +++|.+++...+ ...+++..+..++.||+.||+|||+. ||+||||||+||+++.
T Consensus 94 lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 999999 889999998753 34689999999999999999999995 9999999999999987
Q ss_pred --CCCeEEeecccccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHH
Q 008031 424 --STNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501 (580)
Q Consensus 424 --~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~ 501 (580)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred ccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 6689999999997644322 2346899999999999999999999999999999999999999876544433333
Q ss_pred HHHhhhhcc--------ccccc--------------------hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 008031 502 ASIVKEEWT--------NEVFD--------------------LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQV 553 (580)
Q Consensus 502 ~~~~~~~~~--------~~~~~--------------------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev 553 (580)
......... ...+. ...............++.+++.+||+.||++|||+.|+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 322211000 00000 00000011122345678899999999999999999999
Q ss_pred HHH
Q 008031 554 VQQ 556 (580)
Q Consensus 554 ~~~ 556 (580)
+++
T Consensus 327 l~h 329 (339)
T 1z57_A 327 LKH 329 (339)
T ss_dssp TTS
T ss_pred hcC
Confidence 976
No 227
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=326.62 Aligned_cols=263 Identities=20% Similarity=0.262 Sum_probs=191.0
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEEC-------------
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLG------------- 354 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------------- 354 (580)
|...+.||+|+||.||+|.+. +|+.||+|++........+.+.+|++++++++||||+++++++..
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 566789999999999999987 589999999876555556778999999999999999999998843
Q ss_pred CCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC-CCCCeEEeecc
Q 008031 355 PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD-DSTNAKISDFG 433 (580)
Q Consensus 355 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~-~~~~~kl~Dfg 433 (580)
.....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||+++ +++.+||+|||
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred ccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 2356799999997 699999865 3589999999999999999999994 999999999999997 56789999999
Q ss_pred ccccccccccc--ceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhh---
Q 008031 434 LSRLMTAAANV--NVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE--- 507 (580)
Q Consensus 434 ~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 507 (580)
+++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+..+.+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCH
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCch
Confidence 99876432211 1223457889999998765 67899999999999999999999999876543322222111000
Q ss_pred hcccc-------ccchhhhccCCCc----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 508 EWTNE-------VFDLELMRDAPTI----GDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 508 ~~~~~-------~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
..... ............. .....++.+++.+||+.||++|||+.|++++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (320)
T 2i6l_A 247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP 307 (320)
T ss_dssp HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSH
T ss_pred hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCc
Confidence 00000 0000000000000 01123577889999999999999999999863
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-39 Score=329.85 Aligned_cols=260 Identities=20% Similarity=0.280 Sum_probs=196.7
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECC----CCcEEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGP----KGEKLLV 362 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~~lv 362 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++..... .....+.+|++++++++||||+++++++... ....++|
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence 456789999999999999986 789999999864332 2345688999999999999999999988653 2578999
Q ss_pred EeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 363 FDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 363 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
|||+. |+|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 93 QELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp ECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 99996 6999998763 589999999999999999999995 99999999999999999999999999998664322
Q ss_pred cc---------ceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc
Q 008031 443 NV---------NVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE 512 (580)
Q Consensus 443 ~~---------~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (580)
.. ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..+....+...........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTT
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhc
Confidence 11 1223468999999998654 7789999999999999999999999987653322222222111100000
Q ss_pred ----ccc---------------hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 513 ----VFD---------------LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 513 ----~~~---------------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
... .......+.. ..++.+++.+||+.||++|||+.|++++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRV---NPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp TTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTS---CHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred cccccccchhhHHhhcccCCCCcchhhhcccC---CHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 000 0000001111 23567888999999999999999999864
No 229
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3e-39 Score=331.76 Aligned_cols=260 Identities=23% Similarity=0.276 Sum_probs=198.8
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCC-CC-----cceeeeeEEECCCCcEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIR-HP-----NLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +++.||||+++... .....+..|+.+++.++ |+ +|+++++++.. .+..++
T Consensus 56 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~l 133 (382)
T 2vx3_A 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCL 133 (382)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTEEEE
T ss_pred EEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCceEE
Confidence 567789999999999999986 68899999987432 23456778888888874 55 49999999986 568999
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccCCCCCCCeeeC--CCCCeEEeeccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN-ENIIHGNLTSSNVLLD--DSTNAKISDFGLSRLM 438 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~~i~H~Dlk~~Nil~~--~~~~~kl~Dfg~~~~~ 438 (580)
||||++ |+|.+++.... ...+++..+..++.|++.||.|||++ .||+||||||+|||++ .++.+||+|||+++..
T Consensus 134 v~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 134 VFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp EEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 999995 59999998753 23589999999999999999999952 5999999999999995 4778999999999876
Q ss_pred ccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhc---------
Q 008031 439 TAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW--------- 509 (580)
Q Consensus 439 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--------- 509 (580)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+....+........
T Consensus 212 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 287 (382)
T 2vx3_A 212 GQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK 287 (382)
T ss_dssp TCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTT
T ss_pred ccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHH
Confidence 432 2235689999999999999999999999999999999999999987654443333322111000
Q ss_pred ----cccccchh-----------------------------------hhccCCCcHHHHHHHHHHHhhccCCCCCCCCCH
Q 008031 510 ----TNEVFDLE-----------------------------------LMRDAPTIGDELLNTLKLALHCVDPSPSARPEV 550 (580)
Q Consensus 510 ----~~~~~~~~-----------------------------------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~ 550 (580)
.....+.. ..........+..++.+++.+||+.||++|||+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta 367 (382)
T 2vx3_A 288 ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQP 367 (382)
T ss_dssp HHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCH
T ss_pred HHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCH
Confidence 00000000 000001122344578899999999999999999
Q ss_pred HHHHHH
Q 008031 551 LQVVQQ 556 (580)
Q Consensus 551 ~ev~~~ 556 (580)
.|+++|
T Consensus 368 ~e~L~h 373 (382)
T 2vx3_A 368 YYALQH 373 (382)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999876
No 230
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.8e-39 Score=328.19 Aligned_cols=252 Identities=24% Similarity=0.369 Sum_probs=195.0
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHH-HhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSL-LGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|...+.||+|+||.||+|.+. +|+.||||+++.... .....+..|..+ ++.++||||+++++++.. .+..++||||
T Consensus 53 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~e~ 131 (340)
T 3an0_A 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICMEL 131 (340)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-SSCEEEEECC
T ss_pred eeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-CCcEEEEHHH
Confidence 456788999999999999975 789999999875433 233455566665 778899999999999987 5689999999
Q ss_pred CCCCChhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 366 MPHGSLATFLHAR-GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 366 ~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+++ +|.+++... .....+++..+..++.||+.||+|||+..||+||||||+||+++.++.+||+|||++........
T Consensus 132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 209 (340)
T 3an0_A 132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA- 209 (340)
T ss_dssp CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHH-
T ss_pred hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccccc-
Confidence 975 999988642 12357999999999999999999999723999999999999999999999999999976543221
Q ss_pred ceeeecCccccCCccccc----cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhc
Q 008031 445 NVIATAGALGYRAPELSK----LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMR 520 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ....+...........
T Consensus 210 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~-------- 278 (340)
T 3an0_A 210 -KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--PFQQLKQVVEEPSPQL-------- 278 (340)
T ss_dssp -HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC--HHHHHHHHHHSCCCCC--------
T ss_pred -cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc--hHHHHHHHhcCCCCCC--------
Confidence 12246899999999864 44788999999999999999999999976432 2222222222211100
Q ss_pred cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 521 DAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 521 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.......++.+++.+||+.||++|||+.|++++-
T Consensus 279 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 312 (340)
T 3an0_A 279 ---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHP 312 (340)
T ss_dssp ---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred ---CcccCCHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 0001123677889999999999999999999853
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.8e-39 Score=332.02 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=193.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCC-----cEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKG-----EKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----~~~ 360 (580)
|...+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|+.+++.++||||+++++++..... ..+
T Consensus 44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 566789999999999999976 7899999998754322 24578899999999999999999999976332 239
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+||||+. ++|.+++.. .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 124 lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred EEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 9999996 688887743 489999999999999999999995 999999999999999999999999999976543
Q ss_pred ccccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhh---hccccccch
Q 008031 441 AANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE---EWTNEVFDL 516 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 516 (580)
. .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...+..+....+...... .......+.
T Consensus 197 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (371)
T 4exu_A 197 E----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 272 (371)
T ss_dssp -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred C----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhh
Confidence 2 233568999999999876 78899999999999999999999999875543333322221110 000000000
Q ss_pred -------hhhccCCCc-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 517 -------ELMRDAPTI-----GDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 517 -------~~~~~~~~~-----~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
......... ......+.+++.+||+.||++|||+.|++++=
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 325 (371)
T 4exu_A 273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 325 (371)
T ss_dssp HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCc
Confidence 000000000 01124677889999999999999999999873
No 232
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.5e-39 Score=331.48 Aligned_cols=264 Identities=20% Similarity=0.256 Sum_probs=185.5
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECCCC------cEEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGPKG------EKLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~~l 361 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++.... .....+.+|++.++.++||||+++++++..... ..++
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~l 103 (360)
T 3e3p_A 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV 103 (360)
T ss_dssp EEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEE
Confidence 667889999999999999986 78999999885432 223456778888899999999999999965221 2789
Q ss_pred EEeeCCCCChhhhhhh-cCCCCCCCHHHHHHHHHHHHHHHHHhh--cCCCcccCCCCCCCeeeCC-CCCeEEeecccccc
Q 008031 362 VFDYMPHGSLATFLHA-RGPETPIDWPTRMKIIKGMTRGLLHLH--SNENIIHGNLTSSNVLLDD-STNAKISDFGLSRL 437 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~LH--~~~~i~H~Dlk~~Nil~~~-~~~~kl~Dfg~~~~ 437 (580)
||||+++ +|.+.+.. ......+++..+..++.|++.||.||| + .||+||||||+||+++. ++.+||+|||+++.
T Consensus 104 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 104 VMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp EEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT-TCCBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred Eeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC-CCeecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 9999976 55544432 223456889999999999999999999 8 59999999999999996 89999999999987
Q ss_pred cccccccceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhc-------
Q 008031 438 MTAAANVNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEW------- 509 (580)
Q Consensus 438 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 509 (580)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+..+....+........
T Consensus 182 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 182 LSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp CCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhc
Confidence 654332 2235689999999988654 489999999999999999999999987654433333322111000
Q ss_pred cccccchhhhccC---------CCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 510 TNEVFDLELMRDA---------PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 510 ~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.....+....... ........++.+++.+||+.||++|||+.|+++|-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 0000000000000 00011235677899999999999999999999873
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.9e-39 Score=317.88 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=189.1
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECC-----------
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGP----------- 355 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----------- 355 (580)
.|...+.||+|+||.||+|... +|+.||||++... ....+.+.+|+.++++++||||+++++++.+.
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 4667899999999999999975 7999999998643 23346788999999999999999999988642
Q ss_pred -CCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccc
Q 008031 356 -KGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGL 434 (580)
Q Consensus 356 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~ 434 (580)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 346789999999999999998642 4578889999999999999999995 999999999999999999999999999
Q ss_pred cccccccc-------------ccceeeecCccccCCccccccC-CCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHH
Q 008031 435 SRLMTAAA-------------NVNVIATAGALGYRAPELSKLK-KANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQW 500 (580)
Q Consensus 435 ~~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~ 500 (580)
+....... ........|+..|+|||.+.+. .++.++||||+||++|+|++ ||.... +....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~~~~~ 237 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--ERVNI 237 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--hHHHH
Confidence 97654321 1122345688999999998754 78999999999999999998 543211 11111
Q ss_pred HHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 501 VASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
...+.... ....+. ........+.+++.+||+.||.+|||+.+++++-
T Consensus 238 ~~~~~~~~---~~~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 238 LKKLRSVS---IEFPPD------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp HHHHHSTT---CCCCTT------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred HHhccccc---cccCcc------ccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 11111110 000111 1111223567889999999999999999999863
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=328.00 Aligned_cols=258 Identities=22% Similarity=0.307 Sum_probs=193.6
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc--cHHHHHHHHHHHhcCCCCcceeeeeEEECCCC-----cEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK--GQREFESEVSLLGKIRHPNLLALRAYYLGPKG-----EKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----~~~ 360 (580)
|...+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|+.++++++||||+++++++..... ..+
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 556789999999999999986 7899999998654322 24568899999999999999999999976332 359
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTA 440 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 440 (580)
+||||++ ++|.+++.. .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 106 lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp EEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred EEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 9999996 688888753 489999999999999999999995 999999999999999999999999999976543
Q ss_pred ccccceeeecCccccCCcccccc-CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhh---hccccccch
Q 008031 441 AANVNVIATAGALGYRAPELSKL-KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKE---EWTNEVFDL 516 (580)
Q Consensus 441 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 516 (580)
. .....+|+.|+|||.+.+ ..++.++||||+||++|+|++|+.||...+..+....+...... .......+.
T Consensus 179 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 254 (353)
T 3coi_A 179 E----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 254 (353)
T ss_dssp ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred C----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence 2 223568999999998876 67899999999999999999999999875543322222211100 000000000
Q ss_pred -----------hhhccC-CCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 517 -----------ELMRDA-PTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 517 -----------~~~~~~-~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
...... ........++.+++.+||+.||++|||+.|++++-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 000000 00111234667888999999999999999999873
No 235
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3e-39 Score=328.55 Aligned_cols=269 Identities=20% Similarity=0.293 Sum_probs=203.0
Q ss_pred HhhhccccccCceEEEEEEeC-CC-CEEEEEEccccccccHHHHHHHHHHHhcCCCCc------ceeeeeEEECCCCcEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DG-SQVAVKRLREKITKGQREFESEVSLLGKIRHPN------LLALRAYYLGPKGEKL 360 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~~~~ 360 (580)
|.+.+.||+|+||.||+|.+. ++ +.||+|+++.. ......+.+|+.++++++|++ ++.+++++.. .+..+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 98 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HGHMC 98 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TTEEE
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CCeEE
Confidence 667899999999999999975 44 68999998643 233466888999999987665 8999998876 66899
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeee-------------------
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLL------------------- 421 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~------------------- 421 (580)
+||||+ ++++.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecccccccccccccccccc
Confidence 999999 678888776643 34689999999999999999999994 99999999999999
Q ss_pred CCCCCeEEeecccccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHH
Q 008031 422 DDSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWV 501 (580)
Q Consensus 422 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~ 501 (580)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 567889999999997644322 2356899999999999999999999999999999999999999876544433333
Q ss_pred HHHhhhhcc--------cccc-c-------------------hhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 008031 502 ASIVKEEWT--------NEVF-D-------------------LELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQV 553 (580)
Q Consensus 502 ~~~~~~~~~--------~~~~-~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev 553 (580)
......... .... . ...............++.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 322211000 0000 0 00000011122334578899999999999999999999
Q ss_pred HHH--Hhhhcccccc
Q 008031 554 VQQ--LEEIRPEAAT 566 (580)
Q Consensus 554 ~~~--L~~~~~~~~~ 566 (580)
+++ +.++.++...
T Consensus 332 l~hp~f~~~~~~~~~ 346 (355)
T 2eu9_A 332 LLHPFFAGLTPEERS 346 (355)
T ss_dssp TTSGGGGGCCHHHHC
T ss_pred hcChhhcCCChhhcc
Confidence 976 4444444333
No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.2e-39 Score=329.90 Aligned_cols=262 Identities=22% Similarity=0.267 Sum_probs=197.3
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCC-----------CCcceeeeeEEECC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIR-----------HPNLLALRAYYLGP 355 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~~ 355 (580)
.|.+.+.||+|+||.||+|.+. +++.||||++.... .....+.+|+.++++++ |+||+++++++...
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 3667899999999999999975 78999999987432 23456888999999886 89999999998752
Q ss_pred C---CcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-CcccCCCCCCCeeeC------CCC
Q 008031 356 K---GEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE-NIIHGNLTSSNVLLD------DST 425 (580)
Q Consensus 356 ~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-~i~H~Dlk~~Nil~~------~~~ 425 (580)
. ...++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+ + ||+||||||+|||++ ..+
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~-~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHH-TTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHh-cCCEEecCCChHHeEEeccCCCcCcc
Confidence 2 2678999999 889999998743 3358999999999999999999999 5 999999999999994 444
Q ss_pred CeEEeecccccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCCh---hHHHH
Q 008031 426 NAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAEL---PQWVA 502 (580)
Q Consensus 426 ~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~---~~~~~ 502 (580)
.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.
T Consensus 176 ~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp EEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred eEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 79999999998664332 234689999999999999999999999999999999999999986543221 11111
Q ss_pred HHhhh--hccc----------ccc-----------------chhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 008031 503 SIVKE--EWTN----------EVF-----------------DLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQV 553 (580)
Q Consensus 503 ~~~~~--~~~~----------~~~-----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev 553 (580)
.+... .... ..+ ................++.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 11110 0000 000 000111122334556778899999999999999999999
Q ss_pred HHHH
Q 008031 554 VQQL 557 (580)
Q Consensus 554 ~~~L 557 (580)
+++-
T Consensus 332 l~hp 335 (373)
T 1q8y_A 332 VNHP 335 (373)
T ss_dssp HTCG
T ss_pred hhCh
Confidence 9864
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.2e-39 Score=325.52 Aligned_cols=250 Identities=21% Similarity=0.307 Sum_probs=168.3
Q ss_pred hccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcceeeeeEEECC---CCcEEEEEeeCC
Q 008031 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNLLALRAYYLGP---KGEKLLVFDYMP 367 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---~~~~~lv~e~~~ 367 (580)
.+.||+|+||.||+|.+. +|+.||||++... .....+....++.++||||+++++++... ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 357999999999999987 7999999998543 22222333445667999999999998652 334789999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC---CCCeEEeeccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD---STNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+|+|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||++.......
T Consensus 110 gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~-- 185 (336)
T 3fhr_A 110 GGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA-- 185 (336)
T ss_dssp TEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------
T ss_pred CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEEecCCCceEEEeccccceeccccc--
Confidence 999999998753 34699999999999999999999994 9999999999999986 4559999999997654322
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
.....+|+.|+|||++.+..++.++||||+|+++|+|++|+.||...................... . ..+.
T Consensus 186 -~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~------~~~~ 256 (336)
T 3fhr_A 186 -LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG--F------PNPE 256 (336)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------C--C------CTTT
T ss_pred -cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccc--c------Cchh
Confidence 223467999999999988899999999999999999999999997665443322111111110000 0 0000
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
......++.+++.+||+.||++|||+.|++++-.
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 1112235678888999999999999999999654
No 238
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-38 Score=317.58 Aligned_cols=251 Identities=20% Similarity=0.304 Sum_probs=192.3
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--ccHHHHHHHHHHHhcCC--CCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--KGQREFESEVSLLGKIR--HPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+.+++.||||++..... .....+.+|++++++++ |+||+++++++.. ++..++|||
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~e 108 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVME 108 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred EEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-CCEEEEEEe
Confidence 566789999999999999998899999999864432 23467899999999996 5999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+.+++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||++++ +.+||+|||++.........
T Consensus 109 -~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 109 -CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp -CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred -cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 5588999999875 3689999999999999999999995 9999999999999965 78999999999876443221
Q ss_pred -ceeeecCccccCCcccccc-----------CCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhcccc
Q 008031 445 -NVIATAGALGYRAPELSKL-----------KKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNE 512 (580)
Q Consensus 445 -~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (580)
......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ....+..........
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~- 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISKLHAIIDPNHEI- 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHHCTTSCC-
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH--HHHHHHHHHhccccc-
Confidence 2234468999999999865 4788899999999999999999999975432 122222222211110
Q ss_pred ccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 008031 513 VFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEE 559 (580)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~ 559 (580)
.. .... ..++.+++.+||+.||++|||+.|++++-.-
T Consensus 260 ----~~---~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h~~~ 296 (313)
T 3cek_A 260 ----EF---PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296 (313)
T ss_dssp ----CC---CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred ----CC---cccc---hHHHHHHHHHHccCCcccCcCHHHHhcCccc
Confidence 00 1111 1356788889999999999999999987543
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.3e-39 Score=324.43 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=174.8
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHH-HHhcCCCCcceeeeeEEECCCCcEEEEEee
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVS-LLGKIRHPNLLALRAYYLGPKGEKLLVFDY 365 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 365 (580)
|...+.||+|+||.||+|.+. +|+.||||+++.... .....+..|+. +++.++||||+++++++.. .+..++||||
T Consensus 24 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-~~~~~lv~e~ 102 (327)
T 3aln_A 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICMEL 102 (327)
T ss_dssp EEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred hhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-CCceEEEEee
Confidence 556789999999999999986 789999999875432 23345556666 7777899999999999987 5689999999
Q ss_pred CCCCChhhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCC-CcccCCCCCCCeeeCCCCCeEEeeccccccccccc
Q 008031 366 MPHGSLATFLHAR--GPETPIDWPTRMKIIKGMTRGLLHLHSNE-NIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 366 ~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 442 (580)
+++ +|.+++... .....+++..+..++.|++.||.|||+ . |++||||||+||+++.++.+||+|||+++......
T Consensus 103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 180 (327)
T 3aln_A 103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180 (327)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH-HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc-cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence 975 888877631 123568999999999999999999998 5 99999999999999999999999999998664332
Q ss_pred ccceeeecCccccCCcccc----ccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhh
Q 008031 443 NVNVIATAGALGYRAPELS----KLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLEL 518 (580)
Q Consensus 443 ~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
. .....||+.|+|||.+ .+..++.++||||||+++|+|++|+.||...... ...+......... . ....
T Consensus 181 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~-~-~~~~- 253 (327)
T 3aln_A 181 A--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV--FDQLTQVVKGDPP-Q-LSNS- 253 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCSCCC-C-CCCC-
T ss_pred c--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH--HHHHHHHhcCCCC-C-CCCc-
Confidence 2 2234689999999998 5667899999999999999999999999764321 1111111111100 0 0000
Q ss_pred hccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 519 MRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 519 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
.... ....+.+++.+||+.||++|||+.+++++-
T Consensus 254 --~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~hp 287 (327)
T 3aln_A 254 --EERE---FSPSFINFVNLCLTKDESKRPKYKELLKHP 287 (327)
T ss_dssp --SSCC---CCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred --cccc---CCHHHHHHHHHHhhCChhhCcCHHHHHhCh
Confidence 0011 123567888899999999999999998864
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.8e-39 Score=337.09 Aligned_cols=249 Identities=24% Similarity=0.368 Sum_probs=183.6
Q ss_pred hhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 291 TAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 291 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
..+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.. ++..++||||++ |
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~lv~E~~~-g 93 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETT-DRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECCCS-E
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEec-CCeEEEEEecCC-C
Confidence 35789999999998776678999999998643 235678899999886 89999999999986 668999999995 6
Q ss_pred ChhhhhhhcCCCCC----CCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCC-------------CCeEEeec
Q 008031 370 SLATFLHARGPETP----IDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDS-------------TNAKISDF 432 (580)
Q Consensus 370 ~L~~~l~~~~~~~~----~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~-------------~~~kl~Df 432 (580)
+|.+++........ .++..++.++.||+.||+|||+. ||+||||||+|||++.+ +.+||+||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99999986532111 12334678999999999999994 99999999999999754 47999999
Q ss_pred cccccccccccc---ceeeecCccccCCcccccc-------CCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHH
Q 008031 433 GLSRLMTAAANV---NVIATAGALGYRAPELSKL-------KKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWV 501 (580)
Q Consensus 433 g~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~ 501 (580)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......+
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----- 247 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE----- 247 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-----
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-----
Confidence 999876543221 1224579999999999865 678999999999999999999 999997543221
Q ss_pred HHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 502 ASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
..+........ .. ..........++.+++.+||+.||++|||+.|+++|
T Consensus 248 ~~i~~~~~~~~-----~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 SNIIRGIFSLD-----EM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HHHHHTCCCCC-----CC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHhcCCCCcc-----cc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 11111111100 00 011122344677889999999999999999999874
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=9.2e-40 Score=327.28 Aligned_cols=239 Identities=20% Similarity=0.371 Sum_probs=193.3
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc------cHHHHHHHHHHHhcCC--CCcceeeeeEEECCCCcE
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK------GQREFESEVSLLGKIR--HPNLLALRAYYLGPKGEK 359 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~ 359 (580)
|.+.+.||+|+||.||+|.+. +++.||||.+...... ....+.+|+.++++++ |+||+++++++.. .+..
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~-~~~~ 123 (320)
T 3a99_A 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-PDSF 123 (320)
T ss_dssp EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-SSEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec-CCcE
Confidence 566799999999999999875 7889999998654322 2245678999999996 5999999999987 5689
Q ss_pred EEEEeeCCC-CChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC-CCCCeEEeecccccc
Q 008031 360 LLVFDYMPH-GSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD-DSTNAKISDFGLSRL 437 (580)
Q Consensus 360 ~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~-~~~~~kl~Dfg~~~~ 437 (580)
++|||++.+ ++|.+++... ..+++..+..++.||+.||+|||+ .||+||||||+||+++ +++.+||+|||++..
T Consensus 124 ~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 124 VLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp EEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH-CCcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 999999986 8999999874 368999999999999999999999 5999999999999999 788999999999987
Q ss_pred cccccccceeeecCccccCCccccccCCC-CCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccch
Q 008031 438 MTAAANVNVIATAGALGYRAPELSKLKKA-NTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDL 516 (580)
Q Consensus 438 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
..... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....... ..
T Consensus 200 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---------~~~~~~~---~~-- 262 (320)
T 3a99_A 200 LKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIRGQV---FF-- 262 (320)
T ss_dssp CCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------HHHHCCC---CC--
T ss_pred ccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---------hhhcccc---cc--
Confidence 65432 223568999999999877665 678999999999999999999996421 1111100 00
Q ss_pred hhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 008031 517 ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQL 557 (580)
Q Consensus 517 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L 557 (580)
....+ .++.+++.+||+.||++|||+.|++++-
T Consensus 263 -----~~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 263 -----RQRVS---SECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp -----SSCCC---HHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred -----cccCC---HHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 01111 2566888899999999999999999863
No 242
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.4e-38 Score=312.94 Aligned_cols=233 Identities=13% Similarity=0.070 Sum_probs=180.9
Q ss_pred HhhhccccccCceEEEEEEeC-CCCEEEEEEcccccccc---HHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 289 CATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKG---QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++....... .+.+.+|+..+++++||||+++++++.. ++..|+|||
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 111 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-RAGGLVVAE 111 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-CCcEEEEEE
Confidence 566789999999999999986 58999999997654322 3678999999999999999999999987 668999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+++++|.++++.. ....++.+++.|++.||+|||+. ||+||||||+||+++.++.+||+++|
T Consensus 112 ~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 112 WIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred ecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 99999999999642 35567889999999999999994 99999999999999999999998543
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
|++ .++.++|||||||++|||++|+.||...+..+............. ..+. ...+.
T Consensus 175 ----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~ 231 (286)
T 3uqc_A 175 ----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP----IEPA--DIDRD 231 (286)
T ss_dssp ----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCB----CCHH--HHCTT
T ss_pred ----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCC----CChh--hcccC
Confidence 333 367899999999999999999999987654332211111111100 0000 00111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhcccccc
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLEEIRPEAAT 566 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~~~~~~~~~ 566 (580)
.+ .++.+++.+||+.||++| |+.|+++.|+++......
T Consensus 232 ~~---~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~ 269 (286)
T 3uqc_A 232 IP---FQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADR 269 (286)
T ss_dssp SC---HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC----
T ss_pred CC---HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCc
Confidence 22 256688889999999999 999999999998765543
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=330.70 Aligned_cols=247 Identities=21% Similarity=0.326 Sum_probs=182.5
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEEEEeeCC
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+ ....++||||+.
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~~~~lv~E~~~ 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKD-RQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEE-TTEEEEEEECCS
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEec-CCEEEEEEECCC
Confidence 456789999999997655556799999999865322 2356899999999 89999999999986 668899999995
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC-----CCCeEEeeccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD-----STNAKISDFGLSRLMTAAA 442 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~-----~~~~kl~Dfg~~~~~~~~~ 442 (580)
|+|.+++.... .......+..++.||+.||+|||+. ||+||||||+||+++. ...+||+|||+++......
T Consensus 102 -g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 102 -ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp -EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred -CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 69999998653 2344456678999999999999994 9999999999999953 2358899999998765332
Q ss_pred c--cceeeecCccccCCccccc---cCCCCCcccchhHHHHHHHHHc-CCCCCCCCCCCChhHHHHHHhhhhccccccch
Q 008031 443 N--VNVIATAGALGYRAPELSK---LKKANTKTDVYSLGVTILELLT-GKSPGEPLNGAELPQWVASIVKEEWTNEVFDL 516 (580)
Q Consensus 443 ~--~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
. .......||+.|+|||++. ...++.++||||+||++|||++ |..||....... ...... .....
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~----~~~~~~-~~~~~---- 248 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ----ANILLG-ACSLD---- 248 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH----HHHHTT-CCCCT----
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH----HHHHhc-cCCcc----
Confidence 1 2233457999999999987 4667889999999999999999 999996543211 111111 10000
Q ss_pred hhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 517 ELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 517 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
...........+.+++.+||+.||++|||+.|+++|
T Consensus 249 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 249 ----CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp ----TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 001111233456789999999999999999999964
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=314.20 Aligned_cols=251 Identities=22% Similarity=0.315 Sum_probs=177.5
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc-c-HHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEEe
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK-G-QREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVFD 364 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 364 (580)
.|...+.||+|+||.||+|.+. +|+.||||++...... . .+.+.++..+++.++||||+++++++.. .+..++|||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e 104 (318)
T 2dyl_A 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIAME 104 (318)
T ss_dssp GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEEEe
Confidence 3566789999999999999986 7999999998654322 2 2334555567888899999999999987 568999999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccccccccccc
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
|+ ++.+..+.... ...+++..+..++.|++.||+|||+..|++||||||+||+++.++.+||+|||++........
T Consensus 105 ~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (318)
T 2dyl_A 105 LM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA- 180 (318)
T ss_dssp CC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred cc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc-
Confidence 99 55565555432 246899999999999999999999822899999999999999999999999999976544322
Q ss_pred ceeeecCccccCCccccc-----cCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhh
Q 008031 445 NVIATAGALGYRAPELSK-----LKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELM 519 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
.....+++.|+|||.+. ...++.++||||||+++|||++|+.||..... ....+..+........
T Consensus 181 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~------- 250 (318)
T 2dyl_A 181 -KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--DFEVLTKVLQEEPPLL------- 250 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHHHSCCCCC-------
T ss_pred -ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--cHHHHHHHhccCCCCC-------
Confidence 22346899999999984 56788999999999999999999999976432 2222233222211100
Q ss_pred ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 520 RDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 520 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
...... ...+.+++.+||+.||.+|||+.+++++
T Consensus 251 ~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 251 PGHMGF---SGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CSSSCC---CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccCCC---CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 000111 2356678889999999999999999885
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-38 Score=341.46 Aligned_cols=272 Identities=24% Similarity=0.323 Sum_probs=202.7
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEEC-----CCCcEE
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLG-----PKGEKL 360 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~~ 360 (580)
.|.+.+.||+|+||.||+|.+. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.. ..+..+
T Consensus 15 rY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~ 94 (676)
T 3qa8_A 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 94 (676)
T ss_dssp --CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred CeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEE
Confidence 3678899999999999999985 789999999875432 334668999999999999999999998754 245679
Q ss_pred EEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCC---eEEeecccccc
Q 008031 361 LVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTN---AKISDFGLSRL 437 (580)
Q Consensus 361 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~---~kl~Dfg~~~~ 437 (580)
+||||+++|+|.+++........+++..+..++.|++.||+|||+ .||+||||||+||+++.++. +||+|||++..
T Consensus 95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs-~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH-TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 999999999999999876555568999999999999999999999 49999999999999997665 99999999987
Q ss_pred cccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccc----
Q 008031 438 MTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV---- 513 (580)
Q Consensus 438 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 513 (580)
...... .....||+.|+|||.+.+..++.++||||+||++|+|++|+.||.+... ..+|.............
T Consensus 174 ~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~--~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 174 LDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ--PVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp TTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH--HHHSSTTCC------CCSCCC
T ss_pred cccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc--hhhhhhhhhcccchhhhhhhh
Confidence 654332 2335789999999999999999999999999999999999999975321 11111111000000000
Q ss_pred ------cchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHhhhcccc
Q 008031 514 ------FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQ-----VVQQLEEIRPEA 564 (580)
Q Consensus 514 ------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~e-----v~~~L~~~~~~~ 564 (580)
+.................+.+++.+||+.||++|||+.| ..+.++.+....
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000000011112223456778999999999999999988 556666655443
No 246
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=319.62 Aligned_cols=241 Identities=24% Similarity=0.412 Sum_probs=190.0
Q ss_pred HHhhhccccccCceEEEEEEeC-CCCEEEEEEccccccc------cHHHHHHHHHHHhcC----CCCcceeeeeEEECCC
Q 008031 288 LCATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKITK------GQREFESEVSLLGKI----RHPNLLALRAYYLGPK 356 (580)
Q Consensus 288 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~~~~~~~~~~ 356 (580)
.|.+.+.||+|+||.||+|.+. +++.||||++...... ....+.+|+.++.++ +|+||+++++++.. .
T Consensus 32 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~-~ 110 (312)
T 2iwi_A 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET-Q 110 (312)
T ss_dssp -CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC----
T ss_pred ceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec-C
Confidence 3677899999999999999875 7899999999654321 223456789999888 89999999999876 5
Q ss_pred CcEEEEEee-CCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeC-CCCCeEEeeccc
Q 008031 357 GEKLLVFDY-MPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLD-DSTNAKISDFGL 434 (580)
Q Consensus 357 ~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~-~~~~~kl~Dfg~ 434 (580)
+..++|||| +.+++|.+++...+ .+++..+..++.||+.||+|||+. ||+||||||+||+++ .++.+||+|||+
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred CeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 678999999 78999999998753 589999999999999999999995 999999999999999 889999999999
Q ss_pred ccccccccccceeeecCccccCCccccccCCCC-CcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccc
Q 008031 435 SRLMTAAANVNVIATAGALGYRAPELSKLKKAN-TKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEV 513 (580)
Q Consensus 435 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (580)
+....... .....|+..|+|||++.+..+. .++||||+|+++|||++|+.||.... .......
T Consensus 187 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------~~~~~~~---- 250 (312)
T 2iwi_A 187 GALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------EILEAEL---- 250 (312)
T ss_dssp CEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------HHHHTCC----
T ss_pred hhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---------HHhhhcc----
Confidence 98765432 2235689999999998776664 48999999999999999999996421 1111100
Q ss_pred cchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 514 FDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
.. .... ...+.+++.+||+.||++|||+.|++++-.
T Consensus 251 ---~~---~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 251 ---HF---PAHV---SPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp ---CC---CTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred ---CC---cccC---CHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00 1111 235668888999999999999999998644
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.8e-38 Score=344.13 Aligned_cols=238 Identities=19% Similarity=0.278 Sum_probs=188.6
Q ss_pred HhhhccccccCceEEEEEEeC--CCCEEEEEEcccccc-ccHHHHHHHHHHHhcCCCCcceeeeeEEECCCCc----EEE
Q 008031 289 CATAEIMGKSTYGTVYKATLE--DGSQVAVKRLREKIT-KGQREFESEVSLLGKIRHPNLLALRAYYLGPKGE----KLL 361 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~----~~l 361 (580)
|.+.+.||+|+||.||+|.+. +|+.||||++..... .....+.+|++++++++||||+++++++...+.. .|+
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~l 161 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYI 161 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEE
Confidence 567799999999999999985 689999999865432 3345688999999999999999999999864322 699
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||+++++|.+++.. .+++.+++.++.||+.||.|||+. ||+||||||+|||++.+ .+||+|||+++.....
T Consensus 162 v~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 162 VMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp EEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred EEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 9999999999987754 589999999999999999999995 99999999999999985 8999999999866443
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhcc
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRD 521 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (580)
....||+.|+|||++.+. ++.++|||||||++|+|++|..||.+........
T Consensus 235 -----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~---------------------- 286 (681)
T 2pzi_A 235 -----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE---------------------- 286 (681)
T ss_dssp -----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT----------------------
T ss_pred -----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccc----------------------
Confidence 235689999999998765 4889999999999999999999886432111100
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHHHhhhc
Q 008031 522 APTIGDELLNTLKLALHCVDPSPSARPE-VLQVVQQLEEIR 561 (580)
Q Consensus 522 ~~~~~~~~~~l~~li~~cl~~~P~~Rps-~~ev~~~L~~~~ 561 (580)
..........+.+++.+||+.||++||+ +.++...|..+.
T Consensus 287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0000111235778999999999999994 666666666654
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1e-36 Score=302.11 Aligned_cols=228 Identities=21% Similarity=0.293 Sum_probs=173.8
Q ss_pred ccccccCceEEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHH-hcCCCCcceeeeeEEEC---CCCcEEEEEeeCC
Q 008031 293 EIMGKSTYGTVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLL-GKIRHPNLLALRAYYLG---PKGEKLLVFDYMP 367 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~---~~~~~~lv~e~~~ 367 (580)
+.||+|+||.||+|.+. +++.||+|+++. ...+.+|+.++ +..+||||+++++++.. .....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 78999999999999985 789999999853 24567888888 55699999999999864 2446899999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCC---CCCeEEeeccccccccccccc
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDD---STNAKISDFGLSRLMTAAANV 444 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~ 444 (580)
+|+|.+++.... ...+++..+..++.|++.||+|||+ .||+||||||+||+++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~----- 171 (299)
T 3m2w_A 99 GGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT----- 171 (299)
T ss_dssp SCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-----
T ss_pred CCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-----
Confidence 999999998753 3468999999999999999999999 49999999999999997 7889999999886432
Q ss_pred ceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCC
Q 008031 445 NVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPT 524 (580)
Q Consensus 445 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (580)
+..++.++||||+||++|||++|+.||......+.............. ....... ..
T Consensus 172 ------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~ 228 (299)
T 3m2w_A 172 ------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFPNPEW---SE 228 (299)
T ss_dssp ------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCC--SSCHHHH---TT
T ss_pred ------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccc--cCCchhc---cc
Confidence 245677999999999999999999999765433211111100000000 0000000 01
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 008031 525 IGDELLNTLKLALHCVDPSPSARPEVLQVVQQLE 558 (580)
Q Consensus 525 ~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~L~ 558 (580)
...++.+++.+||+.||++|||+.|++++-.
T Consensus 229 ---~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 229 ---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ---CCHHHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 1235678889999999999999999998744
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=9.7e-37 Score=315.80 Aligned_cols=240 Identities=18% Similarity=0.220 Sum_probs=177.3
Q ss_pred hhhccccccCceEEEEEEeC-CCCEEEEEEcccccc---ccHHHHHHHHHHHhcCCC-Ccceee---------e------
Q 008031 290 ATAEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT---KGQREFESEVSLLGKIRH-PNLLAL---------R------ 349 (580)
Q Consensus 290 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~~---------~------ 349 (580)
...+.||+|+||.||+|.+. +|+.||||+++.... ...+.+.+|+.+++.++| +|.... .
T Consensus 81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 3dzo_A 81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 160 (413)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred EEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence 34688999999999999965 799999999873332 235679999999999977 221111 1
Q ss_pred ------eEEECC----CCcEEEEEeeCCCCChhhhhhhc----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCC
Q 008031 350 ------AYYLGP----KGEKLLVFDYMPHGSLATFLHAR----GPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLT 415 (580)
Q Consensus 350 ------~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk 415 (580)
.++... ....+++|+++ +++|.++++.. .....+++..+..++.||++||+|||+ .||+|||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~iiHrDiK 238 (413)
T 3dzo_A 161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH-YGLVHTYLR 238 (413)
T ss_dssp C---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEECSCCC
T ss_pred CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcc
Confidence 111110 12356777766 68999998521 123357888999999999999999999 599999999
Q ss_pred CCCeeeCCCCCeEEeecccccccccccccceeeecCccccCCcccc----------ccCCCCCcccchhHHHHHHHHHcC
Q 008031 416 SSNVLLDDSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELS----------KLKKANTKTDVYSLGVTILELLTG 485 (580)
Q Consensus 416 ~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~s~G~~l~el~tg 485 (580)
|+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|||++|
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred cceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 99999999999999999998765433 233467 999999998 666788899999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 008031 486 KSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVLQVVQQ 556 (580)
Q Consensus 486 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~ev~~~ 556 (580)
+.||...+..+....+ . ......+ .++.+++.+||+.||++|||+.+++++
T Consensus 314 ~~Pf~~~~~~~~~~~~----------------~-~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 314 DLPNTDDAALGGSEWI----------------F-RSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp SCCCCTTGGGSCSGGG----------------G-SSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCcchhhhHHHH----------------H-hhcccCC---HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9999765432221111 0 0111222 356788889999999999997776543
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.3e-36 Score=304.92 Aligned_cols=244 Identities=17% Similarity=0.158 Sum_probs=182.1
Q ss_pred HHHhhhccccccCceEEEEEEeCCCCEEEEEEcccccc--------ccHHHHHHHHHHHhcCC---------CCcceeee
Q 008031 287 LLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKIT--------KGQREFESEVSLLGKIR---------HPNLLALR 349 (580)
Q Consensus 287 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------h~niv~~~ 349 (580)
-.|.+.+.||+|+||.||+|.+ +|+.||||+++.... ...+.+.+|+.+++.++ ||||+++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4588899999999999999998 689999999975421 22367889999998885 77777776
Q ss_pred eEEEC-----------------------------CCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008031 350 AYYLG-----------------------------PKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGL 400 (580)
Q Consensus 350 ~~~~~-----------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l 400 (580)
+.+.. ..+..++||||+++|++.+.+.+ ..+++..+..++.||+.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 66431 15689999999999987777644 3589999999999999999
Q ss_pred HHhh-cCCCcccCCCCCCCeeeCCCC--------------------CeEEeecccccccccccccceeeecCccccCCcc
Q 008031 401 LHLH-SNENIIHGNLTSSNVLLDDST--------------------NAKISDFGLSRLMTAAANVNVIATAGALGYRAPE 459 (580)
Q Consensus 401 ~~LH-~~~~i~H~Dlk~~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE 459 (580)
+||| + .||+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||
T Consensus 175 ~~lH~~-~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE 247 (336)
T 2vuw_A 175 AVAEAS-LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDED 247 (336)
T ss_dssp HHHHHH-HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSG
T ss_pred HHHHHh-CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChh
Confidence 9999 8 4999999999999999876 8999999999866432 246899999999
Q ss_pred ccccCCCCCcccchhHHHH-HHHHHcCCCCCCCCCCCChhHHHHHHhhhhccccccchhhhccCCCcHHHHHHHHHHHhh
Q 008031 460 LSKLKKANTKTDVYSLGVT-ILELLTGKSPGEPLNGAELPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALH 538 (580)
Q Consensus 460 ~~~~~~~~~~~Dv~s~G~~-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 538 (580)
++.+.. +.++||||+|++ .+++++|..||..... .......+.......... ..+.......++.+++.+
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~s~~~~dli~~ 318 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLTDKMLKQMTFKTKC------NTPAMKQIKRKIQEFHRT 318 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHHHHHHHTCCCSSCC------CSHHHHHHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcchhh--hhHHHHhhhhhhccCccc------chhhhhhcCHHHHHHHHH
Confidence 998666 889999998777 8889999999842100 000111111110000000 001112345678899999
Q ss_pred ccCCCCCCCCCHHHHH-HH
Q 008031 539 CVDPSPSARPEVLQVV-QQ 556 (580)
Q Consensus 539 cl~~~P~~Rps~~ev~-~~ 556 (580)
||+.| |+.|++ +|
T Consensus 319 ~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 319 MLNFS-----SATDLLCQH 332 (336)
T ss_dssp GGGSS-----SHHHHHHHC
T ss_pred HhccC-----CHHHHHhcC
Confidence 99976 999988 54
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=5.7e-30 Score=274.06 Aligned_cols=185 Identities=18% Similarity=0.109 Sum_probs=128.6
Q ss_pred cccccCceEEEEEEe-CCCCEEEEEEccccc----------cccHHHHHHHHHHHhcC-CCCcceeeeeEEECCCCcEEE
Q 008031 294 IMGKSTYGTVYKATL-EDGSQVAVKRLREKI----------TKGQREFESEVSLLGKI-RHPNLLALRAYYLGPKGEKLL 361 (580)
Q Consensus 294 ~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~l 361 (580)
..+.|++|.+..++. ..|+.+|+|.+.... ....++|.+|+++|+++ .|+||+++++++.+ ++..||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed-~~~~yL 319 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN-AQSGWL 319 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-SSEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-CCEEEE
Confidence 356677776666542 358899999986432 12235689999999999 79999999999987 678999
Q ss_pred EEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccc
Q 008031 362 VFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAA 441 (580)
Q Consensus 362 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 441 (580)
||||++|++|.+++...+ +++.. +|+.||+.||+|+|+ +||+||||||+|||+++++++||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~-~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEK-QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EEECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHH-TTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EEecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHH-CCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 999999999999998753 45553 588999999999999 59999999999999999999999999999876543
Q ss_pred cccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCC
Q 008031 442 ANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488 (580)
Q Consensus 442 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p 488 (580)
.. ......||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 393 ~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred Cc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 22 2234579999999999875 467789999999998887666544
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=5.2e-27 Score=249.77 Aligned_cols=183 Identities=15% Similarity=0.219 Sum_probs=143.7
Q ss_pred hccccccCceEEEEEEeCCCCEEEEEEccccccc--------cHHHHHHHHHHHhcCCCCcceeeeeEEECCCCcEEEEE
Q 008031 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITK--------GQREFESEVSLLGKIRHPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 363 (580)
.+.||+|+||.||+|... ++.+++|+....... ..+.+.+|++++++++||||+++..++.. .+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-LDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-TTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-CCccEEEE
Confidence 568999999999999544 788999986432211 12458999999999999999965555554 55779999
Q ss_pred eeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccc
Q 008031 364 DYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAAN 443 (580)
Q Consensus 364 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 443 (580)
||+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||+++ .+||+|||+++.......
T Consensus 419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~-~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK-NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH-TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH-CcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 99999999999875 45899999999999999 49999999999999999 999999999987755332
Q ss_pred cc------eeeecCccccCCcccccc--CCCCCcccchhHHHHHHHHHcCCCCCC
Q 008031 444 VN------VIATAGALGYRAPELSKL--KKANTKTDVYSLGVTILELLTGKSPGE 490 (580)
Q Consensus 444 ~~------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~ 490 (580)
.. .....||+.|||||++.. ..|+..+|+||..+-..+-..++.+|.
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 21 124579999999999886 567788999999988888888777764
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.92 E-value=9.4e-25 Score=243.87 Aligned_cols=189 Identities=40% Similarity=0.667 Sum_probs=150.6
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCcc----------------
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPAS---------------- 65 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------------- 65 (580)
+|+|++|++++.+|..++++++|++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..
T Consensus 494 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~ 573 (768)
T 3rgz_A 494 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGK 573 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSC
T ss_pred EEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccc
Confidence 5677777777667777777777777777777777667777777777777777777766555543
Q ss_pred ------------------------------------------------------CcCCCCCCEEECcCCCCCcccchhhh
Q 008031 66 ------------------------------------------------------FSNLSSLVSLTLESNNLDDQILDSLD 91 (580)
Q Consensus 66 ------------------------------------------------------~~~l~~L~~L~l~~N~l~~~~~~~~~ 91 (580)
|..+++|+.|+|++|++++.+|..++
T Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~ 653 (768)
T 3rgz_A 574 RYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG 653 (768)
T ss_dssp EEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGG
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHh
Confidence 23356778888888888888888899
Q ss_pred ccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccChhh-hhhcCCCc
Q 008031 92 KLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPTSL-ALKFNASS 170 (580)
Q Consensus 92 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~~~-~~~~~~~~ 170 (580)
.+++|+.|+|++|+++|.+|..++.+++|++|||++|+++|.+|..+..+++|++||+++|+++|.+|..- ...+....
T Consensus 654 ~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~ 733 (768)
T 3rgz_A 654 SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 733 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGG
T ss_pred ccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998753 34677788
Q ss_pred ccccccccCCCCCCCCCCCCC
Q 008031 171 FVGNIQLCGYSGSTPCPSPPA 191 (580)
Q Consensus 171 ~~~~~~~~~~~~~~~C~s~~~ 191 (580)
|.||+.+||.+.. .|.....
T Consensus 734 ~~gN~~Lcg~~l~-~C~~~~~ 753 (768)
T 3rgz_A 734 FLNNPGLCGYPLP-RCDPSNA 753 (768)
T ss_dssp GCSCTEEESTTSC-CCCSCC-
T ss_pred hcCCchhcCCCCc-CCCCCcc
Confidence 9999999998866 7876543
No 254
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=6.1e-23 Score=197.43 Aligned_cols=157 Identities=24% Similarity=0.299 Sum_probs=139.7
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
+.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 38 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 117 (251)
T 3m19_A 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCC
Confidence 46899999999877788999999999999999999888888899999999999999999777778889999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
+|++..+..|..+++|+.|+|++|+|++..+..+..+++|++|+|++|++++..+..|..+++|+.|++++|++.+.
T Consensus 118 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99887777788899999999999999977777788999999999999999977777889999999999999999876
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.89 E-value=1.2e-23 Score=209.11 Aligned_cols=182 Identities=31% Similarity=0.536 Sum_probs=121.9
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCC-CCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLS-SLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~ 79 (580)
++|+|++|+|++.+|..|.++++|++|+|++|.+++.+|..|..+++|++|+|++|+|++.+|..+..++ +|+.|+|++
T Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~ 183 (313)
T 1ogq_A 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183 (313)
T ss_dssp SEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCS
T ss_pred CEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcC
Confidence 3677777777777777777777777777777777766777777777777777777777766676676666 677777766
Q ss_pred CCCCcccchhhh-----------------------ccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccc
Q 008031 80 NNLDDQILDSLD-----------------------KLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPA 136 (580)
Q Consensus 80 N~l~~~~~~~~~-----------------------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 136 (580)
|.+++..|..+. .+++|+.|+|++|++++.++. +..+++|++|+|++|.+++.+|.
T Consensus 184 N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~ 262 (313)
T 1ogq_A 184 NRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQ 262 (313)
T ss_dssp SEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCG
T ss_pred CeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCCh
Confidence 666655555444 444555555555555433333 45566677777777777666777
Q ss_pred cccCcCCCCeeecccccCcCccChhhh-hhcCCCcccccccccCCCCC
Q 008031 137 SFSNLKSLSSFNVSYNNLSGPVPTSLA-LKFNASSFVGNIQLCGYSGS 183 (580)
Q Consensus 137 ~l~~l~~L~~l~l~~n~l~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~ 183 (580)
.|..+++|+.|++++|++++.+|.... ..+....+.+|+.+||.+..
T Consensus 263 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 263 GLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred HHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 777777777777777777777776421 23445556788888886544
No 256
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=4.1e-24 Score=208.64 Aligned_cols=141 Identities=19% Similarity=0.228 Sum_probs=114.4
Q ss_pred hhccccccCceEEEEEEeCCCCEEEEEEccccccc------------------cHHHHHHHHHHHhcCCCCcceeeeeEE
Q 008031 291 TAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITK------------------GQREFESEVSLLGKIRHPNLLALRAYY 352 (580)
Q Consensus 291 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~h~niv~~~~~~ 352 (580)
+.+.||+|+||.||+|.+.+|+.||+|.++..... ....+.+|+.++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 45899999999999999977999999998643221 2356889999999999 4 6666655
Q ss_pred ECCCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeec
Q 008031 353 LGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDF 432 (580)
Q Consensus 353 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Df 432 (580)
.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+ .||+||||||+|||++ ++.+||+||
T Consensus 171 ~~--~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~-~giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 171 AW--EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH-RGIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp EE--ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH-TTEECSCCSTTSEEEE-TTEEEECCC
T ss_pred ec--cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH-CCCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 43 46799999999999998 432 1245799999999999999 5999999999999999 999999999
Q ss_pred ccccccccccccceeeecCccccCCccccc
Q 008031 433 GLSRLMTAAANVNVIATAGALGYRAPELSK 462 (580)
Q Consensus 433 g~~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 462 (580)
|+++. +..++|||.+.
T Consensus 237 G~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 237 PQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp TTCEE--------------TTSTTHHHHHH
T ss_pred CCCeE--------------CCCCCHHHHHH
Confidence 99863 23478888764
No 257
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=7.7e-22 Score=191.90 Aligned_cols=162 Identities=23% Similarity=0.299 Sum_probs=135.8
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|+...+..|.++++|++|+|++|.|+.+.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 40 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 119 (270)
T 2o6q_A 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119 (270)
T ss_dssp SEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSS
T ss_pred CEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCC
Confidence 36888889888666668888999999999999988766667788899999999999988766677888899999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
+++...+..|..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++|++++.++.
T Consensus 120 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 199 (270)
T 2o6q_A 120 QLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEG 199 (270)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHH
Confidence 99888888888889999999999999876666688889999999999999877677788889999999999998876554
Q ss_pred hh
Q 008031 161 SL 162 (580)
Q Consensus 161 ~~ 162 (580)
.+
T Consensus 200 ~~ 201 (270)
T 2o6q_A 200 AF 201 (270)
T ss_dssp TT
T ss_pred Hh
Confidence 44
No 258
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.87 E-value=1.1e-21 Score=192.64 Aligned_cols=161 Identities=25% Similarity=0.287 Sum_probs=106.5
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCc-CCCCCCccCcCCCCCCEEECcCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNA-INGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
+|+|++|+|++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+ ++...+..|..+++|++|+|++|
T Consensus 36 ~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n 115 (285)
T 1ozn_A 36 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC 115 (285)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCC
Confidence 56777777775555566777777777777777766656666677777777777775 66455666666777777777777
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
.+++..+..+..+++|++|++++|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++|.+++..|.
T Consensus 116 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 195 (285)
T 1ozn_A 116 GLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 195 (285)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred cCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHh
Confidence 77666666666666777777777766655555566666667777776666654444566666666666666666665554
Q ss_pred hh
Q 008031 161 SL 162 (580)
Q Consensus 161 ~~ 162 (580)
.+
T Consensus 196 ~~ 197 (285)
T 1ozn_A 196 AF 197 (285)
T ss_dssp TT
T ss_pred Hc
Confidence 44
No 259
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=3e-21 Score=185.57 Aligned_cols=160 Identities=22% Similarity=0.350 Sum_probs=146.4
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
.++++++|.++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 17 ~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 93 (251)
T 3m19_A 17 KEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN 93 (251)
T ss_dssp TEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred eEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCC
Confidence 36899999999 7777665 68999999999999888889999999999999999999888888999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
+|+...+..|..+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++|++++.++.
T Consensus 94 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 94 QLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 99988888899999999999999999977777789999999999999999977777899999999999999999987775
Q ss_pred hhh
Q 008031 161 SLA 163 (580)
Q Consensus 161 ~~~ 163 (580)
.+.
T Consensus 174 ~~~ 176 (251)
T 3m19_A 174 AFD 176 (251)
T ss_dssp TTT
T ss_pred HHh
Confidence 553
No 260
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.86 E-value=2.2e-21 Score=190.50 Aligned_cols=158 Identities=27% Similarity=0.306 Sum_probs=139.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..+..|.++++|+.|+|++|.|++..+ ...+++|++|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 34 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N 110 (290)
T 1p9a_G 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFN 110 (290)
T ss_dssp CEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSS
T ss_pred CEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCC
Confidence 478999999998778889999999999999999985433 378999999999999998 77888999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++...+..|..+++|+.|++++|+++.. |.
T Consensus 111 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~i-p~ 189 (290)
T 1p9a_G 111 RLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTI-PK 189 (290)
T ss_dssp CCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCC-CT
T ss_pred cCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCcc-Ch
Confidence 99988888899999999999999999977777788999999999999999976667788999999999999999854 44
Q ss_pred hh
Q 008031 161 SL 162 (580)
Q Consensus 161 ~~ 162 (580)
.+
T Consensus 190 ~~ 191 (290)
T 1p9a_G 190 GF 191 (290)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.86 E-value=9e-22 Score=195.66 Aligned_cols=159 Identities=35% Similarity=0.613 Sum_probs=146.2
Q ss_pred CEEEecC-CcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQY-NNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~-N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|..+++|++|+|++|+|++.+|..|..+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 4799995 999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred CCCCcccchhhhccC-CCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCcc
Q 008031 80 NNLDDQILDSLDKLH-NLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPV 158 (580)
Q Consensus 80 N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~ 158 (580)
|.+++..|..+..+. +|+.|++++|++++.+|..+..+. |++|+|++|.+++..+..|..+++|+.|++++|++++.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 999989999999998 999999999999988888888887 899999999888888888888888888888888888766
Q ss_pred Ch
Q 008031 159 PT 160 (580)
Q Consensus 159 p~ 160 (580)
|.
T Consensus 238 ~~ 239 (313)
T 1ogq_A 238 GK 239 (313)
T ss_dssp GG
T ss_pred Cc
Confidence 65
No 262
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.86 E-value=5.1e-21 Score=186.26 Aligned_cols=158 Identities=25% Similarity=0.333 Sum_probs=129.5
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
+.|++++|.++ .+ +.+..+++|++|+|++|.+++. ..+..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 44 ~~L~l~~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 119 (272)
T 3rfs_A 44 DQIIANNSDIK-SV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119 (272)
T ss_dssp CEEECTTSCCC-CC-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred eeeeeCCCCcc-cc-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCC
Confidence 36788888887 33 3588888889999998888853 47888888899999888888777777888888999999888
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++|++++.+|.
T Consensus 120 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 199 (272)
T 3rfs_A 120 QLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDG 199 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHH
Confidence 88887777788888888999988888877777778888888999998888877777788888888889888888877665
Q ss_pred hh
Q 008031 161 SL 162 (580)
Q Consensus 161 ~~ 162 (580)
.+
T Consensus 200 ~~ 201 (272)
T 3rfs_A 200 VF 201 (272)
T ss_dssp TT
T ss_pred HH
Confidence 44
No 263
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.86 E-value=3.4e-21 Score=192.72 Aligned_cols=159 Identities=21% Similarity=0.363 Sum_probs=130.1
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcC---------CCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSN---------LSS 71 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~---------l~~ 71 (580)
++|+|++|.|+ .+|..++++++|++|+|++|.++ .+|..+..+++|++|+|++|++.+.+|..+.. +++
T Consensus 107 ~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~ 184 (328)
T 4fcg_A 107 QHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVN 184 (328)
T ss_dssp SEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTT
T ss_pred CEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCC
Confidence 47888888888 78888888888999999988888 67888888888888888888877777776654 888
Q ss_pred CCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeeccc
Q 008031 72 LVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSY 151 (580)
Q Consensus 72 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~ 151 (580)
|+.|+|++|+++ .+|..+..+++|++|+|++|++++ +|..+..+++|++|+|++|++.+.+|..+..+++|+.|++++
T Consensus 185 L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~ 262 (328)
T 4fcg_A 185 LQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKD 262 (328)
T ss_dssp CCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTT
T ss_pred CCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCC
Confidence 888888888887 566778888888888888888884 555688888888888888888888888888888888888888
Q ss_pred ccCcCccChhhh
Q 008031 152 NNLSGPVPTSLA 163 (580)
Q Consensus 152 n~l~~~~p~~~~ 163 (580)
|++.+.+|..+.
T Consensus 263 n~~~~~~p~~~~ 274 (328)
T 4fcg_A 263 CSNLLTLPLDIH 274 (328)
T ss_dssp CTTCCBCCTTGG
T ss_pred CCchhhcchhhh
Confidence 888888776653
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=4.5e-21 Score=180.19 Aligned_cols=156 Identities=24% Similarity=0.346 Sum_probs=143.0
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCC-ccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMP-SDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
.|++++|.++ .+|..+. ..+++|+|++|.|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 6899999999 6787664 357899999999997754 56899999999999999999877789999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
+|++..+..|..+++|++|+|++|+|++..|..+..+++|++|+|++|++++..|..|..+++|+.|++++|++.+..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 99998888899999999999999999988899999999999999999999988899999999999999999999977664
No 265
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=3.9e-21 Score=180.62 Aligned_cols=155 Identities=26% Similarity=0.397 Sum_probs=142.8
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
.+++++|.++ .+|..+. ++|++|+|++|.|+++.+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 5889999999 6787665 689999999999998878899999999999999999998889999999999999999999
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
|+.+.+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|.+++..+..|..+++|+.|++++|++.....
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 998877888999999999999999998889999999999999999999998888889999999999999999985433
No 266
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.7e-20 Score=177.48 Aligned_cols=154 Identities=24% Similarity=0.300 Sum_probs=141.6
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
.++.++|.++ .+|..+. ++|+.|+|++|.|+++.|..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|+
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 5789999999 7776664 899999999999998889999999999999999999996666778999999999999999
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
|+...+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|..+++|+.|++++|++.+..+
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99888888999999999999999999 778889999999999999999997777889999999999999999997765
No 267
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.85 E-value=8.6e-21 Score=186.10 Aligned_cols=162 Identities=29% Similarity=0.343 Sum_probs=123.8
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCc-cCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNK-ISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|+|++|.|++..+..|.++++|++|+|++|. ++...|..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 59 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 138 (285)
T 1ozn_A 59 TILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 138 (285)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCC
Confidence 367788888876667778888888888888886 7766577777788888888888888766677777788888888888
Q ss_pred CCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 80 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
|.++...+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|.+++..|..|..+++|+.|++++|++++.++
T Consensus 139 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 218 (285)
T 1ozn_A 139 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT 218 (285)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCH
T ss_pred CcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCH
Confidence 88877666667777888888888888876666667777888888888888877667777788888888888888876555
Q ss_pred hhh
Q 008031 160 TSL 162 (580)
Q Consensus 160 ~~~ 162 (580)
..+
T Consensus 219 ~~~ 221 (285)
T 1ozn_A 219 EAL 221 (285)
T ss_dssp HHH
T ss_pred HHc
Confidence 443
No 268
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.8e-20 Score=182.14 Aligned_cols=159 Identities=23% Similarity=0.303 Sum_probs=145.1
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|+...+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 64 ~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 143 (270)
T 2o6q_A 64 RLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143 (270)
T ss_dssp CEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCC
Confidence 47999999999655666799999999999999999877788899999999999999999888888999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
.|+...+..|..+++|+.|+|++|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++|++....+
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 144 ELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred cCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9998887789999999999999999998777789999999999999999997777779999999999999999976543
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=9.5e-21 Score=189.45 Aligned_cols=158 Identities=23% Similarity=0.379 Sum_probs=141.8
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|+ .+|+.++++++|++|+|++|.++ .+|..+..+++|++|+|++|+|+ .+|..|.++++|++|+|++|
T Consensus 84 ~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n 160 (328)
T 4fcg_A 84 VALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRAC 160 (328)
T ss_dssp CEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEE
T ss_pred eEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCC
Confidence 47899999999 78888999999999999999999 78888999999999999999999 78888999999999999998
Q ss_pred CCCcccchhhhc---------cCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeeccc
Q 008031 81 NLDDQILDSLDK---------LHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSY 151 (580)
Q Consensus 81 ~l~~~~~~~~~~---------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~ 151 (580)
++.+..|..+.. +++|++|+|++|+++ .+|..+..+++|++|+|++|.+++ +|..+..+++|+.|++++
T Consensus 161 ~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~ 238 (328)
T 4fcg_A 161 PELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRG 238 (328)
T ss_dssp TTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTT
T ss_pred CCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcC
Confidence 888888877654 899999999999999 788889999999999999999995 666799999999999999
Q ss_pred ccCcCccChhhh
Q 008031 152 NNLSGPVPTSLA 163 (580)
Q Consensus 152 n~l~~~~p~~~~ 163 (580)
|++.+.+|..+.
T Consensus 239 n~~~~~~p~~~~ 250 (328)
T 4fcg_A 239 CTALRNYPPIFG 250 (328)
T ss_dssp CTTCCBCCCCTT
T ss_pred CcchhhhHHHhc
Confidence 999988887654
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.84 E-value=2.6e-20 Score=181.23 Aligned_cols=158 Identities=27% Similarity=0.344 Sum_probs=143.9
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++ + +.+.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 66 ~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 143 (272)
T 3rfs_A 66 RYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHN 143 (272)
T ss_dssp CEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCC
Confidence 479999999995 3 47999999999999999999888888899999999999999999777778899999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
++++..+..+..+++|+.|++++|++++..+..+..+++|++|+|++|.+++..+..+..+++|+.|++++|++.+..|.
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 144 QLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 99988888889999999999999999988777789999999999999999988888899999999999999999987774
No 271
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.84 E-value=7.7e-21 Score=188.49 Aligned_cols=157 Identities=28% Similarity=0.347 Sum_probs=78.8
Q ss_pred EEEecCCccccc--ccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCC-ccCcCCCCCCEEECc
Q 008031 2 FLALQYNNLSGR--IPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLP-ASFSNLSSLVSLTLE 78 (580)
Q Consensus 2 ~L~L~~N~i~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~ 78 (580)
+|+|++|.|+.. .+..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|+++
T Consensus 56 ~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 134 (306)
T 2z66_A 56 KLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 134 (306)
T ss_dssp EEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECT
T ss_pred EEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECC
Confidence 455555555521 2344445555555555555555 234445555555555555555553322 344555555555555
Q ss_pred CCCCCcccchhhhccCCCCeeeeccccccc-cCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 79 SNNLDDQILDSLDKLHNLSVLNLKRNQISG-HIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 79 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
+|.+++..+..+..+++|++|++++|.+++ ..|..+..+++|++|+|++|.+++..+..|..+++|+.|++++|++++.
T Consensus 135 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 135 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp TSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 555544444445555555555555555543 3444455555555555555555544444555555555555555555544
Q ss_pred cC
Q 008031 158 VP 159 (580)
Q Consensus 158 ~p 159 (580)
.+
T Consensus 215 ~~ 216 (306)
T 2z66_A 215 DT 216 (306)
T ss_dssp CS
T ss_pred Ch
Confidence 33
No 272
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.4e-20 Score=175.50 Aligned_cols=156 Identities=22% Similarity=0.271 Sum_probs=130.2
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
.++++++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 5678888888 566544 4588999999999987777778889999999999999986666678889999999999999
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
+++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..+..+++|+.|++++|++.+..|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 9877777788899999999999999877777788889999999999999876666788899999999999998877663
No 273
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.84 E-value=1.3e-20 Score=210.28 Aligned_cols=161 Identities=37% Similarity=0.630 Sum_probs=81.9
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|++++.+|..+.++++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|+
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 34444444444444455555555555555555554445555555555555555555554455555555555555555555
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccChh
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPTS 161 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~~ 161 (580)
+++..|..+..+++|+.|+|++|++++.+|..++.+++|++|+|++|.+++.+|..+..+++|+.|++++|+++|.+|..
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 54444555555555555555555555455555555555555555555555445555555555555555555555544443
Q ss_pred h
Q 008031 162 L 162 (580)
Q Consensus 162 ~ 162 (580)
+
T Consensus 558 ~ 558 (768)
T 3rgz_A 558 M 558 (768)
T ss_dssp G
T ss_pred H
Confidence 3
No 274
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.83 E-value=3.3e-20 Score=194.41 Aligned_cols=160 Identities=25% Similarity=0.296 Sum_probs=104.5
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|+.|+|++|.|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 78 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 157 (452)
T 3zyi_A 78 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157 (452)
T ss_dssp SEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSC
T ss_pred cEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCC
Confidence 36777777777666777777777777777777777666677777777777777777777555556777777777777777
Q ss_pred CCCcccchh-------------------------hhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCccc
Q 008031 81 NLDDQILDS-------------------------LDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135 (580)
Q Consensus 81 ~l~~~~~~~-------------------------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 135 (580)
+|+...+.. |..+++|+.|+|++|++++. | .+..+++|+.|+|++|.+++..+
T Consensus 158 ~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~ 235 (452)
T 3zyi_A 158 PIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRP 235 (452)
T ss_dssp CCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECG
T ss_pred CcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCc
Confidence 766544332 44455555555555555532 2 34555666666666666665556
Q ss_pred ccccCcCCCCeeecccccCcCccChhh
Q 008031 136 ASFSNLKSLSSFNVSYNNLSGPVPTSL 162 (580)
Q Consensus 136 ~~l~~l~~L~~l~l~~n~l~~~~p~~~ 162 (580)
..|..+++|+.|++++|++++..|..+
T Consensus 236 ~~~~~l~~L~~L~L~~n~l~~~~~~~~ 262 (452)
T 3zyi_A 236 GSFHGLSSLKKLWVMNSQVSLIERNAF 262 (452)
T ss_dssp GGGTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ccccCccCCCEEEeCCCcCceECHHHh
Confidence 666666666666666666665555443
No 275
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=1.4e-19 Score=168.70 Aligned_cols=156 Identities=24% Similarity=0.310 Sum_probs=141.0
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|++|+|++|.|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 31 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 110 (208)
T 2o6s_A 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTN 110 (208)
T ss_dssp SEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCC
Confidence 47999999999766677899999999999999999777778899999999999999999777777899999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
+|++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|.+.+ .+++|+.|+++.|+++|.+|.
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 111 QLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBC
T ss_pred cCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeec
Confidence 9998888888999999999999999997777778999999999999998874 456899999999999999997
Q ss_pred hhh
Q 008031 161 SLA 163 (580)
Q Consensus 161 ~~~ 163 (580)
.+.
T Consensus 184 ~~~ 186 (208)
T 2o6s_A 184 SAG 186 (208)
T ss_dssp TTS
T ss_pred cCc
Confidence 664
No 276
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.82 E-value=5e-20 Score=192.32 Aligned_cols=157 Identities=27% Similarity=0.315 Sum_probs=83.9
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|+|+...+..|.++++|++|+|++|.|+.+.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|.
T Consensus 68 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 147 (440)
T 3zyj_A 68 LLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNP 147 (440)
T ss_dssp EEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCC
T ss_pred EEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCc
Confidence 45566666665555555556666666666665555555555555555555555555554444445555555555555555
Q ss_pred CCcccc-------------------------hhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccc
Q 008031 82 LDDQIL-------------------------DSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPA 136 (580)
Q Consensus 82 l~~~~~-------------------------~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 136 (580)
|+...+ ..|..+++|+.|+|++|+++ .+| .+..+++|+.|+|++|.+++..+.
T Consensus 148 i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~ 225 (440)
T 3zyj_A 148 IESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPG 225 (440)
T ss_dssp CCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTT
T ss_pred ccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChh
Confidence 543332 23444555555555555554 222 244455555555555555554455
Q ss_pred cccCcCCCCeeecccccCcCccCh
Q 008031 137 SFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 137 ~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
.|..+++|+.|++++|++++..+.
T Consensus 226 ~~~~l~~L~~L~L~~n~l~~~~~~ 249 (440)
T 3zyj_A 226 SFQGLMHLQKLWMIQSQIQVIERN 249 (440)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTT
T ss_pred hhccCccCCEEECCCCceeEEChh
Confidence 555555555555555555544443
No 277
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.82 E-value=3.5e-20 Score=183.74 Aligned_cols=178 Identities=22% Similarity=0.349 Sum_probs=144.0
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCC-ccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMP-SDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|+|++|.|+ .+|..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|++++..+..|..+++|++|+|++
T Consensus 81 ~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 159 (306)
T 2z66_A 81 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 159 (306)
T ss_dssp CEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCC
Confidence 47899999988 577778889999999999999886554 5788889999999999998877888888889999999999
Q ss_pred CCCCc-ccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCcc
Q 008031 80 NNLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPV 158 (580)
Q Consensus 80 N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~ 158 (580)
|.+++ ..|..+..+++|+.|+|++|++++..|..+..+++|++|+|++|.+++..+..+..+++|+.|++++|++++..
T Consensus 160 n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 239 (306)
T 2z66_A 160 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 239 (306)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCS
T ss_pred CccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccC
Confidence 98876 57778888889999999999998877888888899999999999988766667888889999999999998877
Q ss_pred Chhhhh---hcCCCcccccccccC
Q 008031 159 PTSLAL---KFNASSFVGNIQLCG 179 (580)
Q Consensus 159 p~~~~~---~~~~~~~~~~~~~~~ 179 (580)
|..+.. .+......+|+..|.
T Consensus 240 ~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 240 KQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SSSCCCCCTTCCEEECTTCCEECS
T ss_pred HHHHHhhhccCCEEEccCCCeecc
Confidence 765542 222333345555554
No 278
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=6.6e-20 Score=186.03 Aligned_cols=175 Identities=28% Similarity=0.238 Sum_probs=145.4
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCcccc-CCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLG-RLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++++++|+|+ .+|..+. ..++.|+|++|.|+++.+..|. .+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 6899999999 6777664 4689999999999988787887 8999999999999999777788999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccc---cCcCCCCeeecccccCcCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASF---SNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l---~~l~~L~~l~l~~n~l~~~ 157 (580)
+|+...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.|++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9998888889999999999999999998888999999999999999999996555555 6799999999999999976
Q ss_pred cChhhhhh----cCCCcccccccccC
Q 008031 158 VPTSLALK----FNASSFVGNIQLCG 179 (580)
Q Consensus 158 ~p~~~~~~----~~~~~~~~~~~~~~ 179 (580)
++..+... +......+|+..|.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CHHHhhhccHhhcceEEecCCCccCC
Confidence 55544321 12334456655554
No 279
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.82 E-value=5e-20 Score=179.78 Aligned_cols=162 Identities=28% Similarity=0.317 Sum_probs=139.4
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|++++|
T Consensus 31 ~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 110 (276)
T 2z62_A 31 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110 (276)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCC
Confidence 47899999999777778999999999999999999777778999999999999999999777788999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeecccccccc-CCccccCCCCCcEEEccccccCCcccccccCcCCCC----eeecccccCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGH-IPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLS----SFNVSYNNLS 155 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~----~l~l~~n~l~ 155 (580)
.+++..+..+..+++|++|++++|++++. +|..+..+++|++|+|++|.+++..+..+..+++|+ .|++++|+++
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~ 190 (276)
T 2z62_A 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (276)
T ss_dssp CCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCC
T ss_pred CccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCccc
Confidence 99887777788999999999999999864 588899999999999999999877667777776666 7788888887
Q ss_pred CccChhh
Q 008031 156 GPVPTSL 162 (580)
Q Consensus 156 ~~~p~~~ 162 (580)
+..+..+
T Consensus 191 ~~~~~~~ 197 (276)
T 2z62_A 191 FIQPGAF 197 (276)
T ss_dssp EECTTSS
T ss_pred ccCcccc
Confidence 6655443
No 280
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.82 E-value=4.2e-20 Score=180.30 Aligned_cols=158 Identities=24% Similarity=0.325 Sum_probs=116.7
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCC
Q 008031 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82 (580)
Q Consensus 3 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 82 (580)
++.++.++. .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 445555555 5565543 4678888888888766666777788888888888888766666777788888888888888
Q ss_pred CcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCc-ccccccCcCCCCeeecccccCcCccChh
Q 008031 83 DDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGE-IPASFSNLKSLSSFNVSYNNLSGPVPTS 161 (580)
Q Consensus 83 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~l~l~~n~l~~~~p~~ 161 (580)
++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|.+++. +|..+..+++|+.|++++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 777777777788888888888888766666677788888888888888753 4777788888888888888887665554
Q ss_pred hh
Q 008031 162 LA 163 (580)
Q Consensus 162 ~~ 163 (580)
+.
T Consensus 169 ~~ 170 (276)
T 2z62_A 169 LR 170 (276)
T ss_dssp GH
T ss_pred hh
Confidence 43
No 281
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.82 E-value=8.6e-20 Score=205.89 Aligned_cols=82 Identities=27% Similarity=0.348 Sum_probs=45.6
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|+|++..+..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.
T Consensus 294 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 373 (844)
T 3j0a_A 294 VLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNA 373 (844)
T ss_dssp EEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCC
T ss_pred EEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCC
Confidence 45555555555555555555555555555555555555555555555555555555554444455555555555555555
Q ss_pred CC
Q 008031 82 LD 83 (580)
Q Consensus 82 l~ 83 (580)
++
T Consensus 374 l~ 375 (844)
T 3j0a_A 374 LT 375 (844)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.81 E-value=1.4e-19 Score=189.91 Aligned_cols=90 Identities=23% Similarity=0.295 Sum_probs=45.9
Q ss_pred CCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeeccc
Q 008031 72 LVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSY 151 (580)
Q Consensus 72 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~ 151 (580)
|+.|++++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 44444444444444444555555555555555555544455555555555555555555544444555555555555555
Q ss_pred ccCcCccChh
Q 008031 152 NNLSGPVPTS 161 (580)
Q Consensus 152 n~l~~~~p~~ 161 (580)
|++++..|..
T Consensus 357 N~l~~~~~~~ 366 (455)
T 3v47_A 357 NHIRALGDQS 366 (455)
T ss_dssp SCCCEECTTT
T ss_pred CcccccChhh
Confidence 5555444433
No 283
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.81 E-value=2.3e-19 Score=175.97 Aligned_cols=153 Identities=25% Similarity=0.272 Sum_probs=139.1
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++. +. ...+++|++|+|++|.|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 58 ~~L~L~~n~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 58 TQLNLDRAELTKL-QV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp CEEECTTSCCCEE-EC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CEEECCCCccCcc-cC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 4799999999954 43 388999999999999999 67888999999999999999999777788999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
+|+...+..|..+++|+.|+|++|+|+...+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++...
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 999888888999999999999999999777777889999999999999999 6788888889999999999999754
No 284
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=5.2e-20 Score=186.76 Aligned_cols=158 Identities=28% Similarity=0.310 Sum_probs=140.6
Q ss_pred CEEEecCCccccccccccc-CCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLG-KLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|+|++|+|++..+..+. ++++|+.|+|++|.|+++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 42 ~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 121 (361)
T 2xot_A 42 ALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYN 121 (361)
T ss_dssp SEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCC
Confidence 4799999999977777787 999999999999999988888999999999999999999977777899999999999999
Q ss_pred CCCCcccchhhhccCCCCeeeeccccccccCCccc---cCCCCCcEEEccccccCCcccccccCcCC--CCeeecccccC
Q 008031 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTI---GNISTLTILDLSQNKLSGEIPASFSNLKS--LSSFNVSYNNL 154 (580)
Q Consensus 80 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~~~~~~l~~l~~--L~~l~l~~n~l 154 (580)
|+|+...+..|..+++|+.|+|++|+|+...+..+ ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|++
T Consensus 122 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 122 NHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCE
T ss_pred CcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCc
Confidence 99999989999999999999999999996555445 67999999999999999766677888887 48899999999
Q ss_pred cCcc
Q 008031 155 SGPV 158 (580)
Q Consensus 155 ~~~~ 158 (580)
....
T Consensus 202 ~C~C 205 (361)
T 2xot_A 202 ECDC 205 (361)
T ss_dssp ECCH
T ss_pred cCCc
Confidence 8543
No 285
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=191.68 Aligned_cols=162 Identities=22% Similarity=0.265 Sum_probs=147.1
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|++|+|++|.|+++.|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 35 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 114 (477)
T 2id5_A 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 114 (477)
T ss_dssp SEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTS
T ss_pred cEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCC
Confidence 47999999999877889999999999999999999888999999999999999999999666677899999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
.++...+..|..+++|+.|+|++|.+++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+..+.
T Consensus 115 ~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~ 194 (477)
T 2id5_A 115 KIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY 194 (477)
T ss_dssp CCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTT
T ss_pred ccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChh
Confidence 99998888999999999999999999988888999999999999999999977777899999999999999999876664
Q ss_pred hh
Q 008031 161 SL 162 (580)
Q Consensus 161 ~~ 162 (580)
.+
T Consensus 195 ~~ 196 (477)
T 2id5_A 195 SF 196 (477)
T ss_dssp CS
T ss_pred hc
Confidence 44
No 286
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.81 E-value=7.5e-20 Score=191.95 Aligned_cols=139 Identities=26% Similarity=0.306 Sum_probs=122.7
Q ss_pred CCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeee
Q 008031 22 SELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNL 101 (580)
Q Consensus 22 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 101 (580)
++|+.|+|++|.+++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+++..+..+..+++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 57889999999998888888899999999999999998777888889999999999999998888888888999999999
Q ss_pred ccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 102 KRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 102 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
++|++++..|..+..+++|++|+|++|++++..+..|..+++|+.|++++|++++.+|.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99999888888888999999999999999876667788899999999999999988773
No 287
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.80 E-value=4.7e-19 Score=163.51 Aligned_cols=148 Identities=16% Similarity=0.315 Sum_probs=128.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|+ .++ .+..+++|++|++++|.++. +..+..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 47 ~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n 122 (197)
T 4ezg_A 47 TYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHS 122 (197)
T ss_dssp CEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSS
T ss_pred cEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCC
Confidence 47899999999 566 69999999999999998873 347889999999999999999778888999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeecccc-ccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcC
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQ-ISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSG 156 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~ 156 (580)
++++..+..+..+++|++|++++|+ ++ .++ .+..+++|++|++++|.+++ ++ .+..+++|+.|++++|++.+
T Consensus 123 ~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 123 AHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp BCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred ccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 9988888899999999999999998 66 455 68899999999999999986 33 78899999999999999864
No 288
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.80 E-value=6.8e-20 Score=182.08 Aligned_cols=161 Identities=23% Similarity=0.267 Sum_probs=132.3
Q ss_pred CEEEecCCcccccccccc--cCCCCCcEEEccCCccCCCCCccccCC-----CCCCEEEeeCCcCCCCCCccCcCCCCCC
Q 008031 1 MFLALQYNNLSGRIPASL--GKLSELQEISLSHNKISGVMPSDLGRL-----SRLRILDFSYNAINGSLPASFSNLSSLV 73 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 73 (580)
++|+|++|+|++.+|..+ ..+++|++|+|++|.+++. |..+..+ ++|++|+|++|+|++..+..|..+++|+
T Consensus 98 ~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 176 (312)
T 1wwl_A 98 QELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALS 176 (312)
T ss_dssp CEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCC
T ss_pred cEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCC
Confidence 478999999998888876 8899999999999999976 7777777 8999999999999987778999999999
Q ss_pred EEECcCCCCCcc--cchhh--hccCCCCeeeeccccccc---cCCccccCCCCCcEEEccccccCCccc-ccccCcCCCC
Q 008031 74 SLTLESNNLDDQ--ILDSL--DKLHNLSVLNLKRNQISG---HIPSTIGNISTLTILDLSQNKLSGEIP-ASFSNLKSLS 145 (580)
Q Consensus 74 ~L~l~~N~l~~~--~~~~~--~~l~~L~~L~l~~N~l~~---~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~ 145 (580)
+|+|++|++.+. .+..+ ..+++|++|+|++|++++ .....+..+++|++|+|++|.+++..| ..+..+++|+
T Consensus 177 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 256 (312)
T 1wwl_A 177 TLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLN 256 (312)
T ss_dssp EEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCC
T ss_pred EEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCC
Confidence 999999998764 23344 788999999999999983 222334577899999999999987664 5567789999
Q ss_pred eeecccccCcCccChhhh
Q 008031 146 SFNVSYNNLSGPVPTSLA 163 (580)
Q Consensus 146 ~l~l~~n~l~~~~p~~~~ 163 (580)
.|++++|+++ .+|..+.
T Consensus 257 ~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 257 SLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp EEECTTSCCS-SCCSSCC
T ss_pred EEECCCCccC-hhhhhcc
Confidence 9999999998 5555443
No 289
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=5.3e-20 Score=177.33 Aligned_cols=135 Identities=17% Similarity=0.237 Sum_probs=103.9
Q ss_pred hhhccccccCceEEEEEEe-CCCCE--EEEEEccccccc------------------------cHHHHHHHHHHHhcCCC
Q 008031 290 ATAEIMGKSTYGTVYKATL-EDGSQ--VAVKRLREKITK------------------------GQREFESEVSLLGKIRH 342 (580)
Q Consensus 290 ~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~h 342 (580)
++.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+.++.+++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3467899999999999998 67989 999987543211 11357899999999988
Q ss_pred Ccc--eeeeeEEECCCCcEEEEEeeCCC-C----ChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCcccCCC
Q 008031 343 PNL--LALRAYYLGPKGEKLLVFDYMPH-G----SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLH-SNENIIHGNL 414 (580)
Q Consensus 343 ~ni--v~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH-~~~~i~H~Dl 414 (580)
+++ ...+++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| + .||+||||
T Consensus 130 ~~i~~p~~~~~-----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~-~givHrDl 197 (258)
T 1zth_A 130 AGVSVPQPYTY-----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE-AELVHADL 197 (258)
T ss_dssp TTCCCCCEEEE-----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT-SCEECSSC
T ss_pred CCCCCCeEEEc-----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH-CCEEeCCC
Confidence 764 333332 256899999942 4 56655432 224467789999999999999 8 59999999
Q ss_pred CCCCeeeCCCCCeEEeeccccccc
Q 008031 415 TSSNVLLDDSTNAKISDFGLSRLM 438 (580)
Q Consensus 415 k~~Nil~~~~~~~kl~Dfg~~~~~ 438 (580)
||.|||++. .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 8999999999754
No 290
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.80 E-value=1.7e-19 Score=196.48 Aligned_cols=155 Identities=26% Similarity=0.390 Sum_probs=122.8
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCC-ccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMP-SDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
+|+|++|.++ .+|..+.++++|+.|++++|.+++..| ..+..+++|++|++++|++++..|..|..+++|+.|++++|
T Consensus 380 ~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 458 (606)
T 3vq2_A 380 HLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGN 458 (606)
T ss_dssp EEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTC
T ss_pred EeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCC
Confidence 5677777776 355677777888888888888776666 57777888888888888887777777888888888888888
Q ss_pred CCCc-ccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 81 NLDD-QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 81 ~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
.+++ ..|..+..+++|+.|+|++|++++..|..+..+++|++|+|++|++++..|..|..+++|+.|++++|+++..
T Consensus 459 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 536 (606)
T 3vq2_A 459 SFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS 536 (606)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCE
T ss_pred cCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCccc
Confidence 8876 4677778888888888888888877777788888888888888888877788888888888888888888743
No 291
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.79 E-value=5.2e-19 Score=192.55 Aligned_cols=160 Identities=23% Similarity=0.321 Sum_probs=100.2
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCc-cccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPS-DLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
+|+|++|.+++..+..|.++++|+.|++++|.+++..+. .+..+++|++|++++|++++..|..|..+++|++|+|++|
T Consensus 380 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 459 (606)
T 3t6q_A 380 SLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGN 459 (606)
T ss_dssp EEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCC
Confidence 456666666655555666666666666666666544433 3556666666666666666555666666666666666666
Q ss_pred CCCccc---chhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 81 NLDDQI---LDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 81 ~l~~~~---~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
.+++.. +..+..+++|+.|++++|++++..|..+..+++|++|+|++|++++..|..+..++.| .|++++|++++.
T Consensus 460 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~ 538 (606)
T 3t6q_A 460 HFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISII 538 (606)
T ss_dssp BCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCC
T ss_pred CCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccccc
Confidence 665421 2345666666666666666666666666666666666666666666666666666666 666677766666
Q ss_pred cChhh
Q 008031 158 VPTSL 162 (580)
Q Consensus 158 ~p~~~ 162 (580)
+|..+
T Consensus 539 ~~~~~ 543 (606)
T 3t6q_A 539 LPSLL 543 (606)
T ss_dssp CGGGH
T ss_pred CHhhc
Confidence 55544
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.79 E-value=1.3e-18 Score=174.40 Aligned_cols=157 Identities=22% Similarity=0.337 Sum_probs=117.1
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCC--CCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISG--VMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
+|+|++|.|++..+..|.++++|++|++++|.++. ..+..|..+++|+.|++++|+++ .+|..+. ++|+.|+|++
T Consensus 125 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~ 201 (330)
T 1xku_A 125 ELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDG 201 (330)
T ss_dssp EEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTT
T ss_pred EEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCC
Confidence 56666666665555567777777777777777752 55667777777777777777777 4454443 6788888888
Q ss_pred CCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 80 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
|.+++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+
T Consensus 202 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 202 NKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp SCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 8887777777888888888888888888777777888888888888888887 677778888888888888888886655
Q ss_pred hhh
Q 008031 160 TSL 162 (580)
Q Consensus 160 ~~~ 162 (580)
..+
T Consensus 281 ~~f 283 (330)
T 1xku_A 281 NDF 283 (330)
T ss_dssp TSS
T ss_pred hhc
Confidence 544
No 293
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.78 E-value=4.8e-19 Score=168.80 Aligned_cols=159 Identities=16% Similarity=0.218 Sum_probs=132.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCc-cCCCCCccccCCCCCCEEEeeC-CcCCCCCCccCcCCCCCCEEECc
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNK-ISGVMPSDLGRLSRLRILDFSY-NAINGSLPASFSNLSSLVSLTLE 78 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~ 78 (580)
++|+|++|+|++..+..|.++++|+.|+|++|. ++.+.+..|..+++|++|+|++ |+|++..+..|..+++|+.|+++
T Consensus 34 ~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~ 113 (239)
T 2xwt_C 34 QTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIF 113 (239)
T ss_dssp CEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEE
T ss_pred cEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCC
Confidence 478999999997666689999999999999997 8877777899999999999998 99997666788999999999999
Q ss_pred CCCCCcccchhhhccCCCC---eeeeccc-cccccCCccccCCCCCc-EEEccccccCCcccc-cccCcCCCCeeecccc
Q 008031 79 SNNLDDQILDSLDKLHNLS---VLNLKRN-QISGHIPSTIGNISTLT-ILDLSQNKLSGEIPA-SFSNLKSLSSFNVSYN 152 (580)
Q Consensus 79 ~N~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~-~l~~l~~L~~l~l~~n 152 (580)
+|.+++ +|. +..+.+|+ .|++++| ++++..+..|..+++|+ +|++++|.++ .+|. .|.. ++|+.|++++|
T Consensus 114 ~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 114 NTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEECTTC
T ss_pred CCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEcCCC
Confidence 999977 444 77888888 9999999 89877777788899999 9999999998 4444 4444 88999999999
Q ss_pred c-CcCccChhhh
Q 008031 153 N-LSGPVPTSLA 163 (580)
Q Consensus 153 ~-l~~~~p~~~~ 163 (580)
+ +++..+..+.
T Consensus 190 ~~l~~i~~~~~~ 201 (239)
T 2xwt_C 190 KYLTVIDKDAFG 201 (239)
T ss_dssp TTCCEECTTTTT
T ss_pred CCcccCCHHHhh
Confidence 5 8866555443
No 294
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.78 E-value=4.3e-19 Score=193.22 Aligned_cols=163 Identities=20% Similarity=0.209 Sum_probs=144.0
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..|..|+++++|++|+|++|.++++.|..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 36 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 115 (606)
T 3t6q_A 36 ECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQT 115 (606)
T ss_dssp CEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTS
T ss_pred cEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecccc
Confidence 47899999999877889999999999999999999888889999999999999999999888889999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCC--eeecccccCcCcc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLS--SFNVSYNNLSGPV 158 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~--~l~l~~n~l~~~~ 158 (580)
.+++..+..+..+++|++|++++|++++.....+..+++|++|++++|.+++..+..|..+++|+ .|++++|++++..
T Consensus 116 ~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~ 195 (606)
T 3t6q_A 116 GISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIE 195 (606)
T ss_dssp CCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEEC
T ss_pred CcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccC
Confidence 99888788899999999999999999875545555689999999999999977788899999998 8999999999887
Q ss_pred Chhhh
Q 008031 159 PTSLA 163 (580)
Q Consensus 159 p~~~~ 163 (580)
|..+.
T Consensus 196 ~~~~~ 200 (606)
T 3t6q_A 196 PGAFD 200 (606)
T ss_dssp TTTTT
T ss_pred hhHhh
Confidence 76553
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.78 E-value=2e-19 Score=182.00 Aligned_cols=156 Identities=21% Similarity=0.255 Sum_probs=112.7
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|+.|+|++|.+++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 55 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 134 (353)
T 2z80_A 55 KSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGN 134 (353)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTC
T ss_pred cEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCC
Confidence 36777777777555556777777777777777777666667777777777777777777444444777777777777777
Q ss_pred CCCcccc-hhhhccCCCCeeeeccc-cccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcC
Q 008031 81 NLDDQIL-DSLDKLHNLSVLNLKRN-QISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSG 156 (580)
Q Consensus 81 ~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~ 156 (580)
+++.... ..+..+++|+.|++++| .++...+..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+..
T Consensus 135 ~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 135 PYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp CCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred CCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 7765444 46677777777777777 3665556667777777777777777776667777777777777777777753
No 296
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.78 E-value=1.4e-19 Score=197.60 Aligned_cols=156 Identities=24% Similarity=0.414 Sum_probs=120.4
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCc------------------------------------------------
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNK------------------------------------------------ 33 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~------------------------------------------------ 33 (580)
.|+|++|.++|.+|+.|++|++|+.|+|++|.
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHH
Confidence 57788888888888888888888888887773
Q ss_pred ------------------------------cCCCCCccccCCCCCCEEEeeCCcCCCC-----------------CCccC
Q 008031 34 ------------------------------ISGVMPSDLGRLSRLRILDFSYNAINGS-----------------LPASF 66 (580)
Q Consensus 34 ------------------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------~~~~~ 66 (580)
+++ +|..|+.+++|++|+|++|+|++. +|..+
T Consensus 165 l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l 243 (636)
T 4eco_A 165 CINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243 (636)
T ss_dssp HHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred HhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhh
Confidence 334 566777788888888888888764 77777
Q ss_pred c--CCCCCCEEECcCCCCCcccchhhhccCCCCeeeecccc-ccc-cCCccccCC------CCCcEEEccccccCCcccc
Q 008031 67 S--NLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQ-ISG-HIPSTIGNI------STLTILDLSQNKLSGEIPA 136 (580)
Q Consensus 67 ~--~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~-~~~~~~~~l------~~L~~L~l~~N~l~~~~~~ 136 (580)
. ++++|++|+|++|++.+.+|..+..+++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|.++ .+|.
T Consensus 244 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp CGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred hhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 7 78888888888888777777778888888888888887 776 677776665 77888888888887 6776
Q ss_pred --cccCcCCCCeeecccccCcCccC
Q 008031 137 --SFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 137 --~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
.+..+++|+.|++++|+++|.+|
T Consensus 323 ~~~l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 323 ETSLQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp HHHHTTCTTCCEEECCSCCCEEECC
T ss_pred hhhhccCCCCCEEeCcCCcCccchh
Confidence 77788888888888888877777
No 297
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.78 E-value=1.7e-18 Score=191.21 Aligned_cols=178 Identities=28% Similarity=0.294 Sum_probs=122.7
Q ss_pred EEEecCCccccccc-ccccCCCCCcEEEccCCccCC--------------------------CCCccccCCCCCCEEEee
Q 008031 2 FLALQYNNLSGRIP-ASLGKLSELQEISLSHNKISG--------------------------VMPSDLGRLSRLRILDFS 54 (580)
Q Consensus 2 ~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~--------------------------~~~~~~~~l~~L~~L~l~ 54 (580)
+|+|++|.+++.++ ..+.++++|++|+|++|.+++ ..|..|..+++|+.|+|+
T Consensus 409 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls 488 (680)
T 1ziw_A 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488 (680)
T ss_dssp EEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECC
T ss_pred EEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECC
Confidence 46666666654443 455555555555555555443 456667777778888888
Q ss_pred CCcCCCCCCccCcCCCCCCEEECcCCCCCcccch--------hhhccCCCCeeeeccccccccCCccccCCCCCcEEEcc
Q 008031 55 YNAINGSLPASFSNLSSLVSLTLESNNLDDQILD--------SLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLS 126 (580)
Q Consensus 55 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~--------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 126 (580)
+|+|++..+..|..+++|++|+|++|.+++..+. .+..+++|+.|+|++|+++...+..|..+++|+.|+|+
T Consensus 489 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECC
Confidence 8888766666777788888888888887654322 26677888888888888885555567888888888888
Q ss_pred ccccCCcccccccCcCCCCeeecccccCcCccChhhh---hhcCCCcccccccccC
Q 008031 127 QNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPTSLA---LKFNASSFVGNIQLCG 179 (580)
Q Consensus 127 ~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~~~~---~~~~~~~~~~~~~~~~ 179 (580)
+|++++..+..|..+++|+.|++++|++++.+|..+. ..+......+|+..|+
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 8888876666778888888888888888887776554 2233333445555554
No 298
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=1e-18 Score=160.36 Aligned_cols=132 Identities=23% Similarity=0.316 Sum_probs=85.1
Q ss_pred cEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCc-cCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeecc
Q 008031 25 QEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPA-SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKR 103 (580)
Q Consensus 25 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 103 (580)
+.|++++|.++ .+|..+.. +|++|+|++|+|++..+. .|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56666666665 34443332 666666666666644433 366666666666666666666666666666666666666
Q ss_pred ccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 104 NQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 104 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
|+|++..+..+..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 66666666666666777777777777766666666777777777777777766554
No 299
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=9.1e-19 Score=164.41 Aligned_cols=132 Identities=27% Similarity=0.355 Sum_probs=123.5
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|+.|+|++|.|+++.|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 35 ~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 114 (220)
T 2v9t_B 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNAN 114 (220)
T ss_dssp CEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCC
Confidence 47999999999777778999999999999999999888999999999999999999999666677899999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCC
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG 132 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 132 (580)
+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|.+.-
T Consensus 115 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 115 KINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9999999999999999999999999998888889999999999999999974
No 300
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.78 E-value=3e-19 Score=177.38 Aligned_cols=153 Identities=23% Similarity=0.280 Sum_probs=132.1
Q ss_pred CEEEecCCcccccccccccCC-----CCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCC--CCccC--cCCCC
Q 008031 1 MFLALQYNNLSGRIPASLGKL-----SELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS--LPASF--SNLSS 71 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~--~~l~~ 71 (580)
++|+|++|+|++. |..+..+ ++|++|+|++|.|++..|..|..+++|++|+|++|++.+. .+..+ ..+++
T Consensus 124 ~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~ 202 (312)
T 1wwl_A 124 NILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPT 202 (312)
T ss_dssp SEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTT
T ss_pred cEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCC
Confidence 4799999999976 8888887 9999999999999988889999999999999999998754 23334 88999
Q ss_pred CCEEECcCCCCCcc---cchhhhccCCCCeeeeccccccccCC-ccccCCCCCcEEEccccccCCcccccccCcCCCCee
Q 008031 72 LVSLTLESNNLDDQ---ILDSLDKLHNLSVLNLKRNQISGHIP-STIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSF 147 (580)
Q Consensus 72 L~~L~l~~N~l~~~---~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l 147 (580)
|++|+|++|+|++. ....+..+++|+.|+|++|++++..| ..+..+++|++|+|++|.++ .+|..+. ++|+.|
T Consensus 203 L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L 279 (312)
T 1wwl_A 203 LQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVL 279 (312)
T ss_dssp CCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEE
T ss_pred CCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEE
Confidence 99999999999842 23445678999999999999998764 45667899999999999999 6777666 899999
Q ss_pred ecccccCcCc
Q 008031 148 NVSYNNLSGP 157 (580)
Q Consensus 148 ~l~~n~l~~~ 157 (580)
|+++|++++.
T Consensus 280 ~Ls~N~l~~~ 289 (312)
T 1wwl_A 280 DLSYNRLDRN 289 (312)
T ss_dssp ECCSSCCCSC
T ss_pred ECCCCCCCCC
Confidence 9999999977
No 301
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.78 E-value=5e-19 Score=168.73 Aligned_cols=131 Identities=18% Similarity=0.278 Sum_probs=66.5
Q ss_pred CCcEEEccCCccCCCCCccccCCCCCCEEEeeCCc-CCCCCCccCcCCCCCCEEECcC-CCCCcccchhhhccCCCCeee
Q 008031 23 ELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNA-INGSLPASFSNLSSLVSLTLES-NNLDDQILDSLDKLHNLSVLN 100 (580)
Q Consensus 23 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~ 100 (580)
+|++|+|++|+|+++.+..|..+++|++|+|++|+ +++..+..|..+++|++|+|++ |+++...+..|..+++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555554444445555555555555554 4433333455555555555555 555544444455555555555
Q ss_pred eccccccccCCccccCCCCCc---EEEcccc-ccCCcccccccCcCCCC-eeecccccCc
Q 008031 101 LKRNQISGHIPSTIGNISTLT---ILDLSQN-KLSGEIPASFSNLKSLS-SFNVSYNNLS 155 (580)
Q Consensus 101 l~~N~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~~~~l~~l~~L~-~l~l~~n~l~ 155 (580)
+++|++++ +|. +..+++|+ +|++++| .+++..+..|..+++|+ .|++++|+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 55555553 333 44444444 5555555 55443334455555555 5555555554
No 302
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.78 E-value=4.5e-19 Score=194.00 Aligned_cols=157 Identities=24% Similarity=0.338 Sum_probs=131.1
Q ss_pred EecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCC
Q 008031 4 ALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLD 83 (580)
Q Consensus 4 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 83 (580)
+-++.+++ .+|..+. +++++|||++|.|+++.+..|..+++|++|+|++|+|++..+..|.+|++|++|+|++|+|+
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 44555677 6776553 47899999999999777788999999999999999998777778899999999999999998
Q ss_pred cccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCC-cccccccCcCCCCeeecccccCcCccChhh
Q 008031 84 DQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG-EIPASFSNLKSLSSFNVSYNNLSGPVPTSL 162 (580)
Q Consensus 84 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~l~~l~~L~~l~l~~n~l~~~~p~~~ 162 (580)
+..+..|..+++|++|+|++|++++..+..|+.+++|++|+|++|.+++ ..|..+..+++|+.|++++|++++..|..+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 8877888899999999999999987777778899999999999999876 357778889999999999999988777765
Q ss_pred h
Q 008031 163 A 163 (580)
Q Consensus 163 ~ 163 (580)
.
T Consensus 194 ~ 194 (635)
T 4g8a_A 194 R 194 (635)
T ss_dssp H
T ss_pred c
Confidence 4
No 303
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.78 E-value=5.4e-19 Score=192.41 Aligned_cols=155 Identities=25% Similarity=0.341 Sum_probs=85.4
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCC
Q 008031 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82 (580)
Q Consensus 3 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 82 (580)
++.+++.++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|.+
T Consensus 16 ~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp EECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred eEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 455555555 4444333 4555555555555555455555555555555555555544455555555555555555555
Q ss_pred CcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCC-cccccccCcCCCCeeecccccCcCccCh
Q 008031 83 DDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG-EIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 83 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
++..|..|..+++|++|+|++|.+++..+..++.+++|++|++++|.+++ .+|..|.++++|++|++++|++++..|.
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 55555555555555555555555554444555555555555555555553 3455555555555555555555554444
No 304
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=1.2e-18 Score=159.99 Aligned_cols=132 Identities=27% Similarity=0.389 Sum_probs=121.0
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCc-cccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPS-DLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
.+|++++|+|+ .+|..+.. +|++|+|++|.|+++.+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 46899999998 78876654 999999999999977664 589999999999999999988899999999999999999
Q ss_pred CCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCccc
Q 008031 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135 (580)
Q Consensus 80 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 135 (580)
|+|++..+..|..+++|+.|+|++|+|++..|..+..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999988889999999999999999999999999999999999999999997543
No 305
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.78 E-value=7e-19 Score=185.69 Aligned_cols=162 Identities=23% Similarity=0.245 Sum_probs=147.1
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..|..|.++++|++|+|++|.|+.+.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 59 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n 138 (477)
T 2id5_A 59 EELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN 138 (477)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCT
T ss_pred CEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCC
Confidence 47999999999888999999999999999999999777778899999999999999999888889999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
.++...+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|++++|++.+.+|.
T Consensus 139 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 218 (477)
T 2id5_A 139 DLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP 218 (477)
T ss_dssp TCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECT
T ss_pred ccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCc
Confidence 99998888999999999999999999977777789999999999999999987778899999999999999888766665
Q ss_pred hh
Q 008031 161 SL 162 (580)
Q Consensus 161 ~~ 162 (580)
..
T Consensus 219 ~~ 220 (477)
T 2id5_A 219 NC 220 (477)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 306
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.77 E-value=5.8e-19 Score=175.21 Aligned_cols=161 Identities=19% Similarity=0.183 Sum_probs=133.1
Q ss_pred CEEEecCCcccccccccc--cCCCCCcEEEccCCccCCCCC----ccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCE
Q 008031 1 MFLALQYNNLSGRIPASL--GKLSELQEISLSHNKISGVMP----SDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVS 74 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 74 (580)
++|+|++|.+++..|..+ .++++|++|+|++|.+++..+ ..+..+++|++|+|++|+|++..+..|..+++|++
T Consensus 94 ~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 173 (310)
T 4glp_A 94 KELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTS 173 (310)
T ss_dssp CEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCE
T ss_pred eEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCE
Confidence 479999999998888888 899999999999999997555 34457899999999999999888889999999999
Q ss_pred EECcCCCCCcc--c-c-hhhhccCCCCeeeeccccccccCCc----cccCCCCCcEEEccccccCCcccccccCc---CC
Q 008031 75 LTLESNNLDDQ--I-L-DSLDKLHNLSVLNLKRNQISGHIPS----TIGNISTLTILDLSQNKLSGEIPASFSNL---KS 143 (580)
Q Consensus 75 L~l~~N~l~~~--~-~-~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~~~~~~~l~~l---~~ 143 (580)
|+|++|++.+. . + ..+..+++|++|+|++|+++. ++. .+..+++|++|+|++|.+++..|..+..+ ++
T Consensus 174 L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~ 252 (310)
T 4glp_A 174 LDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSA 252 (310)
T ss_dssp EECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTT
T ss_pred EECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCc
Confidence 99999998653 2 1 224678899999999999973 333 25678999999999999998778777776 69
Q ss_pred CCeeecccccCcCccChhhh
Q 008031 144 LSSFNVSYNNLSGPVPTSLA 163 (580)
Q Consensus 144 L~~l~l~~n~l~~~~p~~~~ 163 (580)
|+.|++++|+++ .+|..+.
T Consensus 253 L~~L~Ls~N~l~-~lp~~~~ 271 (310)
T 4glp_A 253 LNSLNLSFAGLE-QVPKGLP 271 (310)
T ss_dssp CCCEECCSSCCC-SCCSCCC
T ss_pred CCEEECCCCCCC-chhhhhc
Confidence 999999999999 4565443
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.77 E-value=2.2e-18 Score=180.53 Aligned_cols=178 Identities=24% Similarity=0.241 Sum_probs=140.4
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCc----------------
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPA---------------- 64 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~---------------- 64 (580)
++|+|++|+|++..+..|.++++|++|+|++|.|+.+.+..|..+++|++|+|++|+|++..+.
T Consensus 102 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 181 (452)
T 3zyi_A 102 EVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL 181 (452)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC
T ss_pred CEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC
Confidence 3678888888877777788888888888888888866666677788888888888777643332
Q ss_pred ---------cCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCccc
Q 008031 65 ---------SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135 (580)
Q Consensus 65 ---------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 135 (580)
.|..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+++..+
T Consensus 182 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 259 (452)
T 3zyi_A 182 KKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIER 259 (452)
T ss_dssp TTCCEECTTTTTTCTTCCEEECTTSCCSSC--CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECT
T ss_pred CCccccChhhccCCCCCCEEECCCCccccc--ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECH
Confidence 356677888888888888764 357789999999999999999889999999999999999999998888
Q ss_pred ccccCcCCCCeeecccccCcCccChhhhh--hcCCCcccccccccCC
Q 008031 136 ASFSNLKSLSSFNVSYNNLSGPVPTSLAL--KFNASSFVGNIQLCGY 180 (580)
Q Consensus 136 ~~l~~l~~L~~l~l~~n~l~~~~p~~~~~--~~~~~~~~~~~~~~~~ 180 (580)
..|..+++|+.|+|++|+|++.++..+.. .+......+|+..|..
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred HHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 99999999999999999999776655431 2333444566666653
No 308
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=163.55 Aligned_cols=133 Identities=26% Similarity=0.314 Sum_probs=124.0
Q ss_pred CEEEecCCccccccc-ccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIP-ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|+|++|+|++..+ ..|.++++|+.|+|++|.|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 479999999997655 4589999999999999999988888999999999999999999988888899999999999999
Q ss_pred CCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCc
Q 008031 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGE 133 (580)
Q Consensus 80 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 133 (580)
|+|++..+..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|.++..
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 999999899999999999999999999988899999999999999999999864
No 309
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.77 E-value=2.1e-18 Score=187.10 Aligned_cols=161 Identities=23% Similarity=0.285 Sum_probs=110.4
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..+..|+++++|+.|+|++|.|++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 78 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N 157 (597)
T 3oja_B 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157 (597)
T ss_dssp SEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCC
Confidence 36777777777666667777777777777777777766777777777777777777777555555677777777777777
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCC-------------------------------------CCCcEE
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNI-------------------------------------STLTIL 123 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-------------------------------------~~L~~L 123 (580)
.+++..+..|..+++|+.|+|++|.+++.....+..+ ++|+.|
T Consensus 158 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L 237 (597)
T 3oja_B 158 NLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTIL 237 (597)
T ss_dssp CCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEE
T ss_pred cCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEE
Confidence 7777777777777777777777777765322221111 134444
Q ss_pred EccccccCCcccccccCcCCCCeeecccccCcCccChhhh
Q 008031 124 DLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPTSLA 163 (580)
Q Consensus 124 ~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~~~~ 163 (580)
+|++|.+++ +..+..+++|+.|++++|.+++.+|..+.
T Consensus 238 ~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 238 KLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp ECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred ECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 444444443 24567778888888888888877776654
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.77 E-value=2.2e-18 Score=179.89 Aligned_cols=177 Identities=26% Similarity=0.273 Sum_probs=151.2
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCC-cCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYN-AINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|+|++|+|+...+..|.++++|++|+|++|.|+.+.+..|..+++|+.|+|++| .++...+..|.++++|+.|+|++
T Consensus 115 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~ 194 (440)
T 3zyj_A 115 NTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAM 194 (440)
T ss_dssp CEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTT
T ss_pred CEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCC
Confidence 47999999999666678999999999999999999887889999999999999994 55545556799999999999999
Q ss_pred CCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 80 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
|+++.. | .+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++.++
T Consensus 195 n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 272 (440)
T 3zyj_A 195 CNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH 272 (440)
T ss_dssp SCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT
T ss_pred CcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh
Confidence 999764 3 47889999999999999998889999999999999999999998888999999999999999999997766
Q ss_pred hhhhh--hcCCCcccccccccC
Q 008031 160 TSLAL--KFNASSFVGNIQLCG 179 (580)
Q Consensus 160 ~~~~~--~~~~~~~~~~~~~~~ 179 (580)
..+.. .+......+|+..|+
T Consensus 273 ~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 273 DLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTTSSCTTCCEEECCSSCEECS
T ss_pred hHhccccCCCEEEcCCCCccCC
Confidence 55431 233334456666665
No 311
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.77 E-value=4.9e-19 Score=179.19 Aligned_cols=161 Identities=19% Similarity=0.170 Sum_probs=142.1
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCC-ccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLP-ASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~ 79 (580)
++|+|++|+|++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|++|++++..+ ..|..+++|+.|++++
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~ 158 (353)
T 2z80_A 79 QALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGN 158 (353)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEE
T ss_pred CEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCC
Confidence 479999999998788889999999999999999997666669999999999999999995444 4799999999999999
Q ss_pred C-CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCcc
Q 008031 80 N-NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPV 158 (580)
Q Consensus 80 N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~ 158 (580)
| .++...+..+..+++|+.|++++|++++..|..+..+++|++|++++|.++......+..+++|+.|++++|.+++..
T Consensus 159 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 159 MDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp SSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCC
T ss_pred CccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccc
Confidence 9 587777888999999999999999999888999999999999999999998544445567899999999999999765
Q ss_pred Chh
Q 008031 159 PTS 161 (580)
Q Consensus 159 p~~ 161 (580)
+..
T Consensus 239 ~~~ 241 (353)
T 2z80_A 239 FSE 241 (353)
T ss_dssp CC-
T ss_pred ccc
Confidence 543
No 312
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.77 E-value=2.3e-18 Score=188.39 Aligned_cols=162 Identities=28% Similarity=0.317 Sum_probs=144.9
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|||++|+|+...+..|.++++|++|||++|.|+++.++.|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 55 ~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N 134 (635)
T 4g8a_A 55 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 134 (635)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTS
T ss_pred CEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCC
Confidence 47999999999777789999999999999999999888889999999999999999999777778999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeecccccccc-CCccccCCCCCcEEEccccccCCcccccccCcCCCC----eeecccccCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGH-IPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLS----SFNVSYNNLS 155 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~----~l~l~~n~l~ 155 (580)
+|++..+..|..+++|++|+|++|.+++. .|..+..+++|++|+|++|++++..+..|..+.++. .++++.|.+.
T Consensus 135 ~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~ 214 (635)
T 4g8a_A 135 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 214 (635)
T ss_dssp CCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred cCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc
Confidence 99988888899999999999999999764 577889999999999999999988888887776554 6889999998
Q ss_pred CccChhh
Q 008031 156 GPVPTSL 162 (580)
Q Consensus 156 ~~~p~~~ 162 (580)
...+..+
T Consensus 215 ~i~~~~~ 221 (635)
T 4g8a_A 215 FIQPGAF 221 (635)
T ss_dssp EECTTTT
T ss_pred ccCcccc
Confidence 7665543
No 313
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.77 E-value=3.5e-18 Score=171.34 Aligned_cols=153 Identities=25% Similarity=0.400 Sum_probs=111.0
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|+++ .+|..+. ++|++|++++|
T Consensus 57 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n 133 (332)
T 2ft3_A 57 TLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDN 133 (332)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSS
T ss_pred eEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCC
Confidence 46889999998766778899999999999999998777888888999999999999988 5555544 78888888888
Q ss_pred CCCcccchhhhccCCCCeeeeccccccc--cCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCcc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISG--HIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPV 158 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~ 158 (580)
.++...+..+..+++|+.|++++|.++. ..+..+..+ +|++|++++|.+++ +|..+. ++|+.|++++|.+++..
T Consensus 134 ~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 134 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCC
T ss_pred ccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccC
Confidence 8887777778888888888888888853 555556555 55555555555553 332222 45555555555555444
Q ss_pred Ch
Q 008031 159 PT 160 (580)
Q Consensus 159 p~ 160 (580)
+.
T Consensus 210 ~~ 211 (332)
T 2ft3_A 210 LE 211 (332)
T ss_dssp TT
T ss_pred HH
Confidence 33
No 314
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.76 E-value=3.6e-18 Score=175.33 Aligned_cols=160 Identities=23% Similarity=0.290 Sum_probs=101.6
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|.|++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++|.
T Consensus 73 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCc
Confidence 56777777775555567777777777777777776666666777777777777777764433445667777777777777
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCC-------------------------------------CCCcEEE
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNI-------------------------------------STLTILD 124 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-------------------------------------~~L~~L~ 124 (580)
+++..+..+..+++|+.|++++|++++.....+..+ ++|+.|+
T Consensus 153 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~ 232 (390)
T 3o6n_A 153 LERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILK 232 (390)
T ss_dssp CCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEE
T ss_pred cCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEE
Confidence 766666666667777777777776654321111111 2344444
Q ss_pred ccccccCCcccccccCcCCCCeeecccccCcCccChhhh
Q 008031 125 LSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPTSLA 163 (580)
Q Consensus 125 l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~~~~ 163 (580)
+++|.+++. ..+..+++|+.|++++|.+++..|..+.
T Consensus 233 l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 233 LQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred CCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 444444432 3466778888888888888877666553
No 315
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.76 E-value=2.2e-18 Score=190.25 Aligned_cols=163 Identities=25% Similarity=0.294 Sum_probs=135.1
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 28 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n 107 (680)
T 1ziw_A 28 TVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSN 107 (680)
T ss_dssp SEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred cEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCC
Confidence 46888889888766677888889999999999888888888888889999999999888555557888889999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCccccccc--CcCCCCeeecccccCcCcc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFS--NLKSLSSFNVSYNNLSGPV 158 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~--~l~~L~~l~l~~n~l~~~~ 158 (580)
++++..+..|..+++|++|+|++|.+++..+..+..+++|++|++++|.+++..+..+. .+++|+.|++++|++++..
T Consensus 108 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 187 (680)
T 1ziw_A 108 SIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFS 187 (680)
T ss_dssp CCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBC
T ss_pred ccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccC
Confidence 88887778888888999999999988888888888888899999999988876666554 4578888999988888777
Q ss_pred Chhhh
Q 008031 159 PTSLA 163 (580)
Q Consensus 159 p~~~~ 163 (580)
|..+.
T Consensus 188 ~~~~~ 192 (680)
T 1ziw_A 188 PGCFH 192 (680)
T ss_dssp TTGGG
T ss_pred hhhhh
Confidence 76543
No 316
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.76 E-value=5.1e-18 Score=174.20 Aligned_cols=86 Identities=22% Similarity=0.247 Sum_probs=74.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..|..|.++++|++|+|++|.++.+.+..|..+++|++|+|++|++++..+..|..+++|+.|++++|
T Consensus 96 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 175 (390)
T 3o6n_A 96 QKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175 (390)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSS
T ss_pred CEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCC
Confidence 47899999999777788999999999999999999665566788999999999999999777888899999999999999
Q ss_pred CCCccc
Q 008031 81 NLDDQI 86 (580)
Q Consensus 81 ~l~~~~ 86 (580)
.++...
T Consensus 176 ~l~~~~ 181 (390)
T 3o6n_A 176 RLTHVD 181 (390)
T ss_dssp CCSBCC
T ss_pred cCCccc
Confidence 887643
No 317
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.76 E-value=5e-18 Score=184.08 Aligned_cols=86 Identities=22% Similarity=0.247 Sum_probs=76.7
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..|..|+++++|++|+|++|.|+++.+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 102 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 181 (597)
T 3oja_B 102 QKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 181 (597)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCC
Confidence 47999999999877888899999999999999999776767899999999999999999888888999999999999999
Q ss_pred CCCccc
Q 008031 81 NLDDQI 86 (580)
Q Consensus 81 ~l~~~~ 86 (580)
.+++..
T Consensus 182 ~l~~~~ 187 (597)
T 3oja_B 182 RLTHVD 187 (597)
T ss_dssp CCSBCC
T ss_pred CCCCcC
Confidence 987653
No 318
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.76 E-value=5.9e-18 Score=167.62 Aligned_cols=146 Identities=27% Similarity=0.446 Sum_probs=94.2
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|++++|.|+ .++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|+|++ ++ .+..+++|+.|+|++|+
T Consensus 45 ~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~ 118 (308)
T 1h6u_A 45 TLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQ 118 (308)
T ss_dssp EEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSC
T ss_pred EEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCC
Confidence 5677777776 333 46667777777777777764333 6677777777777777763 23 46667777777777777
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
+++.. .+..+++|+.|++++|++++..+ +..+++|++|+|++|.+++..+ +..+++|+.|++++|++++..+
T Consensus 119 l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 119 ITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh
Confidence 76533 26666777777777777764332 6666777777777777664322 6666677777777776665443
No 319
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=5.6e-18 Score=160.13 Aligned_cols=132 Identities=25% Similarity=0.339 Sum_probs=121.7
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|++|+|++|.|+.+.+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 43 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N 122 (229)
T 3e6j_A 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCN 122 (229)
T ss_dssp SEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCC
Confidence 47999999999888999999999999999999999777778899999999999999999777777899999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGE 133 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 133 (580)
+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|.+...
T Consensus 123 ~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 123 KLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred ccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 997 5678889999999999999999977777899999999999999999854
No 320
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.76 E-value=2.9e-18 Score=171.96 Aligned_cols=158 Identities=28% Similarity=0.378 Sum_probs=99.4
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCC--CCCccCcCC---------
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING--SLPASFSNL--------- 69 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l--------- 69 (580)
++|+|++|+|+ .+|..+. ++|++|++++|.+++..+..|..+++|++|++++|.++. ..+..+..+
T Consensus 105 ~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~ 181 (332)
T 2ft3_A 105 QKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISE 181 (332)
T ss_dssp CEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCS
T ss_pred CEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcC
Confidence 35677777776 4554444 567777777777765555556667777777777776642 444444444
Q ss_pred -----------CCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccc
Q 008031 70 -----------SSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASF 138 (580)
Q Consensus 70 -----------~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l 138 (580)
++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|.++ .+|..+
T Consensus 182 n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 182 AKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp SBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred CCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 35666666666666555566666666666666666666655556666666677777766666 556666
Q ss_pred cCcCCCCeeecccccCcCccChhh
Q 008031 139 SNLKSLSSFNVSYNNLSGPVPTSL 162 (580)
Q Consensus 139 ~~l~~L~~l~l~~n~l~~~~p~~~ 162 (580)
..+++|+.|++++|++++..+..+
T Consensus 261 ~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp GGCTTCCEEECCSSCCCBCCTTSS
T ss_pred hcCccCCEEECCCCCCCccChhHc
Confidence 666666677777666665544433
No 321
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.76 E-value=1.7e-18 Score=186.95 Aligned_cols=160 Identities=29% Similarity=0.315 Sum_probs=100.6
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|+|++..+..|.++++|++|+|++|.++++.+..|..+++|++|+|++|++++..|..|.++++|++|++++|+
T Consensus 32 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 111 (570)
T 2z63_A 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 111 (570)
T ss_dssp EEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccc
Confidence 56666666665555566666666666666666665555566666666666666666665555666666666666666666
Q ss_pred CCcccchhhhccCCCCeeeecccccccc-CCccccCCCCCcEEEccccccCCcccccccCcCCC----CeeecccccCcC
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGH-IPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSL----SSFNVSYNNLSG 156 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L----~~l~l~~n~l~~ 156 (580)
++...+..+..+++|++|++++|.+++. +|..+..+++|++|++++|.+++..+..+..+++| ..|++++|.+++
T Consensus 112 l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~ 191 (570)
T 2z63_A 112 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF 191 (570)
T ss_dssp CCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE
T ss_pred cccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCcee
Confidence 6655544566666666666666666542 45666666666666666666665555556666665 566666666665
Q ss_pred ccChh
Q 008031 157 PVPTS 161 (580)
Q Consensus 157 ~~p~~ 161 (580)
..|..
T Consensus 192 ~~~~~ 196 (570)
T 2z63_A 192 IQPGA 196 (570)
T ss_dssp ECTTT
T ss_pred cCHHH
Confidence 55543
No 322
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.76 E-value=8.6e-18 Score=168.37 Aligned_cols=156 Identities=22% Similarity=0.368 Sum_probs=113.9
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+|+ .+|..+. ++|++|++++|
T Consensus 55 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n 131 (330)
T 1xku_A 55 ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHEN 131 (330)
T ss_dssp CEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSS
T ss_pred eEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCC
Confidence 46888999988666668888999999999999988777888888899999999998888 5555443 67888888888
Q ss_pred CCCcccchhhhccCCCCeeeeccccccc--cCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCcc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISG--HIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPV 158 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~ 158 (580)
.+++..+..+..+++|+.|++++|.++. ..+..+..+++|++|++++|.++. +|..+. ++|+.|++++|++++..
T Consensus 132 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 132 EITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVD 208 (330)
T ss_dssp CCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEEC
T ss_pred cccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccC
Confidence 8877777777777778888888777753 556667777777777777776663 333332 56666666666666554
Q ss_pred Chhh
Q 008031 159 PTSL 162 (580)
Q Consensus 159 p~~~ 162 (580)
|..+
T Consensus 209 ~~~~ 212 (330)
T 1xku_A 209 AASL 212 (330)
T ss_dssp TGGG
T ss_pred HHHh
Confidence 4433
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.76 E-value=1.3e-18 Score=183.40 Aligned_cols=156 Identities=25% Similarity=0.201 Sum_probs=126.9
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCc----------------
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPA---------------- 64 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~---------------- 64 (580)
++|+|++|.|++..|..|.++++|+.|+|++|.|++..| |..+++|++|+|++|.|++..+.
T Consensus 37 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~ 114 (487)
T 3oja_A 37 KELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRV 114 (487)
T ss_dssp CEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCE
T ss_pred cEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCC
Confidence 478999999998778899999999999999999986554 88888888888888877632211
Q ss_pred cCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCcccc-CCCCCcEEEccccccCCcccccccCcCC
Q 008031 65 SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIG-NISTLTILDLSQNKLSGEIPASFSNLKS 143 (580)
Q Consensus 65 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 143 (580)
....+++|+.|+|++|.|++..+..+..+++|+.|+|++|.+++..|..+. .+++|++|+|++|.+++.. .+..+++
T Consensus 115 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~ 192 (487)
T 3oja_A 115 SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAK 192 (487)
T ss_dssp EECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTT
T ss_pred CccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc--ccccCCC
Confidence 012357788999999999888888888999999999999999988887776 7899999999999998652 2446889
Q ss_pred CCeeecccccCcCccCh
Q 008031 144 LSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 144 L~~l~l~~n~l~~~~p~ 160 (580)
|+.|+|++|.+++.+|.
T Consensus 193 L~~L~Ls~N~l~~~~~~ 209 (487)
T 3oja_A 193 LKTLDLSSNKLAFMGPE 209 (487)
T ss_dssp CCEEECCSSCCCEECGG
T ss_pred CCEEECCCCCCCCCCHh
Confidence 99999999999976664
No 324
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.76 E-value=2.4e-18 Score=170.77 Aligned_cols=154 Identities=18% Similarity=0.183 Sum_probs=130.5
Q ss_pred CEEEecCCccccccc----ccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCC--C--CccCcCCCCC
Q 008031 1 MFLALQYNNLSGRIP----ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS--L--PASFSNLSSL 72 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~--~~~~~~l~~L 72 (580)
++|+|++|.|++..+ ..+..+++|++|+|++|.+++..+..|..+++|++|+|++|++.+. + +..+..+++|
T Consensus 120 ~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L 199 (310)
T 4glp_A 120 SSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAI 199 (310)
T ss_dssp SSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCC
T ss_pred CEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCC
Confidence 468999999997554 4556899999999999999988889999999999999999998642 2 2345789999
Q ss_pred CEEECcCCCCCcccch---hhhccCCCCeeeeccccccccCCccccCC---CCCcEEEccccccCCcccccccCcCCCCe
Q 008031 73 VSLTLESNNLDDQILD---SLDKLHNLSVLNLKRNQISGHIPSTIGNI---STLTILDLSQNKLSGEIPASFSNLKSLSS 146 (580)
Q Consensus 73 ~~L~l~~N~l~~~~~~---~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~L~l~~N~l~~~~~~~l~~l~~L~~ 146 (580)
++|+|++|+++..... .+..+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.
T Consensus 200 ~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~ 276 (310)
T 4glp_A 200 QNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRV 276 (310)
T ss_dssp CSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSC
T ss_pred CEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCE
Confidence 9999999999753322 35788999999999999998878877777 69999999999999 6677664 89999
Q ss_pred eecccccCcCc
Q 008031 147 FNVSYNNLSGP 157 (580)
Q Consensus 147 l~l~~n~l~~~ 157 (580)
|++++|++++.
T Consensus 277 L~Ls~N~l~~~ 287 (310)
T 4glp_A 277 LDLSSNRLNRA 287 (310)
T ss_dssp EECCSCCCCSC
T ss_pred EECCCCcCCCC
Confidence 99999999974
No 325
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.76 E-value=3.8e-18 Score=186.12 Aligned_cols=145 Identities=26% Similarity=0.312 Sum_probs=64.7
Q ss_pred EEEecCCcccccccccccCCC--CCcEEEccCCccCCCCCcccc-------CCCCCCEEEeeCCcCCCCCCccCcCCCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLS--ELQEISLSHNKISGVMPSDLG-------RLSRLRILDFSYNAINGSLPASFSNLSSL 72 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 72 (580)
+|+|++|.|+ .+|..+..+. +|+.|+|++|.+++..|..|. .+++|++|+|++|+|++..+..+..+++|
T Consensus 381 ~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L 459 (636)
T 4eco_A 381 NLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPL 459 (636)
T ss_dssp EEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCC
T ss_pred EEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCC
Confidence 4555555555 4444444433 455555555555544444444 44445555555555542222223334444
Q ss_pred CEEECcCCCCCcccchhhhcc-------CCCCeeeeccccccccCCcccc--CCCCCcEEEccccccCCcccccccCcCC
Q 008031 73 VSLTLESNNLDDQILDSLDKL-------HNLSVLNLKRNQISGHIPSTIG--NISTLTILDLSQNKLSGEIPASFSNLKS 143 (580)
Q Consensus 73 ~~L~l~~N~l~~~~~~~~~~l-------~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 143 (580)
+.|+|++|+++.+.+..+..+ ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++
T Consensus 460 ~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~ 537 (636)
T 4eco_A 460 SSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSST 537 (636)
T ss_dssp SEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSS
T ss_pred CEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCC
Confidence 444444444442222222211 14444444444444 3333333 44444444444444443 4444444444
Q ss_pred CCeeec
Q 008031 144 LSSFNV 149 (580)
Q Consensus 144 L~~l~l 149 (580)
|+.|++
T Consensus 538 L~~L~L 543 (636)
T 4eco_A 538 LKGFGI 543 (636)
T ss_dssp CCEEEC
T ss_pred CCEEEC
Confidence 444444
No 326
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=6.1e-19 Score=196.30 Aligned_cols=156 Identities=26% Similarity=0.386 Sum_probs=117.2
Q ss_pred EEEecCCcccccccccccCCCCCcEEEc-cCCccCCC-------------------------------------------
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISL-SHNKISGV------------------------------------------- 37 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l-~~n~l~~~------------------------------------------- 37 (580)
.|+|++|.|.|.+|+.|++|++|+.|+| ++|.+.+.
T Consensus 327 ~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~ 406 (876)
T 4ecn_A 327 GLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQD 406 (876)
T ss_dssp EEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHH
Confidence 5788888888888888888888888888 66644322
Q ss_pred ---------------------------------CCccccCCCCCCEEEeeCCcCCC-----------------CCCccCc
Q 008031 38 ---------------------------------MPSDLGRLSRLRILDFSYNAING-----------------SLPASFS 67 (580)
Q Consensus 38 ---------------------------------~~~~~~~l~~L~~L~l~~n~l~~-----------------~~~~~~~ 67 (580)
+|..|..+++|+.|+|++|+|++ .+|..+.
T Consensus 407 ~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~ 486 (876)
T 4ecn_A 407 AINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELS 486 (876)
T ss_dssp HHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCC
T ss_pred HhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhh
Confidence 56677778888888888888876 2677766
Q ss_pred --CCCCCCEEECcCCCCCcccchhhhccCCCCeeeecccc-ccc-cCCccccCCC-------CCcEEEccccccCCcccc
Q 008031 68 --NLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQ-ISG-HIPSTIGNIS-------TLTILDLSQNKLSGEIPA 136 (580)
Q Consensus 68 --~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~-~~~~~~~~l~-------~L~~L~l~~N~l~~~~~~ 136 (580)
++++|+.|+|++|++.+.+|..|..+++|+.|+|++|+ +++ .+|..++.++ +|++|+|++|.++ .+|.
T Consensus 487 f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 487 WSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp GGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred hccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 78888888888888777777778888888888888887 776 5666555544 7888888888877 6776
Q ss_pred --cccCcCCCCeeecccccCcCccC
Q 008031 137 --SFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 137 --~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
.|..+++|+.|++++|+++ .+|
T Consensus 566 ~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 566 SASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp HHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred hhhhhcCCCCCEEECCCCCcc-cch
Confidence 7777888888888888777 555
No 327
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.75 E-value=3.1e-18 Score=184.98 Aligned_cols=161 Identities=26% Similarity=0.334 Sum_probs=128.6
Q ss_pred CEEEecCCcccccc--cccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCC-ccCcCCCCCCEEEC
Q 008031 1 MFLALQYNNLSGRI--PASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLP-ASFSNLSSLVSLTL 77 (580)
Q Consensus 1 ~~L~L~~N~i~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l 77 (580)
++|+|++|++++.. +..+.++++|+.|++++|.+++..+ .+..+++|+.|++++|++++..+ ..+..+++|++|++
T Consensus 350 ~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 428 (570)
T 2z63_A 350 EFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428 (570)
T ss_dssp CEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEEC
T ss_pred CEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeC
Confidence 46888888888543 6778888888888888888885443 48888888888888888876555 46788888888888
Q ss_pred cCCCCCcccchhhhccCCCCeeeecccccc-ccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcC
Q 008031 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQIS-GHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSG 156 (580)
Q Consensus 78 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~ 156 (580)
++|.+++..+..+..+++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++..|..|..+++|+.|++++|++++
T Consensus 429 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 508 (570)
T 2z63_A 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508 (570)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCC
Confidence 888888777888888888888888888886 4677788888888888888888887778888888888888888888887
Q ss_pred ccChhh
Q 008031 157 PVPTSL 162 (580)
Q Consensus 157 ~~p~~~ 162 (580)
.+|..+
T Consensus 509 ~~~~~~ 514 (570)
T 2z63_A 509 VPDGIF 514 (570)
T ss_dssp CCTTTT
T ss_pred CCHHHh
Confidence 766544
No 328
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=1.1e-17 Score=164.10 Aligned_cols=145 Identities=26% Similarity=0.428 Sum_probs=126.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|++++|.|+. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++ ++ .+..+++|+.|+|++|
T Consensus 49 ~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n 122 (291)
T 1h6t_A 49 DQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHN 122 (291)
T ss_dssp CEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTS
T ss_pred cEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCC
Confidence 478999999984 44 58999999999999999996544 8999999999999999984 44 4899999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
++++. ..+..+++|+.|++++|++++. ..+..+++|++|+|++|.+++..+ +..+++|+.|++++|++++.
T Consensus 123 ~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 123 GISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp CCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC
Confidence 99874 5688899999999999999865 578899999999999999997555 89999999999999999864
No 329
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.75 E-value=6.7e-18 Score=181.91 Aligned_cols=156 Identities=26% Similarity=0.385 Sum_probs=127.7
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCC--CccccCCCCCCEEEeeCCcCCCCCC-ccCcCCCCCCEEEC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVM--PSDLGRLSRLRILDFSYNAINGSLP-ASFSNLSSLVSLTL 77 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l 77 (580)
++|+|++|+|++.+|..+.++++|++|+|++|.+++.. |..|..+++|+.|+|++|++++.+| ..+..+++|+.|+|
T Consensus 356 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l 435 (562)
T 3a79_B 356 TFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNL 435 (562)
T ss_dssp CEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEEC
T ss_pred eEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEEC
Confidence 46888999998878888889999999999999988533 4568888999999999999986455 45788889999999
Q ss_pred cCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCccccc-ccCcCCCCeeecccccCcC
Q 008031 78 ESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPAS-FSNLKSLSSFNVSYNNLSG 156 (580)
Q Consensus 78 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-l~~l~~L~~l~l~~n~l~~ 156 (580)
++|++++..+..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|++++ +|.. +..+++|+.|++++|++.+
T Consensus 436 ~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 436 SSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp CSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCC
Confidence 99998876665543 68999999999998 667767789999999999999984 5544 8889999999999999987
Q ss_pred ccCh
Q 008031 157 PVPT 160 (580)
Q Consensus 157 ~~p~ 160 (580)
..+.
T Consensus 512 ~c~~ 515 (562)
T 3a79_B 512 TCPG 515 (562)
T ss_dssp CHHH
T ss_pred Ccch
Confidence 6664
No 330
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.74 E-value=5.7e-18 Score=180.80 Aligned_cols=149 Identities=21% Similarity=0.326 Sum_probs=73.8
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCC--CCCccCcCCCCCCEEECcC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAING--SLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~ 79 (580)
.|++++|.+.+.. .+..+++|++|+|++|.+++..|..+..+++|++|+|++|+|++ .+|..+..+++|+.|+|++
T Consensus 306 ~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~ 383 (520)
T 2z7x_B 306 NFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQ 383 (520)
T ss_dssp EEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCS
T ss_pred EEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCC
Confidence 3555555554211 11345555555555555554455555555555555555555553 2334455555555555555
Q ss_pred CCCCcccc-hhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCc
Q 008031 80 NNLDDQIL-DSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLS 155 (580)
Q Consensus 80 N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~ 155 (580)
|.+++.+| ..+..+++|+.|++++|++++..|..+. ++|++|+|++|+++ .+|..+..+++|+.|++++|+++
T Consensus 384 N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 384 NSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp SCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred CcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 55544222 2344455555555555555444443332 45555555555555 44444445555555555555555
No 331
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.74 E-value=4.6e-18 Score=191.76 Aligned_cols=160 Identities=28% Similarity=0.356 Sum_probs=120.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCC-CccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVM-PSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|||++|.|++..+..|.++++|++|+|++|.+.+.+ |..|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 27 ~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 106 (844)
T 3j0a_A 27 ERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYF 106 (844)
T ss_dssp CEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTT
T ss_pred CEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcC
Confidence 36788888888777778888888888888888544333 67788888888888888888877778888888888888888
Q ss_pred CCCCcccchh--hhccCCCCeeeeccccccccCC-ccccCCCCCcEEEccccccCCcccccccCc--CCCCeeecccccC
Q 008031 80 NNLDDQILDS--LDKLHNLSVLNLKRNQISGHIP-STIGNISTLTILDLSQNKLSGEIPASFSNL--KSLSSFNVSYNNL 154 (580)
Q Consensus 80 N~l~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l--~~L~~l~l~~n~l 154 (580)
|.+++..+.. +..+++|++|+|++|.+++..+ ..++++++|++|+|++|.+++..+..+..+ ++|+.|++++|.+
T Consensus 107 n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l 186 (844)
T 3j0a_A 107 CGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186 (844)
T ss_dssp CCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBS
T ss_pred CCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCcc
Confidence 8887655544 7778888888888888876544 467788888888888888877777777666 6777777777777
Q ss_pred cCccCh
Q 008031 155 SGPVPT 160 (580)
Q Consensus 155 ~~~~p~ 160 (580)
.+..|.
T Consensus 187 ~~~~~~ 192 (844)
T 3j0a_A 187 YSRVSV 192 (844)
T ss_dssp CCCCCC
T ss_pred cccccc
Confidence 665554
No 332
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.8e-18 Score=192.44 Aligned_cols=157 Identities=24% Similarity=0.386 Sum_probs=142.6
Q ss_pred CEEEecCCcccc-----------------ccccccc--CCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCc-CCC
Q 008031 1 MFLALQYNNLSG-----------------RIPASLG--KLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNA-ING 60 (580)
Q Consensus 1 ~~L~L~~N~i~~-----------------~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~ 60 (580)
++|+|++|+|++ .+|..++ ++++|+.|+|++|.+.+.+|..|..+++|+.|+|++|+ +++
T Consensus 451 ~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg 530 (876)
T 4ecn_A 451 QIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISA 530 (876)
T ss_dssp CEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCH
T ss_pred CEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCccc
Confidence 479999999997 3899988 99999999999999999999999999999999999998 887
Q ss_pred -CCCccCcCC-------CCCCEEECcCCCCCcccch--hhhccCCCCeeeeccccccccCCccccCCCCCcEEEcccccc
Q 008031 61 -SLPASFSNL-------SSLVSLTLESNNLDDQILD--SLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKL 130 (580)
Q Consensus 61 -~~~~~~~~l-------~~L~~L~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 130 (580)
.+|..+..+ ++|+.|+|++|+++ .+|. .+..+++|+.|+|++|+++ .+| .+..+++|+.|+|++|.+
T Consensus 531 ~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l 607 (876)
T 4ecn_A 531 AQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQI 607 (876)
T ss_dssp HHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCC
T ss_pred ccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcc
Confidence 678765554 59999999999998 6777 8999999999999999999 777 899999999999999999
Q ss_pred CCcccccccCcCC-CCeeecccccCcCccChhh
Q 008031 131 SGEIPASFSNLKS-LSSFNVSYNNLSGPVPTSL 162 (580)
Q Consensus 131 ~~~~~~~l~~l~~-L~~l~l~~n~l~~~~p~~~ 162 (580)
+ .+|..+..+++ |+.|++++|+++ .+|..+
T Consensus 608 ~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~ 638 (876)
T 4ecn_A 608 E-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIF 638 (876)
T ss_dssp S-CCCTTSCEECTTCCEEECCSSCCC-SCCSCC
T ss_pred c-cchHHHhhccccCCEEECcCCCCC-cCchhh
Confidence 9 88989999999 999999999999 566543
No 333
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.74 E-value=2.1e-17 Score=163.59 Aligned_cols=147 Identities=29% Similarity=0.454 Sum_probs=128.0
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++ +++ +.++++|++|+|++|.+++. + .+..+++|++|+|++|+|++ ++. +..+++|+.|+|++|
T Consensus 66 ~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n 139 (308)
T 1h6u_A 66 IGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLN 139 (308)
T ss_dssp CEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSS
T ss_pred CEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCC
Confidence 479999999995 444 99999999999999999854 3 68899999999999999995 443 899999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|.+++..+ +..+++|+.|++++|++++..|
T Consensus 140 ~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~ 212 (308)
T 1h6u_A 140 QITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP 212 (308)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG
T ss_pred ccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc
Confidence 9987654 8899999999999999996444 8899999999999999986544 8899999999999999997664
No 334
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.74 E-value=7.4e-18 Score=181.59 Aligned_cols=138 Identities=23% Similarity=0.335 Sum_probs=107.4
Q ss_pred cCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCC--CCccCcCCCCCCEEECcCCCCCc-ccchhhhccCC
Q 008031 19 GKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGS--LPASFSNLSSLVSLTLESNNLDD-QILDSLDKLHN 95 (580)
Q Consensus 19 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~ 95 (580)
..+++|++|+|++|.+++..|..+..+++|++|+|++|+|++. +|..|..+++|+.|+|++|.+++ ..+..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 6677888888888888877788888888888888888888852 24567888888888888888877 44445777888
Q ss_pred CCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 96 LSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 96 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
|+.|++++|++++..+..+. ++|++|+|++|+++ .+|..+..+++|+.|++++|++++.++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~ 490 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPD 490 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCT
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCH
Confidence 88888888888776665543 68888888888888 567666688888888888888885433
No 335
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=1.5e-17 Score=163.29 Aligned_cols=145 Identities=30% Similarity=0.423 Sum_probs=128.8
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++..+ +.++++|+.|+|++|.+++ ++ .+..+++|++|+|++|+|++. ..+..+++|+.|+|++|
T Consensus 71 ~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n 144 (291)
T 1h6t_A 71 TKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNN 144 (291)
T ss_dssp CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSS
T ss_pred CEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCC
Confidence 479999999995444 9999999999999999985 33 599999999999999999954 46889999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
++++. ..+..+++|+.|++++|++++..+ +..+++|+.|+|++|.+++ ++ .+..+++|+.|++++|+++..
T Consensus 145 ~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 145 KITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred cCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 99875 678999999999999999996655 8999999999999999985 44 489999999999999999853
No 336
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.74 E-value=8.2e-18 Score=179.53 Aligned_cols=158 Identities=20% Similarity=0.317 Sum_probs=120.5
Q ss_pred CEEEecCCcccccccccc-----cCCCCCcEEEccCCccCCCCC-c-------------------------cccCCCCCC
Q 008031 1 MFLALQYNNLSGRIPASL-----GKLSELQEISLSHNKISGVMP-S-------------------------DLGRLSRLR 49 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~-~-------------------------~~~~l~~L~ 49 (580)
++|+|++|++++.+|..+ .++++|+.++++.|.+ .+| . .+..+++|+
T Consensus 250 ~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~ 327 (520)
T 2z7x_B 250 WYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFL 327 (520)
T ss_dssp SEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCccc
Confidence 367888888887788777 6666666666655555 122 1 126788899
Q ss_pred EEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCc--ccchhhhccCCCCeeeeccccccccCCc-cccCCCCCcEEEcc
Q 008031 50 ILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDD--QILDSLDKLHNLSVLNLKRNQISGHIPS-TIGNISTLTILDLS 126 (580)
Q Consensus 50 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~l~ 126 (580)
+|+|++|++++..|..+..+++|++|+|++|++++ ..|..+..+++|+.|++++|++++.+|. .+..+++|++|+++
T Consensus 328 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls 407 (520)
T 2z7x_B 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMS 407 (520)
T ss_dssp EEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECC
T ss_pred EEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECc
Confidence 99999999988788888889999999999999986 4456788889999999999999874554 47788899999999
Q ss_pred ccccCCcccccccCcCCCCeeecccccCcCccChhhh
Q 008031 127 QNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPTSLA 163 (580)
Q Consensus 127 ~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~~~~ 163 (580)
+|.+++..+..+. ++|+.|++++|+++ .+|..+.
T Consensus 408 ~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 408 SNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp SSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred CCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 9998876666554 68889999999988 5565443
No 337
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.7e-17 Score=160.17 Aligned_cols=143 Identities=27% Similarity=0.461 Sum_probs=78.9
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|+|+ .++ .+..+++|+.|+|++|.|++..+ +..+++|+.|+|++|+|++ +|. +.. ++|+.|+|++|+
T Consensus 45 ~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~ 117 (263)
T 1xeu_A 45 NFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNE 117 (263)
T ss_dssp EEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSC
T ss_pred EEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCc
Confidence 4556666665 333 45556666666666666654322 5556666666666666653 232 222 556666666666
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
|++. ..+..+++|+.|+|++|++++. + .+..+++|++|+|++|.+++. ..+..+++|+.|++++|++++.
T Consensus 118 l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 118 LRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred cCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 6543 2355566666666666666543 2 455566666666666666543 4455566666666666665543
No 338
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.73 E-value=3.6e-18 Score=183.58 Aligned_cols=154 Identities=20% Similarity=0.255 Sum_probs=90.2
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|.
T Consensus 30 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 109 (549)
T 2z81_A 30 SLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNP 109 (549)
T ss_dssp EEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCC
T ss_pred EEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCc
Confidence 45666666665555556666666666666666665555556666666666666666665444446666666666666666
Q ss_pred CCcc-cchhhhccCCCCeeeecccc-ccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCc
Q 008031 82 LDDQ-ILDSLDKLHNLSVLNLKRNQ-ISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLS 155 (580)
Q Consensus 82 l~~~-~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~ 155 (580)
+++. .+..+..+++|++|++++|. +....+..+..+++|++|++++|.+++..|..+..+++|+.|+++.|.+.
T Consensus 110 l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 110 YQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp CSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred ccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 6542 33455556666666666665 33222345556666666666666666555556666666666666666554
No 339
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=1.2e-17 Score=149.80 Aligned_cols=137 Identities=19% Similarity=0.218 Sum_probs=121.7
Q ss_pred cCCCCCcEEEccCCccC-CCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCC
Q 008031 19 GKLSELQEISLSHNKIS-GVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLS 97 (580)
Q Consensus 19 ~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 97 (580)
...++|++|+|++|.++ +.+|..+..+++|++|+|++|+|++. ..|..+++|+.|+|++|.+++..|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34578999999999998 67788889999999999999999955 7899999999999999999888888888899999
Q ss_pred eeeeccccccccCC-ccccCCCCCcEEEccccccCCccc---ccccCcCCCCeeecccccCcCc
Q 008031 98 VLNLKRNQISGHIP-STIGNISTLTILDLSQNKLSGEIP---ASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 98 ~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~---~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
.|+|++|++++... ..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|.+...
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 99999999996432 678999999999999999996555 4789999999999999998743
No 340
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=3.3e-17 Score=150.27 Aligned_cols=131 Identities=22% Similarity=0.316 Sum_probs=107.5
Q ss_pred cEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccc
Q 008031 25 QEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRN 104 (580)
Q Consensus 25 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 104 (580)
+.+++++|.|+ .+|..+. ++|+.|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 67888888888 4555443 58888888888888 67778888888888888888888877778888888888888888
Q ss_pred cccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 105 QISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 105 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
+|++..+..|..+++|++|+|++|.++...+..|..+++|+.|++++|++.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 8887777788888999999999999986666678889999999999999875443
No 341
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.72 E-value=5.7e-18 Score=168.56 Aligned_cols=155 Identities=25% Similarity=0.206 Sum_probs=104.6
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCc----------------
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPA---------------- 64 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~---------------- 64 (580)
++|+|++|+|++..|..|.++++|+.|+|++|.+++..+ +..+++|++|+|++|+|++..+.
T Consensus 37 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~ 114 (317)
T 3o53_A 37 KELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRV 114 (317)
T ss_dssp SEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEE
T ss_pred CEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCc
Confidence 478999999997777889999999999999999886544 88888888888888887732110
Q ss_pred cCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCcccc-CCCCCcEEEccccccCCcccccccCcCC
Q 008031 65 SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIG-NISTLTILDLSQNKLSGEIPASFSNLKS 143 (580)
Q Consensus 65 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 143 (580)
....+++|+.|++++|++++..+..+..+++|+.|+|++|.+++..+..+. .+++|++|+|++|.+++. + ....+++
T Consensus 115 ~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~ 192 (317)
T 3o53_A 115 SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAK 192 (317)
T ss_dssp EECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTT
T ss_pred CccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-ccccccc
Confidence 011234566666666666665555666666677777777766655555443 566677777777776643 2 2334667
Q ss_pred CCeeecccccCcCccC
Q 008031 144 LSSFNVSYNNLSGPVP 159 (580)
Q Consensus 144 L~~l~l~~n~l~~~~p 159 (580)
|+.|++++|++++.++
T Consensus 193 L~~L~Ls~N~l~~l~~ 208 (317)
T 3o53_A 193 LKTLDLSSNKLAFMGP 208 (317)
T ss_dssp CCEEECCSSCCCEECG
T ss_pred CCEEECCCCcCCcchh
Confidence 7777777777765444
No 342
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=3.8e-17 Score=149.88 Aligned_cols=128 Identities=27% Similarity=0.400 Sum_probs=117.4
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
.++++++|+|+ .+|..+. ++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 36899999999 7777664 58999999999999 67789999999999999999999888888999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCC
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG 132 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 132 (580)
+|+...+..|..+++|+.|+|++|+|+...+..+..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999988899999999999999999997777779999999999999999974
No 343
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=2.1e-17 Score=148.26 Aligned_cols=133 Identities=29% Similarity=0.337 Sum_probs=118.7
Q ss_pred CEEEecCCccc-ccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLS-GRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|+|++|.|+ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|+|++.+|..+..+++|+.|+|++
T Consensus 27 ~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 104 (168)
T 2ell_A 27 RELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSG 104 (168)
T ss_dssp SEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBS
T ss_pred CEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccC
Confidence 47999999998 77888899999999999999999965 7899999999999999999977888888899999999999
Q ss_pred CCCCcccc-hhhhccCCCCeeeeccccccccCC---ccccCCCCCcEEEccccccCCcccc
Q 008031 80 NNLDDQIL-DSLDKLHNLSVLNLKRNQISGHIP---STIGNISTLTILDLSQNKLSGEIPA 136 (580)
Q Consensus 80 N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~~~ 136 (580)
|.|++... ..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+. ..|.
T Consensus 105 N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 105 NKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp SSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred CccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99987543 788999999999999999996554 47889999999999999987 4443
No 344
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.71 E-value=2.1e-17 Score=177.61 Aligned_cols=158 Identities=26% Similarity=0.317 Sum_probs=142.6
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCC
Q 008031 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82 (580)
Q Consensus 3 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 82 (580)
.|+++|.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|.+
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 578899999 7887665 7999999999999988889999999999999999999988888999999999999999999
Q ss_pred CcccchhhhccCCCCeeeecccccccc-CCccccCCCCCcEEEccccccCCccc-ccccCcCCCCeeecccccCcCccCh
Q 008031 83 DDQILDSLDKLHNLSVLNLKRNQISGH-IPSTIGNISTLTILDLSQNKLSGEIP-ASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 83 ~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
++..+..|..+++|++|+|++|++++. .|..+..+++|++|++++|.+.+.++ ..|..+++|+.|++++|.+++..|.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 998888899999999999999999863 56789999999999999999555554 6899999999999999999988887
Q ss_pred hhh
Q 008031 161 SLA 163 (580)
Q Consensus 161 ~~~ 163 (580)
.+.
T Consensus 167 ~l~ 169 (549)
T 2z81_A 167 SLK 169 (549)
T ss_dssp TTT
T ss_pred hhh
Confidence 654
No 345
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.71 E-value=9.5e-18 Score=166.96 Aligned_cols=143 Identities=24% Similarity=0.190 Sum_probs=74.9
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|+|++. + ..++|++|++++|.+++..+. .+++|++|+|++|++++..+..+..+++|+.|+|++|.
T Consensus 84 ~L~Ls~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (317)
T 3o53_A 84 TLDLNNNYVQEL-L----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (317)
T ss_dssp EEECCSSEEEEE-E----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSC
T ss_pred EEECcCCccccc-c----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCC
Confidence 566666666632 2 225556666666655543222 24455555555555554444455555555555555555
Q ss_pred CCcccchhh-hccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCc
Q 008031 82 LDDQILDSL-DKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLS 155 (580)
Q Consensus 82 l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~ 155 (580)
+++..+..+ ..+++|++|+|++|.+++. +. ...+++|++|+|++|.+++ ++..+..+++|+.|++++|+++
T Consensus 156 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC
T ss_pred CCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc
Confidence 555444444 2455555555555555533 21 2235555555555555553 3333555555555555555555
No 346
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.71 E-value=8.4e-18 Score=177.23 Aligned_cols=167 Identities=23% Similarity=0.201 Sum_probs=133.9
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..+ .++|+.|+|++|.|++..+. .+++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 83 ~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 154 (487)
T 3oja_A 83 RTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154 (487)
T ss_dssp CEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTS
T ss_pred CEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCC
Confidence 479999999994332 38999999999999966543 4688999999999999888888999999999999999
Q ss_pred CCCcccchhhh-ccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 81 NLDDQILDSLD-KLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 81 ~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
.|++..|..+. .+++|+.|+|++|.|++..+ +..+++|++|+|++|.+++ +|..+..+++|+.|++++|.+++. |
T Consensus 155 ~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~l-p 230 (487)
T 3oja_A 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLI-E 230 (487)
T ss_dssp CCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEE-C
T ss_pred CCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCccc-c
Confidence 99998888776 78999999999999986633 4458999999999999996 455588999999999999999974 4
Q ss_pred hhhhh--hcCCCcccccccccC
Q 008031 160 TSLAL--KFNASSFVGNIQLCG 179 (580)
Q Consensus 160 ~~~~~--~~~~~~~~~~~~~~~ 179 (580)
..+.. .+....+.+|+..|+
T Consensus 231 ~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 231 KALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp TTCCCCTTCCEEECTTCCBCHH
T ss_pred hhhccCCCCCEEEcCCCCCcCc
Confidence 43321 233334456666554
No 347
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.71 E-value=4.7e-17 Score=175.00 Aligned_cols=145 Identities=27% Similarity=0.425 Sum_probs=124.1
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|. .++ .+..+++|+.|+|++|.|++..+ +..+++|+.|+|++|+|++ ++ .|..+++|+.|+|++|
T Consensus 46 ~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N 119 (605)
T 1m9s_A 46 DQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHN 119 (605)
T ss_dssp CCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTS
T ss_pred CEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCC
Confidence 35789999998 344 58999999999999999996544 8899999999999999984 44 6889999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
.|+.. ..+..|++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|+|++.
T Consensus 120 ~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 120 GISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 99774 4688899999999999999865 568889999999999999987656 88999999999999999875
No 348
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=7.3e-17 Score=146.02 Aligned_cols=134 Identities=22% Similarity=0.324 Sum_probs=110.7
Q ss_pred CCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeec
Q 008031 23 ELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLK 102 (580)
Q Consensus 23 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 102 (580)
+.+.+++++|+++. +|..+ .++|+.|+|++|++++..+..|..+++|++|+|++|+|+...+..+..+++|+.|+|+
T Consensus 8 ~~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 35788888888884 45433 3688999999999886666677888899999999999987777778888999999999
Q ss_pred cccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 103 RNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 103 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
+|++++..+..+..+++|++|+|++|.+++..+..+..+++|+.|++++|++.+..|
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999987777778888999999999999987666667889999999999999988766
No 349
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=2e-17 Score=145.09 Aligned_cols=129 Identities=21% Similarity=0.259 Sum_probs=114.2
Q ss_pred CCCCcEEEccCCccC-CCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCee
Q 008031 21 LSELQEISLSHNKIS-GVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVL 99 (580)
Q Consensus 21 l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 99 (580)
.++|+.|++++|.++ +.+|..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++..|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 67888889999999999999999955 778999999999999999988788888889999999
Q ss_pred eecccccccc-CCccccCCCCCcEEEccccccCCccc---ccccCcCCCCeeeccc
Q 008031 100 NLKRNQISGH-IPSTIGNISTLTILDLSQNKLSGEIP---ASFSNLKSLSSFNVSY 151 (580)
Q Consensus 100 ~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~l~~l~~L~~l~l~~ 151 (580)
++++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999864 34778999999999999999996655 4789999999999864
No 350
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.71 E-value=7.3e-17 Score=162.76 Aligned_cols=147 Identities=26% Similarity=0.424 Sum_probs=71.6
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|++++|.+.+..+ +..+++|++|++++|.+++. +. +..+++|+.|++++|++++..+ +..+++|+.|++++|.
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNK 232 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCc
Confidence 45666666653222 55666666666666666532 21 4455555555555555543222 4445555555555555
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
++...+ +..+++|+.|++++|.+++. +.+..+++|++|++++|.+++. ..+..+++|+.|++++|++++..|.
T Consensus 233 l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 233 ITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred cCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh
Confidence 544332 44445555555555554432 2344445555555555554432 2344444555555555554444333
No 351
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.70 E-value=6.9e-17 Score=173.73 Aligned_cols=146 Identities=30% Similarity=0.413 Sum_probs=130.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.|++..+ +.++++|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|
T Consensus 68 ~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N 141 (605)
T 1m9s_A 68 TKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNN 141 (605)
T ss_dssp CEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSS
T ss_pred CEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCC
Confidence 479999999996544 9999999999999999995 34 78999999999999999995 3 45899999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCcc
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPV 158 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~ 158 (580)
.|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++++.+
T Consensus 142 ~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 142 KITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred ccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 99875 678899999999999999997666 89999999999999999964 46999999999999999998653
No 352
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=1.2e-16 Score=144.59 Aligned_cols=131 Identities=24% Similarity=0.320 Sum_probs=116.8
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
.+++++|+++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 11 ~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 6899999999 5665443 699999999999998777788999999999999999997777778999999999999999
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCccc
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP 135 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 135 (580)
|++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|.+++..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 998888888999999999999999997777667889999999999999986543
No 353
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=4e-17 Score=150.50 Aligned_cols=135 Identities=18% Similarity=0.326 Sum_probs=121.3
Q ss_pred ccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCC
Q 008031 18 LGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLS 97 (580)
Q Consensus 18 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 97 (580)
...+++|+.|++++|.|+ .+| .+..+++|++|++++|.++ .+ ..+..+++|++|++++|.+++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 467789999999999999 556 6899999999999999887 33 4789999999999999999988888999999999
Q ss_pred eeeeccccccccCCccccCCCCCcEEEccccc-cCCcccccccCcCCCCeeecccccCcCcc
Q 008031 98 VLNLKRNQISGHIPSTIGNISTLTILDLSQNK-LSGEIPASFSNLKSLSSFNVSYNNLSGPV 158 (580)
Q Consensus 98 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~l~~l~~L~~l~l~~n~l~~~~ 158 (580)
+|++++|++++..+..+..+++|++|+|++|. ++ .++ .+..+++|+.|++++|++++..
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~ 175 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR 175 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH
Confidence 99999999998788889999999999999998 66 455 6999999999999999998743
No 354
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=3.7e-17 Score=143.42 Aligned_cols=125 Identities=24% Similarity=0.362 Sum_probs=113.0
Q ss_pred CEEEecCCccc-ccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLS-GRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|+|++.+|..+..+++|+.|++++
T Consensus 20 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~ 97 (149)
T 2je0_A 20 KELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSG 97 (149)
T ss_dssp SEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTT
T ss_pred eEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCC
Confidence 47999999999 78898999999999999999999966 7899999999999999999977888888899999999999
Q ss_pred CCCCcc-cchhhhccCCCCeeeeccccccccCC---ccccCCCCCcEEEccc
Q 008031 80 NNLDDQ-ILDSLDKLHNLSVLNLKRNQISGHIP---STIGNISTLTILDLSQ 127 (580)
Q Consensus 80 N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~l~~ 127 (580)
|.+++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 98 N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 98 NKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp SCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999875 34789999999999999999997655 4788999999999874
No 355
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.69 E-value=1.1e-16 Score=161.48 Aligned_cols=149 Identities=30% Similarity=0.463 Sum_probs=131.7
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|++++|.+++ ++. +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++. +. +..+++|+.|++++|
T Consensus 180 ~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n 253 (347)
T 4fmz_A 180 YSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTN 253 (347)
T ss_dssp SEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSS
T ss_pred CEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCC
Confidence 479999999994 443 8999999999999999996543 88999999999999999954 43 889999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
.++.. ..+..+++|+.|++++|++++. +.+..+++|+.|++++|.+++..+..+..+++|+.|++++|++++.+|
T Consensus 254 ~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 254 QISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred ccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 99874 4688999999999999999864 458889999999999999998888889999999999999999998877
No 356
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=8.5e-18 Score=185.34 Aligned_cols=122 Identities=25% Similarity=0.320 Sum_probs=67.4
Q ss_pred CCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccC
Q 008031 37 VMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGN 116 (580)
Q Consensus 37 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 116 (580)
..++.|..+++|+.|+|++|+|. .+|..+..+++|+.|+|++|.|+ .+|..|..|++|+.|+|++|+|+ .+|..++.
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 34555555666666666666665 44544555666666666666665 44555556666666666666665 44555666
Q ss_pred CCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccChhh
Q 008031 117 ISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPTSL 162 (580)
Q Consensus 117 l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~~~ 162 (580)
+++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|++.+|..+
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 666666666666655 445556666666666666666665555544
No 357
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.69 E-value=3.2e-17 Score=163.78 Aligned_cols=137 Identities=14% Similarity=0.182 Sum_probs=99.3
Q ss_pred HhhhccccccCceEEEEEEeCCCCEEEEEEccccccc--------------cHH--------HHHHHHHHHhcCCCCcce
Q 008031 289 CATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITK--------------GQR--------EFESEVSLLGKIRHPNLL 346 (580)
Q Consensus 289 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~--------~~~~e~~~l~~l~h~niv 346 (580)
|++.+.||+|+||.||+|...+|+.||||+++..... ... ...+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5567899999999999999999999999987532110 001 124567777777544432
Q ss_pred eeeeEEECCCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCC-
Q 008031 347 ALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDST- 425 (580)
Q Consensus 347 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~- 425 (580)
-..-+.. ...++||||++|++|.++... .....++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 177 vp~p~~~---~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~-gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 177 VPEPIAQ---SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH-GLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CCCEEEE---ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEEEEEC
T ss_pred CCeeeec---cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeCCCC
Confidence 2211211 134799999999888765432 12456889999999999994 999999999999998766
Q ss_pred ---------CeEEeeccccccc
Q 008031 426 ---------NAKISDFGLSRLM 438 (580)
Q Consensus 426 ---------~~kl~Dfg~~~~~ 438 (580)
.+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 3899999976543
No 358
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.68 E-value=1.5e-16 Score=169.21 Aligned_cols=142 Identities=23% Similarity=0.372 Sum_probs=86.7
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|+|++ +|. +.+ +|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 44555555553 443 333 55555555555553 333 35566666666666653 443 35566777777777
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCC-------cEEEccccccCCcccccccCcCCCCeeecccccC
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTL-------TILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNL 154 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L-------~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l 154 (580)
|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|+|
T Consensus 172 L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp CSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred CCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 665 333 43 67777777777777 4554 443 56 77888888887 5677677788888888888888
Q ss_pred cCccChhhhh
Q 008031 155 SGPVPTSLAL 164 (580)
Q Consensus 155 ~~~~p~~~~~ 164 (580)
++.+|..+..
T Consensus 243 ~~~~p~~l~~ 252 (571)
T 3cvr_A 243 SSRIRESLSQ 252 (571)
T ss_dssp CHHHHHHHHH
T ss_pred CCcCHHHHHH
Confidence 8777776653
No 359
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=8.8e-17 Score=155.19 Aligned_cols=142 Identities=22% Similarity=0.313 Sum_probs=123.1
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCC
Q 008031 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82 (580)
Q Consensus 3 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 82 (580)
++|++|.+++ ++ .+..+++|+.|++++|.|+. ++ .+..+++|+.|+|++|+|++..+ +..+++|+.|+|++|++
T Consensus 24 l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l 97 (263)
T 1xeu_A 24 QNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRL 97 (263)
T ss_dssp HHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCC
T ss_pred HHhcCCCccc-cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCcc
Confidence 5688899984 44 68899999999999999994 55 68899999999999999995544 99999999999999999
Q ss_pred CcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 83 DDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 83 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
++..+ +.. ++|+.|+|++|++++. + .+..+++|+.|+|++|++++. + .+..+++|+.|++++|++++.
T Consensus 98 ~~l~~--~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 98 KNLNG--IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp SCCTT--CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCcCc--ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 87433 333 8999999999999964 3 589999999999999999964 4 689999999999999999976
No 360
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.67 E-value=4.1e-16 Score=163.82 Aligned_cols=144 Identities=33% Similarity=0.456 Sum_probs=87.5
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|++++|.+++..+ ++.+++|++|++++|.+++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.
T Consensus 203 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 276 (466)
T 1o6v_A 203 SLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 276 (466)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSC
T ss_pred EEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCc
Confidence 56777777774433 56666777777777766643 346666666666666666664433 5666666666666666
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|.+++..+ +..+++|+.|++++|++++.
T Consensus 277 l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 277 ISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 655433 5566666666666666664333 5556666666666666665443 55556666666666666543
No 361
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.67 E-value=3.5e-16 Score=164.39 Aligned_cols=147 Identities=32% Similarity=0.480 Sum_probs=129.6
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|++++ + +.+..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|
T Consensus 224 ~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n 297 (466)
T 1o6v_A 224 DELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN 297 (466)
T ss_dssp CEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred CEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCC
Confidence 478999999995 3 468999999999999999996544 8899999999999999995544 889999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..|
T Consensus 298 ~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 298 QLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred cccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 9987655 7899999999999999997665 78899999999999999965 468999999999999999998877
No 362
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.67 E-value=1.4e-16 Score=143.89 Aligned_cols=135 Identities=19% Similarity=0.215 Sum_probs=117.3
Q ss_pred ccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCC
Q 008031 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHN 95 (580)
Q Consensus 16 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 95 (580)
..+.++.+|++|+|++|.++. +|......++|++|+|++|+|++. ..|..+++|+.|+|++|.|++..+..+..+++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 457889999999999999995 465444445999999999999954 67999999999999999999876667799999
Q ss_pred CCeeeeccccccccCCc--cccCCCCCcEEEccccccCCccccc----ccCcCCCCeeecccccCc
Q 008031 96 LSVLNLKRNQISGHIPS--TIGNISTLTILDLSQNKLSGEIPAS----FSNLKSLSSFNVSYNNLS 155 (580)
Q Consensus 96 L~~L~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~----l~~l~~L~~l~l~~n~l~ 155 (580)
|+.|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||++.|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999997 4555 7889999999999999998 55654 899999999999999876
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.66 E-value=5.8e-18 Score=181.04 Aligned_cols=153 Identities=20% Similarity=0.216 Sum_probs=128.2
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCc-------------cCCCCCccccC------------------------
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNK-------------ISGVMPSDLGR------------------------ 44 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~-------------l~~~~~~~~~~------------------------ 44 (580)
.|+|++|+|+ .+|+.+++|++|++|++++|. +.+..|..+..
T Consensus 353 ~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~ 431 (567)
T 1dce_A 353 RCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLL 431 (567)
T ss_dssp SCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred eccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhhhh
Confidence 4678888887 788888888888888887664 23233332221
Q ss_pred --------CCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccC
Q 008031 45 --------LSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGN 116 (580)
Q Consensus 45 --------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 116 (580)
...|+.|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +| .++.
T Consensus 432 ~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~ 506 (567)
T 1dce_A 432 ENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVAN 506 (567)
T ss_dssp HHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTT
T ss_pred cccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCC
Confidence 1258899999999995 676 999999999999999998 668899999999999999999996 56 7999
Q ss_pred CCCCcEEEccccccCCcc-cccccCcCCCCeeecccccCcCccCh
Q 008031 117 ISTLTILDLSQNKLSGEI-PASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 117 l~~L~~L~l~~N~l~~~~-~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
+++|++|+|++|+|++.. |..|..+++|+.|+|++|++++.+|.
T Consensus 507 l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 507 LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 999999999999999876 99999999999999999999987764
No 364
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.63 E-value=2.8e-16 Score=173.24 Aligned_cols=157 Identities=21% Similarity=0.237 Sum_probs=125.7
Q ss_pred EEecCCcccc---------cccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCC
Q 008031 3 LALQYNNLSG---------RIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLV 73 (580)
Q Consensus 3 L~L~~N~i~~---------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 73 (580)
++|+.|.|.+ ..+..+..+++|+.|+|++|.|. .+|..+..+++|++|+|++|+|+ .+|..|.+|++|+
T Consensus 196 l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 273 (727)
T 4b8c_D 196 KKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLR 273 (727)
T ss_dssp --------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCC
T ss_pred CccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCC
Confidence 4556655553 44778999999999999999999 67777779999999999999999 8899999999999
Q ss_pred EEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCC-CCeeecccc
Q 008031 74 SLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKS-LSSFNVSYN 152 (580)
Q Consensus 74 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~-L~~l~l~~n 152 (580)
.|+|++|.|+ .+|..|..|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..|+|++|
T Consensus 274 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N 351 (727)
T 4b8c_D 274 VLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDN 351 (727)
T ss_dssp EEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccC
Confidence 9999999998 56889999999999999999998 77888999999999999999999988888766532 235899999
Q ss_pred cCcCccChhhh
Q 008031 153 NLSGPVPTSLA 163 (580)
Q Consensus 153 ~l~~~~p~~~~ 163 (580)
.+++.+|..+.
T Consensus 352 ~l~~~~p~~l~ 362 (727)
T 4b8c_D 352 RPEIPLPHERR 362 (727)
T ss_dssp CCCCCCCCC--
T ss_pred cccCcCccccc
Confidence 99999998654
No 365
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.63 E-value=8.1e-17 Score=163.38 Aligned_cols=163 Identities=21% Similarity=0.245 Sum_probs=130.9
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCC----ccccCCC-CCCEEEeeCCcCCCCCCccCcCC-----C
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMP----SDLGRLS-RLRILDFSYNAINGSLPASFSNL-----S 70 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l-----~ 70 (580)
|+++|++|.+++.+|..+...++|++|||++|.|+...+ ..|..++ +|++|+|++|+|++..+..|..+ +
T Consensus 1 ~~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 1 MNYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp CEEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred CccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 578999999998888877777789999999999997666 7788888 89999999999987766666664 8
Q ss_pred CCCEEECcCCCCCcccchhhhc----c-CCCCeeeeccccccccCCccccC-----CCCCcEEEccccccCCcc----cc
Q 008031 71 SLVSLTLESNNLDDQILDSLDK----L-HNLSVLNLKRNQISGHIPSTIGN-----ISTLTILDLSQNKLSGEI----PA 136 (580)
Q Consensus 71 ~L~~L~l~~N~l~~~~~~~~~~----l-~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~~----~~ 136 (580)
+|++|+|++|.+++..+..+.. + ++|+.|+|++|++++..+..+.. .++|++|+|++|.+++.. +.
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999998777665544 3 89999999999998766554433 368999999999998533 33
Q ss_pred cccCcC-CCCeeecccccCcCccChhhh
Q 008031 137 SFSNLK-SLSSFNVSYNNLSGPVPTSLA 163 (580)
Q Consensus 137 ~l~~l~-~L~~l~l~~n~l~~~~p~~~~ 163 (580)
.+..++ +|+.|++++|++++..+..+.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 188 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELA 188 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHH
Confidence 445555 899999999999877766554
No 366
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.63 E-value=7.5e-17 Score=161.92 Aligned_cols=161 Identities=17% Similarity=0.216 Sum_probs=128.7
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCC-CCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGV-MPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|++++|.+++..+. +.++++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+..+++|++|+|++
T Consensus 73 ~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~ 151 (336)
T 2ast_B 73 IAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 151 (336)
T ss_dssp SEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred eEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCC
Confidence 3688999999865544 66789999999999998754 677788899999999999998877778888899999999999
Q ss_pred C-CCCcc-cchhhhccCCCCeeeeccc-ccccc-CCccccCCC-CCcEEEcccc--ccC-CcccccccCcCCCCeeeccc
Q 008031 80 N-NLDDQ-ILDSLDKLHNLSVLNLKRN-QISGH-IPSTIGNIS-TLTILDLSQN--KLS-GEIPASFSNLKSLSSFNVSY 151 (580)
Q Consensus 80 N-~l~~~-~~~~~~~l~~L~~L~l~~N-~l~~~-~~~~~~~l~-~L~~L~l~~N--~l~-~~~~~~l~~l~~L~~l~l~~ 151 (580)
| .+++. .+..+..+++|++|++++| .+++. ++..+..++ +|++|+|++| .++ +.++..+..+++|+.|++++
T Consensus 152 ~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~ 231 (336)
T 2ast_B 152 CSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD 231 (336)
T ss_dssp CBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTT
T ss_pred CCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCC
Confidence 8 67763 5666788899999999999 88754 566677888 9999999998 455 35566777888999999999
Q ss_pred cc-CcCccChhh
Q 008031 152 NN-LSGPVPTSL 162 (580)
Q Consensus 152 n~-l~~~~p~~~ 162 (580)
|. +++..+..+
T Consensus 232 ~~~l~~~~~~~l 243 (336)
T 2ast_B 232 SVMLKNDCFQEF 243 (336)
T ss_dssp CTTCCGGGGGGG
T ss_pred CCcCCHHHHHHH
Confidence 98 665555544
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.62 E-value=4.6e-18 Score=156.96 Aligned_cols=146 Identities=24% Similarity=0.325 Sum_probs=95.2
Q ss_pred EEecCCcccccccc------cccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEE
Q 008031 3 LALQYNNLSGRIPA------SLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLT 76 (580)
Q Consensus 3 L~L~~N~i~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 76 (580)
++|+.|.+++.+|. .+..+++|++|+|++|.|++ +| .+..+++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 23 l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~ 99 (198)
T 1ds9_A 23 TEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELW 99 (198)
T ss_dssp TTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEE
T ss_pred cchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEE
Confidence 45556666655554 67777777777777777774 45 6667777777777777776 5566666667777777
Q ss_pred CcCCCCCcccchhhhccCCCCeeeeccccccccCC-ccccCCCCCcEEEccccccCCcccc----------cccCcCCCC
Q 008031 77 LESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIP-STIGNISTLTILDLSQNKLSGEIPA----------SFSNLKSLS 145 (580)
Q Consensus 77 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~----------~l~~l~~L~ 145 (580)
|++|++++. + .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++..|. .+..+++|+
T Consensus 100 L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~ 177 (198)
T 1ds9_A 100 ISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLK 177 (198)
T ss_dssp EEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCS
T ss_pred CcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcE
Confidence 777777653 2 46667777777777777764322 3566677777777777777654443 256667777
Q ss_pred eeecccccCc
Q 008031 146 SFNVSYNNLS 155 (580)
Q Consensus 146 ~l~l~~n~l~ 155 (580)
.|| +|+++
T Consensus 178 ~Ld--~~~i~ 185 (198)
T 1ds9_A 178 KLD--GMPVD 185 (198)
T ss_dssp EEC--CGGGT
T ss_pred EEC--CcccC
Confidence 665 55554
No 368
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.62 E-value=3.3e-17 Score=167.83 Aligned_cols=157 Identities=18% Similarity=0.259 Sum_probs=95.4
Q ss_pred CEEEecCC---cccccccccc-------cCCCCCcEEEccCCccCC----CCCccccCCCCCCEEEeeCCcCCCCCCcc-
Q 008031 1 MFLALQYN---NLSGRIPASL-------GKLSELQEISLSHNKISG----VMPSDLGRLSRLRILDFSYNAINGSLPAS- 65 (580)
Q Consensus 1 ~~L~L~~N---~i~~~~~~~~-------~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~- 65 (580)
++|+|++| ++++.+|..+ .++++|++|+|++|.|+. .+|..+..+++|++|+|++|.|+...+..
T Consensus 63 ~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l 142 (386)
T 2ca6_A 63 EIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI 142 (386)
T ss_dssp CEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHH
T ss_pred cEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHH
Confidence 35677775 3334444443 567777777777777775 24556666777777777777775322222
Q ss_pred ---CcCC---------CCCCEEECcCCCCCc-ccc---hhhhccCCCCeeeeccccccc-----cCCccccCCCCCcEEE
Q 008031 66 ---FSNL---------SSLVSLTLESNNLDD-QIL---DSLDKLHNLSVLNLKRNQISG-----HIPSTIGNISTLTILD 124 (580)
Q Consensus 66 ---~~~l---------~~L~~L~l~~N~l~~-~~~---~~~~~l~~L~~L~l~~N~l~~-----~~~~~~~~l~~L~~L~ 124 (580)
+..+ ++|++|+|++|+++. ..+ ..+..+++|+.|+|++|+++. ..+..+..+++|++|+
T Consensus 143 ~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~ 222 (386)
T 2ca6_A 143 ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLD 222 (386)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEE
T ss_pred HHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEE
Confidence 2233 677777777777752 223 345566677777777776652 2333566666777777
Q ss_pred ccccccC----CcccccccCcCCCCeeecccccCcCc
Q 008031 125 LSQNKLS----GEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 125 l~~N~l~----~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
|++|.++ ..++..+..+++|+.|+|++|.+++.
T Consensus 223 Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 223 LQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp CCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred CcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 7777664 34555666666777777777766644
No 369
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.62 E-value=1.3e-15 Score=153.72 Aligned_cols=159 Identities=19% Similarity=0.184 Sum_probs=114.4
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCC-CccccCCCCCCE-EEeeCCcCCCCCCccCcCCCCCCEEECc
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVM-PSDLGRLSRLRI-LDFSYNAINGSLPASFSNLSSLVSLTLE 78 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 78 (580)
++|+|++|+|+.+.+..|.++++|++|+|++|.+.+.+ +..|..+++|+. +.+++|+|+...|..|..+++|++|+++
T Consensus 33 ~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~ 112 (350)
T 4ay9_X 33 IELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLIS 112 (350)
T ss_dssp SEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEE
T ss_pred CEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccc
Confidence 47899999999544567899999999999999986544 456788888775 6667788887777888899999999999
Q ss_pred CCCCCcccchhhh-------------------------cc-CCCCeeeeccccccccCCccccCCCCCcEEEccc-cccC
Q 008031 79 SNNLDDQILDSLD-------------------------KL-HNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQ-NKLS 131 (580)
Q Consensus 79 ~N~l~~~~~~~~~-------------------------~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~ 131 (580)
+|+|+...+..+. .+ ..++.|+|++|+|+. ++.......+|+.|++++ |.++
T Consensus 113 ~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~ 191 (350)
T 4ay9_X 113 NTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLE 191 (350)
T ss_dssp EECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCC
T ss_pred ccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCccc
Confidence 8888664433221 12 246667777777774 344444456777788764 5555
Q ss_pred CcccccccCcCCCCeeecccccCcCccCh
Q 008031 132 GEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 132 ~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
...+..|..+++|+.||+++|+|+..++.
T Consensus 192 ~i~~~~f~~l~~L~~LdLs~N~l~~lp~~ 220 (350)
T 4ay9_X 192 ELPNDVFHGASGPVILDISRTRIHSLPSY 220 (350)
T ss_dssp CCCTTTTTTEECCSEEECTTSCCCCCCSS
T ss_pred CCCHHHhccCcccchhhcCCCCcCccChh
Confidence 44445678888888888888888865443
No 370
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.62 E-value=1e-16 Score=160.99 Aligned_cols=152 Identities=21% Similarity=0.277 Sum_probs=76.5
Q ss_pred EEEecCCccccc-ccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCC-cCCC-CCCccCcCCCCCCEEECc
Q 008031 2 FLALQYNNLSGR-IPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYN-AING-SLPASFSNLSSLVSLTLE 78 (580)
Q Consensus 2 ~L~L~~N~i~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~-~~~~~~~~l~~L~~L~l~ 78 (580)
+|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+..+++|++|+|++| .+++ .++..+..+++|++|+++
T Consensus 97 ~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~ 176 (336)
T 2ast_B 97 HMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLS 176 (336)
T ss_dssp EEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECC
T ss_pred EEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCC
Confidence 455555555533 4444555555555555555555444445555555555555555 3442 133444455555555555
Q ss_pred CC-CCCcc-cchhhhccC-CCCeeeeccc--ccc-ccCCccccCCCCCcEEEccccc-cCCcccccccCcCCCCeeeccc
Q 008031 79 SN-NLDDQ-ILDSLDKLH-NLSVLNLKRN--QIS-GHIPSTIGNISTLTILDLSQNK-LSGEIPASFSNLKSLSSFNVSY 151 (580)
Q Consensus 79 ~N-~l~~~-~~~~~~~l~-~L~~L~l~~N--~l~-~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~l~~l~~L~~l~l~~ 151 (580)
+| .+++. .+..+..++ +|++|++++| .++ +.++..+..+++|++|+|++|. +++..+..+..+++|+.|++++
T Consensus 177 ~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~ 256 (336)
T 2ast_B 177 WCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSR 256 (336)
T ss_dssp CCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred CCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCC
Confidence 55 55432 344445555 5555555555 232 2233344455555555555555 4444444555555555555555
Q ss_pred cc
Q 008031 152 NN 153 (580)
Q Consensus 152 n~ 153 (580)
|.
T Consensus 257 ~~ 258 (336)
T 2ast_B 257 CY 258 (336)
T ss_dssp CT
T ss_pred CC
Confidence 53
No 371
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.61 E-value=5.4e-15 Score=154.37 Aligned_cols=139 Identities=19% Similarity=0.258 Sum_probs=110.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++. + ++++++|++|+|++|.++++ | +..+++|++|++++|+|++. + +..+++|++|++++|
T Consensus 88 ~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 88 TYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLN 158 (457)
T ss_dssp SEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTC
T ss_pred CEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCC
Confidence 4789999999964 3 88999999999999999864 4 88899999999999999863 3 778888888888888
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcC
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSG 156 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~ 156 (580)
...+.. .+..+++|+.|++++|++++ +| +..+++|+.|++++|.+++. .+..+++|+.|++++|++++
T Consensus 159 ~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 159 KKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp SCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred Cccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 544433 46677888888888888875 34 67778888888888888754 37777888888888888876
No 372
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.61 E-value=1.2e-16 Score=162.22 Aligned_cols=159 Identities=19% Similarity=0.249 Sum_probs=128.2
Q ss_pred CEEEecCCccccccc----ccccCCC-CCcEEEccCCccCCCCCccccCC-----CCCCEEEeeCCcCCCCCCcc----C
Q 008031 1 MFLALQYNNLSGRIP----ASLGKLS-ELQEISLSHNKISGVMPSDLGRL-----SRLRILDFSYNAINGSLPAS----F 66 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~----~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~----~ 66 (580)
++|||++|.|++..+ ..|.+++ +|++|+|++|.|++..+..+..+ ++|++|+|++|+|++..+.. +
T Consensus 25 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 104 (362)
T 3goz_A 25 TSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTL 104 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHH
T ss_pred eEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHH
Confidence 479999999997666 7888998 89999999999998777777775 99999999999999665553 4
Q ss_pred cCC-CCCCEEECcCCCCCcccchhhhc-----cCCCCeeeeccccccccCCc----cccCCC-CCcEEEccccccCCccc
Q 008031 67 SNL-SSLVSLTLESNNLDDQILDSLDK-----LHNLSVLNLKRNQISGHIPS----TIGNIS-TLTILDLSQNKLSGEIP 135 (580)
Q Consensus 67 ~~l-~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~~~~----~~~~l~-~L~~L~l~~N~l~~~~~ 135 (580)
..+ ++|+.|+|++|.|+...+..+.. ..+|++|+|++|++++.... .+..++ +|++|+|++|.+++..+
T Consensus 105 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 105 AAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 445 89999999999998877665543 36999999999999864433 345555 99999999999987666
Q ss_pred ccc----cCc-CCCCeeecccccCcCccC
Q 008031 136 ASF----SNL-KSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 136 ~~l----~~l-~~L~~l~l~~n~l~~~~p 159 (580)
..+ ..+ ++|+.|||++|.+++...
T Consensus 185 ~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~ 213 (362)
T 3goz_A 185 AELAKFLASIPASVTSLDLSANLLGLKSY 213 (362)
T ss_dssp HHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHHHHHHhCCCCCCEEECCCCCCChhHH
Confidence 544 444 599999999999986433
No 373
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.60 E-value=8.3e-17 Score=164.89 Aligned_cols=164 Identities=21% Similarity=0.308 Sum_probs=135.0
Q ss_pred CEEEecCCcccc----cccccccCCCCCcEEEccCCccCCCCCcccc----CC---------CCCCEEEeeCCcCC-CCC
Q 008031 1 MFLALQYNNLSG----RIPASLGKLSELQEISLSHNKISGVMPSDLG----RL---------SRLRILDFSYNAIN-GSL 62 (580)
Q Consensus 1 ~~L~L~~N~i~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~l---------~~L~~L~l~~n~l~-~~~ 62 (580)
++|+|++|.|++ .++..+.++++|++|+|++|.|+...+..+. .+ ++|++|+|++|+|+ ..+
T Consensus 97 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~ 176 (386)
T 2ca6_A 97 HTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSM 176 (386)
T ss_dssp CEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGH
T ss_pred cEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHH
Confidence 479999999997 4788899999999999999999744333333 34 89999999999997 344
Q ss_pred C---ccCcCCCCCCEEECcCCCCCc-----ccchhhhccCCCCeeeecccccc----ccCCccccCCCCCcEEEcccccc
Q 008031 63 P---ASFSNLSSLVSLTLESNNLDD-----QILDSLDKLHNLSVLNLKRNQIS----GHIPSTIGNISTLTILDLSQNKL 130 (580)
Q Consensus 63 ~---~~~~~l~~L~~L~l~~N~l~~-----~~~~~~~~l~~L~~L~l~~N~l~----~~~~~~~~~l~~L~~L~l~~N~l 130 (580)
+ ..|..+++|+.|+|++|+|+. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|++|+|++|.+
T Consensus 177 ~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i 256 (386)
T 2ca6_A 177 KEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLL 256 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred HHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCC
Confidence 4 467789999999999999973 34447888999999999999996 56778889999999999999999
Q ss_pred CCc----cccccc--CcCCCCeeecccccCcC----ccChhhhh
Q 008031 131 SGE----IPASFS--NLKSLSSFNVSYNNLSG----PVPTSLAL 164 (580)
Q Consensus 131 ~~~----~~~~l~--~l~~L~~l~l~~n~l~~----~~p~~~~~ 164 (580)
++. ++..+. .+++|+.|+|++|++++ .+|..+..
T Consensus 257 ~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~ 300 (386)
T 2ca6_A 257 SARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE 300 (386)
T ss_dssp CHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHh
Confidence 865 456664 38999999999999997 46666533
No 374
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.60 E-value=5.9e-15 Score=156.98 Aligned_cols=136 Identities=27% Similarity=0.425 Sum_probs=106.7
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++ +|..+. ++|+.|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. |.. +|+.|+|++|
T Consensus 62 ~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N 130 (571)
T 3cvr_A 62 SELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNN 130 (571)
T ss_dssp SEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCC
Confidence 368999999985 776553 78999999999998 456 457889999999999985 666 655 8999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|.|++ +|. |. ++|+.|+|++|+|+. +|.
T Consensus 131 ~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-lp~ 197 (571)
T 3cvr_A 131 QLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLES-LPA 197 (571)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSS-CCC
T ss_pred cCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCc-hhh
Confidence 9877 343 57888999999998885 554 46788888999888886 565 55 788888888888884 444
No 375
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.59 E-value=9e-15 Score=152.67 Aligned_cols=144 Identities=23% Similarity=0.287 Sum_probs=124.5
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|+|++ ++ ++++++|++|++++|.++++ + +..+++|++|++++|+..+.+ .+..+++|+.|++++|
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 479999999996 44 89999999999999999974 3 888999999999999655455 4888999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
++++. + +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| +..+++|+.|++++|++++.++.
T Consensus 181 ~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 181 KITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp CCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred cccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 99874 3 78889999999999999965 38889999999999999997 55 88999999999999999987654
Q ss_pred h
Q 008031 161 S 161 (580)
Q Consensus 161 ~ 161 (580)
.
T Consensus 252 ~ 252 (457)
T 3bz5_A 252 T 252 (457)
T ss_dssp T
T ss_pred H
Confidence 3
No 376
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=1.6e-15 Score=137.00 Aligned_cols=127 Identities=26% Similarity=0.291 Sum_probs=108.2
Q ss_pred CEEEecCCcccccccccccCCC-CCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 1 MFLALQYNNLSGRIPASLGKLS-ELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
++|+|++|+|+ .++. +..+. +|+.|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 22 ~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 97 (176)
T 1a9n_A 22 RELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTN 97 (176)
T ss_dssp EEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCS
T ss_pred eEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCC
Confidence 36999999999 4554 55554 999999999999965 6899999999999999999965555569999999999999
Q ss_pred CCCCcccc-hhhhccCCCCeeeeccccccccCCcc----ccCCCCCcEEEccccccCC
Q 008031 80 NNLDDQIL-DSLDKLHNLSVLNLKRNQISGHIPST----IGNISTLTILDLSQNKLSG 132 (580)
Q Consensus 80 N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~----~~~l~~L~~L~l~~N~l~~ 132 (580)
|.|+.... ..+..+++|+.|++++|.++ ..|.. +..+++|+.|++++|.+..
T Consensus 98 N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 98 NSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99966443 37889999999999999998 55664 8899999999999998863
No 377
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.59 E-value=6.9e-15 Score=158.40 Aligned_cols=86 Identities=27% Similarity=0.292 Sum_probs=61.4
Q ss_pred CCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeec
Q 008031 70 SSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNV 149 (580)
Q Consensus 70 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l 149 (580)
++|+.|+|++|+|+++ | ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|.|+ .+|..+..+++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 4566666666666542 2 34567777777777777 3444 4677888888888888 66777888888888888
Q ss_pred ccccCcCccChhhhh
Q 008031 150 SYNNLSGPVPTSLAL 164 (580)
Q Consensus 150 ~~n~l~~~~p~~~~~ 164 (580)
++|++++.+|..+..
T Consensus 292 ~~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 292 EGNPLSERTLQALRE 306 (622)
T ss_dssp CSCCCCHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHh
Confidence 888888877776653
No 378
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.57 E-value=1.8e-15 Score=161.79 Aligned_cols=122 Identities=25% Similarity=0.320 Sum_probs=108.7
Q ss_pred CCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeec
Q 008031 23 ELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLK 102 (580)
Q Consensus 23 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 102 (580)
.|+.|+|++|.|++ +|. |..+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58999999999996 565 999999999999999999 889999999999999999999987 45 89999999999999
Q ss_pred cccccccC-CccccCCCCCcEEEccccccCCcccc---cccCcCCCCeeec
Q 008031 103 RNQISGHI-PSTIGNISTLTILDLSQNKLSGEIPA---SFSNLKSLSSFNV 149 (580)
Q Consensus 103 ~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~---~l~~l~~L~~l~l 149 (580)
+|+|++.. |..+..+++|+.|+|++|.+++..+. .+..+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999876 99999999999999999999975442 2345889999874
No 379
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=1.4e-14 Score=129.79 Aligned_cols=108 Identities=24% Similarity=0.320 Sum_probs=90.4
Q ss_pred CCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeec
Q 008031 23 ELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLK 102 (580)
Q Consensus 23 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 102 (580)
+.+.|++++|.|+. +|..+ .++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35788999998884 56555 3788999999999987778888889999999999999988777778889999999999
Q ss_pred cccccccCCccccCCCCCcEEEccccccCCc
Q 008031 103 RNQISGHIPSTIGNISTLTILDLSQNKLSGE 133 (580)
Q Consensus 103 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 133 (580)
+|+|++..+..+..+++|++|+|++|.++..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 9999877776788899999999999988743
No 380
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=1.9e-14 Score=129.33 Aligned_cols=106 Identities=23% Similarity=0.302 Sum_probs=88.8
Q ss_pred CcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeecc
Q 008031 24 LQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKR 103 (580)
Q Consensus 24 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 103 (580)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478899999887 5565553 7899999999999877788888999999999999999887777778889999999999
Q ss_pred ccccccCCccccCCCCCcEEEccccccCC
Q 008031 104 NQISGHIPSTIGNISTLTILDLSQNKLSG 132 (580)
Q Consensus 104 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 132 (580)
|+|++..+..+..+++|++|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99986666668889999999999999873
No 381
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=2.1e-14 Score=128.61 Aligned_cols=110 Identities=25% Similarity=0.310 Sum_probs=100.0
Q ss_pred CCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEcc
Q 008031 47 RLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLS 126 (580)
Q Consensus 47 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 126 (580)
..+.|++++|+|+ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3579999999999 5776663 799999999999999989999999999999999999998777778999999999999
Q ss_pred ccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 127 QNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 127 ~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
+|+|++..+..|..+++|+.|+|++|++.+..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999998777789999999999999999997655
No 382
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.55 E-value=1.7e-14 Score=145.53 Aligned_cols=157 Identities=18% Similarity=0.177 Sum_probs=126.8
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCC-ccCcCCCCCCE-EECcC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLP-ASFSNLSSLVS-LTLES 79 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~-L~l~~ 79 (580)
.++.++|+|+ .+|..+. +++++|+|++|+|+.+.++.|..+++|++|+|++|++.+.+| ..|.++++|++ +.+.+
T Consensus 13 ~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 5688899999 7887763 689999999999997767789999999999999999876555 56889998775 66778
Q ss_pred CCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccc-cccCCcccccccCcC-CCCeeecccccCcCc
Q 008031 80 NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQ-NKLSGEIPASFSNLK-SLSSFNVSYNNLSGP 157 (580)
Q Consensus 80 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~l~~l~-~L~~l~l~~n~l~~~ 157 (580)
|+|+.+.+..|..+++|+.|++++|+++...+..+....++..|++.+ |.+....+..|..+. .++.|++++|+|+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 999998899999999999999999999976666666777788888865 466644455666654 577888888888755
Q ss_pred cChh
Q 008031 158 VPTS 161 (580)
Q Consensus 158 ~p~~ 161 (580)
.+..
T Consensus 170 ~~~~ 173 (350)
T 4ay9_X 170 HNSA 173 (350)
T ss_dssp CTTS
T ss_pred Chhh
Confidence 4433
No 383
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=4.2e-14 Score=127.13 Aligned_cols=109 Identities=24% Similarity=0.315 Sum_probs=98.3
Q ss_pred CCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccc
Q 008031 48 LRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQ 127 (580)
Q Consensus 48 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 127 (580)
-+.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999998 6777664 8999999999999999899999999999999999999977777789999999999999
Q ss_pred cccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 128 NKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 128 N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
|+|++..+..|..+++|+.|+|++|++....+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99997666679999999999999999986544
No 384
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.52 E-value=1.2e-13 Score=143.97 Aligned_cols=138 Identities=25% Similarity=0.365 Sum_probs=104.0
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|+|++|++++ ++.. .++|++|+|++|.+++ +| .|..+++|++|++++|++++ +|..+ .+|++|++++|+
T Consensus 115 ~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~ 184 (454)
T 1jl5_A 115 SLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQ 184 (454)
T ss_dssp EEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSC
T ss_pred EEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCc
Confidence 45566666552 2211 1588999999999885 66 58888999999999998884 55543 588899999998
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCc
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
+++ +| .+..+++|+.|++++|++++ +|.. .++|++|++++|.++ .+| .+..+++|+.|++++|++++.
T Consensus 185 l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l 252 (454)
T 1jl5_A 185 LEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL 252 (454)
T ss_dssp CSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC
T ss_pred CCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc
Confidence 877 34 57888889999999988885 4433 258888888888888 566 488888888888888888863
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.51 E-value=1.3e-13 Score=143.68 Aligned_cols=139 Identities=24% Similarity=0.341 Sum_probs=111.3
Q ss_pred CEEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCC
Q 008031 1 MFLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESN 80 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 80 (580)
++|+|++|.+++ +|.. +++|++|++++|.+++ ++.. .++|++|++++|++++ +| .|.++++|++|++++|
T Consensus 94 ~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 94 ESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNN 163 (454)
T ss_dssp SEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCC
Confidence 367888888885 5543 3789999999999885 3321 2699999999999995 67 5999999999999999
Q ss_pred CCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccCcCccCh
Q 008031 81 NLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
++++ +|.. +.+|++|++++|++++ +| .+..+++|++|++++|.+++ +|... ++|+.|++++|.++ .+|.
T Consensus 164 ~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~ 232 (454)
T 1jl5_A 164 SLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE 232 (454)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC
T ss_pred cCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc
Confidence 9986 4433 3589999999999996 55 58999999999999999985 44432 58999999999998 4553
No 386
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.51 E-value=1.3e-13 Score=148.54 Aligned_cols=112 Identities=26% Similarity=0.377 Sum_probs=71.7
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
+|++++|.|+ .+|..+. ++|+.|+|++|.|+. +|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|+
T Consensus 44 ~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~ 112 (622)
T 3g06_A 44 VLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNP 112 (622)
T ss_dssp EEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCC
T ss_pred EEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCc
Confidence 5778888877 6666555 677788888887773 443 4577777777777777 4444 56677777777777
Q ss_pred CCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCC
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSG 132 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 132 (580)
|++... .+++|+.|++++|+++. +|.. +++|++|+|++|.+++
T Consensus 113 l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 113 LTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp CCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred CCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC
Confidence 765332 34566666666666653 3332 2556666666666553
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=3.2e-16 Score=144.54 Aligned_cols=139 Identities=22% Similarity=0.275 Sum_probs=120.8
Q ss_pred cccCCCCCcEEEccCCccCCCCCc------cccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhh
Q 008031 17 SLGKLSELQEISLSHNKISGVMPS------DLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSL 90 (580)
Q Consensus 17 ~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 90 (580)
.+.....++.++++.|.+++..|. .+..+++|++|+|++|+|++ +| .+..+++|+.|+|++|.++. +|..+
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~ 89 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLD 89 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchh
Confidence 356677888889999999887776 89999999999999999995 67 89999999999999999974 56777
Q ss_pred hccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCccc-ccccCcCCCCeeecccccCcCccCh
Q 008031 91 DKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIP-ASFSNLKSLSSFNVSYNNLSGPVPT 160 (580)
Q Consensus 91 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~l~l~~n~l~~~~p~ 160 (580)
..+++|+.|+|++|++++ +| .+..+++|++|++++|.+++..+ ..+..+++|+.|++++|++++.+|.
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 888999999999999996 44 68889999999999999996433 5789999999999999999877654
No 388
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.46 E-value=3.8e-15 Score=156.29 Aligned_cols=156 Identities=23% Similarity=0.213 Sum_probs=112.5
Q ss_pred CEEEecCCccccc----ccccccCCCCCcEEEccCCccCCCC-----CccccCCCCCCEEEeeCCcCCCC----CCccCc
Q 008031 1 MFLALQYNNLSGR----IPASLGKLSELQEISLSHNKISGVM-----PSDLGRLSRLRILDFSYNAINGS----LPASFS 67 (580)
Q Consensus 1 ~~L~L~~N~i~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-----~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~ 67 (580)
++|+|++|.+++. ++..+..+++|++|+|++|.++... +..+..+++|++|+|++|+|++. ++..+.
T Consensus 202 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 281 (461)
T 1z7x_W 202 EALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR 281 (461)
T ss_dssp CEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH
T ss_pred eEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHh
Confidence 4688999998863 5777888899999999999887432 22333578899999999988843 566677
Q ss_pred CCCCCCEEECcCCCCCcccchhhhcc-----CCCCeeeecccccccc----CCccccCCCCCcEEEccccccCCcccccc
Q 008031 68 NLSSLVSLTLESNNLDDQILDSLDKL-----HNLSVLNLKRNQISGH----IPSTIGNISTLTILDLSQNKLSGEIPASF 138 (580)
Q Consensus 68 ~l~~L~~L~l~~N~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~l 138 (580)
.+++|+.|+|++|.++...+..+... ++|+.|++++|.+++. ++..+..+++|++|+|++|.+++..+..+
T Consensus 282 ~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l 361 (461)
T 1z7x_W 282 AKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361 (461)
T ss_dssp HCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHH
T ss_pred hCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHH
Confidence 78888888888888866555444432 5788888888887754 34556667888888888887775444434
Q ss_pred cC-----cCCCCeeecccccCcC
Q 008031 139 SN-----LKSLSSFNVSYNNLSG 156 (580)
Q Consensus 139 ~~-----l~~L~~l~l~~n~l~~ 156 (580)
.. .++|+.|++++|++++
T Consensus 362 ~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 362 CQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHHcCCCCceEEEECCCCCCCh
Confidence 32 5678888888887774
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.45 E-value=4e-15 Score=156.15 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=130.1
Q ss_pred CEEEecCCccccccccccc-----CCCCCcEEEccCCccCCC----CCccccCCCCCCEEEeeCCcCCCCC-----CccC
Q 008031 1 MFLALQYNNLSGRIPASLG-----KLSELQEISLSHNKISGV----MPSDLGRLSRLRILDFSYNAINGSL-----PASF 66 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~-----~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-----~~~~ 66 (580)
++|+|++|.+++..+..+. .+++|++|+|++|.++.. ++..+..+++|++|+|++|++++.. +..+
T Consensus 173 ~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~ 252 (461)
T 1z7x_W 173 KELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLL 252 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred CEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHh
Confidence 4799999999865555554 367999999999999864 4677888999999999999987432 3334
Q ss_pred cCCCCCCEEECcCCCCCcc----cchhhhccCCCCeeeeccccccccCCccccC-----CCCCcEEEccccccCCc----
Q 008031 67 SNLSSLVSLTLESNNLDDQ----ILDSLDKLHNLSVLNLKRNQISGHIPSTIGN-----ISTLTILDLSQNKLSGE---- 133 (580)
Q Consensus 67 ~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~---- 133 (580)
..+++|+.|+|++|.++.. ++..+..+++|++|++++|.+++..+..+.. .++|++|+|++|.+++.
T Consensus 253 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 332 (461)
T 1z7x_W 253 HPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSH 332 (461)
T ss_dssp STTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred cCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHH
Confidence 4689999999999999875 4666778999999999999997654444433 36999999999999865
Q ss_pred ccccccCcCCCCeeecccccCcCccChhhh
Q 008031 134 IPASFSNLKSLSSFNVSYNNLSGPVPTSLA 163 (580)
Q Consensus 134 ~~~~l~~l~~L~~l~l~~n~l~~~~p~~~~ 163 (580)
++..+..+++|+.|++++|.+++..+..+.
T Consensus 333 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 333 FSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp HHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred HHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 456677889999999999999876555544
No 390
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.40 E-value=7.7e-15 Score=148.55 Aligned_cols=162 Identities=16% Similarity=0.185 Sum_probs=122.0
Q ss_pred CEEEecCCcccccccccccCC-----CCCcEEEccCCccCCCCCcc-ccCCCCCCEEEeeCCcCCCCCCccC-----cCC
Q 008031 1 MFLALQYNNLSGRIPASLGKL-----SELQEISLSHNKISGVMPSD-LGRLSRLRILDFSYNAINGSLPASF-----SNL 69 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~-----~~l 69 (580)
+.|+|++|.|+......+..+ ++|++|+|++|.|+...... ...+++|+.|+|++|+|+......+ ...
T Consensus 75 ~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~ 154 (372)
T 3un9_A 75 RQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQ 154 (372)
T ss_dssp CEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTT
T ss_pred CEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcC
Confidence 479999999996544444333 79999999999987432222 2346789999999999984433333 356
Q ss_pred CCCCEEECcCCCCCccc----chhhhccCCCCeeeeccccccccC----CccccCCCCCcEEEccccccCCc----cccc
Q 008031 70 SSLVSLTLESNNLDDQI----LDSLDKLHNLSVLNLKRNQISGHI----PSTIGNISTLTILDLSQNKLSGE----IPAS 137 (580)
Q Consensus 70 ~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~----~~~~ 137 (580)
++|+.|+|++|.|+... ...+..+++|++|+|++|.|++.. ...+..+++|++|+|++|.+++. +...
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 88999999999997643 334567899999999999997532 45567788999999999999853 3445
Q ss_pred ccCcCCCCeeecccccCcCccChhh
Q 008031 138 FSNLKSLSSFNVSYNNLSGPVPTSL 162 (580)
Q Consensus 138 l~~l~~L~~l~l~~n~l~~~~p~~~ 162 (580)
+...++|++|||++|+|+......+
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHhCCCCCEEeccCCCCCHHHHHHH
Confidence 5667999999999999985544443
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.39 E-value=7.1e-13 Score=132.35 Aligned_cols=158 Identities=15% Similarity=0.172 Sum_probs=109.7
Q ss_pred CEEEecCCccc--------------------ccccccccC--------CCCCcEEEccCCccCCCCCccccCCCCCCEEE
Q 008031 1 MFLALQYNNLS--------------------GRIPASLGK--------LSELQEISLSHNKISGVMPSDLGRLSRLRILD 52 (580)
Q Consensus 1 ~~L~L~~N~i~--------------------~~~~~~~~~--------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 52 (580)
++|||++|+|. .+....|.+ +++|++|+|.+ .++.+.+..|..+++|+.|+
T Consensus 52 ~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~ 130 (329)
T 3sb4_A 52 KVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQ 130 (329)
T ss_dssp CEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEE
T ss_pred eEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEE
Confidence 47899999988 223346777 99999999999 88877788899999999999
Q ss_pred eeCCcCCCCCCccCcC----------------------------------------------------------------
Q 008031 53 FSYNAINGSLPASFSN---------------------------------------------------------------- 68 (580)
Q Consensus 53 l~~n~l~~~~~~~~~~---------------------------------------------------------------- 68 (580)
|++|.+....+..|..
T Consensus 131 l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 210 (329)
T 3sb4_A 131 IRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIE 210 (329)
T ss_dssp BCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEE
T ss_pred cCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEe
Confidence 9999875333333332
Q ss_pred --------------CCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCc-EEEccccccCCc
Q 008031 69 --------------LSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLT-ILDLSQNKLSGE 133 (580)
Q Consensus 69 --------------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~ 133 (580)
+++|+.|+|++|+++.+....|..+.+|+.|+|.+| ++.+.+..|..+.+|+ .|+|.+ .++..
T Consensus 211 ~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I 288 (329)
T 3sb4_A 211 GKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAI 288 (329)
T ss_dssp ECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEE
T ss_pred eeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEE
Confidence 456677777777776666666777777777777666 6555566667777776 777766 55545
Q ss_pred ccccccCcCCCCeeecccccCcCccChh
Q 008031 134 IPASFSNLKSLSSFNVSYNNLSGPVPTS 161 (580)
Q Consensus 134 ~~~~l~~l~~L~~l~l~~n~l~~~~p~~ 161 (580)
.+..|.++++|+.|+++.|+++...+..
T Consensus 289 ~~~aF~~c~~L~~l~l~~n~i~~I~~~a 316 (329)
T 3sb4_A 289 EFGAFMGCDNLRYVLATGDKITTLGDEL 316 (329)
T ss_dssp CTTTTTTCTTEEEEEECSSCCCEECTTT
T ss_pred chhhhhCCccCCEEEeCCCccCccchhh
Confidence 5566777777777777667666443333
No 392
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=1e-12 Score=132.29 Aligned_cols=104 Identities=22% Similarity=0.186 Sum_probs=64.3
Q ss_pred cEEEccCC-ccCCCCCccccCCCCCCEEEeeC-CcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeec
Q 008031 25 QEISLSHN-KISGVMPSDLGRLSRLRILDFSY-NAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLK 102 (580)
Q Consensus 25 ~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 102 (580)
..++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|..|++|+.|+|++|+|++..+..|..|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 34566666 666 3455 66666666666664 66665555566666666666666666666666666666666666666
Q ss_pred cccccccCCccccCCCCCcEEEccccccC
Q 008031 103 RNQISGHIPSTIGNISTLTILDLSQNKLS 131 (580)
Q Consensus 103 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 131 (580)
+|+|++..+..+..++ |+.|+|++|.+.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 6666644444444433 666666666665
No 393
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=3.5e-12 Score=128.30 Aligned_cols=108 Identities=23% Similarity=0.240 Sum_probs=97.6
Q ss_pred CEEEeeCC-cCCCCCCccCcCCCCCCEEECcC-CCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEcc
Q 008031 49 RILDFSYN-AINGSLPASFSNLSSLVSLTLES-NNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLS 126 (580)
Q Consensus 49 ~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 126 (580)
..++++++ +|+ .+|. |..+++|+.|+|++ |.|++..+..|..|++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45799998 899 6788 99999999999996 99999888999999999999999999999999999999999999999
Q ss_pred ccccCCcccccccCcCCCCeeecccccCcCccC
Q 008031 127 QNKLSGEIPASFSNLKSLSSFNVSYNNLSGPVP 159 (580)
Q Consensus 127 ~N~l~~~~~~~l~~l~~L~~l~l~~n~l~~~~p 159 (580)
+|+|++..+..|..++ |+.|+|.+|+|.....
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 9999977666777776 9999999999986544
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.26 E-value=1.7e-11 Score=122.26 Aligned_cols=103 Identities=16% Similarity=0.098 Sum_probs=94.4
Q ss_pred CCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCC-eeeeccccccccCCccccCCCCCcEE
Q 008031 45 LSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLS-VLNLKRNQISGHIPSTIGNISTLTIL 123 (580)
Q Consensus 45 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L 123 (580)
+++|+.|+|++|+++...+..|.++.+|+.|+|++| ++.+....|..+.+|+ .|++.+ +++.+.+..|..|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 679999999999999777778999999999999998 8888888999999999 999999 7887888899999999999
Q ss_pred EccccccCCcccccccCcCCCCeeec
Q 008031 124 DLSQNKLSGEIPASFSNLKSLSSFNV 149 (580)
Q Consensus 124 ~l~~N~l~~~~~~~l~~l~~L~~l~l 149 (580)
++++|.++...+..|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99999999777789999999999874
No 395
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=1.3e-11 Score=119.03 Aligned_cols=136 Identities=17% Similarity=0.122 Sum_probs=105.3
Q ss_pred hhccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCC-CCcceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 291 TAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 291 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
....++.|+.+.||++... ++.+++|............+.+|+++++.+. +..+.++++++.. .+..++||||++|.
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~lv~e~i~G~ 95 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGWSNLLMSEADGV 95 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEEEEECCSSE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-CCceEEEEEecCCe
Confidence 4456777888999999765 6899999986543233456889999999884 6778888888875 56889999999999
Q ss_pred ChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 008031 370 SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN------------------------------------------- 406 (580)
Q Consensus 370 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~------------------------------------------- 406 (580)
+|.+.+.. ......++.+++++++.||+.
T Consensus 96 ~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 96 LCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred ehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 98876321 122346788999999999971
Q ss_pred ---------------CCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 407 ---------------ENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 407 ---------------~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
..++|+|+++.||+++++..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 248999999999999876556799999764
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=7.1e-13 Score=134.12 Aligned_cols=154 Identities=20% Similarity=0.199 Sum_probs=112.1
Q ss_pred EEEecCCcccccccccc-cCCCCCcEEEccCCccCCCCCccc-----cCCCCCCEEEeeCCcCCC----CCCccCcCCCC
Q 008031 2 FLALQYNNLSGRIPASL-GKLSELQEISLSHNKISGVMPSDL-----GRLSRLRILDFSYNAING----SLPASFSNLSS 71 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~ 71 (580)
+|+|++|.|++.....+ ..+++|+.|+|++|.|+......+ ...++|++|+|++|.|+. .++..+..+++
T Consensus 105 ~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~ 184 (372)
T 3un9_A 105 EVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTS 184 (372)
T ss_dssp EEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSS
T ss_pred EEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCC
Confidence 69999999986544443 346789999999999984433333 356899999999999974 34455678899
Q ss_pred CCEEECcCCCCCccc----chhhhccCCCCeeeecccccccc----CCccccCCCCCcEEEccccccCCcccccccCcCC
Q 008031 72 LVSLTLESNNLDDQI----LDSLDKLHNLSVLNLKRNQISGH----IPSTIGNISTLTILDLSQNKLSGEIPASFSNLKS 143 (580)
Q Consensus 72 L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 143 (580)
|++|+|++|.|+... ...+..+++|+.|+|++|.|++. +...+..+++|++|+|++|.|++.....+..+..
T Consensus 185 L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~ 264 (372)
T 3un9_A 185 VTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGG 264 (372)
T ss_dssp CCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC-
T ss_pred cCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhc
Confidence 999999999997643 45567788999999999999863 3344556799999999999998654544544321
Q ss_pred -----CCeee--cccccCc
Q 008031 144 -----LSSFN--VSYNNLS 155 (580)
Q Consensus 144 -----L~~l~--l~~n~l~ 155 (580)
|+.+. +..|.+.
T Consensus 265 ~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 265 AAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp -----CEEECCCC----CH
T ss_pred CCCccchhhHhhhcCCccC
Confidence 55555 5556554
No 397
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.12 E-value=9.2e-12 Score=134.81 Aligned_cols=139 Identities=17% Similarity=0.116 Sum_probs=76.5
Q ss_pred cCCCCCcEEEccCCccCCCCCccccC-CCCCCEEEee----CCcCCCC-----CCccCcCCCCCCEEECcCC--CCCccc
Q 008031 19 GKLSELQEISLSHNKISGVMPSDLGR-LSRLRILDFS----YNAINGS-----LPASFSNLSSLVSLTLESN--NLDDQI 86 (580)
Q Consensus 19 ~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~----~n~l~~~-----~~~~~~~l~~L~~L~l~~N--~l~~~~ 86 (580)
..+++|++|+++.|.+++..+..+.. +++|+.|+|+ .|++++. ++..+..+++|+.|+|++| .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 34566666666666555443334433 5666666664 4555532 2222445666666666532 255444
Q ss_pred chhhhc-cCCCCeeeecccccccc-CCccccCCCCCcEEEccccccCCc-ccccccCcCCCCeeecccccCcCc
Q 008031 87 LDSLDK-LHNLSVLNLKRNQISGH-IPSTIGNISTLTILDLSQNKLSGE-IPASFSNLKSLSSFNVSYNNLSGP 157 (580)
Q Consensus 87 ~~~~~~-l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~l~l~~n~l~~~ 157 (580)
...+.. +++|+.|+|++|++++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|++++|+++..
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 444433 66677777777666542 233345566677777777766543 233344566777777777766643
No 398
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=1.2e-10 Score=111.80 Aligned_cols=126 Identities=15% Similarity=0.201 Sum_probs=93.9
Q ss_pred cccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCc--ceeeeeEEECCCCcEEEEEeeCCCCChhh
Q 008031 296 GKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPN--LLALRAYYLGPKGEKLLVFDYMPHGSLAT 373 (580)
Q Consensus 296 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~~lv~e~~~~g~L~~ 373 (580)
+.|..+.||++...+|+.+++|..... ....+.+|+.+++.+.+.+ +.+++++... .+..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-AGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-SSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-CCCCEEEEEecCCcccC-
Confidence 356669999998777888999987543 2245788999999885444 5568887765 45789999999998884
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC----------------------------------------------
Q 008031 374 FLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNE---------------------------------------------- 407 (580)
Q Consensus 374 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------------- 407 (580)
... .+ ...++.++++.++.||+..
T Consensus 104 -~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 104 -SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp -TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred -cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 211 11 2356777888888888631
Q ss_pred -----------CcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 408 -----------NIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 408 -----------~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
+++|+|++|.||++++++.+.|+|||.+.
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 29999999999999876656799999864
No 399
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.05 E-value=4e-10 Score=113.77 Aligned_cols=140 Identities=15% Similarity=0.241 Sum_probs=104.7
Q ss_pred hccccccCceEEEEEEeCCCCEEEEEEcc--ccc-cccHHHHHHHHHHHhcCC--CCcceeeeeEEECCC--CcEEEEEe
Q 008031 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLR--EKI-TKGQREFESEVSLLGKIR--HPNLLALRAYYLGPK--GEKLLVFD 364 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~--~~~~lv~e 364 (580)
.+.++.|.++.||+.... +..+++|+.. ... ......+.+|+.+++.+. +..+.+++.++.+.. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 356899999999999876 4678888775 322 123346888999999986 456788888886532 45899999
Q ss_pred eCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 008031 365 YMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN-------------------------------------- 406 (580)
Q Consensus 365 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------------------------------------- 406 (580)
|++|..+.+.. ...++..++..++.+++++|+.||+.
T Consensus 122 ~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 122 FVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred ecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99998775422 12367788889999999999999961
Q ss_pred -------------------CCcccCCCCCCCeeeCCCCC--eEEeecccccc
Q 008031 407 -------------------ENIIHGNLTSSNVLLDDSTN--AKISDFGLSRL 437 (580)
Q Consensus 407 -------------------~~i~H~Dlk~~Nil~~~~~~--~kl~Dfg~~~~ 437 (580)
.+++|+|+++.||+++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 36899999999999997653 68999998864
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.02 E-value=1.1e-10 Score=126.24 Aligned_cols=126 Identities=11% Similarity=0.066 Sum_probs=77.2
Q ss_pred CEEEecCCcccccccccccCC-C-CCcEEEccCCc-cCC-CCCccccCCCCCCEEEeeCCcCCCC----CCccCcCCCCC
Q 008031 1 MFLALQYNNLSGRIPASLGKL-S-ELQEISLSHNK-ISG-VMPSDLGRLSRLRILDFSYNAINGS----LPASFSNLSSL 72 (580)
Q Consensus 1 ~~L~L~~N~i~~~~~~~~~~l-~-~L~~L~l~~n~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L 72 (580)
++|+|++|.+++..+..+..+ + +|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 467888887776666556553 3 37777777775 220 1122233567777777777776644 23334566777
Q ss_pred CEEECcCCCCCc----ccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccc
Q 008031 73 VSLTLESNNLDD----QILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQ 127 (580)
Q Consensus 73 ~~L~l~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 127 (580)
+.|+|++|.+++ ..+..+..+++|+.|++++|.+.+ ++..+..+++|+.|+++.
T Consensus 195 ~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred cEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 777777777762 333445567777777777777664 444555556666665553
No 401
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.94 E-value=2.3e-10 Score=123.76 Aligned_cols=124 Identities=15% Similarity=0.175 Sum_probs=68.7
Q ss_pred EEEecCCccccccccccc-CCCCCcEEEccCC-ccCCC-CCccccCCCCCCEEEeeCCcCCCCCCccC----cCCCCCCE
Q 008031 2 FLALQYNNLSGRIPASLG-KLSELQEISLSHN-KISGV-MPSDLGRLSRLRILDFSYNAINGSLPASF----SNLSSLVS 74 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~-~l~~L~~L~l~~n-~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~----~~l~~L~~ 74 (580)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+ ..+++|+.
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 566777766655555554 5667777777766 34321 23334456777777777777654333222 25557777
Q ss_pred EECcCCC--CCcc-cchhhhccCCCCeeeeccc-cccccCCccccCCCCCcEEEcc
Q 008031 75 LTLESNN--LDDQ-ILDSLDKLHNLSVLNLKRN-QISGHIPSTIGNISTLTILDLS 126 (580)
Q Consensus 75 L~l~~N~--l~~~-~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~l~ 126 (580)
|+|++|. ++.. ....+..+++|+.|++++| .+++ ++..+..+++|+.|+++
T Consensus 189 L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~ 243 (594)
T 2p1m_B 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTG 243 (594)
T ss_dssp EECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECS
T ss_pred EEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccc
Confidence 7777765 3211 1112234567777777766 3332 44445555555555543
No 402
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.91 E-value=1.1e-10 Score=126.19 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=39.8
Q ss_pred cCCCCCCEEECcCCCCCcccchhhhc-cCCCCeeeeccccccccCCccc-cCCCCCcEEEccccccCCcccc-cccCcCC
Q 008031 67 SNLSSLVSLTLESNNLDDQILDSLDK-LHNLSVLNLKRNQISGHIPSTI-GNISTLTILDLSQNKLSGEIPA-SFSNLKS 143 (580)
Q Consensus 67 ~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~-~l~~l~~ 143 (580)
..+++|+.|+|++ .++......+.. +++|+.|+|++|.+++.....+ ..+++|++|+|++|.+++.... .+..+++
T Consensus 429 ~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~ 507 (594)
T 2p1m_B 429 EHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLET 507 (594)
T ss_dssp HHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGG
T ss_pred hhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCC
Confidence 3444555555544 444433333333 4555555555555543322222 3345555555555555332221 2233455
Q ss_pred CCeeecccccC
Q 008031 144 LSSFNVSYNNL 154 (580)
Q Consensus 144 L~~l~l~~n~l 154 (580)
|+.|++++|++
T Consensus 508 L~~L~l~~~~~ 518 (594)
T 2p1m_B 508 MRSLWMSSCSV 518 (594)
T ss_dssp SSEEEEESSCC
T ss_pred CCEEeeeCCCC
Confidence 55555555554
No 403
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.89 E-value=4.4e-10 Score=110.64 Aligned_cols=184 Identities=18% Similarity=0.218 Sum_probs=117.1
Q ss_pred ccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcC-CCCc--ceeeeeEEECCC--CcEEEEEeeCC
Q 008031 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKI-RHPN--LLALRAYYLGPK--GEKLLVFDYMP 367 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~~~~~~~~~~--~~~~lv~e~~~ 367 (580)
+.++.|.+..||+.. ..+++|+.... .....+.+|+++++.+ .+.. +.+.+....... ...|+|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 568999999999863 56888885432 2345788999999887 3333 334444432211 13478999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN----------------------------------------- 406 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~----------------------------------------- 406 (580)
|.++.+.... .++..++..++.++++.++.||+.
T Consensus 100 G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9888754322 356667777788888877777741
Q ss_pred ----------------CCcccCCCCCCCeeeCC--CCCeEEeecccccccccccccceee-------------ecCcccc
Q 008031 407 ----------------ENIIHGNLTSSNVLLDD--STNAKISDFGLSRLMTAAANVNVIA-------------TAGALGY 455 (580)
Q Consensus 407 ----------------~~i~H~Dlk~~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~-------------~~g~~~y 455 (580)
..++|+|+++.||++++ ...+.|+||+.+..-.......... ....++.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 24799999999999997 4557899999876432211100000 0000011
Q ss_pred CC-ccccccCCCCCcccchhHHHHHHHHHcCCCCC
Q 008031 456 RA-PELSKLKKANTKTDVYSLGVTILELLTGKSPG 489 (580)
Q Consensus 456 ~a-PE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~ 489 (580)
.. |+.... .....+.|+++.++|.+.+|+.+|
T Consensus 255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11 221110 112258999999999999998775
No 404
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.88 E-value=8e-09 Score=105.34 Aligned_cols=145 Identities=10% Similarity=0.151 Sum_probs=97.1
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC
Q 008031 2 FLALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN 81 (580)
Q Consensus 2 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 81 (580)
.++|++|+++.+....|. +.+|+.+.|.++ ++.+....|..+++|+.|+|..| ++..-...|.+ .+|+.+.| .|+
T Consensus 184 ~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~ 258 (401)
T 4fdw_A 184 KADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNG 258 (401)
T ss_dssp EEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETT
T ss_pred eeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCC
Confidence 578888888843334444 678888888754 66566778888888888888764 45344455655 56777777 455
Q ss_pred CCcccchhhhccCCCCeeeecccccc-----ccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccc
Q 008031 82 LDDQILDSLDKLHNLSVLNLKRNQIS-----GHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYN 152 (580)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~l~~N~l~-----~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n 152 (580)
++.+....|..+.+|+.+++.+|.+. .+.+..|..|++|+.++|. |.++......|.++++|+.+++..|
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 66666667777777777777766654 3455567777777777777 3455455566777777777777444
No 405
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.83 E-value=2e-08 Score=102.45 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=80.0
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCC
Q 008031 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82 (580)
Q Consensus 3 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 82 (580)
++|..| |+.+-..+|.++ +|+.++|.+ .++.+.+..|..+++|+.++|++|+++......|. +.+|+.+.|.+| +
T Consensus 140 i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l 214 (401)
T 4fdw_A 140 VVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-L 214 (401)
T ss_dssp EECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-C
T ss_pred EEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-h
Confidence 444444 443444455553 566666664 45545556666667777777766666633333444 466666666633 5
Q ss_pred CcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccccC
Q 008031 83 DDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYNNL 154 (580)
Q Consensus 83 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n~l 154 (580)
+.+....|..+.+|+.+++..| ++.+....|.. .+|+.+.| .|.++......|.++++|+.+++.+|.+
T Consensus 215 ~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 215 KEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp CEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred heehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccc
Confidence 5555566666666666666653 44344444444 45666666 3334434445556666666666555544
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.76 E-value=3.4e-09 Score=106.18 Aligned_cols=137 Identities=16% Similarity=0.184 Sum_probs=68.0
Q ss_pred ccccCCCCCcEEEccCCccC---------CCCCccccCCCCCCEEEeeCCc-CCCCCCccCcCCCCCCEEECcCCCCCcc
Q 008031 16 ASLGKLSELQEISLSHNKIS---------GVMPSDLGRLSRLRILDFSYNA-INGSLPASFSNLSSLVSLTLESNNLDDQ 85 (580)
Q Consensus 16 ~~~~~l~~L~~L~l~~n~l~---------~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 85 (580)
.++..+++|+.|.+..+... +.++..+..+|+|+.|+|++|. +. ++. +. +++|+.|+|..|.++..
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChH
Confidence 34445566666666544321 1133344556666666666653 22 222 22 56666666666666544
Q ss_pred cchhhh--ccCCCCeeeecc--cccccc-----CCccc--cCCCCCcEEEccccccCCccccccc---CcCCCCeeeccc
Q 008031 86 ILDSLD--KLHNLSVLNLKR--NQISGH-----IPSTI--GNISTLTILDLSQNKLSGEIPASFS---NLKSLSSFNVSY 151 (580)
Q Consensus 86 ~~~~~~--~l~~L~~L~l~~--N~l~~~-----~~~~~--~~l~~L~~L~l~~N~l~~~~~~~l~---~l~~L~~l~l~~ 151 (580)
....+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|.+|.+++..+..+. .+++|+.|+|+.
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISA 288 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCS
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCC
Confidence 333343 466666666642 111110 00111 2356666666666666533222222 355666666666
Q ss_pred ccCcC
Q 008031 152 NNLSG 156 (580)
Q Consensus 152 n~l~~ 156 (580)
|.+.+
T Consensus 289 n~L~d 293 (362)
T 2ra8_A 289 GVLTD 293 (362)
T ss_dssp SCCBH
T ss_pred CCCCh
Confidence 66654
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.73 E-value=1.3e-09 Score=98.62 Aligned_cols=115 Identities=15% Similarity=0.215 Sum_probs=72.3
Q ss_pred cccCCCCCCEEEeeCC-cCCC----CCCccCcCCCCCCEEECcCCCCCccc----chhhhccCCCCeeeecccccccc--
Q 008031 41 DLGRLSRLRILDFSYN-AING----SLPASFSNLSSLVSLTLESNNLDDQI----LDSLDKLHNLSVLNLKRNQISGH-- 109 (580)
Q Consensus 41 ~~~~l~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~-- 109 (580)
.+...++|++|+|++| .|.. .+...+...++|++|+|++|.|+... ...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4445566666666666 6652 22334455566777777777775432 22344456777777777777643
Q ss_pred --CCccccCCCCCcEEEc--cccccCCc----ccccccCcCCCCeeecccccCc
Q 008031 110 --IPSTIGNISTLTILDL--SQNKLSGE----IPASFSNLKSLSSFNVSYNNLS 155 (580)
Q Consensus 110 --~~~~~~~l~~L~~L~l--~~N~l~~~----~~~~l~~l~~L~~l~l~~n~l~ 155 (580)
+...+...++|++|+| ++|.++.. +...+...++|+.|++++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3445666677888888 77887753 3345556688888888888875
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.70 E-value=3.8e-09 Score=95.57 Aligned_cols=119 Identities=16% Similarity=0.192 Sum_probs=93.5
Q ss_pred cccccccCCCCCcEEEccCC-ccCCC----CCccccCCCCCCEEEeeCCcCCC----CCCccCcCCCCCCEEECcCCCCC
Q 008031 13 RIPASLGKLSELQEISLSHN-KISGV----MPSDLGRLSRLRILDFSYNAING----SLPASFSNLSSLVSLTLESNNLD 83 (580)
Q Consensus 13 ~~~~~~~~l~~L~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~N~l~ 83 (580)
.+...+...++|++|+|++| .|... +...+...++|++|+|++|+|+. .+...+...++|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34556778899999999999 88732 34566678999999999999974 23445666789999999999998
Q ss_pred ccc----chhhhccCCCCeeee--cccccccc----CCccccCCCCCcEEEccccccC
Q 008031 84 DQI----LDSLDKLHNLSVLNL--KRNQISGH----IPSTIGNISTLTILDLSQNKLS 131 (580)
Q Consensus 84 ~~~----~~~~~~l~~L~~L~l--~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 131 (580)
... ...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 643 445667789999999 88999764 3344566689999999999986
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.66 E-value=2.6e-09 Score=101.58 Aligned_cols=80 Identities=28% Similarity=0.363 Sum_probs=50.0
Q ss_pred cCCCCCCEEECcCCCCCcc--cchhhhccCCCCeeeeccccccccCCccccCCC--CCcEEEccccccCCccc-------
Q 008031 67 SNLSSLVSLTLESNNLDDQ--ILDSLDKLHNLSVLNLKRNQISGHIPSTIGNIS--TLTILDLSQNKLSGEIP------- 135 (580)
Q Consensus 67 ~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~------- 135 (580)
.++++|+.|+|++|+|++. ++..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+..|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 3466677777777777662 334556677777777777777644 2233333 77777777777765443
Q ss_pred ccccCcCCCCeee
Q 008031 136 ASFSNLKSLSSFN 148 (580)
Q Consensus 136 ~~l~~l~~L~~l~ 148 (580)
..+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2356677777765
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.64 E-value=3.5e-08 Score=98.84 Aligned_cols=140 Identities=19% Similarity=0.270 Sum_probs=99.3
Q ss_pred ccccccCCCCCcEEEccCCc-cCCCCCccccCCCCCCEEEeeCCcCCCCCCccCc--CCCCCCEEECcC--CCCCcc---
Q 008031 14 IPASLGKLSELQEISLSHNK-ISGVMPSDLGRLSRLRILDFSYNAINGSLPASFS--NLSSLVSLTLES--NNLDDQ--- 85 (580)
Q Consensus 14 ~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~--N~l~~~--- 85 (580)
+...+..+|+|++|+|++|. +. ++. + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...+.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~ 239 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDM 239 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCG
T ss_pred HHHHHhcCCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhH
Confidence 44566788999999999884 33 333 4 389999999999998743323333 689999999863 222111
Q ss_pred --cchhh--hccCCCCeeeeccccccccCCcccc---CCCCCcEEEccccccCCc----ccccccCcCCCCeeecccccC
Q 008031 86 --ILDSL--DKLHNLSVLNLKRNQISGHIPSTIG---NISTLTILDLSQNKLSGE----IPASFSNLKSLSSFNVSYNNL 154 (580)
Q Consensus 86 --~~~~~--~~l~~L~~L~l~~N~l~~~~~~~~~---~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~l~l~~n~l 154 (580)
+...+ ..+++|+.|+|.+|.+.+..+..+. .+++|++|+|+.|.+++. ++..+.++++|+.|++++|.+
T Consensus 240 ~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 240 NVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp GGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred HHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 11122 2478999999999998753333332 478999999999999863 344456789999999999998
Q ss_pred cCc
Q 008031 155 SGP 157 (580)
Q Consensus 155 ~~~ 157 (580)
+..
T Consensus 320 ~d~ 322 (362)
T 2ra8_A 320 SDE 322 (362)
T ss_dssp CHH
T ss_pred CHH
Confidence 744
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.59 E-value=1.5e-08 Score=96.33 Aligned_cols=105 Identities=23% Similarity=0.274 Sum_probs=72.5
Q ss_pred ccCCCCCcE--EEccCCccC---CCCCccccCCCCCCEEEeeCCcCCC--CCCccCcCCCCCCEEECcCCCCCcccchhh
Q 008031 18 LGKLSELQE--ISLSHNKIS---GVMPSDLGRLSRLRILDFSYNAING--SLPASFSNLSSLVSLTLESNNLDDQILDSL 90 (580)
Q Consensus 18 ~~~l~~L~~--L~l~~n~l~---~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 90 (580)
|...+.|.. ++++.|... ..++.....+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 555555665 677777543 2222223457888888888888886 3445666788888888888888765 334
Q ss_pred hccC--CCCeeeeccccccccCCc-------cccCCCCCcEEE
Q 008031 91 DKLH--NLSVLNLKRNQISGHIPS-------TIGNISTLTILD 124 (580)
Q Consensus 91 ~~l~--~L~~L~l~~N~l~~~~~~-------~~~~l~~L~~L~ 124 (580)
..+. +|++|+|++|.+.+.+|+ .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 888899999988876653 366788888876
No 412
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.56 E-value=1e-07 Score=94.27 Aligned_cols=130 Identities=12% Similarity=0.159 Sum_probs=93.7
Q ss_pred hccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCC----CcceeeeeEEECCCCcEEEEEeeCC
Q 008031 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRH----PNLLALRAYYLGPKGEKLLVFDYMP 367 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~~lv~e~~~ 367 (580)
.+.++.|..+.||+. |..+++|+..... ....+.+|+++++.+.+ ..+.+++++ +..++||||++
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-----~~~~lvme~i~ 110 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ-----SDRFNIMKYIK 110 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----CSSCEEEECCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec-----CCcEEEEeecC
Confidence 467899999999998 6778888764321 23458899999888865 223444444 35689999999
Q ss_pred CCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 008031 368 HGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN----------------------------------------- 406 (580)
Q Consensus 368 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~----------------------------------------- 406 (580)
|.++.+.... .++..+...++.++++.++.||+.
T Consensus 111 G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 111 GERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp CBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred Cccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 9888743321 245566667777777777777742
Q ss_pred ---------------------CCcccCCCCCCCeeeCCCCCeEEeecccccc
Q 008031 407 ---------------------ENIIHGNLTSSNVLLDDSTNAKISDFGLSRL 437 (580)
Q Consensus 407 ---------------------~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~ 437 (580)
..++|+|+++.||+++.+..+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 1349999999999999866579999998754
No 413
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.52 E-value=5.9e-07 Score=87.06 Aligned_cols=76 Identities=17% Similarity=0.252 Sum_probs=60.3
Q ss_pred hccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCC---cceeeeeEEECCCCcEEEEEeeCCC
Q 008031 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHP---NLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
.+.|+.|.++.||++...+|+.+++|+...........+.+|++.|+.+.+. .+.+++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~-----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec-----CcEEEEEeccc
Confidence 3678999999999999888999999996543333346789999999999765 567777653 36899999999
Q ss_pred CChh
Q 008031 369 GSLA 372 (580)
Q Consensus 369 g~L~ 372 (580)
+++.
T Consensus 95 ~~~~ 98 (288)
T 3d1u_A 95 RPPT 98 (288)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8753
No 414
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.50 E-value=7e-07 Score=87.59 Aligned_cols=134 Identities=16% Similarity=0.182 Sum_probs=90.3
Q ss_pred ccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCC---cceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHP---NLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
+.++.|....||+. |..+++|+... ......+.+|+++|+.+.+. .+.+.+.++....+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 56788999999988 56788887432 22345788999999999642 35666666654456789999999998
Q ss_pred ChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc--------------------------------------------
Q 008031 370 SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHS-------------------------------------------- 405 (580)
Q Consensus 370 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-------------------------------------------- 405 (580)
++.+..-. .++..+...++.++++.|+.||+
T Consensus 99 ~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 87653211 12333333444444444444432
Q ss_pred ---------------CCCcccCCCCCCCeeeCC---CCCe-EEeecccccc
Q 008031 406 ---------------NENIIHGNLTSSNVLLDD---STNA-KISDFGLSRL 437 (580)
Q Consensus 406 ---------------~~~i~H~Dlk~~Nil~~~---~~~~-kl~Dfg~~~~ 437 (580)
...++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 135699999999999987 4554 8999997753
No 415
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.34 E-value=1.2e-06 Score=87.98 Aligned_cols=75 Identities=4% Similarity=-0.050 Sum_probs=56.3
Q ss_pred hccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCC--cceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHP--NLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
.+.++.|....+|+... +|..+++|..... ..+.+|+.+++.+... .+.+++.++....+..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 35688999999999876 4788999976432 3588899999888643 35667777765446789999999986
Q ss_pred Chh
Q 008031 370 SLA 372 (580)
Q Consensus 370 ~L~ 372 (580)
++.
T Consensus 120 ~l~ 122 (362)
T 3ovc_A 120 TLQ 122 (362)
T ss_dssp ETT
T ss_pred Ccc
Confidence 654
No 416
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.34 E-value=1.7e-06 Score=83.13 Aligned_cols=132 Identities=16% Similarity=0.207 Sum_probs=91.0
Q ss_pred cccccCce-EEEEEEeC-CCCEEEEEEccccccccHHHHHHHHHHHhcCC-CCcceeeeeEEECCCCcEEEEEeeCCCCC
Q 008031 294 IMGKSTYG-TVYKATLE-DGSQVAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGPKGEKLLVFDYMPHGS 370 (580)
Q Consensus 294 ~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~e~~~~g~ 370 (580)
.+..|..| .||+.... ++..+++|+-... ....+.+|+..|+.+. +--+.++++++.+ .+..++|||+++|.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-PDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-CCeEEEEEEeeCCcc
Confidence 44556665 68988765 5667889875433 2346788999998884 4446777888776 568899999999988
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------------------------------------------
Q 008031 371 LATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSN-------------------------------------------- 406 (580)
Q Consensus 371 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------------------------------------------- 406 (580)
+.+..... ......++.+++..|+-||+.
T Consensus 107 ~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 107 AFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 77654321 112233445555555555510
Q ss_pred -------------CCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 407 -------------ENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 407 -------------~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
..++|+|+.+.||++++++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 137899999999999987666799999774
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.28 E-value=1.7e-06 Score=86.92 Aligned_cols=81 Identities=6% Similarity=0.008 Sum_probs=56.1
Q ss_pred ccc-cccCceEEEEEEeC-------CCCEEEEEEccccc---cccHHHHHHHHHHHhcCC-C--CcceeeeeEEECCC--
Q 008031 293 EIM-GKSTYGTVYKATLE-------DGSQVAVKRLREKI---TKGQREFESEVSLLGKIR-H--PNLLALRAYYLGPK-- 356 (580)
Q Consensus 293 ~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~-- 356 (580)
+.| +.|....+|+.... ++..+++|...... ......+.+|+.+++.+. + ..+.+++.++.+..
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88889999998764 26678898765432 111245778888888884 3 35677777775432
Q ss_pred CcEEEEEeeCCCCChhh
Q 008031 357 GEKLLVFDYMPHGSLAT 373 (580)
Q Consensus 357 ~~~~lv~e~~~~g~L~~ 373 (580)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35789999999877654
No 418
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.19 E-value=8.7e-07 Score=78.01 Aligned_cols=84 Identities=14% Similarity=0.171 Sum_probs=55.0
Q ss_pred CCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCC-CCcccchhhhcc----CCCCeeeecccc-ccccCCccccCCCC
Q 008031 46 SRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNN-LDDQILDSLDKL----HNLSVLNLKRNQ-ISGHIPSTIGNIST 119 (580)
Q Consensus 46 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l----~~L~~L~l~~N~-l~~~~~~~~~~l~~ 119 (580)
.+|+.|||+++.|+..--..+..+++|+.|+|++|. |+...-..+..+ ++|++|+|++|. |++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777765444456677777777777774 666555555553 367777777764 66544445666777
Q ss_pred CcEEEccccc
Q 008031 120 LTILDLSQNK 129 (580)
Q Consensus 120 L~~L~l~~N~ 129 (580)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.11 E-value=9.4e-07 Score=77.78 Aligned_cols=92 Identities=8% Similarity=0.113 Sum_probs=74.2
Q ss_pred CccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeecccc-ccccCCccccCC----CCCcEEEccccc-cCCcccc
Q 008031 63 PASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQ-ISGHIPSTIGNI----STLTILDLSQNK-LSGEIPA 136 (580)
Q Consensus 63 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l----~~L~~L~l~~N~-l~~~~~~ 136 (580)
|.....-.+|+.|+|+++.|+......+..+++|+.|+|++|. |++..-..+..+ ++|++|+|++|. +|+.--.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4333333579999999999998877888999999999999995 776554556654 479999999985 8876566
Q ss_pred cccCcCCCCeeecccccC
Q 008031 137 SFSNLKSLSSFNVSYNNL 154 (580)
Q Consensus 137 ~l~~l~~L~~l~l~~n~l 154 (580)
.+..+++|+.|++++++-
T Consensus 134 ~L~~~~~L~~L~L~~c~~ 151 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLPG 151 (176)
T ss_dssp HGGGCTTCCEEEEESCTT
T ss_pred HHhcCCCCCEEECCCCCC
Confidence 788999999999999863
No 420
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.08 E-value=8.4e-06 Score=82.98 Aligned_cols=109 Identities=11% Similarity=0.185 Sum_probs=48.7
Q ss_pred ccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCC
Q 008031 40 SDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNIST 119 (580)
Q Consensus 40 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 119 (580)
..|..+.+|+.+.+.++..+ .....|.++.+|+.+.+. +.++.+....|..+.+|+.+.|..+ ++.+....|..|.+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 34444445555554433322 333344445555555543 3333444444444555555554432 33333444445555
Q ss_pred CcEEEccccccCCcccccccCcCCCCeeecccc
Q 008031 120 LTILDLSQNKLSGEIPASFSNLKSLSSFNVSYN 152 (580)
Q Consensus 120 L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n 152 (580)
|+.+.|..+ ++......|.++++|+.+++.+|
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 555555332 33233344555555555554444
No 421
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.04 E-value=1.7e-05 Score=80.80 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=49.0
Q ss_pred hccccccCceEEEEEEeC-CCCEEEEEEcccccc-------ccHHHHHHHHHHHhcCCC--Ccc-eeeeeEEECCCCcEE
Q 008031 292 AEIMGKSTYGTVYKATLE-DGSQVAVKRLREKIT-------KGQREFESEVSLLGKIRH--PNL-LALRAYYLGPKGEKL 360 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~ni-v~~~~~~~~~~~~~~ 360 (580)
.+.+|.|.++.||++... +++.++||....... .....+..|+++++.+.. +.. .+++.+. .+..+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d---~~~~~ 111 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD---TEMAV 111 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE---TTTTE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc---CCccE
Confidence 367899999999999765 478899998653221 123456778888887732 333 4455432 33568
Q ss_pred EEEeeCCCC
Q 008031 361 LVFDYMPHG 369 (580)
Q Consensus 361 lv~e~~~~g 369 (580)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999764
No 422
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.96 E-value=1.3e-05 Score=79.78 Aligned_cols=139 Identities=17% Similarity=0.276 Sum_probs=76.9
Q ss_pred ccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCC-----CCcceeee-e-EEECCCCcEEEEEee
Q 008031 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIR-----HPNLLALR-A-YYLGPKGEKLLVFDY 365 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~-~-~~~~~~~~~~lv~e~ 365 (580)
+.|+.|..+.||+....+| .+++|+.... ...+..|+.+++.+. .|.++... | .+....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4466677899999987654 5889987642 233444555555542 24443310 0 011114567899999
Q ss_pred CCCCChh--------------hhhhhcCC----C-------CCCCHHHH-------------------------------
Q 008031 366 MPHGSLA--------------TFLHARGP----E-------TPIDWPTR------------------------------- 389 (580)
Q Consensus 366 ~~~g~L~--------------~~l~~~~~----~-------~~~~~~~~------------------------------- 389 (580)
++|.++. ..+|.... . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 11121110 0 00122211
Q ss_pred HHHHHHHHHHHHHhhc------------CCCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 390 MKIIKGMTRGLLHLHS------------NENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 390 ~~i~~~i~~~l~~LH~------------~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
..+..++..++.+|+. ..+++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345555541 2589999999999999877889999999763
No 423
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.94 E-value=4.7e-05 Score=77.43 Aligned_cols=130 Identities=15% Similarity=0.156 Sum_probs=90.4
Q ss_pred ccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccCC
Q 008031 16 ASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHN 95 (580)
Q Consensus 16 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 95 (580)
..+.++..|+.+.+..+... +....|..+..|+.+.+..+.+. ...|..+.+|+.+.+.++ ++.+....|..+.+
T Consensus 247 ~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~ 321 (394)
T 4fs7_A 247 SVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTS 321 (394)
T ss_dssp STTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTT
T ss_pred ccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCC
Confidence 34556666677766666544 45556666677777766655433 245677788888888654 66666777888888
Q ss_pred CCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccc
Q 008031 96 LSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYN 152 (580)
Q Consensus 96 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n 152 (580)
|+.++|..+ ++.+....|.+|.+|+.++|..| ++......|.++++|+.+++..+
T Consensus 322 L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 322 LVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 888888644 66566677888888888888766 66455677888888888887644
No 424
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.92 E-value=4.9e-05 Score=77.27 Aligned_cols=136 Identities=15% Similarity=0.137 Sum_probs=108.0
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCC
Q 008031 3 LALQYNNLSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82 (580)
Q Consensus 3 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 82 (580)
+.+..+... .....|.++..++.+.+..+.+. ...|..+.+|+.+.+..+ ++..-...|.++.+|+.++|.++ +
T Consensus 258 ~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 258 ISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp EEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C
T ss_pred EEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-c
Confidence 344444333 55677889999999999887654 357888999999999865 66566678999999999999754 8
Q ss_pred CcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCee
Q 008031 83 DDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSF 147 (580)
Q Consensus 83 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l 147 (580)
+.+....|..+.+|+.+.+..| ++.+....|.+|.+|+.++|..+ ++ .+...|.++++|+.+
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 7888889999999999999877 77677888999999999999866 33 345678888887754
No 425
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.91 E-value=4.9e-05 Score=76.78 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=100.1
Q ss_pred cccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhccC
Q 008031 15 PASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLH 94 (580)
Q Consensus 15 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 94 (580)
...+..+.+|+.+.+..+ ++.+....|..+.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++.+....|..+.
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 345566777888887655 33355667788888888888766 55455667888888888888654 6666667788888
Q ss_pred CCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCCCeeecccc
Q 008031 95 NLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSLSSFNVSYN 152 (580)
Q Consensus 95 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~l~l~~n 152 (580)
+|+.+.+.++.++.+....|.++.+|+.++|..+ ++.....+|.++.+|+.+.+..+
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 9999998888887677777888889999988755 65455677888888888877544
No 426
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.84 E-value=4.9e-05 Score=76.79 Aligned_cols=127 Identities=13% Similarity=0.148 Sum_probs=103.8
Q ss_pred cccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCCCcccchhhhc
Q 008031 13 RIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNLDDQILDSLDK 92 (580)
Q Consensus 13 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 92 (580)
.....+.++.+|+.+.+..+ ++.+....|..+.+|+.+.+..+ ++......|.++.+|+.+.+.++.++.+....|..
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 44567888999999999877 66566788999999999999754 66455678999999999999999998888889999
Q ss_pred cCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCC
Q 008031 93 LHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKS 143 (580)
Q Consensus 93 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 143 (580)
+.+|+.+.|..+ ++.+....|.+|.+|+.+.|..+ ++..-..+|.+++.
T Consensus 309 c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 309 CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 999999999765 77677778999999999999765 65444566776643
No 427
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.80 E-value=0.00015 Score=73.55 Aligned_cols=83 Identities=12% Similarity=0.229 Sum_probs=40.4
Q ss_pred cCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccccccCCccccCCCCCcEEEccccccCCcccccccCcCCC
Q 008031 65 SFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQISGHIPSTIGNISTLTILDLSQNKLSGEIPASFSNLKSL 144 (580)
Q Consensus 65 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L 144 (580)
.|.++..|+.+.+.++.. .+....|..+.+|+.+.+. +.++.+....|..+.+|+.++|..+ ++......|.++.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 344555555555543332 3334445555555555553 3344344444555555555555443 332334455555555
Q ss_pred Ceeecc
Q 008031 145 SSFNVS 150 (580)
Q Consensus 145 ~~l~l~ 150 (580)
+.+.+.
T Consensus 337 ~~i~ip 342 (394)
T 4gt6_A 337 ERIAIP 342 (394)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 555553
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.78 E-value=6.4e-06 Score=73.88 Aligned_cols=113 Identities=13% Similarity=0.207 Sum_probs=65.2
Q ss_pred cCCCCCCEEEeeCC-cCCC----CCCccCcCCCCCCEEECcCCCCCcccch----hhhccCCCCeeeecccccccc----
Q 008031 43 GRLSRLRILDFSYN-AING----SLPASFSNLSSLVSLTLESNNLDDQILD----SLDKLHNLSVLNLKRNQISGH---- 109 (580)
Q Consensus 43 ~~l~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~~~---- 109 (580)
.+-+.|+.|+|++| +|.. .+...+..-..|+.|+|++|+|+..... .+..-..|+.|+|++|.|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34456666666654 5542 2233444455666667766666543322 233445677777777776542
Q ss_pred CCccccCCCCCcEEEcccc---ccCC----cccccccCcCCCCeeecccccCc
Q 008031 110 IPSTIGNISTLTILDLSQN---KLSG----EIPASFSNLKSLSSFNVSYNNLS 155 (580)
Q Consensus 110 ~~~~~~~l~~L~~L~l~~N---~l~~----~~~~~l~~l~~L~~l~l~~n~l~ 155 (580)
+...+..-+.|++|+|++| .+.. .+...+..-+.|..|+++.|.+.
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2223444567888888765 3332 23455666788888888877654
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.73 E-value=9.2e-06 Score=72.85 Aligned_cols=86 Identities=17% Similarity=0.222 Sum_probs=38.9
Q ss_pred cCCCCCcEEEccCC-ccCC----CCCccccCCCCCCEEEeeCCcCCC----CCCccCcCCCCCCEEECcCCCCCcccch-
Q 008031 19 GKLSELQEISLSHN-KISG----VMPSDLGRLSRLRILDFSYNAING----SLPASFSNLSSLVSLTLESNNLDDQILD- 88 (580)
Q Consensus 19 ~~l~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~- 88 (580)
.+-+.|++|+|++| .|.. .+.+.+...+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|.|+.....
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 33445555555553 4431 123334444555555555555542 1222233334555555555555432222
Q ss_pred ---hhhccCCCCeeeeccc
Q 008031 89 ---SLDKLHNLSVLNLKRN 104 (580)
Q Consensus 89 ---~~~~l~~L~~L~l~~N 104 (580)
.+..-..|++|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 2223334555555543
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.66 E-value=0.00019 Score=69.45 Aligned_cols=75 Identities=17% Similarity=0.253 Sum_probs=55.6
Q ss_pred hccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCC---CcceeeeeEEECCCCcEEEEEeeCCC
Q 008031 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRH---PNLLALRAYYLGPKGEKLLVFDYMPH 368 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~~~~~~lv~e~~~~ 368 (580)
.+.+|.|..+.||+....+|+.|++|+-..........|..|+..|+.|.- -.+.+++++. ..++||||+++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~-----~~~lv~e~l~~ 94 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEEECCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc-----CceEEEEeecc
Confidence 466899999999999999999999998765544444568899999988842 2344444432 34789999987
Q ss_pred CCh
Q 008031 369 GSL 371 (580)
Q Consensus 369 g~L 371 (580)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 754
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.56 E-value=0.00053 Score=66.81 Aligned_cols=135 Identities=17% Similarity=0.166 Sum_probs=89.1
Q ss_pred ccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCC---CCcceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIR---HPNLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
+.|+.|.+..+|+.... +..+++|+.... ....+..|++.|+.+. ...+.+++.++.. .+..++||||+++.
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-QGHSFLLLEALNKS 116 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-SSEEEEEEECCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-CCceEEEEEeccCC
Confidence 56889999999998864 678888876532 3456888999998883 3567888888765 56799999999988
Q ss_pred Chhh-----------hhhhcCCCC-------------------CCCHHHHH---HHH----------------HHHHHH-
Q 008031 370 SLAT-----------FLHARGPET-------------------PIDWPTRM---KII----------------KGMTRG- 399 (580)
Q Consensus 370 ~L~~-----------~l~~~~~~~-------------------~~~~~~~~---~i~----------------~~i~~~- 399 (580)
.+.. .+|...... .-+|.+.. ++. .++...
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 123322100 11344321 111 111111
Q ss_pred HHHhhc---CCCcccCCCCCCCeeeCCCCCeEEeecc
Q 008031 400 LLHLHS---NENIIHGNLTSSNVLLDDSTNAKISDFG 433 (580)
Q Consensus 400 l~~LH~---~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg 433 (580)
...|.. .+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 233421 25799999999999999877 8899974
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.54 E-value=0.00037 Score=71.32 Aligned_cols=79 Identities=14% Similarity=0.192 Sum_probs=46.4
Q ss_pred CCcccCCCCCCCeeeCCCCCeEEeecccccccccccccceeeecCccccCCccccccC---CCCCcccchhHHHHHHHHH
Q 008031 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLK---KANTKTDVYSLGVTILELL 483 (580)
Q Consensus 407 ~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~~l~el~ 483 (580)
+.++|+|+++.||+++.++ ++++||+.+..-.........-..-...|++|+..... .-....++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999776 99999998764322111100000001235666544311 1112345557777777777
Q ss_pred cCC
Q 008031 484 TGK 486 (580)
Q Consensus 484 tg~ 486 (580)
++.
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.15 E-value=0.00084 Score=65.26 Aligned_cols=136 Identities=13% Similarity=0.085 Sum_probs=73.4
Q ss_pred hccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCcc-eeeeeEEECCCCcEEEEEeeC-CCC
Q 008031 292 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPNL-LALRAYYLGPKGEKLLVFDYM-PHG 369 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~lv~e~~-~~g 369 (580)
.+.|+.|....+|+. ..+++|+....... .....+|+.+++.+....+ .+++++. .+.-++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~---~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD---PATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC---TTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE---CCCCEEEEeecCCCc
Confidence 366888999999998 55888877543211 1123567777777642222 3455443 33457899999 654
Q ss_pred Chhhh------------------hhhcCCCC--CCCH-HHHHH---------------------HHHHHHHHHHHhhcCC
Q 008031 370 SLATF------------------LHARGPET--PIDW-PTRMK---------------------IIKGMTRGLLHLHSNE 407 (580)
Q Consensus 370 ~L~~~------------------l~~~~~~~--~~~~-~~~~~---------------------i~~~i~~~l~~LH~~~ 407 (580)
++... +|...... ..+. ..... .+..+...+.-.....
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 173 (301)
T 3dxq_A 94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL 173 (301)
T ss_dssp ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 44310 11111100 0111 11111 1111111111111124
Q ss_pred CcccCCCCCCCeeeCCCCCeEEeecccccc
Q 008031 408 NIIHGNLTSSNVLLDDSTNAKISDFGLSRL 437 (580)
Q Consensus 408 ~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~ 437 (580)
.++|+|+.+.||+ ..++.+.++||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 5899999999999 5566789999997753
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.08 E-value=0.0029 Score=62.14 Aligned_cols=139 Identities=18% Similarity=0.195 Sum_probs=79.2
Q ss_pred cccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCC--CcceeeeeE----EECCCCcEEEEEeeCC
Q 008031 294 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRH--PNLLALRAY----YLGPKGEKLLVFDYMP 367 (580)
Q Consensus 294 ~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~----~~~~~~~~~lv~e~~~ 367 (580)
.++ |....||+....+|+.+++|...... .....+..|+.+++.+.. -.+.+++.. +....+..+++|||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 455 77789999887777789999876332 234566778888877732 123444432 0001345678999998
Q ss_pred CCChhh-----h---------hhhcC------CCCCCCHHHH----------------------HHHHHHHHHHHHHhh-
Q 008031 368 HGSLAT-----F---------LHARG------PETPIDWPTR----------------------MKIIKGMTRGLLHLH- 404 (580)
Q Consensus 368 ~g~L~~-----~---------l~~~~------~~~~~~~~~~----------------------~~i~~~i~~~l~~LH- 404 (580)
|..+.. + +|... .....++... ...+.+++..+.-+-
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 754321 0 11110 0111222211 111112222222211
Q ss_pred --cCCCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 405 --SNENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 405 --~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
....++|+|+++.||+++ + .+.++||+.+.
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 114689999999999999 4 89999998764
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.06 E-value=0.0035 Score=61.78 Aligned_cols=139 Identities=12% Similarity=0.141 Sum_probs=71.0
Q ss_pred ccccccCceE-EEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCC-C-CcceeeeeEEECCCCcEEEEEeeCCCC
Q 008031 293 EIMGKSTYGT-VYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIR-H-PNLLALRAYYLGPKGEKLLVFDYMPHG 369 (580)
Q Consensus 293 ~~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~niv~~~~~~~~~~~~~~lv~e~~~~g 369 (580)
+.|+.|+... +|+....+|..+++|....... ..+..|+.+++.+. + -.+.+++.+... .+ +++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~-~g--~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHA-RG--LLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETT-TT--EEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCC-CC--EEEEeeCCCc
Confidence 4455555544 6677654467777776433211 23445666666663 2 234556665322 22 7899999776
Q ss_pred Chhhhhhhc---------------------CC--CCCCCHHHHH-------HH-------------HHHHHHHHHHh---
Q 008031 370 SLATFLHAR---------------------GP--ETPIDWPTRM-------KI-------------IKGMTRGLLHL--- 403 (580)
Q Consensus 370 ~L~~~l~~~---------------------~~--~~~~~~~~~~-------~i-------------~~~i~~~l~~L--- 403 (580)
.+.+++... .. ...++..... .+ ...+...++.+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 665443221 00 0112211110 00 00111122222
Q ss_pred --hcCCCcccCCCCCCCeeeCCC----CCeEEeecccccc
Q 008031 404 --HSNENIIHGNLTSSNVLLDDS----TNAKISDFGLSRL 437 (580)
Q Consensus 404 --H~~~~i~H~Dlk~~Nil~~~~----~~~kl~Dfg~~~~ 437 (580)
.....++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 112479999999999999874 6789999998754
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.00098 Score=55.67 Aligned_cols=55 Identities=15% Similarity=0.217 Sum_probs=29.8
Q ss_pred EEEccCCccC-CCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcCCCC
Q 008031 26 EISLSHNKIS-GVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLESNNL 82 (580)
Q Consensus 26 ~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 82 (580)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5666666665 12333221 2566666666666644444555566666666666655
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.04 E-value=0.0019 Score=66.15 Aligned_cols=72 Identities=10% Similarity=0.150 Sum_probs=49.1
Q ss_pred ccccccCceEEEEEEeCC--------CCEEEEEEccccccccHHHHHHHHHHHhcCCCCc-ceeeeeEEECCCCcEEEEE
Q 008031 293 EIMGKSTYGTVYKATLED--------GSQVAVKRLREKITKGQREFESEVSLLGKIRHPN-LLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~~lv~ 363 (580)
+.|+.|....||++...+ +..+++|+.... .....+.+|+.+++.+...+ ..++++.+. + .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~---g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G---GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T---EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C---CEEE
Confidence 567888899999998753 578999987432 11245567999988884333 356666552 2 3899
Q ss_pred eeCCCCCh
Q 008031 364 DYMPHGSL 371 (580)
Q Consensus 364 e~~~~g~L 371 (580)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.02 E-value=0.0012 Score=55.18 Aligned_cols=55 Identities=29% Similarity=0.382 Sum_probs=29.9
Q ss_pred EEEeeCCcCC-CCCCccCcCCCCCCEEECcCCCCCcccchhhhccCCCCeeeeccccc
Q 008031 50 ILDFSYNAIN-GSLPASFSNLSSLVSLTLESNNLDDQILDSLDKLHNLSVLNLKRNQI 106 (580)
Q Consensus 50 ~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 106 (580)
.++.++++++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5666666665 23443322 2466666666666555555555555555555555544
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.00 E-value=0.0012 Score=66.09 Aligned_cols=138 Identities=16% Similarity=0.206 Sum_probs=81.6
Q ss_pred ccccccCceEEEEEEeC--------CCCEEEEEEccccccccHHHHHHHHHHHhcCC-CCcceeeeeEEECCCCcEEEEE
Q 008031 293 EIMGKSTYGTVYKATLE--------DGSQVAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~ 363 (580)
+.+..|....+|+.... +++.+++|+... .......+.+|.++++.+. +.-..++++++. + .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~---g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFP--E---GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---ccEE
Confidence 45677888889998864 257899998633 2233456678999998884 333355666653 2 2899
Q ss_pred eeCCCCChhhh-----------------hhhcCC--CCCCC--HHHHHHHHHHHHH-------------------HHHH-
Q 008031 364 DYMPHGSLATF-----------------LHARGP--ETPID--WPTRMKIIKGMTR-------------------GLLH- 402 (580)
Q Consensus 364 e~~~~g~L~~~-----------------l~~~~~--~~~~~--~~~~~~i~~~i~~-------------------~l~~- 402 (580)
||++|.+|..- +|.... ..... +.++.++..++.. .+..
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655421 111110 11122 4555555544422 1222
Q ss_pred ---hhc---CCCcccCCCCCCCeeeCCC----CCeEEeeccccc
Q 008031 403 ---LHS---NENIIHGNLTSSNVLLDDS----TNAKISDFGLSR 436 (580)
Q Consensus 403 ---LH~---~~~i~H~Dlk~~Nil~~~~----~~~kl~Dfg~~~ 436 (580)
|.. ...++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 221 1368999999999999876 689999999775
No 440
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.91 E-value=0.0013 Score=64.51 Aligned_cols=141 Identities=9% Similarity=0.137 Sum_probs=76.1
Q ss_pred ccccccCceEEEEEEeCCCCEEEEEEccccccccHHHHHHHHHHHhcCCCCc--ceeeeeEE-----ECCCCcEEEEEee
Q 008031 293 EIMGKSTYGTVYKATLEDGSQVAVKRLREKITKGQREFESEVSLLGKIRHPN--LLALRAYY-----LGPKGEKLLVFDY 365 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~-----~~~~~~~~lv~e~ 365 (580)
+.|+.|....+|+....+| .+++|...... ....+..|+.+++.+.... +.+++... ....+..+++|+|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 5577788899999987755 57788876521 2234566777777663211 22332210 0013467899999
Q ss_pred CCCCChhh--------------hhhhcCCC---C---CC---CHHHHHH------------HHHHHHHHHHHhhc-----
Q 008031 366 MPHGSLAT--------------FLHARGPE---T---PI---DWPTRMK------------IIKGMTRGLLHLHS----- 405 (580)
Q Consensus 366 ~~~g~L~~--------------~l~~~~~~---~---~~---~~~~~~~------------i~~~i~~~l~~LH~----- 405 (580)
++|..+.. .+|..... . .. .|..... +...+...+++++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 99865421 01211100 0 01 1222100 00113334444431
Q ss_pred -CCCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 406 -NENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 406 -~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
..+++|+|+++.||+++.+..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 1479999999999999876555799998764
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.85 E-value=0.012 Score=53.05 Aligned_cols=102 Identities=16% Similarity=0.100 Sum_probs=66.5
Q ss_pred ChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeecccccccccccccceeee
Q 008031 370 SLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSRLMTAAANVNVIAT 449 (580)
Q Consensus 370 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 449 (580)
+|.+.|... .+++++++++.++.|.+.+|.-+-..+.-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 34 SL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 789999877 478999999999999999987661101111233456889999999888764 2111
Q ss_pred cCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCC
Q 008031 450 AGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSP 488 (580)
Q Consensus 450 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p 488 (580)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0112366888763 3445678899999999998875444
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.51 E-value=0.0054 Score=61.38 Aligned_cols=73 Identities=8% Similarity=0.106 Sum_probs=43.6
Q ss_pred ccccccCceEEEEEEeCC---------CCEEEEEEccccccccHHHHHHHHHHHhcCCCCc-ceeeeeEEECCCCcEEEE
Q 008031 293 EIMGKSTYGTVYKATLED---------GSQVAVKRLREKITKGQREFESEVSLLGKIRHPN-LLALRAYYLGPKGEKLLV 362 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~~lv 362 (580)
+.++.|....+|+....+ +..+++|+....... ......|..+++.+...+ +.++++.. . -++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~---~--~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF---N--GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE---T--TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec---C--CcEE
Confidence 567788888999998753 268888886543221 112457888888774333 34565543 2 2689
Q ss_pred EeeCCCCCh
Q 008031 363 FDYMPHGSL 371 (580)
Q Consensus 363 ~e~~~~g~L 371 (580)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.32 E-value=0.018 Score=59.24 Aligned_cols=73 Identities=11% Similarity=0.108 Sum_probs=47.0
Q ss_pred ccccccCceEEEEEEeCC-CCEEEEEEccccccccHHHHHHHHHHHhcCCCCcc-eeeeeEEECCCCcEEEEEeeCCCCC
Q 008031 293 EIMGKSTYGTVYKATLED-GSQVAVKRLREKITKGQREFESEVSLLGKIRHPNL-LALRAYYLGPKGEKLLVFDYMPHGS 370 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~lv~e~~~~g~ 370 (580)
+.|+.|-...+|+....+ +..+++|+...... ..-+..+|..+++.+...++ .++++++ . + .+||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~-~-~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFF-T-N---GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEE-T-T---EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEe-C-C---eEEEEeeCCcc
Confidence 567888899999998874 47888888643321 11122578888888864444 4566665 2 2 25999998754
Q ss_pred h
Q 008031 371 L 371 (580)
Q Consensus 371 L 371 (580)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.96 E-value=0.032 Score=54.93 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=27.2
Q ss_pred CCcccCCCCCCCeeeCCCCCeEEeecccccc
Q 008031 407 ENIIHGNLTSSNVLLDDSTNAKISDFGLSRL 437 (580)
Q Consensus 407 ~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~~ 437 (580)
..++|+|+.+.||++++++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999878899999987653
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.58 E-value=0.031 Score=56.16 Aligned_cols=139 Identities=17% Similarity=0.202 Sum_probs=80.5
Q ss_pred ccccccCceEEEEEEeCC--------CCEEEEEEccccccc------------------cHHHHHHHHHHHhcCC-CCcc
Q 008031 293 EIMGKSTYGTVYKATLED--------GSQVAVKRLREKITK------------------GQREFESEVSLLGKIR-HPNL 345 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~-h~ni 345 (580)
+.|..|-...+|++...+ +..|.+++.-..... ..+.+..|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988753 367888876432211 0112335888888884 4445
Q ss_pred eeeeeEEECCCCcEEEEEeeCCCCChhh--hh---------------hhcCC--CCCCC--HHHHHHHHHHHH-------
Q 008031 346 LALRAYYLGPKGEKLLVFDYMPHGSLAT--FL---------------HARGP--ETPID--WPTRMKIIKGMT------- 397 (580)
Q Consensus 346 v~~~~~~~~~~~~~~lv~e~~~~g~L~~--~l---------------~~~~~--~~~~~--~~~~~~i~~~i~------- 397 (580)
.++++++. + .+|+||++|-+|.. +. |.... ..... +..+.++..++.
T Consensus 138 Pkl~~~~~--~---G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 138 PKLYGIFP--Q---GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp CCEEEEET--T---EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CeEEEEeC--C---CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 56666653 2 28999999755432 10 11100 11122 234444443321
Q ss_pred ---------------HHH----HHhhc---CCCcccCCCCCCCeeeCCC------CCeEEeeccccc
Q 008031 398 ---------------RGL----LHLHS---NENIIHGNLTSSNVLLDDS------TNAKISDFGLSR 436 (580)
Q Consensus 398 ---------------~~l----~~LH~---~~~i~H~Dlk~~Nil~~~~------~~~kl~Dfg~~~ 436 (580)
..+ .+|.. ...++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22222 1368999999999999876 789999998764
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.44 E-value=0.048 Score=55.24 Aligned_cols=73 Identities=4% Similarity=0.066 Sum_probs=47.4
Q ss_pred ccccccCceEEEEEEeCC--------CCEEEEEEccccccccHHHHHHHHHHHhcCC-CCcceeeeeEEECCCCcEEEEE
Q 008031 293 EIMGKSTYGTVYKATLED--------GSQVAVKRLREKITKGQREFESEVSLLGKIR-HPNLLALRAYYLGPKGEKLLVF 363 (580)
Q Consensus 293 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~ 363 (580)
+.+..|....+|+....+ +..+++|+..... ...-+..+|.++++.+. +.-..++++.+ . -++||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~---~--~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF---P--EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE---T--TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc---C--CCEEE
Confidence 556778888999998763 5789998864432 11123457888888774 33344555533 1 26899
Q ss_pred eeCCCCCh
Q 008031 364 DYMPHGSL 371 (580)
Q Consensus 364 e~~~~g~L 371 (580)
||++|.+|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.27 E-value=0.24 Score=49.85 Aligned_cols=30 Identities=23% Similarity=0.398 Sum_probs=25.0
Q ss_pred CcccCCCCCCCeee------CCCCCeEEeecccccc
Q 008031 408 NIIHGNLTSSNVLL------DDSTNAKISDFGLSRL 437 (580)
Q Consensus 408 ~i~H~Dlk~~Nil~------~~~~~~kl~Dfg~~~~ 437 (580)
.++|+|+.+.||++ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998753
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.04 E-value=0.21 Score=31.99 Aligned_cols=10 Identities=10% Similarity=0.032 Sum_probs=4.0
Q ss_pred HHhhhhhhcc
Q 008031 224 ILMCCLIRKR 233 (580)
Q Consensus 224 ~~~~~~~r~r 233 (580)
.++++++||+
T Consensus 30 ~~~~~~RRr~ 39 (44)
T 2ks1_B 30 GIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHhhhhH
Confidence 3334444443
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.88 E-value=0.25 Score=31.55 Aligned_cols=10 Identities=20% Similarity=0.245 Sum_probs=4.0
Q ss_pred Hhhhhhhccc
Q 008031 225 LMCCLIRKRT 234 (580)
Q Consensus 225 ~~~~~~r~r~ 234 (580)
++++++||+.
T Consensus 30 ~~~~~RRRr~ 39 (44)
T 2l2t_A 30 FAVYVRRKSI 39 (44)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHhhhhhh
Confidence 3344444433
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.82 E-value=0.24 Score=31.54 Aligned_cols=17 Identities=24% Similarity=0.653 Sum_probs=6.6
Q ss_pred HHHHHHHHhhhhhhccc
Q 008031 218 LLIIVCILMCCLIRKRT 234 (580)
Q Consensus 218 ~~~~~~~~~~~~~r~r~ 234 (580)
+++++.+.+.++.|||+
T Consensus 23 l~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 23 LVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhheehhh
Confidence 33333333333444433
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.12 E-value=4.8 Score=36.13 Aligned_cols=114 Identities=11% Similarity=0.111 Sum_probs=76.7
Q ss_pred CCCcceeeeeEEECCCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHH-HhhcCCCcccCCCCCCCe
Q 008031 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLL-HLHSNENIIHGNLTSSNV 419 (580)
Q Consensus 341 ~h~niv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~-~LH~~~~i~H~Dlk~~Ni 419 (580)
.||++ . ..+-.+ ++.+.+.++.-+++.-...++ .++...+++++.+|+.... +++ .-+|--++|+|+
T Consensus 48 ~~~~f-~-~~I~~~-eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~---~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI-V-RDIDVS-EDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSA---RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS-E-EEEEEC-SSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCS---SSEECCCCGGGE
T ss_pred cCCCC-C-eEEEEe-CCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhh---CceeEEEeCceE
Confidence 57777 2 223333 556777777654443333443 3778899999999998776 554 357788999999
Q ss_pred eeCCCCCeEEeecccccccccccccceeeecCccccCCccccccCCCCCccc-chhHHHHHHHHHcCCCCCC
Q 008031 420 LLDDSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTD-VYSLGVTILELLTGKSPGE 490 (580)
Q Consensus 420 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~D-v~s~G~~l~el~tg~~p~~ 490 (580)
+++.++.+++.-.|+-. -++|.-+. ..| .-.+=+++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~------------------~lpP~e~~------ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKE------------------SLPPDEWD------DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETT------------------TBSSCSCC------HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCcc------------------cCCCCCCC------HHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999998777543 23333221 122 3357788888999988774
No 452
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=81.39 E-value=0.83 Score=28.23 Aligned_cols=21 Identities=29% Similarity=0.346 Sum_probs=9.4
Q ss_pred CCCCcceeeehhHHHHHHHHH
Q 008031 200 KLSTKDIILIGAGALLIVLLI 220 (580)
Q Consensus 200 ~~~~~~~~~i~~~~~~~~~~~ 220 (580)
..+...+..+++++++.++++
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li 27 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALL 27 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeeehHHHHHHHHH
Confidence 344444544444444444333
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.70 E-value=3.8 Score=36.69 Aligned_cols=116 Identities=7% Similarity=0.031 Sum_probs=77.4
Q ss_pred CCCcceeeeeEEECCCCcEEEEEeeCCCCChhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCee
Q 008031 341 RHPNLLALRAYYLGPKGEKLLVFDYMPHGSLATFLHARGPETPIDWPTRMKIIKGMTRGLLHLHSNENIIHGNLTSSNVL 420 (580)
Q Consensus 341 ~h~niv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~i~H~Dlk~~Nil 420 (580)
.||+.+.. .+-.+ ++.+.+.++.-+ +..+|-.-+ ..+...+++++.+|+....+++. =+|--++|+|++
T Consensus 43 ~~~~Fl~~-~I~e~-eD~v~~~y~~~~--~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~~---r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTEL-RDSFQIHYDIND--NHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNRT---RYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEEC-SSEEEEEECCCT--TSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGGS---SEECCCSGGGEE
T ss_pred cCCcccce-EEEEc-ccEEEEEEEcCc--ccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhcC---ceEEEEecceEE
Confidence 67888766 34443 446666665543 333333222 36788999999999988766653 467889999999
Q ss_pred eCCCCCeEEeecccccccccccccceeeecCccccCCccccccCCCCCcccchhHHHHHHHHHcCCCCCC
Q 008031 421 LDDSTNAKISDFGLSRLMTAAANVNVIATAGALGYRAPELSKLKKANTKTDVYSLGVTILELLTGKSPGE 490 (580)
Q Consensus 421 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~ 490 (580)
++.++.+++.--|+-.. ++|.- .+...=.-.+=+++..+++++..|+
T Consensus 112 f~~~~~p~i~~RGik~~------------------l~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNV------------------VDPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECTTSCEEESCCEETTT------------------BSCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EcCCCCEEEEEccCccC------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999987775432 22221 1112223457888999999999875
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.87 E-value=0.23 Score=51.01 Aligned_cols=60 Identities=13% Similarity=0.126 Sum_probs=17.9
Q ss_pred hccccccCceEEEEEEeCC-CCEEEE------EEcccccc--ccHHHHHHHHHHHhcCCCCcceeeeeEEEC
Q 008031 292 AEIMGKSTYGTVYKATLED-GSQVAV------KRLREKIT--KGQREFESEVSLLGKIRHPNLLALRAYYLG 354 (580)
Q Consensus 292 ~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 354 (580)
.+.+| ||.||+|.+.. ..+||| |..+.... +....+.+|..+++.++|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 35566 99999999863 467888 76654322 223468889999999999999999888754
No 455
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=67.65 E-value=4.1 Score=25.94 Aligned_cols=30 Identities=27% Similarity=0.294 Sum_probs=18.8
Q ss_pred eeeehhHHHHHHHHHHHHHHhhhhhhcccc
Q 008031 206 IILIGAGALLIVLLIIVCILMCCLIRKRTA 235 (580)
Q Consensus 206 ~~~i~~~~~~~~~~~~~~~~~~~~~r~r~~ 235 (580)
+...++|+++++++.+.+++++.++|.+++
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~~k 43 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQKIR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhhhcc
Confidence 344445566777777676677777765553
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=66.16 E-value=2.6 Score=25.31 Aligned_cols=23 Identities=22% Similarity=0.444 Sum_probs=8.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhc
Q 008031 210 GAGALLIVLLIIVCILMCCLIRK 232 (580)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~r~ 232 (580)
+++++.+++++++...+..+.||
T Consensus 11 aagVvglll~vii~l~~~~~iRR 33 (35)
T 1iij_A 11 IATVVGVLLFLILVVVVGILIKR 33 (35)
T ss_dssp HHHHHHHHHHHHHTTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHhheEEee
Confidence 33333333333333333333333
No 457
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=65.38 E-value=3.9 Score=28.25 Aligned_cols=7 Identities=29% Similarity=0.349 Sum_probs=2.9
Q ss_pred HHHHHHH
Q 008031 219 LIIVCIL 225 (580)
Q Consensus 219 ~~~~~~~ 225 (580)
+..++++
T Consensus 23 ~~glcI~ 29 (70)
T 2klu_A 23 FIGLGIF 29 (70)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3344444
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=57.00 E-value=25 Score=26.98 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=23.2
Q ss_pred ccccccccccCCCCCcEEEccCCccCCCCCccccCCCCCCEEEeeC
Q 008031 10 LSGRIPASLGKLSELQEISLSHNKISGVMPSDLGRLSRLRILDFSY 55 (580)
Q Consensus 10 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 55 (580)
++.+-...|.++.+|+.+.|-.+ ++.+-...|..+.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34333445555566666655544 2334445555555555555544
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=55.91 E-value=27 Score=26.81 Aligned_cols=46 Identities=22% Similarity=0.203 Sum_probs=25.9
Q ss_pred ccCCCCCccccCCCCCCEEEeeCCcCCCCCCccCcCCCCCCEEECcC
Q 008031 33 KISGVMPSDLGRLSRLRILDFSYNAINGSLPASFSNLSSLVSLTLES 79 (580)
Q Consensus 33 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 79 (580)
.++.+....|..+++|+.+.|..+ ++.+-...|.++.+|+.+.+.+
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444556666666666666544 3334445566666666666654
No 460
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=56.60 E-value=3.2 Score=25.37 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHhhhhhhc
Q 008031 214 LLIVLLIIVCILMCCLIRK 232 (580)
Q Consensus 214 ~~~~~~~~~~~~~~~~~r~ 232 (580)
.++++++.++++++.|++|
T Consensus 17 l~vi~iisLIiLi~~w~qK 35 (39)
T 2l6w_A 17 LVVLTIISLIILIMLWQKK 35 (39)
Confidence 3333334444444444443
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=32.01 E-value=1.9e+02 Score=30.25 Aligned_cols=46 Identities=17% Similarity=0.154 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHH--HHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 386 WPTRMKIIKGMT--RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 386 ~~~~~~i~~~i~--~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
+..+..++.++| ..+.|+= || +|=+++|||++.+|++.=+|||..-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL---Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL---GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee---ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 455666666655 2355663 33 6789999999999999999999863
No 462
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=29.72 E-value=91 Score=33.24 Aligned_cols=45 Identities=22% Similarity=0.154 Sum_probs=32.5
Q ss_pred HHHHHHHHHHH--HHHHHhhcCCCcccCCCCCCCeeeCCCCCeEEeeccccc
Q 008031 387 PTRMKIIKGMT--RGLLHLHSNENIIHGNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 387 ~~~~~i~~~i~--~~l~~LH~~~~i~H~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
..+..++.++| ..+.|+= | -+|=+++|||++.+|++.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL---G--lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL---G--VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---T--CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc---c--CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 34556666555 2345552 2 27889999999999999999999863
No 463
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=27.22 E-value=38 Score=19.88 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHhhhhhhc
Q 008031 215 LIVLLIIVCILMCCLIRK 232 (580)
Q Consensus 215 ~~~~~~~~~~~~~~~~r~ 232 (580)
++|+++++.-.+.+|+.+
T Consensus 16 l~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 16 LVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCceeEEEccc
Confidence 334444444344444433
No 464
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=21.65 E-value=59 Score=36.20 Aligned_cols=25 Identities=24% Similarity=0.421 Sum_probs=22.5
Q ss_pred CCCCCCCeeeCCCCCeEEeeccccc
Q 008031 412 GNLTSSNVLLDDSTNAKISDFGLSR 436 (580)
Q Consensus 412 ~Dlk~~Nil~~~~~~~kl~Dfg~~~ 436 (580)
+|=+++|||++.+|++.=+|||.+-
T Consensus 804 gDRH~~NILid~tG~v~HIDFG~~f 828 (961)
T 1e7u_A 804 GDRHNDNIMISETGNLFHIDFGHIL 828 (961)
T ss_dssp CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred cCCCCcceEEecCCCEEEEeehhhh
Confidence 7889999999999999999999864
Done!